Psyllid ID: psy7062

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------15
Protein Sequence
MVAALGGILTAFGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLCFIQQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTLVKPQVTRAKE
Secondary Structure (PSIPRED)
ccccccccccccccEEEEEEccccccEEEEEccccEEEEEEccccccccEEEEccccccEEEEEEcccccEEEEEcccccEEEEEccccccccEEEEEEcccccEEEEEccccccccccEEEEEEcccccEEEEcccEEccEEEEEcc
Secondary Structure Prediction (SSPRO)
cccEcccccccccEEEEEEccccHHEEEEEEcccccEEEEEEcccccccEEEEEcccccEEEEEEcccccEEEEEccccEEEEEEEcccccEEEEEEEEcccccEEEEEccccEEEcccEEEEEcccccEEEEEcHHccccEEEcccc
Coil and Loop (DISEMBL)
MVAALGGILTAFGQISTVFDSKHLVEMVAALGGyqhirmydfgsnnpnpvincegvsknVVEVGfqedgkwmftggedCRARIWDLSLCFIQQVnalritpdkQLLASAEELSCCYCGAAVFVYNSCYpaavvasntlvkpqvtrake
Flexible Loop (DISEMBL)
MVAALGGILTAFGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLCFIQQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASntlvkpqvtrake
Low Complexity Region (SEG)
MVAALGGILTAFGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLCFIQQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTLVKPQVTRAKE
Disordered region (IsUnstruct)
***ALGGILTAFGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLCFIQQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTLV*********
Disordered Region (DISOPRED)
***ALG*ILTAFGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLCFIQQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTLV*********
Disordered Region (DISEMBL)
MVAALGGILTAFGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLCFIQQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTLVKPQVTRAKE
Disordered Region (DISPRO)
*V**LGGILTAFGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLCFIQQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTLVKPQVTR***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MVAALGGILTAFGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLCFIQQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTLVKPQVTRAKE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	148	2.2.26 [Sep-21-2011]
Q6PA72	326	Target of rapamycin compl	N/A	N/A	0.466	0.211	0.68	2e-23
Q5I0B4	326	Target of rapamycin compl	yes	N/A	0.466	0.211	0.68	2e-23
Q803V5	326	Target of rapamycin compl	yes	N/A	0.466	0.211	0.68	2e-23
Q9DCJ1	326	Target of rapamycin compl	yes	N/A	0.466	0.211	0.653	1e-22
Q9Z2K5	326	Target of rapamycin compl	yes	N/A	0.466	0.211	0.653	1e-22
Q17QU5	326	Target of rapamycin compl	yes	N/A	0.466	0.211	0.653	2e-22
Q9BVC4	326	Target of rapamycin compl	yes	N/A	0.466	0.211	0.64	4e-22
Q9W328	313	Protein LST8 homolog OS=D	yes	N/A	0.364	0.172	0.648	6e-15
Q29HG9	315	Protein LST8 homolog OS=D	yes	N/A	0.364	0.171	0.648	6e-15
P41318	303	Target of rapamycin compl	yes	N/A	0.554	0.270	0.370	2e-11

>sp|Q6PA72|LST8_XENLA Target of rapamycin complex subunit lst8 OS=Xenopus laevis GN=mlst8 PE=2 SV=1

 Score =  107 bits (268), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 51/75 (68%), Positives = 57/75 (76%), Gaps = 6/75 (8%)

Query: 27  MVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL 86
           M+AA  GYQHIRMYD  SNNPNPVIN +GVSKN+  VGF EDG+WM+TGGEDC ARIWDL
Sbjct: 56  MIAA-AGYQHIRMYDLNSNNPNPVINYDGVSKNITSVGFHEDGRWMYTGGEDCMARIWDL 114

Query: 87  SLCFIQ-----QVNA 96
               +Q     QVNA
Sbjct: 115 RSRNLQCQRIFQVNA 129

Xenopus laevis (taxid: 8355)

>sp|Q5I0B4|LST8_XENTR Target of rapamycin complex subunit lst8 OS=Xenopus tropicalis GN=mlst8 PE=2 SV=1

 Score =  107 bits (267), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 51/75 (68%), Positives = 57/75 (76%), Gaps = 6/75 (8%)

Query: 27  MVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL 86
           M+AA  GYQHIRMYD  SNNPNPVIN +GVSKN+  VGF EDG+WM+TGGEDC ARIWDL
Sbjct: 56  MIAA-AGYQHIRMYDLNSNNPNPVINYDGVSKNITSVGFHEDGRWMYTGGEDCMARIWDL 114

Query: 87  SLCFIQ-----QVNA 96
               +Q     QVNA
Sbjct: 115 RSRNLQCQRIFQVNA 129

Xenopus tropicalis (taxid: 8364)

>sp|Q803V5|LST8_DANRE Target of rapamycin complex subunit lst8 OS=Danio rerio GN=mlst8 PE=2 SV=1

 Score =  107 bits (267), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 51/75 (68%), Positives = 57/75 (76%), Gaps = 6/75 (8%)

Query: 27  MVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL 86
           M+AA  GYQHIRMYD  SNNPNPVIN +GVSKN+  VGF EDG+WM+TGGEDC ARIWDL
Sbjct: 56  MIAA-AGYQHIRMYDLNSNNPNPVINYDGVSKNITSVGFHEDGRWMYTGGEDCMARIWDL 114

Query: 87  SLCFIQ-----QVNA 96
               +Q     QVNA
Sbjct: 115 RSRNLQCQRIFQVNA 129

Danio rerio (taxid: 7955)

>sp|Q9DCJ1|LST8_MOUSE Target of rapamycin complex subunit LST8 OS=Mus musculus GN=Mlst8 PE=1 SV=1

 Score =  105 bits (261), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 49/75 (65%), Positives = 57/75 (76%), Gaps = 6/75 (8%)

Query: 27  MVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL 86
           M+AA  GYQHIRMYD  SNNPNP+I+ +GVSKN+  VGF EDG+WM+TGGEDC ARIWDL
Sbjct: 56  MIAA-AGYQHIRMYDLNSNNPNPIISYDGVSKNIASVGFHEDGRWMYTGGEDCTARIWDL 114

Query: 87  SLCFIQ-----QVNA 96
               +Q     QVNA
Sbjct: 115 RSRNLQCQRIFQVNA 129

Subunit of both mTORC1 and mTORC2, which regulates cell growth and survival in response to nutrient and hormonal signals. mTORC1 is activated in response to growth factors or amino acids. Growth factor-stimulated mTORC1 activation involves a AKT1-mediated phosphorylation of TSC1-TSC2, which leads to the activation of the RHEB GTPase that potently activates the protein kinase activity of mTORC1. Amino acid-signaling to mTORC1 requires its relocalization to the lysosomes mediated by the Ragulator complex and the Rag GTPases. Activated mTORC1 up-regulates protein synthesis by phosphorylating key regulators of mRNA translation and ribosome synthesis. mTORC1 phosphorylates EIF4EBP1 and releases it from inhibiting the elongation initiation factor 4E (eiF4E). mTORC1 phosphorylates and activates S6K1 at 'Thr-389', which then promotes protein synthesis by phosphorylating PDCD4 and targeting it for degradation. Within mTORC1, LST8 interacts directly with MTOR and enhances its kinase activity. In nutrient-poor conditions, stabilizes the MTOR-RPTOR interaction and favors RPTOR-mediated inhibition of MTOR activity. mTORC2 is also activated by growth factors, but seems to be nutrient-insensitive. mTORC2 seems to function upstream of Rho GTPases to regulate the actin cytoskeleton, probably by activating one or more Rho-type guanine nucleotide exchange factors. mTORC2 promotes the serum-induced formation of stress-fibers or F-actin. mTORC2 plays a critical role in AKT1 'Ser-473' phosphorylation, which may facilitate the phosphorylation of the activation loop of AKT1 on 'Thr-308' by PDK1 which is a prerequisite for full activation. mTORC2 regulates the phosphorylation of SGK1 at 'Ser-422'. mTORC2 also modulates the phosphorylation of PRKCA on 'Ser-657'.

Mus musculus (taxid: 10090)

>sp|Q9Z2K5|LST8_RAT Target of rapamycin complex subunit LST8 OS=Rattus norvegicus GN=Mlst8 PE=1 SV=2

 Score =  104 bits (260), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 49/75 (65%), Positives = 57/75 (76%), Gaps = 6/75 (8%)

Query: 27  MVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL 86
           M+AA G YQHIRMYD  SNNPNP+I+ +GVSKN+  VGF EDG+WM+TGGEDC ARIWDL
Sbjct: 56  MIAATG-YQHIRMYDLNSNNPNPIISYDGVSKNIASVGFHEDGRWMYTGGEDCTARIWDL 114

Query: 87  SLCFIQ-----QVNA 96
               +Q     QVNA
Sbjct: 115 RSRNLQCQRIFQVNA 129

Subunit of both mTORC1 and mTORC2, which regulates cell growth and survival in response to nutrient and hormonal signals. mTORC1 is activated in response to growth factors or amino acids. Growth factor-stimulated mTORC1 activation involves a AKT1-mediated phosphorylation of TSC1-TSC2, which leads to the activation of the RHEB GTPase that potently activates the protein kinase activity of mTORC1. Amino acid-signaling to mTORC1 requires its relocalization to the lysosomes mediated by the Ragulator complex and the Rag GTPases. Activated mTORC1 up-regulates protein synthesis by phosphorylating key regulators of mRNA translation and ribosome synthesis. mTORC1 phosphorylates EIF4EBP1 and releases it from inhibiting the elongation initiation factor 4E (eiF4E). mTORC1 phosphorylates and activates S6K1 at 'Thr-389', which then promotes protein synthesis by phosphorylating PDCD4 and targeting it for degradation. Within mTORC1, LST8 interacts directly with MTOR and enhances its kinase activity. In nutrient-poor conditions, stabilizes the MTOR-RPTOR interaction and favors RPTOR-mediated inhibition of MTOR activity. mTORC2 is also activated by growth factors, but seems to be nutrient-insensitive. mTORC2 seems to function upstream of Rho GTPases to regulate the actin cytoskeleton, probably by activating one or more Rho-type guanine nucleotide exchange factors. mTORC2 promotes the serum-induced formation of stress-fibers or F-actin. mTORC2 plays a critical role in AKT1 'Ser-473' phosphorylation, which may facilitate the phosphorylation of the activation loop of AKT1 on 'Thr-308' by PDK1 which is a prerequisite for full activation. mTORC2 regulates the phosphorylation of SGK1 at 'Ser-421'. mTORC2 also modulates the phosphorylation of PRKCA on 'Ser-657'.

Rattus norvegicus (taxid: 10116)

>sp|Q17QU5|LST8_BOVIN Target of rapamycin complex subunit LST8 OS=Bos taurus GN=MLST8 PE=2 SV=1

 Score =  104 bits (259), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 49/75 (65%), Positives = 57/75 (76%), Gaps = 6/75 (8%)

Query: 27  MVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL 86
           M+AA  GYQHIRMYD  SNNPNP+I+ +GV+KNV  VGF EDG+WM+TGGEDC ARIWDL
Sbjct: 56  MIAA-AGYQHIRMYDLNSNNPNPIISYDGVNKNVASVGFHEDGRWMYTGGEDCTARIWDL 114

Query: 87  SLCFIQ-----QVNA 96
               +Q     QVNA
Sbjct: 115 RSRNLQCQRIFQVNA 129

Subunit of both mTORC1 and mTORC2, which regulates cell growth and survival in response to nutrient and hormonal signals. mTORC1 is activated in response to growth factors or amino acids. Growth factor-stimulated mTORC1 activation involves a AKT1-mediated phosphorylation of TSC1-TSC2, which leads to the activation of the RHEB GTPase that potently activates the protein kinase activity of mTORC1. Amino acid-signaling to mTORC1 requires its relocalization to the lysosomes mediated by the Ragulator complex and the Rag GTPases. Activated mTORC1 up-regulates protein synthesis by phosphorylating key regulators of mRNA translation and ribosome synthesis. mTORC1 phosphorylates EIF4EBP1 and releases it from inhibiting the elongation initiation factor 4E (eiF4E). mTORC1 phosphorylates and activates S6K1 at 'Thr-389', which then promotes protein synthesis by phosphorylating PDCD4 and targeting it for degradation. Within mTORC1, LST8 interacts directly with MTOR and enhances its kinase activity. In nutrient-poor conditions, stabilizes the MTOR-RPTOR interaction and favors RPTOR-mediated inhibition of MTOR activity. mTORC2 is also activated by growth factors, but seems to be nutrient-insensitive. mTORC2 seems to function upstream of Rho GTPases to regulate the actin cytoskeleton, probably by activating one or more Rho-type guanine nucleotide exchange factors. mTORC2 promotes the serum-induced formation of stress-fibers or F-actin. mTORC2 plays a critical role in AKT1 'Ser-473' phosphorylation, which may facilitate the phosphorylation of the activation loop of AKT1 on 'Thr-308' by PDK1 which is a prerequisite for full activation. mTORC2 regulates the phosphorylation of SGK1 at 'Ser-422'. mTORC2 also modulates the phosphorylation of PRKCA on 'Ser-657'.

Bos taurus (taxid: 9913)

>sp|Q9BVC4|LST8_HUMAN Target of rapamycin complex subunit LST8 OS=Homo sapiens GN=MLST8 PE=1 SV=1

 Score =  103 bits (257), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 48/75 (64%), Positives = 57/75 (76%), Gaps = 6/75 (8%)

Query: 27  MVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL 86
           M+AA  GYQHIRMYD  SNNPNP+I+ +GV+KN+  VGF EDG+WM+TGGEDC ARIWDL
Sbjct: 56  MIAA-AGYQHIRMYDLNSNNPNPIISYDGVNKNIASVGFHEDGRWMYTGGEDCTARIWDL 114

Query: 87  SLCFIQ-----QVNA 96
               +Q     QVNA
Sbjct: 115 RSRNLQCQRIFQVNA 129

Subunit of both mTORC1 and mTORC2, which regulates cell growth and survival in response to nutrient and hormonal signals. mTORC1 is activated in response to growth factors or amino acids. Growth factor-stimulated mTORC1 activation involves a AKT1-mediated phosphorylation of TSC1-TSC2, which leads to the activation of the RHEB GTPase that potently activates the protein kinase activity of mTORC1. Amino acid-signaling to mTORC1 requires its relocalization to the lysosomes mediated by the Ragulator complex and the Rag GTPases. Activated mTORC1 up-regulates protein synthesis by phosphorylating key regulators of mRNA translation and ribosome synthesis. mTORC1 phosphorylates EIF4EBP1 and releases it from inhibiting the elongation initiation factor 4E (eiF4E). mTORC1 phosphorylates and activates S6K1 at 'Thr-389', which then promotes protein synthesis by phosphorylating PDCD4 and targeting it for degradation. Within mTORC1, LST8 interacts directly with MTOR and enhances its kinase activity. In nutrient-poor conditions, stabilizes the MTOR-RPTOR interaction and favors RPTOR-mediated inhibition of MTOR activity. mTORC2 is also activated by growth factors, but seems to be nutrient-insensitive. mTORC2 seems to function upstream of Rho GTPases to regulate the actin cytoskeleton, probably by activating one or more Rho-type guanine nucleotide exchange factors. mTORC2 promotes the serum-induced formation of stress-fibers or F-actin. mTORC2 plays a critical role in AKT1 'Ser-473' phosphorylation, which may facilitate the phosphorylation of the activation loop of AKT1 on 'Thr-308' by PDK1 which is a prerequisite for full activation. mTORC2 regulates the phosphorylation of SGK1 at 'Ser-422'. mTORC2 also modulates the phosphorylation of PRKCA on 'Ser-657'.

Homo sapiens (taxid: 9606)

>sp|Q9W328|LST8_DROME Protein LST8 homolog OS=Drosophila melanogaster GN=CG3004 PE=2 SV=2

 Score = 79.7 bits (195), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 35/54 (64%), Positives = 39/54 (72%)

Query: 33  GYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL 86
           GYQ IR+YD  SN   PVIN +GV KNV  +GFQEDG WMFT GED   RIWD+
Sbjct: 56  GYQCIRLYDLESNCTAPVINFDGVQKNVTRLGFQEDGNWMFTAGEDHHVRIWDM 109

Drosophila melanogaster (taxid: 7227)

>sp|Q29HG9|LST8_DROPS Protein LST8 homolog OS=Drosophila pseudoobscura pseudoobscura GN=GA15597 PE=3 SV=1

 Score = 79.7 bits (195), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 35/54 (64%), Positives = 39/54 (72%)

Query: 33  GYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL 86
           GYQ IR+YD  SN   PVIN +GV KNV  +GFQEDG WMFT GED   RIWD+
Sbjct: 54  GYQCIRLYDLESNCTAPVINFDGVQKNVTRLGFQEDGNWMFTAGEDHHVRIWDM 107

Drosophila pseudoobscura pseudoobscura (taxid: 46245)

>sp|P41318|LST8_YEAST Target of rapamycin complex subunit LST8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LST8 PE=1 SV=1

 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 7/89 (7%)

Query: 30  ALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC 89
           A  G+Q++R+YD  + NPNPV + EG   NV  V FQ+D +WM T  ED   ++WD+   
Sbjct: 48  ATAGHQNVRLYDIRTTNPNPVASFEGHRGNVTSVSFQQDNRWMVTSSEDGTIKVWDVRSP 107

Query: 90  FIQQ-------VNALRITPDKQLLASAEE 111
            I +       VN + I P++  L S + 
Sbjct: 108 SIPRNYKHNAPVNEVVIHPNQGELISCDR 136

Essential component of both TORC1 and TORC2. TORC1 regulates multiple cellular processes to control cell growth in response to environmental signals. Nutrient limitation and environmental stress signals cause inactivation of TORC1. Active TORC1 positively controls ribosome biogenesis via control of rRNA, ribosomal protein and tRNA gene expression, and rRNA processing. TORC1 positively controls protein biosynthesis by regulation of mRNA stability, translation initiation factor activity, and high-affinity amino acid permeases that serve to provide amino acids for use by the translation machinery. TORC1 also promotes growth by sequestering a number of nutrient and general stress-responsive transcription factors in the cytoplasm. TORC1 negatively controls macroautophagy, a process to recycle surplus cytoplasmic mass under nutrient starvation conditions. LST8 is involved in the negative regulation of transcription factors GLN3 and RTG1-RTG3, limiting the synthesis of alpha-ketoglutarate, glutamate and glutamine. LST8 is required for targeting of amino acid permeases (AAPs) to the plasma membrane. TORC2 regulates cell cycle-dependent polarization of the actin-cytoskeleton, cell wall integrity, and receptor endocytosis. TORC2 controls polarity of the actin cytoskeleton, which is required for orienting the secretory pathway toward discrete growth sites, via the RHO1/PKC1/MAPK cell integrity pathway. LST8 is involved in maintenance of cell wall integrity. LST8 modulates TOR2 kinase activity.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	148
332030750	320	Target of rapamycin complex subunit lst8	0.452	0.209	0.686	4e-22
307177354	320	Protein LST8-like protein [Camponotus fl	0.452	0.209	0.671	5e-22
322788746	114	hypothetical protein SINV_09196 [Solenop	0.412	0.535	0.737	1e-21
89272052	327	G protein beta subunit-like [Xenopus (Si	0.466	0.211	0.68	1e-21
148226889	326	target of rapamycin complex subunit lst8	0.466	0.211	0.68	1e-21
327288985	325	PREDICTED: target of rapamycin complex s	0.466	0.212	0.68	1e-21
58332736	326	target of rapamycin complex subunit lst8	0.466	0.211	0.68	1e-21
225715280	328	LTS8 homolog [Esox lucius]	0.466	0.210	0.68	1e-21
432921532	326	PREDICTED: target of rapamycin complex s	0.466	0.211	0.68	1e-21
363739408	325	PREDICTED: target of rapamycin complex s	0.466	0.212	0.68	1e-21

>gi|332030750|gb|EGI70426.1| Target of rapamycin complex subunit lst8 [Acromyrmex echinatior]

 Score =  109 bits (273), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 52/67 (77%)

Query: 26  EMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWD 85
           + V A  GYQHIRMYD  SNNPNPVIN EGVSKN+  +GFQE+GKWM+TGGEDC AR+WD
Sbjct: 53  KYVVAAAGYQHIRMYDLASNNPNPVINYEGVSKNITSLGFQEEGKWMYTGGEDCSARVWD 112

Query: 86  LSLCFIQ 92
           L     Q
Sbjct: 113 LRSSSFQ 119

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307177354|gb|EFN66527.1| Protein LST8-like protein [Camponotus floridanus]

 Score =  108 bits (271), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 52/67 (77%)

Query: 26  EMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWD 85
           + V A  GYQHIRMYD  SNNPNPV+N EGVSKN+  +GFQE+GKWM+TGGEDC AR+WD
Sbjct: 53  KYVVAAAGYQHIRMYDLASNNPNPVVNYEGVSKNITSLGFQEEGKWMYTGGEDCSARVWD 112

Query: 86  LSLCFIQ 92
           L     Q
Sbjct: 113 LRSSSFQ 119

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322788746|gb|EFZ14335.1| hypothetical protein SINV_09196 [Solenopsis invicta]

 Score =  107 bits (268), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 45/61 (73%), Positives = 51/61 (83%)

Query: 26  EMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWD 85
           + V A  GYQHIRMYD  SNNPNPVIN EGVSKN+  +GFQE+GKWM+TGGEDC AR+WD
Sbjct: 53  KYVVAAAGYQHIRMYDLASNNPNPVINYEGVSKNITSLGFQEEGKWMYTGGEDCSARVWD 112

Query: 86  L 86
           L
Sbjct: 113 L 113

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|89272052|emb|CAJ82929.1| G protein beta subunit-like [Xenopus (Silurana) tropicalis]

 Score =  107 bits (268), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 51/75 (68%), Positives = 57/75 (76%), Gaps = 6/75 (8%)

Query: 27  MVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL 86
           M+AA  GYQHIRMYD  SNNPNPVIN +GVSKN+  VGF EDG+WM+TGGEDC ARIWDL
Sbjct: 57  MIAA-AGYQHIRMYDLNSNNPNPVINYDGVSKNITSVGFHEDGRWMYTGGEDCMARIWDL 115

Query: 87  SLCFIQ-----QVNA 96
               +Q     QVNA
Sbjct: 116 RSRNLQCQRIFQVNA 130

Source: Xenopus (Silurana) tropicalis

Species: Xenopus (Silurana) tropicalis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|148226889|ref|NP_001083382.1| target of rapamycin complex subunit lst8 [Xenopus laevis] gi|82237611|sp|Q6PA72.1|LST8_XENLA RecName: Full=Target of rapamycin complex subunit lst8; Short=TORC subunit lst8; AltName: Full=G protein beta subunit-like; Short=Gable; Short=Protein GbetaL; AltName: Full=MTOR associated protein, LST8 homolog gi|38014664|gb|AAH60429.1| Lts8 protein [Xenopus laevis]

 Score =  107 bits (268), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 51/75 (68%), Positives = 57/75 (76%), Gaps = 6/75 (8%)

Query: 27  MVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL 86
           M+AA  GYQHIRMYD  SNNPNPVIN +GVSKN+  VGF EDG+WM+TGGEDC ARIWDL
Sbjct: 56  MIAA-AGYQHIRMYDLNSNNPNPVINYDGVSKNITSVGFHEDGRWMYTGGEDCMARIWDL 114

Query: 87  SLCFIQ-----QVNA 96
               +Q     QVNA
Sbjct: 115 RSRNLQCQRIFQVNA 129

Source: Xenopus laevis

Species: Xenopus laevis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|327288985|ref|XP_003229205.1| PREDICTED: target of rapamycin complex subunit lst8-like [Anolis carolinensis]

 Score =  107 bits (267), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 51/75 (68%), Positives = 57/75 (76%), Gaps = 6/75 (8%)

Query: 27  MVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL 86
           M+AA  GYQHIRMYD  SNNPNPVIN +GVSKN+  VGF EDG+WM+TGGEDC ARIWDL
Sbjct: 55  MIAA-AGYQHIRMYDLNSNNPNPVINYDGVSKNITSVGFHEDGRWMYTGGEDCMARIWDL 113

Query: 87  SLCFIQ-----QVNA 96
               +Q     QVNA
Sbjct: 114 RSRNLQCQRIFQVNA 128

Source: Anolis carolinensis

Species: Anolis carolinensis

Genus: Anolis

Family: Iguanidae

Order: Squamata

Phylum: Chordata

Superkingdom: Eukaryota

>gi|58332736|ref|NP_001011443.1| target of rapamycin complex subunit lst8 [Xenopus (Silurana) tropicalis] gi|82231633|sp|Q5I0B4.1|LST8_XENTR RecName: Full=Target of rapamycin complex subunit lst8; Short=TORC subunit lst8; AltName: Full=G protein beta subunit-like; Short=Gable; Short=Protein GbetaL; AltName: Full=MTOR associated protein, LST8 homolog gi|56971906|gb|AAH88512.1| Protein LTS8 homolog [Xenopus (Silurana) tropicalis]

 Score =  107 bits (267), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 51/75 (68%), Positives = 57/75 (76%), Gaps = 6/75 (8%)

Query: 27  MVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL 86
           M+AA  GYQHIRMYD  SNNPNPVIN +GVSKN+  VGF EDG+WM+TGGEDC ARIWDL
Sbjct: 56  MIAA-AGYQHIRMYDLNSNNPNPVINYDGVSKNITSVGFHEDGRWMYTGGEDCMARIWDL 114

Query: 87  SLCFIQ-----QVNA 96
               +Q     QVNA
Sbjct: 115 RSRNLQCQRIFQVNA 129

Source: Xenopus (Silurana) tropicalis

Species: Xenopus (Silurana) tropicalis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|225715280|gb|ACO13486.1| LTS8 homolog [Esox lucius]

 Score =  107 bits (267), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 51/75 (68%), Positives = 57/75 (76%), Gaps = 6/75 (8%)

Query: 27  MVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL 86
           M+AA  GYQHIRMYD  SNNPNPVIN +GVSKN+  VGF EDG+WM+TGGEDC ARIWDL
Sbjct: 58  MIAA-AGYQHIRMYDLNSNNPNPVINYDGVSKNITSVGFHEDGRWMYTGGEDCMARIWDL 116

Query: 87  SLCFIQ-----QVNA 96
               +Q     QVNA
Sbjct: 117 RSRNLQCQRIFQVNA 131

Source: Esox lucius

Species: Esox lucius

Genus: Esox

Family: Esocidae

Order: Esociformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|432921532|ref|XP_004080193.1| PREDICTED: target of rapamycin complex subunit lst8-like [Oryzias latipes]

 Score =  107 bits (267), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 51/75 (68%), Positives = 57/75 (76%), Gaps = 6/75 (8%)

Query: 27  MVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL 86
           M+AA  GYQHIRMYD  SNNPNPVIN +GVSKN+  VGF EDG+WM+TGGEDC ARIWDL
Sbjct: 56  MIAA-AGYQHIRMYDLNSNNPNPVINYDGVSKNITSVGFHEDGRWMYTGGEDCMARIWDL 114

Query: 87  SLCFIQ-----QVNA 96
               +Q     QVNA
Sbjct: 115 RSRNLQCQRIFQVNA 129

Source: Oryzias latipes

Species: Oryzias latipes

Genus: Oryzias

Family: Adrianichthyidae

Order: Beloniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|363739408|ref|XP_414858.3| PREDICTED: target of rapamycin complex subunit lst8-like [Gallus gallus]

 Score =  107 bits (267), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 51/75 (68%), Positives = 57/75 (76%), Gaps = 6/75 (8%)

Query: 27  MVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL 86
           M+AA  GYQHIRMYD  SNNPNPVIN +GVSKN+  VGF EDG+WM+TGGEDC ARIWDL
Sbjct: 55  MIAA-AGYQHIRMYDLNSNNPNPVINYDGVSKNITSVGFHEDGRWMYTGGEDCMARIWDL 113

Query: 87  SLCFIQ-----QVNA 96
               +Q     QVNA
Sbjct: 114 RSRNLQCQRIFQVNA 128

Source: Gallus gallus

Species: Gallus gallus

Genus: Gallus

Family: Phasianidae

Order: Galliformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	148
RGD|69242	326	Mlst8 "MTOR associated protein	0.398	0.180	0.733	6.2e-24
UNIPROTKB|Q17QU5	326	MLST8 "Target of rapamycin com	0.398	0.180	0.733	7.9e-24
UNIPROTKB|Q9BVC4	326	MLST8 "Target of rapamycin com	0.398	0.180	0.716	1e-23
UNIPROTKB|F1RFA8	330	MLST8 "Uncharacterized protein	0.398	0.178	0.716	1e-23
UNIPROTKB|F1NAZ4	327	MLST8 "Uncharacterized protein	0.398	0.180	0.766	1.3e-22
UNIPROTKB|Q5I0B4	326	mlst8 "Target of rapamycin com	0.398	0.180	0.766	1.3e-22
UNIPROTKB|Q6PA72	326	mlst8 "Target of rapamycin com	0.398	0.180	0.766	1.3e-22
ZFIN|ZDB-GENE-030131-6176	326	mlst8 "MTOR associated protein	0.398	0.180	0.766	1.3e-22
MGI|MGI:1929514	326	Mlst8 "MTOR associated protein	0.398	0.180	0.733	5.5e-22
UNIPROTKB|H3BN58	202	MLST8 "Target of rapamycin com	0.398	0.292	0.716	1.1e-21

RGD|69242 Mlst8 "MTOR associated protein, LST8 homolog (S. cerevisiae)" [Rattus norvegicus (taxid:10116)]

 Score = 255 (94.8 bits), Expect = 6.2e-24, Sum P(2) = 6.2e-24
 Identities = 44/60 (73%), Positives = 51/60 (85%)

Query:    27 MVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL 86
             M+AA G YQHIRMYD  SNNPNP+I+ +GVSKN+  VGF EDG+WM+TGGEDC ARIWDL
Sbjct:    56 MIAATG-YQHIRMYDLNSNNPNPIISYDGVSKNIASVGFHEDGRWMYTGGEDCTARIWDL 114

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0008150 "biological_process" evidence=ND

GO:0030838 "positive regulation of actin filament polymerization" evidence=IEA;ISO

GO:0032008 "positive regulation of TOR signaling cascade" evidence=IEA;ISO

GO:0032314 "regulation of Rac GTPase activity" evidence=IEA;ISO

GO:0032956 "regulation of actin cytoskeleton organization" evidence=ISO

GO:0050731 "positive regulation of peptidyl-tyrosine phosphorylation" evidence=IEA;ISO

UNIPROTKB|Q17QU5 MLST8 "Target of rapamycin complex subunit LST8" [Bos taurus (taxid:9913)]

 Score = 254 (94.5 bits), Expect = 7.9e-24, Sum P(2) = 7.9e-24
 Identities = 44/60 (73%), Positives = 51/60 (85%)

Query:    27 MVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL 86
             M+AA  GYQHIRMYD  SNNPNP+I+ +GV+KNV  VGF EDG+WM+TGGEDC ARIWDL
Sbjct:    56 MIAA-AGYQHIRMYDLNSNNPNPIISYDGVNKNVASVGFHEDGRWMYTGGEDCTARIWDL 114

GO:0005737 "cytoplasm" evidence=ISS

GO:0050731 "positive regulation of peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0032314 "regulation of Rac GTPase activity" evidence=IEA

GO:0032008 "positive regulation of TOR signaling cascade" evidence=IEA

GO:0030838 "positive regulation of actin filament polymerization" evidence=IEA

UNIPROTKB|Q9BVC4 MLST8 "Target of rapamycin complex subunit LST8" [Homo sapiens (taxid:9606)]

 Score = 253 (94.1 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
 Identities = 43/60 (71%), Positives = 51/60 (85%)

Query:    27 MVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL 86
             M+AA  GYQHIRMYD  SNNPNP+I+ +GV+KN+  VGF EDG+WM+TGGEDC ARIWDL
Sbjct:    56 MIAA-AGYQHIRMYDLNSNNPNPIISYDGVNKNIASVGFHEDGRWMYTGGEDCTARIWDL 114

GO:0030838 "positive regulation of actin filament polymerization" evidence=IEA

GO:0032314 "regulation of Rac GTPase activity" evidence=IEA

GO:0050731 "positive regulation of peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISS

GO:0032008 "positive regulation of TOR signaling cascade" evidence=IMP

GO:0032956 "regulation of actin cytoskeleton organization" evidence=IMP

GO:0005829 "cytosol" evidence=TAS

GO:0007173 "epidermal growth factor receptor signaling pathway" evidence=TAS

GO:0008286 "insulin receptor signaling pathway" evidence=TAS

GO:0008543 "fibroblast growth factor receptor signaling pathway" evidence=TAS

GO:0031295 "T cell costimulation" evidence=TAS

GO:0048011 "neurotrophin TRK receptor signaling pathway" evidence=TAS

GO:0048015 "phosphatidylinositol-mediated signaling" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|F1RFA8 MLST8 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 253 (94.1 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
 Identities = 43/60 (71%), Positives = 51/60 (85%)

Query:    27 MVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL 86
             M+AA  GYQHIRMYD  SNNPNP+I+ +GV+KN+  VGF EDG+WM+TGGEDC ARIWDL
Sbjct:    60 MIAA-AGYQHIRMYDLNSNNPNPIISYDGVNKNIASVGFHEDGRWMYTGGEDCTARIWDL 118

GO:0050731 "positive regulation of peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0032314 "regulation of Rac GTPase activity" evidence=IEA

GO:0032008 "positive regulation of TOR signaling cascade" evidence=IEA

GO:0030838 "positive regulation of actin filament polymerization" evidence=IEA

UNIPROTKB|F1NAZ4 MLST8 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
 Identities = 46/60 (76%), Positives = 51/60 (85%)

Query:    27 MVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL 86
             M+AA  GYQHIRMYD  SNNPNPVIN +GVSKN+  VGF EDG+WM+TGGEDC ARIWDL
Sbjct:    57 MIAA-AGYQHIRMYDLNSNNPNPVINYDGVSKNITSVGFHEDGRWMYTGGEDCMARIWDL 115

GO:0030838 "positive regulation of actin filament polymerization" evidence=IEA

GO:0032008 "positive regulation of TOR signaling cascade" evidence=IEA

GO:0032314 "regulation of Rac GTPase activity" evidence=IEA

GO:0050731 "positive regulation of peptidyl-tyrosine phosphorylation" evidence=IEA

UNIPROTKB|Q5I0B4 mlst8 "Target of rapamycin complex subunit lst8" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
 Identities = 46/60 (76%), Positives = 51/60 (85%)

Query:    27 MVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL 86
             M+AA  GYQHIRMYD  SNNPNPVIN +GVSKN+  VGF EDG+WM+TGGEDC ARIWDL
Sbjct:    56 MIAA-AGYQHIRMYDLNSNNPNPVINYDGVSKNITSVGFHEDGRWMYTGGEDCMARIWDL 114

GO:0005737 "cytoplasm" evidence=ISS

UNIPROTKB|Q6PA72 mlst8 "Target of rapamycin complex subunit lst8" [Xenopus laevis (taxid:8355)]

 Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
 Identities = 46/60 (76%), Positives = 51/60 (85%)

Query:    27 MVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL 86
             M+AA  GYQHIRMYD  SNNPNPVIN +GVSKN+  VGF EDG+WM+TGGEDC ARIWDL
Sbjct:    56 MIAA-AGYQHIRMYDLNSNNPNPVINYDGVSKNITSVGFHEDGRWMYTGGEDCMARIWDL 114

GO:0005737 "cytoplasm" evidence=ISS

ZFIN|ZDB-GENE-030131-6176 mlst8 "MTOR associated protein, LST8 homolog (S. cerevisiae)" [Danio rerio (taxid:7955)]

 Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
 Identities = 46/60 (76%), Positives = 51/60 (85%)

Query:    27 MVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL 86
             M+AA  GYQHIRMYD  SNNPNPVIN +GVSKN+  VGF EDG+WM+TGGEDC ARIWDL
Sbjct:    56 MIAA-AGYQHIRMYDLNSNNPNPVINYDGVSKNITSVGFHEDGRWMYTGGEDCMARIWDL 114

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=IEA;ISS

MGI|MGI:1929514 Mlst8 "MTOR associated protein, LST8 homolog (S. cerevisiae)" [Mus musculus (taxid:10090)]

 Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
 Identities = 44/60 (73%), Positives = 51/60 (85%)

Query:    27 MVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL 86
             M+AA  GYQHIRMYD  SNNPNP+I+ +GVSKN+  VGF EDG+WM+TGGEDC ARIWDL
Sbjct:    56 MIAA-AGYQHIRMYDLNSNNPNPIISYDGVSKNIASVGFHEDGRWMYTGGEDCTARIWDL 114

GO:0005737 "cytoplasm" evidence=ISO

GO:0005829 "cytosol" evidence=ISO

GO:0030838 "positive regulation of actin filament polymerization" evidence=IMP

GO:0031931 "TORC1 complex" evidence=ISO

GO:0031932 "TORC2 complex" evidence=ISO

GO:0032008 "positive regulation of TOR signaling cascade" evidence=ISO

GO:0032314 "regulation of Rac GTPase activity" evidence=IMP

GO:0032956 "regulation of actin cytoskeleton organization" evidence=ISO

GO:0050731 "positive regulation of peptidyl-tyrosine phosphorylation" evidence=IMP

UNIPROTKB|H3BN58 MLST8 "Target of rapamycin complex subunit LST8" [Homo sapiens (taxid:9606)]

 Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
 Identities = 43/60 (71%), Positives = 51/60 (85%)

Query:    27 MVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL 86
             M+AA  GYQHIRMYD  SNNPNP+I+ +GV+KN+  VGF EDG+WM+TGGEDC ARIWDL
Sbjct:    56 MIAA-AGYQHIRMYDLNSNNPNPIISYDGVNKNIASVGFHEDGRWMYTGGEDCTARIWDL 114

GO:0030838 "positive regulation of actin filament polymerization" evidence=IEA

GO:0032314 "regulation of Rac GTPase activity" evidence=IEA

GO:0050731 "positive regulation of peptidyl-tyrosine phosphorylation" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9Z2K5	LST8_RAT	No assigned EC number	0.6533	0.4662	0.2116	yes	N/A
Q803V5	LST8_DANRE	No assigned EC number	0.68	0.4662	0.2116	yes	N/A
Q17QU5	LST8_BOVIN	No assigned EC number	0.6533	0.4662	0.2116	yes	N/A
Q9BVC4	LST8_HUMAN	No assigned EC number	0.64	0.4662	0.2116	yes	N/A
Q9DCJ1	LST8_MOUSE	No assigned EC number	0.6533	0.4662	0.2116	yes	N/A
Q5I0B4	LST8_XENTR	No assigned EC number	0.68	0.4662	0.2116	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	148
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	5e-05
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	6e-05
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	1e-04
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	1e-04
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	2e-04
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	0.001
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	0.002
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	0.002
smart00320	40	smart00320, WD40, WD40 repeats	0.004

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 41.2 bits (97), Expect = 5e-05
 Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 10/81 (12%)

Query: 37  IRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLCFIQQ--- 93
           IR++D        V    G +  V  V F  DG+ + +   D   ++WD+          
Sbjct: 75  IRLWD--LETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLR 132

Query: 94  -----VNALRITPDKQLLASA 109
                VN++  +PD   +AS+
Sbjct: 133 GHTDWVNSVAFSPDGTFVASS 153

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 41.2 bits (97), Expect = 6e-05
 Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 10/84 (11%)

Query: 36  HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLCFIQQ-- 93
            I+++D   +    +    G    V  V F  DG  + +G ED   R+WDL      Q  
Sbjct: 200 TIKLWDL--STGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTL 257

Query: 94  ------VNALRITPDKQLLASAEE 111
                 V +L  +PD + LAS   
Sbjct: 258 SGHTNSVTSLAWSPDGKRLASGSA 281

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 40.4 bits (95), Expect = 1e-04
 Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 10/81 (12%)

Query: 37  IRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLS--------L 88
           I+++D        V    G +  V  V F  DG+ + +   D   ++WDLS         
Sbjct: 159 IKLWDL--RTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLR 216

Query: 89  CFIQQVNALRITPDKQLLASA 109
                VN++  +PD  LLAS 
Sbjct: 217 GHENGVNSVAFSPDGYLLASG 237

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 40.0 bits (94), Expect = 1e-04
 Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 2/59 (3%)

Query: 27  MVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWD 85
           ++A+      IR++D  +      +   G + +V  + +  DGK + +G  D   RIWD
Sbjct: 233 LLASGSEDGTIRVWDLRTGECVQTL--SGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 39.7 bits (91), Expect = 2e-04
 Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 11/83 (13%)

Query: 37  IRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLCFIQ---- 92
           IR++D  S++ + +    G S +V+ V F  DGK + +G  D   R+WDL    +     
Sbjct: 265 IRLWDLRSSS-SLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLT 323

Query: 93  ------QVNALRITPDKQLLASA 109
                  V++L  +PD  LL S 
Sbjct: 324 LKGHEGPVSSLSFSPDGSLLVSG 346

Length = 466

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 36.9 bits (86), Expect = 0.001
 Identities = 18/81 (22%), Positives = 37/81 (45%), Gaps = 10/81 (12%)

Query: 37  IRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC------- 89
           I+++D        +   +G +  V +V    DG ++ +G  D   R+WDL          
Sbjct: 33  IKVWDL--ETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECVRTLT 90

Query: 90  -FIQQVNALRITPDKQLLASA 109
                V+++  +PD ++L+S+
Sbjct: 91  GHTSYVSSVAFSPDGRILSSS 111

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 36.9 bits (86), Expect = 0.002
 Identities = 15/53 (28%), Positives = 20/53 (37%), Gaps = 8/53 (15%)

Query: 65  FQEDGKWMFTGGEDCRARIWDLSLCF--------IQQVNALRITPDKQLLASA 109
           F  DGK + TG  D   ++WDL               V  +  + D   LAS 
Sbjct: 17  FSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASG 69

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 37.0 bits (84), Expect = 0.002
 Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 11/82 (13%)

Query: 37  IRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLCFI----- 91
           IR++D  +          G S +VV   F  DG  + +G  D   R+WDL          
Sbjct: 223 IRLWDLSTGKLLRST-LSGHSDSVVSS-FSPDGSLLASGSSDGTIRLWDLRSSSSLLRTL 280

Query: 92  ----QQVNALRITPDKQLLASA 109
                 V ++  +PD +LLAS 
Sbjct: 281 SGHSSSVLSVAFSPDGKLLASG 302

Length = 466

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 33.1 bits (76), Expect = 0.004
 Identities = 11/40 (27%), Positives = 21/40 (52%)

Query: 46 NPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWD 85
          +   +   +G +  V  V F  DGK++ +G +D   ++WD
Sbjct: 1  SGELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	148
KOG0271|consensus	480		99.88
KOG0272|consensus	459		99.87
KOG0263|consensus	707		99.86
KOG0279|consensus	315		99.83
KOG0272|consensus	459		99.83
KOG0266|consensus	456		99.82
KOG0263|consensus	707		99.82
PTZ00421	493	coronin; Provisional	99.81
KOG0279|consensus	315		99.8
KOG0273|consensus	524		99.79
KOG0286|consensus	343		99.78
KOG0266|consensus	456		99.78
PTZ00420	568	coronin; Provisional	99.78
KOG0271|consensus	480		99.78
KOG0285|consensus	460		99.77
KOG0315|consensus	311		99.76
KOG0277|consensus	311		99.76
KOG0284|consensus	464		99.75
KOG0302|consensus	440		99.74
KOG0286|consensus	343		99.73
KOG0269|consensus	839		99.72
KOG0319|consensus	775		99.72
KOG0295|consensus	406		99.72
KOG0284|consensus	464		99.71
KOG0283|consensus	712		99.71
KOG0291|consensus	893		99.71
KOG0291|consensus	893		99.71
KOG0315|consensus	311		99.7
KOG1446|consensus	311		99.7
KOG0277|consensus	311		99.7
PTZ00421	493	coronin; Provisional	99.7
KOG0282|consensus	503		99.7
KOG0275|consensus	508		99.69
KOG0316|consensus	307		99.68
KOG0316|consensus	307		99.68
KOG0647|consensus	347		99.67
PLN00181	793	protein SPA1-RELATED; Provisional	99.67
KOG0264|consensus	422		99.67
KOG0640|consensus	430		99.67
KOG0772|consensus	641		99.67
KOG0645|consensus	312		99.66
KOG0645|consensus	312		99.66
KOG0640|consensus	430		99.66
KOG0285|consensus	460		99.66
KOG0295|consensus	406		99.65
KOG0273|consensus	524		99.65
KOG0318|consensus	603		99.65
KOG1273|consensus	405		99.65
KOG0318|consensus	603		99.64
KOG0283|consensus	712		99.64
KOG0289|consensus	506		99.63
KOG0296|consensus	399		99.63
KOG0289|consensus	506		99.63
KOG0276|consensus	794		99.63
KOG1446|consensus	311		99.62
PTZ00420	568	coronin; Provisional	99.62
KOG0772|consensus	641		99.61
KOG0281|consensus	499		99.61
KOG0292|consensus	1202		99.61
KOG0319|consensus	775		99.6
KOG0310|consensus	487		99.6
KOG0265|consensus	338		99.59
KOG0643|consensus	327		99.59
KOG0265|consensus	338		99.58
KOG1407|consensus	313		99.58
KOG0269|consensus	839		99.58
KOG1539|consensus	910		99.58
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	99.57
KOG0293|consensus	519		99.57
KOG0303|consensus	472		99.57
KOG0264|consensus	422		99.56
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	99.56
KOG1445|consensus	1012		99.56
KOG0313|consensus	423		99.55
KOG0643|consensus	327		99.54
KOG0296|consensus	399		99.54
KOG0276|consensus	794		99.54
KOG0305|consensus	484		99.54
KOG0267|consensus	825		99.53
KOG1407|consensus	313		99.53
KOG0282|consensus	503		99.53
KOG0639|consensus	705		99.53
KOG0275|consensus	508		99.52
KOG0973|consensus	942		99.52
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.52
KOG0270|consensus	463		99.52
KOG0281|consensus	499		99.52
KOG0294|consensus	362		99.51
KOG0310|consensus	487		99.5
KOG0305|consensus	484		99.5
KOG1063|consensus	764		99.5
KOG1274|consensus	933		99.49
PLN00181	793	protein SPA1-RELATED; Provisional	99.49
KOG4283|consensus	397		99.49
KOG1034|consensus	385		99.49
KOG1332|consensus	299		99.49
KOG2110|consensus	391		99.47
KOG0313|consensus	423		99.47
KOG1007|consensus	370		99.47
KOG0300|consensus	481		99.47
KOG0268|consensus	433		99.47
KOG0278|consensus	334		99.47
KOG4378|consensus	673		99.46
KOG0308|consensus	735		99.46
KOG0294|consensus	362		99.46
KOG0771|consensus	398		99.45
KOG1188|consensus	376		99.45
KOG0641|consensus	350		99.44
KOG0308|consensus	735		99.44
KOG0306|consensus	888		99.43
KOG1445|consensus	1012		99.43
KOG0292|consensus	1202		99.42
KOG0302|consensus	440		99.42
KOG0303|consensus	472		99.41
KOG0267|consensus	825		99.41
KOG0641|consensus	350		99.41
KOG0278|consensus	334		99.4
KOG0306|consensus	888		99.4
KOG0288|consensus	459		99.4
KOG4283|consensus	397		99.4
KOG0973|consensus	942		99.39
KOG0639|consensus	705		99.39
KOG1036|consensus	323		99.38
KOG0274|consensus	537		99.38
KOG2394|consensus	636		99.38
KOG0646|consensus	476		99.37
KOG0274|consensus	537		99.37
KOG2394|consensus	636		99.36
KOG1332|consensus	299		99.35
KOG2055|consensus	514		99.35
KOG0642|consensus	577		99.35
KOG0649|consensus	325		99.34
KOG0268|consensus	433		99.33
KOG0647|consensus	347		99.33
KOG1036|consensus	323		99.33
KOG0321|consensus	720		99.32
KOG0293|consensus	519		99.31
KOG2096|consensus	420		99.31
KOG1188|consensus	376		99.3
KOG0322|consensus	323		99.3
KOG1009|consensus	434		99.29
KOG0290|consensus	364		99.29
KOG0646|consensus	476		99.28
KOG1034|consensus	385		99.27
KOG4328|consensus	498		99.26
KOG2048|consensus	691		99.26
KOG0288|consensus	459		99.26
KOG2111|consensus	346		99.26
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.25
KOG4378|consensus	673		99.25
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.25
KOG0299|consensus	479		99.24
KOG1539|consensus	910		99.24
KOG0307|consensus	1049		99.24
KOG1408|consensus	1080		99.22
KOG2445|consensus	361		99.22
KOG0301|consensus	745		99.21
KOG1009|consensus	434		99.21
KOG2919|consensus	406		99.2
KOG1310|consensus	758		99.2
KOG0299|consensus	479		99.2
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.19
KOG1273|consensus	405		99.19
KOG2096|consensus	420		99.17
KOG2919|consensus	406		99.16
KOG0300|consensus	481		99.15
KOG1007|consensus	370		99.15
KOG0644|consensus	1113		99.13
KOG0301|consensus	745		99.13
KOG1408|consensus	1080		99.12
KOG2055|consensus	514		99.11
KOG0307|consensus	1049		99.1
KOG3881|consensus	412		99.1
KOG0270|consensus	463		99.07
KOG1538|consensus	1081		99.06
KOG0650|consensus	733		99.06
KOG2445|consensus	361		99.06
KOG2048|consensus	691		99.06
KOG1272|consensus	545		99.04
KOG2139|consensus	445		99.04
KOG2106|consensus	626		99.04
KOG0321|consensus	720		99.04
KOG1274|consensus	933		99.03
KOG4328|consensus	498		99.02
KOG2106|consensus	626		98.99
KOG4227|consensus	609		98.98
KOG1523|consensus	361		98.98
KOG0290|consensus	364		98.97
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	98.96
KOG0322|consensus	323		98.95
KOG0974|consensus	967		98.94
KOG1963|consensus	792		98.94
KOG2111|consensus	346		98.93
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	98.93
KOG1063|consensus	764		98.92
KOG1272|consensus	545		98.91
KOG2110|consensus	391		98.87
KOG0649|consensus	325		98.84
KOG1240|consensus	1431		98.84
KOG0280|consensus	339		98.82
KOG1517|consensus	1387		98.81
KOG0974|consensus	967		98.81
PRK11028	330	6-phosphogluconolactonase; Provisional	98.81
COG2319	466	FOG: WD40 repeat [General function prediction only	98.81
KOG1587|consensus	555		98.8
KOG4227|consensus	609		98.79
KOG2321|consensus	703		98.79
KOG1524|consensus	737		98.79
KOG1523|consensus	361		98.78
KOG1310|consensus	758		98.77
KOG1517|consensus	1387		98.77
KOG2315|consensus	566		98.77
PRK05137	435	tolB translocation protein TolB; Provisional	98.76
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	98.76
PRK01742	429	tolB translocation protein TolB; Provisional	98.74
KOG2321|consensus	703		98.73
COG2319	466	FOG: WD40 repeat [General function prediction only	98.71
PRK11028	330	6-phosphogluconolactonase; Provisional	98.7
KOG0280|consensus	339		98.67
KOG0642|consensus	577		98.67
PRK03629	429	tolB translocation protein TolB; Provisional	98.67
KOG1524|consensus	737		98.63
PRK03629	429	tolB translocation protein TolB; Provisional	98.63
PRK01742	429	tolB translocation protein TolB; Provisional	98.62
PRK04922	433	tolB translocation protein TolB; Provisional	98.61
KOG0771|consensus	398		98.59
PRK02889	427	tolB translocation protein TolB; Provisional	98.58
KOG3914|consensus	390		98.57
KOG0650|consensus	733		98.56
PRK04922	433	tolB translocation protein TolB; Provisional	98.55
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	98.52
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	98.52
KOG2139|consensus	445		98.5
PRK00178	430	tolB translocation protein TolB; Provisional	98.5
PRK02889	427	tolB translocation protein TolB; Provisional	98.5
KOG4547|consensus	541		98.5
PRK05137	435	tolB translocation protein TolB; Provisional	98.49
COG4946	668	Uncharacterized protein related to the periplasmic	98.49
KOG4532|consensus	344		98.48
KOG3881|consensus	412		98.47
PRK04792	448	tolB translocation protein TolB; Provisional	98.45
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	98.43
KOG1409|consensus	404		98.41
KOG1587|consensus	555		98.4
KOG1963|consensus	792		98.39
PRK01029	428	tolB translocation protein TolB; Provisional	98.37
KOG1064|consensus	2439		98.32
KOG4714|consensus	319		98.3
KOG4497|consensus	447		98.3
PRK01029	428	tolB translocation protein TolB; Provisional	98.29
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	98.28
KOG4497|consensus	447		98.27
PRK00178	430	tolB translocation protein TolB; Provisional	98.26
PRK04792	448	tolB translocation protein TolB; Provisional	98.24
KOG2695|consensus	425		98.24
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	98.21
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	98.2
KOG2695|consensus	425		98.18
KOG1354|consensus	433		98.18
KOG4714|consensus	319		98.16
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	98.15
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	98.14
KOG2066|consensus	846		98.1
KOG4640|consensus	665		98.06
KOG1538|consensus	1081		98.05
KOG0644|consensus	1113		98.03
PRK04043	419	tolB translocation protein TolB; Provisional	98.03
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	98.01
KOG1240|consensus	1431		98.01
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	98.01
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	97.99
KOG4547|consensus	541		97.95
KOG1409|consensus	404		97.94
KOG4190|consensus	1034		97.94
KOG1912|consensus	1062		97.93
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	97.92
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	97.91
KOG1275|consensus	1118		97.88
COG4946	668	Uncharacterized protein related to the periplasmic	97.86
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	97.85
KOG1064|consensus	2439		97.84
KOG1334|consensus	559		97.84
KOG3914|consensus	390		97.83
KOG1645|consensus	463		97.83
KOG4532|consensus	344		97.83
KOG3621|consensus	726		97.77
KOG2315|consensus	566		97.76
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	97.75
KOG2041|consensus	1189		97.72
KOG1354|consensus	433		97.7
KOG0309|consensus	1081		97.65
KOG1334|consensus	559		97.64
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	97.62
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	97.55
KOG0309|consensus	1081		97.51
KOG1275|consensus	1118		97.49
PRK04043	419	tolB translocation protein TolB; Provisional	97.46
KOG1912|consensus	1062		97.43
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	97.42
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	97.41
KOG1832|consensus	1516		97.41
KOG2314|consensus	698		97.4
KOG4640|consensus	665		97.39
KOG1645|consensus	463		97.35
KOG2314|consensus	698		97.28
PRK02888	635	nitrous-oxide reductase; Validated	97.22
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	97.22
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	97.21
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	97.15
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	97.14
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	97.11
KOG3617|consensus	1416		97.0
KOG0882|consensus	558		96.99
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	96.93
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	96.92
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	96.9
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	96.73
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	96.65
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	96.64
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	96.6
KOG1920|consensus	1265		96.6
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	96.55
KOG2066|consensus	846		96.55
KOG3617|consensus	1416		96.52
KOG2114|consensus	933		96.51
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	96.46
KOG1008|consensus	783		96.46
PRK02888	635	nitrous-oxide reductase; Validated	96.41
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	96.39
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	96.36
KOG1008|consensus	783		96.36
KOG4190|consensus	1034		96.31
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	96.11
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	96.11
KOG2079|consensus	1206		96.11
KOG2395|consensus	644		96.02
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	96.0
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	95.95
KOG3621|consensus	726		95.95
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	95.86
KOG2444|consensus	238		95.79
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	95.67
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	95.63
KOG0882|consensus	558		95.61
KOG1920|consensus	1265		95.41
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	95.31
KOG2041|consensus	1189		95.21
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	95.18
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	95.09
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	95.08
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	94.98
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	94.95
KOG4649|consensus	354		94.77
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	94.71
PRK13616	591	lipoprotein LpqB; Provisional	94.67
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	94.61
KOG2395|consensus	644		94.49
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	94.16
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	94.13
KOG1832|consensus	1516		94.1
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	93.91
COG5167	776	VID27 Protein involved in vacuole import and degra	93.65
KOG2079|consensus	1206		93.55
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	93.49
KOG2444|consensus	238		93.22
KOG4649|consensus	354		92.91
KOG3630|consensus	1405		92.65
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	92.61
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	92.48
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	92.43
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	92.15
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	91.87
KOG4441|consensus	571		91.58
COG3391	381	Uncharacterized conserved protein [Function unknow	91.47
PF07676	39	PD40: WD40-like Beta Propeller Repeat; InterPro: I	91.45
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	91.29
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	90.77
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	90.46
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	90.37
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	89.93
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	89.93
PRK13616	591	lipoprotein LpqB; Provisional	89.79
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	89.32
KOG2114|consensus	933		89.18
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	88.87
PRK10115	686	protease 2; Provisional	88.86
KOG4460|consensus	741		88.71
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	88.54
KOG1916|consensus	1283		88.53
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	88.28
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	88.12
PF01436	28	NHL: NHL repeat; InterPro: IPR001258 The NHL repea	87.76
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	87.37
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	86.99
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	86.93
PHA02713	557	hypothetical protein; Provisional	86.91
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	86.84
COG3391	381	Uncharacterized conserved protein [Function unknow	86.79
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	86.18
KOG4441|consensus	571		85.98
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	85.97
PHA02713	557	hypothetical protein; Provisional	85.97
KOG4499|consensus	310		85.93
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	85.91
KOG4499|consensus	310		85.25
COG4590	733	ABC-type uncharacterized transport system, permeas	84.96
PF12768	281	Rax2: Cortical protein marker for cell polarity	84.83
KOG3630|consensus	1405		84.8
COG5167	776	VID27 Protein involved in vacuole import and degra	84.06
COG5276	370	Uncharacterized conserved protein [Function unknow	83.95
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	82.94
PF03088	89	Str_synth: Strictosidine synthase; InterPro: IPR01	82.32
PHA03098	534	kelch-like protein; Provisional	82.22
PF03088	89	Str_synth: Strictosidine synthase; InterPro: IPR01	81.93
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	81.78
PF10214	765	Rrn6: RNA polymerase I-specific transcription-init	81.63
PRK10115	686	protease 2; Provisional	81.14
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	80.53
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	80.34
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	80.33

>KOG0271|consensus

Probab=99.88  E-value=2.8e-22  Score=141.09  Aligned_cols=117  Identities=22%  Similarity=0.381  Sum_probs=103.4

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..++.|+|+  +..|++|+.|.++|+||+.+.  .+..++++|..+|.+++|+|||+.+++|+.||+|++||.+++    
T Consensus       118 Vl~~~fsp~--g~~l~tGsGD~TvR~WD~~Te--Tp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g  193 (480)
T KOG0271|consen  118 VLSVQFSPT--GSRLVTGSGDTTVRLWDLDTE--TPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIG  193 (480)
T ss_pred             EEEEEecCC--CceEEecCCCceEEeeccCCC--CcceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCccc
Confidence            457788886  899999999999999999998  899999999999999999999999999999999999999887    


Q ss_pred             --cc---ccceEEEEcc-----CCCEEEEEecCCceecCeeEEEeecCCCcceeccCcccC
Q psy7062          90 --FI---QQVNALRITP-----DKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTLVK  140 (148)
Q Consensus        90 --~~---~~i~~~~~sp-----~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~~~~  140 (148)
                        |.   .+|.+++|.|     ..+.|++++.||      .+++||+...+.+....++..
T Consensus       194 ~~l~gH~K~It~Lawep~hl~p~~r~las~skDg------~vrIWd~~~~~~~~~lsgHT~  248 (480)
T KOG0271|consen  194 RALRGHKKWITALAWEPLHLVPPCRRLASSSKDG------SVRIWDTKLGTCVRTLSGHTA  248 (480)
T ss_pred             ccccCcccceeEEeecccccCCCccceecccCCC------CEEEEEccCceEEEEeccCcc
Confidence              44   8899999976     568999999999      999999987666665555443

>KOG0272|consensus

Probab=99.87  E-value=2.3e-22  Score=142.56  Aligned_cols=112  Identities=21%  Similarity=0.356  Sum_probs=101.7

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ...++|+|+  |++|+++|-|.+-++||++++  ..+..-++|...|.+++|.|||..+++|+.|..-++||++++    
T Consensus       264 Vs~VafHPs--G~~L~TasfD~tWRlWD~~tk--~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im  339 (459)
T KOG0272|consen  264 VSRVAFHPS--GKFLGTASFDSTWRLWDLETK--SELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIM  339 (459)
T ss_pred             heeeeecCC--Cceeeecccccchhhcccccc--hhhHhhcccccccceeEecCCCceeeccCccchhheeecccCcEEE
Confidence            357889998  999999999999999999998  667677899999999999999999999999999999999998    


Q ss_pred             -cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          90 -FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        90 -~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                       |.   .+|..+.|+|+|.+|++|+.|+      ++++||++..+....+
T Consensus       340 ~L~gH~k~I~~V~fsPNGy~lATgs~Dn------t~kVWDLR~r~~ly~i  383 (459)
T KOG0272|consen  340 FLAGHIKEILSVAFSPNGYHLATGSSDN------TCKVWDLRMRSELYTI  383 (459)
T ss_pred             EecccccceeeEeECCCceEEeecCCCC------cEEEeeecccccceec
Confidence             33   8899999999999999999988      9999999977764433

>KOG0263|consensus

Probab=99.86  E-value=4.7e-21  Score=144.09  Aligned_cols=108  Identities=22%  Similarity=0.342  Sum_probs=99.9

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---   89 (148)
                      +..|+.|+|+  +.++++||.|.+|++||+.++  ..++.|.+|++.|.+++|||+|++|++|+.|+.|++||+.++   
T Consensus       537 DV~cv~FHPN--s~Y~aTGSsD~tVRlWDv~~G--~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v  612 (707)
T KOG0263|consen  537 DVDCVSFHPN--SNYVATGSSDRTVRLWDVSTG--NSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANGSLV  612 (707)
T ss_pred             ccceEEECCc--ccccccCCCCceEEEEEcCCC--cEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCCcch
Confidence            3468999999  899999999999999999999  889999999999999999999999999999999999999987   


Q ss_pred             --cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 --FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 --~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                        +.   +.+.++.|+.+|..|++++.|.      +|++||+....
T Consensus       613 ~~l~~Ht~ti~SlsFS~dg~vLasgg~Dn------sV~lWD~~~~~  652 (707)
T KOG0263|consen  613 KQLKGHTGTIYSLSFSRDGNVLASGGADN------SVRLWDLTKVI  652 (707)
T ss_pred             hhhhcccCceeEEEEecCCCEEEecCCCC------eEEEEEchhhc
Confidence              22   8899999999999999999977      99999987543

>KOG0279|consensus

Probab=99.83  E-value=2.5e-19  Score=121.69  Aligned_cols=110  Identities=19%  Similarity=0.314  Sum_probs=97.1

Q ss_pred             EEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--cc---
Q psy7062          17 TVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--FI---   91 (148)
Q Consensus        17 ~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--~~---   91 (148)
                      ++..++  |++.++++.|+++++||+.++  +..+.|.+|+..|.+++++||.+.+++|+.|.++++|+....  ++   
T Consensus        69 v~~s~d--g~~alS~swD~~lrlWDl~~g--~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~ck~t~~~  144 (315)
T KOG0279|consen   69 VVLSSD--GNFALSASWDGTLRLWDLATG--ESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVCKYTIHE  144 (315)
T ss_pred             eEEccC--CceEEeccccceEEEEEecCC--cEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeecccEEEEEec
Confidence            344455  999999999999999999998  889999999999999999999999999999999999999877  32   


Q ss_pred             ----ccceEEEEccC--CCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062          92 ----QQVNALRITPD--KQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN  136 (148)
Q Consensus        92 ----~~i~~~~~sp~--~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~  136 (148)
                          ..+.|++|+|+  ...|++++.|+      +|++||+++-+....+.
T Consensus       145 ~~~~~WVscvrfsP~~~~p~Ivs~s~Dk------tvKvWnl~~~~l~~~~~  189 (315)
T KOG0279|consen  145 DSHREWVSCVRFSPNESNPIIVSASWDK------TVKVWNLRNCQLRTTFI  189 (315)
T ss_pred             CCCcCcEEEEEEcCCCCCcEEEEccCCc------eEEEEccCCcchhhccc
Confidence                67999999997  67999999999      99999999776655443

>KOG0272|consensus

Probab=99.83  E-value=1.9e-20  Score=132.92  Aligned_cols=120  Identities=21%  Similarity=0.266  Sum_probs=108.9

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----c
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----F   90 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----~   90 (148)
                      .++.|+|..++.-+++|+.||++++|++++.  .++..+.+|..+|..++|+|+|++|++++.|.+-++||+++.    +
T Consensus       221 ~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e--~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~  298 (459)
T KOG0272|consen  221 GAAVFHPVDSDLNLATASADGTVKLWKLSQE--TPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLL  298 (459)
T ss_pred             eeEEEccCCCccceeeeccCCceeeeccCCC--cchhhhhcchhhheeeeecCCCceeeecccccchhhcccccchhhHh
Confidence            5778888755778999999999999999987  889999999999999999999999999999999999999998    2


Q ss_pred             c----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccCcccCcc
Q psy7062          91 I----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTLVKPQ  142 (148)
Q Consensus        91 ~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~  142 (148)
                      +    ..+.+++|+|||..+++|+-|.      .-++||+++...+..+.+++++-
T Consensus       299 QEGHs~~v~~iaf~~DGSL~~tGGlD~------~~RvWDlRtgr~im~L~gH~k~I  348 (459)
T KOG0272|consen  299 QEGHSKGVFSIAFQPDGSLAATGGLDS------LGRVWDLRTGRCIMFLAGHIKEI  348 (459)
T ss_pred             hcccccccceeEecCCCceeeccCccc------hhheeecccCcEEEEecccccce
Confidence            2    7899999999999999999987      78999999999999888876654

>KOG0266|consensus

Probab=99.82  E-value=7.5e-19  Score=131.23  Aligned_cols=120  Identities=21%  Similarity=0.350  Sum_probs=102.6

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---   89 (148)
                      ....++|+++  +.++++++.|.++++||++.. ...++++.+|...|++++|+|+++.+++|+.|+++++||++++   
T Consensus       205 ~v~~~~fs~d--~~~l~s~s~D~tiriwd~~~~-~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~  281 (456)
T KOG0266|consen  205 GVSDVAFSPD--GSYLLSGSDDKTLRIWDLKDD-GRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECV  281 (456)
T ss_pred             ceeeeEECCC--CcEEEEecCCceEEEeeccCC-CeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEE
Confidence            4567888888  789999999999999999432 2778999999999999999999999999999999999999987   


Q ss_pred             --cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc--ceeccCcccCc
Q psy7062          90 --FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA--AVVASNTLVKP  141 (148)
Q Consensus        90 --~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~  141 (148)
                        +.   .++.+++|++++++|++++.|+      .|++||+.+..  ..........+
T Consensus       282 ~~l~~hs~~is~~~f~~d~~~l~s~s~d~------~i~vwd~~~~~~~~~~~~~~~~~~  334 (456)
T KOG0266|consen  282 RKLKGHSDGISGLAFSPDGNLLVSASYDG------TIRVWDLETGSKLCLKLLSGAENS  334 (456)
T ss_pred             EeeeccCCceEEEEECCCCCEEEEcCCCc------cEEEEECCCCceeeeecccCCCCC
Confidence              33   8899999999999999999988      99999999877  23444433333

>KOG0263|consensus

Probab=99.82  E-value=1e-19  Score=136.93  Aligned_cols=117  Identities=23%  Similarity=0.325  Sum_probs=104.5

Q ss_pred             EEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc
Q psy7062          17 TVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI   91 (148)
Q Consensus        17 ~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~   91 (148)
                      +.|+|.  |-++|+++.|++.++|.....  .+++.+.+|-+.|.|++|+|+..++++||.|.++++||+.++     |.
T Consensus       499 V~F~P~--GyYFatas~D~tArLWs~d~~--~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~  574 (707)
T KOG0263|consen  499 VQFAPR--GYYFATASHDQTARLWSTDHN--KPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFT  574 (707)
T ss_pred             EEecCC--ceEEEecCCCceeeeeecccC--CchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEec
Confidence            445565  999999999999999999987  899999999999999999999999999999999999999998     54


Q ss_pred             ---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccCcccCccee
Q psy7062          92 ---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTLVKPQVT  144 (148)
Q Consensus        92 ---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~  144 (148)
                         ++|.+++|||+|++|++|+.|+      .|.+||+.+.+.+....++ +..+.
T Consensus       575 GH~~~V~al~~Sp~Gr~LaSg~ed~------~I~iWDl~~~~~v~~l~~H-t~ti~  623 (707)
T KOG0263|consen  575 GHKGPVTALAFSPCGRYLASGDEDG------LIKIWDLANGSLVKQLKGH-TGTIY  623 (707)
T ss_pred             CCCCceEEEEEcCCCceEeecccCC------cEEEEEcCCCcchhhhhcc-cCcee
Confidence               9999999999999999999999      9999999988877666555 44443

>PTZ00421 coronin; Provisional

Probab=99.81  E-value=2.5e-18  Score=128.95  Aligned_cols=116  Identities=16%  Similarity=0.257  Sum_probs=97.2

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCC-----CCceEEecCCCCCEEEEEEccCC-CEEEEEeCCCcEEEEECC
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNN-----PNPVINCEGVSKNVVEVGFQEDG-KWMFTGGEDCRARIWDLS   87 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~-----~~~~~~~~~~~~~i~~~~~sp~~-~~l~~~~~~~~i~l~d~~   87 (148)
                      ..+++|+|. ++++|++|+.|++|++||+.+..     ..++..+.+|...|.+++|+|++ .++++++.|+++++||++
T Consensus        78 V~~v~fsP~-d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~  156 (493)
T PTZ00421         78 IIDVAFNPF-DPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVE  156 (493)
T ss_pred             EEEEEEcCC-CCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECC
Confidence            357778773 27799999999999999997641     13567788999999999999975 699999999999999998


Q ss_pred             cc-----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062          88 LC-----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN  136 (148)
Q Consensus        88 ~~-----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~  136 (148)
                      ++     +.   ..+.+++|+|+++.|++++.|+      +|++||+++.+.+....
T Consensus       157 tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg------~IrIwD~rsg~~v~tl~  207 (493)
T PTZ00421        157 RGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDK------KLNIIDPRDGTIVSSVE  207 (493)
T ss_pred             CCeEEEEEcCCCCceEEEEEECCCCEEEEecCCC------EEEEEECCCCcEEEEEe
Confidence            77     32   6799999999999999999988      99999999877654443

>KOG0279|consensus

Probab=99.80  E-value=1.7e-18  Score=117.63  Aligned_cols=113  Identities=19%  Similarity=0.281  Sum_probs=100.3

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..++.|+|+....++++++.|+++++||+++-  +....+.+|+..++.+.+||||...++|++||.+.+||++..    
T Consensus       151 VscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~--~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~ly  228 (315)
T KOG0279|consen  151 VSCVRFSPNESNPIIVSASWDKTVKVWNLRNC--QLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLY  228 (315)
T ss_pred             EEEEEEcCCCCCcEEEEccCCceEEEEccCCc--chhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeE
Confidence            46899999988999999999999999999998  788889999999999999999999999999999999999887    


Q ss_pred             -cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          90 -FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        90 -~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                       +.  ..|.+++|+|+.-+|+.+...       .|++||+.+...+..+
T Consensus       229 sl~a~~~v~sl~fspnrywL~~at~~-------sIkIwdl~~~~~v~~l  270 (315)
T KOG0279|consen  229 SLEAFDIVNSLCFSPNRYWLCAATAT-------SIKIWDLESKAVVEEL  270 (315)
T ss_pred             eccCCCeEeeEEecCCceeEeeccCC-------ceEEEeccchhhhhhc
Confidence             33  889999999999988877653       4999999876655544

>KOG0273|consensus

Probab=99.79  E-value=3.2e-18  Score=123.19  Aligned_cols=113  Identities=15%  Similarity=0.309  Sum_probs=101.7

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCC---------CEEEEEeCCCcEEEE
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDG---------KWMFTGGEDCRARIW   84 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~---------~~l~~~~~~~~i~l~   84 (148)
                      ..++.|+|.  +.+|+++++|+++++|.....  .....+.+|...|+.+.|+|.|         ..+++++.|+++++|
T Consensus       362 V~alk~n~t--g~LLaS~SdD~TlkiWs~~~~--~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lw  437 (524)
T KOG0273|consen  362 VNALKWNPT--GSLLASCSDDGTLKIWSMGQS--NSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLW  437 (524)
T ss_pred             eEEEEECCC--CceEEEecCCCeeEeeecCCC--cchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEE
Confidence            478888888  999999999999999999887  7889999999999999999876         368999999999999


Q ss_pred             ECCcc-----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062          85 DLSLC-----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN  136 (148)
Q Consensus        85 d~~~~-----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~  136 (148)
                      |+..+     |.   .++.+++|+|+|+++++|+.|+      .|.+|+.++.+..+.+.
T Consensus       438 dv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg------~V~iws~~~~~l~~s~~  491 (524)
T KOG0273|consen  438 DVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDG------CVHIWSTKTGKLVKSYQ  491 (524)
T ss_pred             EccCCceeEeeccCCCceEEEEecCCCcEEEecCCCC------eeEeccccchheeEeec
Confidence            99998     42   8999999999999999999999      99999999887766553

>KOG0286|consensus

Probab=99.78  E-value=6.9e-18  Score=115.48  Aligned_cols=104  Identities=17%  Similarity=0.337  Sum_probs=95.0

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEECCcc-----cc---ccce
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIWDLSLC-----FI---QQVN   95 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d~~~~-----~~---~~i~   95 (148)
                      ...+++++.|.++-+||++++  +.+..|.+|...|.+++++| +++.+++|+.|...++||++.+     |.   ..|+
T Consensus       156 D~~ilT~SGD~TCalWDie~g--~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDIN  233 (343)
T KOG0286|consen  156 DNHILTGSGDMTCALWDIETG--QQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDIN  233 (343)
T ss_pred             CCceEecCCCceEEEEEcccc--eEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCcceeEeecccccccc
Confidence            345677799999999999999  89999999999999999999 9999999999999999999998     54   8899


Q ss_pred             EEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062          96 ALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN  136 (148)
Q Consensus        96 ~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~  136 (148)
                      +++|.|+|.-+++|++|+      +.++||++..+++..++
T Consensus       234 sv~ffP~G~afatGSDD~------tcRlyDlRaD~~~a~ys  268 (343)
T KOG0286|consen  234 SVRFFPSGDAFATGSDDA------TCRLYDLRADQELAVYS  268 (343)
T ss_pred             eEEEccCCCeeeecCCCc------eeEEEeecCCcEEeeec
Confidence            999999999999999988      99999999887766554

>KOG0266|consensus

Probab=99.78  E-value=1e-17  Score=125.20  Aligned_cols=115  Identities=18%  Similarity=0.284  Sum_probs=102.0

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-c--
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-F--   90 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-~--   90 (148)
                      ..+++|++.  ++++++|+.|++|++||++++  +.+..+.+|...|++++|+++++.+++++.|+.+++||+.++ +  
T Consensus       249 v~~~~f~p~--g~~i~Sgs~D~tvriWd~~~~--~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~  324 (456)
T KOG0266|consen  249 VTSVAFSPD--GNLLVSGSDDGTVRIWDVRTG--ECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGSKLC  324 (456)
T ss_pred             eEEEEecCC--CCEEEEecCCCcEEEEeccCC--eEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEEECCCCceee
Confidence            367777787  799999999999999999998  899999999999999999999999999999999999999887 1  


Q ss_pred             ----c----c-cceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccCcc
Q psy7062          91 ----I----Q-QVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTL  138 (148)
Q Consensus        91 ----~----~-~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~~  138 (148)
                          .    . ++.+++|+|++.+++++..|+      .+++||+.....+..+..+
T Consensus       325 ~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~------~~~~w~l~~~~~~~~~~~~  375 (456)
T KOG0266|consen  325 LKLLSGAENSAPVTSVQFSPNGKYLLSASLDR------TLKLWDLRSGKSVGTYTGH  375 (456)
T ss_pred             eecccCCCCCCceeEEEECCCCcEEEEecCCC------eEEEEEccCCcceeeeccc
Confidence                1    3 579999999999999999988      9999999987766555433

>PTZ00420 coronin; Provisional

Probab=99.78  E-value=3.3e-17  Score=124.18  Aligned_cols=117  Identities=15%  Similarity=0.240  Sum_probs=95.3

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCC------CceEEecCCCCCEEEEEEccCCCE-EEEEeCCCcEEEEEC
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNP------NPVINCEGVSKNVVEVGFQEDGKW-MFTGGEDCRARIWDL   86 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~------~~~~~~~~~~~~i~~~~~sp~~~~-l~~~~~~~~i~l~d~   86 (148)
                      ..+++|+|.. +.+|++|+.|++|++||+.+...      .++..+.+|...|.+++|+|++.. +++++.|+++++||+
T Consensus        77 V~~lafsP~~-~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl  155 (568)
T PTZ00420         77 ILDLQFNPCF-SEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDI  155 (568)
T ss_pred             EEEEEEcCCC-CCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEEC
Confidence            3567777642 67999999999999999976411      134567789999999999999875 578999999999999


Q ss_pred             Ccc-----cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccCc
Q psy7062          87 SLC-----FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNT  137 (148)
Q Consensus        87 ~~~-----~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~  137 (148)
                      +++     +.  ..+.+++|+|+|.+|++++.|+      +|++||+++...+.....
T Consensus       156 ~tg~~~~~i~~~~~V~SlswspdG~lLat~s~D~------~IrIwD~Rsg~~i~tl~g  207 (568)
T PTZ00420        156 ENEKRAFQINMPKKLSSLKWNIKGNLLSGTCVGK------HMHIIDPRKQEIASSFHI  207 (568)
T ss_pred             CCCcEEEEEecCCcEEEEEECCCCCEEEEEecCC------EEEEEECCCCcEEEEEec
Confidence            887     22  6799999999999999999888      999999998776655443

>KOG0271|consensus

Probab=99.78  E-value=2.7e-18  Score=121.23  Aligned_cols=102  Identities=18%  Similarity=0.316  Sum_probs=95.3

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      .+.+.|+|+  +.++|+++-|.+|++||-+++  +.+.+|++|-..|+.++|+.|.+.+++|+.|.++++||+++.    
T Consensus       370 Vn~V~fSPd--~r~IASaSFDkSVkLW~g~tG--k~lasfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkKl~~  445 (480)
T KOG0271|consen  370 VNHVSFSPD--GRYIASASFDKSVKLWDGRTG--KFLASFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRTKKLKQ  445 (480)
T ss_pred             eeeEEECCC--ccEEEEeecccceeeeeCCCc--chhhhhhhccceeEEEEeccCccEEEEcCCCceEEEEEeeeeeecc
Confidence            367888898  999999999999999999999  999999999999999999999999999999999999999987    


Q ss_pred             -cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEee
Q psy7062          90 -FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYN  125 (148)
Q Consensus        90 -~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d  125 (148)
                       +.   ..++++.|+|||+.+++|+.|.      .+++|.
T Consensus       446 DLpGh~DEVf~vDwspDG~rV~sggkdk------v~~lw~  479 (480)
T KOG0271|consen  446 DLPGHADEVFAVDWSPDGQRVASGGKDK------VLRLWR  479 (480)
T ss_pred             cCCCCCceEEEEEecCCCceeecCCCce------EEEeec
Confidence             33   8899999999999999999988      888884

>KOG0285|consensus

Probab=99.77  E-value=1e-17  Score=117.47  Aligned_cols=116  Identities=21%  Similarity=0.316  Sum_probs=104.5

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..+++++|-  ++.|++|+.|+++++||+.++  +...++.+|...+..+++|+..-++++++.|+.++.||+...    
T Consensus       154 Vr~vavdP~--n~wf~tgs~DrtikIwDlatg--~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nkvIR  229 (460)
T KOG0285|consen  154 VRSVAVDPG--NEWFATGSADRTIKIWDLATG--QLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNKVIR  229 (460)
T ss_pred             EEEEeeCCC--ceeEEecCCCceeEEEEcccC--eEEEeecchhheeeeeeecccCceEEEecCCCeeEEEechhhhhHH
Confidence            468888887  899999999999999999999  888899999999999999999999999999999999999877    


Q ss_pred             -cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccCccc
Q psy7062          90 -FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTLV  139 (148)
Q Consensus        90 -~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~~~  139 (148)
                       +.   +.+.+++.+|.-..|+++++|.      .+++||+++...+..+.++-
T Consensus       230 ~YhGHlS~V~~L~lhPTldvl~t~grDs------t~RvWDiRtr~~V~~l~GH~  277 (460)
T KOG0285|consen  230 HYHGHLSGVYCLDLHPTLDVLVTGGRDS------TIRVWDIRTRASVHVLSGHT  277 (460)
T ss_pred             HhccccceeEEEeccccceeEEecCCcc------eEEEeeecccceEEEecCCC
Confidence             22   8899999999999999999988      99999999887776655443

>KOG0315|consensus

Probab=99.76  E-value=3.6e-17  Score=110.00  Aligned_cols=106  Identities=40%  Similarity=0.685  Sum_probs=94.3

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----   89 (148)
                      +.+...|+  +.+||+ .....||+||+++.+..++.++.+|+..|+.+.|.-+|+++++|+.||++++||+++.     
T Consensus        44 NrLeiTpd--k~~LAa-a~~qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~  120 (311)
T KOG0315|consen   44 NRLEITPD--KKDLAA-AGNQHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRN  120 (311)
T ss_pred             eeEEEcCC--cchhhh-ccCCeeEEEEccCCCCCceeEEeccCCceEEEEEeecCeEEEecCCCceEEEEeccCcccchh
Confidence            45555666  888888 4468999999999877799999999999999999999999999999999999999987     


Q ss_pred             cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          90 FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        90 ~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                      |+  ++++++..+|+...|+++..+|      .|++||+...
T Consensus       121 ~~~~spVn~vvlhpnQteLis~dqsg------~irvWDl~~~  156 (311)
T KOG0315|consen  121 YQHNSPVNTVVLHPNQTELISGDQSG------NIRVWDLGEN  156 (311)
T ss_pred             ccCCCCcceEEecCCcceEEeecCCC------cEEEEEccCC
Confidence            44  9999999999999999999877      9999998754

>KOG0277|consensus

Probab=99.76  E-value=2.1e-17  Score=111.30  Aligned_cols=130  Identities=12%  Similarity=0.108  Sum_probs=101.2

Q ss_pred             eeecCcEEEEEe--CCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEE
Q psy7062           9 LTAFGQISTVFD--SKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIWD   85 (148)
Q Consensus         9 ~~~~~~~~~~~~--~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d   85 (148)
                      .+.+..+..+.|  +.. ++.+++++-|++|++|+...+  +.+.++.+|...|....|+| .++.+++++.|+++++||
T Consensus       100 ~kEH~~EV~Svdwn~~~-r~~~ltsSWD~TiKLW~~~r~--~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwd  176 (311)
T KOG0277|consen  100 FKEHKREVYSVDWNTVR-RRIFLTSSWDGTIKLWDPNRP--NSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWD  176 (311)
T ss_pred             HHhhhhheEEecccccc-ceeEEeeccCCceEeecCCCC--cceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEE
Confidence            344444444444  433 566666699999999999988  89999999999999999999 678999999999999999


Q ss_pred             CCcc-----cc---ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeecCCCcceeccCcccCcceeecc
Q psy7062          86 LSLC-----FI---QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTLVKPQVTRAK  147 (148)
Q Consensus        86 ~~~~-----~~---~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~  147 (148)
                      ++..     ++   ..+.+..|+. +...+++++.|+      .|+.||+++.+.+...--.+.-.+.|+|
T Consensus       177 vr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~------~vr~wDir~~r~pl~eL~gh~~AVRkvk  241 (311)
T KOG0277|consen  177 VRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDN------LVRGWDIRNLRTPLFELNGHGLAVRKVK  241 (311)
T ss_pred             ecCCCceeEEEeccceeEeecccccCCcEEEecCCCc------eEEEEehhhccccceeecCCceEEEEEe
Confidence            9876     33   5799999998 778899999988      9999999987755433333444444443

>KOG0284|consensus

Probab=99.75  E-value=5.1e-18  Score=120.39  Aligned_cols=113  Identities=14%  Similarity=0.205  Sum_probs=99.4

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---   89 (148)
                      ...+++|+|+  ...++++++|++|++||....  +..+.+.+|...|.+++|+|....+++++.|..+++||.+++   
T Consensus       182 aIRdlafSpn--DskF~t~SdDg~ikiWdf~~~--kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~cl  257 (464)
T KOG0284|consen  182 AIRDLAFSPN--DSKFLTCSDDGTIKIWDFRMP--KEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCL  257 (464)
T ss_pred             hhheeccCCC--CceeEEecCCCeEEEEeccCC--chhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCcchh
Confidence            4578899986  567888899999999999988  667778999999999999999999999999999999999998   


Q ss_pred             --cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          90 --FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        90 --~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                        +.   .-|..+.|+|++++|+++++|.      .++++|+++.+....+
T Consensus       258 ~tlh~HKntVl~~~f~~n~N~Llt~skD~------~~kv~DiR~mkEl~~~  302 (464)
T KOG0284|consen  258 ATLHGHKNTVLAVKFNPNGNWLLTGSKDQ------SCKVFDIRTMKELFTY  302 (464)
T ss_pred             hhhhhccceEEEEEEcCCCCeeEEccCCc------eEEEEehhHhHHHHHh
Confidence              22   7799999999999999999988      9999999965554433

>KOG0302|consensus

Probab=99.74  E-value=4.5e-17  Score=114.75  Aligned_cols=109  Identities=16%  Similarity=0.328  Sum_probs=91.1

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ...+.|+|.. ..+|++||-|++|++||++.+..+.-...+.|.+.|+-|+|+.+-.+|++|+.||++++||++..    
T Consensus       260 VEDLqWSptE-~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~  338 (440)
T KOG0302|consen  260 VEDLQWSPTE-DGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQ  338 (440)
T ss_pred             hhhhccCCcc-CceEEeeecCceEEEEEecCCCccceeEeeccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCCC
Confidence            3567788876 68999999999999999998743444444789999999999998779999999999999999876    


Q ss_pred             ----cc---ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          90 ----FI---QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        90 ----~~---~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                          |+   .+|.++.|+| +...|++++.|.      +|.+||+...
T Consensus       339 pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~------QitiWDlsvE  380 (440)
T KOG0302|consen  339 PVATFKYHKAPITSIEWHPHEDSVIAASGEDN------QITIWDLSVE  380 (440)
T ss_pred             cceeEEeccCCeeEEEeccccCceEEeccCCC------cEEEEEeecc
Confidence                43   9999999999 455777778777      8999998743

>KOG0286|consensus

Probab=99.73  E-value=1.9e-16  Score=108.50  Aligned_cols=109  Identities=18%  Similarity=0.237  Sum_probs=96.0

Q ss_pred             EEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----c
Q psy7062          16 STVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----F   90 (148)
Q Consensus        16 ~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~   90 (148)
                      ++++.|. .++.+++|+-|.+.++||++.+  ....+|.+|.+.|.+++|.|+|.-+++|+.|++.++||++..     |
T Consensus       191 slsl~p~-~~ntFvSg~cD~~aklWD~R~~--~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~y  267 (343)
T KOG0286|consen  191 SLSLSPS-DGNTFVSGGCDKSAKLWDVRSG--QCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVY  267 (343)
T ss_pred             EEecCCC-CCCeEEecccccceeeeeccCc--ceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeee
Confidence            3344453 5899999999999999999998  899999999999999999999999999999999999999985     3


Q ss_pred             c-----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCccee
Q psy7062          91 I-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVV  133 (148)
Q Consensus        91 ~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~  133 (148)
                      .     .++.+++||..|++|+.|-.|.      .+.+||.-..+...
T Consensus       268 s~~~~~~gitSv~FS~SGRlLfagy~d~------~c~vWDtlk~e~vg  309 (343)
T KOG0286|consen  268 SHDSIICGITSVAFSKSGRLLFAGYDDF------TCNVWDTLKGERVG  309 (343)
T ss_pred             ccCcccCCceeEEEcccccEEEeeecCC------ceeEeeccccceEE
Confidence            3     8899999999999999998877      89999977555443

>KOG0269|consensus

Probab=99.72  E-value=7e-17  Score=122.05  Aligned_cols=109  Identities=17%  Similarity=0.222  Sum_probs=95.5

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEECCcc---
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d~~~~---   89 (148)
                      ...+.|++.+ ..+|++|+.|++|++||++..  ....++.+....|..++|+| .+..++++...|.+++||++..   
T Consensus       136 ~~~ldfh~te-p~iliSGSQDg~vK~~DlR~~--~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~  212 (839)
T KOG0269|consen  136 ANKLDFHSTE-PNILISGSQDGTVKCWDLRSK--KSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRC  212 (839)
T ss_pred             eeeeeeccCC-ccEEEecCCCceEEEEeeecc--cccccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchhH
Confidence            4567777654 689999999999999999998  77778887788899999999 6789999999999999999987   


Q ss_pred             ---cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          90 ---FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        90 ---~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                         |.   +++.|+.|+|++.+|++|++|+      +|++||...+..
T Consensus       213 ~~k~~AH~GpV~c~nwhPnr~~lATGGRDK------~vkiWd~t~~~~  254 (839)
T KOG0269|consen  213 EKKLTAHNGPVLCLNWHPNREWLATGGRDK------MVKIWDMTDSRA  254 (839)
T ss_pred             HHHhhcccCceEEEeecCCCceeeecCCCc------cEEEEeccCCCc
Confidence               32   9999999999999999999999      999999886543

>KOG0319|consensus

Probab=99.72  E-value=1e-16  Score=120.57  Aligned_cols=114  Identities=15%  Similarity=0.174  Sum_probs=103.6

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---   89 (148)
                      ..++++++|+  ..++|+||.|.+.++|++++.  ..+.++.+|+..+.++.|+|..+.++++|.|.++++|.+.+.   
T Consensus       465 dIN~Vaia~n--dkLiAT~SqDktaKiW~le~~--~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSCl  540 (775)
T KOG0319|consen  465 DINCVAIAPN--DKLIATGSQDKTAKIWDLEQL--RLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCL  540 (775)
T ss_pred             cccceEecCC--CceEEecccccceeeecccCc--eEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceee
Confidence            4688898888  899999999999999999977  889999999999999999999999999999999999999988   


Q ss_pred             --cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062          90 --FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN  136 (148)
Q Consensus        90 --~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~  136 (148)
                        |.   ..+..+.|-.++.+|++++.||      -+++|++.+.....++.
T Consensus       541 kT~eGH~~aVlra~F~~~~~qliS~~adG------liKlWnikt~eC~~tlD  586 (775)
T KOG0319|consen  541 KTFEGHTSAVLRASFIRNGKQLISAGADG------LIKLWNIKTNECEMTLD  586 (775)
T ss_pred             eeecCccceeEeeeeeeCCcEEEeccCCC------cEEEEeccchhhhhhhh
Confidence              44   7788899999999999999999      99999999877665543

>KOG0295|consensus

Probab=99.72  E-value=3.1e-16  Score=110.02  Aligned_cols=115  Identities=18%  Similarity=0.243  Sum_probs=89.7

Q ss_pred             cCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeC--------------
Q psy7062          12 FGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE--------------   77 (148)
Q Consensus        12 ~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~--------------   77 (148)
                      ++..++.|=|.  |+++++++.|.+|++|++.++  -.+.++.+|...|..++.+.||..+++++.              
T Consensus       194 h~vS~V~f~P~--gd~ilS~srD~tik~We~~tg--~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~  269 (406)
T KOG0295|consen  194 HGVSSVFFLPL--GDHILSCSRDNTIKAWECDTG--YCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQC  269 (406)
T ss_pred             cceeeEEEEec--CCeeeecccccceeEEecccc--eeEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchh
Confidence            34566777777  799999999999999999998  788888888777766666666666666664              


Q ss_pred             -------------------------------------------CCcEEEEECCcc---cc-----ccceEEEEccCCCEE
Q psy7062          78 -------------------------------------------DCRARIWDLSLC---FI-----QQVNALRITPDKQLL  106 (148)
Q Consensus        78 -------------------------------------------~~~i~l~d~~~~---~~-----~~i~~~~~sp~~~~l  106 (148)
                                                                 |++|++||+.++   |.     .+++.++|+|.|++|
T Consensus       270 k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi  349 (406)
T KOG0295|consen  270 KAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYI  349 (406)
T ss_pred             hhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCCCeEE
Confidence                                                       445555555544   22     789999999999999


Q ss_pred             EEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062         107 ASAEELSCCYCGAAVFVYNSCYPAAVVASN  136 (148)
Q Consensus       107 ~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~  136 (148)
                      +++.+|+      ++++||+.+.+....++
T Consensus       350 ~ScaDDk------tlrvwdl~~~~cmk~~~  373 (406)
T KOG0295|consen  350 LSCADDK------TLRVWDLKNLQCMKTLE  373 (406)
T ss_pred             EEEecCC------cEEEEEeccceeeeccC
Confidence            9999988      99999999877655444

>KOG0284|consensus

Probab=99.71  E-value=7.2e-17  Score=114.63  Aligned_cols=115  Identities=19%  Similarity=0.370  Sum_probs=98.9

Q ss_pred             eeecC--cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEEC
Q psy7062           9 LTAFG--QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL   86 (148)
Q Consensus         9 ~~~~~--~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~   86 (148)
                      ++.++  ..+++|+|.  ..++++++.|..|++||.+++  +++.++.+|+..|..+.|+|++++|+++++|..++++|+
T Consensus       218 L~GHgwdVksvdWHP~--kgLiasgskDnlVKlWDprSg--~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~Di  293 (464)
T KOG0284|consen  218 LRGHGWDVKSVDWHPT--KGLIASGSKDNLVKLWDPRSG--SCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDI  293 (464)
T ss_pred             eccCCCCcceeccCCc--cceeEEccCCceeEeecCCCc--chhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEeh
Confidence            34454  467888887  789999999999999999999  999999999999999999999999999999999999999


Q ss_pred             Ccc-----cc---ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeecCCCccee
Q psy7062          87 SLC-----FI---QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNSCYPAAVV  133 (148)
Q Consensus        87 ~~~-----~~---~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~  133 (148)
                      ++.     ++   ..++++.|+| ....|.+++.|+      .|..|.+....+..
T Consensus       294 R~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dg------svvh~~v~~~~p~~  343 (464)
T KOG0284|consen  294 RTMKELFTYRGHKKDVTSLTWHPLNESLFTSGGSDG------SVVHWVVGLEEPLG  343 (464)
T ss_pred             hHhHHHHHhhcchhhheeeccccccccceeeccCCC------ceEEEecccccccc
Confidence            965     33   7799999999 677888899988      88888876444433

>KOG0283|consensus

Probab=99.71  E-value=1e-16  Score=121.59  Aligned_cols=102  Identities=16%  Similarity=0.202  Sum_probs=90.8

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEECCcc-------ccccceE
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIWDLSLC-------FIQQVNA   96 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d~~~~-------~~~~i~~   96 (148)
                      +++|.+++.|.+||+|++...  .++..|. |...|+|++|+| |.+++++|+.|++++||++...       +..-|++
T Consensus       380 n~fLLSSSMDKTVRLWh~~~~--~CL~~F~-HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~~lITA  456 (712)
T KOG0283|consen  380 NNFLLSSSMDKTVRLWHPGRK--ECLKVFS-HNDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDLRDLITA  456 (712)
T ss_pred             CCeeEeccccccEEeecCCCc--ceeeEEe-cCCeeEEEEecccCCCcEeecccccceEEeecCcCeeEeehhhhhhhee
Confidence            577888899999999999988  8999997 999999999999 8899999999999999999877       2277999


Q ss_pred             EEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          97 LRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        97 ~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                      ++|.|+|+..+.|+.+|      .+++|+....+.....
T Consensus       457 vcy~PdGk~avIGt~~G------~C~fY~t~~lk~~~~~  489 (712)
T KOG0283|consen  457 VCYSPDGKGAVIGTFNG------YCRFYDTEGLKLVSDF  489 (712)
T ss_pred             EEeccCCceEEEEEecc------EEEEEEccCCeEEEee
Confidence            99999999999999988      8999998866655443

>KOG0291|consensus

Probab=99.71  E-value=5.1e-16  Score=117.38  Aligned_cols=121  Identities=17%  Similarity=0.264  Sum_probs=105.6

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..+++|+|+  |+++++|++|+.|++||..++  -+..+|..|++.|+.+.|+..|+.+++.+.||+++.||++..    
T Consensus       353 i~~l~YSpD--gq~iaTG~eDgKVKvWn~~Sg--fC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfR  428 (893)
T KOG0291|consen  353 ITSLAYSPD--GQLIATGAEDGKVKVWNTQSG--FCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFR  428 (893)
T ss_pred             eeeEEECCC--CcEEEeccCCCcEEEEeccCc--eEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceee
Confidence            478889998  999999999999999999998  899999999999999999999999999999999999999876    


Q ss_pred             -cc----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccCcccCcce
Q psy7062          90 -FI----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTLVKPQV  143 (148)
Q Consensus        90 -~~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~  143 (148)
                       |.    ....|++..|.|..+..|+.|.     ..|++|+..+++....+.++-.|-.
T Consensus       429 Tft~P~p~QfscvavD~sGelV~AG~~d~-----F~IfvWS~qTGqllDiLsGHEgPVs  482 (893)
T KOG0291|consen  429 TFTSPEPIQFSCVAVDPSGELVCAGAQDS-----FEIFVWSVQTGQLLDILSGHEGPVS  482 (893)
T ss_pred             eecCCCceeeeEEEEcCCCCEEEeeccce-----EEEEEEEeecCeeeehhcCCCCcce
Confidence             33    5567788888899888887744     3699999999988777776666643

>KOG0291|consensus

Probab=99.71  E-value=2.8e-16  Score=118.77  Aligned_cols=112  Identities=21%  Similarity=0.245  Sum_probs=98.1

Q ss_pred             EEEEEeCCCCccEEEEEecCC-eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQ-HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~-~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      .+++.||.  |++++.|+.|. .|.+|+++++  +.+..+.+|.+.|.+++|+|++..|+++++|.++++||+-..    
T Consensus       439 scvavD~s--GelV~AG~~d~F~IfvWS~qTG--qllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~v  514 (893)
T KOG0291|consen  439 SCVAVDPS--GELVCAGAQDSFEIFVWSVQTG--QLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGTV  514 (893)
T ss_pred             eEEEEcCC--CCEEEeeccceEEEEEEEeecC--eeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeeccCcee
Confidence            46666776  99999988877 6999999999  899999999999999999999999999999999999999765    


Q ss_pred             --cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062          90 --FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN  136 (148)
Q Consensus        90 --~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~  136 (148)
                        ++  ..+..+.|+|+|+.|+++.-||      .|.+||.........++
T Consensus       515 Etl~i~sdvl~vsfrPdG~elaVaTldg------qItf~d~~~~~q~~~Id  559 (893)
T KOG0291|consen  515 ETLEIRSDVLAVSFRPDGKELAVATLDG------QITFFDIKEAVQVGSID  559 (893)
T ss_pred             eeEeeccceeEEEEcCCCCeEEEEEecc------eEEEEEhhhceeecccc
Confidence              33  7799999999999999999988      99999988665554443

>KOG0315|consensus

Probab=99.70  E-value=7.6e-16  Score=103.68  Aligned_cols=121  Identities=16%  Similarity=0.160  Sum_probs=105.0

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCC----CCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNN----PNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~----~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-   89 (148)
                      ..+...++  |.+++.+...|.+.+|++-+..    .+++..++.|...+..+.+|||+++|++++.|.++++|+.... 
T Consensus       171 ~sl~v~~d--gsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~~  248 (311)
T KOG0315|consen  171 QSLTVMPD--GSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDFF  248 (311)
T ss_pred             eeEEEcCC--CcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCce
Confidence            34445566  9999999999999999997542    1356678889999999999999999999999999999999887 


Q ss_pred             -----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccCcccCcce
Q psy7062          90 -----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTLVKPQV  143 (148)
Q Consensus        90 -----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~  143 (148)
                           ++   .+++..+||.|+++|++++.|.      .+++||++..+.+..+.+.+++.+
T Consensus       249 kle~~l~gh~rWvWdc~FS~dg~YlvTassd~------~~rlW~~~~~k~v~qy~gh~K~~v  304 (311)
T KOG0315|consen  249 KLELVLTGHQRWVWDCAFSADGEYLVTASSDH------TARLWDLSAGKEVRQYQGHHKAAV  304 (311)
T ss_pred             eeEEEeecCCceEEeeeeccCccEEEecCCCC------ceeecccccCceeeecCCcccccE
Confidence                 22   5899999999999999999988      999999999999999999988865

>KOG1446|consensus

Probab=99.70  E-value=1.8e-15  Score=104.32  Aligned_cols=125  Identities=20%  Similarity=0.246  Sum_probs=104.5

Q ss_pred             ccceeeecCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecC---CCCCEEEEEEccCCCEEEEEeCCCcE
Q psy7062           5 LGGILTAFGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEG---VSKNVVEVGFQEDGKWMFTGGEDCRA   81 (148)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~---~~~~i~~~~~sp~~~~l~~~~~~~~i   81 (148)
                      -.|++...+.+++||||.  |-++|++.....|++||++.....+..++.-   ....++.+.|||||+.++.++..+.+
T Consensus       134 cqg~l~~~~~pi~AfDp~--GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~  211 (311)
T KOG1446|consen  134 CQGLLNLSGRPIAAFDPE--GLIFALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFI  211 (311)
T ss_pred             CceEEecCCCcceeECCC--CcEEEEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcE
Confidence            467888899999999999  8999998877799999999764455555543   36789999999999999999999999


Q ss_pred             EEEECCcc-----cc------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccCc
Q psy7062          82 RIWDLSLC-----FI------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNT  137 (148)
Q Consensus        82 ~l~d~~~~-----~~------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~  137 (148)
                      ++.|.-++     |.      .-.....|+||++++++++.||      +|.+|+++++..+....+
T Consensus       212 ~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~dg------~i~vw~~~tg~~v~~~~~  272 (311)
T KOG1446|consen  212 YLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKFVLSGSDDG------TIHVWNLETGKKVAVLRG  272 (311)
T ss_pred             EEEEccCCcEeeeEeeccCCCCcceeEEECCCCcEEEEecCCC------cEEEEEcCCCcEeeEecC
Confidence            99999888     22      2235678999999999999999      999999998877766655

>KOG0277|consensus

Probab=99.70  E-value=2.8e-16  Score=105.97  Aligned_cols=114  Identities=18%  Similarity=0.324  Sum_probs=94.9

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEECCcc--
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIWDLSLC--   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d~~~~--   89 (148)
                      +-..++|+++... .+++++.||++++||..-+ ..++..++.|...|.++.|++ +...++++++|++|++||...+  
T Consensus        62 ~LfdV~Wse~~e~-~~~~a~GDGSLrl~d~~~~-s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~S  139 (311)
T KOG0277|consen   62 GLFDVAWSENHEN-QVIAASGDGSLRLFDLTMP-SKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNS  139 (311)
T ss_pred             ceeEeeecCCCcc-eEEEEecCceEEEeccCCC-CcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcc
Confidence            4567888887754 4555599999999996543 468899999999999999998 5667888899999999999876  


Q ss_pred             ---cc---ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeecCCCcceec
Q psy7062          90 ---FI---QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNSCYPAAVVA  134 (148)
Q Consensus        90 ---~~---~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~  134 (148)
                         |.   ..|...+|+| .+..+++++.|+      .+++||++.+.....
T Consensus       140 v~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~------~l~lwdvr~~gk~~~  185 (311)
T KOG0277|consen  140 VQTFNGHNSCIYQAAFSPHIPNLFASASGDG------TLRLWDVRSPGKFMS  185 (311)
T ss_pred             eEeecCCccEEEEEecCCCCCCeEEEccCCc------eEEEEEecCCCceeE
Confidence               44   7789999999 678999999988      999999998765444

>PTZ00421 coronin; Provisional

Probab=99.70  E-value=1.6e-15  Score=114.05  Aligned_cols=112  Identities=13%  Similarity=0.142  Sum_probs=90.0

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----   89 (148)
                      .+++|+|.. +++|++++.|++|++||++++  +.+..+.+|...|.+++|+|+|..+++++.|+++++||++++     
T Consensus       129 ~~l~f~P~~-~~iLaSgs~DgtVrIWDl~tg--~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~t  205 (493)
T PTZ00421        129 GIVSFHPSA-MNVLASAGADMVVNVWDVERG--KAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSS  205 (493)
T ss_pred             EEEEeCcCC-CCEEEEEeCCCEEEEEECCCC--eEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEE
Confidence            567788763 468999999999999999988  778888899999999999999999999999999999999987     


Q ss_pred             cc----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          90 FI----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        90 ~~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                      +.    .....+.|.+++..+++++.++  .....|++||+++...
T Consensus       206 l~~H~~~~~~~~~w~~~~~~ivt~G~s~--s~Dr~VklWDlr~~~~  249 (493)
T PTZ00421        206 VEAHASAKSQRCLWAKRKDLIITLGCSK--SQQRQIMLWDTRKMAS  249 (493)
T ss_pred             EecCCCCcceEEEEcCCCCeEEEEecCC--CCCCeEEEEeCCCCCC
Confidence            22    2344678999887777765321  0123899999987653

>KOG0282|consensus

Probab=99.70  E-value=1.8e-17  Score=119.59  Aligned_cols=118  Identities=12%  Similarity=0.184  Sum_probs=101.7

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----   89 (148)
                      .++-|.|.. +.+|++++.|+.|++|++-.. .+.++++.+|...|..++|+++|.-+++++.|+.+++||.+++     
T Consensus       218 sai~~fp~~-~hLlLS~gmD~~vklW~vy~~-~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~~~~  295 (503)
T KOG0282|consen  218 SAIQWFPKK-GHLLLSGGMDGLVKLWNVYDD-RRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQVLSR  295 (503)
T ss_pred             chhhhccce-eeEEEecCCCceEEEEEEecC-cceehhhhcchhhhhhhhccccCCeeeeeecceeeeeeccccceEEEE
Confidence            455556633 899999999999999999872 3899999999999999999999999999999999999999999     


Q ss_pred             cc--ccceEEEEccCC-CEEEEEecCCceecCeeEEEeecCCCcceeccCcccC
Q psy7062          90 FI--QQVNALRITPDK-QLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTLVK  140 (148)
Q Consensus        90 ~~--~~i~~~~~sp~~-~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~~~~  140 (148)
                      |.  ..+.|+.|+|++ +.+++|+.|+      +|+-||+++++.++.+...+.
T Consensus       296 f~~~~~~~cvkf~pd~~n~fl~G~sd~------ki~~wDiRs~kvvqeYd~hLg  343 (503)
T KOG0282|consen  296 FHLDKVPTCVKFHPDNQNIFLVGGSDK------KIRQWDIRSGKVVQEYDRHLG  343 (503)
T ss_pred             EecCCCceeeecCCCCCcEEEEecCCC------cEEEEeccchHHHHHHHhhhh
Confidence            44  778999999988 6888888888      999999999887766655444

>KOG0275|consensus

Probab=99.69  E-value=4.4e-17  Score=113.48  Aligned_cols=107  Identities=21%  Similarity=0.244  Sum_probs=96.8

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEec-CCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCE-GVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~-~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---   89 (148)
                      ..|..|+.+  .++|++|+.||.|++|.++++  .+++.|. +|+..|+++.||.|+..+++++.|.++++.-++++   
T Consensus       266 Vlci~FSRD--sEMlAsGsqDGkIKvWri~tG--~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~L  341 (508)
T KOG0275|consen  266 VLCISFSRD--SEMLASGSQDGKIKVWRIETG--QCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCL  341 (508)
T ss_pred             eEEEeeccc--HHHhhccCcCCcEEEEEEecc--hHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhH
Confidence            456666666  899999999999999999999  8998887 89999999999999999999999999999999998   


Q ss_pred             --cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 --FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 --~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                        |.   +.++...|+++|..+++++.||      +|++|+..+..
T Consensus       342 KEfrGHsSyvn~a~ft~dG~~iisaSsDg------tvkvW~~Ktte  381 (508)
T KOG0275|consen  342 KEFRGHSSYVNEATFTDDGHHIISASSDG------TVKVWHGKTTE  381 (508)
T ss_pred             HHhcCccccccceEEcCCCCeEEEecCCc------cEEEecCcchh
Confidence              33   7799999999999999999999      99999976544

>KOG0316|consensus

Probab=99.68  E-value=1.2e-15  Score=102.19  Aligned_cols=107  Identities=17%  Similarity=0.289  Sum_probs=98.2

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..++.|.-+  |++.++++.|.++++|+...+  ..+.++.+|...|..++.+.|...+++|+.|..+.+||..++    
T Consensus        20 V~avryN~d--GnY~ltcGsdrtvrLWNp~rg--~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGkv~R   95 (307)
T KOG0316|consen   20 VRAVRYNVD--GNYCLTCGSDRTVRLWNPLRG--ALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGKVDR   95 (307)
T ss_pred             eEEEEEccC--CCEEEEcCCCceEEeeccccc--ceeeeecCCCceeeeccccccccccccCCCCceEEEEEcccCeeee
Confidence            356667776  999999999999999999988  899999999999999999999999999999999999999998    


Q ss_pred             -cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 -FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 -~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                       |.   +.++.++|+.+...+++|+.|.      ++++||.++..
T Consensus        96 r~rgH~aqVNtV~fNeesSVv~SgsfD~------s~r~wDCRS~s  134 (307)
T KOG0316|consen   96 RFRGHLAQVNTVRFNEESSVVASGSFDS------SVRLWDCRSRS  134 (307)
T ss_pred             ecccccceeeEEEecCcceEEEeccccc------eeEEEEcccCC
Confidence             44   8899999999999999999988      99999988653

>KOG0316|consensus

Probab=99.68  E-value=9.3e-16  Score=102.64  Aligned_cols=122  Identities=14%  Similarity=0.162  Sum_probs=99.9

Q ss_pred             eeeecCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECC
Q psy7062           8 ILTAFGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLS   87 (148)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~   87 (148)
                      -..-+++.....+...++..+++|+.|..+.+||++++  +.++.+.+|...|+.+.|+-+...+++|+.|..+++||.+
T Consensus        54 tYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TG--kv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCR  131 (307)
T KOG0316|consen   54 TYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTG--KVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCR  131 (307)
T ss_pred             eecCCCceeeeccccccccccccCCCCceEEEEEcccC--eeeeecccccceeeEEEecCcceEEEeccccceeEEEEcc
Confidence            34566777777776666888999999999999999999  9999999999999999999999999999999999999998


Q ss_pred             cc-------c-----------------------------------------cccceEEEEccCCCEEEEEecCCceecCe
Q psy7062          88 LC-------F-----------------------------------------IQQVNALRITPDKQLLASAEELSCCYCGA  119 (148)
Q Consensus        88 ~~-------~-----------------------------------------~~~i~~~~~sp~~~~l~~~~~d~~~~~~~  119 (148)
                      +.       |                                         ..+|+++.|+++++..+.++-|+      
T Consensus       132 S~s~ePiQildea~D~V~Si~v~~heIvaGS~DGtvRtydiR~G~l~sDy~g~pit~vs~s~d~nc~La~~l~s------  205 (307)
T KOG0316|consen  132 SRSFEPIQILDEAKDGVSSIDVAEHEIVAGSVDGTVRTYDIRKGTLSSDYFGHPITSVSFSKDGNCSLASSLDS------  205 (307)
T ss_pred             cCCCCccchhhhhcCceeEEEecccEEEeeccCCcEEEEEeecceeehhhcCCcceeEEecCCCCEEEEeeccc------
Confidence            76       0                                         06777788888887777777766      


Q ss_pred             eEEEeecCCCcceeccCc
Q psy7062         120 AVFVYNSCYPAAVVASNT  137 (148)
Q Consensus       120 ~i~~~d~~~~~~~~~~~~  137 (148)
                      ++++.|-.+.+....+.+
T Consensus       206 tlrLlDk~tGklL~sYkG  223 (307)
T KOG0316|consen  206 TLRLLDKETGKLLKSYKG  223 (307)
T ss_pred             eeeecccchhHHHHHhcc
Confidence            777777666555444433

>KOG0647|consensus

Probab=99.67  E-value=1.3e-15  Score=104.88  Aligned_cols=112  Identities=20%  Similarity=0.306  Sum_probs=92.7

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCce-EEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPV-INCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~-~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---   89 (148)
                      ...++|+|. ...+++.+|-|++||+|+++... ..+ .....|.+.+.+++|+.||..+++++.|+.+++||+.++   
T Consensus        30 IS~l~FSP~-~~~~~~A~SWD~tVR~wevq~~g-~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~Q~~  107 (347)
T KOG0647|consen   30 ISALAFSPQ-ADNLLAAGSWDGTVRIWEVQNSG-QLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASGQVS  107 (347)
T ss_pred             hheeEeccc-cCceEEecccCCceEEEEEecCC-cccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCCCee
Confidence            568899993 36778788999999999998731 222 334468999999999999999999999999999999988   


Q ss_pred             -cc---ccceEEEEccCC--CEEEEEecCCceecCeeEEEeecCCCccee
Q psy7062          90 -FI---QQVNALRITPDK--QLLASAEELSCCYCGAAVFVYNSCYPAAVV  133 (148)
Q Consensus        90 -~~---~~i~~~~~sp~~--~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~  133 (148)
                       +.   .++..+.|-+..  +.|++|+.|.      +|++||.+.+.++.
T Consensus       108 ~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDK------TlKfWD~R~~~pv~  151 (347)
T KOG0647|consen  108 QVAAHDAPVKTCHWVPGMNYQCLVTGSWDK------TLKFWDTRSSNPVA  151 (347)
T ss_pred             eeeecccceeEEEEecCCCcceeEeccccc------ceeecccCCCCeee
Confidence             22   889999998754  4899999988      99999999776654

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.67  E-value=4.8e-15  Score=117.48  Aligned_cols=107  Identities=15%  Similarity=0.258  Sum_probs=92.4

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEECCcc----
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..++|++.. +.+|++++.|++|++||+.++  +.+..+.+|...|.+++|+| ++..+++++.|+++++||+++.    
T Consensus       536 ~~l~~~~~~-~~~las~~~Dg~v~lWd~~~~--~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~  612 (793)
T PLN00181        536 SGICWNSYI-KSQVASSNFEGVVQVWDVARS--QLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIG  612 (793)
T ss_pred             eeEEeccCC-CCEEEEEeCCCeEEEEECCCC--eEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEE
Confidence            456666543 678999999999999999987  78888899999999999997 7899999999999999999876    


Q ss_pred             -cc--ccceEEEEc-cCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 -FI--QQVNALRIT-PDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 -~~--~~i~~~~~s-p~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                       +.  ..+.++.|+ +++..|++|+.|+      .|++||+++..
T Consensus       613 ~~~~~~~v~~v~~~~~~g~~latgs~dg------~I~iwD~~~~~  651 (793)
T PLN00181        613 TIKTKANICCVQFPSESGRSLAFGSADH------KVYYYDLRNPK  651 (793)
T ss_pred             EEecCCCeEEEEEeCCCCCEEEEEeCCC------eEEEEECCCCC
Confidence             22  678899996 4799999999988      99999998654

>KOG0264|consensus

Probab=99.67  E-value=9e-16  Score=109.90  Aligned_cols=111  Identities=21%  Similarity=0.314  Sum_probs=93.0

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEECCcc---
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d~~~~---   89 (148)
                      .+.++|++.+ ..+++++++|+.+.+||.++...++.....+|+..+.+++|+| ++..|++|+.|+++.|||+|+.   
T Consensus       230 VeDV~~h~~h-~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~  308 (422)
T KOG0264|consen  230 VEDVAWHPLH-EDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKP  308 (422)
T ss_pred             eehhhccccc-hhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccC
Confidence            4567777765 6788888999999999999532366777889999999999999 5668899999999999999987   


Q ss_pred             ---cc---ccceEEEEccC-CCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          90 ---FI---QQVNALRITPD-KQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        90 ---~~---~~i~~~~~sp~-~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                         |.   ..+.++.|+|+ ...|++++.|+      ++.+||+..-..
T Consensus       309 lh~~e~H~dev~~V~WSPh~etvLASSg~D~------rl~vWDls~ig~  351 (422)
T KOG0264|consen  309 LHTFEGHEDEVFQVEWSPHNETVLASSGTDR------RLNVWDLSRIGE  351 (422)
T ss_pred             ceeccCCCcceEEEEeCCCCCceeEecccCC------cEEEEecccccc
Confidence               33   88999999995 56888999988      999999875443

>KOG0640|consensus

Probab=99.67  E-value=1.3e-15  Score=105.53  Aligned_cols=110  Identities=15%  Similarity=0.262  Sum_probs=95.0

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCC----------------CCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGS----------------NNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED   78 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~----------------~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~   78 (148)
                      .+.+|+++  |.++++|+.|-+|+++|++.                .....++++..|...|+.+.|+|....|+++++|
T Consensus       116 R~aafs~D--G~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~ILiS~srD  193 (430)
T KOG0640|consen  116 RAAAFSPD--GSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRETILISGSRD  193 (430)
T ss_pred             eeeeeCCC--CcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhheEEeccCC
Confidence            46677787  99999999999999999971                1124578888999999999999999999999999


Q ss_pred             CcEEEEECCcc--------cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062          79 CRARIWDLSLC--------FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV  132 (148)
Q Consensus        79 ~~i~l~d~~~~--------~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~  132 (148)
                      +++++||+...        |+  .+++++.|+|.|.+|+.|....      .+++||+.+.+..
T Consensus       194 ~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp------~~rlYdv~T~Qcf  251 (430)
T KOG0640|consen  194 NTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHP------TLRLYDVNTYQCF  251 (430)
T ss_pred             CeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCC------ceeEEeccceeEe
Confidence            99999999765        33  8899999999999999999855      8999999876643

>KOG0772|consensus

Probab=99.67  E-value=2.7e-16  Score=114.74  Aligned_cols=112  Identities=16%  Similarity=0.202  Sum_probs=89.6

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEec-----CCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCc
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCE-----GVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSL   88 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~-----~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~   88 (148)
                      ..+.+|+|... +.+.+++.|+++++||++..+ +.+..+.     +-.-.++.++|+|||++++.|+.||.|.+||..+
T Consensus       271 lt~g~whP~~k-~~FlT~s~DgtlRiWdv~~~k-~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~  348 (641)
T KOG0772|consen  271 LTCGCWHPDNK-EEFLTCSYDGTLRIWDVNNTK-SQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGS  348 (641)
T ss_pred             eeccccccCcc-cceEEecCCCcEEEEecCCch-hheeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeeeecCC
Confidence            35778888864 555666999999999998762 3333332     1234578889999999999999999999999866


Q ss_pred             c-------cc------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCccee
Q psy7062          89 C-------FI------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVV  133 (148)
Q Consensus        89 ~-------~~------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~  133 (148)
                      .       +.      ..|.|+.||++|++|++-+.|+      ++++||+++...+.
T Consensus       349 ~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~------tLKvWDLrq~kkpL  400 (641)
T KOG0772|consen  349 RTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDD------TLKVWDLRQFKKPL  400 (641)
T ss_pred             cccccceEeeeccCCCCceeEEEeccccchhhhccCCC------ceeeeeccccccch
Confidence            5       11      5899999999999999999988      99999999876543

>KOG0645|consensus

Probab=99.66  E-value=8.9e-15  Score=99.46  Aligned_cols=119  Identities=16%  Similarity=0.239  Sum_probs=94.2

Q ss_pred             ccceeeecCcE----EEEEeCCCCccEEEEEecCCeEEEEeCCCCCC-CceEEe-cCCCCCEEEEEEccCCCEEEEEeCC
Q psy7062           5 LGGILTAFGQI----STVFDSKHLVEMVAALGGYQHIRMYDFGSNNP-NPVINC-EGVSKNVVEVGFQEDGKWMFTGGED   78 (148)
Q Consensus         5 ~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~-~~~~~~-~~~~~~i~~~~~sp~~~~l~~~~~~   78 (148)
                      |..+.+..++.    .++|+|-. |.+|++++.|+.|++|+...+.. .....+ .+|+..|..++|+|.|++|++++.|
T Consensus         4 l~~~~~~~gh~~r~W~~awhp~~-g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD   82 (312)
T KOG0645|consen    4 LILEQKLSGHKDRVWSVAWHPGK-GVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFD   82 (312)
T ss_pred             ceeEEeecCCCCcEEEEEeccCC-ceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeecc
Confidence            44455555554    46666643 67999999999999999985411 222222 3689999999999999999999999


Q ss_pred             CcEEEEECCcc-c------c---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          79 CRARIWDLSLC-F------I---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        79 ~~i~l~d~~~~-~------~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                      .++-+|.=..+ |      +   ..+.+++|+++|.+|+++++|.      .|-+|.+....
T Consensus        83 ~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDK------SVWiWe~dedd  138 (312)
T KOG0645|consen   83 ATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDK------SVWIWEIDEDD  138 (312)
T ss_pred             ceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCC------eEEEEEecCCC
Confidence            99999987766 3      3   8899999999999999999988      99999887443

>KOG0645|consensus

Probab=99.66  E-value=5.7e-15  Score=100.38  Aligned_cols=106  Identities=19%  Similarity=0.231  Sum_probs=95.4

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ...+||.|.  |++|++|+-|.++.+|.-..+.-+.+..+++|...|.+++|+++|++|+++++|..+.+|.+...    
T Consensus        64 VRsvAwsp~--g~~La~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfe  141 (312)
T KOG0645|consen   64 VRSVAWSPH--GRYLASASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFE  141 (312)
T ss_pred             eeeeeecCC--CcEEEEeeccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEE
Confidence            467888888  89999999999999998876655788999999999999999999999999999999999999854    


Q ss_pred             ----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          90 ----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        90 ----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                          ++   +.+..+.|||....|++++-|.      +|++|+-.
T Consensus       142 c~aVL~~HtqDVK~V~WHPt~dlL~S~SYDn------TIk~~~~~  180 (312)
T KOG0645|consen  142 CIAVLQEHTQDVKHVIWHPTEDLLFSCSYDN------TIKVYRDE  180 (312)
T ss_pred             EEeeeccccccccEEEEcCCcceeEEeccCC------eEEEEeec
Confidence                33   7788999999999999999988      99999866

>KOG0640|consensus

Probab=99.66  E-value=2.2e-15  Score=104.44  Aligned_cols=120  Identities=14%  Similarity=0.174  Sum_probs=101.7

Q ss_pred             ceeeecCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEe---cCCCCCEEEEEEccCCCEEEEEeCCCcEEE
Q psy7062           7 GILTAFGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINC---EGVSKNVVEVGFQEDGKWMFTGGEDCRARI   83 (148)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~---~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l   83 (148)
                      -+...+...++.|+|.  |++|++|.+..++++||+++.  +.....   ..|+..|+++.+++.|++.++++.||.|++
T Consensus       212 ~~qd~~~vrsiSfHPs--GefllvgTdHp~~rlYdv~T~--QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~Ikl  287 (430)
T KOG0640|consen  212 VFQDTEPVRSISFHPS--GEFLLVGTDHPTLRLYDVNTY--QCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKL  287 (430)
T ss_pred             HhhccceeeeEeecCC--CceEEEecCCCceeEEeccce--eEeeecCcccccccceeEEEecCCccEEEEeccCCcEEe
Confidence            3344555678888888  999999888889999999987  544322   358999999999999999999999999999


Q ss_pred             EECCcc-----cc-----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062          84 WDLSLC-----FI-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN  136 (148)
Q Consensus        84 ~d~~~~-----~~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~  136 (148)
                      ||--+.     +.     ..|++..|+.+++++++.+.|.      .+++|.+.+...+..+.
T Consensus       288 wDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS------~vkLWEi~t~R~l~~Yt  344 (430)
T KOG0640|consen  288 WDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDS------TVKLWEISTGRMLKEYT  344 (430)
T ss_pred             eccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcc------eeeeeeecCCceEEEEe
Confidence            998776     33     7799999999999999999988      99999999988777664

>KOG0285|consensus

Probab=99.66  E-value=1.2e-15  Score=107.18  Aligned_cols=108  Identities=15%  Similarity=0.264  Sum_probs=97.1

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----   89 (148)
                      ..++++..  ..++.++++|+.|+.||++..  +.++.+.+|-+.|.+++..|.-..+++++.|.++++||+++.     
T Consensus       197 r~vavS~r--HpYlFs~gedk~VKCwDLe~n--kvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~  272 (460)
T KOG0285|consen  197 RGVAVSKR--HPYLFSAGEDKQVKCWDLEYN--KVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHV  272 (460)
T ss_pred             eeeeeccc--CceEEEecCCCeeEEEechhh--hhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEE
Confidence            56777777  679999999999999999998  899999999999999999999999999999999999999988     


Q ss_pred             cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062          90 FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV  132 (148)
Q Consensus        90 ~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~  132 (148)
                      +.   ..+..+.+.|-..++++++.|+      +|++||++..+..
T Consensus       273 l~GH~~~V~~V~~~~~dpqvit~S~D~------tvrlWDl~agkt~  312 (460)
T KOG0285|consen  273 LSGHTNPVASVMCQPTDPQVITGSHDS------TVRLWDLRAGKTM  312 (460)
T ss_pred             ecCCCCcceeEEeecCCCceEEecCCc------eEEEeeeccCcee
Confidence            33   7899999999777899999988      9999999876543

>KOG0295|consensus

Probab=99.65  E-value=3e-15  Score=105.16  Aligned_cols=94  Identities=18%  Similarity=0.310  Sum_probs=87.0

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc---ccceE
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI---QQVNA   96 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~---~~i~~   96 (148)
                      ++++++++.|++|++||+.++  ..+.++.+|..+|.+++|+|.|++++++..|+++++||+++.     +.   .-+.+
T Consensus       304 ~~~l~s~SrDktIk~wdv~tg--~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~  381 (406)
T KOG0295|consen  304 GQVLGSGSRDKTIKIWDVSTG--MCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFVTS  381 (406)
T ss_pred             ccEEEeecccceEEEEeccCC--eEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCCCcceeEE
Confidence            479999999999999999999  999999999999999999999999999999999999999988     22   77889


Q ss_pred             EEEccCCCEEEEEecCCceecCeeEEEeec
Q psy7062          97 LRITPDKQLLASAEELSCCYCGAAVFVYNS  126 (148)
Q Consensus        97 ~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~  126 (148)
                      +.|+.+..++++|+-|.      ++++|..
T Consensus       382 lDfh~~~p~VvTGsVdq------t~KvwEc  405 (406)
T KOG0295|consen  382 LDFHKTAPYVVTGSVDQ------TVKVWEC  405 (406)
T ss_pred             EecCCCCceEEeccccc------eeeeeec
Confidence            99999999999999977      8999865

>KOG0273|consensus

Probab=99.65  E-value=4e-15  Score=107.47  Aligned_cols=113  Identities=19%  Similarity=0.326  Sum_probs=97.4

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---   89 (148)
                      +..+++|+.+  |.+||+|+.+|.+++|+....   .+.++..|...|.+++|+.+|.++++++.|+++.+||..++   
T Consensus       237 dVT~L~Wn~~--G~~LatG~~~G~~riw~~~G~---l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~  311 (524)
T KOG0273|consen  237 DVTSLDWNND--GTLLATGSEDGEARIWNKDGN---LISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVK  311 (524)
T ss_pred             CcceEEecCC--CCeEEEeecCcEEEEEecCch---hhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEE
Confidence            3466777666  999999999999999999864   78888889999999999999999999999999999999665   


Q ss_pred             -------------------------------------------cc---ccceEEEEccCCCEEEEEecCCceecCeeEEE
Q psy7062          90 -------------------------------------------FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFV  123 (148)
Q Consensus        90 -------------------------------------------~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~  123 (148)
                                                                 |.   +.|.++.|.|.+.+|++++.|+      ++++
T Consensus       312 q~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~------Tlki  385 (524)
T KOG0273|consen  312 QQFEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDG------TLKI  385 (524)
T ss_pred             EeeeeccCCccceEEecCceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCC------eeEe
Confidence                                                       11   7899999999999999999999      9999


Q ss_pred             eecCCCcceeccC
Q psy7062         124 YNSCYPAAVVASN  136 (148)
Q Consensus       124 ~d~~~~~~~~~~~  136 (148)
                      |+.........+.
T Consensus       386 Ws~~~~~~~~~l~  398 (524)
T KOG0273|consen  386 WSMGQSNSVHDLQ  398 (524)
T ss_pred             eecCCCcchhhhh
Confidence            9976555544443

>KOG0318|consensus

Probab=99.65  E-value=7.3e-15  Score=107.43  Aligned_cols=118  Identities=15%  Similarity=0.289  Sum_probs=99.7

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..++|.+|+  +..+++|+.|+.+++|.+.............|...|+.+++|||+.+|++++-.+.+.+||..+.    
T Consensus       446 ~s~vAv~~~--~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~~~  523 (603)
T KOG0318|consen  446 SSAVAVSPD--GSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREVKT  523 (603)
T ss_pred             cceEEEcCC--CCEEEEecccceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCceec
Confidence            467888888  89999999999999999987522334455679999999999999999999999999999999887    


Q ss_pred             ----cc-ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccCccc
Q psy7062          90 ----FI-QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTLV  139 (148)
Q Consensus        90 ----~~-~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~~~  139 (148)
                          |. .+|.+++|+|+...+++|+-|-      .|.+|++..|.........+
T Consensus       524 ~~w~FHtakI~~~aWsP~n~~vATGSlDt------~Viiysv~kP~~~i~iknAH  572 (603)
T KOG0318|consen  524 NRWAFHTAKINCVAWSPNNKLVATGSLDT------NVIIYSVKKPAKHIIIKNAH  572 (603)
T ss_pred             ceeeeeeeeEEEEEeCCCceEEEeccccc------eEEEEEccChhhheEecccc
Confidence                33 9999999999999999999877      89999999876544443333

>KOG1273|consensus

Probab=99.65  E-value=3.2e-15  Score=103.69  Aligned_cols=98  Identities=18%  Similarity=0.226  Sum_probs=85.1

Q ss_pred             cccceeeecCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEE
Q psy7062           4 ALGGILTAFGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARI   83 (148)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l   83 (148)
                      +|.+-+......++.|++-  |.+||+|+.+|.+.+||+.+.  ..-+.+.+|...|++++||++|+.|++++.|..+.+
T Consensus        16 el~~tld~~~a~~~~Fs~~--G~~lAvGc~nG~vvI~D~~T~--~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~l   91 (405)
T KOG1273|consen   16 ELTHTLDNPLAECCQFSRW--GDYLAVGCANGRVVIYDFDTF--RIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKL   91 (405)
T ss_pred             hhceeccCCccceEEeccC--cceeeeeccCCcEEEEEcccc--chhhhhhccccceeEEEecCCCCEeeeecCCceeEE
Confidence            4455555555678888877  999999999999999999998  777889999999999999999999999999999999


Q ss_pred             EECCcc-------ccccceEEEEccCCCE
Q psy7062          84 WDLSLC-------FIQQVNALRITPDKQL  105 (148)
Q Consensus        84 ~d~~~~-------~~~~i~~~~~sp~~~~  105 (148)
                      ||+..+       |.++++...|+|..+.
T Consensus        92 wDl~~gs~l~rirf~spv~~~q~hp~k~n  120 (405)
T KOG1273|consen   92 WDLLKGSPLKRIRFDSPVWGAQWHPRKRN  120 (405)
T ss_pred             EeccCCCceeEEEccCccceeeeccccCC
Confidence            999988       3399999999995543

>KOG0318|consensus

Probab=99.64  E-value=1.6e-14  Score=105.72  Aligned_cols=109  Identities=18%  Similarity=0.246  Sum_probs=97.8

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEec---CCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCE---GVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~---~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--   89 (148)
                      .++.|+|+  |.++++++.|+++.+||=+++  +.+..+.   +|.+.|.+++|+||+..+++++-|.++++||+.+.  
T Consensus       194 ~~VRysPD--G~~Fat~gsDgki~iyDGktg--e~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~sl  269 (603)
T KOG0318|consen  194 NCVRYSPD--GSRFATAGSDGKIYIYDGKTG--EKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSL  269 (603)
T ss_pred             eeEEECCC--CCeEEEecCCccEEEEcCCCc--cEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccce
Confidence            67888898  999999999999999999999  8888887   79999999999999999999999999999999765  


Q ss_pred             -----------------------------------cc--------------ccceEEEEccCCCEEEEEecCCceecCee
Q psy7062          90 -----------------------------------FI--------------QQVNALRITPDKQLLASAEELSCCYCGAA  120 (148)
Q Consensus        90 -----------------------------------~~--------------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~  120 (148)
                                                         |.              ..|.++..+|++.+|++++.||      .
T Consensus       270 v~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG------~  343 (603)
T KOG0318|consen  270 VSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDG------H  343 (603)
T ss_pred             EEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCc------e
Confidence                                               00              6789999999999999999999      9


Q ss_pred             EEEeecCCCccee
Q psy7062         121 VFVYNSCYPAAVV  133 (148)
Q Consensus       121 i~~~d~~~~~~~~  133 (148)
                      |.-||......-.
T Consensus       344 I~~W~~~~g~~~~  356 (603)
T KOG0318|consen  344 INSWDSGSGTSDR  356 (603)
T ss_pred             EEEEecCCccccc
Confidence            9999988665443

>KOG0283|consensus

Probab=99.64  E-value=1.2e-15  Score=115.97  Aligned_cols=106  Identities=15%  Similarity=0.317  Sum_probs=89.1

Q ss_pred             EEEEeCCCCccEEEEEecCCeEEEEeCCC--------------------------------CC-----------------
Q psy7062          16 STVFDSKHLVEMVAALGGYQHIRMYDFGS--------------------------------NN-----------------   46 (148)
Q Consensus        16 ~~~~~~~~~~~~l~~~~~d~~v~~~d~~~--------------------------------~~-----------------   46 (148)
                      +..|+++  |.|||+|+.|+.|+||.+..                                ..                 
T Consensus       272 ~mKFS~D--GKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~~s~~~~  349 (712)
T KOG0283|consen  272 AMKFSHD--GKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGSQSPCVL  349 (712)
T ss_pred             EEEeCCC--CceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccccccccCCcccc
Confidence            4555666  99999999999999998866                                00                 


Q ss_pred             ---------CCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc--ccceEEEEcc-CCCEEEEE
Q psy7062          47 ---------PNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI--QQVNALRITP-DKQLLASA  109 (148)
Q Consensus        47 ---------~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~--~~i~~~~~sp-~~~~l~~~  109 (148)
                               .+++..+.+|...|..++||.+ .+|++++.|.+++||++...     |.  ..++|++|+| |.+++++|
T Consensus       350 ~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn-~fLLSSSMDKTVRLWh~~~~~CL~~F~HndfVTcVaFnPvDDryFiSG  428 (712)
T KOG0283|consen  350 LPLKAFVFSEKPFCEFKGHTADILDLSWSKN-NFLLSSSMDKTVRLWHPGRKECLKVFSHNDFVTCVAFNPVDDRYFISG  428 (712)
T ss_pred             CCCccccccccchhhhhccchhheecccccC-CeeEeccccccEEeecCCCcceeeEEecCCeeEEEEecccCCCcEeec
Confidence                     1345567889999999999874 56889999999999999876     54  8899999999 89999999


Q ss_pred             ecCCceecCeeEEEeecCCCc
Q psy7062         110 EELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus       110 ~~d~~~~~~~~i~~~d~~~~~  130 (148)
                      +-|+      ++++|++..-+
T Consensus       429 SLD~------KvRiWsI~d~~  443 (712)
T KOG0283|consen  429 SLDG------KVRLWSISDKK  443 (712)
T ss_pred             cccc------ceEEeecCcCe
Confidence            9999      99999987544

>KOG0289|consensus

Probab=99.63  E-value=1.1e-14  Score=104.35  Aligned_cols=111  Identities=19%  Similarity=0.197  Sum_probs=93.2

Q ss_pred             EEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecC--CCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          16 STVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEG--VSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        16 ~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~--~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ....+....|+||+++++|++.-..|++++  ..+.....  ..-.+++..|+|||..+.+|..|+.+++||+.++    
T Consensus       306 V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g--~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a  383 (506)
T KOG0289|consen  306 VTGLSLHPTGEYLLSASNDGTWAFSDISSG--SQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVA  383 (506)
T ss_pred             ceeeeeccCCcEEEEecCCceEEEEEccCC--cEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCccccc
Confidence            333343444999999999999999999998  66665543  2245899999999999999999999999999988    


Q ss_pred             -cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceec
Q psy7062          90 -FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVA  134 (148)
Q Consensus        90 -~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~  134 (148)
                       |.   ++|..++|+.+|-+|++++.|+      .|++||+|.......
T Consensus       384 ~Fpght~~vk~i~FsENGY~Lat~add~------~V~lwDLRKl~n~kt  426 (506)
T KOG0289|consen  384 KFPGHTGPVKAISFSENGYWLATAADDG------SVKLWDLRKLKNFKT  426 (506)
T ss_pred             cCCCCCCceeEEEeccCceEEEEEecCC------eEEEEEehhhcccce
Confidence             55   9999999999999999999988      899999997765443

>KOG0296|consensus

Probab=99.63  E-value=1.7e-14  Score=101.40  Aligned_cols=109  Identities=17%  Similarity=0.226  Sum_probs=95.4

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----   89 (148)
                      ..++.+.+++.+++++|+.|..-.+|++.++  +....+.+|+..|+++.|+.+|.++++|+.+|.+++|+..++     
T Consensus        66 svFavsl~P~~~l~aTGGgDD~AflW~~~~g--e~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~  143 (399)
T KOG0296|consen   66 SVFAVSLHPNNNLVATGGGDDLAFLWDISTG--EFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWK  143 (399)
T ss_pred             ceEEEEeCCCCceEEecCCCceEEEEEccCC--cceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEE
Confidence            3333333335899999999999999999999  888999999999999999999999999999999999999888     


Q ss_pred             c--c-ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          90 F--I-QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        90 ~--~-~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                      +  . ..+-.+.|||.++.|+.|+.||      .+..|.+.+...
T Consensus       144 ~~~e~~dieWl~WHp~a~illAG~~DG------svWmw~ip~~~~  182 (399)
T KOG0296|consen  144 LDQEVEDIEWLKWHPRAHILLAGSTDG------SVWMWQIPSQAL  182 (399)
T ss_pred             eecccCceEEEEecccccEEEeecCCC------cEEEEECCCcce
Confidence            2  2 7788899999999999999999      899999987433

>KOG0289|consensus

Probab=99.63  E-value=8.1e-15  Score=105.09  Aligned_cols=102  Identities=23%  Similarity=0.399  Sum_probs=90.4

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--cc
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--FI   91 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--~~   91 (148)
                      ..+.+|+|+  |.+|.+|..|+.+++||++++  ..+..|.+|++.|..++|+-+|-|+++++.|+.+++||++..  |+
T Consensus       350 ~ts~~fHpD--gLifgtgt~d~~vkiwdlks~--~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~k  425 (506)
T KOG0289|consen  350 YTSAAFHPD--GLIFGTGTPDGVVKIWDLKSQ--TNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFK  425 (506)
T ss_pred             eEEeeEcCC--ceEEeccCCCceEEEEEcCCc--cccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccc
Confidence            467888998  999999999999999999998  788999999999999999999999999999999999999987  22


Q ss_pred             -------ccceEEEEccCCCEEEEEecCCceecCeeEEEee
Q psy7062          92 -------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYN  125 (148)
Q Consensus        92 -------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d  125 (148)
                             ..+..+.|.+.|++|+.++.+-      +|++++
T Consensus       426 t~~l~~~~~v~s~~fD~SGt~L~~~g~~l------~Vy~~~  460 (506)
T KOG0289|consen  426 TIQLDEKKEVNSLSFDQSGTYLGIAGSDL------QVYICK  460 (506)
T ss_pred             eeeccccccceeEEEcCCCCeEEeeccee------EEEEEe
Confidence                   5699999999999999997733      555555

>KOG0276|consensus

Probab=99.63  E-value=6.6e-15  Score=109.68  Aligned_cols=108  Identities=21%  Similarity=0.394  Sum_probs=95.5

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCC--CEEEEEeCCCcEEEEECCcc---
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDG--KWMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~--~~l~~~~~~~~i~l~d~~~~---   89 (148)
                      ..++|.|.. .+.+|++|-|++|++|.+.++  .+..++++|...|.++++-+.|  -++++|+.|.++++||.++.   
T Consensus       144 Mqv~fnPkD-~ntFaS~sLDrTVKVWslgs~--~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV  220 (794)
T KOG0276|consen  144 MQVAFNPKD-PNTFASASLDRTVKVWSLGSP--HPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCV  220 (794)
T ss_pred             EEEEecCCC-ccceeeeeccccEEEEEcCCC--CCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHH
Confidence            466777864 788899999999999999988  8889999999999999998754  49999999999999999987   


Q ss_pred             --cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          90 --FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        90 --~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                        +.   +.+..+.|+|.-..+++|++||      ++++|+..+.+.
T Consensus       221 ~TLeGHt~Nvs~v~fhp~lpiiisgsEDG------TvriWhs~Ty~l  261 (794)
T KOG0276|consen  221 QTLEGHTNNVSFVFFHPELPIIISGSEDG------TVRIWNSKTYKL  261 (794)
T ss_pred             HHhhcccccceEEEecCCCcEEEEecCCc------cEEEecCcceeh
Confidence              44   8899999999999999999999      999999776544

>KOG1446|consensus

Probab=99.62  E-value=2.4e-14  Score=98.85  Aligned_cols=108  Identities=17%  Similarity=0.184  Sum_probs=89.4

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCC------------------------------------------CCceE
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNN------------------------------------------PNPVI   51 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~------------------------------------------~~~~~   51 (148)
                      ..++.|+.+  |++|+++++|.++++||..+++                                          .+.++
T Consensus        17 i~sl~fs~~--G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dNkylR   94 (311)
T KOG1446|consen   17 INSLDFSDD--GLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDNKYLR   94 (311)
T ss_pred             eeEEEecCC--CCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeecCceEE
Confidence            456666666  8888887888888888887654                                          24567


Q ss_pred             EecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc-ccceEEEEccCCCEEEEEecCCceecCeeEEEee
Q psy7062          52 NCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI-QQVNALRITPDKQLLASAEELSCCYCGAAVFVYN  125 (148)
Q Consensus        52 ~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~-~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d  125 (148)
                      .|.+|...|.+++.+|-+..+++++.|.++++||++..     +. ......+|.|+|-+++.+...+      .|++||
T Consensus        95 YF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~pi~AfDp~GLifA~~~~~~------~IkLyD  168 (311)
T KOG1446|consen   95 YFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGRPIAAFDPEGLIFALANGSE------LIKLYD  168 (311)
T ss_pred             EcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCCCcceeECCCCcEEEEecCCC------eEEEEE
Confidence            78999999999999999999999999999999999966     33 5566789999999999998754      899999


Q ss_pred             cCCC
Q psy7062         126 SCYP  129 (148)
Q Consensus       126 ~~~~  129 (148)
                      ++.-
T Consensus       169 ~Rs~  172 (311)
T KOG1446|consen  169 LRSF  172 (311)
T ss_pred             eccc
Confidence            9864

>PTZ00420 coronin; Provisional

Probab=99.62  E-value=3.9e-14  Score=107.61  Aligned_cols=111  Identities=8%  Similarity=0.048  Sum_probs=85.6

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..+++|+|.. ..+|++++.|++|++||++++  +.+..+. |...|.+++|+|+|..+++++.|+.+++||++++    
T Consensus       128 V~sVaf~P~g-~~iLaSgS~DgtIrIWDl~tg--~~~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~  203 (568)
T PTZ00420        128 ISIIDWNPMN-YYIMCSSGFDSFVNIWDIENE--KRAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIAS  203 (568)
T ss_pred             EEEEEECCCC-CeEEEEEeCCCeEEEEECCCC--cEEEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEE
Confidence            4678888872 345678899999999999987  6666665 6678999999999999999999999999999987    


Q ss_pred             -cc---cc-----ceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 -FI---QQ-----VNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 -~~---~~-----i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                       +.   +.     ++...|++++.+|++++.++.  ...+|++||++...
T Consensus       204 tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~--~~R~VkLWDlr~~~  251 (568)
T PTZ00420        204 SFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKN--NMREMKLWDLKNTT  251 (568)
T ss_pred             EEecccCCceeEEEEeeeEcCCCCEEEEEEcCCC--CccEEEEEECCCCC
Confidence             22   22     223345688899999887641  12379999999643

>KOG0772|consensus

Probab=99.61  E-value=3.2e-15  Score=109.17  Aligned_cols=118  Identities=19%  Similarity=0.338  Sum_probs=93.6

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEE-ecCCCC--CEEEEEEccCCCEEEEEeCCCcEEEEECCcc-
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVIN-CEGVSK--NVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~-~~~~~~--~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-   89 (148)
                      ...++|+++  +.++|+|+.||+|.+|+......++... -.+|..  .|+++.||+||++|++.+.|+++++||++.. 
T Consensus       320 ~tsC~~nrd--g~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~k  397 (641)
T KOG0772|consen  320 VTSCAWNRD--GKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFK  397 (641)
T ss_pred             ceeeecCCC--cchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccccc
Confidence            467888888  8999999999999999986543333333 346766  8999999999999999999999999999877 


Q ss_pred             --------cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCccee
Q psy7062          90 --------FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVV  133 (148)
Q Consensus        90 --------~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~  133 (148)
                              +.  -+-...+|||+.++|++|..-..-...+.+.+||-.+...+.
T Consensus       398 kpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~  451 (641)
T KOG0772|consen  398 KPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVY  451 (641)
T ss_pred             cchhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEE
Confidence                    21  556788999999999999764444445578999977655443

>KOG0281|consensus

Probab=99.61  E-value=3.3e-15  Score=104.92  Aligned_cols=95  Identities=15%  Similarity=0.278  Sum_probs=85.0

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc---ccceE
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI---QQVNA   96 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~---~~i~~   96 (148)
                      .+++++++.|.++++|++.+.  +.++++.+|...|-++.  ..++++++|+.|.+|++||+..+     ++   .-+.+
T Consensus       330 ~kyIVsASgDRTikvW~~st~--efvRtl~gHkRGIAClQ--Yr~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRc  405 (499)
T KOG0281|consen  330 DKYIVSASGDRTIKVWSTSTC--EFVRTLNGHKRGIACLQ--YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRC  405 (499)
T ss_pred             cceEEEecCCceEEEEeccce--eeehhhhcccccceehh--ccCeEEEecCCCceEEEEeccccHHHHHHhchHHhhhh
Confidence            569999999999999999999  99999999999997764  48999999999999999999998     34   66899


Q ss_pred             EEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          97 LRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        97 ~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                      +.|  +.+.+++|.-||      +|++||+.....
T Consensus       406 iRF--d~krIVSGaYDG------kikvWdl~aald  432 (499)
T KOG0281|consen  406 IRF--DNKRIVSGAYDG------KIKVWDLQAALD  432 (499)
T ss_pred             eee--cCceeeeccccc------eEEEEecccccC
Confidence            999  888999999999      999999876543

>KOG0292|consensus

Probab=99.61  E-value=7.5e-15  Score=113.02  Aligned_cols=107  Identities=18%  Similarity=0.288  Sum_probs=98.7

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ...++|+|.  ..++++|++|-.|++|+.++.  +++.++.+|-.-|..+.|++.--|++++|.|.+|++|++.++    
T Consensus        54 VRgv~FH~~--qplFVSGGDDykIkVWnYk~r--rclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~ia  129 (1202)
T KOG0292|consen   54 VRGVDFHPT--QPLFVSGGDDYKIKVWNYKTR--RCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIA  129 (1202)
T ss_pred             cceeeecCC--CCeEEecCCccEEEEEecccc--eehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEE
Confidence            367888888  899999999999999999998  999999999999999999999999999999999999999998    


Q ss_pred             -cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 -FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 -~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                       +.   +.+.|.+|+|....++++|-|.      +|++||+...+
T Consensus       130 vltGHnHYVMcAqFhptEDlIVSaSLDQ------TVRVWDisGLR  168 (1202)
T KOG0292|consen  130 VLTGHNHYVMCAQFHPTEDLIVSASLDQ------TVRVWDISGLR  168 (1202)
T ss_pred             EEecCceEEEeeccCCccceEEEecccc------eEEEEeecchh
Confidence             44   8899999999999999999988      99999987544

>KOG0319|consensus

Probab=99.60  E-value=2.5e-14  Score=107.96  Aligned_cols=105  Identities=15%  Similarity=0.354  Sum_probs=95.7

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      .-++.|++.  .++++++|.|.+|++|.+.+.  .++.++.+|++.|....|-.+|+.+++++.||.+++|++++.    
T Consensus       508 vw~V~Fs~~--dq~laT~SgD~TvKIW~is~f--SClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt~eC~~  583 (775)
T KOG0319|consen  508 VWCVSFSKN--DQLLATCSGDKTVKIWSISTF--SCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNECEM  583 (775)
T ss_pred             eEEEEeccc--cceeEeccCCceEEEEEeccc--eeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEeccchhhhh
Confidence            356777776  789999999999999999999  999999999999999999999999999999999999999988    


Q ss_pred             -cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062          90 -FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        90 -~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                       +.   .++|+++.+|....+++|+.|+      .|.+|.-.+
T Consensus       584 tlD~H~DrvWaL~~~~~~~~~~tgg~Dg------~i~~wkD~T  620 (775)
T KOG0319|consen  584 TLDAHNDRVWALSVSPLLDMFVTGGGDG------RIIFWKDVT  620 (775)
T ss_pred             hhhhccceeEEEeecCccceeEecCCCe------EEEEeecCc
Confidence             33   8999999999999999999988      999996443

>KOG0310|consensus

Probab=99.60  E-value=4.1e-14  Score=102.48  Aligned_cols=106  Identities=19%  Similarity=0.242  Sum_probs=90.1

Q ss_pred             EEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEECCcc-----
Q psy7062          16 STVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIWDLSLC-----   89 (148)
Q Consensus        16 ~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d~~~~-----   89 (148)
                      .+-|.+. .+.+|++|++|+.+++||+.+.  ..+..+.+|+..|.+.+++| ++.++++|+.||+|++||+++.     
T Consensus       115 ~~~f~~~-d~t~l~s~sDd~v~k~~d~s~a--~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~  191 (487)
T KOG0310|consen  115 VTKFSPQ-DNTMLVSGSDDKVVKYWDLSTA--YVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVV  191 (487)
T ss_pred             EEEeccc-CCeEEEecCCCceEEEEEcCCc--EEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeE
Confidence            4445554 4889999999999999999998  56778899999999999999 5668999999999999999986     


Q ss_pred             -cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          90 -FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        90 -~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                       +.  .++-.+.+-|.|..+++++.       +.|++||+.++..
T Consensus       192 elnhg~pVe~vl~lpsgs~iasAgG-------n~vkVWDl~~G~q  229 (487)
T KOG0310|consen  192 ELNHGCPVESVLALPSGSLIASAGG-------NSVKVWDLTTGGQ  229 (487)
T ss_pred             EecCCCceeeEEEcCCCCEEEEcCC-------CeEEEEEecCCce
Confidence             33  88999999999999999874       3599999986544

>KOG0265|consensus

Probab=99.59  E-value=3.9e-14  Score=97.53  Aligned_cols=111  Identities=14%  Similarity=0.183  Sum_probs=93.1

Q ss_pred             CCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCC-EEEEEeCCCcEEEEECCcc-----cc--c
Q psy7062          21 SKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGK-WMFTGGEDCRARIWDLSLC-----FI--Q   92 (148)
Q Consensus        21 ~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~~~~~i~l~d~~~~-----~~--~   92 (148)
                      ...++..+++++.|.+++.||++++  +.++.+++|...+..+.-+.-|. ++.+++.|+++++||+++.     ++  .
T Consensus        98 ~~~d~s~i~S~gtDk~v~~wD~~tG--~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~ky  175 (338)
T KOG0265|consen   98 GMRDGSHILSCGTDKTVRGWDAETG--KRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENKY  175 (338)
T ss_pred             eccCCCEEEEecCCceEEEEecccc--eeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccccce
Confidence            3344889999999999999999999  89999999999999998666555 6678899999999999976     43  7


Q ss_pred             cceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccCccc
Q psy7062          93 QVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTLV  139 (148)
Q Consensus        93 ~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~~~  139 (148)
                      ++.++.|..++..+.+|+=|+      .|++||++........++..
T Consensus       176 qltAv~f~d~s~qv~sggIdn------~ikvWd~r~~d~~~~lsGh~  216 (338)
T KOG0265|consen  176 QLTAVGFKDTSDQVISGGIDN------DIKVWDLRKNDGLYTLSGHA  216 (338)
T ss_pred             eEEEEEecccccceeeccccC------ceeeeccccCcceEEeeccc
Confidence            789999999999999999877      89999998766555554443

>KOG0643|consensus

Probab=99.59  E-value=5.5e-14  Score=95.61  Aligned_cols=120  Identities=13%  Similarity=0.210  Sum_probs=97.4

Q ss_pred             eecCcEEEEE--eCCCCccEEEEEecCCeEEEEeCCCCC-----------------------------------------
Q psy7062          10 TAFGQISTVF--DSKHLVEMVAALGGYQHIRMYDFGSNN-----------------------------------------   46 (148)
Q Consensus        10 ~~~~~~~~~~--~~~~~~~~l~~~~~d~~v~~~d~~~~~-----------------------------------------   46 (148)
                      +..||....|  |.+.....+++|+.|.++++||+++++                                         
T Consensus        47 ty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fd  126 (327)
T KOG0643|consen   47 TYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFD  126 (327)
T ss_pred             eecCCCceEEEEEecCCcceeeeccccceeEEEEcCCCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEE
Confidence            4556666666  466669999999999999999999885                                         


Q ss_pred             ----------CCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--cc-------ccceEEEEccCCCEEE
Q psy7062          47 ----------PNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--FI-------QQVNALRITPDKQLLA  107 (148)
Q Consensus        47 ----------~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--~~-------~~i~~~~~sp~~~~l~  107 (148)
                                .++...+..+.+.++.+-|.|-++++++|..+|.|..||++++  +.       ..|+.++++|+..+++
T Consensus       127 i~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~Fi  206 (327)
T KOG0643|consen  127 IRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFI  206 (327)
T ss_pred             ccCChhhhcccCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEE
Confidence                      1122333344567888999999999999999999999999997  11       7899999999999999


Q ss_pred             EEecCCceecCeeEEEeecCCCcceecc
Q psy7062         108 SAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus       108 ~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                      +++.|.      +-++||.++.+....+
T Consensus       207 T~s~Dt------takl~D~~tl~v~Kty  228 (327)
T KOG0643|consen  207 TGSKDT------TAKLVDVRTLEVLKTY  228 (327)
T ss_pred             ecccCc------cceeeeccceeeEEEe
Confidence            999988      8999998877765544

>KOG0265|consensus

Probab=99.58  E-value=5.6e-14  Score=96.74  Aligned_cols=115  Identities=19%  Similarity=0.211  Sum_probs=90.8

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      .....|+|+  |.+|++|+.|..|.+|++-.- .+....+++|.+.|..+.|.+|++.+++++.|.+++.||.+++    
T Consensus        50 I~~~~F~P~--gs~~aSgG~Dr~I~LWnv~gd-ceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~~r  126 (338)
T KOG0265|consen   50 IYTIKFHPD--GSCFASGGSDRAIVLWNVYGD-CENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGKRIR  126 (338)
T ss_pred             EEEEEECCC--CCeEeecCCcceEEEEecccc-ccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEecccceeee
Confidence            356677885  999999999999999997543 2567788899999999999999999999999999999999998    


Q ss_pred             -cc---ccceEEEEccCC-CEEEEEecCCceecCeeEEEeecCCCcceeccCc
Q psy7062          90 -FI---QQVNALRITPDK-QLLASAEELSCCYCGAAVFVYNSCYPAAVVASNT  137 (148)
Q Consensus        90 -~~---~~i~~~~~sp~~-~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~  137 (148)
                       ++   .-++.+.-+.-| +.+.+++.|+      ++++||.+...++...+.
T Consensus       127 k~k~h~~~vNs~~p~rrg~~lv~SgsdD~------t~kl~D~R~k~~~~t~~~  173 (338)
T KOG0265|consen  127 KHKGHTSFVNSLDPSRRGPQLVCSGSDDG------TLKLWDIRKKEAIKTFEN  173 (338)
T ss_pred             hhccccceeeecCccccCCeEEEecCCCc------eEEEEeecccchhhcccc
Confidence             33   334444433334 4566677777      999999997666655543

>KOG1407|consensus

Probab=99.58  E-value=2.8e-14  Score=96.69  Aligned_cols=66  Identities=29%  Similarity=0.492  Sum_probs=59.9

Q ss_pred             CceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc---ccceEEEEccCCCEEEEEecCC
Q psy7062          48 NPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI---QQVNALRITPDKQLLASAEELS  113 (148)
Q Consensus        48 ~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~---~~i~~~~~sp~~~~l~~~~~d~  113 (148)
                      +++..+++|+....+|.|+|+|+++++|+-|..+.|||+...     |.   -+|+.+.|+.+|++|+++++|-
T Consensus       180 kpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lASaSEDh  253 (313)
T KOG1407|consen  180 KPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFSHDGRMLASASEDH  253 (313)
T ss_pred             ccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeeccccCceEEEEeccCcceeeccCccc
Confidence            566777889999999999999999999999999999999876     33   7899999999999999999988

>KOG0269|consensus

Probab=99.58  E-value=1.5e-14  Score=109.74  Aligned_cols=115  Identities=17%  Similarity=0.299  Sum_probs=94.4

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---   89 (148)
                      ....++|.|.. +..++++.+.|.+.+||++... +....+.+|.+.|.++.|+|++.+|++|++|+++++||..+.   
T Consensus       178 SiRDV~fsp~~-~~~F~s~~dsG~lqlWDlRqp~-r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~  255 (839)
T KOG0269|consen  178 SIRDVKFSPGY-GNKFASIHDSGYLQLWDLRQPD-RCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAK  255 (839)
T ss_pred             hhhceeeccCC-CceEEEecCCceEEEeeccCch-hHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCcc
Confidence            35678888865 7888998999999999999862 567788899999999999999999999999999999999865   


Q ss_pred             ----cc--ccceEEEEccCCC-EEEEEecCCceecCeeEEEeecCCCccee
Q psy7062          90 ----FI--QQVNALRITPDKQ-LLASAEELSCCYCGAAVFVYNSCYPAAVV  133 (148)
Q Consensus        90 ----~~--~~i~~~~~sp~~~-~l~~~~~d~~~~~~~~i~~~d~~~~~~~~  133 (148)
                          +.  .++.++.|-|..+ +|++++.-+    ...|++||++.+-.+.
T Consensus       256 ~~~tInTiapv~rVkWRP~~~~hLAtcsmv~----dtsV~VWDvrRPYIP~  302 (839)
T KOG0269|consen  256 PKHTINTIAPVGRVKWRPARSYHLATCSMVV----DTSVHVWDVRRPYIPY  302 (839)
T ss_pred             ceeEEeecceeeeeeeccCccchhhhhhccc----cceEEEEeeccccccc
Confidence                22  8899999999766 566655322    4479999999775443

>KOG1539|consensus

Probab=99.58  E-value=1.1e-14  Score=111.21  Aligned_cols=105  Identities=19%  Similarity=0.413  Sum_probs=92.0

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..+..++..  ..+++.+.+|=.|+++|..+.  +.++.+.+|+..|+.++|||||+|+++++.|++|++||+.++    
T Consensus       537 ~~~iv~hr~--s~l~a~~~ddf~I~vvD~~t~--kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID  612 (910)
T KOG1539|consen  537 ITGIVYHRV--SDLLAIALDDFSIRVVDVVTR--KVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLID  612 (910)
T ss_pred             cceeeeeeh--hhhhhhhcCceeEEEEEchhh--hhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceee
Confidence            456666665  778888888889999999998  899999999999999999999999999999999999999998    


Q ss_pred             -cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          90 -FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        90 -~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                       +.  .++.++.|+|+|.+|+++..|.    . -|++|--.
T Consensus       613 ~~~vd~~~~sls~SPngD~LAT~Hvd~----~-gIylWsNk  648 (910)
T KOG1539|consen  613 GLLVDSPCTSLSFSPNGDFLATVHVDQ----N-GIYLWSNK  648 (910)
T ss_pred             eEecCCcceeeEECCCCCEEEEEEecC----c-eEEEEEch
Confidence             22  8899999999999999998865    3 48888643

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=99.57  E-value=3.5e-13  Score=92.81  Aligned_cols=111  Identities=20%  Similarity=0.381  Sum_probs=94.6

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..+++|+++  ++++++++.++.+.+|++.+.  +....+..|...+..+.|+|+++.+++++.++.+++||+...    
T Consensus        12 i~~~~~~~~--~~~l~~~~~~g~i~i~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~~~~   87 (289)
T cd00200          12 VTCVAFSPD--GKLLATGSGDGTIKVWDLETG--ELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECVR   87 (289)
T ss_pred             EEEEEEcCC--CCEEEEeecCcEEEEEEeeCC--CcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcccceE
Confidence            457777777  889999899999999999987  677788889999999999999999999999999999999874    


Q ss_pred             -cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceec
Q psy7062          90 -FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVA  134 (148)
Q Consensus        90 -~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~  134 (148)
                       +.   ..+.++.|+|+++.+++++.++      .+.+||+.+.+....
T Consensus        88 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~------~i~~~~~~~~~~~~~  130 (289)
T cd00200          88 TLTGHTSYVSSVAFSPDGRILSSSSRDK------TIKVWDVETGKCLTT  130 (289)
T ss_pred             EEeccCCcEEEEEEcCCCCEEEEecCCC------eEEEEECCCcEEEEE
Confidence             22   5799999999988888888777      899999986554443

>KOG0293|consensus

Probab=99.57  E-value=4.6e-14  Score=100.90  Aligned_cols=103  Identities=13%  Similarity=0.154  Sum_probs=88.5

Q ss_pred             EEEeCCCCccEEEEEecCCeEEEEeCCCCC-CCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----c
Q psy7062          17 TVFDSKHLVEMVAALGGYQHIRMYDFGSNN-PNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----F   90 (148)
Q Consensus        17 ~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~-~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~   90 (148)
                      +.|+++  |.+||+++.|.+..+|++..-. .+...++.+|...|..+.||||.+++++|+.+..+++||..++     +
T Consensus       230 l~FS~n--GkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y  307 (519)
T KOG0293|consen  230 LQFSHN--GKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLY  307 (519)
T ss_pred             EEEcCC--CeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcchhhhhc
Confidence            344555  9999999999999999886431 2346788899999999999999999999999999999999998     2


Q ss_pred             c----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          91 I----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        91 ~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                      .    ..+.+.+|.|||..+++|+.|+      ++..||+.
T Consensus       308 ~~~~~~S~~sc~W~pDg~~~V~Gs~dr------~i~~wdlD  342 (519)
T KOG0293|consen  308 PSGLGFSVSSCAWCPDGFRFVTGSPDR------TIIMWDLD  342 (519)
T ss_pred             ccCcCCCcceeEEccCCceeEecCCCC------cEEEecCC
Confidence            2    5688899999999999999988      88889876

>KOG0303|consensus

Probab=99.57  E-value=2.9e-14  Score=101.31  Aligned_cols=114  Identities=16%  Similarity=0.201  Sum_probs=95.5

Q ss_pred             EEEEeCCCCccEEEEEecCCeEEEEeCCCCC-----CCceEEecCCCCCEEEEEEccC-CCEEEEEeCCCcEEEEECCcc
Q psy7062          16 STVFDSKHLVEMVAALGGYQHIRMYDFGSNN-----PNPVINCEGVSKNVVEVGFQED-GKWMFTGGEDCRARIWDLSLC   89 (148)
Q Consensus        16 ~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~-----~~~~~~~~~~~~~i~~~~~sp~-~~~l~~~~~~~~i~l~d~~~~   89 (148)
                      .++|+|. +.+.+|+||+|.+|.+|++....     .+++..+.+|...|..+.|+|- .+.|++++.|+++.+||+.++
T Consensus        86 Di~w~Pf-nD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tg  164 (472)
T KOG0303|consen   86 DIDWCPF-NDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTG  164 (472)
T ss_pred             ccccCcc-CCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceEEEEeccCC
Confidence            3455554 47889999999999999997542     1457788899999999999994 568899999999999999998


Q ss_pred             -----cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062          90 -----FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN  136 (148)
Q Consensus        90 -----~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~  136 (148)
                           +.  .-|+++.|+-+|.+|++++.|.      +|++||.+..+.+..-.
T Consensus       165 eali~l~hpd~i~S~sfn~dGs~l~TtckDK------kvRv~dpr~~~~v~e~~  212 (472)
T KOG0303|consen  165 EALITLDHPDMVYSMSFNRDGSLLCTTCKDK------KVRVIDPRRGTVVSEGV  212 (472)
T ss_pred             ceeeecCCCCeEEEEEeccCCceeeeecccc------eeEEEcCCCCcEeeecc
Confidence                 22  7799999999999999999999      99999999887665443

>KOG0264|consensus

Probab=99.56  E-value=4.1e-14  Score=101.52  Aligned_cols=125  Identities=14%  Similarity=0.216  Sum_probs=98.5

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCC-----CceEEecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEECCc
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNP-----NPVINCEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIWDLSL   88 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~-----~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d~~~   88 (148)
                      ..++|.+... ..|++++.|+++.+||+.....     .+...+.+|...|..++|+| +...+.+++.|+.+.|||+|+
T Consensus       181 ~glsWn~~~~-g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~  259 (422)
T KOG0264|consen  181 YGLSWNRQQE-GTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRS  259 (422)
T ss_pred             cccccccccc-eeEeeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCC
Confidence            4567776654 4556669999999999986522     24567788999999999999 556788999999999999995


Q ss_pred             c-------cc---ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeecCCCcceeccCcccCcceeec
Q psy7062          89 C-------FI---QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTLVKPQVTRA  146 (148)
Q Consensus        89 ~-------~~---~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~  146 (148)
                      .       ..   +.++|++|+| ++..|++++.|+      +|++||+|+...+....+.+++.+.++
T Consensus       260 ~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~------tV~LwDlRnL~~~lh~~e~H~dev~~V  322 (422)
T KOG0264|consen  260 NTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADK------TVALWDLRNLNKPLHTFEGHEDEVFQV  322 (422)
T ss_pred             CCCCCcccccccCCceeEEEeCCCCCceEEeccCCC------cEEEeechhcccCceeccCCCcceEEE
Confidence            3       11   8899999999 777899999988      999999999887655555566655543

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=99.56  E-value=4.4e-13  Score=92.33  Aligned_cols=112  Identities=18%  Similarity=0.332  Sum_probs=93.6

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..++.|+++  ++++++++.++.+.+||+++.  +....+..|...+.+++|+|++.++++++.++.+++||++..    
T Consensus        96 i~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~  171 (289)
T cd00200          96 VSSVAFSPD--GRILSSSSRDKTIKVWDVETG--KCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVA  171 (289)
T ss_pred             EEEEEEcCC--CCEEEEecCCCeEEEEECCCc--EEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEccccccce
Confidence            355666666  788888677999999999977  777888889999999999999999999988999999999865    


Q ss_pred             -cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          90 -FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        90 -~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                       +.   ..+.++.|+|+++.+++++.++      .+++||.+..+.....
T Consensus       172 ~~~~~~~~i~~~~~~~~~~~l~~~~~~~------~i~i~d~~~~~~~~~~  215 (289)
T cd00200         172 TLTGHTGEVNSVAFSPDGEKLLSSSSDG------TIKLWDLSTGKCLGTL  215 (289)
T ss_pred             eEecCccccceEEECCCcCEEEEecCCC------cEEEEECCCCceecch
Confidence             22   5799999999999999998877      8999999865544433

>KOG1445|consensus

Probab=99.56  E-value=1.5e-14  Score=108.26  Aligned_cols=112  Identities=15%  Similarity=0.216  Sum_probs=93.4

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCC-----CceEEecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEEC
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNP-----NPVINCEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIWDL   86 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~-----~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d~   86 (148)
                      ....+.|+|-. .+.|+++++|+.|++|.+..+..     .+...+..|...|+++.|+| ....+++++.|.+|++||+
T Consensus       629 ~vtDl~WdPFD-~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl  707 (1012)
T KOG1445|consen  629 LVTDLHWDPFD-DERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDL  707 (1012)
T ss_pred             eeeecccCCCC-hHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeeh
Confidence            34567777743 67788889999999999975432     23456778999999999999 5668899999999999999


Q ss_pred             Ccc-----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          87 SLC-----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        87 ~~~-----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                      .+.     |.   ..|..++|||+|+.+++.+.||      +|++|+.+....
T Consensus       708 ~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg------~~rVy~Prs~e~  754 (1012)
T KOG1445|consen  708 ANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDG------TLRVYEPRSREQ  754 (1012)
T ss_pred             hhhhhhheeccCcCceeEEEECCCCcceeeeecCc------eEEEeCCCCCCC
Confidence            987     33   8899999999999999999999      999999886543

>KOG0313|consensus

Probab=99.55  E-value=9.6e-14  Score=98.16  Aligned_cols=105  Identities=17%  Similarity=0.288  Sum_probs=89.6

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----   89 (148)
                      ..+.|..   ...+++++.|.+|+.||+.++  ..+..+. ......+++++|..+.+++|+.|..+++||.+++     
T Consensus       264 s~V~w~d---~~v~yS~SwDHTIk~WDletg--~~~~~~~-~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v  337 (423)
T KOG0313|consen  264 SSVVWSD---ATVIYSVSWDHTIKVWDLETG--GLKSTLT-TNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVV  337 (423)
T ss_pred             eeEEEcC---CCceEeecccceEEEEEeecc--cceeeee-cCcceeEeecccccceeeecCCCCceeecCCCCCCCcee
Confidence            4555655   456788899999999999998  6676765 4677899999999999999999999999999987     


Q ss_pred             ---cc---ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          90 ---FI---QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        90 ---~~---~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                         |.   ..+..+.|+| +..+|++++.|+      ++++||+++...
T Consensus       338 ~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~------t~klWDvRS~k~  380 (423)
T KOG0313|consen  338 SQSLIGHKNWVSSVKWSPTNEFQLVSGSYDN------TVKLWDVRSTKA  380 (423)
T ss_pred             EEeeecchhhhhheecCCCCceEEEEEecCC------eEEEEEeccCCC
Confidence               22   8899999999 667899999988      999999998773

>KOG0643|consensus

Probab=99.54  E-value=2.8e-13  Score=92.27  Aligned_cols=71  Identities=14%  Similarity=0.219  Sum_probs=66.5

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~   89 (148)
                      ..+.|..+  |++|.+++.|.+..+|-..++  +.+.++.+|++.|.+++.+-+.+.+++|+-|.+++|||++++
T Consensus        14 TqiKyN~e--GDLlFscaKD~~~~vw~s~nG--erlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tG   84 (327)
T KOG0643|consen   14 TQIKYNRE--GDLLFSCAKDSTPTVWYSLNG--ERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETG   84 (327)
T ss_pred             ceEEecCC--CcEEEEecCCCCceEEEecCC--ceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCC
Confidence            45677776  999999999999999999888  999999999999999999999999999999999999999988

>KOG0296|consensus

Probab=99.54  E-value=3.5e-13  Score=94.93  Aligned_cols=112  Identities=8%  Similarity=0.160  Sum_probs=96.9

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..++.|+.+  |.+||+|..+|.+++|+..++  .....+...-..+.=+.|+|.+..++.|+.||.+++|.+.+.    
T Consensus       109 Vt~~~Fshd--gtlLATGdmsG~v~v~~~stg--~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~k  184 (399)
T KOG0296|consen  109 VTCCSFSHD--GTLLATGDMSGKVLVFKVSTG--GEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCK  184 (399)
T ss_pred             eEEEEEccC--ceEEEecCCCccEEEEEcccC--ceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCcceee
Confidence            345666666  999999999999999999998  666777656677888999999999999999999999999985    


Q ss_pred             -cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          90 -FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        90 -~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                       +.   .++.+-.|.|+|+.++++..||      +|++||+.+.++....
T Consensus       185 v~~Gh~~~ct~G~f~pdGKr~~tgy~dg------ti~~Wn~ktg~p~~~~  228 (399)
T KOG0296|consen  185 VMSGHNSPCTCGEFIPDGKRILTGYDDG------TIIVWNPKTGQPLHKI  228 (399)
T ss_pred             EecCCCCCcccccccCCCceEEEEecCc------eEEEEecCCCceeEEe
Confidence             33   8889999999999999999988      9999999988766544

>KOG0276|consensus

Probab=99.54  E-value=1.2e-13  Score=103.05  Aligned_cols=113  Identities=18%  Similarity=0.273  Sum_probs=99.3

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----   89 (148)
                      .++.|-++  .+-+++|++|..|++|+.++.  +.+.+|.+|..-|.+++++|..-+++++|.|.+|++||....     
T Consensus        59 Ra~kfiaR--knWiv~GsDD~~IrVfnynt~--ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~q  134 (794)
T KOG0276|consen   59 RAAKFIAR--KNWIVTGSDDMQIRVFNYNTG--EKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQ  134 (794)
T ss_pred             hhheeeec--cceEEEecCCceEEEEecccc--eeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeee
Confidence            34455555  677899999999999999999  999999999999999999999999999999999999999987     


Q ss_pred             -cc---ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeecCCCcceeccCc
Q psy7062          90 -FI---QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNT  137 (148)
Q Consensus        90 -~~---~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~  137 (148)
                       |+   ..+.+++|.| |.+.+++++-|+      +|++|.+-.+.+.-++++
T Consensus       135 tfeGH~HyVMqv~fnPkD~ntFaS~sLDr------TVKVWslgs~~~nfTl~g  181 (794)
T KOG0276|consen  135 TFEGHEHYVMQVAFNPKDPNTFASASLDR------TVKVWSLGSPHPNFTLEG  181 (794)
T ss_pred             EEcCcceEEEEEEecCCCccceeeeeccc------cEEEEEcCCCCCceeeec
Confidence             54   8899999999 788999999999      999999887766555443

>KOG0305|consensus

Probab=99.54  E-value=1.5e-13  Score=101.68  Aligned_cols=122  Identities=16%  Similarity=0.093  Sum_probs=97.1

Q ss_pred             eeecCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEcc-CCCEEEEE--eCCCcEEEEE
Q psy7062           9 LTAFGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQE-DGKWMFTG--GEDCRARIWD   85 (148)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~--~~~~~i~l~d   85 (148)
                      +..+.+..+.+....++.+||+|+.|+.+.+||....  +++..+..|...|..++||| ....|++|  +.|+.|++||
T Consensus       297 ~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~--~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn  374 (484)
T KOG0305|consen  297 LQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSP--EPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWN  374 (484)
T ss_pred             hhcccceeeeeEECCCCCeeccCCCccceEeccCCCc--cccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEE
Confidence            3445555555544444999999999999999999776  78888889999999999999 55677775  4689999999


Q ss_pred             CCcc--cc-----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062          86 LSLC--FI-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN  136 (148)
Q Consensus        86 ~~~~--~~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~  136 (148)
                      ..++  +.     ..|+.+.|++..+.|+++-...    ...|.+|+..+........
T Consensus       375 ~~~g~~i~~vdtgsQVcsL~Wsk~~kEi~sthG~s----~n~i~lw~~ps~~~~~~l~  428 (484)
T KOG0305|consen  375 TNTGARIDSVDTGSQVCSLIWSKKYKELLSTHGYS----ENQITLWKYPSMKLVAELL  428 (484)
T ss_pred             cCCCcEecccccCCceeeEEEcCCCCEEEEecCCC----CCcEEEEeccccceeeeec
Confidence            9988  22     8899999999998888876544    4589999998766655443

>KOG0267|consensus

Probab=99.53  E-value=1e-14  Score=110.03  Aligned_cols=110  Identities=25%  Similarity=0.389  Sum_probs=96.2

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..++.|+..  ..+|++|+.+|+|++||++..  +.++++.+|...+..+.|+|-+.+.++++.|..+.+||++..    
T Consensus        73 IeSl~f~~~--E~LlaagsasgtiK~wDleeA--k~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~  148 (825)
T KOG0267|consen   73 IESLTFDTS--ERLLAAGSASGTIKVWDLEEA--KIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSH  148 (825)
T ss_pred             ceeeecCcc--hhhhcccccCCceeeeehhhh--hhhhhhhccccCcceeeeccceEEeccccccccceehhhhccCcee
Confidence            457777776  788999999999999999998  888999999999999999999999999999999999999954    


Q ss_pred             -cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCccee
Q psy7062          90 -FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVV  133 (148)
Q Consensus        90 -~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~  133 (148)
                       +.   ..+..+.|+|+|++++.+++|.      .+++||.+..+...
T Consensus       149 ~~~s~~~vv~~l~lsP~Gr~v~~g~ed~------tvki~d~~agk~~~  190 (825)
T KOG0267|consen  149 TYKSHTRVVDVLRLSPDGRWVASGGEDN------TVKIWDLTAGKLSK  190 (825)
T ss_pred             eecCCcceeEEEeecCCCceeeccCCcc------eeeeeccccccccc
Confidence             32   5577889999999999999977      99999997655443

>KOG1407|consensus

Probab=99.53  E-value=1.8e-13  Score=92.84  Aligned_cols=108  Identities=16%  Similarity=0.121  Sum_probs=91.9

Q ss_pred             EEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----c
Q psy7062          16 STVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----F   90 (148)
Q Consensus        16 ~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~   90 (148)
                      |+.|+|+  |++||+|+.|-.+.+||++..  -+++.+.-+.-.|..++||.||++|+++++|..|-+=+.+++     +
T Consensus       194 cI~f~p~--GryfA~GsADAlvSLWD~~EL--iC~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~vetGd~~~eI  269 (313)
T KOG1407|consen  194 CIEFDPD--GRYFATGSADALVSLWDVDEL--ICERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVETGDRVWEI  269 (313)
T ss_pred             EEEECCC--CceEeeccccceeeccChhHh--hhheeeccccCceEEEEeccCcceeeccCccceEEeEecccCCeEEEe
Confidence            4455566  999999999999999999987  788999889999999999999999999999999999899888     3


Q ss_pred             c--ccceEEEEccCCCEEEEEecCCce---ecCeeEEEeecC
Q psy7062          91 I--QQVNALRITPDKQLLASAEELSCC---YCGAAVFVYNSC  127 (148)
Q Consensus        91 ~--~~i~~~~~sp~~~~l~~~~~d~~~---~~~~~i~~~d~~  127 (148)
                      +  ++...++|+|...+|+.++.|...   ...+.++++-++
T Consensus       270 ~~~~~t~tVAWHPk~~LLAyA~ddk~~d~~reag~vKiFG~~  311 (313)
T KOG1407|consen  270 PCEGPTFTVAWHPKRPLLAYACDDKDGDSNREAGTVKIFGLS  311 (313)
T ss_pred             eccCCceeEEecCCCceeeEEecCCCCccccccceeEEecCC
Confidence            3  889999999999999999887732   122567776554

>KOG0282|consensus

Probab=99.53  E-value=1.3e-13  Score=99.84  Aligned_cols=107  Identities=14%  Similarity=0.263  Sum_probs=92.2

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCC-CEEEEEeCCCcEEEEECCcc--cc
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDG-KWMFTGGEDCRARIWDLSLC--FI   91 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~-~~l~~~~~~~~i~l~d~~~~--~~   91 (148)
                      ..++|+..  |..+.+++-|+.+++||++++  +.+..+. ....++++.++|++ +.+++|..|+.|+.||++++  .+
T Consensus       262 rd~~~s~~--g~~fLS~sfD~~lKlwDtETG--~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvq  336 (503)
T KOG0282|consen  262 RDASFNNC--GTSFLSASFDRFLKLWDTETG--QVLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQ  336 (503)
T ss_pred             hhhhcccc--CCeeeeeecceeeeeeccccc--eEEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHH
Confidence            34555555  888888899999999999999  7888876 46778999999988 78999999999999999999  22


Q ss_pred             ------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062          92 ------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV  132 (148)
Q Consensus        92 ------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~  132 (148)
                            +.+..+.|-++++.++++++|+      .+++|+.+.+.++
T Consensus       337 eYd~hLg~i~~i~F~~~g~rFissSDdk------s~riWe~~~~v~i  377 (503)
T KOG0282|consen  337 EYDRHLGAILDITFVDEGRRFISSSDDK------SVRIWENRIPVPI  377 (503)
T ss_pred             HHHhhhhheeeeEEccCCceEeeeccCc------cEEEEEcCCCccc
Confidence                  8899999999999999999988      9999998876544

>KOG0639|consensus

Probab=99.53  E-value=3.5e-14  Score=103.80  Aligned_cols=110  Identities=23%  Similarity=0.308  Sum_probs=96.7

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---   89 (148)
                      ++.|.+.+.+.+.+++.+++.||.|.+||+.+.  ..+++|++|+..+.+|.+++||..|-+|+.|++++.||++.+   
T Consensus       509 apaCyALa~spDakvcFsccsdGnI~vwDLhnq--~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrql  586 (705)
T KOG0639|consen  509 APACYALAISPDAKVCFSCCSDGNIAVWDLHNQ--TLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQL  586 (705)
T ss_pred             chhhhhhhcCCccceeeeeccCCcEEEEEcccc--eeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhh
Confidence            456777766666899999999999999999988  889999999999999999999999999999999999999988   


Q ss_pred             ----ccccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 ----FIQQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 ----~~~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                          |.+.|.++.+.|++.++++|-+++      .+.+...+.+.
T Consensus       587 qqhdF~SQIfSLg~cP~~dWlavGMens------~vevlh~skp~  625 (705)
T KOG0639|consen  587 QQHDFSSQIFSLGYCPTGDWLAVGMENS------NVEVLHTSKPE  625 (705)
T ss_pred             hhhhhhhhheecccCCCccceeeecccC------cEEEEecCCcc
Confidence                348899999999999999999866      67777666544

>KOG0275|consensus

Probab=99.52  E-value=1.9e-14  Score=100.48  Aligned_cols=110  Identities=15%  Similarity=0.205  Sum_probs=92.8

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCc------eEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECC
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNP------VINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLS   87 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~------~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~   87 (148)
                      ..|..|+|+  |++|++|+-||-+.+||.-+++.+.      ...+-.+...|.+++||.|..++++|+.||.|++|.++
T Consensus       216 ~EcA~FSPD--gqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~  293 (508)
T KOG0275|consen  216 VECARFSPD--GQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIE  293 (508)
T ss_pred             hhheeeCCC--CceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEe
Confidence            468889999  9999999999999999999883221      11223367899999999999999999999999999999


Q ss_pred             cc-----cc----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          88 LC-----FI----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        88 ~~-----~~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                      ++     |.    ..++|+.|+.|+.++++++.|-      ++++--+.+.+.
T Consensus       294 tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~------tvRiHGlKSGK~  340 (508)
T KOG0275|consen  294 TGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQ------TVRIHGLKSGKC  340 (508)
T ss_pred             cchHHHHhhhhhccCeeEEEEccCcchhhcccccc------eEEEeccccchh
Confidence            98     43    7899999999999999999977      788877665543

>KOG0973|consensus

Probab=99.52  E-value=2.2e-13  Score=106.27  Aligned_cols=107  Identities=14%  Similarity=0.165  Sum_probs=93.8

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCC-----CC-----------CCceEEecCCCCCEEEEEEccCCCEEEEEeC
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGS-----NN-----------PNPVINCEGVSKNVVEVGFQEDGKWMFTGGE   77 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~-----~~-----------~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~   77 (148)
                      ..|+.|+++  |++||+|++|+.|.+|....     ..           .+....+.+|...|..++|+|++.++++++.
T Consensus        72 v~CVR~S~d--G~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~  149 (942)
T KOG0973|consen   72 VNCVRFSPD--GSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSL  149 (942)
T ss_pred             eeEEEECCC--CCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecc
Confidence            567889998  99999999999999999883     00           1246678899999999999999999999999


Q ss_pred             CCcEEEEECCcc-----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062          78 DCRARIWDLSLC-----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        78 ~~~i~l~d~~~~-----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                      |+++.+|+.++.     +.   ..+-.+.|.|-|++|++-+.|+      +|++|+..+
T Consensus       150 DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDr------tikvwrt~d  202 (942)
T KOG0973|consen  150 DNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDR------TLKVWRTSD  202 (942)
T ss_pred             cceEEEEccccceeeeeeecccccccceEECCccCeeeeecCCc------eEEEEEccc
Confidence            999999999988     32   7788999999999999999999      999999654

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.52  E-value=1e-12  Score=88.02  Aligned_cols=107  Identities=13%  Similarity=0.235  Sum_probs=82.6

Q ss_pred             cEEEEEeCCCCccEEEE--EecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC---CcEEEEECCc
Q psy7062          14 QISTVFDSKHLVEMVAA--LGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED---CRARIWDLSL   88 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~--~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~---~~i~l~d~~~   88 (148)
                      ...++|+|+  ++.+++  |..+..+.+||++.   +.+..+.  ...+..+.|+|+|++++.++.+   |.+.+||.++
T Consensus        62 I~~~~WsP~--g~~favi~g~~~~~v~lyd~~~---~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~  134 (194)
T PF08662_consen   62 IHDVAWSPN--GNEFAVIYGSMPAKVTLYDVKG---KKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRK  134 (194)
T ss_pred             eEEEEECcC--CCEEEEEEccCCcccEEEcCcc---cEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCC
Confidence            578888888  555443  33556899999973   5677764  4567889999999999998754   6799999987


Q ss_pred             c-----cc-ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          89 C-----FI-QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        89 ~-----~~-~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                      .     +. ..+..++|+|+|++++++...........+++|+..
T Consensus       135 ~~~i~~~~~~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~  179 (194)
T PF08662_consen  135 KKKISTFEHSDATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQ  179 (194)
T ss_pred             CEEeeccccCcEEEEEEcCCCCEEEEEEeccceeccccEEEEEec
Confidence            7     22 567899999999999999876544445578999986

>KOG0270|consensus

Probab=99.52  E-value=2.9e-13  Score=97.30  Aligned_cols=106  Identities=11%  Similarity=0.236  Sum_probs=90.0

Q ss_pred             EEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEECCcc-----
Q psy7062          16 STVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIWDLSLC-----   89 (148)
Q Consensus        16 ~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d~~~~-----   89 (148)
                      .++|.... ..+||+||.|.+|++||+.++  ++..++.-|...|.++.|+| .+..+++|+.|+++.+.|++..     
T Consensus       248 ~Ls~n~~~-~nVLaSgsaD~TV~lWD~~~g--~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~  324 (463)
T KOG0270|consen  248 ALSWNRNF-RNVLASGSADKTVKLWDVDTG--KPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGK  324 (463)
T ss_pred             HHHhcccc-ceeEEecCCCceEEEEEcCCC--CcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCc
Confidence            34444332 789999999999999999999  88888888999999999998 6779999999999999999944     


Q ss_pred             -cc--ccceEEEEccC-CCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 -FI--QQVNALRITPD-KQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 -~~--~~i~~~~~sp~-~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                       ++  +.+-.++|.|. ...++++..||      +++-+|.|.+.
T Consensus       325 ~wk~~g~VEkv~w~~~se~~f~~~tddG------~v~~~D~R~~~  363 (463)
T KOG0270|consen  325 EWKFDGEVEKVAWDPHSENSFFVSTDDG------TVYYFDIRNPG  363 (463)
T ss_pred             eEEeccceEEEEecCCCceeEEEecCCc------eEEeeecCCCC
Confidence             22  88999999994 45777888888      99999999884

>KOG0281|consensus

Probab=99.52  E-value=8.9e-14  Score=97.84  Aligned_cols=99  Identities=17%  Similarity=0.311  Sum_probs=82.7

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--------cc---cc
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--------FI---QQ   93 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--------~~---~~   93 (148)
                      ..++++|+.|.+|++||++++  +++.++-.|...|..+.|+  ..++++++.|.++.+||+.+.        +.   ..
T Consensus       247 ~rviisGSSDsTvrvWDv~tg--e~l~tlihHceaVLhlrf~--ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAa  322 (499)
T KOG0281|consen  247 ERVIVSGSSDSTVRVWDVNTG--EPLNTLIHHCEAVLHLRFS--NGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAA  322 (499)
T ss_pred             ceEEEecCCCceEEEEeccCC--chhhHHhhhcceeEEEEEe--CCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhh
Confidence            569999999999999999999  9999998899999888884  568999999999999999877        22   66


Q ss_pred             ceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          94 VNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        94 i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                      ++.+.|  +.+++++++.|+      +|++|+..+..-+..+
T Consensus       323 VNvVdf--d~kyIVsASgDR------TikvW~~st~efvRtl  356 (499)
T KOG0281|consen  323 VNVVDF--DDKYIVSASGDR------TIKVWSTSTCEFVRTL  356 (499)
T ss_pred             eeeecc--ccceEEEecCCc------eEEEEeccceeeehhh
Confidence            777777  566899999888      9999998776655443

>KOG0294|consensus

Probab=99.51  E-value=2.8e-13  Score=93.95  Aligned_cols=105  Identities=18%  Similarity=0.212  Sum_probs=91.1

Q ss_pred             EEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCC--EEEEEeCCCcEEEEECCcc----
Q psy7062          16 STVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGK--WMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        16 ~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~--~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..+...+  +.++|+|+.|.+|++||++..  ..+..+..|.+.|+++.|.+.-.  .|++|+.||.|.+|+..+.    
T Consensus        46 itavAVs--~~~~aSGssDetI~IYDm~k~--~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~  121 (362)
T KOG0294|consen   46 ITALAVS--GPYVASGSSDETIHIYDMRKR--KQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLK  121 (362)
T ss_pred             eeEEEec--ceeEeccCCCCcEEEEeccch--hhhcceeccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEee
Confidence            3333444  789999999999999999988  77888888999999999998665  9999999999999999887    


Q ss_pred             -cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 -FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 -~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                       +.   ++++.++.+|.++.-++.+.|+      .++.||+-.++
T Consensus       122 slK~H~~~Vt~lsiHPS~KLALsVg~D~------~lr~WNLV~Gr  160 (362)
T KOG0294|consen  122 SLKAHKGQVTDLSIHPSGKLALSVGGDQ------VLRTWNLVRGR  160 (362)
T ss_pred             eecccccccceeEecCCCceEEEEcCCc------eeeeehhhcCc
Confidence             33   7799999999999999999988      89999976554

>KOG0310|consensus

Probab=99.50  E-value=1.3e-13  Score=99.91  Aligned_cols=106  Identities=17%  Similarity=0.244  Sum_probs=89.8

Q ss_pred             EEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCC-EEEEEeCCCcEEEEECCcc-----c
Q psy7062          17 TVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGK-WMFTGGEDCRARIWDLSLC-----F   90 (148)
Q Consensus        17 ~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~~~~~i~l~d~~~~-----~   90 (148)
                      .+.+..++|.+|+.|.+.|.|++||.++.  ..++.+.+|+..+..+.|+|.++ .+++|+.|+.+++||+.+.     +
T Consensus        72 ~s~~fR~DG~LlaaGD~sG~V~vfD~k~r--~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l  149 (487)
T KOG0310|consen   72 YSVDFRSDGRLLAAGDESGHVKVFDMKSR--VILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAEL  149 (487)
T ss_pred             eEEEeecCCeEEEccCCcCcEEEeccccH--HHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEe
Confidence            33344455999999999999999998776  67899999999999999999655 6677888899999999887     2


Q ss_pred             c---ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          91 I---QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        91 ~---~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                      .   ..+++.+|+| ++..+++|+-||      +|++||.+...
T Consensus       150 ~~htDYVR~g~~~~~~~hivvtGsYDg------~vrl~DtR~~~  187 (487)
T KOG0310|consen  150 SGHTDYVRCGDISPANDHIVVTGSYDG------KVRLWDTRSLT  187 (487)
T ss_pred             cCCcceeEeeccccCCCeEEEecCCCc------eEEEEEeccCC
Confidence            2   8899999999 556889999988      99999999773

>KOG0305|consensus

Probab=99.50  E-value=4.1e-13  Score=99.45  Aligned_cols=112  Identities=17%  Similarity=0.244  Sum_probs=98.0

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecC-CCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEG-VSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~-~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--   89 (148)
                      ....+.|+++  |.+|++|..+|.+.+||..+.  +.+..+.+ |...|.+++|+  +..+.+|+.++.|..+|++..  
T Consensus       219 ~vtSv~ws~~--G~~LavG~~~g~v~iwD~~~~--k~~~~~~~~h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~  292 (484)
T KOG0305|consen  219 LVTSVKWSPD--GSHLAVGTSDGTVQIWDVKEQ--KKTRTLRGSHASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQH  292 (484)
T ss_pred             ceEEEEECCC--CCEEEEeecCCeEEEEehhhc--cccccccCCcCceeEEEecc--CceEEEecCCCcEEEEEEecchh
Confidence            3567777777  999999999999999999988  78888888 99999999997  788899999999999999987  


Q ss_pred             ----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062          90 ----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN  136 (148)
Q Consensus        90 ----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~  136 (148)
                          +.   +.++.+.|++|++++++|+.|.      .+.+||...+.+...+.
T Consensus       293 ~~~~~~~H~qeVCgLkws~d~~~lASGgnDN------~~~Iwd~~~~~p~~~~~  340 (484)
T KOG0305|consen  293 VVSTLQGHRQEVCGLKWSPDGNQLASGGNDN------VVFIWDGLSPEPKFTFT  340 (484)
T ss_pred             hhhhhhcccceeeeeEECCCCCeeccCCCcc------ceEeccCCCccccEEEe
Confidence                22   8899999999999999999988      99999997666655443

>KOG1063|consensus

Probab=99.50  E-value=4.3e-13  Score=100.94  Aligned_cols=109  Identities=18%  Similarity=0.251  Sum_probs=92.3

Q ss_pred             CcEEEEEeCCCCccEEEEEecCC-----eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECC
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQ-----HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLS   87 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~-----~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~   87 (148)
                      +...++.+.++.++++|+++...     .|++|+..+.  ..+..+.+|.-.|+.++|||||++|++.++|.++.+|...
T Consensus       525 GyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W--~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~  602 (764)
T KOG1063|consen  525 GYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANW--LQVQELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQ  602 (764)
T ss_pred             ceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccch--hhhheecccceEEEEEEECCCCcEEEEeecCceEEeeeee
Confidence            33455555555599999988665     5999999987  6777889999999999999999999999999999999986


Q ss_pred             cc------cc------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          88 LC------FI------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        88 ~~------~~------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                      ..      |.      .-|+...|+|++.+++++++|.      +|++|..+..
T Consensus       603 ~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK------~VkVW~~~~~  650 (764)
T KOG1063|consen  603 EDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDK------KVKVWEEPDL  650 (764)
T ss_pred             cccchhhhhccccccceEEEEcccCcccceeEEecCCc------eEEEEeccCc
Confidence            55      22      5588899999999999999999      9999998766

>KOG1274|consensus

Probab=99.49  E-value=1e-12  Score=101.36  Aligned_cols=105  Identities=16%  Similarity=0.308  Sum_probs=93.1

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..+++|+.+  |.+++.||+|-.|++-+....  .....+.+|...|.++.|+|+++++++.+.||.+++||+.++    
T Consensus        99 ~r~~~v~g~--g~~iaagsdD~~vK~~~~~D~--s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~  174 (933)
T KOG1274|consen   99 IRDLAVSGS--GKMIAAGSDDTAVKLLNLDDS--SQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSK  174 (933)
T ss_pred             ceEEEEecC--CcEEEeecCceeEEEEecccc--chheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhhh
Confidence            467788877  999999999999999999988  788899999999999999999999999999999999999876    


Q ss_pred             -------------------------------------------------cc-------ccceEEEEccCCCEEEEEecCC
Q psy7062          90 -------------------------------------------------FI-------QQVNALRITPDKQLLASAEELS  113 (148)
Q Consensus        90 -------------------------------------------------~~-------~~i~~~~~sp~~~~l~~~~~d~  113 (148)
                                                                       |.       ..+..+.|+|+|++|++++.++
T Consensus       175 tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g  254 (933)
T KOG1274|consen  175 TLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLDG  254 (933)
T ss_pred             hcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCCCcEEeeeccCC
Confidence                                                             00       3477889999999999999888


Q ss_pred             ceecCeeEEEeecCC
Q psy7062         114 CCYCGAAVFVYNSCY  128 (148)
Q Consensus       114 ~~~~~~~i~~~d~~~  128 (148)
                            .|.+||+.+
T Consensus       255 ------~I~vWnv~t  263 (933)
T KOG1274|consen  255 ------QILVWNVDT  263 (933)
T ss_pred             ------cEEEEeccc
Confidence                  899999884

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.49  E-value=2.9e-12  Score=101.79  Aligned_cols=107  Identities=25%  Similarity=0.415  Sum_probs=87.8

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----   89 (148)
                      .++.|.+ ..+.++++|+.|+.|++||++... ..+..+.+|...|..+.|. ++..+++++.|+++++||++..     
T Consensus       621 ~~v~~~~-~~g~~latgs~dg~I~iwD~~~~~-~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~~~~~~~~  697 (793)
T PLN00181        621 CCVQFPS-ESGRSLAFGSADHKVYYYDLRNPK-LPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSISGIN  697 (793)
T ss_pred             EEEEEeC-CCCCEEEEEeCCCeEEEEECCCCC-ccceEecCCCCCEEEEEEe-CCCEEEEEECCCEEEEEeCCCCccccC
Confidence            3455543 238899999999999999998761 2566778899999999997 7889999999999999999742     


Q ss_pred             ------cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 ------FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 ------~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                            +.   ..+..+.|+|++++|++++.|+      .|++|+...+.
T Consensus       698 ~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~------~v~iw~~~~~~  741 (793)
T PLN00181        698 ETPLHSFMGHTNVKNFVGLSVSDGYIATGSETN------EVFVYHKAFPM  741 (793)
T ss_pred             CcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCC------EEEEEECCCCC
Confidence                  22   5578899999999999999988      99999976554

>KOG4283|consensus

Probab=99.49  E-value=2.8e-13  Score=93.52  Aligned_cols=98  Identities=26%  Similarity=0.357  Sum_probs=85.1

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCE-EEEEeCCCcEEEEECCcc--------------
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKW-MFTGGEDCRARIWDLSLC--------------   89 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~-l~~~~~~~~i~l~d~~~~--------------   89 (148)
                      .-++|+|..+-.|++.|+.++  ....++++|...|.++.|||...+ |++|+.||.+++||++.-              
T Consensus       158 HcLiA~gtr~~~VrLCDi~SG--s~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~  235 (397)
T KOG4283|consen  158 HCLIAAGTRDVQVRLCDIASG--SFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKR  235 (397)
T ss_pred             ceEEEEecCCCcEEEEeccCC--cceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCcc
Confidence            346778778889999999999  899999999999999999998775 588999999999999864              


Q ss_pred             ---cc------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 ---FI------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 ---~~------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                         ++      +.++.++|+.++.++++.+.|.      ++++|+..+.+
T Consensus       236 ~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~------r~r~wn~~~G~  279 (397)
T KOG4283|consen  236 PPILKTNTAHYGKVNGLAWTSDARYLASCGTDD------RIRVWNMESGR  279 (397)
T ss_pred             CccccccccccceeeeeeecccchhhhhccCcc------ceEEeecccCc
Confidence               11      6788999999999999999977      89999977654

>KOG1034|consensus

Probab=99.49  E-value=2.2e-13  Score=94.97  Aligned_cols=103  Identities=21%  Similarity=0.271  Sum_probs=90.3

Q ss_pred             eCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccC-CCEEEEEeCCCcEEEEECCcc-----cc--
Q psy7062          20 DSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQED-GKWMFTGGEDCRARIWDLSLC-----FI--   91 (148)
Q Consensus        20 ~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~-~~~l~~~~~~~~i~l~d~~~~-----~~--   91 (148)
                      +......++|+++.-|.|++.|+.+.  +....+.+|...|..+.++|+ .++++++|.|..+++|++++.     |.  
T Consensus       100 d~~~~~p~la~~G~~GvIrVid~~~~--~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~  177 (385)
T KOG1034|consen  100 DSNTGNPFLAAGGYLGVIRVIDVVSG--QCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGV  177 (385)
T ss_pred             cCCCCCeeEEeecceeEEEEEecchh--hhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEeccc
Confidence            34434678888888899999999988  888899999999999999995 579999999999999999998     22  


Q ss_pred             ----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          92 ----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        92 ----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                          ..+.++.|++++.++++++.|-      ++++|++..++
T Consensus       178 egHrdeVLSvD~~~~gd~i~ScGmDh------slk~W~l~~~~  214 (385)
T KOG1034|consen  178 EGHRDEVLSVDFSLDGDRIASCGMDH------SLKLWRLNVKE  214 (385)
T ss_pred             ccccCcEEEEEEcCCCCeeeccCCcc------eEEEEecChhH
Confidence                7799999999999999999988      99999998544

>KOG1332|consensus

Probab=99.49  E-value=4.7e-13  Score=90.13  Aligned_cols=103  Identities=18%  Similarity=0.190  Sum_probs=87.0

Q ss_pred             CCCCccEEEEEecCCeEEEEeCCCCCC-CceEEecCCCCCEEEEEEcc--CCCEEEEEeCCCcEEEEECCcc-------c
Q psy7062          21 SKHLVEMVAALGGYQHIRMYDFGSNNP-NPVINCEGVSKNVVEVGFQE--DGKWMFTGGEDCRARIWDLSLC-------F   90 (148)
Q Consensus        21 ~~~~~~~l~~~~~d~~v~~~d~~~~~~-~~~~~~~~~~~~i~~~~~sp--~~~~l~~~~~~~~i~l~d~~~~-------~   90 (148)
                      -+-.|..|++++.|++|++|.++.... ..+.++.+|.+.+..++|..  -|.+|++++.|+.+.+|.-..+       +
T Consensus        19 lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~~e~   98 (299)
T KOG1332|consen   19 LDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKAYEH   98 (299)
T ss_pred             hhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhhhhh
Confidence            344589999999999999999987643 56789999999999999964  7999999999999999999887       1


Q ss_pred             c---ccceEEEEccC--CCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          91 I---QQVNALRITPD--KQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        91 ~---~~i~~~~~sp~--~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                      .   ..+++++|.|.  |-.|++++.||      .|.+.+.+..
T Consensus        99 ~~h~~SVNsV~wapheygl~LacasSDG------~vsvl~~~~~  136 (299)
T KOG1332|consen   99 AAHSASVNSVAWAPHEYGLLLACASSDG------KVSVLTYDSS  136 (299)
T ss_pred             hhhcccceeecccccccceEEEEeeCCC------cEEEEEEcCC
Confidence            1   88999999984  56899999999      7777766544

>KOG2110|consensus

Probab=99.47  E-value=2.5e-12  Score=90.81  Aligned_cols=107  Identities=18%  Similarity=0.259  Sum_probs=92.0

Q ss_pred             EEEEEeCCCCccEEEEEe--cCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCc-EEEEECCcc--
Q psy7062          15 ISTVFDSKHLVEMVAALG--GYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCR-ARIWDLSLC--   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~--~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~-i~l~d~~~~--   89 (148)
                      ..+|++++..+.+|+.-+  ..|.|.+||..+-  ++...+..|.+.+.+++|+++|.++++++..|+ ||+|.+.++  
T Consensus       131 gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl--~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~k  208 (391)
T KOG2110|consen  131 GLCALSPNNANCYLAYPGSTTSGDVVLFDTINL--QPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQK  208 (391)
T ss_pred             ceEeeccCCCCceEEecCCCCCceEEEEEcccc--eeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccE
Confidence            467888887777888733  2358999999988  889999999999999999999999999999986 779999888  


Q ss_pred             ---cc-----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          90 ---FI-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        90 ---~~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                         |.     ..|.+++|+|++++|.+++..+      +|+++.+...
T Consensus       209 l~eFRRG~~~~~IySL~Fs~ds~~L~~sS~Te------TVHiFKL~~~  250 (391)
T KOG2110|consen  209 LYEFRRGTYPVSIYSLSFSPDSQFLAASSNTE------TVHIFKLEKV  250 (391)
T ss_pred             eeeeeCCceeeEEEEEEECCCCCeEEEecCCC------eEEEEEeccc
Confidence               33     7899999999999999999866      9999987643

>KOG0313|consensus

Probab=99.47  E-value=1.1e-12  Score=92.82  Aligned_cols=104  Identities=14%  Similarity=0.275  Sum_probs=88.0

Q ss_pred             eCCCCccEEEEEecCCeEEEEeCCCC-----------------------CCCceEEecCCCCCEEEEEEccCCCEEEEEe
Q psy7062          20 DSKHLVEMVAALGGYQHIRMYDFGSN-----------------------NPNPVINCEGVSKNVVEVGFQEDGKWMFTGG   76 (148)
Q Consensus        20 ~~~~~~~~l~~~~~d~~v~~~d~~~~-----------------------~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~   76 (148)
                      +...++..+++|+.|.++++|+...-                       ...++.++.+|+..|.++.|++ ...+++++
T Consensus       200 sv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d-~~v~yS~S  278 (423)
T KOG0313|consen  200 SVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD-ATVIYSVS  278 (423)
T ss_pred             EecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcC-CCceEeec
Confidence            33444999999999999999993210                       0135677889999999999998 77899999


Q ss_pred             CCCcEEEEECCcc-----cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          77 EDCRARIWDLSLC-----FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        77 ~~~~i~l~d~~~~-----~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                      +|++|+.||+.++     +.  ..+.++.++|..++|++|+.|.      .+++||.+++.
T Consensus       279 wDHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~gssdr------~irl~DPR~~~  333 (423)
T KOG0313|consen  279 WDHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLASGSSDR------HIRLWDPRTGD  333 (423)
T ss_pred             ccceEEEEEeecccceeeeecCcceeEeecccccceeeecCCCC------ceeecCCCCCC
Confidence            9999999999988     22  7799999999999999999988      99999999875

>KOG1007|consensus

Probab=99.47  E-value=5.4e-13  Score=91.80  Aligned_cols=104  Identities=23%  Similarity=0.319  Sum_probs=86.9

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEe-cCCCCCEEEEEEccCCC-EEEEEeCCCcEEEEECCcc---
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINC-EGVSKNVVEVGFQEDGK-WMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~-~~~~~~i~~~~~sp~~~-~l~~~~~~~~i~l~d~~~~---   89 (148)
                      ..-+|+|.+++..+++ ..|+++..||+++.  .....+ .+|...+..++|+|+.. ++++|+.|+.+++||.++.   
T Consensus       174 tsg~WspHHdgnqv~t-t~d~tl~~~D~RT~--~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~p  250 (370)
T KOG1007|consen  174 TSGAWSPHHDGNQVAT-TSDSTLQFWDLRTM--KKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFP  250 (370)
T ss_pred             cccccCCCCccceEEE-eCCCcEEEEEccch--hhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCcc
Confidence            4567889889999999 78999999999987  555554 46889999999999876 6788999999999999987   


Q ss_pred             ---cc---ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeecC
Q psy7062          90 ---FI---QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        90 ---~~---~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                         +.   .+++++.|+| ..+++++++.|.      .|.+|...
T Consensus       251 v~el~~HsHWvW~VRfn~~hdqLiLs~~SDs------~V~Lsca~  289 (370)
T KOG1007|consen  251 VQELPGHSHWVWAVRFNPEHDQLILSGGSDS------AVNLSCAS  289 (370)
T ss_pred             ccccCCCceEEEEEEecCccceEEEecCCCc------eeEEEecc
Confidence               22   8999999999 567888888877      78888744

>KOG0300|consensus

Probab=99.47  E-value=4.1e-13  Score=93.64  Aligned_cols=114  Identities=14%  Similarity=0.196  Sum_probs=95.1

Q ss_pred             eeecCcEEE--EEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEEC
Q psy7062           9 LTAFGQIST--VFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL   86 (148)
Q Consensus         9 ~~~~~~~~~--~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~   86 (148)
                      +++.+|..+  +.+.-..++.+++++-|.+..+||++++  +.+..+.+|....+.++-+|..+++++.+.|-+.++||+
T Consensus       266 ~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtg--e~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDF  343 (481)
T KOG0300|consen  266 MRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETG--EVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDF  343 (481)
T ss_pred             eeeeccccceEehhhhcCcceeeeeeccccceeeeeccC--ceeccccCcchhccccccCCcceEEEEeccCceeEeccc
Confidence            344454433  3344445899999999999999999999  999999999999999999999999999999999999999


Q ss_pred             Ccc------cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          87 SLC------FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        87 ~~~------~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                      +..      |+   ..+.++.|.-+.+ +++++.|.      +|++||+++...
T Consensus       344 ReaI~sV~VFQGHtdtVTS~vF~~dd~-vVSgSDDr------TvKvWdLrNMRs  390 (481)
T KOG0300|consen  344 REAIQSVAVFQGHTDTVTSVVFNTDDR-VVSGSDDR------TVKVWDLRNMRS  390 (481)
T ss_pred             hhhcceeeeecccccceeEEEEecCCc-eeecCCCc------eEEEeeeccccC
Confidence            865      55   6788888877665 68999988      999999987653

>KOG0268|consensus

Probab=99.47  E-value=1.3e-13  Score=97.10  Aligned_cols=105  Identities=16%  Similarity=0.259  Sum_probs=94.3

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      .+.++|+|.  +..+++|++|..+-.||++.. ..++....+|.+.|..++|||-|+-+++|+.|.+|++|..+.+    
T Consensus       232 TN~IswnPe--afnF~~a~ED~nlY~~DmR~l-~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRd  308 (433)
T KOG0268|consen  232 TNTICWNPE--AFNFVAANEDHNLYTYDMRNL-SRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRD  308 (433)
T ss_pred             ccceecCcc--ccceeeccccccceehhhhhh-cccchhhcccceeEEEeccCCCcchhccccccceEEEeecCCCcchh
Confidence            467889994  788899899999999999876 3678888899999999999999999999999999999999877    


Q ss_pred             -c-c---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          90 -F-I---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        90 -~-~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                       + .   +.+.|+.||-|.+++++|+.|+      .|++|.-.
T Consensus       309 iYhtkRMq~V~~Vk~S~Dskyi~SGSdd~------nvRlWka~  345 (433)
T KOG0268|consen  309 IYHTKRMQHVFCVKYSMDSKYIISGSDDG------NVRLWKAK  345 (433)
T ss_pred             hhhHhhhheeeEEEEeccccEEEecCCCc------ceeeeecc
Confidence             2 2   8899999999999999999988      89999854

>KOG0278|consensus

Probab=99.47  E-value=2.1e-13  Score=92.17  Aligned_cols=109  Identities=17%  Similarity=0.303  Sum_probs=92.6

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----   89 (148)
                      ..++|+.+  .++|++|+.+.-+|+||++... .+...+.+|+..|..+-|+...+.+++...|+++|+||.+++     
T Consensus       104 k~~af~~d--s~~lltgg~ekllrvfdln~p~-App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~s  180 (334)
T KOG0278|consen  104 KAVAFSQD--SNYLLTGGQEKLLRVFDLNRPK-APPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQS  180 (334)
T ss_pred             eeEEeccc--chhhhccchHHHhhhhhccCCC-CCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEE
Confidence            56777777  7899999999999999998762 566788899999999999999999999999999999999998     


Q ss_pred             cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCccee
Q psy7062          90 FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVV  133 (148)
Q Consensus        90 ~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~  133 (148)
                      +.  .++.++.++++|++|..+-.       ..|.+||..+.....
T Consensus       181 L~~~s~VtSlEvs~dG~ilTia~g-------ssV~Fwdaksf~~lK  219 (334)
T KOG0278|consen  181 LEFNSPVTSLEVSQDGRILTIAYG-------SSVKFWDAKSFGLLK  219 (334)
T ss_pred             EecCCCCcceeeccCCCEEEEecC-------ceeEEecccccccee
Confidence            32  99999999999998877642       269999977655443

>KOG4378|consensus

Probab=99.46  E-value=7.4e-13  Score=96.83  Aligned_cols=123  Identities=14%  Similarity=0.216  Sum_probs=101.6

Q ss_pred             EEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceE-EecCCCCCEEEEEEccC-CCEEEEEeCCCcEEEEECCcc----
Q psy7062          16 STVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVI-NCEGVSKNVVEVGFQED-GKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        16 ~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~-~~~~~~~~i~~~~~sp~-~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      -+.|++.. ..+|.+++++|.|.+||+...  .++. ..+.|.....+++|||. ...+++.+.|..|.+||+++.    
T Consensus       169 ll~ys~sk-r~lL~~asd~G~VtlwDv~g~--sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~  245 (673)
T KOG4378|consen  169 LLRYSPSK-RFLLSIASDKGAVTLWDVQGM--SPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTD  245 (673)
T ss_pred             Eeeccccc-ceeeEeeccCCeEEEEeccCC--CcccchhhhccCCcCcceecCCccceEEEecccceEEEeecccccccc
Confidence            46677653 678888899999999999987  5554 44569999999999994 567899999999999999887    


Q ss_pred             -cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccCcccCcceeecc
Q psy7062          90 -FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTLVKPQVTRAK  147 (148)
Q Consensus        90 -~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~  147 (148)
                       +.  .+...++|+++|.+|+.|+..|      .|..||++....+......+.-.++|+.
T Consensus       246 ~l~y~~Plstvaf~~~G~~L~aG~s~G------~~i~YD~R~~k~Pv~v~sah~~sVt~va  300 (673)
T KOG4378|consen  246 RLTYSHPLSTVAFSECGTYLCAGNSKG------ELIAYDMRSTKAPVAVRSAHDASVTRVA  300 (673)
T ss_pred             eeeecCCcceeeecCCceEEEeecCCc------eEEEEecccCCCCceEeeecccceeEEE
Confidence             33  8999999999999999999877      9999999988877776666666666653

>KOG0308|consensus

Probab=99.46  E-value=1.3e-12  Score=97.80  Aligned_cols=108  Identities=19%  Similarity=0.320  Sum_probs=94.1

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----   89 (148)
                      ...+++-+..+.++++|+.++.+++||.++.  +.+..+.+|+..|..+-.++||..+++++.||+|++||+...     
T Consensus       173 siYSLA~N~t~t~ivsGgtek~lr~wDprt~--~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T  250 (735)
T KOG0308|consen  173 SIYSLAMNQTGTIIVSGGTEKDLRLWDPRTC--KKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLAT  250 (735)
T ss_pred             ceeeeecCCcceEEEecCcccceEEeccccc--cceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeee
Confidence            3445555555889999999999999999998  888889999999999999999999999999999999999876     


Q ss_pred             cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 ~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                      +.   ..+|++..+|+-.++.+|++|+      .|..-|++++.
T Consensus       251 ~~vH~e~VWaL~~~~sf~~vYsG~rd~------~i~~Tdl~n~~  288 (735)
T KOG0308|consen  251 YIVHKEGVWALQSSPSFTHVYSGGRDG------NIYRTDLRNPA  288 (735)
T ss_pred             EEeccCceEEEeeCCCcceEEecCCCC------cEEecccCCch
Confidence            22   6699999999999999999988      77777777653

>KOG0294|consensus

Probab=99.46  E-value=1.6e-12  Score=90.32  Aligned_cols=105  Identities=14%  Similarity=0.190  Sum_probs=88.9

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..++.|.++.+...|.+|++||.|.+|+....  ..+.++++|...|+.++.+|.++..++.+.|+.+++||+-.+    
T Consensus        86 itaL~F~~~~S~shLlS~sdDG~i~iw~~~~W--~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~  163 (362)
T KOG0294|consen   86 ITALKFYPPLSKSHLLSGSDDGHIIIWRVGSW--ELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAF  163 (362)
T ss_pred             eEEEEecCCcchhheeeecCCCcEEEEEcCCe--EEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccce
Confidence            57888887766667888899999999999988  899999999999999999999999999999999999999776    


Q ss_pred             ---ccccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          90 ---FIQQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        90 ---~~~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                         +......+.|+|.|.+++.+..++       |-+|.+.
T Consensus       164 v~~L~~~at~v~w~~~Gd~F~v~~~~~-------i~i~q~d  197 (362)
T KOG0294|consen  164 VLNLKNKATLVSWSPQGDHFVVSGRNK-------IDIYQLD  197 (362)
T ss_pred             eeccCCcceeeEEcCCCCEEEEEeccE-------EEEEecc
Confidence               225566689999998877777644       6666544

>KOG0771|consensus

Probab=99.45  E-value=1e-12  Score=93.76  Aligned_cols=121  Identities=21%  Similarity=0.312  Sum_probs=100.2

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..+++|.++  |..+++++.||++|+|+..+.  ..+.....|...|.++.|+|||+.+++-+.| ..++|+.+++    
T Consensus       147 ~k~vaf~~~--gs~latgg~dg~lRv~~~Ps~--~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a  221 (398)
T KOG0771|consen  147 QKVVAFNGD--GSKLATGGTDGTLRVWEWPSM--LTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALA  221 (398)
T ss_pred             ceEEEEcCC--CCEeeeccccceEEEEecCcc--hhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhh
Confidence            467777777  899999999999999998877  6777777899999999999999999999988 8999998765    


Q ss_pred             ---------------c-----------------------------------c--------ccceEEEEccCCCEEEEEec
Q psy7062          90 ---------------F-----------------------------------I--------QQVNALRITPDKQLLASAEE  111 (148)
Q Consensus        90 ---------------~-----------------------------------~--------~~i~~~~~sp~~~~l~~~~~  111 (148)
                                     |                                   +        ..|.+++.+++|++++.|+.
T Consensus       222 ~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~  301 (398)
T KOG0771|consen  222 RKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTM  301 (398)
T ss_pred             hcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEecc
Confidence                           0                                   0        25778899999999999999


Q ss_pred             CCceecCeeEEEeecCCCcceeccCcccCcceee
Q psy7062         112 LSCCYCGAAVFVYNSCYPAAVVASNTLVKPQVTR  145 (148)
Q Consensus       112 d~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~  145 (148)
                      ||      .|.+++....+..+...+.+.-.+|.
T Consensus       302 dG------sVai~~~~~lq~~~~vk~aH~~~VT~  329 (398)
T KOG0771|consen  302 DG------SVAIYDAKSLQRLQYVKEAHLGFVTG  329 (398)
T ss_pred             CC------cEEEEEeceeeeeEeehhhheeeeee
Confidence            88      89999988777766665555544443

>KOG1188|consensus

Probab=99.45  E-value=1.3e-12  Score=91.51  Aligned_cols=119  Identities=18%  Similarity=0.249  Sum_probs=97.3

Q ss_pred             cEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEcc--CCCEEEEEeCCCcEEEEECCcc-------cc----c
Q psy7062          26 EMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQE--DGKWMFTGGEDCRARIWDLSLC-------FI----Q   92 (148)
Q Consensus        26 ~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp--~~~~l~~~~~~~~i~l~d~~~~-------~~----~   92 (148)
                      ..+|++...++|++||..++  +.+..+++++..+..+.|..  .+..+.+++.||+|++||+++.       +.    .
T Consensus        41 ~~vav~lSngsv~lyd~~tg--~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~  118 (376)
T KOG1188|consen   41 TAVAVSLSNGSVRLYDKGTG--QLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGT  118 (376)
T ss_pred             eeEEEEecCCeEEEEeccch--hhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCC
Confidence            44677788999999999998  88999999999999999877  5678999999999999999987       22    3


Q ss_pred             cceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc-eeccCcccCcceeeccC
Q psy7062          93 QVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA-VVASNTLVKPQVTRAKE  148 (148)
Q Consensus        93 ~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~  148 (148)
                      +..+++....++.+++|..  .......|.+||+|..+. ...+.+-+.-++|+.+|
T Consensus       119 ~f~~ld~nck~~ii~~GtE--~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrF  173 (376)
T KOG1188|consen  119 PFICLDLNCKKNIIACGTE--LTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRF  173 (376)
T ss_pred             cceEeeccCcCCeEEeccc--cccCceEEEEEEeccccchhhhhhhhccCcceeEEe
Confidence            5566666667788888765  445667899999998876 78888888888887764

>KOG0641|consensus

Probab=99.44  E-value=3.9e-12  Score=85.20  Aligned_cols=105  Identities=19%  Similarity=0.296  Sum_probs=89.4

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecC-------CCCCEEEEEEccCCCEEEEEeCCCcEEEEE
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEG-------VSKNVVEVGFQEDGKWMFTGGEDCRARIWD   85 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~-------~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d   85 (148)
                      ++.-..|+.+  +-++++|+.|.+|+.||++..  ..+.++..       ..+.|..+++.|.|+.+++|-.|....+||
T Consensus       184 ghilalyswn--~~m~~sgsqdktirfwdlrv~--~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lyd  259 (350)
T KOG0641|consen  184 GHILALYSWN--GAMFASGSQDKTIRFWDLRVN--SCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYD  259 (350)
T ss_pred             ccEEEEEEec--CcEEEccCCCceEEEEeeecc--ceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEE
Confidence            3444555666  899999999999999999987  67776643       236799999999999999999999999999


Q ss_pred             CCcc-----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          86 LSLC-----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        86 ~~~~-----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                      ++.+     |.   ..|+++.|+|...++++++-|-      +|++-|+.
T Consensus       260 irg~r~iq~f~phsadir~vrfsp~a~yllt~syd~------~ikltdlq  303 (350)
T KOG0641|consen  260 IRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDM------KIKLTDLQ  303 (350)
T ss_pred             eeCCceeeeeCCCccceeEEEeCCCceEEEEecccc------eEEEeecc
Confidence            9987     32   8899999999999999999877      89999977

>KOG0308|consensus

Probab=99.44  E-value=1.9e-12  Score=97.06  Aligned_cols=112  Identities=19%  Similarity=0.342  Sum_probs=92.5

Q ss_pred             EEEEE-eCCCCccEEEEEecCCeEEEEeCCCCCCCc--------eEEec-CCCCCEEEEEEccCCCEEEEEeCCCcEEEE
Q psy7062          15 ISTVF-DSKHLVEMVAALGGYQHIRMYDFGSNNPNP--------VINCE-GVSKNVVEVGFQEDGKWMFTGGEDCRARIW   84 (148)
Q Consensus        15 ~~~~~-~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~--------~~~~~-~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~   84 (148)
                      .++++ ..+  ..++|+|+-|+.|.+||++++....        ...+. ++...|++++-++.|..+++|+.++.+++|
T Consensus       121 kcla~~ak~--~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~w  198 (735)
T KOG0308|consen  121 KCLAYIAKN--NELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLW  198 (735)
T ss_pred             eeeeecccC--ceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccceEEe
Confidence            56666 444  8999999999999999999762111        11222 677889999999999999999999999999


Q ss_pred             ECCcc-----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceec
Q psy7062          85 DLSLC-----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVA  134 (148)
Q Consensus        85 d~~~~-----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~  134 (148)
                      |.++.     +.   ..+..+..++||..+++++.||      +|++||+.......+
T Consensus       199 Dprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDg------tIrlWdLgqQrCl~T  250 (735)
T KOG0308|consen  199 DPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDG------TIRLWDLGQQRCLAT  250 (735)
T ss_pred             ccccccceeeeeccccceEEEEEcCCCCeEeecCCCc------eEEeeeccccceeee
Confidence            99987     43   8899999999999999999999      999999986655443

>KOG0306|consensus

Probab=99.43  E-value=1.3e-12  Score=99.31  Aligned_cols=106  Identities=13%  Similarity=0.231  Sum_probs=94.3

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----   89 (148)
                      +..+.|.+.++.++++||.|..|++|-++-+  .+-..+.+|...|.++.|.|+...+.+++.|+.++-||-...     
T Consensus       552 PV~smDIS~DSklivTgSADKnVKiWGLdFG--DCHKS~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~  629 (888)
T KOG0306|consen  552 PVLSMDISPDSKLIVTGSADKNVKIWGLDFG--DCHKSFFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEKFEEIQK  629 (888)
T ss_pred             ceeEEeccCCcCeEEeccCCCceEEeccccc--hhhhhhhcccCceeEEEEcccceeEEEecCcceEEeechhhhhhhee
Confidence            4555555555999999999999999999988  888999999999999999999999999999999999999887     


Q ss_pred             cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062          90 FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        90 ~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                      +.   ..++|++.+|+|.++++++.|.      .|++|.-..
T Consensus       630 L~~H~~ev~cLav~~~G~~vvs~shD~------sIRlwE~td  665 (888)
T KOG0306|consen  630 LDGHHSEVWCLAVSPNGSFVVSSSHDK------SIRLWERTD  665 (888)
T ss_pred             eccchheeeeeEEcCCCCeEEeccCCc------eeEeeeccC
Confidence            22   8899999999999999999988      899997543

>KOG1445|consensus

Probab=99.43  E-value=4.3e-13  Score=100.68  Aligned_cols=119  Identities=15%  Similarity=0.171  Sum_probs=95.8

Q ss_pred             cceeeecC--cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEE
Q psy7062           6 GGILTAFG--QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARI   83 (148)
Q Consensus         6 ~~~~~~~~--~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l   83 (148)
                      .+++++++  ...+.|+|- ..++|++++.|.+|++||+.+.  .....+.+|+..|.+++|||+|+.+++.++||++++
T Consensus       670 e~~lt~h~eKI~slRfHPL-AadvLa~asyd~Ti~lWDl~~~--~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rV  746 (1012)
T KOG1445|consen  670 EKILTIHGEKITSLRFHPL-AADVLAVASYDSTIELWDLANA--KLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRV  746 (1012)
T ss_pred             ceeeecccceEEEEEecch-hhhHhhhhhccceeeeeehhhh--hhhheeccCcCceeEEEECCCCcceeeeecCceEEE
Confidence            34566665  345666764 3788899999999999999998  777788999999999999999999999999999999


Q ss_pred             EECCcc---c-c------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          84 WDLSLC---F-I------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        84 ~d~~~~---~-~------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                      |.-+++   + +      .+-..+.|..+|+++++.+.|..-  ..+|.+||..+.
T Consensus       747 y~Prs~e~pv~Eg~gpvgtRgARi~wacdgr~viv~Gfdk~S--eRQv~~Y~Aq~l  800 (1012)
T KOG1445|consen  747 YEPRSREQPVYEGKGPVGTRGARILWACDGRIVIVVGFDKSS--ERQVQMYDAQTL  800 (1012)
T ss_pred             eCCCCCCCccccCCCCccCcceeEEEEecCcEEEEecccccc--hhhhhhhhhhhc
Confidence            999887   2 2      556678899999999998877632  235777775543

>KOG0292|consensus

Probab=99.42  E-value=1.3e-12  Score=101.02  Aligned_cols=111  Identities=14%  Similarity=0.243  Sum_probs=98.1

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---c
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---F   90 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---~   90 (148)
                      ...++|+|.  ..-+.++-..|.|.+||.+=+  ..+..|..|.+.|.+++|+|.+-.+++|+.|.+|++|+.+..   |
T Consensus        12 vKglsFHP~--rPwILtslHsG~IQlWDYRM~--tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrclf   87 (1202)
T KOG0292|consen   12 VKGLSFHPK--RPWILTSLHSGVIQLWDYRMG--TLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLF   87 (1202)
T ss_pred             ccceecCCC--CCEEEEeecCceeeeehhhhh--hHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccceehh
Confidence            356889987  556666578899999999977  888999999999999999999999999999999999999887   3


Q ss_pred             c-----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceec
Q psy7062          91 I-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVA  134 (148)
Q Consensus        91 ~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~  134 (148)
                      .     ..|+.+.||+...+++++|+|.      +|++|+..+.+.+..
T Consensus        88 tL~GHlDYVRt~~FHheyPWIlSASDDQ------TIrIWNwqsr~~iav  130 (1202)
T KOG0292|consen   88 TLLGHLDYVRTVFFHHEYPWILSASDDQ------TIRIWNWQSRKCIAV  130 (1202)
T ss_pred             hhccccceeEEeeccCCCceEEEccCCC------eEEEEeccCCceEEE
Confidence            3     8899999999999999999988      999999988776543

>KOG0302|consensus

Probab=99.42  E-value=9e-13  Score=93.36  Aligned_cols=125  Identities=15%  Similarity=0.142  Sum_probs=92.3

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCc-eEEecCCCCCEEEEEEccCC-CEEEEEeCCCcEEEEECCcc---
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNP-VINCEGVSKNVVEVGFQEDG-KWMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~-~~~~~~~~~~i~~~~~sp~~-~~l~~~~~~~~i~l~d~~~~---   89 (148)
                      .+++|+|...| .|++|.--+.|++|...++.... ...+.+|+..|..++|||.. ..+++|+.|+.|++||+++.   
T Consensus       215 y~LdWSp~~~g-~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~  293 (440)
T KOG0302|consen  215 YGLDWSPIKTG-RLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKK  293 (440)
T ss_pred             eeeeccccccc-ccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCcc
Confidence            46666775433 35665666789999998863221 24566799999999999955 58899999999999999987   


Q ss_pred             ---cc----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc--eeccCcccCcceeec
Q psy7062          90 ---FI----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA--VVASNTLVKPQVTRA  146 (148)
Q Consensus        90 ---~~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~--~~~~~~~~~~~~~~~  146 (148)
                         +.    +.++.+.|+.+..+|++|+.||      ++.+||++.-+.  ++..-..++..++.+
T Consensus       294 ~~~~~kAh~sDVNVISWnr~~~lLasG~DdG------t~~iwDLR~~~~~~pVA~fk~Hk~pItsi  353 (440)
T KOG0302|consen  294 AAVSTKAHNSDVNVISWNRREPLLASGGDDG------TLSIWDLRQFKSGQPVATFKYHKAPITSI  353 (440)
T ss_pred             ceeEeeccCCceeeEEccCCcceeeecCCCc------eEEEEEhhhccCCCcceeEEeccCCeeEE
Confidence               21    7799999999888999999988      999999996542  333333444444443

>KOG0303|consensus

Probab=99.41  E-value=1.8e-12  Score=92.38  Aligned_cols=114  Identities=11%  Similarity=0.158  Sum_probs=90.7

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--cc-
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--FI-   91 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--~~-   91 (148)
                      ..++|+|.- .+.|++++.|.+|.+||+.++  +.+.++. |...|++++|+.||..+++.+.|..|++||.+.+  .. 
T Consensus       135 g~V~wHPtA-~NVLlsag~Dn~v~iWnv~tg--eali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e  210 (472)
T KOG0303|consen  135 GLVQWHPTA-PNVLLSAGSDNTVSIWNVGTG--EALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSE  210 (472)
T ss_pred             EEEeecccc-hhhHhhccCCceEEEEeccCC--ceeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeee
Confidence            467788764 677888899999999999999  8888877 9999999999999999999999999999999998  11 


Q ss_pred             ------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          92 ------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        92 ------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                            .+...+.|-.++. +++.+..  ..+..++.+||..+.+.+...
T Consensus       211 ~~~heG~k~~Raifl~~g~-i~tTGfs--r~seRq~aLwdp~nl~eP~~~  257 (472)
T KOG0303|consen  211 GVAHEGAKPARAIFLASGK-IFTTGFS--RMSERQIALWDPNNLEEPIAL  257 (472)
T ss_pred             cccccCCCcceeEEeccCc-eeeeccc--cccccceeccCcccccCccee
Confidence                  5556677777888 4554442  234457999998877655433

>KOG0267|consensus

Probab=99.41  E-value=5.5e-13  Score=100.86  Aligned_cols=109  Identities=23%  Similarity=0.364  Sum_probs=96.7

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----   89 (148)
                      ..+.|+|-  +.+.++|+.|..+++||.+-.  .+...+.+|...+..+.|+|+|+++++++.|.++++||+..+     
T Consensus       116 ~sv~f~P~--~~~~a~gStdtd~~iwD~Rk~--Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~e  191 (825)
T KOG0267|consen  116 TSVDFHPY--GEFFASGSTDTDLKIWDIRKK--GCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKE  191 (825)
T ss_pred             ceeeeccc--eEEeccccccccceehhhhcc--CceeeecCCcceeEEEeecCCCceeeccCCcceeeeecccccccccc
Confidence            45556776  999999999999999999966  688999999999999999999999999999999999999877     


Q ss_pred             cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCccee
Q psy7062          90 FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVV  133 (148)
Q Consensus        90 ~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~  133 (148)
                      |.   .++..+.|+|..-.++.|+.|+      +++|||+++-..+.
T Consensus       192 f~~~e~~v~sle~hp~e~Lla~Gs~d~------tv~f~dletfe~I~  232 (825)
T KOG0267|consen  192 FKSHEGKVQSLEFHPLEVLLAPGSSDR------TVRFWDLETFEVIS  232 (825)
T ss_pred             cccccccccccccCchhhhhccCCCCc------eeeeeccceeEEee
Confidence            44   8899999999999999999988      99999998655443

>KOG0641|consensus

Probab=99.41  E-value=1.2e-11  Score=82.98  Aligned_cols=104  Identities=13%  Similarity=0.142  Sum_probs=91.4

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..+++.||.  |++|++|-.|.++.+||++.+  +++..+..|+..|.++.|+|...++++++.|..|++-|++..    
T Consensus       234 vaav~vdps--grll~sg~~dssc~lydirg~--r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~e  309 (350)
T KOG0641|consen  234 VAAVAVDPS--GRLLASGHADSSCMLYDIRGG--RMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHE  309 (350)
T ss_pred             eEEEEECCC--cceeeeccCCCceEEEEeeCC--ceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccchhhc
Confidence            345666777  999999999999999999998  899999999999999999999999999999999999999765    


Q ss_pred             cc--------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          90 FI--------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        90 ~~--------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                      +.        ..+-.+.|+|+.-.+++.+.|.      ++.+|-+.
T Consensus       310 l~~~vv~ehkdk~i~~rwh~~d~sfisssadk------t~tlwa~~  349 (350)
T KOG0641|consen  310 LPIMVVAEHKDKAIQCRWHPQDFSFISSSADK------TATLWALN  349 (350)
T ss_pred             CceEEEEeccCceEEEEecCccceeeeccCcc------eEEEeccC
Confidence            21        5667789999988899999988      89999754

>KOG0278|consensus

Probab=99.40  E-value=7.6e-12  Score=84.80  Aligned_cols=97  Identities=18%  Similarity=0.299  Sum_probs=82.1

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----c-c---ccce
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----F-I---QQVN   95 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~-~---~~i~   95 (148)
                      |+++.. ...++|+.||.++-  ..+..+. -+..|.+.+++|+...++.|++|..++.||..++     + .   +++.
T Consensus       196 G~ilTi-a~gssV~Fwdaksf--~~lKs~k-~P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVh  271 (334)
T KOG0278|consen  196 GRILTI-AYGSSVKFWDAKSF--GLLKSYK-MPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVH  271 (334)
T ss_pred             CCEEEE-ecCceeEEeccccc--cceeecc-CccccccccccCCCceEEecCcceEEEEEeccCCceeeecccCCCCceE
Confidence            777666 66678888888876  6666665 5778899999999999999999999999999988     3 2   8999


Q ss_pred             EEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          96 ALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        96 ~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                      |+.|+|+|...++|+.||      +|++|.....+.
T Consensus       272 cVrFSPdGE~yAsGSEDG------TirlWQt~~~~~  301 (334)
T KOG0278|consen  272 CVRFSPDGELYASGSEDG------TIRLWQTTPGKT  301 (334)
T ss_pred             EEEECCCCceeeccCCCc------eEEEEEecCCCc
Confidence            999999999999999999      999998764443

>KOG0306|consensus

Probab=99.40  E-value=8.6e-12  Score=94.94  Aligned_cols=113  Identities=15%  Similarity=0.239  Sum_probs=99.2

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      .-++.++|+  +.+||++--|.+|++|-+++.  +..-.+.+|.-+|.++..|||++.++||+-|..+++|-+.=+    
T Consensus       511 vL~v~~Spd--gk~LaVsLLdnTVkVyflDtl--KFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHK  586 (888)
T KOG0306|consen  511 VLCVSVSPD--GKLLAVSLLDNTVKVYFLDTL--KFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHK  586 (888)
T ss_pred             EEEEEEcCC--CcEEEEEeccCeEEEEEecce--eeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhh
Confidence            457777888  999999899999999999998  788889999999999999999999999999999999987655    


Q ss_pred             --cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062          90 --FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN  136 (148)
Q Consensus        90 --~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~  136 (148)
                        |.  ..+.++.|-|....+++++.|+      .|+-||-.....++.+.
T Consensus       587 S~fAHdDSvm~V~F~P~~~~FFt~gKD~------kvKqWDg~kFe~iq~L~  631 (888)
T KOG0306|consen  587 SFFAHDDSVMSVQFLPKTHLFFTCGKDG------KVKQWDGEKFEEIQKLD  631 (888)
T ss_pred             hhhcccCceeEEEEcccceeEEEecCcc------eEEeechhhhhhheeec
Confidence              44  8899999999999999999999      99999976655554443

>KOG0288|consensus

Probab=99.40  E-value=7.7e-12  Score=89.49  Aligned_cols=102  Identities=15%  Similarity=0.178  Sum_probs=84.5

Q ss_pred             cEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----------cc--cc
Q psy7062          26 EMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----------FI--QQ   93 (148)
Q Consensus        26 ~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----------~~--~~   93 (148)
                      ..+.+|-.|++|+.||.++.  ........+. .|+++..++++.-+++++.|.++.+.|+++.          +.  ..
T Consensus       313 ~~~~SgH~DkkvRfwD~Rs~--~~~~sv~~gg-~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asD  389 (459)
T KOG0288|consen  313 SDVISGHFDKKVRFWDIRSA--DKTRSVPLGG-RVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASD  389 (459)
T ss_pred             eeeeecccccceEEEeccCC--ceeeEeecCc-ceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccc
Confidence            34556667788999998887  6777776544 8999999999999999999999999999987          22  56


Q ss_pred             ceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062          94 VNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN  136 (148)
Q Consensus        94 i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~  136 (148)
                      ...+.|||++.++++|+.||      .|++|++.+.+......
T Consensus       390 wtrvvfSpd~~YvaAGS~dg------sv~iW~v~tgKlE~~l~  426 (459)
T KOG0288|consen  390 WTRVVFSPDGSYVAAGSADG------SVYIWSVFTGKLEKVLS  426 (459)
T ss_pred             cceeEECCCCceeeeccCCC------cEEEEEccCceEEEEec
Confidence            78899999999999999999      99999998776544433

>KOG4283|consensus

Probab=99.40  E-value=4.8e-12  Score=87.51  Aligned_cols=109  Identities=15%  Similarity=0.189  Sum_probs=84.8

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCC----------Cce---EEecCCCCCEEEEEEcc-CCCEEEEEeCCC
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNP----------NPV---INCEGVSKNVVEVGFQE-DGKWMFTGGEDC   79 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~----------~~~---~~~~~~~~~i~~~~~sp-~~~~l~~~~~~~   79 (148)
                      .+.+..++.. |+++++|+.|+.+.+||++....          ..+   ....+|.-.|..+.|-| |.-++.+++.|.
T Consensus        46 vNsL~id~te-grymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFtssSFDh  124 (397)
T KOG4283|consen   46 VNSLQIDLTE-GRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTSSSFDH  124 (397)
T ss_pred             cceeeecccc-ceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeecccccc
Confidence            4566667654 99999999999999999986520          000   11234777899999999 667888899999


Q ss_pred             cEEEEECCcc-------------------------------------------------cc---ccceEEEEccCCC-EE
Q psy7062          80 RARIWDLSLC-------------------------------------------------FI---QQVNALRITPDKQ-LL  106 (148)
Q Consensus        80 ~i~l~d~~~~-------------------------------------------------~~---~~i~~~~~sp~~~-~l  106 (148)
                      ++++||.++.                                                 +.   ..+.++.|+|... .|
T Consensus       125 tlKVWDtnTlQ~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~e~vL  204 (397)
T KOG4283|consen  125 TLKVWDTNTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPSSEWVL  204 (397)
T ss_pred             eEEEeecccceeeEEeecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEeccCceeEE
Confidence            9999999875                                                 11   6788999999665 67


Q ss_pred             EEEecCCceecCeeEEEeecCCC
Q psy7062         107 ASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus       107 ~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                      ++|+.||      .|++||++..
T Consensus       205 atgsaDg------~irlWDiRra  221 (397)
T KOG4283|consen  205 ATGSADG------AIRLWDIRRA  221 (397)
T ss_pred             EecCCCc------eEEEEEeecc
Confidence            7888988      9999999854

>KOG0973|consensus

Probab=99.39  E-value=3e-12  Score=100.11  Aligned_cols=106  Identities=14%  Similarity=0.211  Sum_probs=89.6

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      +..++|+|+  +.+||+++.|++|.+||..+.  +.+..+.+|.+.|.++.|.|-|+++++-+.|+++++|++.+.    
T Consensus       132 V~Dv~Wsp~--~~~lvS~s~DnsViiwn~~tF--~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k  207 (942)
T KOG0973|consen  132 VLDVNWSPD--DSLLVSVSLDNSVIIWNAKTF--ELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEK  207 (942)
T ss_pred             cceeccCCC--ccEEEEecccceEEEEccccc--eeeeeeecccccccceEECCccCeeeeecCCceEEEEEcccceeeE
Confidence            467888886  999999999999999999998  899999999999999999999999999999999999997653    


Q ss_pred             -----cc-----ccceEEEEccCCCEEEEEecCCceecCeeEEEee
Q psy7062          90 -----FI-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYN  125 (148)
Q Consensus        90 -----~~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d  125 (148)
                           |+     ..+..+.|||||++|++...-.  ....++.+.+
T Consensus       208 ~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n--~~~~~~~Iie  251 (942)
T KOG0973|consen  208 SITKPFEESPLTTFFLRLSWSPDGHHLASPNAVN--GGKSTIAIIE  251 (942)
T ss_pred             eeccchhhCCCcceeeecccCCCcCeecchhhcc--CCcceeEEEe
Confidence                 33     6678899999999999975322  1234555554

>KOG0639|consensus

Probab=99.39  E-value=1.4e-12  Score=95.56  Aligned_cols=112  Identities=14%  Similarity=0.164  Sum_probs=92.1

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----   89 (148)
                      ..+...++  |+.|.+|++-.++.+||+..........+.......+.++.+||.+..++++.||.|.+||+++.     
T Consensus       469 RSckL~pd--grtLivGGeastlsiWDLAapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~Vrq  546 (705)
T KOG0639|consen  469 RSCKLLPD--GRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQ  546 (705)
T ss_pred             eeeEecCC--CceEEeccccceeeeeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeec
Confidence            45555666  88889989999999999988733333444434456788999999999999999999999999987     


Q ss_pred             cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceec
Q psy7062          90 FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVA  134 (148)
Q Consensus        90 ~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~  134 (148)
                      |+   ....|+..+++|..|-+|+-|.      +|+-||++....+..
T Consensus       547 fqGhtDGascIdis~dGtklWTGGlDn------tvRcWDlregrqlqq  588 (705)
T KOG0639|consen  547 FQGHTDGASCIDISKDGTKLWTGGLDN------TVRCWDLREGRQLQQ  588 (705)
T ss_pred             ccCCCCCceeEEecCCCceeecCCCcc------ceeehhhhhhhhhhh
Confidence            54   7899999999999999999988      999999997765543

>KOG1036|consensus

Probab=99.38  E-value=1.5e-11  Score=85.07  Aligned_cols=104  Identities=15%  Similarity=0.244  Sum_probs=86.5

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---   89 (148)
                      +...+.|++. .+.+|++ +-|+++++||+...  .....+ .|...+.+.+|.+ ...+++|+.||.++.+|++.+   
T Consensus        15 ~IS~v~f~~~-~~~LLvs-sWDgslrlYdv~~~--~l~~~~-~~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~~~~~   88 (323)
T KOG1036|consen   15 GISSVKFSPS-SSDLLVS-SWDGSLRLYDVPAN--SLKLKF-KHGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNTGNED   88 (323)
T ss_pred             ceeeEEEcCc-CCcEEEE-eccCcEEEEeccch--hhhhhe-ecCCceeeeeccC-CceEEEeccCceEEEEEecCCcce
Confidence            4578888844 3566666 89999999999986  444455 4899999999977 567889999999999999988   


Q ss_pred             -cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062          90 -FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        90 -~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                       +.   .++.|+.+.+....+++|+.|+      +|++||.+.
T Consensus        89 ~igth~~~i~ci~~~~~~~~vIsgsWD~------~ik~wD~R~  125 (323)
T KOG1036|consen   89 QIGTHDEGIRCIEYSYEVGCVISGSWDK------TIKFWDPRN  125 (323)
T ss_pred             eeccCCCceEEEEeeccCCeEEEcccCc------cEEEEeccc
Confidence             22   8899999999888999999988      999999985

>KOG0274|consensus

Probab=99.38  E-value=9.6e-12  Score=94.34  Aligned_cols=102  Identities=16%  Similarity=0.219  Sum_probs=88.4

Q ss_pred             CccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--c---c---ccce
Q psy7062          24 LVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--F---I---QQVN   95 (148)
Q Consensus        24 ~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--~---~---~~i~   95 (148)
                      .+.+|++|+.|.++++||..++  .....+.+|.+.+.++..  .+..+++|+.|.++++|++.++  +   .   .+|+
T Consensus       260 ~~~~lvsgS~D~t~rvWd~~sg--~C~~~l~gh~stv~~~~~--~~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~  335 (537)
T KOG0274|consen  260 GGDKLVSGSTDKTERVWDCSTG--ECTHSLQGHTSSVRCLTI--DPFLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVN  335 (537)
T ss_pred             CCCEEEEEecCCcEEeEecCCC--cEEEEecCCCceEEEEEc--cCceEeeccCCceEEEEeccCcceEEEeccccccEE
Confidence            3889999999999999999999  999999999999988755  5567788999999999999988  2   2   7888


Q ss_pred             EEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccCc
Q psy7062          96 ALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNT  137 (148)
Q Consensus        96 ~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~  137 (148)
                      ++..+  +..+++|+.|+      +|++||+.+.+......+
T Consensus       336 ~v~~~--~~~lvsgs~d~------~v~VW~~~~~~cl~sl~g  369 (537)
T KOG0274|consen  336 CVQLD--EPLLVSGSYDG------TVKVWDPRTGKCLKSLSG  369 (537)
T ss_pred             EEEec--CCEEEEEecCc------eEEEEEhhhceeeeeecC
Confidence            88885  88999999988      999999997777766655

>KOG2394|consensus

Probab=99.38  E-value=2.4e-12  Score=94.74  Aligned_cols=85  Identities=20%  Similarity=0.362  Sum_probs=74.6

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--c
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--F   90 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--~   90 (148)
                      ..+.++|+++  |++||+.+.|+.+|+||+.+.  +.+..++..-....|++|||||+++++|++|..+.+|.+...  .
T Consensus       292 ~in~f~FS~D--G~~LA~VSqDGfLRvF~fdt~--eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVV  367 (636)
T KOG2394|consen  292 SINEFAFSPD--GKYLATVSQDGFLRIFDFDTQ--ELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVV  367 (636)
T ss_pred             cccceeEcCC--CceEEEEecCceEEEeeccHH--HHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEeccceEE
Confidence            3567888886  999999999999999999998  777888878889999999999999999999999999999877  1


Q ss_pred             c------ccceEEEEcc
Q psy7062          91 I------QQVNALRITP  101 (148)
Q Consensus        91 ~------~~i~~~~~sp  101 (148)
                      .      +++..++|.|
T Consensus       368 ARGqGHkSWVs~VaFDp  384 (636)
T KOG2394|consen  368 ARGQGHKSWVSVVAFDP  384 (636)
T ss_pred             EeccccccceeeEeecc
Confidence            1      7788888874

>KOG0646|consensus

Probab=99.37  E-value=1.7e-11  Score=88.79  Aligned_cols=117  Identities=17%  Similarity=0.284  Sum_probs=95.8

Q ss_pred             cCcEEEEEeCCCCccEEEEEecCCeEEEEeCC-------CCCCCceEEecCCCCCEEEEEEccCC--CEEEEEeCCCcEE
Q psy7062          12 FGQISTVFDSKHLVEMVAALGGYQHIRMYDFG-------SNNPNPVINCEGVSKNVVEVGFQEDG--KWMFTGGEDCRAR   82 (148)
Q Consensus        12 ~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~-------~~~~~~~~~~~~~~~~i~~~~~sp~~--~~l~~~~~~~~i~   82 (148)
                      +...++.|.-+  +.++++|+.||.|.+|++-       +..++++..+..|+-.|+.+...+.|  ..+++++.|.+++
T Consensus       124 Q~ITcL~fs~d--gs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k  201 (476)
T KOG0646|consen  124 QSITCLKFSDD--GSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIK  201 (476)
T ss_pred             cceeEEEEeCC--CcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEE
Confidence            34567888777  9999999999999999873       22346788899999999999988764  4789999999999


Q ss_pred             EEECCcc--------------------------------------------------------------cc-----ccce
Q psy7062          83 IWDLSLC--------------------------------------------------------------FI-----QQVN   95 (148)
Q Consensus        83 l~d~~~~--------------------------------------------------------------~~-----~~i~   95 (148)
                      +||+..+                                                              +.     ..|.
T Consensus       202 ~wdlS~g~LLlti~fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~IT  281 (476)
T KOG0646|consen  202 LWDLSLGVLLLTITFPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAIT  281 (476)
T ss_pred             EEEeccceeeEEEecCCcceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCccee
Confidence            9999766                                                              00     3789


Q ss_pred             EEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062          96 ALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN  136 (148)
Q Consensus        96 ~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~  136 (148)
                      |++.+-||..|++|+.||      +|.+||+.+.+.+..+.
T Consensus       282 cLais~DgtlLlSGd~dg------~VcvWdi~S~Q~iRtl~  316 (476)
T KOG0646|consen  282 CLAISTDGTLLLSGDEDG------KVCVWDIYSKQCIRTLQ  316 (476)
T ss_pred             EEEEecCccEEEeeCCCC------CEEEEecchHHHHHHHh
Confidence            999999999999999999      99999987666555444

>KOG0274|consensus

Probab=99.37  E-value=2e-11  Score=92.67  Aligned_cols=100  Identities=13%  Similarity=0.168  Sum_probs=87.0

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc---ccceE
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI---QQVNA   96 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~---~~i~~   96 (148)
                      ..++++|+.|.+|++|++.++  ..+..+.+|...|.++..+  +..+++|+.|++|++||+...     +.   .++.+
T Consensus       301 ~~~~~sgs~D~tVkVW~v~n~--~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~s  376 (537)
T KOG0274|consen  301 PFLLVSGSRDNTVKVWDVTNG--ACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYS  376 (537)
T ss_pred             CceEeeccCCceEEEEeccCc--ceEEEeccccccEEEEEec--CCEEEEEecCceEEEEEhhhceeeeeecCCcceEEE
Confidence            677888899999999999988  8999998999999999886  889999999999999999987     33   88888


Q ss_pred             EEEccCCCEEEEEecCCceecCeeEEEeecCCC-cceecc
Q psy7062          97 LRITPDKQLLASAEELSCCYCGAAVFVYNSCYP-AAVVAS  135 (148)
Q Consensus        97 ~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~-~~~~~~  135 (148)
                      +.+.+. ..+++|+.|+      .|++||+++. +.+..+
T Consensus       377 l~~~~~-~~~~Sgs~D~------~IkvWdl~~~~~c~~tl  409 (537)
T KOG0274|consen  377 LIVDSE-NRLLSGSLDT------TIKVWDLRTKRKCIHTL  409 (537)
T ss_pred             EEecCc-ceEEeeeecc------ceEeecCCchhhhhhhh
Confidence            877554 8999999988      9999999988 554433

>KOG2394|consensus

Probab=99.36  E-value=2.2e-11  Score=89.83  Aligned_cols=112  Identities=20%  Similarity=0.189  Sum_probs=84.6

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCC--------------------------CceEEecCCCCCEEEEEEcc
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNP--------------------------NPVINCEGVSKNVVEVGFQE   67 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~--------------------------~~~~~~~~~~~~i~~~~~sp   67 (148)
                      ..+..|=+-..+.+|++ -.++.+.+||......                          .++..+..-...|..++|+|
T Consensus       222 vT~ikWvpg~~~~Fl~a-~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~  300 (636)
T KOG2394|consen  222 VTCIKWVPGSDSLFLVA-HASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAFSP  300 (636)
T ss_pred             eEEEEEEeCCCceEEEE-EecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEeccccccceeEcC
Confidence            45677777665666666 8888888886642110                          11111111234788999999


Q ss_pred             CCCEEEEEeCCCcEEEEECCcc-----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062          68 DGKWMFTGGEDCRARIWDLSLC-----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV  132 (148)
Q Consensus        68 ~~~~l~~~~~~~~i~l~d~~~~-----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~  132 (148)
                      ||++|++.+.||.+++||..+.     .+   +...|++|||||++|++|++|.      .|.+|.....+.+
T Consensus       301 DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDD------LVtVwSf~erRVV  367 (636)
T KOG2394|consen  301 DGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDD------LVTVWSFEERRVV  367 (636)
T ss_pred             CCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCcc------eEEEEEeccceEE
Confidence            9999999999999999999887     22   8899999999999999999988      8999998765544

>KOG1332|consensus

Probab=99.35  E-value=1.3e-11  Score=83.32  Aligned_cols=108  Identities=10%  Similarity=0.077  Sum_probs=90.0

Q ss_pred             EEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCC--CEEEEEeCCCcEEEEECCcc----
Q psy7062          16 STVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDG--KWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        16 ~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~--~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      .++|.++..|.+||+++.|+.|.+|.-.++.-........|...|++++|.|.+  -.|++++.||.|.+.+.+..    
T Consensus        61 qv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~  140 (299)
T KOG1332|consen   61 KVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWT  140 (299)
T ss_pred             EEeecccccCcEeeEeecCceEEEEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCcc
Confidence            455566667999999999999999999988555667778899999999999964  57899999999999999765    


Q ss_pred             ----cc---ccceEEEEccC---C-----------CEEEEEecCCceecCeeEEEeecCCC
Q psy7062          90 ----FI---QQVNALRITPD---K-----------QLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        90 ----~~---~~i~~~~~sp~---~-----------~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                          ..   ..+++++|.|.   |           +.|++|+.|.      .|++|+..+.
T Consensus       141 t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn------~VkiW~~~~~  195 (299)
T KOG1332|consen  141 TSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDN------LVKIWKFDSD  195 (299)
T ss_pred             chhhhhccccccceeeecCcCCCccccccCcccccceeeccCCcc------ceeeeecCCc
Confidence                11   77899999985   4           5689999877      8999998765

>KOG2055|consensus

Probab=99.35  E-value=4.1e-11  Score=86.88  Aligned_cols=78  Identities=17%  Similarity=0.264  Sum_probs=59.2

Q ss_pred             eeeecC-cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCC-CEEEEEEccCCCEEEEEeCCCcEEEEE
Q psy7062           8 ILTAFG-QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSK-NVVEVGFQEDGKWMFTGGEDCRARIWD   85 (148)
Q Consensus         8 ~~~~~~-~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~-~i~~~~~sp~~~~l~~~~~~~~i~l~d   85 (148)
                      -++..| ...+.|+.+  +..|++++.+|.|.+||+++.  ..+..+....+ .-++++.+++|.++++|+..|.+.+||
T Consensus       340 s~KieG~v~~~~fsSd--sk~l~~~~~~GeV~v~nl~~~--~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd  415 (514)
T KOG2055|consen  340 SFKIEGVVSDFTFSSD--SKELLASGGTGEVYVWNLRQN--SCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYD  415 (514)
T ss_pred             eeeeccEEeeEEEecC--CcEEEEEcCCceEEEEecCCc--ceEEEEeecCccceeeeeecCCCceEEeccCcceEEEec
Confidence            345665 456777765  566666688999999999998  77877763222 235667779999999999999999999


Q ss_pred             CCcc
Q psy7062          86 LSLC   89 (148)
Q Consensus        86 ~~~~   89 (148)
                      .++.
T Consensus       416 ~~s~  419 (514)
T KOG2055|consen  416 GNSC  419 (514)
T ss_pred             cchh
Confidence            7543

>KOG0642|consensus

Probab=99.35  E-value=1e-11  Score=91.76  Aligned_cols=111  Identities=15%  Similarity=0.292  Sum_probs=92.0

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCC------CCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEEC
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGS------NNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL   86 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~------~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~   86 (148)
                      +....+|.+.  ...|++++.++++++|++..      ...+++.+|.+|...|.++++.+++..+++|+-||+|+.|++
T Consensus       296 ~ir~l~~~~s--ep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~  373 (577)
T KOG0642|consen  296 CIRALAFHPS--EPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNL  373 (577)
T ss_pred             hhhhhhcCCC--CCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCceeeeecc
Confidence            4455566665  66788999999999999932      123578899999999999999999999999999999999977


Q ss_pred             Ccc---------------cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          87 SLC---------------FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        87 ~~~---------------~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                      ...               |.   ..+|.+++|+....|++++.||      +++.|+.....+
T Consensus       374 p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~Dg------Tvr~w~~~~~~~  430 (577)
T KOG0642|consen  374 PPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDG------TVRLWEPTEESP  430 (577)
T ss_pred             CCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCc------eEEeeccCCcCc
Confidence            532               22   7789999999999999999999      999999875554

>KOG0649|consensus

Probab=99.34  E-value=4.9e-11  Score=80.64  Aligned_cols=111  Identities=16%  Similarity=0.192  Sum_probs=85.0

Q ss_pred             eeecCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCc
Q psy7062           9 LTAFGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSL   88 (148)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~   88 (148)
                      ...+..++...+|.. +.++.+ +.|+.+..||++++  +..+.+++|+.-+-++........+++|++||++++||+++
T Consensus       112 ~evPeINam~ldP~e-nSi~~A-gGD~~~y~~dlE~G--~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt  187 (325)
T KOG0649|consen  112 VEVPEINAMWLDPSE-NSILFA-GGDGVIYQVDLEDG--RIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKT  187 (325)
T ss_pred             ccCCccceeEeccCC-CcEEEe-cCCeEEEEEEecCC--EEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccc
Confidence            345566778888875 344444 57999999999999  88999999999999988866666789999999999999998


Q ss_pred             c-----cc-------------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062          89 C-----FI-------------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV  132 (148)
Q Consensus        89 ~-----~~-------------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~  132 (148)
                      .     +.             .+|-+++  -+..++++|+.       ..+.+|+++..+..
T Consensus       188 ~k~v~~ie~yk~~~~lRp~~g~wigala--~~edWlvCGgG-------p~lslwhLrsse~t  240 (325)
T KOG0649|consen  188 QKHVSMIEPYKNPNLLRPDWGKWIGALA--VNEDWLVCGGG-------PKLSLWHLRSSEST  240 (325)
T ss_pred             cceeEEeccccChhhcCcccCceeEEEe--ccCceEEecCC-------CceeEEeccCCCce
Confidence            7     11             3344443  46778887763       36999999976654

>KOG0268|consensus

Probab=99.33  E-value=3.9e-12  Score=89.83  Aligned_cols=111  Identities=14%  Similarity=0.177  Sum_probs=92.2

Q ss_pred             ecCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-
Q psy7062          11 AFGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-   89 (148)
Q Consensus        11 ~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-   89 (148)
                      .+...++.|+|.. ..+|+++++|++|.+||+++.  .++.... -+.....|+|+|++..+.+++.|..+..||.+.. 
T Consensus       187 ~Dti~svkfNpvE-TsILas~~sDrsIvLyD~R~~--~Pl~KVi-~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~  262 (433)
T KOG0268|consen  187 ADSISSVKFNPVE-TSILASCASDRSIVLYDLRQA--SPLKKVI-LTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLS  262 (433)
T ss_pred             CCceeEEecCCCc-chheeeeccCCceEEEecccC--Cccceee-eeccccceecCccccceeeccccccceehhhhhhc
Confidence            3345778888865 678899889999999999998  6665543 3556678999998889999999999999999876 


Q ss_pred             -----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          90 -----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        90 -----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                           +.   +.+..+.|||.|+-+++|+-|.      +|++|.......
T Consensus       263 ~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDk------sIRIf~~~~~~S  306 (433)
T KOG0268|consen  263 RPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDK------SIRIFPVNHGHS  306 (433)
T ss_pred             ccchhhcccceeEEEeccCCCcchhccccccc------eEEEeecCCCcc
Confidence                 22   7899999999999999999998      999999875543

>KOG0647|consensus

Probab=99.33  E-value=4.2e-11  Score=82.88  Aligned_cols=103  Identities=17%  Similarity=0.226  Sum_probs=82.0

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCC--EEEEEeCCCcEEEEECCcc---
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGK--WMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~--~l~~~~~~~~i~l~d~~~~---   89 (148)
                      -+++|+-+  |..+++|+.|+.+++||+.++   ...++..|...|..+.|-+...  .|++||+|.+++.||.+..   
T Consensus        76 L~v~Wsdd--gskVf~g~~Dk~~k~wDL~S~---Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv  150 (347)
T KOG0647|consen   76 LDVCWSDD--GSKVFSGGCDKQAKLWDLASG---QVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPV  150 (347)
T ss_pred             EEEEEccC--CceEEeeccCCceEEEEccCC---CeeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCee
Confidence            45666666  788889899999999999997   5667778999999999987665  8999999999999999987   


Q ss_pred             ----ccccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 ----FIQQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 ----~~~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                          |..++.++..  -...++++..++      .|.+|+++++.
T Consensus       151 ~t~~LPeRvYa~Dv--~~pm~vVata~r------~i~vynL~n~~  187 (347)
T KOG0647|consen  151 ATLQLPERVYAADV--LYPMAVVATAER------HIAVYNLENPP  187 (347)
T ss_pred             eeeeccceeeehhc--cCceeEEEecCC------cEEEEEcCCCc
Confidence                2266666644  445566676666      89999997653

>KOG1036|consensus

Probab=99.33  E-value=1.1e-10  Score=80.80  Aligned_cols=104  Identities=13%  Similarity=0.213  Sum_probs=83.7

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----   89 (148)
                      -.++|...   ...++|+.|+.|+++|+.++   ....+..|...+.++.+++....+++|++|++|++||.+..     
T Consensus        58 L~c~F~d~---~~~~~G~~dg~vr~~Dln~~---~~~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~  131 (323)
T KOG1036|consen   58 LDCAFADE---STIVTGGLDGQVRRYDLNTG---NEDQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGT  131 (323)
T ss_pred             eeeeccCC---ceEEEeccCceEEEEEecCC---cceeeccCCCceEEEEeeccCCeEEEcccCccEEEEeccccccccc
Confidence            45555553   45677799999999999997   45566679999999999999999999999999999999965     


Q ss_pred             cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062          90 FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV  132 (148)
Q Consensus        90 ~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~  132 (148)
                      +.  ..|.++..  .+..|++|+.+.      ++.+||+++...+
T Consensus       132 ~d~~kkVy~~~v--~g~~LvVg~~~r------~v~iyDLRn~~~~  168 (323)
T KOG1036|consen  132 FDQGKKVYCMDV--SGNRLVVGTSDR------KVLIYDLRNLDEP  168 (323)
T ss_pred             cccCceEEEEec--cCCEEEEeecCc------eEEEEEcccccch
Confidence            22  55666654  778889988877      9999999976543

>KOG0321|consensus

Probab=99.32  E-value=1.3e-11  Score=92.49  Aligned_cols=107  Identities=20%  Similarity=0.232  Sum_probs=83.7

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEE--ecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEECCcc--
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVIN--CEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIWDLSLC--   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~--~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d~~~~--   89 (148)
                      ..++|.|-  ...|++++.|.++++||+++.  +....  +.+|...+.+++|.| +...+++|+.||.+.|||++-.  
T Consensus       104 fDl~wapg--e~~lVsasGDsT~r~Wdvk~s--~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~  179 (720)
T KOG0321|consen  104 FDLKWAPG--ESLLVSASGDSTIRPWDVKTS--RLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGV  179 (720)
T ss_pred             EeeccCCC--ceeEEEccCCceeeeeeeccc--eeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccch
Confidence            44444552  667888899999999999998  55554  889999999999999 5568899999999999999743  


Q ss_pred             -----------------------cc----------ccceE---EEEccCCCEEEEEec-CCceecCeeEEEeecCCCcc
Q psy7062          90 -----------------------FI----------QQVNA---LRITPDKQLLASAEE-LSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        90 -----------------------~~----------~~i~~---~~~sp~~~~l~~~~~-d~~~~~~~~i~~~d~~~~~~  131 (148)
                                             +.          ..|..   +.+..|...|++++. |+      .|++||++....
T Consensus       180 d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~------~iKVWDLRk~~~  252 (720)
T KOG0321|consen  180 DALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADS------TIKVWDLRKNYT  252 (720)
T ss_pred             hhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCc------ceEEEeeccccc
Confidence                                   00          23344   556678888999887 66      899999997653

>KOG0293|consensus

Probab=99.31  E-value=2.7e-11  Score=87.01  Aligned_cols=106  Identities=19%  Similarity=0.221  Sum_probs=89.8

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEec-CCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCE-GVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~-~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---   89 (148)
                      ..-+.|+|+  .++|++|+.+..+++||+.++  .....+. ++...+.+.+|+|||.-+++|+.|+.+..||+...   
T Consensus       272 V~yi~wSPD--dryLlaCg~~e~~~lwDv~tg--d~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn~~~  347 (519)
T KOG0293|consen  272 VSYIMWSPD--DRYLLACGFDEVLSLWDVDTG--DLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGNILG  347 (519)
T ss_pred             eEEEEECCC--CCeEEecCchHheeeccCCcc--hhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCCcchhh
Confidence            456778888  788999899999999999998  6665554 34577899999999999999999999999999876   


Q ss_pred             -cc----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          90 -FI----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        90 -~~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                       .+    ..+.+++.++||++++..+.|.      .|++++....
T Consensus       348 ~W~gvr~~~v~dlait~Dgk~vl~v~~d~------~i~l~~~e~~  386 (519)
T KOG0293|consen  348 NWEGVRDPKVHDLAITYDGKYVLLVTVDK------KIRLYNREAR  386 (519)
T ss_pred             cccccccceeEEEEEcCCCcEEEEEeccc------ceeeechhhh
Confidence             22    6699999999999999999988      8999987644

>KOG2096|consensus

Probab=99.31  E-value=5.4e-11  Score=83.15  Aligned_cols=100  Identities=9%  Similarity=0.139  Sum_probs=83.6

Q ss_pred             EeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECC---cc------
Q psy7062          19 FDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLS---LC------   89 (148)
Q Consensus        19 ~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~---~~------   89 (148)
                      +-.-..+.++.+++.|.+|.+|+++ +  +.+..+......-+..++||+|+++++++...-+++|.+-   .+      
T Consensus       193 iGiA~~~k~imsas~dt~i~lw~lk-G--q~L~~idtnq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~  269 (420)
T KOG2096|consen  193 IGIAGNAKYIMSASLDTKICLWDLK-G--QLLQSIDTNQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVK  269 (420)
T ss_pred             EeecCCceEEEEecCCCcEEEEecC-C--ceeeeeccccccccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhh
Confidence            3333458999999999999999999 4  6777776655566778999999999999999999999883   23      


Q ss_pred             --cc-----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          90 --FI-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        90 --~~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                        |+     +.+..++|+++...+++.+.||      ++++||..
T Consensus       270 rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG------~wriwdtd  308 (420)
T KOG2096|consen  270 RVFSLKGHQSAVLAAAFSNSSTRAVTVSKDG------KWRIWDTD  308 (420)
T ss_pred             hhheeccchhheeeeeeCCCcceeEEEecCC------cEEEeecc
Confidence              22     7799999999999999999999      99999854

>KOG1188|consensus

Probab=99.30  E-value=6.9e-11  Score=82.97  Aligned_cols=110  Identities=20%  Similarity=0.240  Sum_probs=84.4

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCC-CCEEEEEEccCCCEEEEEeC----CCcEEEEECCcc
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVS-KNVVEVGFQEDGKWMFTGGE----DCRARIWDLSLC   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~-~~i~~~~~sp~~~~l~~~~~----~~~i~l~d~~~~   89 (148)
                      +.+.|........+.+|+.||+|++||+++.....+..+..++ ..-.+++.+-++..+++|..    +..+.+||++..
T Consensus        74 N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~  153 (376)
T KOG1188|consen   74 NGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSE  153 (376)
T ss_pred             cceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcceEeeccCcCCeEEeccccccCceEEEEEEeccc
Confidence            4566654435778899999999999999988444555566665 34556666657778888764    467999999987


Q ss_pred             ------cc----ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 ------FI----QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 ------~~----~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                            +.    ..|++++|+| +...|++|+.||      .|.++|+..+.
T Consensus       154 qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDG------LvnlfD~~~d~  199 (376)
T KOG1188|consen  154 QQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDG------LVNLFDTKKDN  199 (376)
T ss_pred             cchhhhhhhhccCcceeEEecCCCCCeEEeecccc------eEEeeecCCCc
Confidence                  22    7899999999 678999999999      89999987553

>KOG0322|consensus

Probab=99.30  E-value=4.1e-11  Score=81.69  Aligned_cols=63  Identities=29%  Similarity=0.419  Sum_probs=57.7

Q ss_pred             CCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeec
Q psy7062          58 KNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNS  126 (148)
Q Consensus        58 ~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~  126 (148)
                      ..+..+.+.||++.++++++|+.+|+|..++.     ++   ..+++++|+|+...++.++.|.      +|.+|++
T Consensus       252 pGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~------rISLWkL  322 (323)
T KOG0322|consen  252 PGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDA------RISLWKL  322 (323)
T ss_pred             CCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCCc------eEEeeec
Confidence            46788899999999999999999999999988     33   8899999999999999999988      9999986

>KOG1009|consensus

Probab=99.29  E-value=7e-11  Score=84.48  Aligned_cols=110  Identities=19%  Similarity=0.340  Sum_probs=87.6

Q ss_pred             EEEEeCCCCccEEEEEecCCeEEEEeCCCCC-------CCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECC-
Q psy7062          16 STVFDSKHLVEMVAALGGYQHIRMYDFGSNN-------PNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLS-   87 (148)
Q Consensus        16 ~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~-------~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~-   87 (148)
                      .+.|+.+. .+.+++|+.|..|++|.++...       .+.+..+..|...|+.+.|+|+|..+++|+.++.+.+|... 
T Consensus        18 s~dfq~n~-~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~   96 (434)
T KOG1009|consen   18 SVDFQKNS-LNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQGD   96 (434)
T ss_pred             EEEeccCc-ccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEEEecC
Confidence            44444543 3389999999999999886541       12244567799999999999999999999999999999876 


Q ss_pred             -------cc-------------cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062          88 -------LC-------------FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV  132 (148)
Q Consensus        88 -------~~-------------~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~  132 (148)
                             +.             +.   ..+..++|+|+++++++++.|.      .+++||+......
T Consensus        97 ~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dn------s~~l~Dv~~G~l~  158 (434)
T KOG1009|consen   97 VRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDN------SVRLWDVHAGQLL  158 (434)
T ss_pred             cCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccc------eEEEEEeccceeE
Confidence                   21             11   6688999999999999999977      8999998876543

>KOG0290|consensus

Probab=99.29  E-value=9.7e-11  Score=80.91  Aligned_cols=111  Identities=14%  Similarity=0.188  Sum_probs=86.9

Q ss_pred             cEEEEEeCC-CCccEEEEEecCCeEEEEeCCCCC-CCceEEecCCCCCEEEEEEccCCC-EEEEEeCCCcEEEEECCcc-
Q psy7062          14 QISTVFDSK-HLVEMVAALGGYQHIRMYDFGSNN-PNPVINCEGVSKNVVEVGFQEDGK-WMFTGGEDCRARIWDLSLC-   89 (148)
Q Consensus        14 ~~~~~~~~~-~~~~~l~~~~~d~~v~~~d~~~~~-~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~~~~~i~l~d~~~~-   89 (148)
                      .+...||.+ -..+++.+.+-|-++-+||++++. .....++-+|...|..++|...+. .+++++.||.+|+||++.. 
T Consensus       151 aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~le  230 (364)
T KOG0290|consen  151 APLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLE  230 (364)
T ss_pred             CcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccc
Confidence            345555532 226788888999999999999861 123566778999999999998665 7899999999999999865 


Q ss_pred             ----------------------------------------------------cc---ccceEEEEccC-CCEEEEEecCC
Q psy7062          90 ----------------------------------------------------FI---QQVNALRITPD-KQLLASAEELS  113 (148)
Q Consensus        90 ----------------------------------------------------~~---~~i~~~~~sp~-~~~l~~~~~d~  113 (148)
                                                                          ++   +.++.++|.|. +.+|.+++.|.
T Consensus       231 HSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~  310 (364)
T KOG0290|consen  231 HSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDC  310 (364)
T ss_pred             cceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcc
Confidence                                                                11   67889999995 56888999877


Q ss_pred             ceecCeeEEEeecCCCc
Q psy7062         114 CCYCGAAVFVYNSCYPA  130 (148)
Q Consensus       114 ~~~~~~~i~~~d~~~~~  130 (148)
                            ++.+||+....
T Consensus       311 ------qaliWDl~q~~  321 (364)
T KOG0290|consen  311 ------QALIWDLQQMP  321 (364)
T ss_pred             ------eEEEEeccccc
Confidence                  89999987543

>KOG0646|consensus

Probab=99.28  E-value=6.4e-11  Score=85.84  Aligned_cols=102  Identities=17%  Similarity=0.234  Sum_probs=86.7

Q ss_pred             CCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-------------
Q psy7062          23 HLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-------------   89 (148)
Q Consensus        23 ~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-------------   89 (148)
                      ..|.+|+.|+..+.+.+|.+.++  +.+..+.+|=..|+++.|+-||.+++++++||.+++|++-..             
T Consensus        91 n~G~~l~ag~i~g~lYlWelssG--~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~  168 (476)
T KOG0646|consen   91 NLGYFLLAGTISGNLYLWELSSG--ILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLH  168 (476)
T ss_pred             CCceEEEeecccCcEEEEEeccc--cHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCcccee
Confidence            34888888669999999999999  889999999999999999999999999999999999998544             


Q ss_pred             -cc---ccceEEEEccC--CCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062          90 -FI---QQVNALRITPD--KQLLASAEELSCCYCGAAVFVYNSCYPAAV  132 (148)
Q Consensus        90 -~~---~~i~~~~~sp~--~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~  132 (148)
                       |.   -+|..+...+.  ...+++++.|.      ++++||+......
T Consensus       169 ~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~------t~k~wdlS~g~LL  211 (476)
T KOG0646|consen  169 IFSDHTLSITDLQIGSGGTNARLYTASEDR------TIKLWDLSLGVLL  211 (476)
T ss_pred             eeccCcceeEEEEecCCCccceEEEecCCc------eEEEEEeccceee
Confidence             22   56777777665  35899999988      9999998866543

>KOG1034|consensus

Probab=99.27  E-value=4.7e-11  Score=83.51  Aligned_cols=70  Identities=21%  Similarity=0.391  Sum_probs=61.2

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEe---cCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECC
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINC---EGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLS   87 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~---~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~   87 (148)
                      +.+.+.|. ..++++++|.|.+|++|++++.  ..+..+   .+|...|.+++|+++|..+++++.|..+++|+++
T Consensus       139 Neik~~p~-~~qlvls~SkD~svRlwnI~~~--~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~  211 (385)
T KOG1034|consen  139 NEIKFHPD-RPQLVLSASKDHSVRLWNIQTD--VCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLN  211 (385)
T ss_pred             hhhhcCCC-CCcEEEEecCCceEEEEeccCC--eEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecC
Confidence            44555665 3689999999999999999998  777665   4699999999999999999999999999999998

>KOG4328|consensus

Probab=99.26  E-value=7.2e-11  Score=85.52  Aligned_cols=112  Identities=16%  Similarity=0.213  Sum_probs=92.3

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCC--CCCCceEEecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEECCcc-
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGS--NNPNPVINCEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIWDLSLC-   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~--~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d~~~~-   89 (148)
                      ..+++|+|.....++++|...|+|-+||+.+  +....+..+..|...|.++.|+| +...+++.+.||++++-|++.. 
T Consensus       189 it~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~~~~i  268 (498)
T KOG4328|consen  189 ITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQDFEGNI  268 (498)
T ss_pred             eEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCceeeeeeecchh
Confidence            5688899988789999999999999999962  22244667778999999999999 5678999999999999888654 


Q ss_pred             ----------------------------------cc------------------ccceEEEEcc-CCCEEEEEecCCcee
Q psy7062          90 ----------------------------------FI------------------QQVNALRITP-DKQLLASAEELSCCY  116 (148)
Q Consensus        90 ----------------------------------~~------------------~~i~~~~~sp-~~~~l~~~~~d~~~~  116 (148)
                                                        |.                  ..|+.++++| ...+|++++.|+   
T Consensus       269 ~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~---  345 (498)
T KOG4328|consen  269 SEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATASLDQ---  345 (498)
T ss_pred             hHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCchheeecccCc---
Confidence                                              00                  6788999999 566899999988   


Q ss_pred             cCeeEEEeecCCCcc
Q psy7062         117 CGAAVFVYNSCYPAA  131 (148)
Q Consensus       117 ~~~~i~~~d~~~~~~  131 (148)
                         +.++||.+....
T Consensus       346 ---T~kIWD~R~l~~  357 (498)
T KOG4328|consen  346 ---TAKIWDLRQLRG  357 (498)
T ss_pred             ---ceeeeehhhhcC
Confidence               999999987653

>KOG2048|consensus

Probab=99.26  E-value=2.5e-10  Score=86.02  Aligned_cols=109  Identities=10%  Similarity=0.099  Sum_probs=93.6

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ...++|...  +++ .+.+.+|+|.-||+.+.  +++..+......|.+++.+|.+..++.|+.||.+..++....    
T Consensus        72 IE~L~W~e~--~RL-FS~g~sg~i~EwDl~~l--k~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~  146 (691)
T KOG2048|consen   72 IESLAWAEG--GRL-FSSGLSGSITEWDLHTL--KQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITY  146 (691)
T ss_pred             eeeEEEccC--CeE-EeecCCceEEEEecccC--ceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEE
Confidence            468888843  445 55588999999999998  888888878899999999999999999999998888888766    


Q ss_pred             ---cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCccee
Q psy7062          90 ---FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVV  133 (148)
Q Consensus        90 ---~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~  133 (148)
                         |.   +++.++.|+|++..++.|+.||      .|++||........
T Consensus       147 ~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg------~Iriwd~~~~~t~~  190 (691)
T KOG2048|consen  147 KRSLMRQKSRVLSLSWNPTGTKIAGGSIDG------VIRIWDVKSGQTLH  190 (691)
T ss_pred             EeecccccceEEEEEecCCccEEEecccCc------eEEEEEcCCCceEE
Confidence               22   8999999999999999999999      99999998776655

>KOG0288|consensus

Probab=99.26  E-value=6.6e-11  Score=84.80  Aligned_cols=100  Identities=18%  Similarity=0.247  Sum_probs=81.0

Q ss_pred             EEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecC----CCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062          17 TVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEG----VSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        17 ~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~----~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---   89 (148)
                      ...+....+.-+.+++.|.++.+.|+++.  +....+.+    ..+.++.+.|||++.|+++|+.||.+++|++.++   
T Consensus       345 tSl~ls~~g~~lLsssRDdtl~viDlRt~--eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE  422 (459)
T KOG0288|consen  345 TSLDLSMDGLELLSSSRDDTLKVIDLRTK--EIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLE  422 (459)
T ss_pred             eeEeeccCCeEEeeecCCCceeeeecccc--cEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccCceEE
Confidence            33343334666677699999999999998  65555543    2356889999999999999999999999999988   


Q ss_pred             --cc-----ccceEEEEccCCCEEEEEecCCceecCeeEEEe
Q psy7062          90 --FI-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVY  124 (148)
Q Consensus        90 --~~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~  124 (148)
                        +.     ..|.++.|+|.|..+++++.++      .+.+|
T Consensus       423 ~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~------~v~lW  458 (459)
T KOG0288|consen  423 KVLSLSTSNAAITSLSWNPSGSGLLSADKQK------AVTLW  458 (459)
T ss_pred             EEeccCCCCcceEEEEEcCCCchhhcccCCc------ceEec
Confidence              22     3699999999999999999877      78888

>KOG2111|consensus

Probab=99.26  E-value=3.4e-10  Score=78.92  Aligned_cols=109  Identities=14%  Similarity=0.216  Sum_probs=86.8

Q ss_pred             EEEEeCCCCccEEEEEe-cCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCc-EEEEECCcc----
Q psy7062          16 STVFDSKHLVEMVAALG-GYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCR-ARIWDLSLC----   89 (148)
Q Consensus        16 ~~~~~~~~~~~~l~~~~-~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~-i~l~d~~~~----   89 (148)
                      .++..|..+..+||.-+ .-|.|.+-|+.......-..+.+|.+.|.+++++-+|..++++|..|+ ||+||..++    
T Consensus       139 lC~~~~~~~k~~LafPg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~  218 (346)
T KOG2111|consen  139 LCSLCPTSNKSLLAFPGFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQ  218 (346)
T ss_pred             eEeecCCCCceEEEcCCCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEee
Confidence            44555655556665533 346899999987622223567789999999999999999999999997 789999998    


Q ss_pred             -cc-----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 -FI-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 -~~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                       |.     ..+++++|||+..+|+++++.|      +++++.++...
T Consensus       219 E~RRG~d~A~iy~iaFSp~~s~LavsSdKg------TlHiF~l~~~~  259 (346)
T KOG2111|consen  219 ELRRGVDRADIYCIAFSPNSSWLAVSSDKG------TLHIFSLRDTE  259 (346)
T ss_pred             eeecCCchheEEEEEeCCCccEEEEEcCCC------eEEEEEeecCC
Confidence             32     7899999999999999999977      99999987543

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.25  E-value=3.6e-10  Score=79.42  Aligned_cols=99  Identities=12%  Similarity=0.111  Sum_probs=77.1

Q ss_pred             cEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEE-EEEeCCCcEEEEECCcc-----cc--ccceEE
Q psy7062          26 EMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWM-FTGGEDCRARIWDLSLC-----FI--QQVNAL   97 (148)
Q Consensus        26 ~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l-~~~~~~~~i~l~d~~~~-----~~--~~i~~~   97 (148)
                      .++++++.|+.+++||++++  +.+..+..+. .+..++|+|+++.+ ++++.++.+++||..++     +.  ..+..+
T Consensus         2 ~~~~s~~~d~~v~~~d~~t~--~~~~~~~~~~-~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~   78 (300)
T TIGR03866         2 KAYVSNEKDNTISVIDTATL--EVTRTFPVGQ-RPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPDPELF   78 (300)
T ss_pred             cEEEEecCCCEEEEEECCCC--ceEEEEECCC-CCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCCccEE
Confidence            57888899999999999987  6777776543 36679999999976 56677899999999876     22  446778


Q ss_pred             EEccCCCEEEEEe-cCCceecCeeEEEeecCCCccee
Q psy7062          98 RITPDKQLLASAE-ELSCCYCGAAVFVYNSCYPAAVV  133 (148)
Q Consensus        98 ~~sp~~~~l~~~~-~d~~~~~~~~i~~~d~~~~~~~~  133 (148)
                      .|+|+++.+++++ .++      .+++||+++.+...
T Consensus        79 ~~~~~g~~l~~~~~~~~------~l~~~d~~~~~~~~  109 (300)
T TIGR03866        79 ALHPNGKILYIANEDDN------LVTVIDIETRKVLA  109 (300)
T ss_pred             EECCCCCEEEEEcCCCC------eEEEEECCCCeEEe
Confidence            9999999776654 445      89999998755443

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG4378|consensus

Probab=99.25  E-value=1.9e-11  Score=89.62  Aligned_cols=112  Identities=15%  Similarity=0.164  Sum_probs=92.6

Q ss_pred             eCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc---
Q psy7062          20 DSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI---   91 (148)
Q Consensus        20 ~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~---   91 (148)
                      +......++++|+..+.|++||++.+  ...+.+++|++.|+++.++-...++++++..|.|.+..+.+.     |.   
T Consensus        86 ~~~s~S~y~~sgG~~~~Vkiwdl~~k--l~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~s  163 (673)
T KOG4378|consen   86 ACASQSLYEISGGQSGCVKIWDLRAK--LIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDS  163 (673)
T ss_pred             hhhhcceeeeccCcCceeeehhhHHH--HHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCC
Confidence            33334689999999999999999976  677888999999999999999999999999999999999887     44   


Q ss_pred             -ccceEEEEccCCC-EEEEEecCCceecCeeEEEeecCCCcceeccCccc
Q psy7062          92 -QQVNALRITPDKQ-LLASAEELSCCYCGAAVFVYNSCYPAAVVASNTLV  139 (148)
Q Consensus        92 -~~i~~~~~sp~~~-~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~~~  139 (148)
                       +.++.+.|+|..+ +|.+++.+|      .|.+||+....++..+.+.+
T Consensus       164 gqsvRll~ys~skr~lL~~asd~G------~VtlwDv~g~sp~~~~~~~H  207 (673)
T KOG4378|consen  164 GQSVRLLRYSPSKRFLLSIASDKG------AVTLWDVQGMSPIFHASEAH  207 (673)
T ss_pred             CCeEEEeecccccceeeEeeccCC------eEEEEeccCCCcccchhhhc
Confidence             5677899999776 555667766      89999999777766554443

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.25  E-value=6e-10  Score=78.31  Aligned_cols=114  Identities=17%  Similarity=0.145  Sum_probs=82.2

Q ss_pred             cEEEEEeCCCCccEEE-EEecCCeEEEEeCCCCCCCceEEecCCC-------CCEEEEEEccCCCEEEE-EeCCCcEEEE
Q psy7062          14 QISTVFDSKHLVEMVA-ALGGYQHIRMYDFGSNNPNPVINCEGVS-------KNVVEVGFQEDGKWMFT-GGEDCRARIW   84 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~-~~~~d~~v~~~d~~~~~~~~~~~~~~~~-------~~i~~~~~sp~~~~l~~-~~~~~~i~l~   84 (148)
                      ...++|+++  ++.|+ ++..++.+.+||++++  +.+..+..+.       .....++++|+++.++. ...++.+.+|
T Consensus       159 ~~~~~~s~d--g~~l~~~~~~~~~v~i~d~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~  234 (300)
T TIGR03866       159 PRFAEFTAD--GKELWVSSEIGGTVSVIDVATR--KVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVV  234 (300)
T ss_pred             ccEEEECCC--CCEEEEEcCCCCEEEEEEcCcc--eeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEE
Confidence            345677777  66664 4345889999999987  5555443211       12356889999997644 4456789999


Q ss_pred             ECCcc-----cc--ccceEEEEccCCCEEEEEe-cCCceecCeeEEEeecCCCcceeccCc
Q psy7062          85 DLSLC-----FI--QQVNALRITPDKQLLASAE-ELSCCYCGAAVFVYNSCYPAAVVASNT  137 (148)
Q Consensus        85 d~~~~-----~~--~~i~~~~~sp~~~~l~~~~-~d~~~~~~~~i~~~d~~~~~~~~~~~~  137 (148)
                      |.++.     +.  ..+.++.|+|++++|++++ .++      .|.+||..+.+.+..++.
T Consensus       235 d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~------~i~v~d~~~~~~~~~~~~  289 (300)
T TIGR03866       235 DAKTYEVLDYLLVGQRVWQLAFTPDEKYLLTTNGVSN------DVSVIDVAALKVIKSIKV  289 (300)
T ss_pred             ECCCCcEEEEEEeCCCcceEEECCCCCEEEEEcCCCC------eEEEEECCCCcEEEEEEc
Confidence            99876     22  6788999999999988875 455      899999998877666543

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG0299|consensus

Probab=99.24  E-value=1.1e-10  Score=84.51  Aligned_cols=105  Identities=12%  Similarity=0.235  Sum_probs=85.0

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----   89 (148)
                      .+++.+++  +.+|++|+.|..+.+|+.++.  +.+..+.+|...|.+++|-....-+++++.|..+++|++...     
T Consensus       206 l~~avS~D--gkylatgg~d~~v~Iw~~~t~--ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vet  281 (479)
T KOG0299|consen  206 LTLAVSSD--GKYLATGGRDRHVQIWDCDTL--EHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVET  281 (479)
T ss_pred             EEEEEcCC--CcEEEecCCCceEEEecCccc--chhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHH
Confidence            34455555  999999999999999999999  899999999999999999999999999999999999999876     


Q ss_pred             -cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          90 -FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        90 -~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                       |.  ..|..+.-...++.+.+++.|+      ++++|+++..
T Consensus       282 lyGHqd~v~~IdaL~reR~vtVGgrDr------T~rlwKi~ee  318 (479)
T KOG0299|consen  282 LYGHQDGVLGIDALSRERCVTVGGRDR------TVRLWKIPEE  318 (479)
T ss_pred             HhCCccceeeechhcccceEEeccccc------eeEEEecccc
Confidence             22  5565555555566666666777      7778877543

>KOG1539|consensus

Probab=99.24  E-value=4e-10  Score=86.83  Aligned_cols=120  Identities=13%  Similarity=0.202  Sum_probs=97.7

Q ss_pred             eeeecCc-EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEEC
Q psy7062           8 ILTAFGQ-ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL   86 (148)
Q Consensus         8 ~~~~~~~-~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~   86 (148)
                      +++..+. ....++|+..=+-++.|+.+|.+.+|+++++  +.+.+++.+...|+++.-+|--..++.|..+|+|.++++
T Consensus       154 ~~~~~~~~Ital~HP~TYLNKIvvGs~~G~lql~Nvrt~--K~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNl  231 (910)
T KOG1539|consen  154 FLKVEGDFITALLHPSTYLNKIVVGSSQGRLQLWNVRTG--KVVYTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNL  231 (910)
T ss_pred             eeeccCCceeeEecchhheeeEEEeecCCcEEEEEeccC--cEEEEecccccceeEeccCCcceEEEEeccCceEEEEEc
Confidence            3444444 3344567666666778899999999999999  999999999999999999999999999999999999999


Q ss_pred             Ccc-----cc---ccceEEEEccCCC-EEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          87 SLC-----FI---QQVNALRITPDKQ-LLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        87 ~~~-----~~---~~i~~~~~sp~~~-~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                      +..     |+   ++|.+++|.-||+ .+++++..|      .+.+||+...+.+...
T Consensus       232 K~dkil~sFk~d~g~VtslSFrtDG~p~las~~~~G------~m~~wDLe~kkl~~v~  283 (910)
T KOG1539|consen  232 KFDKILMSFKQDWGRVTSLSFRTDGNPLLASGRSNG------DMAFWDLEKKKLINVT  283 (910)
T ss_pred             ccCcEEEEEEccccceeEEEeccCCCeeEEeccCCc------eEEEEEcCCCeeeeee
Confidence            987     44   8899999999887 555555545      8999999876654433

>KOG0307|consensus

Probab=99.24  E-value=1.6e-11  Score=96.66  Aligned_cols=115  Identities=17%  Similarity=0.210  Sum_probs=91.3

Q ss_pred             EEEEEeCCCCc--cEEEEEecCCeEEEEeCCC----CCCCceEEecCCCCCEEEEEEccCC-CEEEEEeCCCcEEEEECC
Q psy7062          15 ISTVFDSKHLV--EMVAALGGYQHIRMYDFGS----NNPNPVINCEGVSKNVVEVGFQEDG-KWMFTGGEDCRARIWDLS   87 (148)
Q Consensus        15 ~~~~~~~~~~~--~~l~~~~~d~~v~~~d~~~----~~~~~~~~~~~~~~~i~~~~~sp~~-~~l~~~~~~~~i~l~d~~   87 (148)
                      ..++|.+...+  .+++.|.+||.|.+||...    ...+.+.+...|++.|.+++|++.+ +++++|+.+|.|.+||++
T Consensus        68 ~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDln  147 (1049)
T KOG0307|consen   68 NKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLN  147 (1049)
T ss_pred             eeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccC
Confidence            56778754333  4799999999999999875    1123567778899999999999955 599999999999999998


Q ss_pred             cc---cc-------ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          88 LC---FI-------QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        88 ~~---~~-------~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                      +.   +.       ..|.+++|+. ..+.|++++.+|      ++.|||++..+++...
T Consensus       148 n~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg------~~~iWDlr~~~pii~l  200 (1049)
T KOG0307|consen  148 KPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSG------RAVIWDLRKKKPIIKL  200 (1049)
T ss_pred             CcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCC------CceeccccCCCccccc
Confidence            76   21       7899999987 456788888866      8999999977665444

>KOG1408|consensus

Probab=99.22  E-value=3.2e-10  Score=86.53  Aligned_cols=100  Identities=18%  Similarity=0.239  Sum_probs=88.1

Q ss_pred             CCCCccEEEEEecCCeEEEEeCCCCCCCceEEecC---CCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc------cc
Q psy7062          21 SKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEG---VSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC------FI   91 (148)
Q Consensus        21 ~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~---~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~------~~   91 (148)
                      -++..+++++++.|+.|++||++++  +..+.|++   |.+....+...|.|.++++.+.|.++.++|.-++      +.
T Consensus       604 Vdp~~k~v~t~cQDrnirif~i~sg--Kq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~G  681 (1080)
T KOG1408|consen  604 VDPTSKLVVTVCQDRNIRIFDIESG--KQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMTG  681 (1080)
T ss_pred             eCCCcceEEEEecccceEEEecccc--ceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhhcC
Confidence            3344899999999999999999999  78888875   5567788899999999999999999999999988      22


Q ss_pred             --ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062          92 --QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        92 --~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                        ..++.+.|.+|.++|++.+.||      .|.+|.++.
T Consensus       682 HsE~VTG~kF~nDCkHlISvsgDg------CIFvW~lp~  714 (1080)
T KOG1408|consen  682 HSEAVTGVKFLNDCKHLISVSGDG------CIFVWKLPL  714 (1080)
T ss_pred             cchheeeeeecccchhheeecCCc------eEEEEECch
Confidence              6789999999999999999999      999999763

>KOG2445|consensus

Probab=99.22  E-value=7.1e-10  Score=77.13  Aligned_cols=110  Identities=17%  Similarity=0.183  Sum_probs=88.5

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCC--CCceEEecCCCCCEEEEEEcc--CCCEEEEEeCCCcEEEEECCcc
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNN--PNPVINCEGVSKNVVEVGFQE--DGKWMFTGGEDCRARIWDLSLC   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~--~~~~~~~~~~~~~i~~~~~sp--~~~~l~~~~~~~~i~l~d~~~~   89 (148)
                      ..++.||+.  |+.+|+|+.|+++++||.+...  .......+.|.+.|..+.|.+  -|+.+++++.|+++.+|.-...
T Consensus        16 ihdVs~D~~--GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~~   93 (361)
T KOG2445|consen   16 IHDVSFDFY--GRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEEQEK   93 (361)
T ss_pred             eeeeeeccc--CceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeeeeccc
Confidence            567888887  9999999999999999975432  234456778999999999964  4889999999999999976322


Q ss_pred             --------------cc---ccceEEEEcc--CCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          90 --------------FI---QQVNALRITP--DKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        90 --------------~~---~~i~~~~~sp--~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                                    +.   ..+..+.|.|  -|-.|++++.||      .+++|+...+..
T Consensus        94 ~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG------~lRIYEA~dp~n  148 (361)
T KOG2445|consen   94 SEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADG------ILRIYEAPDPMN  148 (361)
T ss_pred             ccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCc------EEEEEecCCccc
Confidence                          11   7899999999  567899999999      999998765543

>KOG0301|consensus

Probab=99.21  E-value=1.8e-10  Score=87.06  Aligned_cols=107  Identities=15%  Similarity=0.234  Sum_probs=86.5

Q ss_pred             eecCcEEEEEeC-CCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCc
Q psy7062          10 TAFGQISTVFDS-KHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSL   88 (148)
Q Consensus        10 ~~~~~~~~~~~~-~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~   88 (148)
                      ..++|.+.+|.. .-..+.+++||.|.+|++|.-.    +.++++.+|+..|.++++-+++ .++++++||.|++|++..
T Consensus       135 ~l~gH~asVWAv~~l~e~~~vTgsaDKtIklWk~~----~~l~tf~gHtD~VRgL~vl~~~-~flScsNDg~Ir~w~~~g  209 (745)
T KOG0301|consen  135 SLQGHTASVWAVASLPENTYVTGSADKTIKLWKGG----TLLKTFSGHTDCVRGLAVLDDS-HFLSCSNDGSIRLWDLDG  209 (745)
T ss_pred             ccCCcchheeeeeecCCCcEEeccCcceeeeccCC----chhhhhccchhheeeeEEecCC-CeEeecCCceEEEEeccC
Confidence            356777777761 1114488999999999999884    5689999999999999998854 478999999999999954


Q ss_pred             c--cc-----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          89 C--FI-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        89 ~--~~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                      .  ++     .-+.++....+.+.++++++|+      ++++|+..
T Consensus       210 e~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDr------tlriW~~~  249 (745)
T KOG0301|consen  210 EVLLEMHGHTNFVYSISMALSDGLIVSTGEDR------TLRIWKKD  249 (745)
T ss_pred             ceeeeeeccceEEEEEEecCCCCeEEEecCCc------eEEEeecC
Confidence            4  22     6678888778889999999999      99999865

>KOG1009|consensus

Probab=99.21  E-value=5.3e-11  Score=85.06  Aligned_cols=98  Identities=17%  Similarity=0.275  Sum_probs=83.6

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCC--------C-----C-CCCceEEecCCCCCEEEEEEccCCCEEEEEeCCC
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFG--------S-----N-NPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDC   79 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~--------~-----~-~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~   79 (148)
                      .+++-|+++  |++|++|++++.+.+|...        +     + .......+.+|...|..++|+|++.++++++.|+
T Consensus        68 VN~vRf~p~--gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dn  145 (434)
T KOG1009|consen   68 VNVVRFSPD--GELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDN  145 (434)
T ss_pred             eEEEEEcCC--cCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccc
Confidence            578888888  9999999999999999877        2     1 0122355678999999999999999999999999


Q ss_pred             cEEEEECCcc-----cc---ccceEEEEccCCCEEEEEecCC
Q psy7062          80 RARIWDLSLC-----FI---QQVNALRITPDKQLLASAEELS  113 (148)
Q Consensus        80 ~i~l~d~~~~-----~~---~~i~~~~~sp~~~~l~~~~~d~  113 (148)
                      .+++||+..+     +.   ..++.++|.|.++++++-+.|+
T Consensus       146 s~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr  187 (434)
T KOG1009|consen  146 SVRLWDVHAGQLLAILDDHEHYVQGVAWDPLNQYVASKSSDR  187 (434)
T ss_pred             eEEEEEeccceeEeeccccccccceeecchhhhhhhhhccCc
Confidence            9999999998     21   7789999999999999988877

>KOG2919|consensus

Probab=99.20  E-value=4.7e-10  Score=78.60  Aligned_cols=109  Identities=20%  Similarity=0.291  Sum_probs=89.0

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeC-CCcEEEEECCcc---
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE-DCRARIWDLSLC---   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-~~~i~l~d~~~~---   89 (148)
                      ..+++|+|.. ..+++.++....+-+|.-...  +++..+-+|...|+.+.|+++|+.+++|.+ +..|..||++..   
T Consensus       210 isc~a~sP~~-~~~~a~gsY~q~~giy~~~~~--~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~p  286 (406)
T KOG2919|consen  210 ISCFAFSPMD-SKTLAVGSYGQRVGIYNDDGR--RPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDP  286 (406)
T ss_pred             eeeeeccCCC-CcceeeecccceeeeEecCCC--CceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccch
Confidence            4677888764 678899888889999888877  888888899999999999999999999875 679999999876   


Q ss_pred             ---cc------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          90 ---FI------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        90 ---~~------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                         +.      ..---+...|++++|++|+.||      .|++||+..+..
T Consensus       287 v~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG------~V~vwdlk~~gn  331 (406)
T KOG2919|consen  287 VYALERHVGDTNQRILFDLDPKGEILASGDTDG------SVRVWDLKDLGN  331 (406)
T ss_pred             hhhhhhhccCccceEEEecCCCCceeeccCCCc------cEEEEecCCCCC
Confidence               22      2222345568999999999988      999999987543

>KOG1310|consensus

Probab=99.20  E-value=2.4e-10  Score=84.86  Aligned_cols=107  Identities=17%  Similarity=0.257  Sum_probs=90.3

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEe-cCCCCCEEEEEEcc--CCCEEEEEeCCCcEEEEECCcc-
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINC-EGVSKNVVEVGFQE--DGKWMFTGGEDCRARIWDLSLC-   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~-~~~~~~i~~~~~sp--~~~~l~~~~~~~~i~l~d~~~~-   89 (148)
                      .+++.|..+  |.+|++|++|-.+.+||.-..  +.+..+ .+|+..|.+++|-|  +.+.+++|..|..|++||+.+. 
T Consensus        53 VN~LeWn~d--G~lL~SGSDD~r~ivWd~~~~--KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl~~~~  128 (758)
T KOG1310|consen   53 VNCLEWNAD--GELLASGSDDTRLIVWDPFEY--KLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDLDSSK  128 (758)
T ss_pred             ecceeecCC--CCEEeecCCcceEEeecchhc--ceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEeccccc
Confidence            467788877  999999999999999999876  666555 47999999999999  4558899999999999999853 


Q ss_pred             --------------cc---ccceEEEEccCC-CEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 --------------FI---QQVNALRITPDK-QLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 --------------~~---~~i~~~~~sp~~-~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                                    +.   .++..++-.|++ ..+.++++||      +|+-+|++.+.
T Consensus       129 ~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDG------tirQyDiREph  181 (758)
T KOG1310|consen  129 EGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDG------TIRQYDIREPH  181 (758)
T ss_pred             ccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCc------ceeeecccCCc
Confidence                          11   777888888977 7899999999      99999998754

>KOG0299|consensus

Probab=99.20  E-value=2.1e-10  Score=83.18  Aligned_cols=110  Identities=23%  Similarity=0.293  Sum_probs=89.5

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCC--c-------------eEEe-cCCCCCEEEEEEccCCCEEEEEeCC
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPN--P-------------VINC-EGVSKNVVEVGFQEDGKWMFTGGED   78 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~--~-------------~~~~-~~~~~~i~~~~~sp~~~~l~~~~~~   78 (148)
                      .++++.++  ..+..+++.+++|.-|++.+++..  .             ...- ++|...+.++++++||+++++|+.|
T Consensus       146 ~~vals~d--~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgkylatgg~d  223 (479)
T KOG0299|consen  146 TSVALSPD--DKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGKYLATGGRD  223 (479)
T ss_pred             eEEEeecc--ccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCcEEEecCCC
Confidence            45555565  788899999999999999887311  0             0011 2677889999999999999999999


Q ss_pred             CcEEEEECCcc-----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062          79 CRARIWDLSLC-----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV  132 (148)
Q Consensus        79 ~~i~l~d~~~~-----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~  132 (148)
                      ..+++||.++.     |.   ..|.+++|-.+...|.+++.|+      .|++|++.....+
T Consensus       224 ~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Dr------svkvw~~~~~s~v  279 (479)
T KOG0299|consen  224 RHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADR------SVKVWSIDQLSYV  279 (479)
T ss_pred             ceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCC------ceEEEehhHhHHH
Confidence            99999999988     44   8899999998889999999988      9999998755443

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.19  E-value=2.8e-09  Score=71.45  Aligned_cols=115  Identities=14%  Similarity=0.184  Sum_probs=76.9

Q ss_pred             EEEEEeCCCCccEEEEEec----------CCeEEEEeCCCCCCCceEEecC-CCCCEEEEEEccCCCEEEE--EeCCCcE
Q psy7062          15 ISTVFDSKHLVEMVAALGG----------YQHIRMYDFGSNNPNPVINCEG-VSKNVVEVGFQEDGKWMFT--GGEDCRA   81 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~----------d~~v~~~d~~~~~~~~~~~~~~-~~~~i~~~~~sp~~~~l~~--~~~~~~i   81 (148)
                      ..+.|+++  |+.|+.-..          -+...+|.++... .....+.. ....|..++|+|+|+.++.  |..+..+
T Consensus         9 ~~~~W~~~--G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~-~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v   85 (194)
T PF08662_consen    9 AKLHWQPS--GDYLLVKVQTRVDKSGKSYYGEFELFYLNEKN-IPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKV   85 (194)
T ss_pred             EEEEeccc--CCEEEEEEEEeeccCcceEEeeEEEEEEecCC-CccceeeccCCCceEEEEECcCCCEEEEEEccCCccc
Confidence            34455665  555554333          1246666664431 23444432 3446999999999997654  4456799


Q ss_pred             EEEECCcc----cc-ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          82 RIWDLSLC----FI-QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        82 ~l~d~~~~----~~-~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                      .+||++..    +. ..+..+.|+|+|++|++++.+.   ..+.+.+||.++.+.+...
T Consensus        86 ~lyd~~~~~i~~~~~~~~n~i~wsP~G~~l~~~g~~n---~~G~l~~wd~~~~~~i~~~  141 (194)
T PF08662_consen   86 TLYDVKGKKIFSFGTQPRNTISWSPDGRFLVLAGFGN---LNGDLEFWDVRKKKKISTF  141 (194)
T ss_pred             EEEcCcccEeEeecCCCceEEEECCCCCEEEEEEccC---CCcEEEEEECCCCEEeecc
Confidence            99999855    33 6788999999999999987543   2347999999866665443

>KOG1273|consensus

Probab=99.19  E-value=1.2e-10  Score=81.36  Aligned_cols=68  Identities=13%  Similarity=0.202  Sum_probs=61.8

Q ss_pred             EEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          60 VVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        60 i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                      ..++.|++.|.+++.|+.+|.+.+||+.+.     |.   .+|.+++||++|++|+++++|-      .|.+||+..+..
T Consensus        26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~------si~lwDl~~gs~   99 (405)
T KOG1273|consen   26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDW------SIKLWDLLKGSP   99 (405)
T ss_pred             cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCc------eeEEEeccCCCc
Confidence            678999999999999999999999999887     43   8999999999999999999988      999999988775


Q ss_pred             ee
Q psy7062         132 VV  133 (148)
Q Consensus       132 ~~  133 (148)
                      ..
T Consensus       100 l~  101 (405)
T KOG1273|consen  100 LK  101 (405)
T ss_pred             ee
Confidence            43

>KOG2096|consensus

Probab=99.17  E-value=5.7e-10  Score=78.12  Aligned_cols=119  Identities=15%  Similarity=0.197  Sum_probs=89.9

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCC------CCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCc
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNN------PNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSL   88 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~------~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~   88 (148)
                      ..++.+|+  |+++++++-.-.+++|.+--.+      ......+++|.+.|..++|||+..-+++.+.||++++||+.-
T Consensus       232 ~~aavSP~--GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdV  309 (420)
T KOG2096|consen  232 YDAAVSPD--GRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDV  309 (420)
T ss_pred             cceeeCCC--CcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccc
Confidence            34556677  9999998877899999874211      124567889999999999999999999999999999999965


Q ss_pred             c---------cc----------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccCcccCcc
Q psy7062          89 C---------FI----------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTLVKPQ  142 (148)
Q Consensus        89 ~---------~~----------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~  142 (148)
                      .         +.          +....+..+|+|+.|+.+..       ..++++..+..+.....+..+...
T Consensus       310 rY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~g-------s~l~~~~se~g~~~~~~e~~h~~~  375 (420)
T KOG2096|consen  310 RYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSFG-------SDLKVFASEDGKDYPELEDIHSTT  375 (420)
T ss_pred             eEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeecC-------CceEEEEcccCccchhHHHhhcCc
Confidence            4         11          55668999999999888764       268899887765544444433333

>KOG2919|consensus

Probab=99.16  E-value=4e-10  Score=78.95  Aligned_cols=126  Identities=21%  Similarity=0.203  Sum_probs=90.2

Q ss_pred             cCcEEEEEeCCCCccEEEEEecCCeEEEEeC-CCCCCCceEEec-----CCCCCEEEEEEcc-CCCEEEEEeCCCcEEEE
Q psy7062          12 FGQISTVFDSKHLVEMVAALGGYQHIRMYDF-GSNNPNPVINCE-----GVSKNVVEVGFQE-DGKWMFTGGEDCRARIW   84 (148)
Q Consensus        12 ~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~-~~~~~~~~~~~~-----~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~   84 (148)
                      .+..+++|+++  |+.|.+ +..+.|++||+ +.+.-..+..-.     +..+.+.+++++| +.+.++.++....+=|+
T Consensus       159 taAhsL~Fs~D--Geqlfa-GykrcirvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy  235 (406)
T KOG2919|consen  159 TAAHSLQFSPD--GEQLFA-GYKRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIY  235 (406)
T ss_pred             hhheeEEecCC--CCeEee-cccceEEEeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeE
Confidence            35578999998  889888 77899999999 444212222221     2367789999999 55588899988887777


Q ss_pred             ECCcc--cc------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc-eeccCcccCcceee
Q psy7062          85 DLSLC--FI------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA-VVASNTLVKPQVTR  145 (148)
Q Consensus        85 d~~~~--~~------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~~~~  145 (148)
                      .-..+  +.      +.|+.++|.++|..|++|.+     ....|..||++.... +..++..+.-.-.|
T Consensus       236 ~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaR-----k~dkIl~WDiR~~~~pv~~L~rhv~~TNQR  300 (406)
T KOG2919|consen  236 NDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGAR-----KDDKILCWDIRYSRDPVYALERHVGDTNQR  300 (406)
T ss_pred             ecCCCCceeeecccCCCeeeEEeccCcCeeccccc-----CCCeEEEEeehhccchhhhhhhhccCccce
Confidence            66554  21      88999999999999999986     234899999997753 44444444433333

>KOG0300|consensus

Probab=99.15  E-value=1.3e-10  Score=81.36  Aligned_cols=116  Identities=15%  Similarity=0.212  Sum_probs=92.8

Q ss_pred             CcEEEEEe--CCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEE-----
Q psy7062          13 GQISTVFD--SKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWD-----   85 (148)
Q Consensus        13 ~~~~~~~~--~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d-----   85 (148)
                      ||..-.|+  .+..-.++.+++.|.+.++|.++++  .++.++.+|.+.|.+++|++.+.++++++.|++.++|.     
T Consensus       146 GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg--~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~  223 (481)
T KOG0300|consen  146 GHKDGIWHVAADSTQPICGTASADHTARIWSLESG--ACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNW  223 (481)
T ss_pred             ccccceeeehhhcCCcceeecccccceeEEeeccc--cceeeecccccceeeEEeccccceEEEccCCcchHHHHHhhcC
Confidence            44444554  2222458889999999999999999  99999999999999999999999999999999999997     


Q ss_pred             -CCcc---------------------------------------cc---ccceEEEEccCCCEEEEEecCCceecCeeEE
Q psy7062          86 -LSLC---------------------------------------FI---QQVNALRITPDKQLLASAEELSCCYCGAAVF  122 (148)
Q Consensus        86 -~~~~---------------------------------------~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~  122 (148)
                       ....                                       |.   ..+.+..|-..|+++++++.|+      +..
T Consensus       224 ~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDR------TAn  297 (481)
T KOG0300|consen  224 EVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDR------TAN  297 (481)
T ss_pred             cCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccc------cce
Confidence             2221                                       11   4455556777899999999988      899


Q ss_pred             EeecCCCcceeccC
Q psy7062         123 VYNSCYPAAVVASN  136 (148)
Q Consensus       123 ~~d~~~~~~~~~~~  136 (148)
                      +||+++...+..+.
T Consensus       298 lwDVEtge~v~~Lt  311 (481)
T KOG0300|consen  298 LWDVETGEVVNILT  311 (481)
T ss_pred             eeeeccCceecccc
Confidence            99999877665443

>KOG1007|consensus

Probab=99.15  E-value=8.4e-10  Score=76.33  Aligned_cols=109  Identities=17%  Similarity=0.283  Sum_probs=82.5

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEec-----CCCCCEEEEEEcc--CCCEEEEEeCCCcEEEEEC
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCE-----GVSKNVVEVGFQE--DGKWMFTGGEDCRARIWDL   86 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~-----~~~~~i~~~~~sp--~~~~l~~~~~~~~i~l~d~   86 (148)
                      ..++.|.|+  +..+++ -.|..|.+|+++... +.+..+.     .+....++-+|+|  +|..+++. .+++++.||+
T Consensus       126 i~cvew~Pn--s~klas-m~dn~i~l~~l~ess-~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt-~d~tl~~~D~  200 (370)
T KOG1007|consen  126 INCVEWEPN--SDKLAS-MDDNNIVLWSLDESS-KIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATT-SDSTLQFWDL  200 (370)
T ss_pred             eeeEEEcCC--CCeeEE-eccCceEEEEcccCc-chheeecccccccccceecccccCCCCccceEEEe-CCCcEEEEEc
Confidence            478899996  777777 679999999998872 2132221     2456678889998  56666555 5889999999


Q ss_pred             Ccc-----cc----ccceEEEEccCCC-EEEEEecCCceecCeeEEEeecCCCccee
Q psy7062          87 SLC-----FI----QQVNALRITPDKQ-LLASAEELSCCYCGAAVFVYNSCYPAAVV  133 (148)
Q Consensus        87 ~~~-----~~----~~i~~~~~sp~~~-~l~~~~~d~~~~~~~~i~~~d~~~~~~~~  133 (148)
                      ++.     +.    +.+..+.|+|+.+ +|++++.||      .|++||.+..+.+.
T Consensus       201 RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdg------yvriWD~R~tk~pv  251 (370)
T KOG1007|consen  201 RTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDG------YVRIWDTRKTKFPV  251 (370)
T ss_pred             cchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCc------cEEEEeccCCCccc
Confidence            987     22    7799999999887 667777777      89999999876544

>KOG0644|consensus

Probab=99.13  E-value=5.8e-11  Score=91.62  Aligned_cols=99  Identities=13%  Similarity=0.331  Sum_probs=89.2

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----   89 (148)
                      -|++||..  |.++.+|++|..+++|..++.  ..+..+.+|...|+.++++.+...+++++.|..|++|.++.+     
T Consensus       194 yca~fDrt--g~~Iitgsdd~lvKiwS~et~--~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~pvsv  269 (1113)
T KOG0644|consen  194 YCAIFDRT--GRYIITGSDDRLVKIWSMETA--RCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGAPVSV  269 (1113)
T ss_pred             eeeeeccc--cceEeecCccceeeeeeccch--hhhccCCCCccccchhccchhhhhhhhcccCceEEEEecCCCchHHH
Confidence            35667776  999999999999999999998  999999999999999999999999999999999999999988     


Q ss_pred             cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          90 FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        90 ~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                      +.   +.|++++|+|-.    +.+.||      ++++||.+
T Consensus       270 LrghtgavtaiafsP~~----sss~dg------t~~~wd~r  300 (1113)
T KOG0644|consen  270 LRGHTGAVTAIAFSPRA----SSSDDG------TCRIWDAR  300 (1113)
T ss_pred             HhccccceeeeccCccc----cCCCCC------ceEecccc
Confidence            32   889999999965    667777      99999987

>KOG0301|consensus

Probab=99.13  E-value=1.4e-09  Score=82.47  Aligned_cols=93  Identities=15%  Similarity=0.277  Sum_probs=79.5

Q ss_pred             cEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc-ccceEEEE
Q psy7062          26 EMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI-QQVNALRI   99 (148)
Q Consensus        26 ~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~-~~i~~~~~   99 (148)
                      .-++++++||.|++|++. +  +.+..+.+|+..+++++..+++..++++++|+++++|+...-     ++ ..+|++.+
T Consensus       191 ~~flScsNDg~Ir~w~~~-g--e~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~e~~q~I~lPttsiWsa~~  267 (745)
T KOG0301|consen  191 SHFLSCSNDGSIRLWDLD-G--EVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKDECVQVITLPTTSIWSAKV  267 (745)
T ss_pred             CCeEeecCCceEEEEecc-C--ceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeecCceEEEEecCccceEEEEE
Confidence            346788999999999994 4  689999999999999998899999999999999999998754     33 68999998


Q ss_pred             ccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062         100 TPDKQLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus       100 sp~~~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                      -++|.. ++|+.||      .|++|....
T Consensus       268 L~NgDI-vvg~SDG------~VrVfT~~k  289 (745)
T KOG0301|consen  268 LLNGDI-VVGGSDG------RVRVFTVDK  289 (745)
T ss_pred             eeCCCE-EEeccCc------eEEEEEecc
Confidence            888884 6777778      899998763

>KOG1408|consensus

Probab=99.12  E-value=6.4e-10  Score=84.96  Aligned_cols=105  Identities=15%  Similarity=0.177  Sum_probs=87.3

Q ss_pred             EEEEEeCCCCccEEEEEe--cCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeC--CCcEEEEECCcc-
Q psy7062          15 ISTVFDSKHLVEMVAALG--GYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE--DCRARIWDLSLC-   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~--~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~--~~~i~l~d~~~~-   89 (148)
                      .++||+++  |+++++|-  ....+++|++...  ..+..+..|+-.+++++|+|.++++++.+.  |..+.+||++.. 
T Consensus        82 t~vAfS~~--GryvatGEcG~~pa~kVw~la~h--~vVAEfvdHKY~vtcvaFsp~~kyvvSVGsQHDMIVnv~dWr~N~  157 (1080)
T KOG1408|consen   82 TCVAFSQN--GRYVATGECGRTPASKVWSLAFH--GVVAEFVDHKYNVTCVAFSPGNKYVVSVGSQHDMIVNVNDWRVNS  157 (1080)
T ss_pred             eEEEEcCC--CcEEEecccCCCccceeeeeccc--cchhhhhhccccceeeeecCCCcEEEeeccccceEEEhhhhhhcc
Confidence            58888888  99999944  2337999999988  788999999999999999999999998765  567889999866 


Q ss_pred             ------ccccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 ------FIQQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 ------~~~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                            +...+..++|+.+|.++++++       ...|++|.+...+
T Consensus       158 ~~asnkiss~Vsav~fsEdgSYfvT~g-------nrHvk~wyl~~~~  197 (1080)
T KOG1408|consen  158 SGASNKISSVVSAVAFSEDGSYFVTSG-------NRHVKLWYLQIQS  197 (1080)
T ss_pred             cccccccceeEEEEEEccCCceeeeee-------eeeEEEEEeeccc
Confidence                  128899999999999988876       2289999987554

>KOG2055|consensus

Probab=99.11  E-value=3.6e-09  Score=77.06  Aligned_cols=113  Identities=17%  Similarity=0.249  Sum_probs=89.4

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCC-EEEEEeCCCcEEEEECCcc--
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGK-WMFTGGEDCRARIWDLSLC--   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~~~~~i~l~d~~~~--   89 (148)
                      +..++.|+|.  ..+|.+|+.|+++++|.++......+..+.-....|.+..|.|+|. .+++++....++.||+.+.  
T Consensus       215 ~I~sv~FHp~--~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~  292 (514)
T KOG2055|consen  215 GITSVQFHPT--APLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKV  292 (514)
T ss_pred             CceEEEecCC--CceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeecccccc
Confidence            4578888887  7899999999999999998764455555555567788888888887 7777777778888888654  


Q ss_pred             ------------------------------------------------cc--ccceEEEEccCCCEEEEEecCCceecCe
Q psy7062          90 ------------------------------------------------FI--QQVNALRITPDKQLLASAEELSCCYCGA  119 (148)
Q Consensus        90 ------------------------------------------------~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~  119 (148)
                                                                      +.  +.+..+.|+.+++.|+..+.+|      
T Consensus       293 ~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~KieG~v~~~~fsSdsk~l~~~~~~G------  366 (514)
T KOG2055|consen  293 TKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFKIEGVVSDFTFSSDSKELLASGGTG------  366 (514)
T ss_pred             ccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheeeeccEEeeEEEecCCcEEEEEcCCc------
Confidence                                                            11  7788899999999998888877      


Q ss_pred             eEEEeecCCCccee
Q psy7062         120 AVFVYNSCYPAAVV  133 (148)
Q Consensus       120 ~i~~~d~~~~~~~~  133 (148)
                      .|.+||++......
T Consensus       367 eV~v~nl~~~~~~~  380 (514)
T KOG2055|consen  367 EVYVWNLRQNSCLH  380 (514)
T ss_pred             eEEEEecCCcceEE
Confidence            89999999775543

>KOG0307|consensus

Probab=99.10  E-value=2.5e-10  Score=90.14  Aligned_cols=109  Identities=15%  Similarity=0.289  Sum_probs=90.7

Q ss_pred             EEEEEeCCCCccEEEEEecCC--eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCC-CEEEEEeCCCcEEEEECCcc--
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQ--HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDG-KWMFTGGEDCRARIWDLSLC--   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~--~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~-~~l~~~~~~~~i~l~d~~~~--   89 (148)
                      ..++|+|+...+++++..+|+  .|.+||++.. ..+++.+++|...|.+++||+.+ .+++++++|+.+.+|+.+++  
T Consensus       210 S~l~WhP~~aTql~~As~dd~~PviqlWDlR~a-ssP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEv  288 (1049)
T KOG0307|consen  210 SVLAWHPDHATQLLVASGDDSAPVIQLWDLRFA-SSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEV  288 (1049)
T ss_pred             eeeeeCCCCceeeeeecCCCCCceeEeeccccc-CCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceE
Confidence            478999998887777744444  6999999875 25788889999999999999955 89999999999999999997  


Q ss_pred             ---cc---ccceEEEEccC-CCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 ---FI---QQVNALRITPD-KQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 ---~~---~~i~~~~~sp~-~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                         +.   .+++.+.|.|. ...++.++.||      +|.+|.+....
T Consensus       289 l~~~p~~~nW~fdv~w~pr~P~~~A~asfdg------kI~I~sl~~~~  330 (1049)
T KOG0307|consen  289 LGELPAQGNWCFDVQWCPRNPSVMAAASFDG------KISIYSLQGTD  330 (1049)
T ss_pred             eeecCCCCcceeeeeecCCCcchhhhheecc------ceeeeeeecCC
Confidence               33   78999999995 45888899988      89999877543

>KOG3881|consensus

Probab=99.10  E-value=2.5e-09  Score=76.34  Aligned_cols=105  Identities=17%  Similarity=0.271  Sum_probs=91.8

Q ss_pred             CCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc------cc---
Q psy7062          21 SKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC------FI---   91 (148)
Q Consensus        21 ~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~------~~---   91 (148)
                      +......||+++..+.+++||.+.+ .+++.++.--...++++..-|+++.++++..-+.+..||++.+      |.   
T Consensus       212 ~g~~~~~fat~T~~hqvR~YDt~~q-RRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~t  290 (412)
T KOG3881|consen  212 EGSPNYKFATITRYHQVRLYDTRHQ-RRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGIT  290 (412)
T ss_pred             CCCCCceEEEEecceeEEEecCccc-CcceeEeccccCcceeeeecCCCcEEEEecccchhheecccCceeeccccCCcc
Confidence            3333678899999999999999976 4788888877889999999999999999999999999999988      33   


Q ss_pred             ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062          92 QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV  132 (148)
Q Consensus        92 ~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~  132 (148)
                      +.+.++..+|.++++++++-|+      .++++|+.+....
T Consensus       291 Gsirsih~hp~~~~las~GLDR------yvRIhD~ktrkll  325 (412)
T KOG3881|consen  291 GSIRSIHCHPTHPVLASCGLDR------YVRIHDIKTRKLL  325 (412)
T ss_pred             CCcceEEEcCCCceEEeeccce------eEEEeecccchhh
Confidence            8899999999999999999988      8999999875443

>KOG0270|consensus

Probab=99.07  E-value=4.3e-09  Score=76.22  Aligned_cols=116  Identities=14%  Similarity=0.203  Sum_probs=90.4

Q ss_pred             eecC-cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccC-CCEEEEEeCCCcEEEEECC
Q psy7062          10 TAFG-QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQED-GKWMFTGGEDCRARIWDLS   87 (148)
Q Consensus        10 ~~~~-~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~-~~~l~~~~~~~~i~l~d~~   87 (148)
                      ++.+ ...++|++... ..++++..||+++-+|++.. .+++.++++|...|.++++++. ..++.+++.++.+++|++.
T Consensus       327 k~~g~VEkv~w~~~se-~~f~~~tddG~v~~~D~R~~-~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~  404 (463)
T KOG0270|consen  327 KFDGEVEKVAWDPHSE-NSFFVSTDDGTVYYFDIRNP-GKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFD  404 (463)
T ss_pred             EeccceEEEEecCCCc-eeEEEecCCceEEeeecCCC-CCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeec
Confidence            4444 57889998754 44455499999999999986 4889999999999999999985 5578889999999999996


Q ss_pred             cc---------cc-ccceEEEEccCCC-EEEEEecCCceecCeeEEEeecCCCccee
Q psy7062          88 LC---------FI-QQVNALRITPDKQ-LLASAEELSCCYCGAAVFVYNSCYPAAVV  133 (148)
Q Consensus        88 ~~---------~~-~~i~~~~~sp~~~-~l~~~~~d~~~~~~~~i~~~d~~~~~~~~  133 (148)
                      .-         +. ++..|+++.|+-. .++.|+..+      .+++||+.+..++.
T Consensus       405 ~~~~~~v~~~~~~~~rl~c~~~~~~~a~~la~GG~k~------~~~vwd~~~~~~V~  455 (463)
T KOG0270|consen  405 VDSPKSVKEHSFKLGRLHCFALDPDVAFTLAFGGEKA------VLRVWDIFTNSPVR  455 (463)
T ss_pred             CCCCcccccccccccceeecccCCCcceEEEecCccc------eEEEeecccChhHH
Confidence            43         33 7788889988766 455555533      79999988765443

>KOG1538|consensus

Probab=99.06  E-value=2.9e-09  Score=81.02  Aligned_cols=97  Identities=21%  Similarity=0.220  Sum_probs=81.8

Q ss_pred             cCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--
Q psy7062          12 FGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--   89 (148)
Q Consensus        12 ~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--   89 (148)
                      +....++|.|+  |..|+. ..++.+.+||.+.+  ..+.++++|...|.+++|+.||+.+++|+.|..+.+|.-+..  
T Consensus        13 hci~d~afkPD--GsqL~l-AAg~rlliyD~ndG--~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~   87 (1081)
T KOG1538|consen   13 HCINDIAFKPD--GTQLIL-AAGSRLLVYDTSDG--TLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGI   87 (1081)
T ss_pred             cchheeEECCC--CceEEE-ecCCEEEEEeCCCc--ccccccccccceEEEEEEccCCceeccCCCceeEEEecccccce
Confidence            35677889998  444555 34678999999998  889999999999999999999999999999999999987532  


Q ss_pred             ----------------------------cc---------------ccceEEEEccCCCEEEEEecCC
Q psy7062          90 ----------------------------FI---------------QQVNALRITPDKQLLASAEELS  113 (148)
Q Consensus        90 ----------------------------~~---------------~~i~~~~~sp~~~~l~~~~~d~  113 (148)
                                                  |.               .++.+.+|+-||++++.|-.+|
T Consensus        88 LkYSH~D~IQCMsFNP~~h~LasCsLsdFglWS~~qK~V~K~kss~R~~~CsWtnDGqylalG~~nG  154 (1081)
T KOG1538|consen   88 LKYSHNDAIQCMSFNPITHQLASCSLSDFGLWSPEQKSVSKHKSSSRIICCSWTNDGQYLALGMFNG  154 (1081)
T ss_pred             eeeccCCeeeEeecCchHHHhhhcchhhccccChhhhhHHhhhhheeEEEeeecCCCcEEEEeccCc
Confidence                                        10               6788889999999999998888

>KOG0650|consensus

Probab=99.06  E-value=1e-08  Score=77.02  Aligned_cols=119  Identities=8%  Similarity=0.051  Sum_probs=83.0

Q ss_pred             ccceeeecCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCC-EEEEEeCCCcEEE
Q psy7062           5 LGGILTAFGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGK-WMFTGGEDCRARI   83 (148)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~~~~~i~l   83 (148)
                      .+-+++.+.....+.+.+..|+.|++|+.||++++|.+.++  +++++++ ..+.|.+++|+|.+. .++.......+.+
T Consensus       392 ~~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~Tg--Rcvr~~~-~d~~I~~vaw~P~~~~~vLAvA~~~~~~i  468 (733)
T KOG0650|consen  392 CALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATG--RCVRTVQ-FDSEIRSVAWNPLSDLCVLAVAVGECVLI  468 (733)
T ss_pred             eeeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecc--eEEEEEe-ecceeEEEEecCCCCceeEEEEecCceEE
Confidence            34455555544444444445999999999999999999999  9999887 577899999999776 3333332222332


Q ss_pred             EECCcc-------------------------------------------cc--ccceEEEEccCCCEEEEEecCCceecC
Q psy7062          84 WDLSLC-------------------------------------------FI--QQVNALRITPDKQLLASAEELSCCYCG  118 (148)
Q Consensus        84 ~d~~~~-------------------------------------------~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~  118 (148)
                      -+..-+                                           +.  ..|..+.||..|.+|++...++   ..
T Consensus       469 vnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~---~~  545 (733)
T KOG0650|consen  469 VNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDS---GN  545 (733)
T ss_pred             eCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCC---Cc
Confidence            222111                                           01  6688899999999999998766   45


Q ss_pred             eeEEEeecCCC
Q psy7062         119 AAVFVYNSCYP  129 (148)
Q Consensus       119 ~~i~~~d~~~~  129 (148)
                      ..|.+.++...
T Consensus       546 ~~VliHQLSK~  556 (733)
T KOG0650|consen  546 KSVLIHQLSKR  556 (733)
T ss_pred             ceEEEEecccc
Confidence            67888887744

>KOG2445|consensus

Probab=99.06  E-value=7.8e-09  Score=72.08  Aligned_cols=113  Identities=14%  Similarity=0.129  Sum_probs=84.1

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCC-------CceEEecCCCCCEEEEEEccC--CCEEEEEeCCCcEEEE
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNP-------NPVINCEGVSKNVVEVGFQED--GKWMFTGGEDCRARIW   84 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~-------~~~~~~~~~~~~i~~~~~sp~--~~~l~~~~~~~~i~l~   84 (148)
                      .-.++|.++..|+.+|+++.|+++.+|.-...+.       ....++....+.|+.++|+|.  |-.+++++.||.+|+|
T Consensus        62 i~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIY  141 (361)
T KOG2445|consen   62 IWRVVWAHPEFGQVVATCSYDRTVSIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIY  141 (361)
T ss_pred             EEEEEecCccccceEEEEecCCceeeeeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEE
Confidence            3467788888999999999999999998732211       123445556788999999994  6688999999999999


Q ss_pred             ECCcc-------cc--------------ccceEEEEcc---CCCEEEEEecCCceecCeeEEEeecC
Q psy7062          85 DLSLC-------FI--------------QQVNALRITP---DKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        85 d~~~~-------~~--------------~~i~~~~~sp---~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                      +....       ++              .+..|+.|+|   ..+.|+.|+.+ .....++++||...
T Consensus       142 EA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e-~a~~~~~~~Iye~~  207 (361)
T KOG2445|consen  142 EAPDPMNLSQWTLQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDE-DAPHLNKVKIYEYN  207 (361)
T ss_pred             ecCCccccccchhhhhhhhccCCcccccCcceEEeeccccccCceEEEEccc-CCccccceEEEEec
Confidence            99776       11              6788999998   45688888765 22333467777643

>KOG2048|consensus

Probab=99.06  E-value=5.1e-09  Score=79.16  Aligned_cols=106  Identities=15%  Similarity=0.170  Sum_probs=78.1

Q ss_pred             CCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---c-------
Q psy7062          21 SKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---F-------   90 (148)
Q Consensus        21 ~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---~-------   90 (148)
                      ....+..++.||+||.+..++.........+.+.-.++++.+++|+|++..+++|+.||.|++||..++   .       
T Consensus       118 i~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d  197 (691)
T KOG2048|consen  118 INPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLD  197 (691)
T ss_pred             eCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEEEEcCCCceEEEeeeccc
Confidence            334478888889999887777776622222334335689999999999999999999999999999987   1       


Q ss_pred             --c----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCccee
Q psy7062          91 --I----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVV  133 (148)
Q Consensus        91 --~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~  133 (148)
                        .    .-+|++.|-.++ .|++|...|      +|++||....+..+
T Consensus       198 ~l~k~~~~iVWSv~~Lrd~-tI~sgDS~G------~V~FWd~~~gTLiq  239 (691)
T KOG2048|consen  198 RLSKREPTIVWSVLFLRDS-TIASGDSAG------TVTFWDSIFGTLIQ  239 (691)
T ss_pred             ccccCCceEEEEEEEeecC-cEEEecCCc------eEEEEcccCcchhh
Confidence              1    335666655444 578887766      99999987665543

>KOG1272|consensus

Probab=99.04  E-value=5.8e-10  Score=81.24  Aligned_cols=110  Identities=8%  Similarity=0.043  Sum_probs=94.8

Q ss_pred             EEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--c----
Q psy7062          17 TVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--F----   90 (148)
Q Consensus        17 ~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--~----   90 (148)
                      +.|-|-  --+|++++..|.++.-|+.++  +.+..+..-.+.+..++-+|-...+-+|..+|++.+|...+.  +    
T Consensus       215 LeFLPy--HfLL~~~~~~G~L~Y~DVS~G--klVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~skePLvKiL  290 (545)
T KOG1272|consen  215 LEFLPY--HFLLVAASEAGFLKYQDVSTG--KLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKEPLVKIL  290 (545)
T ss_pred             hcccch--hheeeecccCCceEEEeechh--hhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCCCcchHHHHH
Confidence            344454  568899999999999999999  888888877788889999999999999999999999999887  2    


Q ss_pred             c--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062          91 I--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN  136 (148)
Q Consensus        91 ~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~  136 (148)
                      -  +++.++++.++|+++++++.|.      .+++||+++...+.++.
T Consensus       291 cH~g~V~siAv~~~G~YMaTtG~Dr------~~kIWDlR~~~ql~t~~  332 (545)
T KOG1272|consen  291 CHRGPVSSIAVDRGGRYMATTGLDR------KVKIWDLRNFYQLHTYR  332 (545)
T ss_pred             hcCCCcceEEECCCCcEEeeccccc------ceeEeeeccccccceee
Confidence            2  8999999999999999999988      99999999776555443

>KOG2139|consensus

Probab=99.04  E-value=8.8e-09  Score=73.29  Aligned_cols=103  Identities=16%  Similarity=0.183  Sum_probs=76.3

Q ss_pred             ccceeeecCc---EEEEEeCCCCccEEEEEe-cCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCc
Q psy7062           5 LGGILTAFGQ---ISTVFDSKHLVEMVAALG-GYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCR   80 (148)
Q Consensus         5 ~~~~~~~~~~---~~~~~~~~~~~~~l~~~~-~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~   80 (148)
                      ...+.+..++   ....|.++  |..+++++ .+..+.+||++++  ..+.....-...+..+.||||+.+++.++.|+.
T Consensus       186 ~~qvl~~pgh~pVtsmqwn~d--gt~l~tAS~gsssi~iWdpdtg--~~~pL~~~glgg~slLkwSPdgd~lfaAt~dav  261 (445)
T KOG2139|consen  186 HLQVLQDPGHNPVTSMQWNED--GTILVTASFGSSSIMIWDPDTG--QKIPLIPKGLGGFSLLKWSPDGDVLFAATCDAV  261 (445)
T ss_pred             chhheeCCCCceeeEEEEcCC--CCEEeecccCcceEEEEcCCCC--CcccccccCCCceeeEEEcCCCCEEEEecccce
Confidence            3445555554   34455565  78888877 4558999999998  333333234677889999999999999999999


Q ss_pred             EEEEECCcc-------cc-ccceEEEEccCCCEEEEEec
Q psy7062          81 ARIWDLSLC-------FI-QQVNALRITPDKQLLASAEE  111 (148)
Q Consensus        81 i~l~d~~~~-------~~-~~i~~~~~sp~~~~l~~~~~  111 (148)
                      .++|+....       +. +++...+|+|+|++|+.++.
T Consensus       262 frlw~e~q~wt~erw~lgsgrvqtacWspcGsfLLf~~s  300 (445)
T KOG2139|consen  262 FRLWQENQSWTKERWILGSGRVQTACWSPCGSFLLFACS  300 (445)
T ss_pred             eeeehhcccceecceeccCCceeeeeecCCCCEEEEEEc
Confidence            999976554       11 88999999999997766654

>KOG2106|consensus

Probab=99.04  E-value=1.5e-08  Score=74.85  Aligned_cols=101  Identities=16%  Similarity=0.240  Sum_probs=83.9

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---c
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---F   90 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---~   90 (148)
                      ..+.+|+|.  | .++.|...|...+.|.++.  . +.++......++.++|+|+|.+++.|+.|+.|.+|-+...   +
T Consensus       410 ~~~~~fhps--g-~va~Gt~~G~w~V~d~e~~--~-lv~~~~d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y  483 (626)
T KOG2106|consen  410 AECADFHPS--G-VVAVGTATGRWFVLDTETQ--D-LVTIHTDNEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKY  483 (626)
T ss_pred             eeEeeccCc--c-eEEEeeccceEEEEecccc--e-eEEEEecCCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEE
Confidence            467777786  6 8889899999999999886  3 3344334788999999999999999999999999988654   2


Q ss_pred             c-------ccceEEEEccCCCEEEEEecCCceecCeeEEEeec
Q psy7062          91 I-------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNS  126 (148)
Q Consensus        91 ~-------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~  126 (148)
                      .       ++|..+.|++|++++.+-+.|-      .|.+|..
T Consensus       484 ~r~~k~~gs~ithLDwS~Ds~~~~~~S~d~------eiLyW~~  520 (626)
T KOG2106|consen  484 SRVGKCSGSPITHLDWSSDSQFLVSNSGDY------EILYWKP  520 (626)
T ss_pred             EEeeeecCceeEEeeecCCCceEEeccCce------EEEEEcc
Confidence            1       8899999999999999988755      8999953

>KOG0321|consensus

Probab=99.04  E-value=1.1e-09  Score=82.43  Aligned_cols=109  Identities=10%  Similarity=0.187  Sum_probs=86.7

Q ss_pred             EEEEe-CCCCccEEEEEecCCeEEEEeCCCCCCC----ceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-
Q psy7062          16 STVFD-SKHLVEMVAALGGYQHIRMYDFGSNNPN----PVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-   89 (148)
Q Consensus        16 ~~~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~----~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-   89 (148)
                      +..|. ......+|+.+.++|.|.++|.+....+    .+..+..|...|..+.|-|....|++.+.|.++++||++.. 
T Consensus        54 ~~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~  133 (720)
T KOG0321|consen   54 ADSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSR  133 (720)
T ss_pred             cccccCCCCccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeeccce
Confidence            44554 3444788999999999999999865222    23455679999999999996668899999999999999876 


Q ss_pred             -------cc--ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 -------FI--QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 -------~~--~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                             +.  ..+.+++|+| +...|++|++||      .|.+||++...
T Consensus       134 l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg------~illWD~R~n~  178 (720)
T KOG0321|consen  134 LVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDG------EILLWDCRCNG  178 (720)
T ss_pred             eecceeecccccccchhhhccCCCcceeeccCCC------cEEEEEEeccc
Confidence                   22  7789999999 556888999988      99999988544

>KOG1274|consensus

Probab=99.03  E-value=9.5e-09  Score=80.06  Aligned_cols=112  Identities=13%  Similarity=0.159  Sum_probs=89.4

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---   89 (148)
                      +....++...  +..|++++.+++|.+|.+.++  ..-..+.-.+-.+..++++.+|++++.|+.|-.|++-+....   
T Consensus        56 g~~v~~ia~~--s~~f~~~s~~~tv~~y~fps~--~~~~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~  131 (933)
T KOG1274|consen   56 GELVSSIACY--SNHFLTGSEQNTVLRYKFPSG--EEDTILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQE  131 (933)
T ss_pred             CceeEEEeec--ccceEEeeccceEEEeeCCCC--CccceeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccchh
Confidence            3344555555  558888899999999999987  332222223556788999999999999999999999999876   


Q ss_pred             --cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceec
Q psy7062          90 --FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVA  134 (148)
Q Consensus        90 --~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~  134 (148)
                        +.   +++.++.|+|.+.+|++.+.||      .|++||+.+......
T Consensus       132 ~~lrgh~apVl~l~~~p~~~fLAvss~dG------~v~iw~~~~~~~~~t  175 (933)
T KOG1274|consen  132 KVLRGHDAPVLQLSYDPKGNFLAVSSCDG------KVQIWDLQDGILSKT  175 (933)
T ss_pred             eeecccCCceeeeeEcCCCCEEEEEecCc------eEEEEEcccchhhhh
Confidence              33   9999999999999999999998      999999986654433

>KOG4328|consensus

Probab=99.02  E-value=2.3e-09  Score=77.95  Aligned_cols=97  Identities=19%  Similarity=0.219  Sum_probs=79.0

Q ss_pred             CccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccC-CCEEEEEeCCCcEEEEECCcc----------cc-
Q psy7062          24 LVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQED-GKWMFTGGEDCRARIWDLSLC----------FI-   91 (148)
Q Consensus        24 ~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~-~~~l~~~~~~~~i~l~d~~~~----------~~-   91 (148)
                      ....++.+..-|...+||.++.+ .....+..|...|++++++|- ..++++++.|++.++||++..          +. 
T Consensus       290 e~~~vl~~~~~G~f~~iD~R~~~-s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~H  368 (498)
T KOG4328|consen  290 ESRSVLFGDNVGNFNVIDLRTDG-SEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPH  368 (498)
T ss_pred             CCccEEEeecccceEEEEeecCC-ccchhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecccc
Confidence            35556666777899999999872 335666778999999999995 558899999999999999865          12 


Q ss_pred             -ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          92 -QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        92 -~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                       ..|.+..|||.+-.|++.+.|.      .|++||..
T Consensus       369 rrsV~sAyFSPs~gtl~TT~~D~------~IRv~dss  399 (498)
T KOG4328|consen  369 RRSVNSAYFSPSGGTLLTTCQDN------EIRVFDSS  399 (498)
T ss_pred             cceeeeeEEcCCCCceEeeccCC------ceEEeecc
Confidence             6789999999776699999877      89999974

>KOG2106|consensus

Probab=98.99  E-value=1.2e-08  Score=75.29  Aligned_cols=100  Identities=15%  Similarity=0.244  Sum_probs=82.3

Q ss_pred             EEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--cc--
Q psy7062          16 STVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--FI--   91 (148)
Q Consensus        16 ~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--~~--   91 (148)
                      .++.+|+  .+++++++.|+.+++|+ + .  +.+.+.. ......+++|+|.| .++.|...|...+.|.++.  +.  
T Consensus       373 gla~hps--~~q~~T~gqdk~v~lW~-~-~--k~~wt~~-~~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~lv~~~  444 (626)
T KOG2106|consen  373 GLATHPS--KNQLLTCGQDKHVRLWN-D-H--KLEWTKI-IEDPAECADFHPSG-VVAVGTATGRWFVLDTETQDLVTIH  444 (626)
T ss_pred             eEEcCCC--hhheeeccCcceEEEcc-C-C--ceeEEEE-ecCceeEeeccCcc-eEEEeeccceEEEEecccceeEEEE
Confidence            3444555  78889999999999999 2 2  4555543 46667899999999 9999999999999999988  22  


Q ss_pred             ---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          92 ---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        92 ---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                         .++.+++|+|+|.+|+.|+.|+      .|++|-+...
T Consensus       445 ~d~~~ls~v~ysp~G~~lAvgs~d~------~iyiy~Vs~~  479 (626)
T KOG2106|consen  445 TDNEQLSVVRYSPDGAFLAVGSHDN------HIYIYRVSAN  479 (626)
T ss_pred             ecCCceEEEEEcCCCCEEEEecCCC------eEEEEEECCC
Confidence               8899999999999999999988      8888876644

>KOG4227|consensus

Probab=98.98  E-value=1e-08  Score=73.81  Aligned_cols=109  Identities=15%  Similarity=0.173  Sum_probs=89.4

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCC----CCceEEecC-CCCCEEEEEEccCCCEEEEEeCCCcEEEEECCc
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNN----PNPVINCEG-VSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSL   88 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~----~~~~~~~~~-~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~   88 (148)
                      .+++-|+.+  ++.|++|+.|..+++|+++...    ++++..... |.+.|.+++|......+++|..++++.+.|+.+
T Consensus        59 iNAlqFS~N--~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HDiEt  136 (609)
T KOG4227|consen   59 INALQFSHN--DRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKHDIET  136 (609)
T ss_pred             cceeeeccC--CeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeEeeeccc
Confidence            456666666  9999999999999999996421    144444432 558999999999999999999999999999998


Q ss_pred             c-----cc-----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          89 C-----FI-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        89 ~-----~~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                      .     +.     +.+..+..+|-.+.|++.+.++      .|.+||++..+
T Consensus       137 ~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~------~V~~~D~Rd~~  182 (609)
T KOG4227|consen  137 KQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAK------LVSFIDNRDRQ  182 (609)
T ss_pred             ceeeeeecccCcccceeecccCCCCceEEEEecCc------eEEEEeccCCC
Confidence            7     22     6799999999888999999988      99999988654

>KOG1523|consensus

Probab=98.98  E-value=1.2e-08  Score=71.43  Aligned_cols=106  Identities=13%  Similarity=0.185  Sum_probs=89.3

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCC-CCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNN-PNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~-~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---   89 (148)
                      ..+-||..+  +..+|++.+...+.+|.....+ .+...+++.|...|++++|+|..+-|++++.|..-++|...++   
T Consensus        13 itchAwn~d--rt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~~W   90 (361)
T KOG1523|consen   13 ITCHAWNSD--RTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGGTW   90 (361)
T ss_pred             eeeeeecCC--CceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCCee
Confidence            567777777  8888997888899999998764 4677889999999999999999999999999999999999654   


Q ss_pred             ------cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          90 ------FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        90 ------~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                            +.  ....++.|+|.++.+++++...      .|.+|=.+
T Consensus        91 kptlvLlRiNrAAt~V~WsP~enkFAVgSgar------~isVcy~E  130 (361)
T KOG1523|consen   91 KPTLVLLRINRAATCVKWSPKENKFAVGSGAR------LISVCYYE  130 (361)
T ss_pred             ccceeEEEeccceeeEeecCcCceEEeccCcc------EEEEEEEe
Confidence                  22  7789999999999999999866      56666544

>KOG0290|consensus

Probab=98.97  E-value=1.5e-08  Score=70.25  Aligned_cols=97  Identities=23%  Similarity=0.403  Sum_probs=76.6

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCC----------------------------------------------C
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNN----------------------------------------------P   47 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~----------------------------------------------~   47 (148)
                      ...++|.. ...+++|+.+.||++|+||++...                                              .
T Consensus       199 V~DIaf~~-~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~  277 (364)
T KOG0290|consen  199 VYDIAFLK-GSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPC  277 (364)
T ss_pred             eeEEEecc-CccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCC
Confidence            34555555 447899999999999999997432                                              1


Q ss_pred             CceEEecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEECCcc-----------cc--ccceEEEEcc-CCCEEEEEec
Q psy7062          48 NPVINCEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIWDLSLC-----------FI--QQVNALRITP-DKQLLASAEE  111 (148)
Q Consensus        48 ~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d~~~~-----------~~--~~i~~~~~sp-~~~~l~~~~~  111 (148)
                      .++..+++|.+.|.+++|.| ....+++++.|...-+||+...           +.  +.|..+.|+| .+.+++.+..
T Consensus       278 tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPilay~a~~EVNqi~Ws~~~~Dwiai~~~  356 (364)
T KOG0290|consen  278 TPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPILAYTAGGEVNQIQWSSSQPDWIAICFG  356 (364)
T ss_pred             cceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCCCCchhhhhccceeeeeeecccCCCEEEEEec
Confidence            23455678999999999999 5668999999999999999765           11  8899999997 6778887764

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=98.96  E-value=4.4e-09  Score=51.96  Aligned_cols=38  Identities=26%  Similarity=0.596  Sum_probs=35.8

Q ss_pred             CceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEE
Q psy7062          48 NPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWD   85 (148)
Q Consensus        48 ~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d   85 (148)
                      +++..+.+|...|.+++|+|++..+++++.|+.+++||
T Consensus         2 ~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    2 KCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             eEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            46788999999999999999999999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG0322|consensus

Probab=98.95  E-value=1.8e-09  Score=73.87  Aligned_cols=70  Identities=26%  Similarity=0.405  Sum_probs=63.4

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEEC
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL   86 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~   86 (148)
                      |...+..-++  ++++|+++-|+.+|+|..++.  +++..++-|...|.+++|+|+...++.++.|.+|.+|++
T Consensus       253 Gv~gvrIRpD--~KIlATAGWD~RiRVyswrtl--~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL  322 (323)
T KOG0322|consen  253 GVSGVRIRPD--GKILATAGWDHRIRVYSWRTL--NPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL  322 (323)
T ss_pred             CccceEEccC--CcEEeecccCCcEEEEEeccC--CchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence            4445555566  999999999999999999999  899999999999999999999999999999999999997

>KOG0974|consensus

Probab=98.94  E-value=1.1e-08  Score=80.58  Aligned_cols=108  Identities=17%  Similarity=0.260  Sum_probs=88.7

Q ss_pred             cCcEEEEEe--CCCCccEEEEEecCCeEEEEeCCCCCCCceE-EecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCc
Q psy7062          12 FGQISTVFD--SKHLVEMVAALGGYQHIRMYDFGSNNPNPVI-NCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSL   88 (148)
Q Consensus        12 ~~~~~~~~~--~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~-~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~   88 (148)
                      .+|....|+  ...+|.++++.|+|+++++|++++.  +... ...+|+.++..+.+.|+  .+++++.|.+.++|+.+.
T Consensus       172 ~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~--~~~~~~~fgHsaRvw~~~~~~n--~i~t~gedctcrvW~~~~  247 (967)
T KOG0974|consen  172 KGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSR--EVLGCTGFGHSARVWACCFLPN--RIITVGEDCTCRVWGVNG  247 (967)
T ss_pred             cccCCceEEEEEccCCcEEEEEecCcceeeeecccc--cccCcccccccceeEEEEeccc--eeEEeccceEEEEEeccc
Confidence            344444444  3335999999999999999999998  5554 66689999999999998  899999999999997765


Q ss_pred             c----cc----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          89 C----FI----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        89 ~----~~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                      .    +.    ..++.++.+++...+++++.|+      .+++||+...
T Consensus       248 ~~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds------~lk~~~l~~r  290 (967)
T KOG0974|consen  248 TQLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDS------TLKLWDLNGR  290 (967)
T ss_pred             ceehhhhhhhhcceeEEEEcCCceEEEeeccCc------chhhhhhhcc
Confidence            5    22    7799999999999999999988      8999996643

>KOG1963|consensus

Probab=98.94  E-value=3.3e-08  Score=76.62  Aligned_cols=117  Identities=13%  Similarity=0.203  Sum_probs=91.6

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCC--CCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGS--NNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~--~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--   89 (148)
                      ..+.+++|.  +.++|++..||.|.+|.=-.  ........+.=|...|.+++|+++|.++++|+.++.+-+|.+.++  
T Consensus       208 ~t~~~~spn--~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~k  285 (792)
T KOG1963|consen  208 ITCVALSPN--ERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGKK  285 (792)
T ss_pred             ceeEEeccc--cceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecCCCc
Confidence            456778887  89999999999999994332  211223344447889999999999999999999999999999887  


Q ss_pred             --cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccCcc
Q psy7062          90 --FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTL  138 (148)
Q Consensus        90 --~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~~  138 (148)
                        |+   ++|..+.++||+...+....|.      +|.+....+......+++.
T Consensus       286 qfLPRLgs~I~~i~vS~ds~~~sl~~~DN------qI~li~~~dl~~k~tIsgi  333 (792)
T KOG1963|consen  286 QFLPRLGSPILHIVVSPDSDLYSLVLEDN------QIHLIKASDLEIKSTISGI  333 (792)
T ss_pred             ccccccCCeeEEEEEcCCCCeEEEEecCc------eEEEEeccchhhhhhccCc
Confidence              33   8999999999999988888877      8888887655544444433

>KOG2111|consensus

Probab=98.93  E-value=1.7e-08  Score=70.59  Aligned_cols=79  Identities=15%  Similarity=0.248  Sum_probs=63.2

Q ss_pred             eeeecCcEEEEEeCCCCccEEEEEecCCe-EEEEeCCCCCCCceEEec-C-CCCCEEEEEEccCCCEEEEEeCCCcEEEE
Q psy7062           8 ILTAFGQISTVFDSKHLVEMVAALGGYQH-IRMYDFGSNNPNPVINCE-G-VSKNVVEVGFQEDGKWMFTGGEDCRARIW   84 (148)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~l~~~~~d~~-v~~~d~~~~~~~~~~~~~-~-~~~~i~~~~~sp~~~~l~~~~~~~~i~l~   84 (148)
                      ++.+|.-...+...+..|.++|++|..|+ ||+||..++  ..+..++ + ....|++++|||+..+++..|..|++++|
T Consensus       176 ~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g--~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF  253 (346)
T KOG2111|consen  176 IINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDG--TLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIF  253 (346)
T ss_pred             EEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCC--cEeeeeecCCchheEEEEEeCCCccEEEEEcCCCeEEEE
Confidence            34555544444444444999999999997 999999999  7777765 2 35679999999999999999999999999


Q ss_pred             ECCc
Q psy7062          85 DLSL   88 (148)
Q Consensus        85 d~~~   88 (148)
                      .++.
T Consensus       254 ~l~~  257 (346)
T KOG2111|consen  254 SLRD  257 (346)
T ss_pred             Eeec
Confidence            9865

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=98.93  E-value=5e-08  Score=71.51  Aligned_cols=104  Identities=15%  Similarity=0.193  Sum_probs=76.6

Q ss_pred             ccEE-EEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc--ccceE
Q psy7062          25 VEMV-AALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI--QQVNA   96 (148)
Q Consensus        25 ~~~l-~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~--~~i~~   96 (148)
                      ++++ ++-..++.+.+.|..+.  +.+..+.........+.++|||++++..+.|+.+.++|+.+.     +.  .....
T Consensus         5 ~~l~~V~~~~~~~v~viD~~t~--~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~~~~~   82 (369)
T PF02239_consen    5 GNLFYVVERGSGSVAVIDGATN--KVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGGNPRG   82 (369)
T ss_dssp             GGEEEEEEGGGTEEEEEETTT---SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SSEEEE
T ss_pred             ccEEEEEecCCCEEEEEECCCC--eEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCCCcce
Confidence            4555 45456789999999998  888888755444566789999999999999999999999988     22  66788


Q ss_pred             EEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          97 LRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        97 ~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                      +++++||+++++++..     ...+.++|.++.+.+..+
T Consensus        83 i~~s~DG~~~~v~n~~-----~~~v~v~D~~tle~v~~I  116 (369)
T PF02239_consen   83 IAVSPDGKYVYVANYE-----PGTVSVIDAETLEPVKTI  116 (369)
T ss_dssp             EEE--TTTEEEEEEEE-----TTEEEEEETTT--EEEEE
T ss_pred             EEEcCCCCEEEEEecC-----CCceeEeccccccceeec
Confidence            9999999999988742     338999999887766544

...

>KOG1063|consensus

Probab=98.92  E-value=2.6e-08  Score=75.79  Aligned_cols=106  Identities=12%  Similarity=0.252  Sum_probs=83.5

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCC--CceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNP--NPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~--~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--   89 (148)
                      ..-++|+|+  +.+|++.|.|+++.+|.......  ......+.|+..|...+|+|++.+++|+|+|.++++|.....  
T Consensus       575 VT~l~FSpd--g~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~d  652 (764)
T KOG1063|consen  575 VTRLAFSPD--GRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDLRD  652 (764)
T ss_pred             EEEEEECCC--CcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCchh
Confidence            467888898  89999999999999999864311  112235679999999999999999999999999999998765  


Q ss_pred             --------cc--ccceEEEEcc-CC----CEEEEEecCCceecCeeEEEeecC
Q psy7062          90 --------FI--QQVNALRITP-DK----QLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        90 --------~~--~~i~~~~~sp-~~----~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                              ++  ..+..++|.| +.    ..++.|-+.|      .|.+|...
T Consensus       653 ~~i~~~a~~~~~~aVTAv~~~~~~~~e~~~~vavGle~G------eI~l~~~~  699 (764)
T KOG1063|consen  653 KYISRFACLKFSLAVTAVAYLPVDHNEKGDVVAVGLEKG------EIVLWRRK  699 (764)
T ss_pred             hhhhhhchhccCCceeeEEeeccccccccceEEEEeccc------EEEEEecc
Confidence                    11  7788888877 22    2667777766      89999844

>KOG1272|consensus

Probab=98.91  E-value=4.5e-09  Score=76.71  Aligned_cols=96  Identities=17%  Similarity=0.296  Sum_probs=78.8

Q ss_pred             eCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--cc-----c
Q psy7062          20 DSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--FI-----Q   92 (148)
Q Consensus        20 ~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--~~-----~   92 (148)
                      ..++.+-.+-+|...|+|.+|.....  +++..+.-|.+.|.++++.++|.+++|.+.|..+++||++..  +.     .
T Consensus       258 ~qNP~NaVih~GhsnGtVSlWSP~sk--ePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~tp~  335 (545)
T KOG1272|consen  258 KQNPYNAVIHLGHSNGTVSLWSPNSK--EPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRTPH  335 (545)
T ss_pred             hcCCccceEEEcCCCceEEecCCCCc--chHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeeccccccceeecCC
Confidence            34445778888889999999999988  888888889999999999999999999999999999999987  11     5


Q ss_pred             cceEEEEccCCCEEEEEecCCceecCeeEEEee
Q psy7062          93 QVNALRITPDKQLLASAEELSCCYCGAAVFVYN  125 (148)
Q Consensus        93 ~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d  125 (148)
                      +...+++|..|-..++-+.        .|.+|.
T Consensus       336 ~a~~ls~SqkglLA~~~G~--------~v~iw~  360 (545)
T KOG1272|consen  336 PASNLSLSQKGLLALSYGD--------HVQIWK  360 (545)
T ss_pred             CccccccccccceeeecCC--------eeeeeh
Confidence            6677788776654443333        789995

>KOG2110|consensus

Probab=98.87  E-value=2.3e-07  Score=66.11  Aligned_cols=72  Identities=13%  Similarity=0.273  Sum_probs=61.2

Q ss_pred             cEEEEEeCCCCccEEEEEecCCe-EEEEeCCCCCCCceEEec-C-CCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQH-IRMYDFGSNNPNPVINCE-G-VSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~-v~~~d~~~~~~~~~~~~~-~-~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~   89 (148)
                      ..+++|+++  |.+||++++.|+ ||+|.+.++  +.+.+|+ + ....|.+++|+|++.+|...+..++|++|.+...
T Consensus       176 lAalafs~~--G~llATASeKGTVIRVf~v~~G--~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~~  250 (391)
T KOG2110|consen  176 LAALAFSPD--GTLLATASEKGTVIRVFSVPEG--QKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFKLEKV  250 (391)
T ss_pred             eeEEEECCC--CCEEEEeccCceEEEEEEcCCc--cEeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEEEEEeccc
Confidence            357777777  999999999996 899999998  7888876 2 2457999999999999999999999999998643

>KOG0649|consensus

Probab=98.84  E-value=3.7e-08  Score=66.94  Aligned_cols=117  Identities=10%  Similarity=0.081  Sum_probs=81.4

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCC----CCceEE--ecCC-----CCCEEEEEEccCCCEEEEEeCCCcEE
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNN----PNPVIN--CEGV-----SKNVVEVGFQEDGKWMFTGGEDCRAR   82 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~----~~~~~~--~~~~-----~~~i~~~~~sp~~~~l~~~~~~~~i~   82 (148)
                      +...+|+-.....+|.+ +.||.|+-|.-+..-    .+.+..  ...|     -..|+++.+.|..+-++.++.|+.++
T Consensus        61 hdgpiy~~~f~d~~Lls-~gdG~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y  139 (325)
T KOG0649|consen   61 HDGPIYYLAFHDDFLLS-GGDGLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIY  139 (325)
T ss_pred             cCCCeeeeeeehhheee-ccCceEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEE
Confidence            33444443233567778 557999999775431    011111  1112     25789999999777777777899999


Q ss_pred             EEECCcc-----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccCc
Q psy7062          83 IWDLSLC-----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNT  137 (148)
Q Consensus        83 l~d~~~~-----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~  137 (148)
                      .||++++     |.   ..+.++.--.....+++|++||      ++++||.++.+.+..++.
T Consensus       140 ~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDG------tvRvWd~kt~k~v~~ie~  196 (325)
T KOG0649|consen  140 QVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSGAEDG------TVRVWDTKTQKHVSMIEP  196 (325)
T ss_pred             EEEecCCEEEEEEcCCcceeeeeeecccCcceeecCCCc------cEEEEeccccceeEEecc
Confidence            9999998     33   7788888755566789999999      999999999887665543

>KOG1240|consensus

Probab=98.84  E-value=1.4e-07  Score=75.89  Aligned_cols=108  Identities=8%  Similarity=0.144  Sum_probs=82.8

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCC-----ceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----------
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPN-----PVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----------   89 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~-----~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----------   89 (148)
                      +.++++||.||+|++||.+.--..     ..-++.-....+..+..++.+..++.++.||.+++.++...          
T Consensus      1061 ~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ 1140 (1431)
T KOG1240|consen 1061 TSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVSTKDGSVRVLRIDHYNVSKRVATQV 1140 (1431)
T ss_pred             CceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEEcCCCeEEEEEccccccccceeeee
Confidence            789999999999999999743111     12223224577888888999999999999999998888651          


Q ss_pred             ------------------------------------------------cc-----ccceEEEEccCCCEEEEEecCCcee
Q psy7062          90 ------------------------------------------------FI-----QQVNALRITPDKQLLASAEELSCCY  116 (148)
Q Consensus        90 ------------------------------------------------~~-----~~i~~~~~sp~~~~l~~~~~d~~~~  116 (148)
                                                                      ++     +.+.+++.+|.+.+++.|+..|   
T Consensus      1141 ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~vTSi~idp~~~WlviGts~G--- 1217 (1431)
T KOG1240|consen 1141 RIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHGLVTSIVIDPWCNWLVIGTSRG--- 1217 (1431)
T ss_pred             ecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCccccceeEEEecCCceEEEEecCCc---
Confidence                                                            00     6788899999999999999866   


Q ss_pred             cCeeEEEeecCCCcceeccCcc
Q psy7062         117 CGAAVFVYNSCYPAAVVASNTL  138 (148)
Q Consensus       117 ~~~~i~~~d~~~~~~~~~~~~~  138 (148)
                         .+.+||++-..++..++.-
T Consensus      1218 ---~l~lWDLRF~~~i~sw~~P 1236 (1431)
T KOG1240|consen 1218 ---QLVLWDLRFRVPILSWEHP 1236 (1431)
T ss_pred             ---eEEEEEeecCceeecccCc
Confidence               8999999976666555433

>KOG0280|consensus

Probab=98.82  E-value=2e-08  Score=69.69  Aligned_cols=92  Identities=16%  Similarity=0.124  Sum_probs=71.1

Q ss_pred             eecCcEEEEEe---CCCCccEEEEEecCCeEEEEeCCCCCCCceEE-ecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEE
Q psy7062          10 TAFGQISTVFD---SKHLVEMVAALGGYQHIRMYDFGSNNPNPVIN-CEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIW   84 (148)
Q Consensus        10 ~~~~~~~~~~~---~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~-~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~   84 (148)
                      .+..|..-+|-   .....+++.+|++|+.+..||++.++ +.+.. .+.|+..|.+|.-+| .+.++++|+.|..|++|
T Consensus       160 ~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~-~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~  238 (339)
T KOG0280|consen  160 TWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPK-TFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVL  238 (339)
T ss_pred             cccccceeeeeeecccCCCceEEecCCCceEEEEEecCCc-ceeeecceeeecceEEEecCCCCCceEEEeccccceeee
Confidence            34445544552   22336899999999999999999552 44443 456899999998886 67899999999999999


Q ss_pred             ECCcc----cc----ccceEEEEccC
Q psy7062          85 DLSLC----FI----QQVNALRITPD  102 (148)
Q Consensus        85 d~~~~----~~----~~i~~~~~sp~  102 (148)
                      |.++.    +.    +.++.+.++|.
T Consensus       239 DtRnm~kPl~~~~v~GGVWRi~~~p~  264 (339)
T KOG0280|consen  239 DTRNMGKPLFKAKVGGGVWRIKHHPE  264 (339)
T ss_pred             ehhcccCccccCccccceEEEEecch
Confidence            99975    33    88999999994

>KOG1517|consensus

Probab=98.81  E-value=9.7e-08  Score=75.98  Aligned_cols=112  Identities=17%  Similarity=0.266  Sum_probs=86.9

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCC-ceEEecCCCCC--EEEEEEccCCC-EEEEEeCCCcEEEEECCcc-----cc----
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPN-PVINCEGVSKN--VVEVGFQEDGK-WMFTGGEDCRARIWDLSLC-----FI----   91 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~-~~~~~~~~~~~--i~~~~~sp~~~-~l~~~~~~~~i~l~d~~~~-----~~----   91 (148)
                      |+++++|..||++++||.+..... .+...+.|+..  |..+.+.+.|- .+++|+.+|.|++||++..     +.    
T Consensus      1221 gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~ 1300 (1387)
T KOG1517|consen 1221 GNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAH 1300 (1387)
T ss_pred             CceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeec
Confidence            799999999999999999876222 45666778877  99999999776 4999999999999999984     21    


Q ss_pred             ---c-cceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc--ceeccCcccCcce
Q psy7062          92 ---Q-QVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA--AVVASNTLVKPQV  143 (148)
Q Consensus        92 ---~-~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~~~  143 (148)
                         + ..+++..|++...+++|+. +      .|++|++....  .......++.+.+
T Consensus      1301 ~~yGs~lTal~VH~hapiiAsGs~-q------~ikIy~~~G~~l~~~k~n~~F~~q~~ 1351 (1387)
T KOG1517|consen 1301 WEYGSALTALTVHEHAPIIASGSA-Q------LIKIYSLSGEQLNIIKYNPGFMGQRI 1351 (1387)
T ss_pred             cccCccceeeeeccCCCeeeecCc-c------eEEEEecChhhhcccccCcccccCcC
Confidence               2 3899999999999999986 4      89999977432  2334444444443

>KOG0974|consensus

Probab=98.81  E-value=2e-07  Score=73.59  Aligned_cols=93  Identities=16%  Similarity=0.264  Sum_probs=80.6

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-------cc--ccce
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-------FI--QQVN   95 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-------~~--~~i~   95 (148)
                      .-++++|+.-+.+.+|+...- ..+. .+.+|.+.|..+.++.||.++++.|.|.++++|++.+.       |.  .+++
T Consensus       145 ~~~i~~gsv~~~iivW~~~~d-n~p~-~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw  222 (967)
T KOG0974|consen  145 ELYIASGSVFGEIIVWKPHED-NKPI-RLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVW  222 (967)
T ss_pred             EEEEEeccccccEEEEecccc-CCcc-eecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeE
Confidence            667888888899999999843 2333 56789999999999999999999999999999999887       33  8999


Q ss_pred             EEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          96 ALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        96 ~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                      .++|.|+  .+++++.|.      +.++|+..
T Consensus       223 ~~~~~~n--~i~t~gedc------tcrvW~~~  246 (967)
T KOG0974|consen  223 ACCFLPN--RIITVGEDC------TCRVWGVN  246 (967)
T ss_pred             EEEeccc--eeEEeccce------EEEEEecc
Confidence            9999999  899999988      99999654

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=98.81  E-value=3e-07  Score=66.33  Aligned_cols=109  Identities=12%  Similarity=0.196  Sum_probs=75.5

Q ss_pred             CcEEEEEeCCCCccEEEEEec-CCeEEEEeCCCC--CCCceEEecCC------CCCEEEEEEccCCCEEEEEeC-CCcEE
Q psy7062          13 GQISTVFDSKHLVEMVAALGG-YQHIRMYDFGSN--NPNPVINCEGV------SKNVVEVGFQEDGKWMFTGGE-DCRAR   82 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~-d~~v~~~d~~~~--~~~~~~~~~~~------~~~i~~~~~sp~~~~l~~~~~-~~~i~   82 (148)
                      ++..++|+++  +++++++.. +++|.+|+++..  ..+.+..+..+      ......+.++|++++++++.. ++.|.
T Consensus       176 ~p~~~~~~pd--g~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~  253 (330)
T PRK11028        176 GPRHMVFHPN--QQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLIS  253 (330)
T ss_pred             CCceEEECCC--CCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEE
Confidence            3567888887  788877665 789999999742  11222232211      123346889999999988765 68899


Q ss_pred             EEECCcc---c--c------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062          83 IWDLSLC---F--I------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        83 l~d~~~~---~--~------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                      +|++...   +  .      ...+.+.++|+|++|++++..     .++|.+|++..
T Consensus       254 v~~i~~~~~~~~~~~~~~~~~~p~~~~~~~dg~~l~va~~~-----~~~v~v~~~~~  305 (330)
T PRK11028        254 VFSVSEDGSVLSFEGHQPTETQPRGFNIDHSGKYLIAAGQK-----SHHISVYEIDG  305 (330)
T ss_pred             EEEEeCCCCeEEEeEEEeccccCCceEECCCCCEEEEEEcc-----CCcEEEEEEcC
Confidence            9998543   1  1      356789999999999988751     23899998753

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=98.81  E-value=3.4e-07  Score=65.88  Aligned_cols=107  Identities=22%  Similarity=0.385  Sum_probs=84.2

Q ss_pred             EEEEEeCCCCccEEEEEec-CCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCC-EEEEEeCCCcEEEEECCcc---
Q psy7062          15 ISTVFDSKHLVEMVAALGG-YQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGK-WMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~-d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~~~~~i~l~d~~~~---   89 (148)
                      ..++|.++  +..+++++. ++.+++|+....  ..+..+.+|...+.+++|+|++. .+++++.|+.+++||....   
T Consensus       159 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~~~  234 (466)
T COG2319         159 TSLAFSPD--GKLLASGSSLDGTIKLWDLRTG--KPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLL  234 (466)
T ss_pred             EEEEECCC--CCEEEecCCCCCceEEEEcCCC--ceEEeeccCCCceEEEEEcCCcceEEEEecCCCcEEEEECCCCcEE
Confidence            35677777  667788675 999999999986  78888888999999999999998 5566689999999988855   


Q ss_pred             c-c----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          90 F-I----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        90 ~-~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                      . .    .......|+|++..+++++.|+      .+++||......
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~------~~~~~~~~~~~~  275 (466)
T COG2319         235 RSTLSGHSDSVVSSFSPDGSLLASGSSDG------TIRLWDLRSSSS  275 (466)
T ss_pred             eeecCCCCcceeEeECCCCCEEEEecCCC------cEEEeeecCCCc
Confidence            1 1    1111227999998888888877      899999886554

>KOG1587|consensus

Probab=98.80  E-value=5.5e-08  Score=74.13  Aligned_cols=104  Identities=15%  Similarity=0.218  Sum_probs=81.0

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCC-CCCCCceEEecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEECCcc--
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFG-SNNPNPVINCEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIWDLSLC--   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~-~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d~~~~--   89 (148)
                      +.++.+.|-. ..++.+ +.|.++++|... ..  .++..+..+...+++++||| ....+++++.+|.+.+||+...  
T Consensus       401 v~~v~~nPF~-~k~fls-~gDW~vriWs~~~~~--~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~  476 (555)
T KOG1587|consen  401 VYAVSRNPFY-PKNFLS-VGDWTVRIWSEDVIA--SPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDE  476 (555)
T ss_pred             eEeeecCCCc-cceeee-eccceeEeccccCCC--CcchhhhhccceeeeeEEcCcCceEEEEEcCCCceehhhhhcccc
Confidence            3444444543 444555 449999999998 44  67777777778899999999 4568889999999999999765  


Q ss_pred             ---cc-----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          90 ---FI-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        90 ---~~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                         ..     .....+.|++.|+.|+.|...|      ++.+|++.
T Consensus       477 ~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G------~~~~~~l~  516 (555)
T KOG1587|consen  477 EPVLSQKVCSPALTRVRWSPNGKLLAVGDANG------TTHILKLS  516 (555)
T ss_pred             CCcccccccccccceeecCCCCcEEEEecCCC------cEEEEEcC
Confidence               11     5567788899999999999977      99999986

>KOG4227|consensus

Probab=98.79  E-value=1e-07  Score=68.76  Aligned_cols=108  Identities=10%  Similarity=0.077  Sum_probs=87.0

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCC---CCEEEEEEccCCCEEEEEeCCCcEEEEECCcc
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVS---KNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~---~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~   89 (148)
                      +..+++|+.-  +..+.+|..+++|.+.|+++.  +.+..+. |.   +.|+.+..+|-.+.+++.+.++.+.+||.+..
T Consensus       107 NIF~L~F~~~--N~~~~SG~~~~~VI~HDiEt~--qsi~V~~-~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~  181 (609)
T KOG4227|consen  107 NIFSLEFDLE--NRFLYSGERWGTVIKHDIETK--QSIYVAN-ENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDR  181 (609)
T ss_pred             ceEEEEEccC--CeeEecCCCcceeEeeecccc--eeeeeec-ccCcccceeecccCCCCceEEEEecCceEEEEeccCC
Confidence            3567777765  788999999999999999998  7777664 44   48999999999999999999999999999866


Q ss_pred             -------c-c---ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          90 -------F-I---QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        90 -------~-~---~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                             + .   .....+-|+| ...+|++.+..+      -+-+||.+.+..
T Consensus       182 ~~~~~~~~~AN~~~~F~t~~F~P~~P~Li~~~~~~~------G~~~~D~R~~~~  229 (609)
T KOG4227|consen  182 QNPISLVLPANSGKNFYTAEFHPETPALILVNSETG------GPNVFDRRMQAR  229 (609)
T ss_pred             CCCCceeeecCCCccceeeeecCCCceeEEeccccC------CCCceeeccccc
Confidence                   1 1   6678889999 456777777655      477999987654

>KOG2321|consensus

Probab=98.79  E-value=1.3e-07  Score=70.86  Aligned_cols=111  Identities=14%  Similarity=0.158  Sum_probs=90.1

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----   89 (148)
                      ...+|+. .+.+++++| ....|.-++++.+  +.+..+......+..+..++...++++|+.+|.+..||.+..     
T Consensus       137 RDm~y~~-~scDly~~g-sg~evYRlNLEqG--rfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~  212 (703)
T KOG2321|consen  137 RDMKYHK-PSCDLYLVG-SGSEVYRLNLEQG--RFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGT  212 (703)
T ss_pred             ccccccC-CCccEEEee-cCcceEEEEcccc--ccccccccccccceeeeecCccceEEecccCceEEEecchhhhhhee
Confidence            3444543 236777774 4566777799998  889999877889999999999999999999999999999876     


Q ss_pred             cc--------------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          90 FI--------------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        90 ~~--------------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                      +.              ..+.++.|+-+|-.+++|..+|      .+.|||++..++...-
T Consensus       213 l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G------~v~iyDLRa~~pl~~k  266 (703)
T KOG2321|consen  213 LDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTG------SVLIYDLRASKPLLVK  266 (703)
T ss_pred             eecccccCCCccccccCcceEEEecCCceeEEeeccCC------cEEEEEcccCCceeec
Confidence            11              3489999999999999999988      9999999987765433

>KOG1524|consensus

Probab=98.79  E-value=1.2e-07  Score=70.71  Aligned_cols=96  Identities=17%  Similarity=0.258  Sum_probs=71.4

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---   89 (148)
                      ...|++|+|+++ .. +. +..+.+.+-.+.-.  ..+...++|.+-|.+++|++....+++|+.|-..++||....   
T Consensus       147 ~v~c~~W~p~S~-~v-l~-c~g~h~~IKpL~~n--~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G~~Lf  221 (737)
T KOG1524|consen  147 SIRCARWAPNSN-SI-VF-CQGGHISIKPLAAN--SKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQGANLF  221 (737)
T ss_pred             eeEEEEECCCCC-ce-EE-ecCCeEEEeecccc--cceeEEeccCcEEEEeecCccccceeecCCceeEEeecccCcccc
Confidence            457999999853 33 33 33455666555544  445666789999999999999999999999999999998654   


Q ss_pred             -----------------------------cc----ccceEEEEccCCCEEEEEecCC
Q psy7062          90 -----------------------------FI----QQVNALRITPDKQLLASAEELS  113 (148)
Q Consensus        90 -----------------------------~~----~~i~~~~~sp~~~~l~~~~~d~  113 (148)
                                                   |.    +.|..++||+||.++++|+..|
T Consensus       222 ~S~~~ey~ITSva~npd~~~~v~S~nt~R~~~p~~GSifnlsWS~DGTQ~a~gt~~G  278 (737)
T KOG1524|consen  222 TSAAEEYAITSVAFNPEKDYLLWSYNTARFSSPRVGSIFNLSWSADGTQATCGTSTG  278 (737)
T ss_pred             cCChhccceeeeeeccccceeeeeeeeeeecCCCccceEEEEEcCCCceeeccccCc
Confidence                                         11    6677777888887777777666

>KOG1523|consensus

Probab=98.78  E-value=6.8e-08  Score=67.75  Aligned_cols=97  Identities=10%  Similarity=0.099  Sum_probs=79.8

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeC-CCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDF-GSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~-~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      .+++|++.  ++.+++++.|+.-.+|.. +.+.-++.-.+.-+....+++.|+|.++.+++|+....+.+|-.+..    
T Consensus        59 tgvdWap~--snrIvtcs~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWW  136 (361)
T KOG1523|consen   59 TGVDWAPK--SNRIVTCSHDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWW  136 (361)
T ss_pred             eEEeecCC--CCceeEccCCCCccccccCCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEeccccee
Confidence            56667776  788999999999999999 44423444444457889999999999999999999999999888765    


Q ss_pred             ----cc----ccceEEEEccCCCEEEEEecCC
Q psy7062          90 ----FI----QQVNALRITPDKQLLASAEELS  113 (148)
Q Consensus        90 ----~~----~~i~~~~~sp~~~~l~~~~~d~  113 (148)
                          +.    +-|.++.|+|++-.|+.|+.|+
T Consensus       137 VsKhikkPirStv~sldWhpnnVLlaaGs~D~  168 (361)
T KOG1523|consen  137 VSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDG  168 (361)
T ss_pred             hhhhhCCccccceeeeeccCCcceecccccCc
Confidence                11    6789999999999999999998

>KOG1310|consensus

Probab=98.77  E-value=2.9e-08  Score=74.11  Aligned_cols=109  Identities=17%  Similarity=0.245  Sum_probs=88.0

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCC--------CCceEEecCCCCCEEEEEEccCC-CEEEEEeCCCcEEE
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNN--------PNPVINCEGVSKNVVEVGFQEDG-KWMFTGGEDCRARI   83 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~--------~~~~~~~~~~~~~i~~~~~sp~~-~~l~~~~~~~~i~l   83 (148)
                      +..++.|-|..+.+++++|..|..|++||+...+        ......+.-|...|..++..|++ ..+.++++||+++-
T Consensus        95 NIFsvKFvP~tnnriv~sgAgDk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQ  174 (758)
T KOG1310|consen   95 NIFSVKFVPYTNNRIVLSGAGDKLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQ  174 (758)
T ss_pred             ceeEEeeeccCCCeEEEeccCcceEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceee
Confidence            3567777788889999999999999999998521        23455566689999999999987 79999999999999


Q ss_pred             EECCcc------------cc------ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeecC
Q psy7062          84 WDLSLC------------FI------QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        84 ~d~~~~------------~~------~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                      +|++..            +.      ....++..+| +..+|++|+.|.      ..++||.+
T Consensus       175 yDiREph~c~p~~~~~~~l~ny~~~lielk~ltisp~rp~~laVGgsdp------farLYD~R  231 (758)
T KOG1310|consen  175 YDIREPHVCNPDEDCPSILVNYNPQLIELKCLTISPSRPYYLAVGGSDP------FARLYDRR  231 (758)
T ss_pred             ecccCCccCCccccccHHHHHhchhhheeeeeeecCCCCceEEecCCCc------hhhhhhhh
Confidence            999875            11      5567888999 556888888876      88999954

>KOG1517|consensus

Probab=98.77  E-value=1.3e-07  Score=75.32  Aligned_cols=117  Identities=17%  Similarity=0.219  Sum_probs=83.2

Q ss_pred             ccceeeecCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEec-CCCCCEEEEEEc-cCCCEEEEEeCCCcEE
Q psy7062           5 LGGILTAFGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCE-GVSKNVVEVGFQ-EDGKWMFTGGEDCRAR   82 (148)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~-~~~~~i~~~~~s-p~~~~l~~~~~~~~i~   82 (148)
                      |.+.+.......+.++.......|+++++-..|++||....  .....+. +....++++.-+ +.|+.++.|-.||.++
T Consensus      1157 Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E--~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvR 1234 (1387)
T KOG1517|consen 1157 LSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKE--QVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVR 1234 (1387)
T ss_pred             ccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccc--eeEeecccCCCccceeecccccCCceEEEeecCCceE
Confidence            33444433333455564444555555476789999999876  5555444 345567777544 4579999999999999


Q ss_pred             EEECCcc--------cc-----ccceEEEEccCCC-EEEEEecCCceecCeeEEEeecCCC
Q psy7062          83 IWDLSLC--------FI-----QQVNALRITPDKQ-LLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        83 l~d~~~~--------~~-----~~i~~~~~sp~~~-~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                      +||.+..        ..     .+|..+.+-++|- .|++|+.+|      .|++||++.+
T Consensus      1235 vyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G------~I~~~DlR~~ 1289 (1387)
T KOG1517|consen 1235 VYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDG------DIQLLDLRMS 1289 (1387)
T ss_pred             EeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCC------eEEEEecccC
Confidence            9999876        11     4489999988664 699999988      9999999975

>KOG2315|consensus

Probab=98.77  E-value=4e-07  Score=67.98  Aligned_cols=109  Identities=11%  Similarity=0.170  Sum_probs=82.3

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC---CcEEEEECCcc-
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED---CRARIWDLSLC-   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~---~~i~l~d~~~~-   89 (148)
                      ..++.|++++..--++.|-.-..+-+||++..   ++..+.  .+.-.++-|+|.|++++.++.+   |.+-+||..+. 
T Consensus       273 Vhdv~W~~s~~EF~VvyGfMPAkvtifnlr~~---~v~df~--egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K  347 (566)
T KOG2315|consen  273 VHDVTWSPSGREFAVVYGFMPAKVTIFNLRGK---PVFDFP--EGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRK  347 (566)
T ss_pred             ceEEEECCCCCEEEEEEecccceEEEEcCCCC---EeEeCC--CCCccceEECCCCCEEEEeecCCCCCceEEEeccchh
Confidence            46788888743233334334458999999874   666664  5556778999999999888775   78999999887 


Q ss_pred             ----cc-ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          90 ----FI-QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        90 ----~~-~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                          +. ....-+.|+|||++++++.....++-.+-++||++.
T Consensus       348 ~i~~~~a~~tt~~eW~PdGe~flTATTaPRlrvdNg~Kiwhyt  390 (566)
T KOG2315|consen  348 LIAKFKAANTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYT  390 (566)
T ss_pred             hccccccCCceEEEEcCCCcEEEEEeccccEEecCCeEEEEec
Confidence                33 666778999999999999987655555569999976

>PRK05137 tolB translocation protein TolB; Provisional

Probab=98.76  E-value=7.2e-07  Score=66.81  Aligned_cols=108  Identities=11%  Similarity=0.123  Sum_probs=74.8

Q ss_pred             cEEEEEeCCCCccEEEEEec---CCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEE-EEeCCCc--EEEEECC
Q psy7062          14 QISTVFDSKHLVEMVAALGG---YQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMF-TGGEDCR--ARIWDLS   87 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~---d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~-~~~~~~~--i~l~d~~   87 (148)
                      ....+|+|+  |+.|+..+.   +..+.+||+.++  +. ..+..+...+...+|+|||+.++ +.+.++.  |++||+.
T Consensus       204 v~~p~wSpD--G~~lay~s~~~g~~~i~~~dl~~g--~~-~~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~  278 (435)
T PRK05137        204 VLTPRFSPN--RQEITYMSYANGRPRVYLLDLETG--QR-ELVGNFPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLR  278 (435)
T ss_pred             eEeeEECCC--CCEEEEEEecCCCCEEEEEECCCC--cE-EEeecCCCcccCcEECCCCCEEEEEEecCCCceEEEEECC
Confidence            346777887  666666553   358999999887  33 34444566677889999998764 5555554  7777887


Q ss_pred             cc----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          88 LC----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        88 ~~----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                      ++    +.   .......|+|||+.|+..+...   +...|+++|+...
T Consensus       279 ~~~~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~---g~~~Iy~~d~~g~  324 (435)
T PRK05137        279 SGTTTRLTDSPAIDTSPSYSPDGSQIVFESDRS---GSPQLYVMNADGS  324 (435)
T ss_pred             CCceEEccCCCCccCceeEcCCCCEEEEEECCC---CCCeEEEEECCCC
Confidence            76    32   3456789999999888776422   2347888887643

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=98.76  E-value=1.1e-06  Score=66.15  Aligned_cols=111  Identities=12%  Similarity=0.134  Sum_probs=79.4

Q ss_pred             eecCcEEEEEeCCCCccEEEEEe---cCC----eEEEEeCCCCCCCceE--EecCCCCCEEEEEEccCCCEEEEEeCCCc
Q psy7062          10 TAFGQISTVFDSKHLVEMVAALG---GYQ----HIRMYDFGSNNPNPVI--NCEGVSKNVVEVGFQEDGKWMFTGGEDCR   80 (148)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~l~~~~---~d~----~v~~~d~~~~~~~~~~--~~~~~~~~i~~~~~sp~~~~l~~~~~~~~   80 (148)
                      +-.++..+.|+.....++..+.-   .++    .-.+|++...+.+.+.  .+. .++.+.+.+++|+...++.|+.||.
T Consensus       204 TE~dPl~~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~r~klqrvsvtsip-L~s~v~~ca~sp~E~kLvlGC~DgS  282 (545)
T PF11768_consen  204 TENDPLDVEFSLNQPYQIHTVEQSISVKGEPSADSCIYECSRNKLQRVSVTSIP-LPSQVICCARSPSEDKLVLGCEDGS  282 (545)
T ss_pred             ecCCcEEEEccCCCCcEEEEEEEecCCCCCceeEEEEEEeecCceeEEEEEEEe-cCCcceEEecCcccceEEEEecCCe
Confidence            33345666776544444444321   123    3556777655222222  232 5778899999999999999999999


Q ss_pred             EEEEECCcc---cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          81 ARIWDLSLC---FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        81 i~l~d~~~~---~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                      +.+||...+   +.   -.+..++|||+|..+++++..|      .+.+||..
T Consensus       283 iiLyD~~~~~t~~~ka~~~P~~iaWHp~gai~~V~s~qG------elQ~FD~A  329 (545)
T PF11768_consen  283 IILYDTTRGVTLLAKAEFIPTLIAWHPDGAIFVVGSEQG------ELQCFDMA  329 (545)
T ss_pred             EEEEEcCCCeeeeeeecccceEEEEcCCCcEEEEEcCCc------eEEEEEee
Confidence            999999888   22   5578899999999999999866      89999966

>PRK01742 tolB translocation protein TolB; Provisional

Probab=98.74  E-value=5.4e-07  Score=67.39  Aligned_cols=92  Identities=15%  Similarity=0.126  Sum_probs=62.3

Q ss_pred             EEEEEeCCCCccEEEEEecC---CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEE-eCCCcEEE--EECCc
Q psy7062          15 ISTVFDSKHLVEMVAALGGY---QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTG-GEDCRARI--WDLSL   88 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d---~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~-~~~~~i~l--~d~~~   88 (148)
                      ...+|+|+  |+.|+..+.+   ..+.+||+.++..+.+..+.++   ....+|+|||+.++.+ +.++...+  ||+..
T Consensus       207 ~~p~wSPD--G~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~---~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~  281 (429)
T PRK01742        207 MSPAWSPD--GSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGH---NGAPAFSPDGSRLAFASSKDGVLNIYVMGANG  281 (429)
T ss_pred             ccceEcCC--CCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCc---cCceeECCCCCEEEEEEecCCcEEEEEEECCC
Confidence            56778887  7777775543   3699999988722233334333   3467999999988765 46776555  46655


Q ss_pred             c----cc---ccceEEEEccCCCEEEEEec
Q psy7062          89 C----FI---QQVNALRITPDKQLLASAEE  111 (148)
Q Consensus        89 ~----~~---~~i~~~~~sp~~~~l~~~~~  111 (148)
                      .    +.   .......|+|||+.|+.++.
T Consensus       282 ~~~~~lt~~~~~~~~~~wSpDG~~i~f~s~  311 (429)
T PRK01742        282 GTPSQLTSGAGNNTEPSWSPDGQSILFTSD  311 (429)
T ss_pred             CCeEeeccCCCCcCCEEECCCCCEEEEEEC
Confidence            4    22   45678999999998776653

>KOG2321|consensus

Probab=98.73  E-value=1.1e-07  Score=71.30  Aligned_cols=110  Identities=13%  Similarity=0.224  Sum_probs=82.6

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEec------CCC-----CCEEEEEEccCCCEEEEEeCCCcEEE
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCE------GVS-----KNVVEVGFQEDGKWMFTGGEDCRARI   83 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~------~~~-----~~i~~~~~sp~~~~l~~~~~~~~i~l   83 (148)
                      +++...+-  ..+|++|+.+|.|..||.++.  .....+.      .|.     ..|++++|+.+|-.++.|+.+|.+.+
T Consensus       179 N~v~in~~--hgLla~Gt~~g~VEfwDpR~k--srv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~i  254 (703)
T KOG2321|consen  179 NVVSINEE--HGLLACGTEDGVVEFWDPRDK--SRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLI  254 (703)
T ss_pred             eeeeecCc--cceEEecccCceEEEecchhh--hhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEE
Confidence            44444444  789999899999999999987  5554443      122     34999999999999999999999999


Q ss_pred             EECCcc---cc------ccceEEEEccC--CCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          84 WDLSLC---FI------QQVNALRITPD--KQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        84 ~d~~~~---~~------~~i~~~~~sp~--~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                      ||++..   +.      .+|..+.|.+.  ...+++...       ..+++||-.++.+....
T Consensus       255 yDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~Dk-------~~~kiWd~~~Gk~~asi  310 (703)
T KOG2321|consen  255 YDLRASKPLLVKDHGYELPIKKLDWQDTDQQNKVVSMDK-------RILKIWDECTGKPMASI  310 (703)
T ss_pred             EEcccCCceeecccCCccceeeecccccCCCceEEecch-------HHhhhcccccCCceeec
Confidence            999987   21      88999999875  345555532       25899998877665443

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=98.71  E-value=1.2e-06  Score=62.96  Aligned_cols=99  Identities=22%  Similarity=0.432  Sum_probs=78.5

Q ss_pred             EEEEEec-CCeEEEEeCCC-CCCCceEEecCCCCCEEEEEEccCCCEEEEEeC-CCcEEEEECCcc-----cc---ccce
Q psy7062          27 MVAALGG-YQHIRMYDFGS-NNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE-DCRARIWDLSLC-----FI---QQVN   95 (148)
Q Consensus        27 ~l~~~~~-d~~v~~~d~~~-~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-~~~i~l~d~~~~-----~~---~~i~   95 (148)
                      +++..+. ++.+.+||... .  .....+..|...+..++++|+++.++.++. ++.+++|+....     +.   ..+.
T Consensus       125 ~~~~~~~~d~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  202 (466)
T COG2319         125 ILLASSSLDGTVKLWDLSTPG--KLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVS  202 (466)
T ss_pred             EEeccCCCCccEEEEEecCCC--eEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceE
Confidence            4444344 88999999997 4  677888889999999999999998888885 999999999874     22   6799


Q ss_pred             EEEEccCCC-EEEEEecCCceecCeeEEEeecCCCccee
Q psy7062          96 ALRITPDKQ-LLASAEELSCCYCGAAVFVYNSCYPAAVV  133 (148)
Q Consensus        96 ~~~~sp~~~-~l~~~~~d~~~~~~~~i~~~d~~~~~~~~  133 (148)
                      +++|+|++. .+++++.|+      .|.+||........
T Consensus       203 ~~~~~~~~~~~~~~~~~d~------~i~~wd~~~~~~~~  235 (466)
T COG2319         203 SLAFSPDGGLLIASGSSDG------TIRLWDLSTGKLLR  235 (466)
T ss_pred             EEEEcCCcceEEEEecCCC------cEEEEECCCCcEEe
Confidence            999999998 555547777      78899877444433

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=98.70  E-value=1.6e-06  Score=62.52  Aligned_cols=107  Identities=14%  Similarity=0.185  Sum_probs=74.4

Q ss_pred             cEEEEEeCCCCccEEEEEe-cCCeEEEEeCCCCC-C-CceEEecCCCCCEEEEEEccCCCEEEEEe-CCCcEEEEECCcc
Q psy7062          14 QISTVFDSKHLVEMVAALG-GYQHIRMYDFGSNN-P-NPVINCEGVSKNVVEVGFQEDGKWMFTGG-EDCRARIWDLSLC   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~-~d~~v~~~d~~~~~-~-~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-~~~~i~l~d~~~~   89 (148)
                      +..++++++  ++++++++ .++.+.+|++++.. . +.+..+. +......++++|+++++++++ .++.|.+||+.+.
T Consensus        82 p~~i~~~~~--g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~  158 (330)
T PRK11028         82 PTHISTDHQ--GRFLFSASYNANCVSVSPLDKDGIPVAPIQIIE-GLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDD  158 (330)
T ss_pred             ceEEEECCC--CCEEEEEEcCCCeEEEEEECCCCCCCCceeecc-CCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCC
Confidence            456777887  67666655 47799999997431 0 1223332 233456788999999886655 4689999999763


Q ss_pred             --c--------c----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062          90 --F--------I----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        90 --~--------~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                        +        .    .....+.|+|+++++++++..     .++|.+||+..
T Consensus       159 g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~-----~~~v~v~~~~~  206 (330)
T PRK11028        159 GHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNEL-----NSSVDVWQLKD  206 (330)
T ss_pred             CcccccCCCceecCCCCCCceEEECCCCCEEEEEecC-----CCEEEEEEEeC
Confidence              1        1    445789999999999888761     23899999873

>KOG0280|consensus

Probab=98.67  E-value=5e-07  Score=62.89  Aligned_cols=110  Identities=13%  Similarity=0.124  Sum_probs=82.4

Q ss_pred             EEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEECCcc----c
Q psy7062          16 STVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIWDLSLC----F   90 (148)
Q Consensus        16 ~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d~~~~----~   90 (148)
                      ++..+.+..+.-++++-.+|.+.+-+......+.....+.|.-.....+|+. +.+.+.+|+.|+.+..||++.+    +
T Consensus       124 ~lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~  203 (339)
T KOG0280|consen  124 ALSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIW  203 (339)
T ss_pred             eeEEEeeccCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceee
Confidence            3333433335667776788888866666653344457888988888888886 5678999999999999999944    2


Q ss_pred             c------ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          91 I------QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        91 ~------~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                      .      ..+.++.-+| .+.++++|+-|.      .|++||.++...
T Consensus       204 ~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe------~i~~~DtRnm~k  245 (339)
T KOG0280|consen  204 HNSKVHTSGVVSIYSSPPKPTYIATGSYDE------CIRVLDTRNMGK  245 (339)
T ss_pred             ecceeeecceEEEecCCCCCceEEEecccc------ceeeeehhcccC
Confidence            2      6788887776 788999999888      999999996543

>KOG0642|consensus

Probab=98.67  E-value=6.2e-07  Score=67.00  Aligned_cols=112  Identities=15%  Similarity=0.151  Sum_probs=83.8

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCC-------C-CceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEEC
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNN-------P-NPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL   86 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~-------~-~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~   86 (148)
                      +.++..-..+++.+++|+-|++|+.|++....       . .....+.+|+..+..+++|+....|++++.||++++|+.
T Consensus       346 PVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~  425 (577)
T KOG0642|consen  346 PVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEP  425 (577)
T ss_pred             ceEEEEecCCceEEEeeccCceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeecc
Confidence            33333333449999999999999999775221       0 123567899999999999999989999999999999987


Q ss_pred             Ccc-------------------------------------------------cc----------ccceEEEEccCCCEEE
Q psy7062          87 SLC-------------------------------------------------FI----------QQVNALRITPDKQLLA  107 (148)
Q Consensus        87 ~~~-------------------------------------------------~~----------~~i~~~~~sp~~~~l~  107 (148)
                      ...                                                 |.          ..+..+.++|.....+
T Consensus       426 ~~~~~~~f~~~~e~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~  505 (577)
T KOG0642|consen  426 TEESPCTFGEPKEHGYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITF  505 (577)
T ss_pred             CCcCccccCCccccCCcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeE
Confidence            533                                                 00          3355677788888888


Q ss_pred             EEecCCceecCeeEEEeecCCCcce
Q psy7062         108 SAEELSCCYCGAAVFVYNSCYPAAV  132 (148)
Q Consensus       108 ~~~~d~~~~~~~~i~~~d~~~~~~~  132 (148)
                      ++-.|+      .|+++|..+....
T Consensus       506 ~~hed~------~Ir~~dn~~~~~l  524 (577)
T KOG0642|consen  506 TAHEDR------SIRFFDNKTGKIL  524 (577)
T ss_pred             ecccCC------ceecccccccccc
Confidence            888877      8889887765543

>PRK03629 tolB translocation protein TolB; Provisional

Probab=98.67  E-value=2.3e-06  Score=64.08  Aligned_cols=107  Identities=13%  Similarity=0.088  Sum_probs=71.5

Q ss_pred             EEEEEeCCCCccEEEEEec---CCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEE-eCCC--cEEEEECCc
Q psy7062          15 ISTVFDSKHLVEMVAALGG---YQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTG-GEDC--RARIWDLSL   88 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~---d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~-~~~~--~i~l~d~~~   88 (148)
                      ...+|+|+  |+.|+..+.   +..+.+||+.++  +. ..+...........|+|||+.++.. +.++  .|++||+.+
T Consensus       202 ~~p~wSPD--G~~la~~s~~~g~~~i~i~dl~~G--~~-~~l~~~~~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~t  276 (429)
T PRK03629        202 MSPAWSPD--GSKLAYVTFESGRSALVIQTLANG--AV-RQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLAS  276 (429)
T ss_pred             eeeEEcCC--CCEEEEEEecCCCcEEEEEECCCC--Ce-EEccCCCCCcCCeEECCCCCEEEEEEcCCCCcEEEEEECCC
Confidence            47888888  676665442   347999999887  32 2222223334568999999977654 4444  588999987


Q ss_pred             c----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          89 C----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        89 ~----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                      +    +.   .......|+|||+.|+.++.++   +...|+.+|+...
T Consensus       277 g~~~~lt~~~~~~~~~~wSPDG~~I~f~s~~~---g~~~Iy~~d~~~g  321 (429)
T PRK03629        277 GQIRQVTDGRSNNTEPTWFPDSQNLAYTSDQA---GRPQVYKVNINGG  321 (429)
T ss_pred             CCEEEccCCCCCcCceEECCCCCEEEEEeCCC---CCceEEEEECCCC
Confidence            6    22   4567889999999888777543   1335667776543

>KOG1524|consensus

Probab=98.63  E-value=1e-07  Score=71.12  Aligned_cols=94  Identities=15%  Similarity=0.176  Sum_probs=72.8

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---------------
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---------------   89 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---------------   89 (148)
                      .+.|+.+++||...+.+-. +  +..+...+|.+.+.+-.|+|||..+++++.||.|++|.-...               
T Consensus        75 ~d~~~i~s~DGkf~il~k~-~--rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrsGMLRStl~Q~~~~v~c~  151 (737)
T KOG1524|consen   75 SDTLLICSNDGRFVILNKS-A--RVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRSGMLRSTVVQNEESIRCA  151 (737)
T ss_pred             cceEEEEcCCceEEEeccc-c--hhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEeccchHHHHHhhcCceeEEE
Confidence            4556676999998886654 3  577788899999999999999999999999999999986433               


Q ss_pred             ---------------------cc------------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          90 ---------------------FI------------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        90 ---------------------~~------------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                                           +.            +-|.++.|++....+++|++|-      +.++||-.
T Consensus       152 ~W~p~S~~vl~c~g~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~------kfKvWD~~  216 (737)
T KOG1524|consen  152 RWAPNSNSIVFCQGGHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDF------RFKIWDAQ  216 (737)
T ss_pred             EECCCCCceEEecCCeEEEeecccccceeEEeccCcEEEEeecCccccceeecCCce------eEEeeccc
Confidence                                 00            4466677777777777777766      77788844

>PRK03629 tolB translocation protein TolB; Provisional

Probab=98.63  E-value=3.2e-06  Score=63.33  Aligned_cols=108  Identities=9%  Similarity=0.047  Sum_probs=72.4

Q ss_pred             EEEEEeCCCCccEEEEE-ecCC--eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeC-CCc--EEEEECCc
Q psy7062          15 ISTVFDSKHLVEMVAAL-GGYQ--HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE-DCR--ARIWDLSL   88 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~-~~d~--~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-~~~--i~l~d~~~   88 (148)
                      ...+|+|+  |+.|+.. +.++  .|.+||++++  + ...+..+...+....|+|||+.++..+. ++.  +..+|+..
T Consensus       246 ~~~~~SPD--G~~La~~~~~~g~~~I~~~d~~tg--~-~~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~  320 (429)
T PRK03629        246 GAPAFSPD--GSKLAFALSKTGSLNLYVMDLASG--Q-IRQVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNING  320 (429)
T ss_pred             CCeEECCC--CCEEEEEEcCCCCcEEEEEECCCC--C-EEEccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCC
Confidence            35678888  6666543 3344  5888999886  3 3444444556788999999998866654 344  44456665


Q ss_pred             c----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          89 C----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        89 ~----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                      +    +.   .......|+|||++++..+.++   ....|.+||+.+..
T Consensus       321 g~~~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~---g~~~I~~~dl~~g~  366 (429)
T PRK03629        321 GAPQRITWEGSQNQDADVSSDGKFMVMVSSNG---GQQHIAKQDLATGG  366 (429)
T ss_pred             CCeEEeecCCCCccCEEECCCCCEEEEEEccC---CCceEEEEECCCCC
Confidence            4    22   3456789999999988876543   23468889987554

>PRK01742 tolB translocation protein TolB; Provisional

Probab=98.62  E-value=6.7e-07  Score=66.89  Aligned_cols=89  Identities=17%  Similarity=0.147  Sum_probs=66.0

Q ss_pred             CCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC---CcEEEEECCcc----cc---ccceEEEEccCC
Q psy7062          34 YQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED---CRARIWDLSLC----FI---QQVNALRITPDK  103 (148)
Q Consensus        34 d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~---~~i~l~d~~~~----~~---~~i~~~~~sp~~  103 (148)
                      +..+.+||.+..  . ...+..+...+...+|+|||+.++..+.+   ..+++||+.++    +.   ......+|+|||
T Consensus       183 ~~~i~i~d~dg~--~-~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~~~~~~wSPDG  259 (429)
T PRK01742        183 PYEVRVADYDGF--N-QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGHNGAPAFSPDG  259 (429)
T ss_pred             eEEEEEECCCCC--C-ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCccCceeECCCC
Confidence            468999999876  3 45566677889999999999999887654   46999999876    22   344578999999


Q ss_pred             CEEEEEe-cCCceecCeeEEEeecCCC
Q psy7062         104 QLLASAE-ELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus       104 ~~l~~~~-~d~~~~~~~~i~~~d~~~~  129 (148)
                      +.|+.+. .++    ...|++||+...
T Consensus       260 ~~La~~~~~~g----~~~Iy~~d~~~~  282 (429)
T PRK01742        260 SRLAFASSKDG----VLNIYVMGANGG  282 (429)
T ss_pred             CEEEEEEecCC----cEEEEEEECCCC
Confidence            9888765 455    335667776543

>PRK04922 tolB translocation protein TolB; Provisional

Probab=98.61  E-value=2.3e-06  Score=64.12  Aligned_cols=107  Identities=12%  Similarity=0.074  Sum_probs=71.3

Q ss_pred             EEEEEeCCCCccEEEEEecC---CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEE-EEeCCC--cEEEEECCc
Q psy7062          15 ISTVFDSKHLVEMVAALGGY---QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMF-TGGEDC--RARIWDLSL   88 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d---~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~-~~~~~~--~i~l~d~~~   88 (148)
                      ...+|+|+  ++.++..+.+   ..+.+||+.++  +. ..+..........+|+|||+.++ +.+.++  .|++||+.+
T Consensus       207 ~~p~wSpD--g~~la~~s~~~~~~~l~~~dl~~g--~~-~~l~~~~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~  281 (433)
T PRK04922        207 LSPAWSPD--GKKLAYVSFERGRSAIYVQDLATG--QR-ELVASFRGINGAPSFSPDGRRLALTLSRDGNPEIYVMDLGS  281 (433)
T ss_pred             ccccCCCC--CCEEEEEecCCCCcEEEEEECCCC--CE-EEeccCCCCccCceECCCCCEEEEEEeCCCCceEEEEECCC
Confidence            35567777  7777765533   36999999887  32 23333344455789999999764 455555  599999987


Q ss_pred             c----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          89 C----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        89 ~----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                      +    +.   .......|+|||++|+.++...   +...|+++|+...
T Consensus       282 g~~~~lt~~~~~~~~~~~spDG~~l~f~sd~~---g~~~iy~~dl~~g  326 (433)
T PRK04922        282 RQLTRLTNHFGIDTEPTWAPDGKSIYFTSDRG---GRPQIYRVAASGG  326 (433)
T ss_pred             CCeEECccCCCCccceEECCCCCEEEEEECCC---CCceEEEEECCCC
Confidence            7    22   3346789999999888776432   1346777777544

>KOG0771|consensus

Probab=98.59  E-value=6.3e-07  Score=64.72  Aligned_cols=105  Identities=22%  Similarity=0.316  Sum_probs=79.8

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCC---------------------C---c------------eEEe----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNP---------------------N---P------------VINC----   53 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~---------------------~---~------------~~~~----   53 (148)
                      ...+.|+++  |++|++-+.| ..++|+.+++..                     .   .            +...    
T Consensus       189 V~DL~FS~d--gk~lasig~d-~~~VW~~~~g~~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~  265 (398)
T KOG0771|consen  189 VKDLDFSPD--GKFLASIGAD-SARVWSVNTGAALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISL  265 (398)
T ss_pred             cccceeCCC--CcEEEEecCC-ceEEEEeccCchhhhcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeee
Confidence            457788888  9999998888 999999987710                     0   0            0000    


Q ss_pred             -c-----------CCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc----ccceEEEEccCCCEEEEEecC
Q psy7062          54 -E-----------GVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI----QQVNALRITPDKQLLASAEEL  112 (148)
Q Consensus        54 -~-----------~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~----~~i~~~~~sp~~~~l~~~~~d  112 (148)
                       .           .....|++++++++|++++.|+.+|.+-+++..+.     .+    .-|+.+.|+|+.+.+++.+.+
T Consensus       266 w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~  345 (398)
T KOG0771|consen  266 WSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSD  345 (398)
T ss_pred             eccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccC
Confidence             0           01236899999999999999999999999999887     22    779999999999999998775


Q ss_pred             CceecCeeEEEeecC
Q psy7062         113 SCCYCGAAVFVYNSC  127 (148)
Q Consensus       113 ~~~~~~~~i~~~d~~  127 (148)
                      -      .+.+..+.
T Consensus       346 ~------~~~v~~l~  354 (398)
T KOG0771|consen  346 N------EAAVTKLA  354 (398)
T ss_pred             C------ceeEEEEe
Confidence            5      55555544

>PRK02889 tolB translocation protein TolB; Provisional

Probab=98.58  E-value=2.7e-06  Score=63.63  Aligned_cols=106  Identities=9%  Similarity=0.083  Sum_probs=68.0

Q ss_pred             EEEEEeCCCCccEEEEEecC---CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEE-EEeCCCcEEEEE--CCc
Q psy7062          15 ISTVFDSKHLVEMVAALGGY---QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMF-TGGEDCRARIWD--LSL   88 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d---~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~-~~~~~~~i~l~d--~~~   88 (148)
                      ...+|+|+  ++.|+..+.+   ..+.+||+.++  +.. .+...........|+|||+.++ +.+.++...+|.  +..
T Consensus       199 ~~p~wSPD--G~~la~~s~~~~~~~I~~~dl~~g--~~~-~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~  273 (427)
T PRK02889        199 ISPAWSPD--GTKLAYVSFESKKPVVYVHDLATG--RRR-VVANFKGSNSAPAWSPDGRTLAVALSRDGNSQIYTVNADG  273 (427)
T ss_pred             ccceEcCC--CCEEEEEEccCCCcEEEEEECCCC--CEE-EeecCCCCccceEECCCCCEEEEEEccCCCceEEEEECCC
Confidence            46778887  6766664533   35999999887  432 3333344566889999999775 567777666654  444


Q ss_pred             c----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062          89 C----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        89 ~----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                      .    +.   .......|+|||+.|+..+..+   +...|+.+|...
T Consensus       274 ~~~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~---g~~~Iy~~~~~~  317 (427)
T PRK02889        274 SGLRRLTQSSGIDTEPFFSPDGRSIYFTSDRG---GAPQIYRMPASG  317 (427)
T ss_pred             CCcEECCCCCCCCcCeEEcCCCCEEEEEecCC---CCcEEEEEECCC
Confidence            3    22   3356688999999888766432   123455555443

>KOG3914|consensus

Probab=98.57  E-value=7.6e-07  Score=64.04  Aligned_cols=88  Identities=15%  Similarity=0.181  Sum_probs=65.4

Q ss_pred             eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-------cc--ccceEEEEccCCCEE
Q psy7062          36 HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-------FI--QQVNALRITPDKQLL  106 (148)
Q Consensus        36 ~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-------~~--~~i~~~~~sp~~~~l  106 (148)
                      .+.+|....+   ....+-+|-+.++.++|+||++.++++++|..|++-.....       +.  .-+..++.- +++.|
T Consensus       133 ~~di~s~~~~---~~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~-~~~~L  208 (390)
T KOG3914|consen  133 SFDILSADSG---RCEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLT-DNYLL  208 (390)
T ss_pred             eeeeeccccc---CcchhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeec-cCcee
Confidence            4555555443   23344579999999999999999999999999998877654       21  344445554 44558


Q ss_pred             EEEecCCceecCeeEEEeecCCCccee
Q psy7062         107 ASAEELSCCYCGAAVFVYNSCYPAAVV  133 (148)
Q Consensus       107 ~~~~~d~~~~~~~~i~~~d~~~~~~~~  133 (148)
                      ++++.|+      ++++||+++.+...
T Consensus       209 lS~sGD~------tlr~Wd~~sgk~L~  229 (390)
T KOG3914|consen  209 LSGSGDK------TLRLWDITSGKLLD  229 (390)
T ss_pred             eecCCCC------cEEEEecccCCccc
Confidence            9999988      99999999877654

>KOG0650|consensus

Probab=98.56  E-value=2.7e-07  Score=69.54  Aligned_cols=95  Identities=18%  Similarity=0.243  Sum_probs=79.0

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..++.|+|.  ..+|++ +....|++||+...  +.+..+......|.+++++|.|..++.++.|+.+..||+.-.    
T Consensus       569 vq~v~FHPs--~p~lfV-aTq~~vRiYdL~kq--elvKkL~tg~kwiS~msihp~GDnli~gs~d~k~~WfDldlsskPy  643 (733)
T KOG0650|consen  569 VQRVKFHPS--KPYLFV-ATQRSVRIYDLSKQ--ELVKKLLTGSKWISSMSIHPNGDNLILGSYDKKMCWFDLDLSSKPY  643 (733)
T ss_pred             eeEEEecCC--CceEEE-EeccceEEEehhHH--HHHHHHhcCCeeeeeeeecCCCCeEEEecCCCeeEEEEcccCcchh
Confidence            457778887  556666 34689999999876  666666666788999999999999999999999999999755    


Q ss_pred             --cc---ccceEEEEccCCCEEEEEecCC
Q psy7062          90 --FI---QQVNALRITPDKQLLASAEELS  113 (148)
Q Consensus        90 --~~---~~i~~~~~sp~~~~l~~~~~d~  113 (148)
                        +.   ..+++++||+.-.++++++.|+
T Consensus       644 k~lr~H~~avr~Va~H~ryPLfas~sdDg  672 (733)
T KOG0650|consen  644 KTLRLHEKAVRSVAFHKRYPLFASGSDDG  672 (733)
T ss_pred             HHhhhhhhhhhhhhhccccceeeeecCCC
Confidence              22   7799999999999999999988

>PRK04922 tolB translocation protein TolB; Provisional

Probab=98.55  E-value=5.3e-06  Score=62.17  Aligned_cols=107  Identities=15%  Similarity=0.103  Sum_probs=72.3

Q ss_pred             EEEEeCCCCccEE-EEEecCC--eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEe-CCCc--EEEEECCcc
Q psy7062          16 STVFDSKHLVEMV-AALGGYQ--HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGG-EDCR--ARIWDLSLC   89 (148)
Q Consensus        16 ~~~~~~~~~~~~l-~~~~~d~--~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-~~~~--i~l~d~~~~   89 (148)
                      ..+|+|+  |+.+ ++.+.++  .|.+||+.++  + ...+..+.......+|+|||+.++..+ .++.  +.++|+..+
T Consensus       252 ~~~~SpD--G~~l~~~~s~~g~~~Iy~~d~~~g--~-~~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g  326 (433)
T PRK04922        252 APSFSPD--GRRLALTLSRDGNPEIYVMDLGSR--Q-LTRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGG  326 (433)
T ss_pred             CceECCC--CCEEEEEEeCCCCceEEEEECCCC--C-eEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCC
Confidence            5678887  5544 4445454  6999999887  3 445555555556789999999887665 4444  666676655


Q ss_pred             ----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 ----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 ----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                          +.   ......+|+|+|++++..+.++   ....|.+||+.+..
T Consensus       327 ~~~~lt~~g~~~~~~~~SpDG~~Ia~~~~~~---~~~~I~v~d~~~g~  371 (433)
T PRK04922        327 SAERLTFQGNYNARASVSPDGKKIAMVHGSG---GQYRIAVMDLSTGS  371 (433)
T ss_pred             CeEEeecCCCCccCEEECCCCCEEEEEECCC---CceeEEEEECCCCC
Confidence                22   3345689999999988876533   23479999987554

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=98.52  E-value=1.6e-05  Score=58.52  Aligned_cols=107  Identities=13%  Similarity=0.203  Sum_probs=75.1

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEe-CCCcEEEEECCcc--c
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGG-EDCRARIWDLSLC--F   90 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-~~~~i~l~d~~~~--~   90 (148)
                      |...+|+++  ++++++++.|+.+.++|+.+.  +.+.+++. .....++++|+||+++++++ .++.+.++|.++.  +
T Consensus        39 h~~~~~s~D--gr~~yv~~rdg~vsviD~~~~--~~v~~i~~-G~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v  113 (369)
T PF02239_consen   39 HAGLKFSPD--GRYLYVANRDGTVSVIDLATG--KVVATIKV-GGNPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPV  113 (369)
T ss_dssp             EEEEE-TT---SSEEEEEETTSEEEEEETTSS--SEEEEEE--SSEEEEEEE--TTTEEEEEEEETTEEEEEETTT--EE
T ss_pred             eeEEEecCC--CCEEEEEcCCCeEEEEECCcc--cEEEEEec-CCCcceEEEcCCCCEEEEEecCCCceeEeccccccce
Confidence            345667777  788888899999999999998  88888874 55678899999999988776 5789999999887  1


Q ss_pred             c-------------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          91 I-------------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        91 ~-------------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                      +             .++..+.-+|....++..-.|.     +.|.+.|.....
T Consensus       114 ~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~-----~~I~vVdy~d~~  161 (369)
T PF02239_consen  114 KTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDT-----GEIWVVDYSDPK  161 (369)
T ss_dssp             EEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTT-----TEEEEEETTTSS
T ss_pred             eecccccccccccCCCceeEEecCCCCEEEEEEccC-----CeEEEEEecccc
Confidence            1             3556777788888666655432     278888877654

...

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=98.52  E-value=7.5e-06  Score=60.78  Aligned_cols=107  Identities=12%  Similarity=0.093  Sum_probs=71.3

Q ss_pred             EEEEeCCCCccEEEEEecC---CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEE-EEeCCC--cEEEEECCcc
Q psy7062          16 STVFDSKHLVEMVAALGGY---QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMF-TGGEDC--RARIWDLSLC   89 (148)
Q Consensus        16 ~~~~~~~~~~~~l~~~~~d---~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~-~~~~~~--~i~l~d~~~~   89 (148)
                      ..+|+|+  ++.|+....+   ..+.+||+.++  +. ..+..+...+..++|+|||+.++ +.+.++  .+++||+.+.
T Consensus       194 ~p~~Spd--g~~la~~~~~~~~~~i~v~d~~~g--~~-~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~  268 (417)
T TIGR02800       194 SPAWSPD--GQKLAYVSFESGKPEIYVQDLATG--QR-EKVASFPGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGK  268 (417)
T ss_pred             cccCCCC--CCEEEEEEcCCCCcEEEEEECCCC--CE-EEeecCCCCccceEECCCCCEEEEEECCCCCccEEEEECCCC
Confidence            3456666  7777765543   37999999887  33 33333555566789999998765 444443  5888998776


Q ss_pred             ----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 ----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 ----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                          +.   .......|+|+++.|+.++..+   ....|+++|+....
T Consensus       269 ~~~~l~~~~~~~~~~~~s~dg~~l~~~s~~~---g~~~iy~~d~~~~~  313 (417)
T TIGR02800       269 QLTRLTNGPGIDTEPSWSPDGKSIAFTSDRG---GSPQIYMMDADGGE  313 (417)
T ss_pred             CEEECCCCCCCCCCEEECCCCCEEEEEECCC---CCceEEEEECCCCC
Confidence                22   3345678999999887766433   23468888876543

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>KOG2139|consensus

Probab=98.50  E-value=2.1e-06  Score=61.49  Aligned_cols=108  Identities=15%  Similarity=0.220  Sum_probs=78.3

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEec-CCCCCEEEEEEccCC-CEEEEEeCCCcEEEEECCcc--
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCE-GVSKNVVEVGFQEDG-KWMFTGGEDCRARIWDLSLC--   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~-~~~~~i~~~~~sp~~-~~l~~~~~~~~i~l~d~~~~--   89 (148)
                      -..++|++.  -.-++++..|.+|++||-+..  .+ ..++ .....|++++|.|.+ +.++.++.. -|.+|.....  
T Consensus       101 lr~~aWhqH--~~~fava~nddvVriy~ksst--~p-t~Lks~sQrnvtclawRPlsaselavgCr~-gIciW~~s~tln  174 (445)
T KOG2139|consen  101 LRGVAWHQH--IIAFAVATNDDVVRIYDKSST--CP-TKLKSVSQRNVTCLAWRPLSASELAVGCRA-GICIWSDSRTLN  174 (445)
T ss_pred             eeeEeechh--hhhhhhhccCcEEEEeccCCC--CC-ceecchhhcceeEEEeccCCcceeeeeecc-eeEEEEcCcccc
Confidence            467888875  456778799999999998875  22 2222 235679999999965 455666544 5888876432  


Q ss_pred             ---------------cc----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062          90 ---------------FI----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV  132 (148)
Q Consensus        90 ---------------~~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~  132 (148)
                                     ++    .++.+++|.+||..+++++-+     ...|.+||+.+...+
T Consensus       175 ~~r~~~~~s~~~~qvl~~pgh~pVtsmqwn~dgt~l~tAS~g-----sssi~iWdpdtg~~~  231 (445)
T KOG2139|consen  175 ANRNIRMMSTHHLQVLQDPGHNPVTSMQWNEDGTILVTASFG-----SSSIMIWDPDTGQKI  231 (445)
T ss_pred             cccccccccccchhheeCCCCceeeEEEEcCCCCEEeecccC-----cceEEEEcCCCCCcc
Confidence                           22    789999999999999998863     337999999876543

>PRK00178 tolB translocation protein TolB; Provisional

Probab=98.50  E-value=1.1e-05  Score=60.36  Aligned_cols=108  Identities=10%  Similarity=0.002  Sum_probs=70.9

Q ss_pred             EEEEEeCCCCccEEEEEecC---CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEE-EEeCCC--cEEEEECCc
Q psy7062          15 ISTVFDSKHLVEMVAALGGY---QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMF-TGGEDC--RARIWDLSL   88 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d---~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~-~~~~~~--~i~l~d~~~   88 (148)
                      ....|+|+  |+.|+..+.+   ..+.+||++++  +. ..+...........|+|||+.++ +.+.++  .|+++|+.+
T Consensus       202 ~~p~wSpD--G~~la~~s~~~~~~~l~~~~l~~g--~~-~~l~~~~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~  276 (430)
T PRK00178        202 LSPRWSPD--GKRIAYVSFEQKRPRIFVQNLDTG--RR-EQITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLAS  276 (430)
T ss_pred             eeeeECCC--CCEEEEEEcCCCCCEEEEEECCCC--CE-EEccCCCCCcCCeEECCCCCEEEEEEccCCCceEEEEECCC
Confidence            45677887  6666654533   36889999887  32 23333334455689999999776 444454  588889987


Q ss_pred             c----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          89 C----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        89 ~----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                      +    +.   .......|+||++.++..+..+   +...|+++|+...+
T Consensus       277 ~~~~~lt~~~~~~~~~~~spDg~~i~f~s~~~---g~~~iy~~d~~~g~  322 (430)
T PRK00178        277 RQLSRVTNHPAIDTEPFWGKDGRTLYFTSDRG---GKPQIYKVNVNGGR  322 (430)
T ss_pred             CCeEEcccCCCCcCCeEECCCCCEEEEEECCC---CCceEEEEECCCCC
Confidence            6    22   3455678999999877766422   23468888876543

>PRK02889 tolB translocation protein TolB; Provisional

Probab=98.50  E-value=5.8e-06  Score=61.90  Aligned_cols=108  Identities=18%  Similarity=0.201  Sum_probs=70.4

Q ss_pred             EEEEEeCCCCccEEE-EEecCCeEEEEeC--CCCCCCceEEecCCCCCEEEEEEccCCCEEEEEe-CCCcEEEEEC--Cc
Q psy7062          15 ISTVFDSKHLVEMVA-ALGGYQHIRMYDF--GSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGG-EDCRARIWDL--SL   88 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~-~~~~d~~v~~~d~--~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-~~~~i~l~d~--~~   88 (148)
                      ...+|+|+  |+.++ +.+.++...+|.+  .++   ....+..+........|+|||+.++..+ .++...+|.+  ..
T Consensus       243 ~~~~~SPD--G~~la~~~~~~g~~~Iy~~d~~~~---~~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~  317 (427)
T PRK02889        243 SAPAWSPD--GRTLAVALSRDGNSQIYTVNADGS---GLRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASG  317 (427)
T ss_pred             cceEECCC--CCEEEEEEccCCCceEEEEECCCC---CcEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCC
Confidence            46788888  65554 4466776666654  443   3455554555566788999999877654 3456666654  33


Q ss_pred             c----c--c-ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          89 C----F--I-QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        89 ~----~--~-~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                      +    +  . .......|+|+|++++..+.++   +...|.+||+.+..
T Consensus       318 g~~~~lt~~g~~~~~~~~SpDG~~Ia~~s~~~---g~~~I~v~d~~~g~  363 (427)
T PRK02889        318 GAAQRVTFTGSYNTSPRISPDGKLLAYISRVG---GAFKLYVQDLATGQ  363 (427)
T ss_pred             CceEEEecCCCCcCceEECCCCCEEEEEEccC---CcEEEEEEECCCCC
Confidence            3    2  2 3345678999999998877654   23469999987654

>KOG4547|consensus

Probab=98.50  E-value=4.3e-06  Score=62.80  Aligned_cols=109  Identities=16%  Similarity=0.102  Sum_probs=93.0

Q ss_pred             CccEEEEEecCCeEEEEeCCCCCCCceEEec--CCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc---cc
Q psy7062          24 LVEMVAALGGYQHIRMYDFGSNNPNPVINCE--GVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI---QQ   93 (148)
Q Consensus        24 ~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~--~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~---~~   93 (148)
                      ...+++-|...|.+.+|++..+  +..+.+.  .|...|.++.++.+-..+.+++-|..+..|+.+..     +.   ..
T Consensus        69 ~t~~lvlgt~~g~v~~ys~~~g--~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~  146 (541)
T KOG4547|consen   69 DTSMLVLGTPQGSVLLYSVAGG--EITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPL  146 (541)
T ss_pred             CceEEEeecCCccEEEEEecCC--eEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCc
Confidence            3567888888899999999988  6666665  58899999999999999999999999999999887     22   66


Q ss_pred             ceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccCcccCcc
Q psy7062          94 VNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTLVKPQ  142 (148)
Q Consensus        94 i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~  142 (148)
                      +.+++.+||+..++++++        +|++||+.+.+.+....++..|-
T Consensus       147 ~~sl~is~D~~~l~~as~--------~ik~~~~~~kevv~~ftgh~s~v  187 (541)
T KOG4547|consen  147 VSSLCISPDGKILLTASR--------QIKVLDIETKEVVITFTGHGSPV  187 (541)
T ss_pred             cceEEEcCCCCEEEeccc--------eEEEEEccCceEEEEecCCCcce
Confidence            888999999999999998        99999999888888877776664

>PRK05137 tolB translocation protein TolB; Provisional

Probab=98.49  E-value=8.2e-06  Score=61.21  Aligned_cols=89  Identities=13%  Similarity=0.072  Sum_probs=66.2

Q ss_pred             CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeC---CCcEEEEECCcc----cc---ccceEEEEccCCC
Q psy7062          35 QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE---DCRARIWDLSLC----FI---QQVNALRITPDKQ  104 (148)
Q Consensus        35 ~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~---~~~i~l~d~~~~----~~---~~i~~~~~sp~~~  104 (148)
                      ..|.++|.+..   ....+..+...+...+|+|||+.++..+.   +..+++||+.++    +.   ..+....|+|||+
T Consensus       182 ~~l~~~d~dg~---~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~  258 (435)
T PRK05137        182 KRLAIMDQDGA---NVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRELVGNFPGMTFAPRFSPDGR  258 (435)
T ss_pred             eEEEEECCCCC---CcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEEEeecCCCcccCcEECCCCC
Confidence            37888888765   44556667788999999999998877654   468999999876    22   5567889999999


Q ss_pred             EEEE-EecCCceecCeeEEEeecCCCc
Q psy7062         105 LLAS-AEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus       105 ~l~~-~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                      .|+. .+.++    ...|++||+.+..
T Consensus       259 ~la~~~~~~g----~~~Iy~~d~~~~~  281 (435)
T PRK05137        259 KVVMSLSQGG----NTDIYTMDLRSGT  281 (435)
T ss_pred             EEEEEEecCC----CceEEEEECCCCc
Confidence            7764 44444    4468888977543

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=98.49  E-value=8.2e-06  Score=60.53  Aligned_cols=99  Identities=15%  Similarity=0.106  Sum_probs=80.3

Q ss_pred             ccEEEEEecCC-eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----cc----ccce
Q psy7062          25 VEMVAALGGYQ-HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----FI----QQVN   95 (148)
Q Consensus        25 ~~~l~~~~~d~-~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----~~----~~i~   95 (148)
                      ++-++.|..|+ .+-++|.+++  + ...+...-+.|.+++++|+|++++.+.....+.+.|+.++    ..    +-|.
T Consensus       371 ~e~~vigt~dgD~l~iyd~~~~--e-~kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididngnv~~idkS~~~lIt  447 (668)
T COG4946         371 PEGDVIGTNDGDKLGIYDKDGG--E-VKRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLIDKSEYGLIT  447 (668)
T ss_pred             CcceEEeccCCceEEEEecCCc--e-EEEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEecccccceeE
Confidence            44566767777 8999999987  4 4455556788999999999999999998999999999988    21    7799


Q ss_pred             EEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062          96 ALRITPDKQLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        96 ~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                      .+.|||++++++-+..+|-..  +.|+++|...
T Consensus       448 df~~~~nsr~iAYafP~gy~t--q~Iklydm~~  478 (668)
T COG4946         448 DFDWHPNSRWIAYAFPEGYYT--QSIKLYDMDG  478 (668)
T ss_pred             EEEEcCCceeEEEecCcceee--eeEEEEecCC
Confidence            999999999999999876433  3677777654

>KOG4532|consensus

Probab=98.48  E-value=4.7e-06  Score=57.65  Aligned_cols=107  Identities=9%  Similarity=0.070  Sum_probs=80.4

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCC--CEEEEEEccCCCEEEEEeCCCcEEEEECCcc---c-----c---
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSK--NVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---F-----I---   91 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~--~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---~-----~---   91 (148)
                      ..++.+ +.|.++++++++..  .....  .|..  ....+++++|++++++.+....+.+|.+...   +     .   
T Consensus       129 ~~~~i~-sndht~k~~~~~~~--s~~~~--~h~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~  203 (344)
T KOG4532|consen  129 FPLNIA-SNDHTGKTMVVSGD--SNKFA--VHNQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTS  203 (344)
T ss_pred             cceeec-cCCcceeEEEEecC--cccce--eeccccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccC
Confidence            344555 88899999988865  22212  2333  3788999999999999999999999999765   1     1   


Q ss_pred             ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccCcccCcc
Q psy7062          92 QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTLVKPQ  142 (148)
Q Consensus        92 ~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~  142 (148)
                      ..-.+..|+.....+++++.||      .+.+||+++..-+...+...+|.
T Consensus       204 D~gF~~S~s~~~~~FAv~~Qdg------~~~I~DVR~~~tpm~~~sstrp~  248 (344)
T KOG4532|consen  204 DHGFYNSFSENDLQFAVVFQDG------TCAIYDVRNMATPMAEISSTRPH  248 (344)
T ss_pred             CCceeeeeccCcceEEEEecCC------cEEEEEecccccchhhhcccCCC
Confidence            5567889999999999999998      99999999877665554444443

>KOG3881|consensus

Probab=98.47  E-value=4.9e-06  Score=59.95  Aligned_cols=105  Identities=12%  Similarity=0.179  Sum_probs=83.4

Q ss_pred             CCCCccEEEEEecC--CeEEEEeCCCCCCCceEEecCC---------CCCEEEEEEccC--CCEEEEEeCCCcEEEEECC
Q psy7062          21 SKHLVEMVAALGGY--QHIRMYDFGSNNPNPVINCEGV---------SKNVVEVGFQED--GKWMFTGGEDCRARIWDLS   87 (148)
Q Consensus        21 ~~~~~~~l~~~~~d--~~v~~~d~~~~~~~~~~~~~~~---------~~~i~~~~~sp~--~~~l~~~~~~~~i~l~d~~   87 (148)
                      .+....++++|+..  ..+++||+++.  +++.+-+.-         +-+++++.|-+.  ...+++++..+.+++||.+
T Consensus       157 ~~~~p~Iva~GGke~~n~lkiwdle~~--~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~  234 (412)
T KOG3881|consen  157 TDTDPYIVATGGKENINELKIWDLEQS--KQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTR  234 (412)
T ss_pred             CCCCCceEecCchhcccceeeeecccc--eeeeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCc
Confidence            33446677888888  78999999987  555554432         246788888886  7899999999999999998


Q ss_pred             cc------cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCccee
Q psy7062          88 LC------FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVV  133 (148)
Q Consensus        88 ~~------~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~  133 (148)
                      .+      |.   .++.++...|++++++++..-+      .+..+|++......
T Consensus       235 ~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g------~l~~FD~r~~kl~g  283 (412)
T KOG3881|consen  235 HQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKG------QLAKFDLRGGKLLG  283 (412)
T ss_pred             ccCcceeEeccccCcceeeeecCCCcEEEEecccc------hhheecccCceeec
Confidence            76      22   8899999999999999999855      89999998765543

>PRK04792 tolB translocation protein TolB; Provisional

Probab=98.45  E-value=1.4e-05  Score=60.20  Aligned_cols=107  Identities=14%  Similarity=0.055  Sum_probs=69.5

Q ss_pred             EEEEeCCCCccEEEEEec-CC--eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEE-EeCCCc--EEEEECCcc
Q psy7062          16 STVFDSKHLVEMVAALGG-YQ--HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFT-GGEDCR--ARIWDLSLC   89 (148)
Q Consensus        16 ~~~~~~~~~~~~l~~~~~-d~--~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~-~~~~~~--i~l~d~~~~   89 (148)
                      ...|+|+  |+.|+..+. ++  .+.++|+.++  +. ..+...........|+|||+.++. .+.++.  |.++|+.++
T Consensus       222 ~p~wSPD--G~~La~~s~~~g~~~L~~~dl~tg--~~-~~lt~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg  296 (448)
T PRK04792        222 SPAWSPD--GRKLAYVSFENRKAEIFVQDIYTQ--VR-EKVTSFPGINGAPRFSPDGKKLALVLSKDGQPEIYVVDIATK  296 (448)
T ss_pred             CceECCC--CCEEEEEEecCCCcEEEEEECCCC--Ce-EEecCCCCCcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCC
Confidence            5678887  666665443 22  5888899877  32 222222333446799999997754 555664  777788766


Q ss_pred             ----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 ----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 ----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                          +.   .......|+||++.|+..+..+   ....|+++|+.+.+
T Consensus       297 ~~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~---g~~~Iy~~dl~~g~  341 (448)
T PRK04792        297 ALTRITRHRAIDTEPSWHPDGKSLIFTSERG---GKPQIYRVNLASGK  341 (448)
T ss_pred             CeEECccCCCCccceEECCCCCEEEEEECCC---CCceEEEEECCCCC
Confidence                22   3456789999999887766432   23468888876543

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=98.43  E-value=2e-06  Score=64.77  Aligned_cols=69  Identities=16%  Similarity=0.164  Sum_probs=55.7

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCc
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSL   88 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~   88 (148)
                      ..+++++|+  .+.|+.|+.||+|.+||...+    +.......-.++.++|+|+|..+++|+..|.+.+||.--
T Consensus       262 v~~ca~sp~--E~kLvlGC~DgSiiLyD~~~~----~t~~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~AL  330 (545)
T PF11768_consen  262 VICCARSPS--EDKLVLGCEDGSIILYDTTRG----VTLLAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMAL  330 (545)
T ss_pred             ceEEecCcc--cceEEEEecCCeEEEEEcCCC----eeeeeeecccceEEEEcCCCcEEEEEcCCceEEEEEeec
Confidence            456666666  788899999999999999865    333333455678999999999999999999999999843

>KOG1409|consensus

Probab=98.41  E-value=2.8e-06  Score=60.41  Aligned_cols=84  Identities=15%  Similarity=0.298  Sum_probs=67.0

Q ss_pred             ccccceeeecC----cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC
Q psy7062           3 AALGGILTAFG----QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED   78 (148)
Q Consensus         3 ~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~   78 (148)
                      ++++-+.+..+    ..+.+|++.  ..+|.+|..|..+.+||+...+ .....+.+|...|..+..-+--+.+.+++.|
T Consensus       185 ~~~~~i~~~~~h~~~~~~l~Wd~~--~~~LfSg~~d~~vi~wdigg~~-g~~~el~gh~~kV~~l~~~~~t~~l~S~~ed  261 (404)
T KOG1409|consen  185 NGCQLITTFNGHTGEVTCLKWDPG--QRLLFSGASDHSVIMWDIGGRK-GTAYELQGHNDKVQALSYAQHTRQLISCGED  261 (404)
T ss_pred             cCCceEEEEcCcccceEEEEEcCC--CcEEEeccccCceEEEeccCCc-ceeeeeccchhhhhhhhhhhhheeeeeccCC
Confidence            44555555544    357777777  7889999999999999998762 3456777899999999888888899999999


Q ss_pred             CcEEEEECCcc
Q psy7062          79 CRARIWDLSLC   89 (148)
Q Consensus        79 ~~i~l~d~~~~   89 (148)
                      |.|.+||.+..
T Consensus       262 g~i~~w~mn~~  272 (404)
T KOG1409|consen  262 GGIVVWNMNVK  272 (404)
T ss_pred             CeEEEEeccce
Confidence            99999999654

>KOG1587|consensus

Probab=98.40  E-value=6.8e-06  Score=62.97  Aligned_cols=90  Identities=13%  Similarity=0.201  Sum_probs=72.3

Q ss_pred             CeEEEEeCCCCCCCceEEecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEECCcc-------c--c-----ccceEEEE
Q psy7062          35 QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIWDLSLC-------F--I-----QQVNALRI   99 (148)
Q Consensus        35 ~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d~~~~-------~--~-----~~i~~~~~   99 (148)
                      +.+.+|+++.+ ..+...+. ....|++++|+| +...++.|+.+|.|-+||++.+       +  .     .++..+.|
T Consensus       222 ~~~~vW~~~~p-~~Pe~~~~-~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW  299 (555)
T KOG1587|consen  222 GVLLVWSLKNP-NTPELVLE-SPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVW  299 (555)
T ss_pred             ceEEEEecCCC-CCceEEEe-cCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEE
Confidence            37999999987 45566665 578899999999 6778899999999999999876       1  1     77888899


Q ss_pred             ccCC--CEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062         100 TPDK--QLLASAEELSCCYCGAAVFVYNSCYPAAV  132 (148)
Q Consensus       100 sp~~--~~l~~~~~d~~~~~~~~i~~~d~~~~~~~  132 (148)
                      ..+.  .-+++++.||      .|..|+++....+
T Consensus       300 ~~~~~~~~f~s~ssDG------~i~~W~~~~l~~P  328 (555)
T KOG1587|consen  300 LQNEHNTEFFSLSSDG------SICSWDTDMLSLP  328 (555)
T ss_pred             eccCCCCceEEEecCC------cEeeeeccccccc
Confidence            7644  4499999999      9999998765543

>KOG1963|consensus

Probab=98.39  E-value=7.1e-06  Score=64.10  Aligned_cols=107  Identities=16%  Similarity=0.165  Sum_probs=80.8

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEE---ecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCc--
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVIN---CEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSL--   88 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~---~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~--   88 (148)
                      +.++++.+.  +++.+. ..+..+.+|+.+... +....   -..|.-.+++.++||.+++++++..||.|.+|.-..  
T Consensus       163 ~~~I~~~~~--ge~~~i-~~~~~~~~~~v~~~~-~~~~~~~~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~  238 (792)
T KOG1963|consen  163 PKSIVDNNS--GEFKGI-VHMCKIHIYFVPKHT-KHTSSRDITVHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSS  238 (792)
T ss_pred             CccEEEcCC--ceEEEE-EEeeeEEEEEecccc-eeeccchhhhhhcccceeEEeccccceEEEeccCCcEEEEeccccc
Confidence            456666665  555555 557788889888741 11111   123666689999999999999999999999994433  


Q ss_pred             c-------cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          89 C-------FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        89 ~-------~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                      .       |.   ..+.+++|+++|.+|++|+.++      -+.+|...++.
T Consensus       239 ~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~------VLv~Wq~~T~~  284 (792)
T KOG1963|consen  239 DDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREG------VLVLWQLETGK  284 (792)
T ss_pred             cccccceEEEecccccceeEEecCCceEeecccce------EEEEEeecCCC
Confidence            2       32   6899999999999999999988      88999988765

>PRK01029 tolB translocation protein TolB; Provisional

Probab=98.37  E-value=2.5e-05  Score=58.55  Aligned_cols=110  Identities=11%  Similarity=0.055  Sum_probs=71.2

Q ss_pred             EEEEEeCCCCccEEEEEe-cCCeEEEE--eCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC---CcEEEEECCc
Q psy7062          15 ISTVFDSKHLVEMVAALG-GYQHIRMY--DFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED---CRARIWDLSL   88 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~-~d~~v~~~--d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~---~~i~l~d~~~   88 (148)
                      ...+|+|+  |+.|+..+ .++...+|  ++.... .....+..+...+....|+|||+.++..+.+   ..+.+||+.+
T Consensus       284 ~~p~wSPD--G~~Laf~s~~~g~~~ly~~~~~~~g-~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~  360 (428)
T PRK01029        284 GNPSFSPD--GTRLVFVSNKDGRPRIYIMQIDPEG-QSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLAT  360 (428)
T ss_pred             CCeEECCC--CCEEEEEECCCCCceEEEEECcccc-cceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCC
Confidence            35678888  66555544 45544555  443221 2234444444566788999999988765543   3689999987


Q ss_pred             c----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          89 C----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        89 ~----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                      +    +.   .......|+|||+.|+....++   ....|+++|+...+
T Consensus       361 g~~~~Lt~~~~~~~~p~wSpDG~~L~f~~~~~---g~~~L~~vdl~~g~  406 (428)
T PRK01029        361 GRDYQLTTSPENKESPSWAIDSLHLVYSAGNS---NESELYLISLITKK  406 (428)
T ss_pred             CCeEEccCCCCCccceEECCCCCEEEEEECCC---CCceEEEEECCCCC
Confidence            7    32   3466789999999887655432   24578899987654

>KOG1064|consensus

Probab=98.32  E-value=3.9e-06  Score=70.40  Aligned_cols=115  Identities=16%  Similarity=0.157  Sum_probs=92.1

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecC-CCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEG-VSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~-~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ....++....-.+.++|+.||.+++|.-..+  ..+..++. -++.++.+.|+.+|+.+..+..||.+-+|.+...    
T Consensus      2210 ~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~--~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~pk~~~s 2287 (2439)
T KOG1064|consen 2210 NVRRMTSHPSDPYYLTGSQDGSVRMFEWGHG--QQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQASPKPYTS 2287 (2439)
T ss_pred             ceeeecCCCCCceEEecCCCceEEEEeccCC--CeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccCCcceec
Confidence            4455554444778889999999999999887  66666652 3478999999999999999999999999988543    


Q ss_pred             ------------------------------------cc-----------ccceEEEEccCCCEEEEEecCCceecCeeEE
Q psy7062          90 ------------------------------------FI-----------QQVNALRITPDKQLLASAEELSCCYCGAAVF  122 (148)
Q Consensus        90 ------------------------------------~~-----------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~  122 (148)
                                                          +.           +...++++.|..+.|++|+++|      .|+
T Consensus      2288 ~qchnk~~~Df~Fi~s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllisggr~G------~v~ 2361 (2439)
T KOG1064|consen 2288 WQCHNKALSDFRFIGSLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLISGGRKG------EVC 2361 (2439)
T ss_pred             cccCCccccceeeeehhhhccccCCCCCcccchhcccCcccceeeeecCCCceEEEEcCcceEEEecCCcC------cEE
Confidence                                                00           6788899999999999999988      999


Q ss_pred             EeecCCCcceeccCc
Q psy7062         123 VYNSCYPAAVVASNT  137 (148)
Q Consensus       123 ~~d~~~~~~~~~~~~  137 (148)
                      +||++..+.++.++.
T Consensus      2362 l~D~rqrql~h~~~~ 2376 (2439)
T KOG1064|consen 2362 LFDIRQRQLRHTFQA 2376 (2439)
T ss_pred             EeehHHHHHHHHhhh
Confidence            999997777665544

>KOG4714|consensus

Probab=98.30  E-value=2.9e-06  Score=58.37  Aligned_cols=72  Identities=19%  Similarity=0.234  Sum_probs=59.3

Q ss_pred             EEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEECCcc
Q psy7062          16 STVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIWDLSLC   89 (148)
Q Consensus        16 ~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d~~~~   89 (148)
                      +++-+|.. ..+++.|++||.+-+||.++. ..+...+..|+..+..+-|+| ++..|+++++||.++-||..+.
T Consensus       184 ~l~~hp~q-q~~v~cgt~dg~~~l~d~rn~-~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~~  256 (319)
T KOG4714|consen  184 ALCSHPAQ-QHLVCCGTDDGIVGLWDARNV-AMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDASTT  256 (319)
T ss_pred             hhhCCccc-ccEEEEecCCCeEEEEEcccc-cchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCCc
Confidence            34444543 678888899999999999986 345667778999999999999 7889999999999999999843

>KOG4497|consensus

Probab=98.30  E-value=1.4e-05  Score=56.78  Aligned_cols=94  Identities=13%  Similarity=0.240  Sum_probs=73.1

Q ss_pred             EEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCC-EEEEEeCCCcEEEEECCcc----cc
Q psy7062          17 TVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGK-WMFTGGEDCRARIWDLSLC----FI   91 (148)
Q Consensus        17 ~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~~~~~i~l~d~~~~----~~   91 (148)
                      +-|..+. .-.|+....++.|.+|++...  +--..+..-...+..++|||||+ .+.+...+-+|-+|.+.+.    ++
T Consensus        54 ieW~ads-~~ilC~~yk~~~vqvwsl~Qp--ew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~~  130 (447)
T KOG4497|consen   54 IEWKADS-CHILCVAYKDPKVQVWSLVQP--EWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLLP  130 (447)
T ss_pred             eeeeccc-eeeeeeeeccceEEEEEeecc--eeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEEec
Confidence            3455553 344555588889999999987  66667766678899999999997 5566777899999999887    33


Q ss_pred             ---ccceEEEEccCCCEEEEEecCC
Q psy7062          92 ---QQVNALRITPDKQLLASAEELS  113 (148)
Q Consensus        92 ---~~i~~~~~sp~~~~l~~~~~d~  113 (148)
                         ..+..++|+|||++.+..++..
T Consensus       131 ~pK~~~kg~~f~~dg~f~ai~sRrD  155 (447)
T KOG4497|consen  131 HPKTNVKGYAFHPDGQFCAILSRRD  155 (447)
T ss_pred             ccccCceeEEECCCCceeeeeeccc
Confidence               6678899999999988887643

>PRK01029 tolB translocation protein TolB; Provisional

Probab=98.29  E-value=4e-05  Score=57.46  Aligned_cols=112  Identities=15%  Similarity=0.245  Sum_probs=67.0

Q ss_pred             EEEEEeCCCCccEEEEEec-CC----eEEEEeCCCCCC-CceEEecCCCCCEEEEEEccCCCEEEEEe-CCCcEEEE--E
Q psy7062          15 ISTVFDSKHLVEMVAALGG-YQ----HIRMYDFGSNNP-NPVINCEGVSKNVVEVGFQEDGKWMFTGG-EDCRARIW--D   85 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~-d~----~v~~~d~~~~~~-~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-~~~~i~l~--d   85 (148)
                      ...+|+|+  |+.|+..+. ++    .+..|++..+.. +...............+|+|||+.++..+ .++...+|  +
T Consensus       234 ~~p~wSPD--G~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~  311 (428)
T PRK01029        234 LMPTFSPR--KKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQ  311 (428)
T ss_pred             cceEECCC--CCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEE
Confidence            35678888  666665342 22    344467765311 22222222223446789999999776654 45654444  4


Q ss_pred             CCc--c----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          86 LSL--C----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        86 ~~~--~----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                      +..  .    +.   ..+....|+|||+.|+..+.++   +...|.+||+.+.+.
T Consensus       312 ~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~---g~~~I~v~dl~~g~~  363 (428)
T PRK01029        312 IDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIK---GVRQICVYDLATGRD  363 (428)
T ss_pred             CcccccceEEeccCCCCccceeECCCCCEEEEEEcCC---CCcEEEEEECCCCCe
Confidence            432  1    22   4567889999999888776543   234799999876543

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=98.28  E-value=4.9e-05  Score=56.46  Aligned_cols=107  Identities=15%  Similarity=0.097  Sum_probs=71.8

Q ss_pred             EEEEEeCCCCccEEE-EEecCC--eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeC-CC--cEEEEECCc
Q psy7062          15 ISTVFDSKHLVEMVA-ALGGYQ--HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE-DC--RARIWDLSL   88 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~-~~~~d~--~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-~~--~i~l~d~~~   88 (148)
                      ...+|+|+  ++.|+ +.+.++  .+.+||+.++  . ...+..+........|+|||+.++..+. .+  .+.++|+..
T Consensus       237 ~~~~~spD--g~~l~~~~~~~~~~~i~~~d~~~~--~-~~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~  311 (417)
T TIGR02800       237 GAPAFSPD--GSKLAVSLSKDGNPDIYVMDLDGK--Q-LTRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADG  311 (417)
T ss_pred             cceEECCC--CCEEEEEECCCCCccEEEEECCCC--C-EEECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCC
Confidence            35677787  55444 434443  5888898876  3 3444444444556789999998876554 33  577778766


Q ss_pred             c----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          89 C----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        89 ~----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                      .    +.   .......|+|++++++.++.++   ....|.+||+.+.
T Consensus       312 ~~~~~l~~~~~~~~~~~~spdg~~i~~~~~~~---~~~~i~~~d~~~~  356 (417)
T TIGR02800       312 GEVRRLTFRGGYNASPSWSPDGDLIAFVHREG---GGFNIAVMDLDGG  356 (417)
T ss_pred             CCEEEeecCCCCccCeEECCCCCEEEEEEccC---CceEEEEEeCCCC
Confidence            5    22   4566789999999988887654   3457889998753

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>KOG4497|consensus

Probab=98.27  E-value=1.5e-05  Score=56.77  Aligned_cols=67  Identities=15%  Similarity=0.308  Sum_probs=53.0

Q ss_pred             CCEEEEEEccCCCEEEEEeCC--CcEEEEECCcc-----c-c-ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062          58 KNVVEVGFQEDGKWMFTGGED--CRARIWDLSLC-----F-I-QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        58 ~~i~~~~~sp~~~~l~~~~~~--~~i~l~d~~~~-----~-~-~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                      ..+..++||+|..++++....  +.+.+||++..     + + .+|+.+.|+|....|+.+..      +.++++|...-
T Consensus       319 ~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLiQk~piraf~WdP~~prL~vctg------~srLY~W~psg  392 (447)
T KOG4497|consen  319 CGAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVLIQKHPIRAFEWDPGRPRLVVCTG------KSRLYFWAPSG  392 (447)
T ss_pred             cccceeeecCCceEEeeecCCCCceEEEEechhhhhhhhhhhccceeEEEeCCCCceEEEEcC------CceEEEEcCCC
Confidence            467889999999999987543  68999999887     2 2 99999999998877777665      33799998765


Q ss_pred             Cc
Q psy7062         129 PA  130 (148)
Q Consensus       129 ~~  130 (148)
                      +.
T Consensus       393 ~~  394 (447)
T KOG4497|consen  393 PR  394 (447)
T ss_pred             ce
Confidence            43

>PRK00178 tolB translocation protein TolB; Provisional

Probab=98.26  E-value=8.4e-05  Score=55.63  Aligned_cols=107  Identities=11%  Similarity=0.068  Sum_probs=71.0

Q ss_pred             EEEEeCCCCccEEE-EEecCC--eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeC-CC--cEEEEECCcc
Q psy7062          16 STVFDSKHLVEMVA-ALGGYQ--HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE-DC--RARIWDLSLC   89 (148)
Q Consensus        16 ~~~~~~~~~~~~l~-~~~~d~--~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-~~--~i~l~d~~~~   89 (148)
                      ..+|+|+  |+.|+ +.+.++  .+.++|++++  + ...+..+........|+|||+.++..+. ++  .+.++|+.++
T Consensus       247 ~~~~SpD--G~~la~~~~~~g~~~Iy~~d~~~~--~-~~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g  321 (430)
T PRK00178        247 APAWSPD--GSKLAFVLSKDGNPEIYVMDLASR--Q-LSRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGG  321 (430)
T ss_pred             CeEECCC--CCEEEEEEccCCCceEEEEECCCC--C-eEEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCC
Confidence            5778887  66655 434444  6888899886  3 3445545555667899999997765543 33  5777777665


Q ss_pred             ----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 ----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 ----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                          +.   .......|+|+++.++....++   +...|.+||+.+..
T Consensus       322 ~~~~lt~~~~~~~~~~~Spdg~~i~~~~~~~---~~~~l~~~dl~tg~  366 (430)
T PRK00178        322 RAERVTFVGNYNARPRLSADGKTLVMVHRQD---GNFHVAAQDLQRGS  366 (430)
T ss_pred             CEEEeecCCCCccceEECCCCCEEEEEEccC---CceEEEEEECCCCC
Confidence                22   2334568999999988877543   13468889987643

>PRK04792 tolB translocation protein TolB; Provisional

Probab=98.24  E-value=8.9e-05  Score=55.96  Aligned_cols=108  Identities=16%  Similarity=0.082  Sum_probs=70.3

Q ss_pred             EEEEEeCCCCccEEE-EEecCC--eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeC-CC--cEEEEECCc
Q psy7062          15 ISTVFDSKHLVEMVA-ALGGYQ--HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE-DC--RARIWDLSL   88 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~-~~~~d~--~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-~~--~i~l~d~~~   88 (148)
                      ...+|+|+  |+.|+ +.+.++  .|.++|++++  + ...+..+.......+|+|||+.++..+. ++  .+.++|+.+
T Consensus       265 ~~~~wSPD--G~~La~~~~~~g~~~Iy~~dl~tg--~-~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~  339 (448)
T PRK04792        265 GAPRFSPD--GKKLALVLSKDGQPEIYVVDIATK--A-LTRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLAS  339 (448)
T ss_pred             CCeeECCC--CCEEEEEEeCCCCeEEEEEECCCC--C-eEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCC
Confidence            35678887  66554 445555  4777788776  3 4445545556677899999998765543 34  466667765


Q ss_pred             c----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          89 C----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        89 ~----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                      +    +.   .......|+|||++|+..+.++   ....|.++|+.+..
T Consensus       340 g~~~~Lt~~g~~~~~~~~SpDG~~l~~~~~~~---g~~~I~~~dl~~g~  385 (448)
T PRK04792        340 GKVSRLTFEGEQNLGGSITPDGRSMIMVNRTN---GKFNIARQDLETGA  385 (448)
T ss_pred             CCEEEEecCCCCCcCeeECCCCCEEEEEEecC---CceEEEEEECCCCC
Confidence            5    22   2334578999999888876543   23467778876554

>KOG2695|consensus

Probab=98.24  E-value=1.1e-06  Score=62.47  Aligned_cols=115  Identities=15%  Similarity=0.193  Sum_probs=87.8

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----   89 (148)
                      ..++|+.+..+-.+++ +.+..+-+-|++++   ....|. ..+.|.++.|...+..+..|+.+|.|...|++.+     
T Consensus       215 ~~CawSlni~gyhfs~-G~sqqv~L~nvetg---~~qsf~-sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~  289 (425)
T KOG2695|consen  215 WSCAWSLNIMGYHFSV-GLSQQVLLTNVETG---HQQSFQ-SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNG  289 (425)
T ss_pred             hhhhhhhccceeeecc-cccceeEEEEeecc---cccccc-cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCC
Confidence            3457776655555445 66778888899987   344444 6788999999999999999999999999999876     


Q ss_pred             -----cc--ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeecCCCcc---eeccCcccC
Q psy7062          90 -----FI--QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNSCYPAA---VVASNTLVK  140 (148)
Q Consensus        90 -----~~--~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~---~~~~~~~~~  140 (148)
                           +.  +.++++..-. ++++|++.+.+|      +|++||++..+.   +.++++++.
T Consensus       290 ~~a~rlyh~Ssvtslq~Lq~s~q~LmaS~M~g------kikLyD~R~~K~~~~V~qYeGHvN  345 (425)
T KOG2695|consen  290 WCAQRLYHDSSVTSLQILQFSQQKLMASDMTG------KIKLYDLRATKCKKSVMQYEGHVN  345 (425)
T ss_pred             cceEEEEcCcchhhhhhhccccceEeeccCcC------ceeEeeehhhhcccceeeeecccc
Confidence                 11  6666665544 778888888888      999999997665   777776554

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=98.21  E-value=0.00012  Score=60.57  Aligned_cols=109  Identities=11%  Similarity=0.091  Sum_probs=77.2

Q ss_pred             CcEEEEEeCCCCcc-EEEEEecCCeEEEEeCCCCCCCceEE-------------ec--------CCCCCEEEEEEccCCC
Q psy7062          13 GQISTVFDSKHLVE-MVAALGGYQHIRMYDFGSNNPNPVIN-------------CE--------GVSKNVVEVGFQEDGK   70 (148)
Q Consensus        13 ~~~~~~~~~~~~~~-~l~~~~~d~~v~~~d~~~~~~~~~~~-------------~~--------~~~~~i~~~~~sp~~~   70 (148)
                      .+..++++++  ++ ++++-+.++.|++||++++  .....             +-        ..-....+++++++|.
T Consensus       741 ~P~GIavspd--G~~LYVADs~n~~Irv~D~~tg--~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~  816 (1057)
T PLN02919        741 QPSGISLSPD--LKELYIADSESSSIRALDLKTG--GSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQ  816 (1057)
T ss_pred             CccEEEEeCC--CCEEEEEECCCCeEEEEECCCC--cEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCc
Confidence            4567888887  55 5566566789999999876  21110             00        0012346889999999


Q ss_pred             EEEEEeCCCcEEEEECCcc-c---c-----------------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          71 WMFTGGEDCRARIWDLSLC-F---I-----------------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        71 ~l~~~~~~~~i~l~d~~~~-~---~-----------------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                      .+++...++.|++||..++ .   .                 .....++++++|+.+++-+.+.      +|++||+.+.
T Consensus       817 LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn------~Irvid~~~~  890 (1057)
T PLN02919        817 IYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNS------LIRYLDLNKG  890 (1057)
T ss_pred             EEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCC------EEEEEECCCC
Confidence            8888888999999999765 1   0                 2467889999998776665544      8999998875


Q ss_pred             cc
Q psy7062         130 AA  131 (148)
Q Consensus       130 ~~  131 (148)
                      ..
T Consensus       891 ~~  892 (1057)
T PLN02919        891 EA  892 (1057)
T ss_pred             cc
Confidence            43

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=98.20  E-value=4.9e-06  Score=40.72  Aligned_cols=28  Identities=25%  Similarity=0.481  Sum_probs=26.5

Q ss_pred             ccceEEEEccCCCEEEEEecCCceecCeeEEEee
Q psy7062          92 QQVNALRITPDKQLLASAEELSCCYCGAAVFVYN  125 (148)
Q Consensus        92 ~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d  125 (148)
                      ..|.+++|+|++++|++++.|+      +|++||
T Consensus        12 ~~i~~i~~~~~~~~~~s~~~D~------~i~vwd   39 (39)
T PF00400_consen   12 SSINSIAWSPDGNFLASGSSDG------TIRVWD   39 (39)
T ss_dssp             SSEEEEEEETTSSEEEEEETTS------EEEEEE
T ss_pred             CcEEEEEEecccccceeeCCCC------EEEEEC
Confidence            6799999999999999999999      999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG2695|consensus

Probab=98.18  E-value=1.5e-05  Score=56.94  Aligned_cols=100  Identities=8%  Similarity=0.023  Sum_probs=75.2

Q ss_pred             ccEEEEEecCCeEEEEeCCCCC---CCceEEecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEECCcc--------cc-
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNN---PNPVINCEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIWDLSLC--------FI-   91 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~---~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d~~~~--------~~-   91 (148)
                      ++++..|+..|.|...|++.+.   ..+...+. |.+.|+++..-. ++.++++.+.+|+|++||++.-        ++ 
T Consensus       264 ~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rly-h~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeG  342 (425)
T KOG2695|consen  264 DNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLY-HDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEG  342 (425)
T ss_pred             CCeeEecccCCcEEEEEeeecccCCCcceEEEE-cCcchhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeeec
Confidence            7888999999999999998752   12334444 899999998766 8889999999999999999754        22 


Q ss_pred             ----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          92 ----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        92 ----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                          ....-+-.++....+++++.|.      -.++|.+.....
T Consensus       343 HvN~~a~l~~~v~~eeg~I~s~GdDc------ytRiWsl~~ghL  380 (425)
T KOG2695|consen  343 HVNLSAYLPAHVKEEEGSIFSVGDDC------YTRIWSLDSGHL  380 (425)
T ss_pred             ccccccccccccccccceEEEccCee------EEEEEecccCce
Confidence                2222233456777888888877      789999885443

>KOG1354|consensus

Probab=98.18  E-value=1.4e-05  Score=57.06  Aligned_cols=106  Identities=8%  Similarity=0.171  Sum_probs=76.0

Q ss_pred             eCCCCccEEEEEecCCeEEEEeCCCCCCC-ceEEecCC-----CCCEEEEEEccC-CCEEEEEeCCCcEEEEECCcc---
Q psy7062          20 DSKHLVEMVAALGGYQHIRMYDFGSNNPN-PVINCEGV-----SKNVVEVGFQED-GKWMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        20 ~~~~~~~~l~~~~~d~~v~~~d~~~~~~~-~~~~~~~~-----~~~i~~~~~sp~-~~~l~~~~~~~~i~l~d~~~~---   89 (148)
                      +-+++.+.+.+ .+|=.|.+|+++-.... .+.-++.+     +..|++..|+|. .+.++..+..|+|++.|++..   
T Consensus       171 S~NsD~Et~lS-ADdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLC  249 (433)
T KOG1354|consen  171 SVNSDKETFLS-ADDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALC  249 (433)
T ss_pred             eecCccceEee-ccceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhh
Confidence            34444888888 77789999999754211 12222222     356889999995 567788888999999999843   


Q ss_pred             ------------------cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC-ccee
Q psy7062          90 ------------------FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP-AAVV  133 (148)
Q Consensus        90 ------------------~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~-~~~~  133 (148)
                                        |.   ..|..+.|+++|+++++-.       ..+|++||+... +++.
T Consensus       250 d~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRD-------yltvk~wD~nme~~pv~  308 (433)
T KOG1354|consen  250 DAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRD-------YLTVKLWDLNMEAKPVE  308 (433)
T ss_pred             cchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEec-------cceeEEEeccccCCcce
Confidence                              11   7788999999999998876       337999999644 3443

>KOG4714|consensus

Probab=98.16  E-value=8.2e-06  Score=56.21  Aligned_cols=64  Identities=13%  Similarity=0.288  Sum_probs=54.1

Q ss_pred             CCEEEEEEccCCC-EEEEEeCCCcEEEEECCcc------cc---ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeec
Q psy7062          58 KNVVEVGFQEDGK-WMFTGGEDCRARIWDLSLC------FI---QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNS  126 (148)
Q Consensus        58 ~~i~~~~~sp~~~-~l~~~~~~~~i~l~d~~~~------~~---~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~  126 (148)
                      ..|.+++-+|..+ .+++|+.||.+-+||.+..      +.   .+++.+-|+| ++..|+++++||      .+.-||-
T Consensus       180 ~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedG------slw~wda  253 (319)
T KOG4714|consen  180 DAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDG------SLWHWDA  253 (319)
T ss_pred             ccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCC------cEEEEcC
Confidence            4489999999655 6678888999999999987      22   8899999999 788999999999      7888886


Q ss_pred             C
Q psy7062         127 C  127 (148)
Q Consensus       127 ~  127 (148)
                      .
T Consensus       254 s  254 (319)
T KOG4714|consen  254 S  254 (319)
T ss_pred             C
Confidence            5

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=98.15  E-value=0.0004  Score=48.52  Aligned_cols=81  Identities=12%  Similarity=0.196  Sum_probs=58.4

Q ss_pred             CCCEEEEEEccCCCEEEEEeCCC-----------cEEEEECCcc-------------------------------c----
Q psy7062          57 SKNVVEVGFQEDGKWMFTGGEDC-----------RARIWDLSLC-------------------------------F----   90 (148)
Q Consensus        57 ~~~i~~~~~sp~~~~l~~~~~~~-----------~i~l~d~~~~-------------------------------~----   90 (148)
                      +..|.++.++|..+.|+.|+...           -+.-|.+-+.                               |    
T Consensus       147 p~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~  226 (282)
T PF15492_consen  147 PHGINSAVYHPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQG  226 (282)
T ss_pred             CCceeEEEEcCCCCEEEEeccCCCCCccccccccCceEEEEcCCCCcEEEccccCccccccccccceeeccceeeeeccc
Confidence            45789999999988877765421           2444544332                               0    


Q ss_pred             --cccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccCcccCcce
Q psy7062          91 --IQQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTLVKPQV  143 (148)
Q Consensus        91 --~~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~  143 (148)
                        +..|..+..||||+.|++....|      .|.+|++++......+...-.|..
T Consensus       227 ~~~d~i~kmSlSPdg~~La~ih~sG------~lsLW~iPsL~~~~~W~~~eqPg~  275 (282)
T PF15492_consen  227 QEQDGIFKMSLSPDGSLLACIHFSG------SLSLWEIPSLRLQRSWKQDEQPGY  275 (282)
T ss_pred             cCCCceEEEEECCCCCEEEEEEcCC------eEEEEecCcchhhcccchhhCCCC
Confidence              05678899999999999999988      999999998877766655555543

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=98.14  E-value=0.00021  Score=52.14  Aligned_cols=109  Identities=14%  Similarity=0.276  Sum_probs=72.2

Q ss_pred             cCcEEEEEeCCCCccEEEEEe-cCCeEEEEeCCCCCCC--ceEEecC----C--CCCEEEEEEccCCCEEEEEeC-CCcE
Q psy7062          12 FGQISTVFDSKHLVEMVAALG-GYQHIRMYDFGSNNPN--PVINCEG----V--SKNVVEVGFQEDGKWMFTGGE-DCRA   81 (148)
Q Consensus        12 ~~~~~~~~~~~~~~~~l~~~~-~d~~v~~~d~~~~~~~--~~~~~~~----~--~~~i~~~~~sp~~~~l~~~~~-~~~i   81 (148)
                      .++..++|+++  ++++++.. .+++|.++++......  .+.....    .  ......+.++|||++++.... .+.|
T Consensus       192 ~GPRh~~f~pd--g~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI  269 (345)
T PF10282_consen  192 SGPRHLAFSPD--GKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSI  269 (345)
T ss_dssp             SSEEEEEE-TT--SSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEE
T ss_pred             CCCcEEEEcCC--cCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEE
Confidence            35788999998  66555544 5568999999832112  2222221    1  126789999999998877654 5789


Q ss_pred             EEEECCc--c-cc---------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          82 RIWDLSL--C-FI---------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        82 ~l~d~~~--~-~~---------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                      .+|++..  + +.         ...+.+.++|+|++|++++.+.     +.|.+|++.
T Consensus       270 ~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s-----~~v~vf~~d  322 (345)
T PF10282_consen  270 SVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDS-----NTVSVFDID  322 (345)
T ss_dssp             EEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTT-----TEEEEEEEE
T ss_pred             EEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCC-----CeEEEEEEe
Confidence            9999942  2 21         4478999999999999998644     368888764

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>KOG2066|consensus

Probab=98.10  E-value=0.00011  Score=57.65  Aligned_cols=99  Identities=13%  Similarity=0.185  Sum_probs=76.8

Q ss_pred             CCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccC-----CCEEEEEeCCCcEEEEECCcc-------c
Q psy7062          23 HLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQED-----GKWMFTGGEDCRARIWDLSLC-------F   90 (148)
Q Consensus        23 ~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~-----~~~l~~~~~~~~i~l~d~~~~-------~   90 (148)
                      ..|+++++|+.||++.+..+-+.  +...++. ....+.+++++|+     .+.+++|+..| +.++.-+-.       +
T Consensus        81 ~~Gey~asCS~DGkv~I~sl~~~--~~~~~~d-f~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l  156 (846)
T KOG2066|consen   81 LEGEYVASCSDDGKVVIGSLFTD--DEITQYD-FKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVL  156 (846)
T ss_pred             cCCceEEEecCCCcEEEeeccCC--ccceeEe-cCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceee
Confidence            34999999999999999998887  4444443 5677899999998     45788888888 666654322       2


Q ss_pred             c---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceec
Q psy7062          91 I---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVA  134 (148)
Q Consensus        91 ~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~  134 (148)
                      .   ++|.++.|  .|.+++=++.+|       |++||....+.+..
T Consensus       157 ~~~eG~I~~i~W--~g~lIAWand~G-------v~vyd~~~~~~l~~  194 (846)
T KOG2066|consen  157 SEGEGPIHSIKW--RGNLIAWANDDG-------VKVYDTPTRQRLTN  194 (846)
T ss_pred             ecCccceEEEEe--cCcEEEEecCCC-------cEEEeccccceeec
Confidence            2   89999999  899999999988       99999876655443

>KOG4640|consensus

Probab=98.06  E-value=4e-05  Score=58.53  Aligned_cols=82  Identities=13%  Similarity=0.178  Sum_probs=69.1

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEE-EEEEccCCCEEEEEeCCCcEEEEECCcc--c
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVV-EVGFQEDGKWMFTGGEDCRARIWDLSLC--F   90 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~-~~~~sp~~~~l~~~~~~~~i~l~d~~~~--~   90 (148)
                      ..-+.|.|.  -+++|.+..+|.+.++-++ .  +.+.++..|...++ +++|.|||+.++.|=.||+|++.|+.++  +
T Consensus        23 i~~~ewnP~--~dLiA~~t~~gelli~R~n-~--qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l   97 (665)
T KOG4640|consen   23 IKRIEWNPK--MDLIATRTEKGELLIHRLN-W--QRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRL   97 (665)
T ss_pred             eEEEEEcCc--cchhheeccCCcEEEEEec-c--ceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCce
Confidence            456778887  8999999999999998888 4  67888887777777 9999999999999999999999999988  1


Q ss_pred             c-------ccceEEEEc
Q psy7062          91 I-------QQVNALRIT  100 (148)
Q Consensus        91 ~-------~~i~~~~~s  100 (148)
                      .       ..+.++-|+
T Consensus        98 ~~~~~s~e~~is~~~w~  114 (665)
T KOG4640|consen   98 VSFLFSVETDISKGIWD  114 (665)
T ss_pred             eccccccccchheeecc
Confidence            1       566667775

>KOG1538|consensus

Probab=98.05  E-value=0.00018  Score=55.73  Aligned_cols=103  Identities=11%  Similarity=0.057  Sum_probs=63.7

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCce--EEecCCCCCEEEEEEccCC-----CEEEEEeCCCcEEEEECC
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPV--INCEGVSKNVVEVGFQEDG-----KWMFTGGEDCRARIWDLS   87 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~--~~~~~~~~~i~~~~~sp~~-----~~l~~~~~~~~i~l~d~~   87 (148)
                      .+++|..+  |++|+.|-.+|+|.+-+-...  +.+  ...-+..+.|.+++|+|+.     ..++..++..++.++.+.
T Consensus       136 ~~CsWtnD--GqylalG~~nGTIsiRNk~gE--ek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~Ls  211 (1081)
T KOG1538|consen  136 ICCSWTND--GQYLALGMFNGTISIRNKNGE--EKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLS  211 (1081)
T ss_pred             EEeeecCC--CcEEEEeccCceEEeecCCCC--cceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEec
Confidence            35555555  999999999999988765432  111  1222344556666665532     244555555555555443


Q ss_pred             cc------------------------------------------------ccccceEEEEccCCCEEEEEecCCceecCe
Q psy7062          88 LC------------------------------------------------FIQQVNALRITPDKQLLASAEELSCCYCGA  119 (148)
Q Consensus        88 ~~------------------------------------------------~~~~i~~~~~sp~~~~l~~~~~d~~~~~~~  119 (148)
                      ..                                                +..+||.+...|+++.++.|+.||      
T Consensus       212 G~~Igk~r~L~FdP~CisYf~NGEy~LiGGsdk~L~~fTR~GvrLGTvg~~D~WIWtV~~~PNsQ~v~~GCqDG------  285 (1081)
T KOG1538|consen  212 GKQIGKDRALNFDPCCISYFTNGEYILLGGSDKQLSLFTRDGVRLGTVGEQDSWIWTVQAKPNSQYVVVGCQDG------  285 (1081)
T ss_pred             ceeecccccCCCCchhheeccCCcEEEEccCCCceEEEeecCeEEeeccccceeEEEEEEccCCceEEEEEccC------
Confidence            21                                                117788888888888888888877      


Q ss_pred             eEEEeecC
Q psy7062         120 AVFVYNSC  127 (148)
Q Consensus       120 ~i~~~d~~  127 (148)
                      +|.-|++-
T Consensus       286 TiACyNl~  293 (1081)
T KOG1538|consen  286 TIACYNLI  293 (1081)
T ss_pred             eeehhhhH
Confidence            77777654

>KOG0644|consensus

Probab=98.03  E-value=3.1e-06  Score=66.32  Aligned_cols=61  Identities=25%  Similarity=0.416  Sum_probs=54.4

Q ss_pred             CCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECC
Q psy7062          21 SKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLS   87 (148)
Q Consensus        21 ~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~   87 (148)
                      .+.++.++++++.|..|++|-+.++  .++..+.+|++.|++++|+|-.    +.+.||++++||.+
T Consensus       240 vs~~n~~iaaaS~D~vIrvWrl~~~--~pvsvLrghtgavtaiafsP~~----sss~dgt~~~wd~r  300 (1113)
T KOG0644|consen  240 VSSNNTMIAAASNDKVIRVWRLPDG--APVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDAR  300 (1113)
T ss_pred             cchhhhhhhhcccCceEEEEecCCC--chHHHHhccccceeeeccCccc----cCCCCCceEecccc
Confidence            4444778899999999999999998  8999999999999999999955    67789999999998

>PRK04043 tolB translocation protein TolB; Provisional

Probab=98.03  E-value=0.00091  Score=50.16  Aligned_cols=111  Identities=10%  Similarity=0.041  Sum_probs=69.6

Q ss_pred             EEEEEeCCCCccEEEEEec--CCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEE-EEeCC--CcEEEEECCcc
Q psy7062          15 ISTVFDSKHLVEMVAALGG--YQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMF-TGGED--CRARIWDLSLC   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~--d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~-~~~~~--~~i~l~d~~~~   89 (148)
                      ....|+|+....++++...  ...|.++|+.++  +. ..+...........|+|||+.++ +.+.+  ..+.++|+..+
T Consensus       191 ~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg--~~-~~lt~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g  267 (419)
T PRK04043        191 IFPKWANKEQTAFYYTSYGERKPTLYKYNLYTG--KK-EKIASSQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTK  267 (419)
T ss_pred             EeEEECCCCCcEEEEEEccCCCCEEEEEECCCC--cE-EEEecCCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCC
Confidence            4677888832223333222  246889999887  33 33323445556678999998664 44444  46777788666


Q ss_pred             ----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          90 ----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        90 ----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                          +.   .......|+|||+.|+..+..+   +...|+++|+...+.
T Consensus       268 ~~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~---g~~~Iy~~dl~~g~~  313 (419)
T PRK04043        268 TLTQITNYPGIDVNGNFVEDDKRIVFVSDRL---GYPNIFMKKLNSGSV  313 (419)
T ss_pred             cEEEcccCCCccCccEECCCCCEEEEEECCC---CCceEEEEECCCCCe
Confidence                33   2234568999999887777543   345788888875543

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=98.01  E-value=0.00046  Score=50.43  Aligned_cols=92  Identities=16%  Similarity=0.022  Sum_probs=68.6

Q ss_pred             CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeC----------CCcEEEEECCcc-----cc--c-----
Q psy7062          35 QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE----------DCRARIWDLSLC-----FI--Q-----   92 (148)
Q Consensus        35 ~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~----------~~~i~l~d~~~~-----~~--~-----   92 (148)
                      +++.+.|.++.  +.+.++..-. ....+ ++||++.++.+..          +..|.+||..+.     +.  .     
T Consensus        27 ~~v~ViD~~~~--~v~g~i~~G~-~P~~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~  102 (352)
T TIGR02658        27 TQVYTIDGEAG--RVLGMTDGGF-LPNPV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFL  102 (352)
T ss_pred             ceEEEEECCCC--EEEEEEEccC-CCcee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhh
Confidence            78999999998  8888877422 22234 8999998877655          689999999988     11  1     


Q ss_pred             ---cceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceec
Q psy7062          93 ---QVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVA  134 (148)
Q Consensus        93 ---~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~  134 (148)
                         ....++++|||++|+....+.    ...|.++|+.+.+....
T Consensus       103 ~~~~~~~~~ls~dgk~l~V~n~~p----~~~V~VvD~~~~kvv~e  143 (352)
T TIGR02658       103 VGTYPWMTSLTPDNKTLLFYQFSP----SPAVGVVDLEGKAFVRM  143 (352)
T ss_pred             ccCccceEEECCCCCEEEEecCCC----CCEEEEEECCCCcEEEE
Confidence               123789999999999888654    44799999887765443

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>KOG1240|consensus

Probab=98.01  E-value=2.9e-05  Score=63.25  Aligned_cols=80  Identities=14%  Similarity=0.232  Sum_probs=64.6

Q ss_pred             EeCCCCCCCceEEecCCCCCEEEEEEccC-CCEEEEEeCCCcEEEEECCcc----------c----c-ccceEEEEccCC
Q psy7062          40 YDFGSNNPNPVINCEGVSKNVVEVGFQED-GKWMFTGGEDCRARIWDLSLC----------F----I-QQVNALRITPDK  103 (148)
Q Consensus        40 ~d~~~~~~~~~~~~~~~~~~i~~~~~sp~-~~~l~~~~~~~~i~l~d~~~~----------~----~-~~i~~~~~sp~~  103 (148)
                      |+.+.   ..+..+..|...+..++.++. +.++++|+.||++++||++..          +    . .++.++...+.+
T Consensus      1034 W~p~G---~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~ 1110 (1431)
T KOG1240|consen 1034 WNPRG---ILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNG 1110 (1431)
T ss_pred             CCccc---eEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCC
Confidence            55543   467778889988889988775 599999999999999999765          1    1 778888888899


Q ss_pred             CEEEEEecCCceecCeeEEEeecCC
Q psy7062         104 QLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus       104 ~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                      +.++.++.||      .|.+.++..
T Consensus      1111 ~~~Av~t~DG------~v~~~~id~ 1129 (1431)
T KOG1240|consen 1111 DQFAVSTKDG------SVRVLRIDH 1129 (1431)
T ss_pred             CeEEEEcCCC------eEEEEEccc
Confidence            9999999999      777776654

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=98.01  E-value=0.0005  Score=50.18  Aligned_cols=114  Identities=8%  Similarity=0.127  Sum_probs=79.0

Q ss_pred             eecCcEEEEEeCCCCccEEEEEec----CCeEEEEeCCC--CCCCceEEecCCCCCEEEEEEccCCCEEEEEeC-CCcEE
Q psy7062          10 TAFGQISTVFDSKHLVEMVAALGG----YQHIRMYDFGS--NNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE-DCRAR   82 (148)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~l~~~~~----d~~v~~~d~~~--~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-~~~i~   82 (148)
                      ...++..++++++  +++|.+..+    ++.|..|++..  +....+............++++|++++++++.. ++.+.
T Consensus        35 ~~~~Ps~l~~~~~--~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~  112 (345)
T PF10282_consen   35 EGENPSWLAVSPD--GRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVS  112 (345)
T ss_dssp             ESSSECCEEE-TT--SSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred             CCCCCceEEEEeC--CCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEE
Confidence            3445677788887  677777666    35888888875  322334444434566788999999999998875 78999


Q ss_pred             EEECCcc---------c-----------c--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          83 IWDLSLC---------F-----------I--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        83 l~d~~~~---------~-----------~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                      ++++...         +           +  ....++.|+|+++++++...     +...|.+|++....
T Consensus       113 v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dl-----G~D~v~~~~~~~~~  177 (345)
T PF10282_consen  113 VFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDL-----GADRVYVYDIDDDT  177 (345)
T ss_dssp             EEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEET-----TTTEEEEEEE-TTS
T ss_pred             EEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEec-----CCCEEEEEEEeCCC
Confidence            9999763         1           0  33568999999999888764     24579999987554

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>smart00320 WD40 WD40 repeats

Probab=97.99  E-value=2.9e-05  Score=36.52  Aligned_cols=38  Identities=26%  Similarity=0.589  Sum_probs=32.6

Q ss_pred             CceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEE
Q psy7062          48 NPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWD   85 (148)
Q Consensus        48 ~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d   85 (148)
                      +.+..+..|...+.++.|++++..+++++.|+.+++||
T Consensus         3 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        3 ELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             EEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            44566667888999999999999999999999999986

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>KOG4547|consensus

Probab=97.95  E-value=0.00021  Score=54.03  Aligned_cols=82  Identities=15%  Similarity=0.150  Sum_probs=69.8

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc---ccceE
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI---QQVNA   96 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~---~~i~~   96 (148)
                      -..+.+++.|..+..|+....  +.++.+...+..+.+++++|||+.+++++  +.|++||+++.     |+   +++++
T Consensus       114 ~~ciyS~~ad~~v~~~~~~~~--~~~~~~~~~~~~~~sl~is~D~~~l~~as--~~ik~~~~~~kevv~~ftgh~s~v~t  189 (541)
T KOG4547|consen  114 LGCIYSVGADLKVVYILEKEK--VIIRIWKEQKPLVSSLCISPDGKILLTAS--RQIKVLDIETKEVVITFTGHGSPVRT  189 (541)
T ss_pred             cCceEecCCceeEEEEecccc--eeeeeeccCCCccceEEEcCCCCEEEecc--ceEEEEEccCceEEEEecCCCcceEE
Confidence            567888899999999999998  77888887888899999999999998885  57999999998     54   88999


Q ss_pred             EEEccC-----CCEEEEEe
Q psy7062          97 LRITPD-----KQLLASAE  110 (148)
Q Consensus        97 ~~~sp~-----~~~l~~~~  110 (148)
                      +.|.-+     |.+++++.
T Consensus       190 ~~f~~~~~g~~G~~vLssa  208 (541)
T KOG4547|consen  190 LSFTTLIDGIIGKYVLSSA  208 (541)
T ss_pred             EEEEEeccccccceeeecc
Confidence            999876     66666654

>KOG1409|consensus

Probab=97.94  E-value=9.3e-05  Score=52.93  Aligned_cols=75  Identities=20%  Similarity=0.356  Sum_probs=65.2

Q ss_pred             CceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc------cc---ccceEEEEccCCCEEEEEecCCceecC
Q psy7062          48 NPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC------FI---QQVNALRITPDKQLLASAEELSCCYCG  118 (148)
Q Consensus        48 ~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~------~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~  118 (148)
                      ..+.++.+|...+++++|.|....+.+|..|..+.+||+.-.      +.   ..+..+...+.-+.+++++.||     
T Consensus       188 ~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg-----  262 (404)
T KOG1409|consen  188 QLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDG-----  262 (404)
T ss_pred             ceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeeccCCC-----
Confidence            678899999999999999999999999999999999999654      22   6777787778888999999988     


Q ss_pred             eeEEEeecCC
Q psy7062         119 AAVFVYNSCY  128 (148)
Q Consensus       119 ~~i~~~d~~~  128 (148)
                       .|.+||...
T Consensus       263 -~i~~w~mn~  271 (404)
T KOG1409|consen  263 -GIVVWNMNV  271 (404)
T ss_pred             -eEEEEeccc
Confidence             899998653

>KOG4190|consensus

Probab=97.94  E-value=4.5e-05  Score=57.88  Aligned_cols=63  Identities=11%  Similarity=0.243  Sum_probs=47.5

Q ss_pred             ccEEEEEecCCeEEEEeCCCCC-----CCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNN-----PNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC   89 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~-----~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~   89 (148)
                      .+-+++++.|.++++|.++...     ..+..+++.|+..|..+.|-.+.++++++  |+.+++||...+
T Consensus       747 ENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc--D~giHlWDPFig  814 (1034)
T KOG4190|consen  747 ENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASC--DGGIHLWDPFIG  814 (1034)
T ss_pred             ccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeec--cCcceeeccccc
Confidence            4557788999999999997431     13567788899999999888887777554  778888887443

>KOG1912|consensus

Probab=97.93  E-value=0.00015  Score=56.89  Aligned_cols=118  Identities=15%  Similarity=0.112  Sum_probs=84.5

Q ss_pred             ccceeeecCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCC------------CEE
Q psy7062           5 LGGILTAFGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDG------------KWM   72 (148)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~------------~~l   72 (148)
                      +.|.....+..++.|.+   +.+++.|+ .+.|.+-|..+.  +.+..++.|...|+.+.|.|..            -.+
T Consensus         9 lpG~l~~sN~~A~Dw~~---~GLiAygs-hslV~VVDs~s~--q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lli   82 (1062)
T KOG1912|consen    9 LPGPLSRSNRNAADWSP---SGLIAYGS-HSLVSVVDSRSL--QLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLI   82 (1062)
T ss_pred             CCCCCCcccccccccCc---cceEEEec-CceEEEEehhhh--hhhhccccCccceeEEEeccCCCchhccCccccceeE
Confidence            34555555556666666   56788844 578888899988  8888999999999999998743            146


Q ss_pred             EEEeCCCcEEEEECCcc-----cc---ccceEEEEcc---CCCEEEEEecCCceecCeeEEEeecCCCccee
Q psy7062          73 FTGGEDCRARIWDLSLC-----FI---QQVNALRITP---DKQLLASAEELSCCYCGAAVFVYNSCYPAAVV  133 (148)
Q Consensus        73 ~~~~~~~~i~l~d~~~~-----~~---~~i~~~~~sp---~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~  133 (148)
                      ++++..|.|.+||....     +.   .++..++|-+   +.+.++.+-.     +...+.+|+..+++...
T Consensus        83 AsaD~~GrIil~d~~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh-----~ss~lvLwntdtG~k~W  149 (1062)
T KOG1912|consen   83 ASADISGRIILVDFVLASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIH-----GSSTLVLWNTDTGEKFW  149 (1062)
T ss_pred             EeccccCcEEEEEehhhhhhhhhcCCCcchhheeeeeccCcchheeEEec-----CCcEEEEEEccCCceee
Confidence            77778899999999877     33   6778888865   4544444332     24479999877776543

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=97.92  E-value=0.00019  Score=53.69  Aligned_cols=112  Identities=11%  Similarity=0.078  Sum_probs=81.5

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC---CcEEEEECCcc-
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED---CRARIWDLSLC-   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~---~~i~l~d~~~~-   89 (148)
                      ...++|.|.+++--+++|-...++.++|++..   ....+.  ...-..+.|+|.+++++.++.+   |.+-+||.... 
T Consensus       277 Vhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N---l~~~~P--e~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~rf  351 (561)
T COG5354         277 VHDFTWEPLSSRFAVISGYMPASVSVFDLRGN---LRFYFP--EQKRNTIFFSPHERYILFAGFDNLQGNIEIFDPAGRF  351 (561)
T ss_pred             ceeeeecccCCceeEEecccccceeecccccc---eEEecC--CcccccccccCcccEEEEecCCccccceEEeccCCce
Confidence            45778888865555566567778999999864   333333  3444567899999999998876   67999999877 


Q ss_pred             -----cc-ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 -----FI-QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 -----~~-~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                           +. ....-..|+||++++.+.......+-.+.|.+||+....
T Consensus       352 ~~~~~~~~~n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g~~  398 (561)
T COG5354         352 KVAGAFNGLNTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYGAK  398 (561)
T ss_pred             EEEEEeecCCceEeeccCCceEEEecCCCcccccCcceEEEEecCch
Confidence                 22 555667899999998887765554555679999976443

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=97.91  E-value=8.9e-05  Score=52.60  Aligned_cols=104  Identities=8%  Similarity=0.161  Sum_probs=74.6

Q ss_pred             CCCCccEEEEEecCCeEEEEeCCCCCCC-ceEEecCC-----CCCEEEEEEccCC-CEEEEEeCCCcEEEEECCcc----
Q psy7062          21 SKHLVEMVAALGGYQHIRMYDFGSNNPN-PVINCEGV-----SKNVVEVGFQEDG-KWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        21 ~~~~~~~l~~~~~d~~v~~~d~~~~~~~-~~~~~~~~-----~~~i~~~~~sp~~-~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      .+...+.+.+ .+|=.|.+|+++-.... .+..++.|     +..|++..|+|.. ..+...+..|.|++-|++..    
T Consensus       180 ~NsD~et~lS-aDdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcd  258 (460)
T COG5170         180 FNSDKETLLS-ADDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCD  258 (460)
T ss_pred             ecCchheeee-ccceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhcc
Confidence            3334778888 77789999999754211 12223333     3568889999954 46667778899999999843    


Q ss_pred             -----------------cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062          90 -----------------FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV  132 (148)
Q Consensus        90 -----------------~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~  132 (148)
                                       |.   ..|..+.|+++|+++++-+       ..++++||......+
T Consensus       259 n~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRd-------yltvkiwDvnm~k~p  314 (460)
T COG5170         259 NSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRD-------YLTVKIWDVNMAKNP  314 (460)
T ss_pred             CchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEec-------cceEEEEecccccCC
Confidence                             11   7788899999999998875       347999999876543

>KOG1275|consensus

Probab=97.88  E-value=0.00016  Score=57.54  Aligned_cols=93  Identities=15%  Similarity=0.197  Sum_probs=76.5

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC---------CcEEEEECCcc------
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED---------CRARIWDLSLC------   89 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~---------~~i~l~d~~~~------   89 (148)
                      ++++..|...|+|.+-|.++.  +.+.++..|++.+..++  -.|+.+++++..         ..+++||++..      
T Consensus       187 nr~lf~G~t~G~V~LrD~~s~--~~iht~~aHs~siSDfD--v~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI  262 (1118)
T KOG1275|consen  187 NRNLFCGDTRGTVFLRDPNSF--ETIHTFDAHSGSISDFD--VQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPI  262 (1118)
T ss_pred             CcEEEeecccceEEeecCCcC--ceeeeeeccccceeeee--ccCCeEEEeecccccccccccchhhhhhhhhhhccCCc
Confidence            788888899999999999998  89999999999997664  478999998854         45899999865      


Q ss_pred             ---------------------------cc---------------------ccceEEEEccCCCEEEEEecCCceecCeeE
Q psy7062          90 ---------------------------FI---------------------QQVNALRITPDKQLLASAEELSCCYCGAAV  121 (148)
Q Consensus        90 ---------------------------~~---------------------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i  121 (148)
                                                 ++                     ..+..+.++++++.++.+..+|      .|
T Consensus       263 ~~~~~P~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g------~v  336 (1118)
T KOG1275|consen  263 QFPYGPQFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEG------HV  336 (1118)
T ss_pred             ccccCchhhhhcccccceEEEEecccceeeccccccCCCccceeEEccCCCcceeEEecCCCceEEEecccC------cE
Confidence                                       00                     3377788899999999999877      89


Q ss_pred             EEeecC
Q psy7062         122 FVYNSC  127 (148)
Q Consensus       122 ~~~d~~  127 (148)
                      .+|--+
T Consensus       337 ~~wa~~  342 (1118)
T KOG1275|consen  337 NLWADR  342 (1118)
T ss_pred             eeecCC
Confidence            999733

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=97.86  E-value=0.00077  Score=50.47  Aligned_cols=92  Identities=9%  Similarity=0.112  Sum_probs=68.3

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCC----cEEEEECCcc-
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDC----RARIWDLSLC-   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~----~i~l~d~~~~-   89 (148)
                      .+++.+++  |+.++++.....+.+.|++++  +....-+..-.-|+.+.|+|++++++.+-.+|    .|+++|...+ 
T Consensus       405 ~av~vs~d--GK~~vvaNdr~el~vididng--nv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~K  480 (668)
T COG4946         405 EAVKVSPD--GKKVVVANDRFELWVIDIDNG--NVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGK  480 (668)
T ss_pred             EEEEEcCC--CcEEEEEcCceEEEEEEecCC--CeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCe
Confidence            44555565  898888666678999999998  43333334567799999999999999987765    6999999886 


Q ss_pred             -cc-----ccceEEEEccCCCEEEEEe
Q psy7062          90 -FI-----QQVNALRITPDKQLLASAE  110 (148)
Q Consensus        90 -~~-----~~i~~~~~sp~~~~l~~~~  110 (148)
                       +.     +.-.+-+|.|++++|.--+
T Consensus       481 iy~vTT~ta~DfsPaFD~d~ryLYfLs  507 (668)
T COG4946         481 IYDVTTPTAYDFSPAFDPDGRYLYFLS  507 (668)
T ss_pred             EEEecCCcccccCcccCCCCcEEEEEe
Confidence             22     4455667888998766554

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=97.85  E-value=0.0017  Score=47.51  Aligned_cols=105  Identities=9%  Similarity=0.110  Sum_probs=72.7

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCC---CceEEecC-------CCCCEEEEEEccCCCEEEEEe----------CCCcEEEE
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNP---NPVINCEG-------VSKNVVEVGFQEDGKWMFTGG----------EDCRARIW   84 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~---~~~~~~~~-------~~~~i~~~~~sp~~~~l~~~~----------~~~~i~l~   84 (148)
                      +..+.+ +.+|+|.+-|+.....   .....+..       ....+..++++|+++.++...          ..+.+.++
T Consensus       206 g~~~~v-s~eG~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~Vi  284 (352)
T TIGR02658       206 GRLVWP-TYTGKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVV  284 (352)
T ss_pred             CcEEEE-ecCCeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEE
Confidence            666666 4559999999644311   22222211       234455699999999777632          22579999


Q ss_pred             ECCcc-----cc--ccceEEEEccCCC-EEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          85 DLSLC-----FI--QQVNALRITPDKQ-LLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        85 d~~~~-----~~--~~i~~~~~sp~~~-~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                      |..+.     +.  .+++.++++||++ +|++.+..     .+.|.++|..+.+.+...
T Consensus       285 D~~t~kvi~~i~vG~~~~~iavS~Dgkp~lyvtn~~-----s~~VsViD~~t~k~i~~i  338 (352)
T TIGR02658       285 DAKTGKRLRKIELGHEIDSINVSQDAKPLLYALSTG-----DKTLYIFDAETGKELSSV  338 (352)
T ss_pred             ECCCCeEEEEEeCCCceeeEEECCCCCeEEEEeCCC-----CCcEEEEECcCCeEEeee
Confidence            99888     22  8899999999999 77777642     237999999988877766

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>KOG1064|consensus

Probab=97.84  E-value=2.7e-05  Score=65.71  Aligned_cols=102  Identities=8%  Similarity=0.182  Sum_probs=74.3

Q ss_pred             ccEEEEEe---cCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-ccccceEEEEc
Q psy7062          25 VEMVAALG---GYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-FIQQVNALRIT  100 (148)
Q Consensus        25 ~~~l~~~~---~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-~~~~i~~~~~s  100 (148)
                      +.++++++   +++.+.+||.--...+.... ..|...++++++-|....+++|+++|.+.+||++.. +.+....  ++
T Consensus      2302 ~s~~~tag~s~d~~n~~lwDtl~~~~~s~v~-~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~~~--~~ 2378 (2439)
T KOG1064|consen 2302 GSLLATAGRSSDNRNVCLWDTLLPPMNSLVH-TCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTFQA--LD 2378 (2439)
T ss_pred             ehhhhccccCCCCCcccchhcccCcccceee-eecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHhhh--hh
Confidence            34555544   34579999986542122222 569999999999999999999999999999999887 4321222  44


Q ss_pred             cCCCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062         101 PDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN  136 (148)
Q Consensus       101 p~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~  136 (148)
                       ...++++++..|      .+++|++..........
T Consensus      2379 -~~~~f~~~ss~g------~ikIw~~s~~~ll~~~p 2407 (2439)
T KOG1064|consen 2379 -TREYFVTGSSEG------NIKIWRLSEFGLLHTFP 2407 (2439)
T ss_pred             -hhheeeccCccc------ceEEEEccccchhhcCc
Confidence             566889999877      89999998776655443

>KOG1334|consensus

Probab=97.84  E-value=0.00013  Score=54.38  Aligned_cols=109  Identities=19%  Similarity=0.261  Sum_probs=82.3

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCC----------CceEE-ecCCCC--CEEEEEE-ccCCCEEEEEeCC
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNP----------NPVIN-CEGVSK--NVVEVGF-QEDGKWMFTGGED   78 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~----------~~~~~-~~~~~~--~i~~~~~-sp~~~~l~~~~~~   78 (148)
                      +..+++|+++. +++|++ .+|-.|.+|.-.-+..          ..+.. +++|..  .|.++.| -|...++++|+.-
T Consensus       338 ~ITgl~Ysh~~-sElLaS-YnDe~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDC  415 (559)
T KOG1334|consen  338 NITGLVYSHDG-SELLAS-YNDEDIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDC  415 (559)
T ss_pred             cceeEEecCCc-cceeee-ecccceEEeccccccCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCcc
Confidence            35789998765 788888 8888898885442211          11222 677753  4777775 5888999999999


Q ss_pred             CcEEEEECCcc--c---c---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          79 CRARIWDLSLC--F---I---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        79 ~~i~l~d~~~~--~---~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                      |.|.+|+=++.  +   +   .-++|+.-+|--..|++++-|-      .|+||-....
T Consensus       416 GhIFiW~K~t~eii~~MegDr~VVNCLEpHP~~PvLAsSGid~------DVKIWTP~~~  468 (559)
T KOG1334|consen  416 GHIFIWDKKTGEIIRFMEGDRHVVNCLEPHPHLPVLASSGIDH------DVKIWTPLTA  468 (559)
T ss_pred             ceEEEEecchhHHHHHhhcccceEeccCCCCCCchhhccCCcc------ceeeecCCcc
Confidence            99999999888  2   2   6688888899999999998766      8999987433

>KOG3914|consensus

Probab=97.83  E-value=8.1e-05  Score=53.89  Aligned_cols=70  Identities=14%  Similarity=0.364  Sum_probs=57.3

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEE-ecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVIN-CEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~-~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~   89 (148)
                      ..++++++  .+.+.++..|..|++-.....  ..+.. +.||+..|..+++-++ ..|++++.|+++++||+.++
T Consensus       155 ~dVavS~D--~~~IitaDRDEkIRvs~ypa~--f~IesfclGH~eFVS~isl~~~-~~LlS~sGD~tlr~Wd~~sg  225 (390)
T KOG3914|consen  155 LDVAVSPD--DQFIITADRDEKIRVSRYPAT--FVIESFCLGHKEFVSTISLTDN-YLLLSGSGDKTLRLWDITSG  225 (390)
T ss_pred             heeeecCC--CCEEEEecCCceEEEEecCcc--cchhhhccccHhheeeeeeccC-ceeeecCCCCcEEEEecccC
Confidence            46777787  689999999999999888765  44544 4579999999988764 44899999999999999987

>KOG1645|consensus

Probab=97.83  E-value=8.7e-05  Score=54.05  Aligned_cols=87  Identities=14%  Similarity=0.177  Sum_probs=65.7

Q ss_pred             EEEEeCCCCCCCceEEecCCCCCEEEEEEccCCC-EEEEEeCCCcEEEEECCcc-----cc--ccceEEEEccCCC-EEE
Q psy7062          37 IRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGK-WMFTGGEDCRARIWDLSLC-----FI--QQVNALRITPDKQ-LLA  107 (148)
Q Consensus        37 v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~~~~~i~l~d~~~~-----~~--~~i~~~~~sp~~~-~l~  107 (148)
                      +++.+..+.  +...-+.++...|..++|||..+ .+..++.+.+|++.|+++.     +.  ..+++.+|.-+.. ++.
T Consensus       175 v~~l~~~~f--kssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~~~~wSC~wDlde~h~IY  252 (463)
T KOG1645|consen  175 VQKLESHDF--KSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAYNQIWSCCWDLDERHVIY  252 (463)
T ss_pred             eEEeccCCc--chhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheeccCCceeeeeccCCcceeE
Confidence            444444444  44445566788899999999877 6788999999999999988     22  8899999998666 455


Q ss_pred             EEecCCceecCeeEEEeecCCCcc
Q psy7062         108 SAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus       108 ~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                      .|-..|      .|.+||.+.++.
T Consensus       253 aGl~nG------~VlvyD~R~~~~  270 (463)
T KOG1645|consen  253 AGLQNG------MVLVYDMRQPEG  270 (463)
T ss_pred             EeccCc------eEEEEEccCCCc
Confidence            555544      899999997764

>KOG4532|consensus

Probab=97.83  E-value=0.0021  Score=44.95  Aligned_cols=110  Identities=15%  Similarity=0.062  Sum_probs=78.8

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEe-cCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINC-EGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~-~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---   89 (148)
                      ...++++++  +..+++.++...|..|.++......+... ...+..=.+.+|+.....++++..||++-+||++..   
T Consensus       161 ~ns~~~snd--~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tp  238 (344)
T KOG4532|consen  161 QNSLHYSND--PSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATP  238 (344)
T ss_pred             eeeeEEcCC--CceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEecccccc
Confidence            466777777  77778878888999999986532333322 222334456788999999999999999999999876   


Q ss_pred             --cc--------ccceEEEEccCCC--EEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          90 --FI--------QQVNALRITPDKQ--LLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        90 --~~--------~~i~~~~~sp~~~--~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                        ..        +.++.+.|++.|.  +|+..-.      ...+.+.|.++...
T Consensus       239 m~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEh------fs~~hv~D~R~~~~  286 (344)
T KOG4532|consen  239 MAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEH------FSRVHVVDTRNYVN  286 (344)
T ss_pred             hhhhcccCCCCCCceEEEEecCCCcceEEEEecC------cceEEEEEcccCce
Confidence              11        7889999998664  4444433      33789999887654

>KOG3621|consensus

Probab=97.77  E-value=0.00023  Score=55.12  Aligned_cols=102  Identities=16%  Similarity=0.132  Sum_probs=79.4

Q ss_pred             EEEeCCCCccEEEEEecCCeEEEEeCCCCCCCce-EEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc------
Q psy7062          17 TVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPV-INCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC------   89 (148)
Q Consensus        17 ~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~-~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~------   89 (148)
                      .++|..  +++++.|+..|.+.+|+-..+  ..+ ....+....+....++++..+++.|+-.|.|.++-++..      
T Consensus        39 Tc~dst--~~~l~~GsS~G~lyl~~R~~~--~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~  114 (726)
T KOG3621|consen   39 TCVDAT--EEYLAMGSSAGSVYLYNRHTG--EMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLD  114 (726)
T ss_pred             EEeecC--CceEEEecccceEEEEecCch--hhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcce
Confidence            344555  899999999999999998877  332 333334556677788999999999999999999988766      


Q ss_pred             -cc-------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062          90 -FI-------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        90 -~~-------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                       +.       .+|++++|++++..+.+|...|      +|..-.+.+
T Consensus       115 ~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~G------kv~~~~L~s  155 (726)
T KOG3621|consen  115 YVTPCDKSHKCRVTALEWSKNGMKLYSGDSQG------KVVLTELDS  155 (726)
T ss_pred             eeccccccCCceEEEEEecccccEEeecCCCc------eEEEEEech
Confidence             11       6799999999999999999877      666655543

>KOG2315|consensus

Probab=97.76  E-value=0.002  Score=48.84  Aligned_cols=113  Identities=12%  Similarity=0.085  Sum_probs=78.4

Q ss_pred             cEEEEEeCCCCccEEEEEec-C---------CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEE--EeCCCcE
Q psy7062          14 QISTVFDSKHLVEMVAALGG-Y---------QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFT--GGEDCRA   81 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~-d---------~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~--~~~~~~i   81 (148)
                      .....|.+...+-++++.++ |         .++.+.+++..  .....+. -.+.|-++.|+|+++-++.  |=.-..+
T Consensus       220 kvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~--s~~V~L~-k~GPVhdv~W~~s~~EF~VvyGfMPAkv  296 (566)
T KOG2315|consen  220 KVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGE--SVSVPLL-KEGPVHDVTWSPSGREFAVVYGFMPAKV  296 (566)
T ss_pred             eeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCc--eEEEecC-CCCCceEEEECCCCCEEEEEEecccceE
Confidence            35667777665555544221 1         25666677632  3344443 4788999999999986544  4445789


Q ss_pred             EEEECCcc----cc-ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062          82 RIWDLSLC----FI-QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV  132 (148)
Q Consensus        82 ~l~d~~~~----~~-~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~  132 (148)
                      -+||++..    |. ++-+++-|+|.|++++.++.+.   -.+.+-+||+.+.+.+
T Consensus       297 tifnlr~~~v~df~egpRN~~~fnp~g~ii~lAGFGN---L~G~mEvwDv~n~K~i  349 (566)
T KOG2315|consen  297 TIFNLRGKPVFDFPEGPRNTAFFNPHGNIILLAGFGN---LPGDMEVWDVPNRKLI  349 (566)
T ss_pred             EEEcCCCCEeEeCCCCCccceEECCCCCEEEEeecCC---CCCceEEEeccchhhc
Confidence            99999876    33 8889999999999988888654   3457999998875544

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=97.75  E-value=0.0023  Score=53.27  Aligned_cols=107  Identities=14%  Similarity=0.147  Sum_probs=73.6

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCC---------------CCCEEEEEEccCCCEE-EEEe
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGV---------------SKNVVEVGFQEDGKWM-FTGG   76 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~---------------~~~i~~~~~sp~~~~l-~~~~   76 (148)
                      .+..+++++.. +.++++.+.++.|++||..++  . +..+.+.               -....+++++|+++.+ ++.+
T Consensus       684 ~P~gVa~dp~~-g~LyVad~~~~~I~v~d~~~g--~-v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs  759 (1057)
T PLN02919        684 SPWDVCFEPVN-EKVYIAMAGQHQIWEYNISDG--V-TRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADS  759 (1057)
T ss_pred             CCeEEEEecCC-CeEEEEECCCCeEEEEECCCC--e-EEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEEC
Confidence            35678888842 667777677889999999876  2 2222111               1245679999999855 4555


Q ss_pred             CCCcEEEEECCcc---c-c-------------------------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          77 EDCRARIWDLSLC---F-I-------------------------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        77 ~~~~i~l~d~~~~---~-~-------------------------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                      .++.|++||+.++   + .                         .....++++++|+.+++-..++      +|++||..
T Consensus       760 ~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~------rIrviD~~  833 (1057)
T PLN02919        760 ESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNH------KIKKLDPA  833 (1057)
T ss_pred             CCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCC------EEEEEECC
Confidence            6789999998753   0 0                         1346788999998776666655      89999986


Q ss_pred             CC
Q psy7062         128 YP  129 (148)
Q Consensus       128 ~~  129 (148)
                      +.
T Consensus       834 tg  835 (1057)
T PLN02919        834 TK  835 (1057)
T ss_pred             CC
Confidence            54

>KOG2041|consensus

Probab=97.72  E-value=0.00075  Score=52.93  Aligned_cols=97  Identities=14%  Similarity=0.172  Sum_probs=78.0

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCC-------------CceEEecCCCCCEEEEEEccCCCEEEEEeCCCcE
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNP-------------NPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRA   81 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~-------------~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i   81 (148)
                      .++.|.-.  ..+++.|+.||.+++..+.+...             ..-.++.+|...|.-+-|+-+...+.+.+.+|.|
T Consensus        18 ~c~~WNke--~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~GlI   95 (1189)
T KOG2041|consen   18 HCAEWNKE--SGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSGLI   95 (1189)
T ss_pred             EEEEEccc--CCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCCceE
Confidence            56777766  78999999999999998865421             1123567899999999999999999999999999


Q ss_pred             EEEECCcc------cc----ccceEEEEccCCCEEEEEecCC
Q psy7062          82 RIWDLSLC------FI----QQVNALRITPDKQLLASAEELS  113 (148)
Q Consensus        82 ~l~d~~~~------~~----~~i~~~~~sp~~~~l~~~~~d~  113 (148)
                      .+|=+-.+      ..    +-+.+++|+.+|+.+...=.||
T Consensus        96 iVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDG  137 (1189)
T KOG2041|consen   96 IVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDG  137 (1189)
T ss_pred             EEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccC
Confidence            99999877      11    6688999999998877766666

>KOG1354|consensus

Probab=97.70  E-value=0.00027  Score=50.71  Aligned_cols=107  Identities=7%  Similarity=0.167  Sum_probs=76.1

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCc---------------------------------eEEe-cCCCCCE
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNP---------------------------------VINC-EGVSKNV   60 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~---------------------------------~~~~-~~~~~~i   60 (148)
                      ....|..+.+...+.....|.++++|.+.....+.                                 .+.+ .+|+..|
T Consensus        88 nkIrw~~~~n~a~FLlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhi  167 (433)
T KOG1354|consen   88 NKIRWLDDGNLAEFLLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHI  167 (433)
T ss_pred             hhceecCCCCccEEEEecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEe
Confidence            45566555555555554899999999986542111                                 1112 2477889


Q ss_pred             EEEEEccCCCEEEEEeCCCcEEEEECCcc---cc-------------ccceEEEEcc-CCCEEEEEecCCceecCeeEEE
Q psy7062          61 VEVGFQEDGKWMFTGGEDCRARIWDLSLC---FI-------------QQVNALRITP-DKQLLASAEELSCCYCGAAVFV  123 (148)
Q Consensus        61 ~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---~~-------------~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~  123 (148)
                      .+++++.|+..+++++ |=.|.+|++...   |.             .-|++..||| ....++-.+..|      .|++
T Consensus       168 NSIS~NsD~Et~lSAD-dLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKG------tIrL  240 (433)
T KOG1354|consen  168 NSISVNSDKETFLSAD-DLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKG------TIRL  240 (433)
T ss_pred             eeeeecCccceEeecc-ceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCC------cEEE
Confidence            9999999999999885 557889988654   11             5578889999 456777777756      8999


Q ss_pred             eecCC
Q psy7062         124 YNSCY  128 (148)
Q Consensus       124 ~d~~~  128 (148)
                      .|.+.
T Consensus       241 cDmR~  245 (433)
T KOG1354|consen  241 CDMRQ  245 (433)
T ss_pred             eechh
Confidence            99884

>KOG0309|consensus

Probab=97.65  E-value=0.00015  Score=56.69  Aligned_cols=100  Identities=12%  Similarity=0.179  Sum_probs=75.2

Q ss_pred             CccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc------cc---ccc
Q psy7062          24 LVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC------FI---QQV   94 (148)
Q Consensus        24 ~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~------~~---~~i   94 (148)
                      ....+++++.|..+..||+++.. .++.....-......++|+...-.++..+....+++||.+.+      ++   ..+
T Consensus       126 ~pdVlatcsvdt~vh~wd~rSp~-~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i~vwd~r~gs~pl~s~K~~vs~v  204 (1081)
T KOG0309|consen  126 HPDVLATCSVDTYVHAWDMRSPH-RPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDIFVWDLRKGSTPLCSLKGHVSSV  204 (1081)
T ss_pred             CCcceeeccccccceeeeccCCC-cceeeeecccccCceeeecccCcchhhhccCCceEEEeccCCCcceEEecccceee
Confidence            37889999999999999999873 566666555566778999985555555566778999999987      33   556


Q ss_pred             eEEEEcc-CCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          95 NALRITP-DKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        95 ~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                      ..+.|.. -...+.+.+.|+      +|++||.....
T Consensus       205 n~~~fnr~~~s~~~s~~~d~------tvkfw~y~kSt  235 (1081)
T KOG0309|consen  205 NSIDFNRFKYSEIMSSSNDG------TVKFWDYSKST  235 (1081)
T ss_pred             ehHHHhhhhhhhhcccCCCC------ceeeecccccc
Confidence            6667765 344677888888      99999977543

>KOG1334|consensus

Probab=97.64  E-value=0.00022  Score=53.16  Aligned_cols=107  Identities=19%  Similarity=0.247  Sum_probs=82.6

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCce-EEecCCCCCEEEEEEccC--CCEEEEEeCCCcEEEEECCcc--
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPV-INCEGVSKNVVEVGFQED--GKWMFTGGEDCRARIWDLSLC--   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~-~~~~~~~~~i~~~~~sp~--~~~l~~~~~~~~i~l~d~~~~--   89 (148)
                      +.+-|...  |..|++++.|..+.+||....  ++. .-..+|...|...+|-|.  .+.+++++.||.+++-.+...  
T Consensus       146 ntV~FN~~--Gd~l~SgSDD~~vv~WdW~~~--~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~i~~t~~  221 (559)
T KOG1334|consen  146 NTVHFNQR--GDVLASGSDDLQVVVWDWVSG--SPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSEILETGY  221 (559)
T ss_pred             ceeeeccc--CceeeccCccceEEeehhhcc--CcccccccccccchhhhhccCCCCCcCceeccccCceeeeeeccccc
Confidence            44445555  999999999999999999887  444 444579888888889883  468999999999998877543  


Q ss_pred             ------cc---ccceEEEEccCC-CEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          90 ------FI---QQVNALRITPDK-QLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        90 ------~~---~~i~~~~~sp~~-~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                            +.   +++..++.-|+. ..|.+++.|+      .+.-+|++...+
T Consensus       222 ~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~------~v~~~Dlr~~~p  267 (559)
T KOG1334|consen  222 VENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDA------VVFHIDLRQDVP  267 (559)
T ss_pred             eecceecccccCccceeeecCCCCCccccccccc------ceeeeeeccCCc
Confidence                  11   889999999955 5788888888      677778776543

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=97.62  E-value=0.007  Score=43.68  Aligned_cols=114  Identities=12%  Similarity=0.132  Sum_probs=77.6

Q ss_pred             eecCcEEEEEeCCCCccEEEEEecC---CeEEEEeCCC--CCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC-CcEEE
Q psy7062          10 TAFGQISTVFDSKHLVEMVAALGGY---QHIRMYDFGS--NNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED-CRARI   83 (148)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~l~~~~~d---~~v~~~d~~~--~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~-~~i~l   83 (148)
                      ...++.-++++++  .+.|.++..+   +.+--|.++.  +....+..........+.++++++|++++++... +.+.+
T Consensus        38 ~~~nptyl~~~~~--~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v  115 (346)
T COG2706          38 ELGNPTYLAVNPD--QRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHSGSVSV  115 (346)
T ss_pred             ccCCCceEEECCC--CCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEEccCceEEE
Confidence            3445677888887  6666665544   4677776664  4222333333334445889999999999998864 78999


Q ss_pred             EECCcc---------cc--cc----------ceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          84 WDLSLC---------FI--QQ----------VNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        84 ~d~~~~---------~~--~~----------i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                      +-++..         +.  .+          +....++|++++|++..-     +..+|.+|++....
T Consensus       116 ~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DL-----G~Dri~~y~~~dg~  178 (346)
T COG2706         116 YPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDL-----GTDRIFLYDLDDGK  178 (346)
T ss_pred             EEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeec-----CCceEEEEEcccCc
Confidence            998663         11  22          778899999999888764     24579999988544

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=97.55  E-value=0.014  Score=42.10  Aligned_cols=108  Identities=11%  Similarity=0.203  Sum_probs=75.2

Q ss_pred             cCcEEEEEeCCCCccEEEEE-ecCCeEEEEeCCCCCCCceEEecC---------CCCCEEEEEEccCCCEEEEEeCC-Cc
Q psy7062          12 FGQISTVFDSKHLVEMVAAL-GGYQHIRMYDFGSNNPNPVINCEG---------VSKNVVEVGFQEDGKWMFTGGED-CR   80 (148)
Q Consensus        12 ~~~~~~~~~~~~~~~~l~~~-~~d~~v~~~d~~~~~~~~~~~~~~---------~~~~i~~~~~sp~~~~l~~~~~~-~~   80 (148)
                      .|+.-++|+|+  +++.... -.+++|.+|..+... ..+..++.         -......|.++|||++|..+.+. ..
T Consensus       191 ~GPRHi~FHpn--~k~aY~v~EL~stV~v~~y~~~~-g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~ds  267 (346)
T COG2706         191 AGPRHIVFHPN--GKYAYLVNELNSTVDVLEYNPAV-GKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDS  267 (346)
T ss_pred             CCcceEEEcCC--CcEEEEEeccCCEEEEEEEcCCC-ceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCe
Confidence            46788999999  5554443 467899999998741 22333322         13567788999999999887653 46


Q ss_pred             EEEEECCcc---cc---------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          81 ARIWDLSLC---FI---------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        81 i~l~d~~~~---~~---------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                      |-+|.+...   +.         ...+.+.++|++++|+++..++     ..|.+|...
T Consensus       268 I~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~s-----d~i~vf~~d  321 (346)
T COG2706         268 IAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKS-----DNITVFERD  321 (346)
T ss_pred             EEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCC-----CcEEEEEEc
Confidence            777777543   11         4478899999999999999866     246666544

>KOG0309|consensus

Probab=97.51  E-value=0.00048  Score=54.06  Aligned_cols=111  Identities=15%  Similarity=0.277  Sum_probs=80.3

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCce-EEecCCCCCEEEEEEccCC-CEEEEEeCCCcEEEEECCcc---
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPV-INCEGVSKNVVEVGFQEDG-KWMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~-~~~~~~~~~i~~~~~sp~~-~~l~~~~~~~~i~l~d~~~~---   89 (148)
                      ..+-|++.....+-++......-.+|++.-...+.+ ..+-+|+..|+.+.|+|.. ..+++++-|-.++.||+++.   
T Consensus        71 ad~qws~h~a~~~wiVsts~qkaiiwnlA~ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p  150 (1081)
T KOG0309|consen   71 ADVQWSPHPAKPYWIVSTSNQKAIIWNLAKSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRP  150 (1081)
T ss_pred             cceecccCCCCceeEEecCcchhhhhhhhcCCccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcc
Confidence            345566655566666656677888999865422333 3556899999999999965 47899999999999999988   


Q ss_pred             cc------ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062          90 FI------QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNSCYPAAV  132 (148)
Q Consensus        90 ~~------~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~  132 (148)
                      +.      .+...++|+. ++..+++ +.      +..|.+||.+....+
T Consensus       151 ~ys~~~w~s~asqVkwnyk~p~vlas-sh------g~~i~vwd~r~gs~p  193 (1081)
T KOG0309|consen  151 FYSTSSWRSAASQVKWNYKDPNVLAS-SH------GNDIFVWDLRKGSTP  193 (1081)
T ss_pred             eeeeecccccCceeeecccCcchhhh-cc------CCceEEEeccCCCcc
Confidence            21      6678899987 5555544 43      226999999987654

>KOG1275|consensus

Probab=97.49  E-value=0.00079  Score=53.86  Aligned_cols=118  Identities=14%  Similarity=0.059  Sum_probs=83.7

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc-ccceEEE
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI-QQVNALR   98 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~-~~i~~~~   98 (148)
                      +..+..|+-...+..+|+++.  +..+...-..+.++-+  ..+++.+.+|+..|+|.+-|.++.     |. ..-.-..
T Consensus       147 ~~~~i~Gg~Q~~li~~Dl~~~--~e~r~~~v~a~~v~im--R~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSD  222 (1118)
T KOG1275|consen  147 PSTLIMGGLQEKLIHIDLNTE--KETRTTNVSASGVTIM--RYNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISD  222 (1118)
T ss_pred             Ccceeecchhhheeeeecccc--eeeeeeeccCCceEEE--EecCcEEEeecccceEEeecCCcCceeeeeeccccceee
Confidence            455667666667777799876  3333332223345444  557899999999999999999987     33 2223345


Q ss_pred             EccCCCEEEEEecCCce---ecCeeEEEeecCCCcceeccCcccCcceeec
Q psy7062          99 ITPDKQLLASAEELSCC---YCGAAVFVYNSCYPAAVVASNTLVKPQVTRA  146 (148)
Q Consensus        99 ~sp~~~~l~~~~~d~~~---~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~  146 (148)
                      |+-.|+.|++++.....   +....|++||+++.+....++..+.|++.|.
T Consensus       223 fDv~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P~flrf  273 (1118)
T KOG1275|consen  223 FDVQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGPQFLRF  273 (1118)
T ss_pred             eeccCCeEEEeecccccccccccchhhhhhhhhhhccCCcccccCchhhhh
Confidence            55689999998765432   3456799999999999999998999988664

>PRK04043 tolB translocation protein TolB; Provisional

Probab=97.46  E-value=0.011  Score=44.54  Aligned_cols=105  Identities=10%  Similarity=0.038  Sum_probs=65.0

Q ss_pred             EEEEEeCCCCccEEEEEe-cCC--eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC---------CcEE
Q psy7062          15 ISTVFDSKHLVEMVAALG-GYQ--HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED---------CRAR   82 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~-~d~--~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~---------~~i~   82 (148)
                      ....|+|+  |+.++..+ ..+  .|.+.|+.++  +..+... ....  ...|+|||+.++.....         ..+.
T Consensus       280 ~~p~~SPD--G~~I~F~Sdr~g~~~Iy~~dl~~g--~~~rlt~-~g~~--~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~  352 (419)
T PRK04043        280 VNGNFVED--DKRIVFVSDRLGYPNIFMKKLNSG--SVEQVVF-HGKN--NSSVSTYKNYIVYSSRETNNEFGKNTFNLY  352 (419)
T ss_pred             CccEECCC--CCEEEEEECCCCCceEEEEECCCC--CeEeCcc-CCCc--CceECCCCCEEEEEEcCCCcccCCCCcEEE
Confidence            34568888  55444434 223  5777788876  3322221 1111  24899999988665543         2577


Q ss_pred             EEECCcc----cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          83 IWDLSLC----FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        83 l~d~~~~----~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                      +.|+.++    +.  .......|+|||+.++.....+   ....+...++...
T Consensus       353 v~d~~~g~~~~LT~~~~~~~p~~SPDG~~I~f~~~~~---~~~~L~~~~l~g~  402 (419)
T PRK04043        353 LISTNSDYIRRLTANGVNQFPRFSSDGGSIMFIKYLG---NQSALGIIRLNYN  402 (419)
T ss_pred             EEECCCCCeEECCCCCCcCCeEECCCCCEEEEEEccC---CcEEEEEEecCCC
Confidence            8888776    33  3334578999999888877654   3445777787643

>KOG1912|consensus

Probab=97.43  E-value=0.00073  Score=53.30  Aligned_cols=96  Identities=14%  Similarity=0.109  Sum_probs=77.6

Q ss_pred             cEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEE---------eCCCcEEEEECCcc----cc-
Q psy7062          26 EMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTG---------GEDCRARIWDLSLC----FI-   91 (148)
Q Consensus        26 ~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~---------~~~~~i~l~d~~~~----~~-   91 (148)
                      .+++.|.+.|+|.++|+.++  ..-+.+..|++.|.++.|-...+++-.+         ..-+.+.+-|++++    |. 
T Consensus       438 pLvAvGT~sGTV~vvdvst~--~v~~~fsvht~~VkgleW~g~sslvSfsys~~n~~sg~vrN~l~vtdLrtGlsk~fR~  515 (1062)
T KOG1912|consen  438 PLVAVGTNSGTVDVVDVSTN--AVAASFSVHTSLVKGLEWLGNSSLVSFSYSHVNSASGGVRNDLVVTDLRTGLSKRFRG  515 (1062)
T ss_pred             eeEEeecCCceEEEEEecch--hhhhhhcccccceeeeeeccceeEEEeeeccccccccceeeeEEEEEccccccccccc
Confidence            46889999999999999998  6777888899999999997766654222         12246889999998    32 


Q ss_pred             ------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          92 ------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        92 ------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                            .+|..+..+..+++|+....+.      -+.+||+++.
T Consensus       516 l~~~despI~~irvS~~~~yLai~Fr~~------plEiwd~kt~  553 (1062)
T KOG1912|consen  516 LQKPDESPIRAIRVSSSGRYLAILFRRE------PLEIWDLKTL  553 (1062)
T ss_pred             CCCCCcCcceeeeecccCceEEEEeccc------chHHHhhccc
Confidence                  8899999999999999999877      7889998543

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=97.42  E-value=0.0024  Score=52.38  Aligned_cols=104  Identities=15%  Similarity=0.097  Sum_probs=71.1

Q ss_pred             EEEEEeCCCCccEEEEEec---C---CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeC---CCcEEEEE
Q psy7062          15 ISTVFDSKHLVEMVAALGG---Y---QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE---DCRARIWD   85 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~---d---~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~---~~~i~l~d   85 (148)
                      ..+..+.+++|+++|+.+-   .   +.+|+|+-+ +  ....+.+.-.+--..++|.|.|+++++...   ...|.+|.
T Consensus       211 ~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G--~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfE  287 (928)
T PF04762_consen  211 GRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-G--ELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFE  287 (928)
T ss_pred             CceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-c--eEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEe
Confidence            4445556666999999764   2   479999987 3  333333333334467899999999988765   23455665


Q ss_pred             CCcc----cc-------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062          86 LSLC----FI-------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        86 ~~~~----~~-------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                      -+..    |.       ..+..+.|++++..|+....|.       |.+|-..+
T Consensus       288 rNGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-------vqLWt~~N  334 (928)
T PF04762_consen  288 RNGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-------VQLWTRSN  334 (928)
T ss_pred             cCCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecCC-------ceEEEeeC
Confidence            4432    22       6789999999999999977544       78886543

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=97.41  E-value=0.019  Score=39.68  Aligned_cols=112  Identities=15%  Similarity=0.131  Sum_probs=69.5

Q ss_pred             eecCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEec--C-CCCCEEEEEEccCCCEEEEEeCC--------
Q psy7062          10 TAFGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCE--G-VSKNVVEVGFQEDGKWMFTGGED--------   78 (148)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~--~-~~~~i~~~~~sp~~~~l~~~~~~--------   78 (148)
                      ...++..++++... +.++++ .. +.+.++|.+++..+.+....  . .....+.+++.|+|+..++....        
T Consensus        38 ~~~~~~G~~~~~~~-g~l~v~-~~-~~~~~~d~~~g~~~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~  114 (246)
T PF08450_consen   38 DLPGPNGMAFDRPD-GRLYVA-DS-GGIAVVDPDTGKVTVLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDP  114 (246)
T ss_dssp             ESSSEEEEEEECTT-SEEEEE-ET-TCEEEEETTTTEEEEEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGS
T ss_pred             ecCCCceEEEEccC-CEEEEE-Ec-CceEEEecCCCcEEEEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccc
Confidence            34456777877432 555555 54 44555599887323333332  1 34568899999999977776543        


Q ss_pred             CcEEEEECCcc----cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          79 CRARIWDLSLC----FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        79 ~~i~l~d~~~~----~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                      +.+..++....    ..  ...+.++|+|+++.|..+...     ..+|..+++...
T Consensus       115 g~v~~~~~~~~~~~~~~~~~~pNGi~~s~dg~~lyv~ds~-----~~~i~~~~~~~~  166 (246)
T PF08450_consen  115 GSVYRIDPDGKVTVVADGLGFPNGIAFSPDGKTLYVADSF-----NGRIWRFDLDAD  166 (246)
T ss_dssp             EEEEEEETTSEEEEEEEEESSEEEEEEETTSSEEEEEETT-----TTEEEEEEEETT
T ss_pred             cceEEECCCCeEEEEecCcccccceEECCcchheeecccc-----cceeEEEecccc
Confidence            45777777722    22  667889999999987765432     226888887643

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>KOG1832|consensus

Probab=97.41  E-value=0.00023  Score=56.91  Aligned_cols=111  Identities=15%  Similarity=0.154  Sum_probs=84.9

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCC--cEEEEECCcccc
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDC--RARIWDLSLCFI   91 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~--~i~l~d~~~~~~   91 (148)
                      -.+++|+..  .+.|++|+-.|.|++|++.++  ........|.+.++.+.=+.+|..+++.+...  ..-+|+..+-+.
T Consensus      1104 fTc~afs~~--~~hL~vG~~~Geik~~nv~sG--~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~s~~~ 1179 (1516)
T KOG1832|consen 1104 FTCIAFSGG--TNHLAVGSHAGEIKIFNVSSG--SMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDASSTGG 1179 (1516)
T ss_pred             eeeEEeecC--CceEEeeeccceEEEEEccCc--cccccccccccccccccccCCcceeeeeccccCchHHHhccccccC
Confidence            467888877  788999999999999999999  77778888999999999899999887765433  466999976521


Q ss_pred             -----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceec
Q psy7062          92 -----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVA  134 (148)
Q Consensus        92 -----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~  134 (148)
                           ..-.++.|+...++-+.|+...      ...+||+.+..+...
T Consensus      1180 ~~Hsf~ed~~vkFsn~~q~r~~gt~~d------~a~~YDvqT~~~l~t 1221 (1516)
T KOG1832|consen 1180 PRHSFDEDKAVKFSNSLQFRALGTEAD------DALLYDVQTCSPLQT 1221 (1516)
T ss_pred             ccccccccceeehhhhHHHHHhccccc------ceEEEecccCcHHHH
Confidence                 4567788887665555555422      689999987665544

>KOG2314|consensus

Probab=97.40  E-value=0.002  Score=49.03  Aligned_cols=112  Identities=11%  Similarity=0.035  Sum_probs=76.8

Q ss_pred             cEEEEEeCCCCccEEEEEecC-----------CeEEEEeCCCCCCCceEEecC---CCCCEEEEEEccCCCEEEEEeCCC
Q psy7062          14 QISTVFDSKHLVEMVAALGGY-----------QHIRMYDFGSNNPNPVINCEG---VSKNVVEVGFQEDGKWMFTGGEDC   79 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d-----------~~v~~~d~~~~~~~~~~~~~~---~~~~i~~~~~sp~~~~l~~~~~~~   79 (148)
                      ..-+.|+|.  ..+|++-+..           ..+.+||+.++  ...+.+..   .-....-+.||.|+++++--.. .
T Consensus       252 Vq~idfSP~--EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG--~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~  326 (698)
T KOG2314|consen  252 VQFIDFSPN--EKYLVTYSPEPIIVEEDDNEGQQLIIWDIATG--LLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG-N  326 (698)
T ss_pred             ceeeecCCc--cceEEEecCCccccCcccCCCceEEEEEcccc--chhcceeccCCCccccceEEeccCCceeEEecc-c
Confidence            445666676  7888885422           47999999999  66666654   2233456799999999987665 5


Q ss_pred             cEEEEECCcc-------cc-ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          80 RARIWDLSLC-------FI-QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        80 ~i~l~d~~~~-------~~-~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                      .|.+|+..+.       +. ..|..+.|+|.++.|+-=...- -....++.+..+++.+.
T Consensus       327 sisIyEtpsf~lld~Kslki~gIr~FswsP~~~llAYwtpe~-~~~parvtL~evPs~~~  385 (698)
T KOG2314|consen  327 SISIYETPSFMLLDKKSLKISGIRDFSWSPTSNLLAYWTPET-NNIPARVTLMEVPSKRE  385 (698)
T ss_pred             eEEEEecCceeeecccccCCccccCcccCCCcceEEEEcccc-cCCcceEEEEecCccce
Confidence            7999999887       22 8899999999988887644311 01234555666554443

>KOG4640|consensus

Probab=97.39  E-value=0.0015  Score=50.33  Aligned_cols=72  Identities=18%  Similarity=0.155  Sum_probs=58.6

Q ss_pred             CCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----c--c-ccc-eEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062          57 SKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----F--I-QQV-NALRITPDKQLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        57 ~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----~--~-~~i-~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                      ...+.-+.|+|.-..++.+..+|.+-++-++-.    +  . ..+ .+++|.|||+.|+.|-.||      +|++.|+.+
T Consensus        20 ~~~i~~~ewnP~~dLiA~~t~~gelli~R~n~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG------~I~L~Dve~   93 (665)
T KOG4640|consen   20 PINIKRIEWNPKMDLIATRTEKGELLIHRLNWQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDG------TIRLHDVEK   93 (665)
T ss_pred             ccceEEEEEcCccchhheeccCCcEEEEEeccceeEeccCCCCccceeeeecCCCCEEEEEecCC------eEEEEEccC
Confidence            566888999999999999999998776666533    2  2 334 4999999999999999998      999999998


Q ss_pred             Ccceec
Q psy7062         129 PAAVVA  134 (148)
Q Consensus       129 ~~~~~~  134 (148)
                      +...+.
T Consensus        94 ~~~l~~   99 (665)
T KOG4640|consen   94 GGRLVS   99 (665)
T ss_pred             CCceec
Confidence            776554

>KOG1645|consensus

Probab=97.35  E-value=0.002  Score=47.22  Aligned_cols=72  Identities=10%  Similarity=0.144  Sum_probs=58.1

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCC-EEEEEeCCCcEEEEECCcc
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGK-WMFTGGEDCRARIWDLSLC   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~~~~~i~l~d~~~~   89 (148)
                      ...++|+|.. ..++..++.+..|++.|+++.  ..+.++..+ ..+.+++|+.|.. +++.|..+|.+.+||.+..
T Consensus       196 IrdlafSp~~-~GLl~~asl~nkiki~dlet~--~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~~  268 (463)
T KOG1645|consen  196 IRDLAFSPFN-EGLLGLASLGNKIKIMDLETS--CVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQP  268 (463)
T ss_pred             hhhhccCccc-cceeeeeccCceEEEEecccc--eeeeheecc-CCceeeeeccCCcceeEEeccCceEEEEEccCC
Confidence            3567777764 446777799999999999998  677777766 7788999998655 7788889999999999876

>KOG2314|consensus

Probab=97.28  E-value=0.0038  Score=47.66  Aligned_cols=92  Identities=17%  Similarity=0.151  Sum_probs=69.0

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeC-----------CCcEEE
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE-----------DCRARI   83 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-----------~~~i~l   83 (148)
                      .-+.|+|.  |.+|++ -...-|-+|-=++.  ..+..+. | ..|..++|||..++|++=+.           ...+++
T Consensus       214 tyv~wSP~--GTYL~t-~Hk~GI~lWGG~~f--~r~~RF~-H-p~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~I  286 (698)
T KOG2314|consen  214 TYVRWSPK--GTYLVT-FHKQGIALWGGESF--DRIQRFY-H-PGVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLII  286 (698)
T ss_pred             eeEEecCC--ceEEEE-EeccceeeecCccH--HHHHhcc-C-CCceeeecCCccceEEEecCCccccCcccCCCceEEE
Confidence            45678888  999999 66677889977766  5666664 5 45788999999999998553           146999


Q ss_pred             EECCcc-----cc-----ccce-EEEEccCCCEEEEEecCC
Q psy7062          84 WDLSLC-----FI-----QQVN-ALRITPDKQLLASAEELS  113 (148)
Q Consensus        84 ~d~~~~-----~~-----~~i~-~~~~sp~~~~l~~~~~d~  113 (148)
                      ||+.++     |.     ..++ -+.||-|.++++.-..++
T Consensus       287 WDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~~s  327 (698)
T KOG2314|consen  287 WDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTGNS  327 (698)
T ss_pred             EEccccchhcceeccCCCccccceEEeccCCceeEEeccce
Confidence            999998     22     2222 358999999998887644

>PRK02888 nitrous-oxide reductase; Validated

Probab=97.22  E-value=0.023  Score=44.50  Aligned_cols=94  Identities=15%  Similarity=0.077  Sum_probs=69.5

Q ss_pred             ccEEEEEecCCeEEEEeCCC----CCCCceEEecCCCCCEEEEEEccCCCEEEEEeC-CCcEEEEECCcc---c------
Q psy7062          25 VEMVAALGGYQHIRMYDFGS----NNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE-DCRARIWDLSLC---F------   90 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~----~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-~~~i~l~d~~~~---~------   90 (148)
                      |++...  .++.|.+.|..+    . .+.+..+. -....-+++++|||++++.++. ++++.+.|+.+.   |      
T Consensus       288 GK~~~V--~gn~V~VID~~t~~~~~-~~v~~yIP-VGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~  363 (635)
T PRK02888        288 GKFKTI--GGSKVPVVDGRKAANAG-SALTRYVP-VPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKP  363 (635)
T ss_pred             CCEEEE--CCCEEEEEECCccccCC-cceEEEEE-CCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCc
Confidence            444444  257899999987    2 14555555 4566778999999998866554 789999999875   1      


Q ss_pred             --------c--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062          91 --------I--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        91 --------~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                              +  ......+|.++|....+..-|.      +|..||+..
T Consensus       364 ~~~vvaevevGlGPLHTaFDg~G~aytslf~ds------qv~kwn~~~  405 (635)
T PRK02888        364 RDAVVAEPELGLGPLHTAFDGRGNAYTTLFLDS------QIVKWNIEA  405 (635)
T ss_pred             cceEEEeeccCCCcceEEECCCCCEEEeEeecc------eeEEEehHH
Confidence                    1  5567789999988777777766      899999875

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=97.22  E-value=0.021  Score=40.16  Aligned_cols=63  Identities=13%  Similarity=0.112  Sum_probs=47.6

Q ss_pred             CccEEEEEecCCeEEEEeCCCCCCCceEEecC---CCCCEEEEEEccCCCEEEEEeCCCcEEEEECC
Q psy7062          24 LVEMVAALGGYQHIRMYDFGSNNPNPVINCEG---VSKNVVEVGFQEDGKWMFTGGEDCRARIWDLS   87 (148)
Q Consensus        24 ~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~---~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~   87 (148)
                      +|++||. -.|..|.+-..+..-...+...+.   .......++||||+..++.+...|+|++||+.
T Consensus         8 ~Gk~lAi-~qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~   73 (282)
T PF15492_consen    8 DGKLLAI-LQDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLM   73 (282)
T ss_pred             CCcEEEE-EeccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEecc
Confidence            3888888 788888887776543333444332   23456789999999999999999999999996

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=97.21  E-value=0.039  Score=39.58  Aligned_cols=54  Identities=15%  Similarity=0.148  Sum_probs=37.2

Q ss_pred             EEEeCCCCccEEEEEecC------CeEEEEeCC-CCCCCceEEecCCCCCEEEEEEccCCCEEEEE
Q psy7062          17 TVFDSKHLVEMVAALGGY------QHIRMYDFG-SNNPNPVINCEGVSKNVVEVGFQEDGKWMFTG   75 (148)
Q Consensus        17 ~~~~~~~~~~~l~~~~~d------~~v~~~d~~-~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~   75 (148)
                      .+|+++  |++|++ ++.      |.|-+||.. +.  +.+..+..|.-..=.+.+.|||+.|+.+
T Consensus        56 g~fs~d--G~~Lyt-TEnd~~~g~G~IgVyd~~~~~--~ri~E~~s~GIGPHel~l~pDG~tLvVA  116 (305)
T PF07433_consen   56 GVFSPD--GRLLYT-TENDYETGRGVIGVYDAARGY--RRIGEFPSHGIGPHELLLMPDGETLVVA  116 (305)
T ss_pred             EEEcCC--CCEEEE-eccccCCCcEEEEEEECcCCc--EEEeEecCCCcChhhEEEcCCCCEEEEE
Confidence            356677  788888 433      479999999 44  6677777666555566677777666554

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=97.15  E-value=0.012  Score=46.14  Aligned_cols=95  Identities=9%  Similarity=0.163  Sum_probs=68.2

Q ss_pred             CccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEc--cCCCEEEEEeCCCcEEEEECCcc------------
Q psy7062          24 LVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQ--EDGKWMFTGGEDCRARIWDLSLC------------   89 (148)
Q Consensus        24 ~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~s--p~~~~l~~~~~~~~i~l~d~~~~------------   89 (148)
                      .++..++-+....+.+||.+.+..+....+ .....|..++|.  |+++.+++.+..+.|.++--...            
T Consensus        40 ~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f-~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i  118 (631)
T PF12234_consen   40 IKKIAVVDSSRSELTIWDTRSGVLEYEESF-SEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGPSWAPI  118 (631)
T ss_pred             cCcEEEEECCCCEEEEEEcCCcEEEEeeee-cCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCccccee
Confidence            356656644455899999998722222233 347789999995  68999999999999998865322            


Q ss_pred             -------cc-ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          90 -------FI-QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        90 -------~~-~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                             ++ .+|....|.++|..++.++.        ++.++|-.
T Consensus       119 ~~i~i~~~T~h~Igds~Wl~~G~LvV~sGN--------qlfv~dk~  156 (631)
T PF12234_consen  119 RKIDISSHTPHPIGDSIWLKDGTLVVGSGN--------QLFVFDKW  156 (631)
T ss_pred             EEEEeecCCCCCccceeEecCCeEEEEeCC--------EEEEECCC
Confidence                   11 78889999999998777655        68887743

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=97.14  E-value=0.0023  Score=45.68  Aligned_cols=103  Identities=13%  Similarity=0.299  Sum_probs=71.0

Q ss_pred             EeCCCCccEEEEEecCCeEEEEeCCCCCCC----------------------------------------ceEEe-cCCC
Q psy7062          19 FDSKHLVEMVAALGGYQHIRMYDFGSNNPN----------------------------------------PVINC-EGVS   57 (148)
Q Consensus        19 ~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~----------------------------------------~~~~~-~~~~   57 (148)
                      +++.....+|++ +.|.++++|.+..++.+                                        +.+.. ..|+
T Consensus        94 ~~~t~r~hFLls-tNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~  172 (460)
T COG5170          94 FDDTGRNHFLLS-TNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHP  172 (460)
T ss_pred             ecCCCcceEEEe-cCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccce
Confidence            345555667777 89999999998654200                                        01111 3467


Q ss_pred             CCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---cc-------------ccceEEEEccC-CCEEEEEecCCceecCee
Q psy7062          58 KNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---FI-------------QQVNALRITPD-KQLLASAEELSCCYCGAA  120 (148)
Q Consensus        58 ~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---~~-------------~~i~~~~~sp~-~~~l~~~~~d~~~~~~~~  120 (148)
                      ..+.+++++.|...+++++ |=.|.+|++...   |.             .-|.+..|+|. ...+...+..|      .
T Consensus       173 yhiNSiS~NsD~et~lSaD-dLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG------~  245 (460)
T COG5170         173 YHINSISFNSDKETLLSAD-DLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKG------E  245 (460)
T ss_pred             eEeeeeeecCchheeeecc-ceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCC------c
Confidence            7889999999999888875 557889988654   11             55788899994 45555666545      8


Q ss_pred             EEEeecCCC
Q psy7062         121 VFVYNSCYP  129 (148)
Q Consensus       121 i~~~d~~~~  129 (148)
                      |++-|++..
T Consensus       246 Ikl~DlRq~  254 (460)
T COG5170         246 IKLNDLRQS  254 (460)
T ss_pred             EEehhhhhh
Confidence            999998843

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=97.11  E-value=0.015  Score=43.87  Aligned_cols=89  Identities=15%  Similarity=0.216  Sum_probs=60.1

Q ss_pred             eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEE-EEeCCC--cEEEEECCcc----cc---ccceEEEEccCCCE
Q psy7062          36 HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMF-TGGEDC--RARIWDLSLC----FI---QQVNALRITPDKQL  105 (148)
Q Consensus        36 ~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~-~~~~~~--~i~l~d~~~~----~~---~~i~~~~~sp~~~~  105 (148)
                      .+.++|++++....+..+.++..   .-+|+|||+.++ +...|+  .|.+.|+...    +.   +.-..=.|+|||++
T Consensus       219 ~i~~~~l~~g~~~~i~~~~g~~~---~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~~Lt~~~gi~~~Ps~spdG~~  295 (425)
T COG0823         219 RIYYLDLNTGKRPVILNFNGNNG---APAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLPRLTNGFGINTSPSWSPDGSK  295 (425)
T ss_pred             eEEEEeccCCccceeeccCCccC---CccCCCCCCEEEEEECCCCCccEEEEcCCCCcceecccCCccccCccCCCCCCE
Confidence            58888999885455555554433   458999999764 455565  4667788766    33   33335679999998


Q ss_pred             EEEEecCCceecCeeEEEeecCCCc
Q psy7062         106 LASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus       106 l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                      ++-.+..+   +...|.++|....+
T Consensus       296 ivf~Sdr~---G~p~I~~~~~~g~~  317 (425)
T COG0823         296 IVFTSDRG---GRPQIYLYDLEGSQ  317 (425)
T ss_pred             EEEEeCCC---CCcceEEECCCCCc
Confidence            88887544   34578888877544

>KOG3617|consensus

Probab=97.00  E-value=0.0018  Score=51.79  Aligned_cols=101  Identities=8%  Similarity=0.107  Sum_probs=73.8

Q ss_pred             EEEEEeCCCCccEEEEEe----cCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-
Q psy7062          15 ISTVFDSKHLVEMVAALG----GYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~----~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-   89 (148)
                      ....|+|.  ..++++++    ..|+|-+| .+++  ++.+... .+-.+++++|+|..-.++.|=.-|.+.+|..++. 
T Consensus        19 ti~SWHPs--ePlfAVA~fS~er~GSVtIf-adtG--EPqr~Vt-~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e   92 (1416)
T KOG3617|consen   19 TISSWHPS--EPLFAVASFSPERGGSVTIF-ADTG--EPQRDVT-YPVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTE   92 (1416)
T ss_pred             cccccCCC--CceeEEEEecCCCCceEEEE-ecCC--CCCcccc-cceehhhhccChHHHHHhhccccceeEEEecCCce
Confidence            45566666  56777665    34577775 3444  4444332 3445678999998888888877899999999876 


Q ss_pred             -----cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          90 -----FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        90 -----~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                           ..  .++..+.|||+|..++++..-|      .+.+|.+.
T Consensus        93 ~htv~~th~a~i~~l~wS~~G~~l~t~d~~g------~v~lwr~d  131 (1416)
T KOG3617|consen   93 THTVVETHPAPIQGLDWSHDGTVLMTLDNPG------SVHLWRYD  131 (1416)
T ss_pred             eeeeccCCCCCceeEEecCCCCeEEEcCCCc------eeEEEEee
Confidence                 12  8899999999999999998755      78888765

>KOG0882|consensus

Probab=96.99  E-value=0.013  Score=43.78  Aligned_cols=99  Identities=10%  Similarity=-0.035  Sum_probs=78.4

Q ss_pred             ecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--------------------cc
Q psy7062          32 GGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--------------------FI   91 (148)
Q Consensus        32 ~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--------------------~~   91 (148)
                      -.++.+.++|-....-+....-..|.++|..+.+++.+..+++....|.|.-|.....                    +.
T Consensus       119 ~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~  198 (558)
T KOG0882|consen  119 FKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFP  198 (558)
T ss_pred             ccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhccc
Confidence            3556799998876522334444569999999999999999999999999999998731                    11


Q ss_pred             ---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062          92 ---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN  136 (148)
Q Consensus        92 ---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~  136 (148)
                         ....++.|+|++..+.+-+.|.      +|++++..+...++.++
T Consensus       199 K~Kt~pts~Efsp~g~qistl~~Dr------kVR~F~~KtGklvqeiD  240 (558)
T KOG0882|consen  199 KAKTEPTSFEFSPDGAQISTLNPDR------KVRGFVFKTGKLVQEID  240 (558)
T ss_pred             ccccCccceEEccccCcccccCccc------EEEEEEeccchhhhhhh
Confidence               6788999999999999999888      89999988776655443

>smart00320 WD40 WD40 repeats

Probab=96.93  E-value=0.0024  Score=29.41  Aligned_cols=28  Identities=25%  Similarity=0.465  Sum_probs=24.7

Q ss_pred             ccceEEEEccCCCEEEEEecCCceecCeeEEEee
Q psy7062          92 QQVNALRITPDKQLLASAEELSCCYCGAAVFVYN  125 (148)
Q Consensus        92 ~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d  125 (148)
                      ..+.++.|+++++.+++++.|+      .+++||
T Consensus        13 ~~i~~~~~~~~~~~~~~~~~d~------~~~~~~   40 (40)
T smart00320       13 GPVTSVAFSPDGKYLASASDDG------TIKLWD   40 (40)
T ss_pred             CceeEEEECCCCCEEEEecCCC------eEEEcC
Confidence            4688999999989999999988      899986

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=96.92  E-value=0.0061  Score=31.16  Aligned_cols=31  Identities=16%  Similarity=0.217  Sum_probs=27.4

Q ss_pred             CCCEEEEEEccCCCEEEEEeCCCcEEEEECC
Q psy7062          57 SKNVVEVGFQEDGKWMFTGGEDCRARIWDLS   87 (148)
Q Consensus        57 ~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~   87 (148)
                      ...|..++|||....++.++.+|.+.++.++
T Consensus        11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~   41 (47)
T PF12894_consen   11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRLN   41 (47)
T ss_pred             CCcEEEEEECCCCCEEEEEECCCeEEEEECC
Confidence            4568899999999999999999999999873

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=96.90  E-value=0.055  Score=44.77  Aligned_cols=106  Identities=14%  Similarity=0.109  Sum_probs=73.2

Q ss_pred             cEEEEEeCCCCccEEEEEecCC--eEEEEeCCCCC-CCceEEec-----CCCCCEEEEEEccCCCEEEEEeCCCcEEEE-
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQ--HIRMYDFGSNN-PNPVINCE-----GVSKNVVEVGFQEDGKWMFTGGEDCRARIW-   84 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~--~v~~~d~~~~~-~~~~~~~~-----~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~-   84 (148)
                      ....+|+...+..+++.+....  .+.+-...... .+.+..+.     .....|.++.+.++...++.+..+|.|.+. 
T Consensus        24 ~~~~~~d~~sd~i~~~~~~~~~~~~i~~~~~~~~~~~~~l~s~~~~~~~~~~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~  103 (928)
T PF04762_consen   24 ITATAFDSDSDSIYFVLGPNEIDYVIELDRFSQDGSVEVLASWDAPLPDDPNDKIVSFQYLADSESLCIALASGDIILVR  103 (928)
T ss_pred             cceEEEecCCCeEEEEECCCCcceEEEEEeeccCCceeEEEeccccCCcCCCCcEEEEEeccCCCcEEEEECCceEEEEE
Confidence            4667888877666667654444  23443332220 12233332     234679999999999999999999999998 


Q ss_pred             ---ECCcc-------ccccceEEEEccCCCEEEEEecCCceecCeeEEEee
Q psy7062          85 ---DLSLC-------FIQQVNALRITPDKQLLASAEELSCCYCGAAVFVYN  125 (148)
Q Consensus        85 ---d~~~~-------~~~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d  125 (148)
                         |....       +...|.+++||||+..|+.++.++      ++.+.+
T Consensus       104 ~~~~~~~~~~E~VG~vd~GI~a~~WSPD~Ella~vT~~~------~l~~mt  148 (928)
T PF04762_consen  104 EDPDPDEDEIEIVGSVDSGILAASWSPDEELLALVTGEG------NLLLMT  148 (928)
T ss_pred             ccCCCCCceeEEEEEEcCcEEEEEECCCcCEEEEEeCCC------EEEEEe
Confidence               55554       228899999999999999998877      565554

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=96.73  E-value=0.01  Score=44.80  Aligned_cols=98  Identities=12%  Similarity=0.166  Sum_probs=72.0

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCC---------------
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDC---------------   79 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~---------------   79 (148)
                      ....|+|.  |.+|++ ..-..|.+|+-...  ..+.++.  ...|..+.|+|++++|.+=+..+               
T Consensus        36 ~~~~~SP~--G~~l~~-~~~~~V~~~~g~~~--~~l~~~~--~~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~n  108 (561)
T COG5354          36 AYVSESPL--GTYLFS-EHAAGVECWGGPSK--AKLVRFR--HPDVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSKN  108 (561)
T ss_pred             hheeecCc--chheeh-hhccceEEccccch--hheeeee--cCCceecccCcccceeeeeccCCccChhhccCCccccC
Confidence            34566777  889888 66678999999988  5666665  55688999999999998855433               


Q ss_pred             cEEEEECCcc-----cc---cc--ce-EEEEccCCCEEEEEecCCceecCeeEEEeec
Q psy7062          80 RARIWDLSLC-----FI---QQ--VN-ALRITPDKQLLASAEELSCCYCGAAVFVYNS  126 (148)
Q Consensus        80 ~i~l~d~~~~-----~~---~~--i~-~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~  126 (148)
                      .+.+||+.++     |.   .+  .+ -+.|+-+..+++-...+       .++++++
T Consensus       109 ~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARvv~~-------sl~i~e~  159 (561)
T COG5354         109 NVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARVVGS-------SLYIHEI  159 (561)
T ss_pred             ceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhhccC-------eEEEEec
Confidence            4999999988     22   33  55 67888887776655432       4788885

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=96.65  E-value=0.078  Score=38.10  Aligned_cols=93  Identities=16%  Similarity=0.142  Sum_probs=62.3

Q ss_pred             EEEEeCCCCccEEEEEecCC-eEEEEeCCCCCCCceEEecCCCCC--EEEEEEccCCCEEEEEeC-----CCcEEEEECC
Q psy7062          16 STVFDSKHLVEMVAALGGYQ-HIRMYDFGSNNPNPVINCEGVSKN--VVEVGFQEDGKWMFTGGE-----DCRARIWDLS   87 (148)
Q Consensus        16 ~~~~~~~~~~~~l~~~~~d~-~v~~~d~~~~~~~~~~~~~~~~~~--i~~~~~sp~~~~l~~~~~-----~~~i~l~d~~   87 (148)
                      .++.+|.. ...++.+-.-| ...+||..++  +....+.....+  .-.-.||+||++|++.-.     .|.|-+||..
T Consensus         9 ~~a~~p~~-~~avafaRRPG~~~~v~D~~~g--~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~   85 (305)
T PF07433_consen    9 GVAAHPTR-PEAVAFARRPGTFALVFDCRTG--QLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAA   85 (305)
T ss_pred             ceeeCCCC-CeEEEEEeCCCcEEEEEEcCCC--ceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECc
Confidence            34445532 45555555544 4777899888  555555433322  223578999999988644     3789999999


Q ss_pred             cc------cc---ccceEEEEccCCCEEEEEec
Q psy7062          88 LC------FI---QQVNALRITPDKQLLASAEE  111 (148)
Q Consensus        88 ~~------~~---~~i~~~~~sp~~~~l~~~~~  111 (148)
                      ..      |.   -....+.+.||++.|+.+..
T Consensus        86 ~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANG  118 (305)
T PF07433_consen   86 RGYRRIGEFPSHGIGPHELLLMPDGETLVVANG  118 (305)
T ss_pred             CCcEEEeEecCCCcChhhEEEcCCCCEEEEEcC
Confidence            54      33   55678899999988888753

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=96.64  E-value=0.056  Score=43.69  Aligned_cols=90  Identities=12%  Similarity=0.111  Sum_probs=60.7

Q ss_pred             EEEecCCeEEEEeCCCCCCCceE-Eec--CCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc---ccceEE
Q psy7062          29 AALGGYQHIRMYDFGSNNPNPVI-NCE--GVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI---QQVNAL   97 (148)
Q Consensus        29 ~~~~~d~~v~~~d~~~~~~~~~~-~~~--~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~---~~i~~~   97 (148)
                      ..|-++..+..||.+-...+.+. ...  .......+++-..+| +++.|+.+|.|||||-...     |.   .+|.++
T Consensus       546 flGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~i  624 (794)
T PF08553_consen  546 FLGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKNNFSCFATTEDG-YIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGI  624 (794)
T ss_pred             EEEECCCceEEeccCCCCCceeeccccccccCCCceEEEecCCc-eEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEE
Confidence            34466788999999875222221 111  123445666555544 5888999999999995322     43   899999


Q ss_pred             EEccCCCEEEEEecCCceecCeeEEEeec
Q psy7062          98 RITPDKQLLASAEELSCCYCGAAVFVYNS  126 (148)
Q Consensus        98 ~~sp~~~~l~~~~~d~~~~~~~~i~~~d~  126 (148)
                      ..+.||++++.++..       .+.+++.
T Consensus       625 Dvt~DGkwilaTc~t-------yLlLi~t  646 (794)
T PF08553_consen  625 DVTADGKWILATCKT-------YLLLIDT  646 (794)
T ss_pred             EecCCCcEEEEeecc-------eEEEEEE
Confidence            999999999888752       3666664

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=96.60  E-value=0.012  Score=47.37  Aligned_cols=59  Identities=19%  Similarity=0.332  Sum_probs=45.2

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEEC
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL   86 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~   86 (148)
                      ...+|+|+.+|.||+||--..  +....+.+-...|.+|+++.||+|++..+... +.|++.
T Consensus       588 ~G~iavgs~~G~IRLyd~~g~--~AKT~lp~lG~pI~~iDvt~DGkwilaTc~ty-LlLi~t  646 (794)
T PF08553_consen  588 DGYIAVGSNKGDIRLYDRLGK--RAKTALPGLGDPIIGIDVTADGKWILATCKTY-LLLIDT  646 (794)
T ss_pred             CceEEEEeCCCcEEeecccch--hhhhcCCCCCCCeeEEEecCCCcEEEEeecce-EEEEEE
Confidence            456788899999999995443  55566777789999999999999988776553 444443

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>KOG1920|consensus

Probab=96.60  E-value=0.034  Score=46.18  Aligned_cols=106  Identities=17%  Similarity=0.156  Sum_probs=67.4

Q ss_pred             EEEEEeCCCCccEEEE-----EecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEe---CCCcEEEEEC
Q psy7062          15 ISTVFDSKHLVEMVAA-----LGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGG---EDCRARIWDL   86 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~-----~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~---~~~~i~l~d~   86 (148)
                      ..+.|-  ++|+++|+     ....+.+++||-+ +  ..-.+-......-.+++|-|.|.++++--   .++.|.+|.-
T Consensus       199 ~~IsWR--gDg~~fAVs~~~~~~~~RkirV~drE-g--~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffEr  273 (1265)
T KOG1920|consen  199 TSISWR--GDGEYFAVSFVESETGTRKIRVYDRE-G--ALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFER  273 (1265)
T ss_pred             ceEEEc--cCCcEEEEEEEeccCCceeEEEeccc-c--hhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEec
Confidence            334444  44999988     3333689999998 3  11111111122335789999999887743   3457888876


Q ss_pred             Ccc----c----c---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062          87 SLC----F----I---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        87 ~~~----~----~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                      +..    |    .   ..+..++|+.++..|++.....   ....|++|-..+
T Consensus       274 NGL~hg~f~l~~p~de~~ve~L~Wns~sdiLAv~~~~~---e~~~v~lwt~~N  323 (1265)
T KOG1920|consen  274 NGLRHGEFVLPFPLDEKEVEELAWNSNSDILAVVTSNL---ENSLVQLWTTGN  323 (1265)
T ss_pred             CCccccccccCCcccccchheeeecCCCCceeeeeccc---ccceEEEEEecC
Confidence            543    2    1   4489999999999988844332   233588887553

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=96.55  E-value=0.076  Score=32.31  Aligned_cols=87  Identities=13%  Similarity=0.023  Sum_probs=58.5

Q ss_pred             eCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---cc--ccc
Q psy7062          20 DSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---FI--QQV   94 (148)
Q Consensus        20 ~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---~~--~~i   94 (148)
                      +-+...+ |++|++|..|++|+-+    +.+..+. .+..|+.+.-... ..++.+..+|+|-+|+-...   .+  ..+
T Consensus        11 d~dg~~e-LlvGs~D~~IRvf~~~----e~~~Ei~-e~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~~RlWRiKSK~~~   83 (111)
T PF14783_consen   11 DGDGENE-LLVGSDDFEIRVFKGD----EIVAEIT-ETDKVTSLCSLGG-GRFAYALANGTVGVYDRSQRLWRIKSKNQV   83 (111)
T ss_pred             CCCCcce-EEEecCCcEEEEEeCC----cEEEEEe-cccceEEEEEcCC-CEEEEEecCCEEEEEeCcceeeeeccCCCe
Confidence            3444344 5555999999999876    4577776 4667777766665 55778888888888877665   22  556


Q ss_pred             eEEEEcc-C--C-CEEEEEecCC
Q psy7062          95 NALRITP-D--K-QLLASAEELS  113 (148)
Q Consensus        95 ~~~~~sp-~--~-~~l~~~~~d~  113 (148)
                      .++.+.. +  | ..|++|=.+|
T Consensus        84 ~~~~~~D~~gdG~~eLI~GwsnG  106 (111)
T PF14783_consen   84 TSMAFYDINGDGVPELIVGWSNG  106 (111)
T ss_pred             EEEEEEcCCCCCceEEEEEecCC
Confidence            6665543 3  3 3677777666

>KOG2066|consensus

Probab=96.55  E-value=0.017  Score=45.94  Aligned_cols=79  Identities=15%  Similarity=0.166  Sum_probs=61.3

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-------ccccceEE
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-------FIQQVNAL   97 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-------~~~~i~~~   97 (148)
                      ...|+-|+.+|.+.+++....   + .+...|...      .-+|.++++|+.||++.+..+-+.       |..++.++
T Consensus        49 ~~~~~~GtH~g~v~~~~~~~~---~-~~~~~~s~~------~~~Gey~asCS~DGkv~I~sl~~~~~~~~~df~rpiksi  118 (846)
T KOG2066|consen   49 DKFFALGTHRGAVYLTTCQGN---P-KTNFDHSSS------ILEGEYVASCSDDGKVVIGSLFTDDEITQYDFKRPIKSI  118 (846)
T ss_pred             cceeeeccccceEEEEecCCc---c-ccccccccc------ccCCceEEEecCCCcEEEeeccCCccceeEecCCcceeE
Confidence            567888889999999998754   3 444445444      668999999999999999888766       44889999


Q ss_pred             EEccC-----CCEEEEEecCC
Q psy7062          98 RITPD-----KQLLASAEELS  113 (148)
Q Consensus        98 ~~sp~-----~~~l~~~~~d~  113 (148)
                      +++|+     .+.+++|+..|
T Consensus       119 al~Pd~~~~~sk~fv~GG~ag  139 (846)
T KOG2066|consen  119 ALHPDFSRQQSKQFVSGGMAG  139 (846)
T ss_pred             EeccchhhhhhhheeecCcce
Confidence            99997     45778877644

>KOG3617|consensus

Probab=96.52  E-value=0.0039  Score=50.03  Aligned_cols=69  Identities=10%  Similarity=0.108  Sum_probs=58.1

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECC
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLS   87 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~   87 (148)
                      ..++|+|.  .-+|+.|=+.+.+.+|...+.  +.-.....|+..|..+.||++|..++++..-|.+.+|...
T Consensus        63 tSLCWHpe--~~vLa~gwe~g~~~v~~~~~~--e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d  131 (1416)
T KOG3617|consen   63 TSLCWHPE--EFVLAQGWEMGVSDVQKTNTT--ETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD  131 (1416)
T ss_pred             hhhccChH--HHHHhhccccceeEEEecCCc--eeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence            35677776  667888777889999999887  5555566799999999999999999999999999999775

>KOG2114|consensus

Probab=96.51  E-value=0.057  Score=43.44  Aligned_cols=100  Identities=15%  Similarity=0.211  Sum_probs=71.4

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCC-EEEEEEccCCCEEEEEeCCC-----cEEEEECCc
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKN-VVEVGFQEDGKWMFTGGEDC-----RARIWDLSL   88 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~-i~~~~~sp~~~~l~~~~~~~-----~i~l~d~~~   88 (148)
                      ...+|++.  +..+|.|+.+|.|.+.+-.-   +.+..++.+... +..+-.-.+.+++++.+.|.     .+++||+..
T Consensus        27 ~isc~~s~--~~~vvigt~~G~V~~Ln~s~---~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek  101 (933)
T KOG2114|consen   27 AISCCSSS--TGSVVIGTADGRVVILNSSF---QLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEK  101 (933)
T ss_pred             ceeEEcCC--CceEEEeeccccEEEecccc---eeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccc
Confidence            44555665  88889989999988877654   355778887777 44444444446888877764     489999954


Q ss_pred             c--------c------c-------ccceEEEEccCCCEEEEEecCCceecCeeEEEee
Q psy7062          89 C--------F------I-------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYN  125 (148)
Q Consensus        89 ~--------~------~-------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d  125 (148)
                      .        +      .       .++.+++.+.+-+.+++|..+|      .|..+.
T Consensus       102 ~~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG------~V~~~~  153 (933)
T KOG2114|consen  102 VDKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNG------LVICYK  153 (933)
T ss_pred             cCCCCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCc------EEEEEc
Confidence            3        1      1       6778889999989999999988      555553

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=96.46  E-value=0.16  Score=35.08  Aligned_cols=105  Identities=13%  Similarity=0.078  Sum_probs=66.2

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEc-cCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQ-EDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~s-p~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ++.+|++.. +.++++-...+.|..|+..++  . ...+....  ..++.+. +++++++ +...+ +.++|..++    
T Consensus         3 Egp~~d~~~-g~l~~~D~~~~~i~~~~~~~~--~-~~~~~~~~--~~G~~~~~~~g~l~v-~~~~~-~~~~d~~~g~~~~   74 (246)
T PF08450_consen    3 EGPVWDPRD-GRLYWVDIPGGRIYRVDPDTG--E-VEVIDLPG--PNGMAFDRPDGRLYV-ADSGG-IAVVDPDTGKVTV   74 (246)
T ss_dssp             EEEEEETTT-TEEEEEETTTTEEEEEETTTT--E-EEEEESSS--EEEEEEECTTSEEEE-EETTC-EEEEETTTTEEEE
T ss_pred             cceEEECCC-CEEEEEEcCCCEEEEEECCCC--e-EEEEecCC--CceEEEEccCCEEEE-EEcCc-eEEEecCCCcEEE
Confidence            678899842 778888567889999999887  3 33333222  7788888 5655544 44444 455598776    


Q ss_pred             ---c-----c-ccceEEEEccCCCEEEEEecCCceecC--eeEEEeecC
Q psy7062          90 ---F-----I-QQVNALRITPDKQLLASAEELSCCYCG--AAVFVYNSC  127 (148)
Q Consensus        90 ---~-----~-~~i~~~~~sp~~~~l~~~~~d~~~~~~--~~i~~~d~~  127 (148)
                         .     . ...+.+++.|+|+..++..........  +.|..++..
T Consensus        75 ~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~  123 (246)
T PF08450_consen   75 LADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD  123 (246)
T ss_dssp             EEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT
T ss_pred             EeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC
Confidence               1     1 567889999999977776543321111  457777766

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>KOG1008|consensus

Probab=96.46  E-value=0.0013  Score=50.94  Aligned_cols=107  Identities=21%  Similarity=0.269  Sum_probs=74.9

Q ss_pred             eecCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEE-CC
Q psy7062          10 TAFGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIWD-LS   87 (148)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d-~~   87 (148)
                      +..++..++|..+  ..++.+|.....++++|++..   ......-.+..+.++.+.| .+.++++-. |+.+-+|| .+
T Consensus       153 ~l~gqns~cwlrd--~klvlaGm~sr~~~ifdlRqs---~~~~~svnTk~vqG~tVdp~~~nY~cs~~-dg~iAiwD~~r  226 (783)
T KOG1008|consen  153 TLDGQNSVCWLRD--TKLVLAGMTSRSVHIFDLRQS---LDSVSSVNTKYVQGITVDPFSPNYFCSNS-DGDIAIWDTYR  226 (783)
T ss_pred             cccCccccccccC--cchhhcccccchhhhhhhhhh---hhhhhhhhhhhcccceecCCCCCceeccc-cCceeeccchh
Confidence            4456677888744  678888777779999999854   1222222356678888999 888887766 99999999 33


Q ss_pred             cc---cc----------ccceEEEEccCCC-EEEEEecCCceecCeeEEEeecC
Q psy7062          88 LC---FI----------QQVNALRITPDKQ-LLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        88 ~~---~~----------~~i~~~~~sp~~~-~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                      +.   |.          .+...++|.|... .+++..+|     ..+|+++|++
T Consensus       227 nienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~Rd-----S~tIrlydi~  275 (783)
T KOG1008|consen  227 NIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRD-----SITIRLYDIC  275 (783)
T ss_pred             hhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccC-----cceEEEeccc
Confidence            33   21          4588999999544 55555553     4479999976

>PRK02888 nitrous-oxide reductase; Validated

Probab=96.41  E-value=0.1  Score=41.04  Aligned_cols=88  Identities=14%  Similarity=0.125  Sum_probs=61.0

Q ss_pred             CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEe--------------------------------------
Q psy7062          35 QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGG--------------------------------------   76 (148)
Q Consensus        35 ~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~--------------------------------------   76 (148)
                      +.+.+.|.++.  +...++.. ....-.++++|+|+++.+.+                                      
T Consensus       215 ~~vSvID~etm--eV~~qV~V-dgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni~~iea~vkdGK~~  291 (635)
T PRK02888        215 SLFTAVDAETM--EVAWQVMV-DGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNIARIEEAVKAGKFK  291 (635)
T ss_pred             EEEEEEECccc--eEEEEEEe-CCCcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEchHHHHHhhhCCCEE
Confidence            45666677766  55555542 22344567777877776654                                      


Q ss_pred             --CCCcEEEEECCc-----c-----cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          77 --EDCRARIWDLSL-----C-----FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        77 --~~~~i~l~d~~~-----~-----~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                        .++++.+.|..+     .     +.  .+.+.+.++|||+++++++.     -..++.++|+.+..
T Consensus       292 ~V~gn~V~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVank-----lS~tVSVIDv~k~k  354 (635)
T PRK02888        292 TIGGSKVPVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIANGK-----LSPTVTVIDVRKLD  354 (635)
T ss_pred             EECCCEEEEEECCccccCCcceEEEEECCCCccceEECCCCCEEEEeCC-----CCCcEEEEEChhhh
Confidence              125588889887     2     22  77899999999999988876     23489999988654

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=96.39  E-value=0.27  Score=36.78  Aligned_cols=106  Identities=13%  Similarity=0.117  Sum_probs=65.1

Q ss_pred             EEEeCCCCccEEEEE-ecCC----eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCC-----------c
Q psy7062          17 TVFDSKHLVEMVAAL-GGYQ----HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDC-----------R   80 (148)
Q Consensus        17 ~~~~~~~~~~~l~~~-~~d~----~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~-----------~   80 (148)
                      ..++|+  +++++.+ +..|    .++++|++++  +.+...- ....-..+.|.++++.++....+.           .
T Consensus       129 ~~~Spd--g~~la~~~s~~G~e~~~l~v~Dl~tg--~~l~d~i-~~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~  203 (414)
T PF02897_consen  129 FSVSPD--GKRLAYSLSDGGSEWYTLRVFDLETG--KFLPDGI-ENPKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQ  203 (414)
T ss_dssp             EEETTT--SSEEEEEEEETTSSEEEEEEEETTTT--EEEEEEE-EEEESEEEEECTTSSEEEEEECSTTTSS-CCGCCEE
T ss_pred             eeECCC--CCEEEEEecCCCCceEEEEEEECCCC--cCcCCcc-cccccceEEEeCCCCEEEEEEeCcccccccCCCCcE
Confidence            334455  7777654 3333    5999999998  5554321 111123499999998776654332           3


Q ss_pred             EEEEECCcc-------cc---cc--ceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          81 ARIWDLSLC-------FI---QQ--VNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        81 i~l~d~~~~-------~~---~~--i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                      ++.|++.+.       |.   ..  ...+..++++++++.....+..  ...+.+.|....
T Consensus       204 v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~--~s~v~~~d~~~~  262 (414)
T PF02897_consen  204 VYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTS--ESEVYLLDLDDG  262 (414)
T ss_dssp             EEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSS--EEEEEEEECCCT
T ss_pred             EEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEcccc--CCeEEEEecccc
Confidence            778888765       33   22  4567889999988876654411  146888888764

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=96.36  E-value=0.18  Score=37.21  Aligned_cols=94  Identities=14%  Similarity=0.071  Sum_probs=60.2

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---cc----ccceEE
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---FI----QQVNAL   97 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---~~----~~i~~~   97 (148)
                      ++.+++++.++.+..+|..++  +.+.............  ..++..++.++.++.+..+|..++   ..    ..+.  
T Consensus        65 ~~~v~v~~~~g~v~a~d~~tG--~~~W~~~~~~~~~~~p--~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~--  138 (377)
T TIGR03300        65 GGKVYAADADGTVVALDAETG--KRLWRVDLDERLSGGV--GADGGLVFVGTEKGEVIALDAEDGKELWRAKLSSEVL--  138 (377)
T ss_pred             CCEEEEECCCCeEEEEEccCC--cEeeeecCCCCcccce--EEcCCEEEEEcCCCEEEEEECCCCcEeeeeccCceee--
Confidence            456677688899999999988  6666655332211122  225677788888999999999887   11    2111  


Q ss_pred             EEcc--CCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          98 RITP--DKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        98 ~~sp--~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                       -+|  .+..++.++.++      .++.||..+.+.
T Consensus       139 -~~p~v~~~~v~v~~~~g------~l~a~d~~tG~~  167 (377)
T TIGR03300       139 -SPPLVANGLVVVRTNDG------RLTALDAATGER  167 (377)
T ss_pred             -cCCEEECCEEEEECCCC------eEEEEEcCCCce
Confidence             112  344566666666      788888776554

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>KOG1008|consensus

Probab=96.36  E-value=0.0013  Score=50.87  Aligned_cols=110  Identities=14%  Similarity=0.163  Sum_probs=80.3

Q ss_pred             cCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEcc-CCCEEEEEe----CCCcEEEEEC
Q psy7062          12 FGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQE-DGKWMFTGG----EDCRARIWDL   86 (148)
Q Consensus        12 ~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~----~~~~i~l~d~   86 (148)
                      +...|+++....+.-++++|..+|.|-+-.++...-..-....+|....++++|++ |.++|+.|-    .|..+.+||+
T Consensus        57 qy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi  136 (783)
T KOG1008|consen   57 QYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDI  136 (783)
T ss_pred             CCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccceec
Confidence            34567777665556789999999999999888762222334456778899999998 667777763    3457999999


Q ss_pred             Ccc---------cc----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          87 SLC---------FI----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        87 ~~~---------~~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                      .+.         |.    .....++|-.+.+.+++|...+      .+.++|++
T Consensus       137 ~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr------~~~ifdlR  184 (783)
T KOG1008|consen  137 NSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSR------SVHIFDLR  184 (783)
T ss_pred             ccccCCCccccccccccccCccccccccCcchhhcccccc------hhhhhhhh
Confidence            887         21    3455788887888888887744      78888887

>KOG4190|consensus

Probab=96.31  E-value=0.0035  Score=48.04  Aligned_cols=70  Identities=11%  Similarity=0.358  Sum_probs=54.9

Q ss_pred             eEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----------cc-----ccceEEEEccCCCEEEEEecCCc
Q psy7062          50 VINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----------FI-----QQVNALRITPDKQLLASAEELSC  114 (148)
Q Consensus        50 ~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----------~~-----~~i~~~~~sp~~~~l~~~~~d~~  114 (148)
                      +..+.+|+..|..+.--.+.+-+++++.|.++++|.++..          |.     .+|..+.|-.+-++++++..   
T Consensus       728 L~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~ScD~---  804 (1034)
T KOG4190|consen  728 LCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASCDG---  804 (1034)
T ss_pred             eecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeeccC---
Confidence            3456778887777766566778899999999999999865          22     77888888888888877643   


Q ss_pred             eecCeeEEEeecC
Q psy7062         115 CYCGAAVFVYNSC  127 (148)
Q Consensus       115 ~~~~~~i~~~d~~  127 (148)
                           -|.+||.-
T Consensus       805 -----giHlWDPF  812 (1034)
T KOG4190|consen  805 -----GIHLWDPF  812 (1034)
T ss_pred             -----cceeeccc
Confidence                 69999955

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=96.11  E-value=0.25  Score=33.70  Aligned_cols=50  Identities=12%  Similarity=0.222  Sum_probs=36.8

Q ss_pred             cEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEe
Q psy7062          26 EMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGG   76 (148)
Q Consensus        26 ~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~   76 (148)
                      +.|..+.....|.+|++....-+.+.+|.. -+.|..+.++..|.++++--
T Consensus        29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~T-v~~V~~l~y~~~GDYlvTlE   78 (215)
T PF14761_consen   29 DALFVAASGCKVEVYDLEQEECPLLCTFST-VGRVLQLVYSEAGDYLVTLE   78 (215)
T ss_pred             ceEEEEcCCCEEEEEEcccCCCceeEEEcc-hhheeEEEeccccceEEEEE
Confidence            344333666789999998443356677764 47889999999999999853

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=96.11  E-value=0.1  Score=40.54  Aligned_cols=108  Identities=9%  Similarity=0.067  Sum_probs=67.5

Q ss_pred             cEEEEEeCCC---CccEEEEEecCCeEEEEeCCCCCCCc---eE--EecC---CCCCEEEEEEccCCCEEEEEeCCCcEE
Q psy7062          14 QISTVFDSKH---LVEMVAALGGYQHIRMYDFGSNNPNP---VI--NCEG---VSKNVVEVGFQEDGKWMFTGGEDCRAR   82 (148)
Q Consensus        14 ~~~~~~~~~~---~~~~l~~~~~d~~v~~~d~~~~~~~~---~~--~~~~---~~~~i~~~~~sp~~~~l~~~~~~~~i~   82 (148)
                      ...+.|.|..   .-.+||+ ....-|-+|.+.....+.   +.  +.+.   ..--..+.-|+|....++.-.....-.
T Consensus        59 V~GlsW~P~~~~~~paLLAV-QHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV  137 (671)
T PF15390_consen   59 VHGLSWAPPCTADTPALLAV-QHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSV  137 (671)
T ss_pred             eeeeeecCcccCCCCceEEE-eccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeE
Confidence            3567776532   2356777 777889999987321111   11  1110   011235678999888776666555556


Q ss_pred             EEECCcc-------cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          83 IWDLSLC-------FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        83 l~d~~~~-------~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                      +++.+..       +.  +.|.|.+|.+||+.|+++-..     .-.-++||-.
T Consensus       138 ~~sV~~d~srVkaDi~~~G~IhCACWT~DG~RLVVAvGS-----sLHSyiWd~~  186 (671)
T PF15390_consen  138 LPSVHCDSSRVKADIKTSGLIHCACWTKDGQRLVVAVGS-----SLHSYIWDSA  186 (671)
T ss_pred             eeeeeeCCceEEEeccCCceEEEEEecCcCCEEEEEeCC-----eEEEEEecCc
Confidence            6666543       22  889999999999988887541     2356799854

>KOG2079|consensus

Probab=96.11  E-value=0.028  Score=46.23  Aligned_cols=88  Identities=22%  Similarity=0.312  Sum_probs=62.9

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc------cc
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI------QQ   93 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~------~~   93 (148)
                      +..++.|++.|.+..+|.... ..+..+-..-..+|++++++.+|+.++.|-.+|.|.+||....     +.      ..
T Consensus        99 ~~~ivi~Ts~ghvl~~d~~~n-L~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~  177 (1206)
T KOG2079|consen   99 VVPIVIGTSHGHVLLSDMTGN-LGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTG  177 (1206)
T ss_pred             eeeEEEEcCchhhhhhhhhcc-cchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccce
Confidence            445677677788888888763 1222222224578999999999999999999999999999885     22      33


Q ss_pred             ceEEEEccCCCEEEEEecCC
Q psy7062          94 VNALRITPDKQLLASAEELS  113 (148)
Q Consensus        94 i~~~~~sp~~~~l~~~~~d~  113 (148)
                      +.-+.+..++..++++...|
T Consensus       178 vi~v~~t~~nS~llt~D~~G  197 (1206)
T KOG2079|consen  178 VIFVGRTSQNSKLLTSDTGG  197 (1206)
T ss_pred             EEEEEEeCCCcEEEEccCCC
Confidence            44455556667777777655

>KOG2395|consensus

Probab=96.02  E-value=0.045  Score=41.92  Aligned_cols=59  Identities=19%  Similarity=0.277  Sum_probs=45.7

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEEC
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL   86 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~   86 (148)
                      ..++|+||.+|.||+||--..  +....+++-...|..+..+.+|++++..+.. .+.+-+.
T Consensus       441 sG~IvvgS~~GdIRLYdri~~--~AKTAlPgLG~~I~hVdvtadGKwil~Tc~t-yLlLi~t  499 (644)
T KOG2395|consen  441 SGYIVVGSLKGDIRLYDRIGR--RAKTALPGLGDAIKHVDVTADGKWILATCKT-YLLLIDT  499 (644)
T ss_pred             CceEEEeecCCcEEeehhhhh--hhhhcccccCCceeeEEeeccCcEEEEeccc-EEEEEEE
Confidence            457788899999999998433  5556777888999999999999998776544 4555554

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=96.00  E-value=0.1  Score=39.48  Aligned_cols=109  Identities=10%  Similarity=0.037  Sum_probs=62.8

Q ss_pred             EEEEEeCCCCccEEEEEecCCe--EEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEE-eCCCc--EEEEECCcc
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQH--IRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTG-GEDCR--ARIWDLSLC   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~--v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~-~~~~~--i~l~d~~~~   89 (148)
                      ....|+|+. ..++.+...|+.  |.++|+.++  . +..+....+.-+.=.|+|||++++-. +..|.  |.+.|+...
T Consensus       241 ~~P~fspDG-~~l~f~~~rdg~~~iy~~dl~~~--~-~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~  316 (425)
T COG0823         241 GAPAFSPDG-SKLAFSSSRDGSPDIYLMDLDGK--N-LPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGS  316 (425)
T ss_pred             CCccCCCCC-CEEEEEECCCCCccEEEEcCCCC--c-ceecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCC
Confidence            455677774 333334345564  666677766  3 33343222323356899999977554 45554  555566554


Q ss_pred             ----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 ----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 ----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                          +.   ..-..-.|+|||++++..+..+   +...|.+.|+.+..
T Consensus       317 ~~~riT~~~~~~~~p~~SpdG~~i~~~~~~~---g~~~i~~~~~~~~~  361 (425)
T COG0823         317 QVTRLTFSGGGNSNPVWSPDGDKIVFESSSG---GQWDIDKNDLASGG  361 (425)
T ss_pred             ceeEeeccCCCCcCccCCCCCCEEEEEeccC---CceeeEEeccCCCC
Confidence                22   3333778999999998887432   12346666665443

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=95.95  E-value=0.3  Score=36.01  Aligned_cols=99  Identities=11%  Similarity=-0.005  Sum_probs=62.9

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--c-cc-cceE-EEE
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--F-IQ-QVNA-LRI   99 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--~-~~-~i~~-~~~   99 (148)
                      ++.++.++.++.+..+|.+++  +.+..... .. ....  ..++..++.++.++.+..+|..++  + +. .... ..-
T Consensus       241 ~~~vy~~~~~g~l~a~d~~tG--~~~W~~~~-~~-~~~p--~~~~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~~~s  314 (377)
T TIGR03300       241 GGQVYAVSYQGRVAALDLRSG--RVLWKRDA-SS-YQGP--AVDDNRLYVTDADGVVVALDRRSGSELWKNDELKYRQLT  314 (377)
T ss_pred             CCEEEEEEcCCEEEEEECCCC--cEEEeecc-CC-ccCc--eEeCCEEEEECCCCeEEEEECCCCcEEEccccccCCccc
Confidence            345566688899999999988  66655441 11 1111  234667777888999999999877  1 11 1100 111


Q ss_pred             cc--CCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062         100 TP--DKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus       100 sp--~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                      +|  .+..+++++.+|      .++++|..+.+.....
T Consensus       315 sp~i~g~~l~~~~~~G------~l~~~d~~tG~~~~~~  346 (377)
T TIGR03300       315 APAVVGGYLVVGDFEG------YLHWLSREDGSFVARL  346 (377)
T ss_pred             cCEEECCEEEEEeCCC------EEEEEECCCCCEEEEE
Confidence            12  466788888877      8999998777655433

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>KOG3621|consensus

Probab=95.95  E-value=0.028  Score=44.10  Aligned_cols=64  Identities=13%  Similarity=0.242  Sum_probs=50.0

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEe---c-CCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCc
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINC---E-GVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSL   88 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~---~-~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~   88 (148)
                      ..++|.|+..+.|.++.+.......+..+   . .|...|++++|++++..+++|+..|++.+-.+.+
T Consensus        88 e~lvAagt~~g~V~v~ql~~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s  155 (726)
T KOG3621|consen   88 EYLVAAGTASGRVSVFQLNKELPRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS  155 (726)
T ss_pred             hHhhhhhcCCceEEeehhhccCCCcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence            67788888888999998876422222222   1 2678999999999999999999999999888776

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=95.86  E-value=0.035  Score=28.33  Aligned_cols=29  Identities=28%  Similarity=0.417  Sum_probs=26.4

Q ss_pred             ccceEEEEccCCCEEEEEecCCceecCeeEEEeec
Q psy7062          92 QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNS  126 (148)
Q Consensus        92 ~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~  126 (148)
                      ..+..++|+|....++.++.+|      .|.++.+
T Consensus        12 ~~v~~~~w~P~mdLiA~~t~~g------~v~v~Rl   40 (47)
T PF12894_consen   12 SRVSCMSWCPTMDLIALGTEDG------EVLVYRL   40 (47)
T ss_pred             CcEEEEEECCCCCEEEEEECCC------eEEEEEC
Confidence            5688999999999999999988      8988887

>KOG2444|consensus

Probab=95.79  E-value=0.055  Score=37.06  Aligned_cols=97  Identities=11%  Similarity=0.097  Sum_probs=56.8

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceE-EecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--cc-------ccc
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVI-NCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--FI-------QQV   94 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~-~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--~~-------~~i   94 (148)
                      +.-++.|+.++.+.+|+..... .... ...+.....+.+..-.++.+.++++.++.++.|++...  +.       .++
T Consensus        70 ~~~~~vG~~dg~v~~~n~n~~g-~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~  148 (238)
T KOG2444|consen   70 SAKLMVGTSDGAVYVFNWNLEG-AHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESG  148 (238)
T ss_pred             CceEEeecccceEEEecCCccc-hHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCceeeeeccccCCCc
Confidence            4556777999999999887431 1111 11222333344444456678899999999999999766  11       222


Q ss_pred             eEEEEccCCCEEEEE--ecCCceecCeeEEEeecCC
Q psy7062          95 NALRITPDKQLLASA--EELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        95 ~~~~~sp~~~~l~~~--~~d~~~~~~~~i~~~d~~~  128 (148)
                      -.+..+..++++..+  +.|.      .+++|++..
T Consensus       149 e~~ivv~sd~~i~~a~~S~d~------~~k~W~ve~  178 (238)
T KOG2444|consen  149 EELIVVGSDEFLKIADTSHDR------VLKKWNVEK  178 (238)
T ss_pred             ceeEEecCCceEEeeccccch------hhhhcchhh
Confidence            333333344444444  4433      677777654

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=95.67  E-value=0.21  Score=34.05  Aligned_cols=101  Identities=10%  Similarity=0.008  Sum_probs=62.7

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc--c----c
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI--Q----Q   93 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~--~----~   93 (148)
                      +..+++++.++.+..||..++  +.+..... ...+...- ..++..++.++.++.+..+|..++     ..  .    .
T Consensus        36 ~~~v~~~~~~~~l~~~d~~tG--~~~W~~~~-~~~~~~~~-~~~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~  111 (238)
T PF13360_consen   36 GGRVYVASGDGNLYALDAKTG--KVLWRFDL-PGPISGAP-VVDGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAG  111 (238)
T ss_dssp             TTEEEEEETTSEEEEEETTTS--EEEEEEEC-SSCGGSGE-EEETTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCS
T ss_pred             CCEEEEEcCCCEEEEEECCCC--CEEEEeec-ccccccee-eecccccccccceeeeEecccCCcceeeeeccccccccc
Confidence            455666589999999999998  77666553 22111111 224555666667889999998888     11  1    1


Q ss_pred             -ceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          94 -VNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        94 -i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                       ........++..++.+..++      .|..+|..+.+.....
T Consensus       112 ~~~~~~~~~~~~~~~~~~~~g------~l~~~d~~tG~~~w~~  148 (238)
T PF13360_consen  112 VRSSSSPAVDGDRLYVGTSSG------KLVALDPKTGKLLWKY  148 (238)
T ss_dssp             TB--SEEEEETTEEEEEETCS------EEEEEETTTTEEEEEE
T ss_pred             cccccCceEecCEEEEEeccC------cEEEEecCCCcEEEEe
Confidence             11122223477777777655      7888998877765444

...

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=95.63  E-value=0.32  Score=37.05  Aligned_cols=44  Identities=18%  Similarity=0.129  Sum_probs=28.5

Q ss_pred             CCEEEEEeCCCcEEEEECCcc--c---c-ccceEEEEccCCCEEEEEecCC
Q psy7062          69 GKWMFTGGEDCRARIWDLSLC--F---I-QQVNALRITPDKQLLASAEELS  113 (148)
Q Consensus        69 ~~~l~~~~~~~~i~l~d~~~~--~---~-~~i~~~~~sp~~~~l~~~~~d~  113 (148)
                      |..+...+.+ .+.+||+.++  +   . .++..+.|++++.+++..+.+.
T Consensus       117 G~LL~~~~~~-~i~~yDw~~~~~i~~i~v~~vk~V~Ws~~g~~val~t~~~  166 (443)
T PF04053_consen  117 GNLLGVKSSD-FICFYDWETGKLIRRIDVSAVKYVIWSDDGELVALVTKDS  166 (443)
T ss_dssp             SSSEEEEETT-EEEEE-TTT--EEEEESS-E-EEEEE-TTSSEEEEE-S-S
T ss_pred             CcEEEEECCC-CEEEEEhhHcceeeEEecCCCcEEEEECCCCEEEEEeCCe
Confidence            6666555444 7999999987  2   2 4579999999999999988654

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>KOG0882|consensus

Probab=95.61  E-value=0.24  Score=37.40  Aligned_cols=101  Identities=12%  Similarity=0.040  Sum_probs=72.8

Q ss_pred             ccEEEEEecCCeEEEEeCCCCC----CCc---------eEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNN----PNP---------VINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--   89 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~----~~~---------~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--   89 (148)
                      ++..++....|.|..|..+..-    .+.         +..+.......+++.++|+|..+.+-+.|.++++++.+++  
T Consensus       156 ~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGkl  235 (558)
T KOG0882|consen  156 GDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKL  235 (558)
T ss_pred             ccceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCcccEEEEEEeccchh
Confidence            6667776667889999987310    011         1112223567789999999999999999999999999887  


Q ss_pred             -----------------------------------cc----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 -----------------------------------FI----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 -----------------------------------~~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                                                         +.    ..-..+.|...+++|+.++--|       |++.++.+.+
T Consensus       236 vqeiDE~~t~~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~~~~fdes~~flly~t~~g-------ikvin~~tn~  308 (558)
T KOG0882|consen  236 VQEIDEVLTDAQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGTNAVFDESGNFLLYGTILG-------IKVINLDTNT  308 (558)
T ss_pred             hhhhhccchhhhhccccccccceeehhhhhhHHhhHhhhcCcccceeEEcCCCCEEEeeccee-------EEEEEeecCe
Confidence                                               00    3445678888999999998755       7888877655


Q ss_pred             ce
Q psy7062         131 AV  132 (148)
Q Consensus       131 ~~  132 (148)
                      ..
T Consensus       309 v~  310 (558)
T KOG0882|consen  309 VV  310 (558)
T ss_pred             EE
Confidence            43

>KOG1920|consensus

Probab=95.41  E-value=0.94  Score=38.26  Aligned_cols=67  Identities=6%  Similarity=-0.048  Sum_probs=46.5

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEE
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIW   84 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~   84 (148)
                      ..+.++.....+-++.+...|.+.+-|.++.   .......-...|.+++||||+.+++..+..+++.+-
T Consensus        70 ~i~s~~fl~d~~~i~v~~~~G~iilvd~et~---~~eivg~vd~GI~aaswS~Dee~l~liT~~~tll~m  136 (1265)
T KOG1920|consen   70 EIVSVQFLADTNSICVITALGDIILVDPETL---ELEIVGNVDNGISAASWSPDEELLALITGRQTLLFM  136 (1265)
T ss_pred             ceEEEEEecccceEEEEecCCcEEEEccccc---ceeeeeeccCceEEEeecCCCcEEEEEeCCcEEEEE
Confidence            3344432222455555588899999888876   344444457789999999999999888877766544

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=95.31  E-value=0.081  Score=38.83  Aligned_cols=75  Identities=17%  Similarity=0.225  Sum_probs=52.4

Q ss_pred             CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----cc-------------------
Q psy7062          35 QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----FI-------------------   91 (148)
Q Consensus        35 ~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----~~-------------------   91 (148)
                      +...++|++++   .+..+......+....|||+|+.++... ++.|.+.+....    +.                   
T Consensus        23 ~~y~i~d~~~~---~~~~l~~~~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~lT~dg~~~i~nG~~dwvyeEE   98 (353)
T PF00930_consen   23 GDYYIYDIETG---EITPLTPPPPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQLTTDGEPGIYNGVPDWVYEEE   98 (353)
T ss_dssp             EEEEEEETTTT---EEEESS-EETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEESES--TTTEEESB--HHHHHH
T ss_pred             eeEEEEecCCC---ceEECcCCccccccceeecCCCeeEEEe-cCceEEEECCCCCeEEeccccceeEEcCccceecccc
Confidence            46888999986   3444443356788899999999988875 567999987554    11                   


Q ss_pred             --ccceEEEEccCCCEEEEEecCC
Q psy7062          92 --QQVNALRITPDKQLLASAEELS  113 (148)
Q Consensus        92 --~~i~~~~~sp~~~~l~~~~~d~  113 (148)
                        ..-..+-||||+++|+....|.
T Consensus        99 v~~~~~~~~WSpd~~~la~~~~d~  122 (353)
T PF00930_consen   99 VFDRRSAVWWSPDSKYLAFLRFDE  122 (353)
T ss_dssp             TSSSSBSEEE-TTSSEEEEEEEE-
T ss_pred             ccccccceEECCCCCEEEEEEECC
Confidence              3346788999999998876544

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>KOG2041|consensus

Probab=95.21  E-value=0.05  Score=43.26  Aligned_cols=99  Identities=10%  Similarity=-0.013  Sum_probs=73.5

Q ss_pred             CCCCccEEEEEecCCeEEEEeCCCCCCCceEEecC--CCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc------cc-
Q psy7062          21 SKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEG--VSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC------FI-   91 (148)
Q Consensus        21 ~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~--~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~------~~-   91 (148)
                      .+.+.+-|.+...+|-|.+|-+=.+  .-...+..  ..+.|.+++|+.||..++..-.||.+.+=.+...      ++ 
T Consensus        79 WNe~~QKLTtSDt~GlIiVWmlykg--sW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRIwgKeLkg  156 (1189)
T KOG2041|consen   79 WNENNQKLTTSDTSGLIIVWMLYKG--SWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRIWGKELKG  156 (1189)
T ss_pred             eccccccccccCCCceEEEEeeecc--cHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccceecchhcch
Confidence            3344677888678889999988655  43333222  3567899999999999999999999988777544      33 


Q ss_pred             ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          92 QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        92 ~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                      .....+.|++|.+.++.+-.+|      .+.+||-.
T Consensus       157 ~~l~hv~ws~D~~~~Lf~~ang------e~hlydnq  186 (1189)
T KOG2041|consen  157 QLLAHVLWSEDLEQALFKKANG------ETHLYDNQ  186 (1189)
T ss_pred             heccceeecccHHHHHhhhcCC------cEEEeccc
Confidence            5566789999998887777655      78888754

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=95.18  E-value=0.36  Score=35.31  Aligned_cols=89  Identities=16%  Similarity=0.187  Sum_probs=60.1

Q ss_pred             CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEe----------CCCcEEEEECCcc-------cc------
Q psy7062          35 QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGG----------EDCRARIWDLSLC-------FI------   91 (148)
Q Consensus        35 ~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~----------~~~~i~l~d~~~~-------~~------   91 (148)
                      +.+.++|.+++  +.+.++.  .+..-.+.++|+++.+++++          +...|.+||..+.       +.      
T Consensus        17 ~rv~viD~d~~--k~lGmi~--~g~~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~   92 (342)
T PF06433_consen   17 SRVYVIDADSG--KLLGMID--TGFLGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQ   92 (342)
T ss_dssp             EEEEEEETTTT--EEEEEEE--EESSEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--
T ss_pred             ceEEEEECCCC--cEEEEee--cccCCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchhe
Confidence            47889999988  7777776  33334567899999887643          2346899999887       11      


Q ss_pred             --ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          92 --QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        92 --~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                        .....++++.|+++++.-....    ...|.+.|+...+.
T Consensus        93 ~~~~~~~~~ls~dgk~~~V~N~TP----a~SVtVVDl~~~kv  130 (342)
T PF06433_consen   93 VVPYKNMFALSADGKFLYVQNFTP----ATSVTVVDLAAKKV  130 (342)
T ss_dssp             BS--GGGEEE-TTSSEEEEEEESS----SEEEEEEETTTTEE
T ss_pred             ecccccceEEccCCcEEEEEccCC----CCeEEEEECCCCce
Confidence              2234467788888888876544    55788888876554

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=95.09  E-value=1.5  Score=35.62  Aligned_cols=70  Identities=13%  Similarity=0.095  Sum_probs=48.8

Q ss_pred             CCEEEEEEccCCCEEEEEeCCCcEEEEECCc---------c---------------cc----ccceEEEEccC---CCEE
Q psy7062          58 KNVVEVGFQEDGKWMFTGGEDCRARIWDLSL---------C---------------FI----QQVNALRITPD---KQLL  106 (148)
Q Consensus        58 ~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~---------~---------------~~----~~i~~~~~sp~---~~~l  106 (148)
                      -.|..+.+||+|..++..+..+...+.=.+.         +               |.    ..+..+.|+|.   +..|
T Consensus        85 f~v~~i~~n~~g~~lal~G~~~v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~l  164 (717)
T PF10168_consen   85 FEVHQISLNPTGSLLALVGPRGVVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSHL  164 (717)
T ss_pred             eeEEEEEECCCCCEEEEEcCCcEEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCeE
Confidence            3688899999999888777665433222111         1               11    57888999995   4778


Q ss_pred             EEEecCCceecCeeEEEeecCCCccee
Q psy7062         107 ASAEELSCCYCGAAVFVYNSCYPAAVV  133 (148)
Q Consensus       107 ~~~~~d~~~~~~~~i~~~d~~~~~~~~  133 (148)
                      +.-..|+      ++++||+..+..+.
T Consensus       165 ~vLtsdn------~lR~y~~~~~~~p~  185 (717)
T PF10168_consen  165 VVLTSDN------TLRLYDISDPQHPW  185 (717)
T ss_pred             EEEecCC------EEEEEecCCCCCCe
Confidence            8877777      99999998765443

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.08  E-value=0.71  Score=33.13  Aligned_cols=93  Identities=14%  Similarity=0.140  Sum_probs=58.6

Q ss_pred             EEEEeCCCCccEEEEEecCC-eEEEEeCCCCCCCceEEecCCCCC--EEEEEEccCCCEEEEEeCC-----CcEEEEECC
Q psy7062          16 STVFDSKHLVEMVAALGGYQ-HIRMYDFGSNNPNPVINCEGVSKN--VVEVGFQEDGKWMFTGGED-----CRARIWDLS   87 (148)
Q Consensus        16 ~~~~~~~~~~~~l~~~~~d~-~v~~~d~~~~~~~~~~~~~~~~~~--i~~~~~sp~~~~l~~~~~~-----~~i~l~d~~   87 (148)
                      .++++|.. ..-++.+-.-| ...+||....  +...++...+.+  .-.=.|||||.+|+..-+|     |.|=+||.+
T Consensus        72 gi~~~p~~-~ravafARrPGtf~~vfD~~~~--~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r  148 (366)
T COG3490          72 GIAFHPAL-PRAVAFARRPGTFAMVFDPNGA--QEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDAR  148 (366)
T ss_pred             CeecCCCC-cceEEEEecCCceEEEECCCCC--cCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEecc
Confidence            45556543 33334434444 3677888877  333333222221  2223689999998775443     678899998


Q ss_pred             ccc------c---ccceEEEEccCCCEEEEEec
Q psy7062          88 LCF------I---QQVNALRITPDKQLLASAEE  111 (148)
Q Consensus        88 ~~~------~---~~i~~~~~sp~~~~l~~~~~  111 (148)
                      .+|      .   -....+.|.+||+.++.++.
T Consensus       149 ~~fqrvgE~~t~GiGpHev~lm~DGrtlvvanG  181 (366)
T COG3490         149 EGFQRVGEFSTHGIGPHEVTLMADGRTLVVANG  181 (366)
T ss_pred             cccceecccccCCcCcceeEEecCCcEEEEeCC
Confidence            772      2   55788999999999888764

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=94.98  E-value=0.49  Score=32.48  Aligned_cols=70  Identities=10%  Similarity=0.158  Sum_probs=49.0

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEE-------ec-------CCCCCEEEEEEccCCCEEEEEeCCCc
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVIN-------CE-------GVSKNVVEVGFQEDGKWMFTGGEDCR   80 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~-------~~-------~~~~~i~~~~~sp~~~~l~~~~~~~~   80 (148)
                      +++.+...  +.+|.+.+.+|.+.+||++++  +.+..       +.       .....|..+.++.+|..+++-+ +|.
T Consensus        14 ~~~~l~~~--~~~Ll~iT~~G~l~vWnl~~~--k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~   88 (219)
T PF07569_consen   14 PVSFLECN--GSYLLAITSSGLLYVWNLKKG--KAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGD   88 (219)
T ss_pred             ceEEEEeC--CCEEEEEeCCCeEEEEECCCC--eeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCC
Confidence            34445555  566666699999999999987  32211       11       2456788899999999887765 467


Q ss_pred             EEEEECCcc
Q psy7062          81 ARIWDLSLC   89 (148)
Q Consensus        81 i~l~d~~~~   89 (148)
                      ...||..-.
T Consensus        89 ~y~y~~~L~   97 (219)
T PF07569_consen   89 SYSYSPDLG   97 (219)
T ss_pred             EEEeccccc
Confidence            888888665

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=94.95  E-value=0.45  Score=28.98  Aligned_cols=71  Identities=14%  Similarity=0.138  Sum_probs=46.6

Q ss_pred             EEEEEEcc---CC-CEEEEEeCCCcEEEEECCcc---cc--ccceEEEEccCCCEEEEEecCCce-ecCeeEEEeecCCC
Q psy7062          60 VVEVGFQE---DG-KWMFTGGEDCRARIWDLSLC---FI--QQVNALRITPDKQLLASAEELSCC-YCGAAVFVYNSCYP  129 (148)
Q Consensus        60 i~~~~~sp---~~-~~l~~~~~~~~i~l~d~~~~---~~--~~i~~~~~sp~~~~l~~~~~d~~~-~~~~~i~~~d~~~~  129 (148)
                      |++++++.   +| +.|+.|+.|..|++|+-...   +.  ..+.++.-... ..++.+..+|.+ ......++|.+.+.
T Consensus         2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~e~~~Ei~e~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~~RlWRiKSK   80 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGDEIVAEITETDKVTSLCSLGG-GRFAYALANGTVGVYDRSQRLWRIKSK   80 (111)
T ss_pred             eeEEEEEecCCCCcceEEEecCCcEEEEEeCCcEEEEEecccceEEEEEcCC-CEEEEEecCCEEEEEeCcceeeeeccC
Confidence            45565553   44 48999999999999998776   32  77777776555 557888877732 11224566666654


Q ss_pred             cc
Q psy7062         130 AA  131 (148)
Q Consensus       130 ~~  131 (148)
                      ..
T Consensus        81 ~~   82 (111)
T PF14783_consen   81 NQ   82 (111)
T ss_pred             CC
Confidence            43

>KOG4649|consensus

Probab=94.77  E-value=0.99  Score=32.01  Aligned_cols=63  Identities=13%  Similarity=0.039  Sum_probs=49.6

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC   89 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~   89 (148)
                      |++++.|+..+.+.+.+.+++  .....+..-...=......+++..+..++.|+..+..|.++.
T Consensus        63 gdfVV~GCy~g~lYfl~~~tG--s~~w~f~~~~~vk~~a~~d~~~glIycgshd~~~yalD~~~~  125 (354)
T KOG4649|consen   63 GDFVVLGCYSGGLYFLCVKTG--SQIWNFVILETVKVRAQCDFDGGLIYCGSHDGNFYALDPKTY  125 (354)
T ss_pred             CCEEEEEEccCcEEEEEecch--hheeeeeehhhhccceEEcCCCceEEEecCCCcEEEeccccc
Confidence            778899999999999999998  777766543222222344679999999999999999999887

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=94.71  E-value=0.99  Score=32.61  Aligned_cols=99  Identities=11%  Similarity=0.093  Sum_probs=60.9

Q ss_pred             EEEEeCCCCccEEEEEecCCeEEEEeCCCCCCC-ceEEecC-CCCCEEEEEEccCCCEEEEEeCCCcEEEEECC--cc-c
Q psy7062          16 STVFDSKHLVEMVAALGGYQHIRMYDFGSNNPN-PVINCEG-VSKNVVEVGFQEDGKWMFTGGEDCRARIWDLS--LC-F   90 (148)
Q Consensus        16 ~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~-~~~~~~~-~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~--~~-~   90 (148)
                      ..+..+-  +..|+. +..+.+.+|+++..  + .+....- ....+.++..  .+.+++.|+....+.++..+  .. +
T Consensus        91 V~ai~~~--~~~lv~-~~g~~l~v~~l~~~--~~l~~~~~~~~~~~i~sl~~--~~~~I~vgD~~~sv~~~~~~~~~~~l  163 (321)
T PF03178_consen   91 VTAICSF--NGRLVV-AVGNKLYVYDLDNS--KTLLKKAFYDSPFYITSLSV--FKNYILVGDAMKSVSLLRYDEENNKL  163 (321)
T ss_dssp             EEEEEEE--TTEEEE-EETTEEEEEEEETT--SSEEEEEEE-BSSSEEEEEE--ETTEEEEEESSSSEEEEEEETTTE-E
T ss_pred             ceEhhhh--CCEEEE-eecCEEEEEEccCc--ccchhhheecceEEEEEEec--cccEEEEEEcccCEEEEEEEccCCEE
Confidence            4444443  334555 44689999999987  4 3322221 2335555544  46688889887777766443  33 2


Q ss_pred             c--------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          91 I--------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        91 ~--------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                      .        ..+.++.+-++++.++.+..+|      .+.++...
T Consensus       164 ~~va~d~~~~~v~~~~~l~d~~~~i~~D~~g------nl~~l~~~  202 (321)
T PF03178_consen  164 ILVARDYQPRWVTAAEFLVDEDTIIVGDKDG------NLFVLRYN  202 (321)
T ss_dssp             EEEEEESS-BEEEEEEEE-SSSEEEEEETTS------EEEEEEE-
T ss_pred             EEEEecCCCccEEEEEEecCCcEEEEEcCCC------eEEEEEEC
Confidence            1        5577777876667888888877      67766654

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>PRK13616 lipoprotein LpqB; Provisional

Probab=94.67  E-value=1.1  Score=35.41  Aligned_cols=89  Identities=13%  Similarity=0.079  Sum_probs=51.8

Q ss_pred             EEEEEeCCCCccEEEEEe------cCC--eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC--------
Q psy7062          15 ISTVFDSKHLVEMVAALG------GYQ--HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED--------   78 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~------~d~--~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~--------   78 (148)
                      ...+.+++  |+.++..-      .|.  .+.+.+....   ......+  ...+.-.|+|+|..+.+.+..        
T Consensus       353 sspaiSpd--G~~vA~v~~~~~~~~d~~s~Lwv~~~gg~---~~~lt~g--~~~t~PsWspDG~~lw~v~dg~~~~~v~~  425 (591)
T PRK13616        353 TSAALSRS--GRQVAAVVTLGRGAPDPASSLWVGPLGGV---AVQVLEG--HSLTRPSWSLDADAVWVVVDGNTVVRVIR  425 (591)
T ss_pred             ccceECCC--CCEEEEEEeecCCCCCcceEEEEEeCCCc---ceeeecC--CCCCCceECCCCCceEEEecCcceEEEec
Confidence            45566676  55554433      233  4555554322   2222222  237778999998866665422        


Q ss_pred             ----CcEEEEECCcc-c----cccceEEEEccCCCEEEEEe
Q psy7062          79 ----CRARIWDLSLC-F----IQQVNALRITPDKQLLASAE  110 (148)
Q Consensus        79 ----~~i~l~d~~~~-~----~~~i~~~~~sp~~~~l~~~~  110 (148)
                          +.+.+.++..+ .    ...|..+.|||||..++...
T Consensus       426 ~~~~gql~~~~vd~ge~~~~~~g~Issl~wSpDG~RiA~i~  466 (591)
T PRK13616        426 DPATGQLARTPVDASAVASRVPGPISELQLSRDGVRAAMII  466 (591)
T ss_pred             cCCCceEEEEeccCchhhhccCCCcCeEEECCCCCEEEEEE
Confidence                23444455443 1    25799999999999888766

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=94.61  E-value=0.16  Score=25.34  Aligned_cols=30  Identities=27%  Similarity=0.389  Sum_probs=21.6

Q ss_pred             cceEEEEccCC---CEEEEEecCCceecCeeEEEeecCC
Q psy7062          93 QVNALRITPDK---QLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        93 ~i~~~~~sp~~---~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                      .++++.|+|+.   .+|+.+-..+      .|.++|.++
T Consensus         2 AvR~~kFsP~~~~~DLL~~~E~~g------~vhi~D~R~   34 (43)
T PF10313_consen    2 AVRCCKFSPEPGGNDLLAWAEHQG------RVHIVDTRS   34 (43)
T ss_pred             CeEEEEeCCCCCcccEEEEEccCC------eEEEEEccc
Confidence            57888999744   3666666544      899999884

It contains a characteristic DLL sequence motif.

>KOG2395|consensus

Probab=94.49  E-value=0.44  Score=36.84  Aligned_cols=84  Identities=11%  Similarity=0.118  Sum_probs=56.1

Q ss_pred             cEEEEEecCCeEEEEeCCCCCCCceEEecCCC----CCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc---cc
Q psy7062          26 EMVAALGGYQHIRMYDFGSNNPNPVINCEGVS----KNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI---QQ   93 (148)
Q Consensus        26 ~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~----~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~---~~   93 (148)
                      +.|+. -++..|.-||.+-.....+...+.|.    ....|++-.. .-+++.|+.+|.|+|||--..     |+   .+
T Consensus       396 ~TlvG-Ls~n~vfriDpRv~~~~kl~~~q~kqy~~k~nFsc~aTT~-sG~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~  473 (644)
T KOG2395|consen  396 QTLVG-LSDNSVFRIDPRVQGKNKLAVVQSKQYSTKNNFSCFATTE-SGYIVVGSLKGDIRLYDRIGRRAKTALPGLGDA  473 (644)
T ss_pred             ccEEe-ecCCceEEecccccCcceeeeeeccccccccccceeeecC-CceEEEeecCCcEEeehhhhhhhhhcccccCCc
Confidence            34444 55678888899865323444444332    2233333322 336889999999999998332     44   88


Q ss_pred             ceEEEEccCCCEEEEEec
Q psy7062          94 VNALRITPDKQLLASAEE  111 (148)
Q Consensus        94 i~~~~~sp~~~~l~~~~~  111 (148)
                      |..+..+.+|++++..+.
T Consensus       474 I~hVdvtadGKwil~Tc~  491 (644)
T KOG2395|consen  474 IKHVDVTADGKWILATCK  491 (644)
T ss_pred             eeeEEeeccCcEEEEecc
Confidence            999999999999888875

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=94.16  E-value=0.5  Score=35.33  Aligned_cols=71  Identities=13%  Similarity=0.087  Sum_probs=48.3

Q ss_pred             EEEEEEccCCCEEEEE-eCCC----cEEEEECCcc--c----c-ccceEEEEccCCCEEEEEecCCcee-----cCeeEE
Q psy7062          60 VVEVGFQEDGKWMFTG-GEDC----RARIWDLSLC--F----I-QQVNALRITPDKQLLASAEELSCCY-----CGAAVF  122 (148)
Q Consensus        60 i~~~~~sp~~~~l~~~-~~~~----~i~l~d~~~~--~----~-~~i~~~~~sp~~~~l~~~~~d~~~~-----~~~~i~  122 (148)
                      +...++||+|+.++.+ +..|    .++++|+.++  +    . .....+.|.++++.|+....+..-.     ....|+
T Consensus       126 ~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~  205 (414)
T PF02897_consen  126 LGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENPKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVY  205 (414)
T ss_dssp             EEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEEESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEEE
T ss_pred             eeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcccccccceEEEeCCCCEEEEEEeCcccccccCCCCcEEE
Confidence            3467889999977654 4433    5999999988  2    2 2233499999998877776555322     255788


Q ss_pred             EeecCCCc
Q psy7062         123 VYNSCYPA  130 (148)
Q Consensus       123 ~~d~~~~~  130 (148)
                      .|++-++.
T Consensus       206 ~~~~gt~~  213 (414)
T PF02897_consen  206 RHKLGTPQ  213 (414)
T ss_dssp             EEETTS-G
T ss_pred             EEECCCCh
Confidence            88877654

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=94.13  E-value=0.31  Score=24.32  Aligned_cols=31  Identities=16%  Similarity=0.057  Sum_probs=24.3

Q ss_pred             CEEEEEEccCCC---EEEEEeCCCcEEEEECCcc
Q psy7062          59 NVVEVGFQEDGK---WMFTGGEDCRARIWDLSLC   89 (148)
Q Consensus        59 ~i~~~~~sp~~~---~l~~~~~~~~i~l~d~~~~   89 (148)
                      .+.+++|||+..   +|+..-..+.+.++|+++.
T Consensus         2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~~   35 (43)
T PF10313_consen    2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRSN   35 (43)
T ss_pred             CeEEEEeCCCCCcccEEEEEccCCeEEEEEcccC
Confidence            577899998544   6777767789999999854

It contains a characteristic DLL sequence motif.

>KOG1832|consensus

Probab=94.10  E-value=0.095  Score=42.84  Aligned_cols=77  Identities=9%  Similarity=0.097  Sum_probs=60.1

Q ss_pred             CceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc---ccceEEEEccCCCEEEEEecCCceecCe
Q psy7062          48 NPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI---QQVNALRITPDKQLLASAEELSCCYCGA  119 (148)
Q Consensus        48 ~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~  119 (148)
                      +..+.+..|+...++++|+-+.+.++.|+..|.+++|+..++     ..   +.++.+.-+.+|..+++.+.-.    ..
T Consensus      1092 r~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S----~P 1167 (1516)
T KOG1832|consen 1092 RSWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSS----SP 1167 (1516)
T ss_pred             ccchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeecccc----Cc
Confidence            345667778889999999999999999999999999999998     11   6777887778888776665422    23


Q ss_pred             eEEEeecCC
Q psy7062         120 AVFVYNSCY  128 (148)
Q Consensus       120 ~i~~~d~~~  128 (148)
                      ...+|+...
T Consensus      1168 lsaLW~~~s 1176 (1516)
T KOG1832|consen 1168 LSALWDASS 1176 (1516)
T ss_pred             hHHHhcccc
Confidence            467888654

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=93.91  E-value=1.3  Score=30.03  Aligned_cols=99  Identities=10%  Similarity=0.046  Sum_probs=61.5

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCC----------EEEEEEccCCCEEEEEeCCCcEEEEECCcc---cc
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKN----------VVEVGFQEDGKWMFTGGEDCRARIWDLSLC---FI   91 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~----------i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---~~   91 (148)
                      ++.++.+..++.+..+|++++  +.+.........          +..-.+..++ .++.++.++.+.-+|+.++   ..
T Consensus       122 ~~~~~~~~~~g~l~~~d~~tG--~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~d~~tg~~~w~  198 (238)
T PF13360_consen  122 GDRLYVGTSSGKLVALDPKTG--KLLWKYPVGEPRGSSPISSFSDINGSPVISDG-RVYVSSGDGRVVAVDLATGEKLWS  198 (238)
T ss_dssp             TTEEEEEETCSEEEEEETTTT--EEEEEEESSTT-SS--EEEETTEEEEEECCTT-EEEEECCTSSEEEEETTTTEEEEE
T ss_pred             cCEEEEEeccCcEEEEecCCC--cEEEEeecCCCCCCcceeeecccccceEEECC-EEEEEcCCCeEEEEECCCCCEEEE
Confidence            566677677899999999999  776666543311          1222222344 6666666775333399887   22


Q ss_pred             ccceEEE--EccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062          92 QQVNALR--ITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV  132 (148)
Q Consensus        92 ~~i~~~~--~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~  132 (148)
                      ..+....  ...++..++.++.++      .+..||+.+.+..
T Consensus       199 ~~~~~~~~~~~~~~~~l~~~~~~~------~l~~~d~~tG~~~  235 (238)
T PF13360_consen  199 KPISGIYSLPSVDGGTLYVTSSDG------RLYALDLKTGKVV  235 (238)
T ss_dssp             ECSS-ECECEECCCTEEEEEETTT------EEEEEETTTTEEE
T ss_pred             ecCCCccCCceeeCCEEEEEeCCC------EEEEEECCCCCEE
Confidence            1122221  345777777777766      8999999987654

...

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=93.65  E-value=0.68  Score=35.86  Aligned_cols=60  Identities=17%  Similarity=0.261  Sum_probs=48.1

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECC
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLS   87 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~   87 (148)
                      +.++|.|+..|.|++||--..  +....+++-...|..+..+.+|++++..+.. .+.+-|++
T Consensus       573 sGyIa~as~kGDirLyDRig~--rAKtalP~lG~aIk~idvta~Gk~ilaTCk~-yllL~d~~  632 (776)
T COG5167         573 SGYIAAASRKGDIRLYDRIGK--RAKTALPGLGDAIKHIDVTANGKHILATCKN-YLLLTDVP  632 (776)
T ss_pred             CceEEEecCCCceeeehhhcc--hhhhcCcccccceeeeEeecCCcEEEEeecc-eEEEEecc
Confidence            578899999999999998765  5566677778899999999999988776644 56666764

>KOG2079|consensus

Probab=93.55  E-value=0.19  Score=41.73  Aligned_cols=75  Identities=12%  Similarity=0.026  Sum_probs=56.7

Q ss_pred             EEEEccCCCEEEEEeCCCcEEEEECCcc---c------cccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062          62 EVGFQEDGKWMFTGGEDCRARIWDLSLC---F------IQQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV  132 (148)
Q Consensus        62 ~~~~sp~~~~l~~~~~~~~i~l~d~~~~---~------~~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~  132 (148)
                      .++..-.+-+++.|+..|.+-++|....   +      +.++.+++|+-+|+.++.|-.+|      .|.+||....+..
T Consensus        92 v~s~a~~~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G------~V~v~D~~~~k~l  165 (1206)
T KOG2079|consen   92 VISSAIVVVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDG------HVTVWDMHRAKIL  165 (1206)
T ss_pred             eeeeeeeeeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCC------cEEEEEccCCcce
Confidence            3334445667888888888888887663   1      18999999999999999998877      8999999876666


Q ss_pred             eccCcccCcc
Q psy7062         133 VASNTLVKPQ  142 (148)
Q Consensus       133 ~~~~~~~~~~  142 (148)
                      ....+...|.
T Consensus       166 ~~i~e~~ap~  175 (1206)
T KOG2079|consen  166 KVITEHGAPV  175 (1206)
T ss_pred             eeeeecCCcc
Confidence            6555544443

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=93.49  E-value=0.44  Score=36.30  Aligned_cols=55  Identities=18%  Similarity=0.232  Sum_probs=36.7

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEE
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWD   85 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d   85 (148)
                      |.+|.. ..++.|.+||.+++  +.++.+.. . .|..+.|+++|.+++..+.+ .+.+++
T Consensus       117 G~LL~~-~~~~~i~~yDw~~~--~~i~~i~v-~-~vk~V~Ws~~g~~val~t~~-~i~il~  171 (443)
T PF04053_consen  117 GNLLGV-KSSDFICFYDWETG--KLIRRIDV-S-AVKYVIWSDDGELVALVTKD-SIYILK  171 (443)
T ss_dssp             SSSEEE-EETTEEEEE-TTT----EEEEESS---E-EEEEE-TTSSEEEEE-S--SEEEEE
T ss_pred             CcEEEE-ECCCCEEEEEhhHc--ceeeEEec-C-CCcEEEEECCCCEEEEEeCC-eEEEEE
Confidence            677777 45568999999998  88888873 2 38899999999999888766 444443

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>KOG2444|consensus

Probab=93.22  E-value=0.25  Score=34.01  Aligned_cols=63  Identities=10%  Similarity=0.073  Sum_probs=48.5

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEecCCC-CCEEEEEEccCCCEEEEE--eCCCcEEEEECCcc
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVS-KNVVEVGFQEDGKWMFTG--GEDCRARIWDLSLC   89 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~-~~i~~~~~sp~~~~l~~~--~~~~~i~l~d~~~~   89 (148)
                      +.+.++++.++.++.|+++..  +.+...-.|+ .....+.++..++.+...  |.+..++.|++...
T Consensus       114 ~~~~c~~~~dg~ir~~n~~p~--k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~~  179 (238)
T KOG2444|consen  114 SSLGCVGAQDGRIRACNIKPN--KVLGYVGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVEKI  179 (238)
T ss_pred             cceeEEeccCCceeeeccccC--ceeeeeccccCCCcceeEEecCCceEEeeccccchhhhhcchhhh
Confidence            457788899999999999887  6666665566 556666777777777777  77888889988665

>KOG4649|consensus

Probab=92.91  E-value=2.4  Score=30.12  Aligned_cols=96  Identities=10%  Similarity=0.022  Sum_probs=65.4

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc--ccc-eE
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI--QQV-NA   96 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~--~~i-~~   96 (148)
                      ..+++.|+..+.+..-|..++  +.+..- .-..++.+-+.- -|.+++.|+..+.+.+.+.+++     |.  ..+ ..
T Consensus        23 kT~v~igSHs~~~~avd~~sG--~~~We~-ilg~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~   98 (354)
T KOG4649|consen   23 KTLVVIGSHSGIVIAVDPQSG--NLIWEA-ILGVRIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVR   98 (354)
T ss_pred             ceEEEEecCCceEEEecCCCC--cEEeeh-hhCceeeeeeEE-ECCEEEEEEccCcEEEEEecchhheeeeeehhhhccc
Confidence            577788788888888899988  544332 123333332211 3777999999999999999998     32  222 22


Q ss_pred             EEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          97 LRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        97 ~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                      ....+++..+..++.|+      ..+..|.++..
T Consensus        99 a~~d~~~glIycgshd~------~~yalD~~~~~  126 (354)
T KOG4649|consen   99 AQCDFDGGLIYCGSHDG------NFYALDPKTYG  126 (354)
T ss_pred             eEEcCCCceEEEecCCC------cEEEecccccc
Confidence            34567999999999988      66666665443

>KOG3630|consensus

Probab=92.65  E-value=0.35  Score=40.60  Aligned_cols=91  Identities=15%  Similarity=0.138  Sum_probs=61.7

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----   89 (148)
                      .+..|.|...-. .+++..|..|++..+.... .....+. .+...++++|+|.|+.++.|...|++.-|...-.     
T Consensus       159 ~~~~wnP~vp~n-~av~l~dlsl~V~~~~~~~-~~v~s~p-~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~leik~~i  235 (1405)
T KOG3630|consen  159 LKNVWNPLVPLN-SAVDLSDLSLRVKSTKQLA-QNVTSFP-VTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSLEIKSEI  235 (1405)
T ss_pred             ccccccCCccch-hhhhccccchhhhhhhhhh-hhhcccC-cccceeeEEeccccceeeEecCCCeEEEeecccceeecc
Confidence            455566544333 3444777888887776541 2222332 4677899999999999999999999988866433     


Q ss_pred             -----cc-ccceEEEEccCCCEEEE
Q psy7062          90 -----FI-QQVNALRITPDKQLLAS  108 (148)
Q Consensus        90 -----~~-~~i~~~~~sp~~~~l~~  108 (148)
                           ++ .++.++.|-....++++
T Consensus       236 p~Pp~~e~yrvl~v~Wl~t~eflvv  260 (1405)
T KOG3630|consen  236 PEPPVEENYRVLSVTWLSTQEFLVV  260 (1405)
T ss_pred             cCCCcCCCcceeEEEEecceeEEEE
Confidence                 22 78999999776665554

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=92.61  E-value=3.1  Score=31.55  Aligned_cols=40  Identities=13%  Similarity=0.121  Sum_probs=30.2

Q ss_pred             EEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCC
Q psy7062          16 STVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKN   59 (148)
Q Consensus        16 ~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~   59 (148)
                      .+..+|.  +.+.|+..+-|.|.++|+.++  ..++.+++..+.
T Consensus       312 ~i~~sP~--~~laA~tDslGRV~LiD~~~~--~vvrmWKGYRdA  351 (415)
T PF14655_consen  312 SICLSPS--GRLAAVTDSLGRVLLIDVARG--IVVRMWKGYRDA  351 (415)
T ss_pred             EEEECCC--CCEEEEEcCCCcEEEEECCCC--hhhhhhccCccc
Confidence            4444565  788888666679999999998  888888887653

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=92.48  E-value=3.1  Score=30.17  Aligned_cols=87  Identities=15%  Similarity=0.127  Sum_probs=50.4

Q ss_pred             CCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCc-c---------c-
Q psy7062          22 KHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSL-C---------F-   90 (148)
Q Consensus        22 ~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~-~---------~-   90 (148)
                      ..+|.++++++......-||....  .-...-.....+|..+.|+|++...+.+ ..+.+++-+... .         . 
T Consensus       153 ~~dG~~vavs~~G~~~~s~~~G~~--~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~~~~~w~~~~~~~~  229 (302)
T PF14870_consen  153 SSDGRYVAVSSRGNFYSSWDPGQT--TWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPDDGETWSEPIIPIK  229 (302)
T ss_dssp             -TTS-EEEEETTSSEEEEE-TT-S--S-EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TTEEEEE---B-TTS
T ss_pred             CCCCcEEEEECcccEEEEecCCCc--cceEEccCccceehhceecCCCCEEEEe-CCcEEEEccCCCCccccccccCCcc
Confidence            344888888544445667776543  2222333356889999999998876655 888898888322 2         1 


Q ss_pred             c--ccceEEEEccCCCEEEEEec
Q psy7062          91 I--QQVNALRITPDKQLLASAEE  111 (148)
Q Consensus        91 ~--~~i~~~~~sp~~~~l~~~~~  111 (148)
                      .  -.+..++|.++....++++.
T Consensus       230 ~~~~~~ld~a~~~~~~~wa~gg~  252 (302)
T PF14870_consen  230 TNGYGILDLAYRPPNEIWAVGGS  252 (302)
T ss_dssp             S--S-EEEEEESSSS-EEEEEST
T ss_pred             cCceeeEEEEecCCCCEEEEeCC
Confidence            1  44788899988887776654

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=92.43  E-value=3.3  Score=31.41  Aligned_cols=37  Identities=8%  Similarity=0.047  Sum_probs=31.5

Q ss_pred             ecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc
Q psy7062          53 CEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC   89 (148)
Q Consensus        53 ~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~   89 (148)
                      +......+..+..+|++++.++.+.-|.|.|+|+..+
T Consensus       303 l~D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~  339 (415)
T PF14655_consen  303 LPDSKREGESICLSPSGRLAAVTDSLGRVLLIDVARG  339 (415)
T ss_pred             eccCCceEEEEEECCCCCEEEEEcCCCcEEEEECCCC
Confidence            3334566899999999999999888899999999988

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=92.15  E-value=3.8  Score=30.52  Aligned_cols=21  Identities=5%  Similarity=0.036  Sum_probs=15.1

Q ss_pred             CCEEEEEeCCCcEEEEECCcc
Q psy7062          69 GKWMFTGGEDCRARIWDLSLC   89 (148)
Q Consensus        69 ~~~l~~~~~~~~i~l~d~~~~   89 (148)
                      +..++.++.+|.+...|..++
T Consensus       335 ~g~l~v~~~~G~l~~ld~~tG  355 (394)
T PRK11138        335 NGYLVVGDSEGYLHWINREDG  355 (394)
T ss_pred             CCEEEEEeCCCEEEEEECCCC
Confidence            445666777788888887776

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=91.87  E-value=0.93  Score=33.29  Aligned_cols=58  Identities=14%  Similarity=0.290  Sum_probs=41.5

Q ss_pred             ccCCCEEEEEe---------CCCcEEEEECCcc----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          66 QEDGKWMFTGG---------EDCRARIWDLSLC----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        66 sp~~~~l~~~~---------~~~~i~l~d~~~~----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                      |||+++++...         ..+...++|+.++    +.   ..+....|+|+|+.++.... .      .|++++....
T Consensus         1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~~~~~~~~~~~sP~g~~~~~v~~-~------nly~~~~~~~   73 (353)
T PF00930_consen    1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTPPPPKLQDAKWSPDGKYIAFVRD-N------NLYLRDLATG   73 (353)
T ss_dssp             -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS-EETTBSEEEE-SSSTEEEEEET-T------EEEEESSTTS
T ss_pred             CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcCCccccccceeecCCCeeEEEec-C------ceEEEECCCC
Confidence            57888776632         2357889999987    22   57889999999999888864 2      5888887655


Q ss_pred             c
Q psy7062         130 A  130 (148)
Q Consensus       130 ~  130 (148)
                      .
T Consensus        74 ~   74 (353)
T PF00930_consen   74 Q   74 (353)
T ss_dssp             E
T ss_pred             C
Confidence            3

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>KOG4441|consensus

Probab=91.58  E-value=4  Score=32.33  Aligned_cols=103  Identities=18%  Similarity=0.191  Sum_probs=63.4

Q ss_pred             ccEEEEEecC-C-----eEEEEeCCCCCCCceEEecCCCCCEEEEEEc-cCCCEEEEEeCCC-----cEEEEECCcc-cc
Q psy7062          25 VEMVAALGGY-Q-----HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQ-EDGKWMFTGGEDC-----RARIWDLSLC-FI   91 (148)
Q Consensus        25 ~~~l~~~~~d-~-----~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~s-p~~~~l~~~~~~~-----~i~l~d~~~~-~~   91 (148)
                      +.+.++|+.+ +     ++.+||..+.....+..+.  .. -..+... -+|...+.|+.||     .+..||..+. +.
T Consensus       333 ~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~~a~M~--~~-R~~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~  409 (571)
T KOG4441|consen  333 GKLYVVGGYDSGSDRLSSVERYDPRTNQWTPVAPMN--TK-RSDFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVTNKWT  409 (571)
T ss_pred             CEEEEEccccCCCcccceEEEecCCCCceeccCCcc--Cc-cccceeEEECCEEEEEeccccccccccEEEecCCCCccc
Confidence            5778888888 2     6889999887322222222  22 2223333 3788888898886     4778888776 22


Q ss_pred             ------ccceEEEEc-cCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          92 ------QQVNALRIT-PDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        92 ------~~i~~~~~s-p~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                            .+....... -+|+..+.|+.++.-..-..+..||..+..
T Consensus       410 ~va~m~~~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~  455 (571)
T KOG4441|consen  410 PVAPMLTRRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETNT  455 (571)
T ss_pred             ccCCCCcceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCCc
Confidence                  222233322 388888888877744334578899977554

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=91.47  E-value=4.6  Score=30.12  Aligned_cols=110  Identities=15%  Similarity=0.175  Sum_probs=74.8

Q ss_pred             CcEEEEEeCCCCccEEEEEec---CCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEe-CCCcEEEEECCc
Q psy7062          13 GQISTVFDSKHLVEMVAALGG---YQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGG-EDCRARIWDLSL   88 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~---d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-~~~~i~l~d~~~   88 (148)
                      .+..++++++  ++.+.++..   ++++.+.|..+.  ..+.....-.. -..++++|+|..++... .++.+.+.|...
T Consensus       117 ~P~~~~~~~~--~~~vYV~n~~~~~~~vsvid~~t~--~~~~~~~vG~~-P~~~a~~p~g~~vyv~~~~~~~v~vi~~~~  191 (381)
T COG3391         117 GPVGLAVDPD--GKYVYVANAGNGNNTVSVIDAATN--KVTATIPVGNT-PTGVAVDPDGNKVYVTNSDDNTVSVIDTSG  191 (381)
T ss_pred             CCceEEECCC--CCEEEEEecccCCceEEEEeCCCC--eEEEEEecCCC-cceEEECCCCCeEEEEecCCCeEEEEeCCC
Confidence            5678888888  444444343   578888888887  66655442222 28899999999666555 678999999765


Q ss_pred             c--c-------c---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          89 C--F-------I---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        89 ~--~-------~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                      .  .       .   ...+.+.++|++..+.......   ....+...|..+..
T Consensus       192 ~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~---~~~~v~~id~~~~~  242 (381)
T COG3391         192 NSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGS---GSNNVLKIDTATGN  242 (381)
T ss_pred             cceeccccccccccCCCCceEEECCCCCEEEEEeccC---CCceEEEEeCCCce
Confidence            4  2       1   5567889999999777765432   12367778877544

>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=91.45  E-value=0.87  Score=21.69  Aligned_cols=29  Identities=14%  Similarity=0.297  Sum_probs=15.3

Q ss_pred             CCCCEEEEEEccCCCEEEEEe-CC--CcEEEE
Q psy7062          56 VSKNVVEVGFQEDGKWMFTGG-ED--CRARIW   84 (148)
Q Consensus        56 ~~~~i~~~~~sp~~~~l~~~~-~~--~~i~l~   84 (148)
                      ....-....|+|||+.++-.+ .+  |...||
T Consensus         7 ~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy   38 (39)
T PF07676_consen    7 SPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY   38 (39)
T ss_dssp             SSSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred             CCccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence            344556677777777654433 33  444444

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=91.29  E-value=4.8  Score=29.98  Aligned_cols=97  Identities=11%  Similarity=0.044  Sum_probs=55.5

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCC--CEE-----EEEEcc--CCCEEEEEeCCCcEEEEECCcc---cc-
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSK--NVV-----EVGFQE--DGKWMFTGGEDCRARIWDLSLC---FI-   91 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~--~i~-----~~~~sp--~~~~l~~~~~~~~i~l~d~~~~---~~-   91 (148)
                      ++.+++.+.++.+..+|.+++  +.+........  ...     .+.-.|  ++..++.++.++.+..+|..++   .+ 
T Consensus        69 ~~~vy~~~~~g~l~ald~~tG--~~~W~~~~~~~~~~~~~~~~~~~~~~~~v~~~~v~v~~~~g~l~ald~~tG~~~W~~  146 (394)
T PRK11138         69 YNKVYAADRAGLVKALDADTG--KEIWSVDLSEKDGWFSKNKSALLSGGVTVAGGKVYIGSEKGQVYALNAEDGEVAWQT  146 (394)
T ss_pred             CCEEEEECCCCeEEEEECCCC--cEeeEEcCCCcccccccccccccccccEEECCEEEEEcCCCEEEEEECCCCCCcccc
Confidence            456666678889999999998  66665442210  000     000011  3456667778899999999888   11 


Q ss_pred             ---ccceEEEEcc--CCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062          92 ---QQVNALRITP--DKQLLASAEELSCCYCGAAVFVYNSCYPAAV  132 (148)
Q Consensus        92 ---~~i~~~~~sp--~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~  132 (148)
                         ..+.+   +|  .+..++.+..++      .+.-+|..+.+..
T Consensus       147 ~~~~~~~s---sP~v~~~~v~v~~~~g------~l~ald~~tG~~~  183 (394)
T PRK11138        147 KVAGEALS---RPVVSDGLVLVHTSNG------MLQALNESDGAVK  183 (394)
T ss_pred             cCCCceec---CCEEECCEEEEECCCC------EEEEEEccCCCEe
Confidence               21111   12  234455555555      6676676655543

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=90.77  E-value=2.2  Score=31.32  Aligned_cols=72  Identities=11%  Similarity=0.145  Sum_probs=47.1

Q ss_pred             CcEEEEEeCCCCccEEEEEecCC----------eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEE-EEe-CCCc
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQ----------HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMF-TGG-EDCR   80 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~----------~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~-~~~-~~~~   80 (148)
                      |...+++++.. +.+.+. ...+          .|.++|++++  +.++.+.. ...+.+|.++.+.+.++ ..+ .++.
T Consensus       239 G~Q~~A~~~~~-~rlyvL-Mh~g~~gsHKdpgteVWv~D~~t~--krv~Ri~l-~~~~~Si~Vsqd~~P~L~~~~~~~~~  313 (342)
T PF06433_consen  239 GWQLIAYHAAS-GRLYVL-MHQGGEGSHKDPGTEVWVYDLKTH--KRVARIPL-EHPIDSIAVSQDDKPLLYALSAGDGT  313 (342)
T ss_dssp             SSS-EEEETTT-TEEEEE-EEE--TT-TTS-EEEEEEEETTTT--EEEEEEEE-EEEESEEEEESSSS-EEEEEETTTTE
T ss_pred             ceeeeeecccc-CeEEEE-ecCCCCCCccCCceEEEEEECCCC--eEEEEEeC-CCccceEEEccCCCcEEEEEcCCCCe
Confidence            45567787653 344333 3222          5888899988  78887763 34567899999888544 333 4789


Q ss_pred             EEEEECCcc
Q psy7062          81 ARIWDLSLC   89 (148)
Q Consensus        81 i~l~d~~~~   89 (148)
                      +.+||..++
T Consensus       314 l~v~D~~tG  322 (342)
T PF06433_consen  314 LDVYDAATG  322 (342)
T ss_dssp             EEEEETTT-
T ss_pred             EEEEeCcCC
Confidence            999999988

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=90.46  E-value=2.4  Score=33.13  Aligned_cols=31  Identities=26%  Similarity=0.479  Sum_probs=24.1

Q ss_pred             CEEEEEEcc----CCCEEEEEeCCCcEEEEECCcc
Q psy7062          59 NVVEVGFQE----DGKWMFTGGEDCRARIWDLSLC   89 (148)
Q Consensus        59 ~i~~~~~sp----~~~~l~~~~~~~~i~l~d~~~~   89 (148)
                      ....++++.    +..++++.+.|+++|+||+.++
T Consensus       216 ~~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~  250 (547)
T PF11715_consen  216 VAASLAVSSSEINDDTFLFTLSRDHTLRIWSLETG  250 (547)
T ss_dssp             -EEEEEE-----ETTTEEEEEETTSEEEEEETTTT
T ss_pred             ccceEEEecceeCCCCEEEEEeCCCeEEEEECCCC
Confidence            455666666    6779999999999999999887

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=90.37  E-value=3.7  Score=28.22  Aligned_cols=56  Identities=9%  Similarity=0.279  Sum_probs=39.3

Q ss_pred             EccCCCEEEEEeCCCcEEEEECCcc------------c--------c--ccceEEEEccCCCEEEEEecCCceecCeeEE
Q psy7062          65 FQEDGKWMFTGGEDCRARIWDLSLC------------F--------I--QQVNALRITPDKQLLASAEELSCCYCGAAVF  122 (148)
Q Consensus        65 ~sp~~~~l~~~~~~~~i~l~d~~~~------------~--------~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~  122 (148)
                      +..++.+++..+.+|.+++||+++.            +        .  ..|..+.++.+|.-+++-+. |      ..+
T Consensus        18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~lsn-g------~~y   90 (219)
T PF07569_consen   18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLSN-G------DSY   90 (219)
T ss_pred             EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEeC-C------CEE
Confidence            4567889999999999999999887            1        1  33566677777776655543 3      456


Q ss_pred             EeecC
Q psy7062         123 VYNSC  127 (148)
Q Consensus       123 ~~d~~  127 (148)
                      .||..
T Consensus        91 ~y~~~   95 (219)
T PF07569_consen   91 SYSPD   95 (219)
T ss_pred             Eeccc
Confidence            66644

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=89.93  E-value=5.2  Score=28.12  Aligned_cols=95  Identities=12%  Similarity=0.126  Sum_probs=64.5

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCC-CCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGV-SKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~-~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---   89 (148)
                      ...++|+++. +.++++....+.|..++.+ +  +.++.+.-. .....++.+..++.++++.-.++.+.++++...   
T Consensus        24 ~SGLTy~pd~-~tLfaV~d~~~~i~els~~-G--~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~~~~~~   99 (248)
T PF06977_consen   24 LSGLTYNPDT-GTLFAVQDEPGEIYELSLD-G--KVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTIDDDTTS   99 (248)
T ss_dssp             EEEEEEETTT-TEEEEEETTTTEEEEEETT-----EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE----TT
T ss_pred             ccccEEcCCC-CeEEEEECCCCEEEEEcCC-C--CEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEEeccccc
Confidence            6789999974 5677776677788777865 4  566666533 467899999988888887767899999888332   


Q ss_pred             --------cc--------ccceEEEEccCCCEEEEEecC
Q psy7062          90 --------FI--------QQVNALRITPDKQLLASAEEL  112 (148)
Q Consensus        90 --------~~--------~~i~~~~~sp~~~~l~~~~~d  112 (148)
                              +.        ..+-.++|+|.++.|+.+-+.
T Consensus       100 ~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~  138 (248)
T PF06977_consen  100 LDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKER  138 (248)
T ss_dssp             --EEEEEEEE---S---SS--EEEEEETTTTEEEEEEES
T ss_pred             cchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCC
Confidence                    11        446789999987777777553

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=89.93  E-value=3.2  Score=28.42  Aligned_cols=55  Identities=22%  Similarity=0.271  Sum_probs=39.4

Q ss_pred             CEEEEEeCCCcEEEEECCcc-------cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEe
Q psy7062          70 KWMFTGGEDCRARIWDLSLC-------FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVY  124 (148)
Q Consensus        70 ~~l~~~~~~~~i~l~d~~~~-------~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~  124 (148)
                      ..++.+...+.|.+|++...       |.  +.+..+.+++.|.+|++--++........+++|
T Consensus        29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y   92 (215)
T PF14761_consen   29 DALFVAASGCKVEVYDLEQEECPLLCTFSTVGRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAY   92 (215)
T ss_pred             ceEEEEcCCCEEEEEEcccCCCceeEEEcchhheeEEEeccccceEEEEEeecCCccceEEEEE
Confidence            45555566778999999843       44  889999999999999998765533322255554

>PRK13616 lipoprotein LpqB; Provisional

Probab=89.79  E-value=6.8  Score=31.22  Aligned_cols=53  Identities=9%  Similarity=0.004  Sum_probs=34.9

Q ss_pred             CCCEEEEEEccCCCEEEEEeCCCcEEE---EECCcc---c------c----ccceEEEEccCCCEEEEEec
Q psy7062          57 SKNVVEVGFQEDGKWMFTGGEDCRARI---WDLSLC---F------I----QQVNALRITPDKQLLASAEE  111 (148)
Q Consensus        57 ~~~i~~~~~sp~~~~l~~~~~~~~i~l---~d~~~~---~------~----~~i~~~~~sp~~~~l~~~~~  111 (148)
                      ...|..+.|||||+.++... ++.+.+   -....+   +      .    .....+.|.+++.++ .+..
T Consensus       447 ~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~~~l~W~~~~~L~-V~~~  515 (591)
T PRK13616        447 PGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQYALTNPREVGPGLGDTAVSLDWRTGDSLV-VGRS  515 (591)
T ss_pred             CCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCceeecccEEeecccCCccccceEecCCEEE-EEec
Confidence            45699999999999776654 456665   222222   2      1    335789999999855 4443

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=89.32  E-value=4.8  Score=30.35  Aligned_cols=82  Identities=10%  Similarity=0.067  Sum_probs=45.8

Q ss_pred             EEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEE-----ccCCCEEEEEeCCCcEEEEECCcc-------c----
Q psy7062          27 MVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGF-----QEDGKWMFTGGEDCRARIWDLSLC-------F----   90 (148)
Q Consensus        27 ~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~-----sp~~~~l~~~~~~~~i~l~d~~~~-------~----   90 (148)
                      +++. ..+..++++...+.  +..............+.+     ...+..|+.-..+|.+++|.+...       +    
T Consensus       228 ~vVv-vSe~~irv~~~~~~--k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~~~~  304 (395)
T PF08596_consen  228 YVVV-VSESDIRVFKPPKS--KGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLPPPL  304 (395)
T ss_dssp             EEEE-E-SSEEEEE-TT-----EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-SS--
T ss_pred             EEEE-EcccceEEEeCCCC--cccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCCCcc
Confidence            4555 66789999999876  433332222223333444     235667788889999999999876       1    


Q ss_pred             c-ccceEEEEccCCCEEEEEec
Q psy7062          91 I-QQVNALRITPDKQLLASAEE  111 (148)
Q Consensus        91 ~-~~i~~~~~sp~~~~l~~~~~  111 (148)
                      . ..+....++++|..+...+.
T Consensus       305 d~~~~~~ssis~~Gdi~~~~gp  326 (395)
T PF08596_consen  305 DSRRLSSSSISRNGDIFYWTGP  326 (395)
T ss_dssp             -HHHHTT-EE-TTS-EEEE-SS
T ss_pred             ccccccccEECCCCCEEEEeCc
Confidence            1 45666778889997776654

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>KOG2114|consensus

Probab=89.18  E-value=12  Score=31.08  Aligned_cols=107  Identities=10%  Similarity=0.032  Sum_probs=66.1

Q ss_pred             EEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecC--CCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          16 STVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEG--VSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        16 ~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~--~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      +++.+.+  -..+|.|-.+|.|..+.=+-...+-.+.-..  -...|+++.+..+++..+-......|.+|.+...    
T Consensus       130 ~l~Vs~~--l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~gr~p~~  207 (933)
T KOG2114|consen  130 SLAVSED--LKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKSVLFVATTEQVMLYSLSGRTPSL  207 (933)
T ss_pred             EEEEEcc--ccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCceeEEEEecceeEEEEecCCCcce
Confidence            4444444  5678888889988887443221111122112  3578999999999887444444556888888643    


Q ss_pred             --cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          90 --FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        90 --~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                        +.   ....|..+++....+++++..       .+.+||.....+
T Consensus       208 ~~ld~~G~~lnCss~~~~t~qfIca~~e-------~l~fY~sd~~~~  247 (933)
T KOG2114|consen  208 KVLDNNGISLNCSSFSDGTYQFICAGSE-------FLYFYDSDGRGP  247 (933)
T ss_pred             eeeccCCccceeeecCCCCccEEEecCc-------eEEEEcCCCcce
Confidence              11   667788888766645555432       589998764433

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=88.87  E-value=5.3  Score=32.00  Aligned_cols=61  Identities=21%  Similarity=0.248  Sum_probs=42.7

Q ss_pred             CEEEEEEccCCCEEEEEeCCCcEEEEECCcc-------cc--ccceEEEEc--cCCCEEEEEecCCceecCeeEEEee
Q psy7062          59 NVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-------FI--QQVNALRIT--PDKQLLASAEELSCCYCGAAVFVYN  125 (148)
Q Consensus        59 ~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-------~~--~~i~~~~~s--p~~~~l~~~~~d~~~~~~~~i~~~d  125 (148)
                      .+.-+.-|.-++..+..+....+.+||.+..       |.  ..|..+.|.  |+++.+++.+...      .|.+|.
T Consensus        31 ~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~------~v~l~~  102 (631)
T PF12234_consen   31 NPSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPH------HVLLYT  102 (631)
T ss_pred             CcceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCc------EEEEEE
Confidence            3444444555555555555668999999988       32  789999996  5899888888755      566653

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>PRK10115 protease 2; Provisional

Probab=88.86  E-value=4.1  Score=32.98  Aligned_cols=72  Identities=10%  Similarity=-0.018  Sum_probs=48.3

Q ss_pred             CCEEEEEEccCCCEEEEEe-CC----CcEEEEECCcc--cc----ccceEEEEccCCCEEEEEecCCceecCeeEEEeec
Q psy7062          58 KNVVEVGFQEDGKWMFTGG-ED----CRARIWDLSLC--FI----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNS  126 (148)
Q Consensus        58 ~~i~~~~~sp~~~~l~~~~-~~----~~i~l~d~~~~--~~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~  126 (148)
                      -.+..+.++|||++++.+. .+    ..+++.|+.++  +.    ..-..++|++|++.|+.+..+........|+.+++
T Consensus       127 ~~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~~~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~l  206 (686)
T PRK10115        127 YTLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVEPSFVWANDSWTFYYVRKHPVTLLPYQVWRHTI  206 (686)
T ss_pred             EEEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCcceEEEEeeCCCEEEEEEecCCCCCCCEEEEEEC
Confidence            3467788999999776542 22    36888999877  22    21246899999987776665432113357888888


Q ss_pred             CCC
Q psy7062         127 CYP  129 (148)
Q Consensus       127 ~~~  129 (148)
                      -++
T Consensus       207 gt~  209 (686)
T PRK10115        207 GTP  209 (686)
T ss_pred             CCC
Confidence            776

>KOG4460|consensus

Probab=88.71  E-value=10  Score=29.85  Aligned_cols=69  Identities=13%  Similarity=0.072  Sum_probs=46.3

Q ss_pred             CEEEEEEccCCCEEEEEeCCCcEEEEECCcc------------------------cc----ccceEEEEccCC---CEEE
Q psy7062          59 NVVEVGFQEDGKWMFTGGEDCRARIWDLSLC------------------------FI----QQVNALRITPDK---QLLA  107 (148)
Q Consensus        59 ~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~------------------------~~----~~i~~~~~sp~~---~~l~  107 (148)
                      .|..+..++.|..++-.+.+|.+.++=.+..                        |.    --+..++|+|+.   ..|.
T Consensus       105 eV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL~  184 (741)
T KOG4460|consen  105 EVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHLV  184 (741)
T ss_pred             EEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceEE
Confidence            4677888999998888888886555442111                        11    234557899965   4555


Q ss_pred             EEecCCceecCeeEEEeecCCCccee
Q psy7062         108 SAEELSCCYCGAAVFVYNSCYPAAVV  133 (148)
Q Consensus       108 ~~~~d~~~~~~~~i~~~d~~~~~~~~  133 (148)
                      .-+.|.      .+++||+..++...
T Consensus       185 iL~sdn------viRiy~lS~~tely  204 (741)
T KOG4460|consen  185 LLTSDN------VIRIYSLSEPTELY  204 (741)
T ss_pred             EEecCc------EEEEEecCCcchhh
Confidence            555555      89999998776653

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=88.54  E-value=9.4  Score=29.24  Aligned_cols=92  Identities=12%  Similarity=0.125  Sum_probs=50.0

Q ss_pred             CeEEEEeCCCCCCCceEEecCCC--CCEEEEEEccC--CCE-EEEEeCCCcEEEEEC-Ccc---------cc--------
Q psy7062          35 QHIRMYDFGSNNPNPVINCEGVS--KNVVEVGFQED--GKW-MFTGGEDCRARIWDL-SLC---------FI--------   91 (148)
Q Consensus        35 ~~v~~~d~~~~~~~~~~~~~~~~--~~i~~~~~sp~--~~~-l~~~~~~~~i~l~d~-~~~---------~~--------   91 (148)
                      +++.+||++..  +.+.++.--.  .....+.|..+  ..+ ++.+...+.|..|-- ..+         +.        
T Consensus       222 ~~l~vWD~~~r--~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~  299 (461)
T PF05694_consen  222 HSLHVWDWSTR--KLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWI  299 (461)
T ss_dssp             -EEEEEETTTT--EEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS-
T ss_pred             CeEEEEECCCC--cEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCccc
Confidence            47999999998  7777765322  34566777544  443 344445555555533 222         00        


Q ss_pred             ------------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCccee
Q psy7062          92 ------------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVV  133 (148)
Q Consensus        92 ------------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~  133 (148)
                                  .-+..+..|.|.++|..++.     ..+.|+.||++.+..+.
T Consensus       300 lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W-----~~GdvrqYDISDP~~Pk  348 (461)
T PF05694_consen  300 LPEMLKPFGAVPPLITDILISLDDRFLYVSNW-----LHGDVRQYDISDPFNPK  348 (461)
T ss_dssp             --GGGGGG-EE------EEE-TTS-EEEEEET-----TTTEEEEEE-SSTTS-E
T ss_pred             ccccccccccCCCceEeEEEccCCCEEEEEcc-----cCCcEEEEecCCCCCCc
Confidence                        23577888999998888875     23489999999876544

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>KOG1916|consensus

Probab=88.53  E-value=1.4  Score=36.54  Aligned_cols=80  Identities=13%  Similarity=0.145  Sum_probs=52.1

Q ss_pred             CeEEEEeCCCCCCCceEE-----ecCCCCCEEEEEEcc---CCCEEEEEeCCCcEEEEECCcc-----------------
Q psy7062          35 QHIRMYDFGSNNPNPVIN-----CEGVSKNVVEVGFQE---DGKWMFTGGEDCRARIWDLSLC-----------------   89 (148)
Q Consensus        35 ~~v~~~d~~~~~~~~~~~-----~~~~~~~i~~~~~sp---~~~~l~~~~~~~~i~l~d~~~~-----------------   89 (148)
                      |.+.+||++.-.++.+..     .......+.-+.|+|   +..++..+..++++++..+...                 
T Consensus       153 g~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~~l~rsHs~~~~d~a~  232 (1283)
T KOG1916|consen  153 GELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLKGGEIRLLNINRALRSLFRSHSQRVTDMAF  232 (1283)
T ss_pred             hhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccCCCceeEeeechHHHHHHHhcCCCcccHHH
Confidence            578888886432233222     222345566777776   5567777888899998888654                 


Q ss_pred             cc-ccceEEEEccCCCEEEEEecCCc
Q psy7062          90 FI-QQVNALRITPDKQLLASAEELSC  114 (148)
Q Consensus        90 ~~-~~i~~~~~sp~~~~l~~~~~d~~  114 (148)
                      |. +-+.--..+|||..++.++.||.
T Consensus       233 ~~~g~~~l~~lSpDGtv~a~a~~dG~  258 (1283)
T KOG1916|consen  233 FAEGVLKLASLSPDGTVFAWAISDGS  258 (1283)
T ss_pred             HhhchhhheeeCCCCcEEEEeecCCc
Confidence            22 22222347999999999999993

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=88.28  E-value=8.2  Score=28.23  Aligned_cols=99  Identities=18%  Similarity=0.175  Sum_probs=55.1

Q ss_pred             cCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEec----CCCCCEEEEEEccC----CCEEEEEeCC-----
Q psy7062          12 FGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCE----GVSKNVVEVGFQED----GKWMFTGGED-----   78 (148)
Q Consensus        12 ~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~----~~~~~i~~~~~sp~----~~~l~~~~~~-----   78 (148)
                      ..+..++|.|+  +.++++ ...|.|++++........+....    ........++++|+    +...+..+..     
T Consensus         2 ~~P~~~a~~pd--G~l~v~-e~~G~i~~~~~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~   78 (331)
T PF07995_consen    2 NNPRSMAFLPD--GRLLVA-ERSGRIWVVDKDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGG   78 (331)
T ss_dssp             SSEEEEEEETT--SCEEEE-ETTTEEEEEETTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSS
T ss_pred             CCceEEEEeCC--CcEEEE-eCCceEEEEeCCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCC
Confidence            34678899998  889888 77999999993322001222221    23456899999994    4433333321     


Q ss_pred             ---CcEEEEECCcc----------cc---------ccceEEEEccCCCEEEEEecCC
Q psy7062          79 ---CRARIWDLSLC----------FI---------QQVNALRITPDKQLLASAEELS  113 (148)
Q Consensus        79 ---~~i~l~d~~~~----------~~---------~~i~~~~~sp~~~~l~~~~~d~  113 (148)
                         ..|.-|.....          +.         +....+.|.|||.+.++.+..+
T Consensus        79 ~~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~~  135 (331)
T PF07995_consen   79 DNDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDGG  135 (331)
T ss_dssp             SEEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-TT
T ss_pred             CcceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCCC
Confidence               12333322211          11         5567799999998766666544

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=88.12  E-value=7.1  Score=27.36  Aligned_cols=103  Identities=18%  Similarity=0.153  Sum_probs=62.0

Q ss_pred             cEEEEEeCCCCccEEEEEe---cCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEE-CCcc
Q psy7062          14 QISTVFDSKHLVEMVAALG---GYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWD-LSLC   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~---~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d-~~~~   89 (148)
                      ....+.+++  ++.++...   ....+.++.....   ......  ...+..-.|++++........+...+++. ...+
T Consensus        26 ~~s~AvS~d--g~~~A~v~~~~~~~~L~~~~~~~~---~~~~~~--g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g   98 (253)
T PF10647_consen   26 VTSPAVSPD--GSRVAAVSEGDGGRSLYVGPAGGP---VRPVLT--GGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASG   98 (253)
T ss_pred             ccceEECCC--CCeEEEEEEcCCCCEEEEEcCCCc---ceeecc--CCccccccccCCCCEEEEEcCCCceEEEEecCCC
Confidence            456677777  55554434   2235666555433   222222  33677789999988777766666666663 2222


Q ss_pred             ------cc-----ccceEEEEccCCCEEEEEecCCceecCeeEEEeec
Q psy7062          90 ------FI-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNS  126 (148)
Q Consensus        90 ------~~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~  126 (148)
                            ..     ..|..+.+||||..++....++   ...+|.+--+
T Consensus        99 ~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~---~~~~v~va~V  143 (253)
T PF10647_consen   99 TGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDG---GGGRVYVAGV  143 (253)
T ss_pred             cceeEEecccccCCceEEEEECCCCcEEEEEEecC---CCCeEEEEEE
Confidence                  11     3799999999999888877433   2335665543

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins

Probab=87.76  E-value=1.6  Score=19.35  Aligned_cols=25  Identities=16%  Similarity=0.334  Sum_probs=16.1

Q ss_pred             EEEEEEccCCCEEEEEeCCCcEEEE
Q psy7062          60 VVEVGFQEDGKWMFTGGEDCRARIW   84 (148)
Q Consensus        60 i~~~~~sp~~~~l~~~~~~~~i~l~   84 (148)
                      ..+++++++|..+++-+..+.|++|
T Consensus         4 P~gvav~~~g~i~VaD~~n~rV~vf   28 (28)
T PF01436_consen    4 PHGVAVDSDGNIYVADSGNHRVQVF   28 (28)
T ss_dssp             EEEEEEETTSEEEEEECCCTEEEEE
T ss_pred             CcEEEEeCCCCEEEEECCCCEEEEC
Confidence            4566677777766666666666554

For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=87.37  E-value=9.1  Score=28.38  Aligned_cols=53  Identities=9%  Similarity=0.084  Sum_probs=34.5

Q ss_pred             CCEEEEEEccCCCEEEEEeCC-------------------CcEEEEECCcc-cc------ccceEEEEccCCCEEEEEe
Q psy7062          58 KNVVEVGFQEDGKWMFTGGED-------------------CRARIWDLSLC-FI------QQVNALRITPDKQLLASAE  110 (148)
Q Consensus        58 ~~i~~~~~sp~~~~l~~~~~~-------------------~~i~l~d~~~~-~~------~~i~~~~~sp~~~~l~~~~  110 (148)
                      .....+.|.|||.+.++.+..                   +.+.-+|.... ++      ...+.++|+|+|+.+++-.
T Consensus       124 ~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~~pdg~~~e~~a~G~rnp~Gl~~d~~G~l~~tdn  202 (367)
T TIGR02604       124 HSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRYNPDGGKLRVVAHGFQNPYGHSVDSWGDVFFCDN  202 (367)
T ss_pred             ccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEEEEecCCCeEEEEecCcCCCccceECCCCCEEEEcc
Confidence            346789999999866654311                   34555555443 22      4467899999998876644

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=86.99  E-value=9.6  Score=28.77  Aligned_cols=36  Identities=25%  Similarity=0.257  Sum_probs=27.0

Q ss_pred             ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceec
Q psy7062          92 QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVA  134 (148)
Q Consensus        92 ~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~  134 (148)
                      +++.+++.| |--+++.|..+|      .+.+.|+|.+..+..
T Consensus        87 g~vtal~~S-~iGFvaigy~~G------~l~viD~RGPavI~~  122 (395)
T PF08596_consen   87 GPVTALKNS-DIGFVAIGYESG------SLVVIDLRGPAVIYN  122 (395)
T ss_dssp             -SEEEEEE--BTSEEEEEETTS------EEEEEETTTTEEEEE
T ss_pred             CcEeEEecC-CCcEEEEEecCC------cEEEEECCCCeEEee
Confidence            677777764 667888888877      999999997776543

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=86.93  E-value=8.5  Score=26.92  Aligned_cols=62  Identities=10%  Similarity=0.120  Sum_probs=43.2

Q ss_pred             CCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc
Q psy7062          23 HLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC   89 (148)
Q Consensus        23 ~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~   89 (148)
                      ..++.|+.|+++| +.+++.... .......  +...|..+...|+-+.++.-+ |+.+.++++...
T Consensus         5 ~~~~~L~vGt~~G-l~~~~~~~~-~~~~~i~--~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l   66 (275)
T PF00780_consen    5 SWGDRLLVGTEDG-LYVYDLSDP-SKPTRIL--KLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSL   66 (275)
T ss_pred             cCCCEEEEEECCC-EEEEEecCC-ccceeEe--ecceEEEEEEecccCEEEEEc-CCccEEEEchhh
Confidence            3477888888888 888888433 1233333  233399999999887766654 499999999765

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>PHA02713 hypothetical protein; Provisional

Probab=86.91  E-value=12  Score=29.50  Aligned_cols=102  Identities=13%  Similarity=0.094  Sum_probs=52.6

Q ss_pred             ccEEEEEecCC-----eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC---------------------
Q psy7062          25 VEMVAALGGYQ-----HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED---------------------   78 (148)
Q Consensus        25 ~~~l~~~~~d~-----~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~---------------------   78 (148)
                      +.+.+.|+.++     ++..||..+.....+..+.........+  .-+|+..+.|+.+                     
T Consensus       352 g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~~~~~~--~~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~  429 (557)
T PHA02713        352 DTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGMC--VLDQYIYIIGGRTEHIDYTSVHHMNSIDMEEDTH  429 (557)
T ss_pred             CEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcccccccEE--EECCEEEEEeCCCccccccccccccccccccccc
Confidence            55666666543     5888998876222222222111112122  2367777777654                     


Q ss_pred             --CcEEEEECCcc-------cc-ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062          79 --CRARIWDLSLC-------FI-QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        79 --~~i~l~d~~~~-------~~-~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                        ..+..||..+.       +. .+.......-+++..+.|+.++.......+..||..+
T Consensus       430 ~~~~ve~YDP~td~W~~v~~m~~~r~~~~~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~  489 (557)
T PHA02713        430 SSNKVIRYDTVNNIWETLPNFWTGTIRPGVVSHKDDIYVVCDIKDEKNVKTCIFRYNTNT  489 (557)
T ss_pred             ccceEEEECCCCCeEeecCCCCcccccCcEEEECCEEEEEeCCCCCCccceeEEEecCCC
Confidence              24777888765       11 2222222233677667776543111123467888886

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=86.84  E-value=9.1  Score=27.20  Aligned_cols=98  Identities=11%  Similarity=0.083  Sum_probs=56.0

Q ss_pred             ccEEEEEecCC--eEEEEeCCCCCCCceEEecCC-CCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc--ccc
Q psy7062          25 VEMVAALGGYQ--HIRMYDFGSNNPNPVINCEGV-SKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI--QQV   94 (148)
Q Consensus        25 ~~~l~~~~~d~--~v~~~d~~~~~~~~~~~~~~~-~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~--~~i   94 (148)
                      +.++-+.+..|  .++.+|++++  +.+....-. .-.=.++....|.-+.+ .=.++...+||..+.     |.  ..-
T Consensus        56 g~LyESTG~yG~S~l~~~d~~tg--~~~~~~~l~~~~FgEGit~~~d~l~qL-TWk~~~~f~yd~~tl~~~~~~~y~~EG  132 (264)
T PF05096_consen   56 GTLYESTGLYGQSSLRKVDLETG--KVLQSVPLPPRYFGEGITILGDKLYQL-TWKEGTGFVYDPNTLKKIGTFPYPGEG  132 (264)
T ss_dssp             TEEEEEECSTTEEEEEEEETTTS--SEEEEEE-TTT--EEEEEEETTEEEEE-ESSSSEEEEEETTTTEEEEEEE-SSS-
T ss_pred             CEEEEeCCCCCcEEEEEEECCCC--cEEEEEECCccccceeEEEECCEEEEE-EecCCeEEEEccccceEEEEEecCCcc
Confidence            56666656555  7999999998  555443321 22223444433322222 235788999999876     33  556


Q ss_pred             eEEEEccCCCEEEEEecCCceecCeeEEEeecCCCccee
Q psy7062          95 NALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVV  133 (148)
Q Consensus        95 ~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~  133 (148)
                      +.++  .+++.|+.+..      ..+++++|..+.+...
T Consensus       133 WGLt--~dg~~Li~SDG------S~~L~~~dP~~f~~~~  163 (264)
T PF05096_consen  133 WGLT--SDGKRLIMSDG------SSRLYFLDPETFKEVR  163 (264)
T ss_dssp             -EEE--ECSSCEEEE-S------SSEEEEE-TTT-SEEE
T ss_pred             eEEE--cCCCEEEEECC------ccceEEECCcccceEE
Confidence            6676  46777777654      3489999987665443

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=86.79  E-value=11  Score=28.13  Aligned_cols=107  Identities=12%  Similarity=0.177  Sum_probs=71.1

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeC---CCcEEEEECCcc--
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE---DCRARIWDLSLC--   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~---~~~i~l~d~~~~--   89 (148)
                      ...+.++.. .+..+....++.+.+.|..+.  ....... -......++++|+++.+..+..   ++++.+.|-.+.  
T Consensus        77 ~~i~v~~~~-~~vyv~~~~~~~v~vid~~~~--~~~~~~~-vG~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~  152 (381)
T COG3391          77 AGVAVNPAG-NKVYVTTGDSNTVSVIDTATN--TVLGSIP-VGLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKV  152 (381)
T ss_pred             cceeeCCCC-CeEEEecCCCCeEEEEcCccc--ceeeEee-eccCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeE
Confidence            445555552 334555455678999997776  4444433 2336778999999987766554   678888888876  


Q ss_pred             c---c--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 F---I--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 ~---~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                      .   .  .....++++|+|..+..+..+     .+.|.+.|.....
T Consensus       153 ~~~~~vG~~P~~~a~~p~g~~vyv~~~~-----~~~v~vi~~~~~~  193 (381)
T COG3391         153 TATIPVGNTPTGVAVDPDGNKVYVTNSD-----DNTVSVIDTSGNS  193 (381)
T ss_pred             EEEEecCCCcceEEECCCCCeEEEEecC-----CCeEEEEeCCCcc
Confidence            1   1  234889999999977777631     3378888865443

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=86.18  E-value=11  Score=27.39  Aligned_cols=88  Identities=17%  Similarity=0.148  Sum_probs=59.2

Q ss_pred             EEeCCCCccEEEEEecC------CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeC--------------
Q psy7062          18 VFDSKHLVEMVAALGGY------QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE--------------   77 (148)
Q Consensus        18 ~~~~~~~~~~l~~~~~d------~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~--------------   77 (148)
                      +|+++  |.+|+. +++      |.|=+||.+.+ -..+..+.+|.-..-.+.|.+||+.++.+.-              
T Consensus       120 vfs~d--G~~LYA-TEndfd~~rGViGvYd~r~~-fqrvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lN  195 (366)
T COG3490         120 VFSPD--GRLLYA-TENDFDPNRGVIGVYDAREG-FQRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELN  195 (366)
T ss_pred             ccCCC--CcEEEe-ecCCCCCCCceEEEEecccc-cceecccccCCcCcceeEEecCCcEEEEeCCceecccccCccccc
Confidence            34565  777777 443      36899999865 3667788888877778899999998877642              


Q ss_pred             ----CCcEEEEECCcc-------cc-----ccceEEEEccCCCEEEEE
Q psy7062          78 ----DCRARIWDLSLC-------FI-----QQVNALRITPDKQLLASA  109 (148)
Q Consensus        78 ----~~~i~l~d~~~~-------~~-----~~i~~~~~sp~~~~l~~~  109 (148)
                          ...+-+.|..++       +.     -.++.++..+||..++.+
T Consensus       196 ldsMePSlvlld~atG~liekh~Lp~~l~~lSiRHld~g~dgtvwfgc  243 (366)
T COG3490         196 LDSMEPSLVLLDAATGNLIEKHTLPASLRQLSIRHLDIGRDGTVWFGC  243 (366)
T ss_pred             hhhcCccEEEEeccccchhhhccCchhhhhcceeeeeeCCCCcEEEEE
Confidence                112444553333       11     567778888888766554

>KOG4441|consensus

Probab=85.98  E-value=16  Score=29.09  Aligned_cols=103  Identities=16%  Similarity=0.064  Sum_probs=62.7

Q ss_pred             ccEEEEEecCC-----eEEEEeCCCCCCCceEEecCCCCCEEEEEEc-cCCCEEEEEeCCC------cEEEEECCcc---
Q psy7062          25 VEMVAALGGYQ-----HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQ-EDGKWMFTGGEDC------RARIWDLSLC---   89 (148)
Q Consensus        25 ~~~l~~~~~d~-----~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~s-p~~~~l~~~~~~~------~i~l~d~~~~---   89 (148)
                      |.+.|+|+.|+     ++..||..+.....+..+.  . ...+.+.. -+|+..+.|+.++      .+..||..+.   
T Consensus       381 g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~--~-~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~  457 (571)
T KOG4441|consen  381 GKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPML--T-RRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETNTWT  457 (571)
T ss_pred             CEEEEEeccccccccccEEEecCCCCcccccCCCC--c-ceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCCcee
Confidence            67788888886     5889999887333333332  2 33344433 3788888887553      5778888776   


Q ss_pred             -cc----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          90 -FI----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        90 -~~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                       ..    .+...-.-.-++...+.|+.|+ -....+|..||..+.+.
T Consensus       458 ~~~~M~~~R~~~g~a~~~~~iYvvGG~~~-~~~~~~VE~ydp~~~~W  503 (571)
T KOG4441|consen  458 LIAPMNTRRSGFGVAVLNGKIYVVGGFDG-TSALSSVERYDPETNQW  503 (571)
T ss_pred             ecCCcccccccceEEEECCEEEEECCccC-CCccceEEEEcCCCCce
Confidence             11    1111112223788888888777 22234588898876543

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=85.97  E-value=13  Score=28.15  Aligned_cols=48  Identities=21%  Similarity=0.355  Sum_probs=35.5

Q ss_pred             eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECC
Q psy7062          36 HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLS   87 (148)
Q Consensus        36 ~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~   87 (148)
                      .|.+|+....   .+..+.-....+.++.|+.+.. |+....||.+++||+.
T Consensus        62 ~I~iys~sG~---ll~~i~w~~~~iv~~~wt~~e~-LvvV~~dG~v~vy~~~  109 (410)
T PF04841_consen   62 SIQIYSSSGK---LLSSIPWDSGRIVGMGWTDDEE-LVVVQSDGTVRVYDLF  109 (410)
T ss_pred             EEEEECCCCC---EeEEEEECCCCEEEEEECCCCe-EEEEEcCCEEEEEeCC
Confidence            5888888764   5555443337899999988655 5566689999999995

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>PHA02713 hypothetical protein; Provisional

Probab=85.97  E-value=7.9  Score=30.55  Aligned_cols=88  Identities=8%  Similarity=-0.099  Sum_probs=48.4

Q ss_pred             eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC------CcEEEEECCc-c-------cc---ccceEEE
Q psy7062          36 HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED------CRARIWDLSL-C-------FI---QQVNALR   98 (148)
Q Consensus        36 ~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~------~~i~l~d~~~-~-------~~---~~i~~~~   98 (148)
                      ++..||.++.....+..+.  ......-...-+++..+.|+.+      ..+..||..+ .       +.   .....+.
T Consensus       433 ~ve~YDP~td~W~~v~~m~--~~r~~~~~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~  510 (557)
T PHA02713        433 KVIRYDTVNNIWETLPNFW--TGTIRPGVVSHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTIL  510 (557)
T ss_pred             eEEEECCCCCeEeecCCCC--cccccCcEEEECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeEE
Confidence            5778888776323233322  1111111223356766666654      2467899987 4       11   1122222


Q ss_pred             EccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          99 ITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        99 ~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                        -+++..+.|+.++    ...+..||+.+.+.
T Consensus       511 --~~~~iyv~Gg~~~----~~~~e~yd~~~~~W  537 (557)
T PHA02713        511 --HDNTIMMLHCYES----YMLQDTFNVYTYEW  537 (557)
T ss_pred             --ECCEEEEEeeecc----eeehhhcCcccccc
Confidence              2888888888776    23677888876553

>KOG4499|consensus

Probab=85.93  E-value=4.4  Score=28.44  Aligned_cols=48  Identities=8%  Similarity=0.059  Sum_probs=38.3

Q ss_pred             EEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEcc
Q psy7062          16 STVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQE   67 (148)
Q Consensus        16 ~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp   67 (148)
                      ..+.|..  |++.++.-+.++|..+|..++  +.+.++.-.+..|++++|--
T Consensus       216 Gm~ID~e--G~L~Va~~ng~~V~~~dp~tG--K~L~eiklPt~qitsccFgG  263 (310)
T KOG4499|consen  216 GMTIDTE--GNLYVATFNGGTVQKVDPTTG--KILLEIKLPTPQITSCCFGG  263 (310)
T ss_pred             cceEccC--CcEEEEEecCcEEEEECCCCC--cEEEEEEcCCCceEEEEecC
Confidence            3444554  888888788889999999999  88888887788999999853

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=85.91  E-value=16  Score=29.14  Aligned_cols=72  Identities=13%  Similarity=0.180  Sum_probs=47.7

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC-CcEEEEECCc
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED-CRARIWDLSL   88 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~-~~i~l~d~~~   88 (148)
                      +..+.|+|.  ..+|++-.....-.++++.....+....+. ..+.|-+.+|.+||.-++.+-.. =..++||-..
T Consensus       115 pQGCVWHPk--~~iL~VLT~~dvSV~~sV~~d~srVkaDi~-~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~q  187 (671)
T PF15390_consen  115 PQGCVWHPK--KAILTVLTARDVSVLPSVHCDSSRVKADIK-TSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSAQ  187 (671)
T ss_pred             CCcccccCC--CceEEEEecCceeEeeeeeeCCceEEEecc-CCceEEEEEecCcCCEEEEEeCCeEEEEEecCch
Confidence            467889998  677777666555566677655324444453 56789999999999866555433 3455777643

>KOG4499|consensus

Probab=85.25  E-value=11  Score=26.60  Aligned_cols=95  Identities=9%  Similarity=0.069  Sum_probs=58.2

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeC--CCCCC---CceEEecC----CCCCEEEEEEccCCCEEEEEeCCCcEEEEE
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDF--GSNNP---NPVINCEG----VSKNVVEVGFQEDGKWMFTGGEDCRARIWD   85 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~--~~~~~---~~~~~~~~----~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d   85 (148)
                      +.++||.+. ..+.+.-+.+-+|.-||.  .++..   +.+..++.    .....-++++.-+|+..+++=..+++...|
T Consensus       161 Ngl~Wd~d~-K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~d  239 (310)
T KOG4499|consen  161 NGLAWDSDA-KKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVD  239 (310)
T ss_pred             ccccccccC-cEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEEC
Confidence            577788654 455555466668888884  44321   22222222    122233455566788877777788999999


Q ss_pred             CCcc-------cc-ccceEEEEc-cCCCEEEEEe
Q psy7062          86 LSLC-------FI-QQVNALRIT-PDKQLLASAE  110 (148)
Q Consensus        86 ~~~~-------~~-~~i~~~~~s-p~~~~l~~~~  110 (148)
                      ..++       +. .++.+.+|- |+-..+.+..
T Consensus       240 p~tGK~L~eiklPt~qitsccFgGkn~d~~yvT~  273 (310)
T KOG4499|consen  240 PTTGKILLEIKLPTPQITSCCFGGKNLDILYVTT  273 (310)
T ss_pred             CCCCcEEEEEEcCCCceEEEEecCCCccEEEEEe
Confidence            9988       22 778999985 3444444443

>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]

Probab=84.96  E-value=13  Score=28.81  Aligned_cols=99  Identities=9%  Similarity=0.047  Sum_probs=61.4

Q ss_pred             EEEEEecCCeEEEE-eCCCCCCCc---eEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----cc---ccce
Q psy7062          27 MVAALGGYQHIRMY-DFGSNNPNP---VINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----FI---QQVN   95 (148)
Q Consensus        27 ~l~~~~~d~~v~~~-d~~~~~~~~---~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----~~---~~i~   95 (148)
                      -|.+...||-+..| |++....+.   ++.++-....+..+.-..+.+.+++-+.+|++.++.....    ++   ..+.
T Consensus       282 SLLv~~~dG~vsQWFdvr~~~~p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL~~~~~~~~~  361 (733)
T COG4590         282 SLLVVHEDGLVSQWFDVRRDGQPHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLLFERAYQAPQ  361 (733)
T ss_pred             eEEEEcCCCceeeeeeeecCCCCcceeeeccccCcccceeeccccccceEEEEcCCCceeeeecccCcceehhhhhcCcc
Confidence            34455888888777 554331122   2333323344544433344567788888899988876554    22   6778


Q ss_pred             EEEEccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062          96 ALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV  132 (148)
Q Consensus        96 ~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~  132 (148)
                      .+++||.+.++++-..       ++++++.+.++.+.
T Consensus       362 ~~~~Sp~~~~Ll~e~~-------gki~~~~l~Nr~Pe  391 (733)
T COG4590         362 LVAMSPNQAYLLSEDQ-------GKIRLAQLENRNPE  391 (733)
T ss_pred             eeeeCcccchheeecC-------CceEEEEecCCCCC
Confidence            8899999988876543       25888777665543

>PF12768 Rax2: Cortical protein marker for cell polarity

Probab=84.83  E-value=12  Score=26.83  Aligned_cols=88  Identities=15%  Similarity=0.225  Sum_probs=54.6

Q ss_pred             eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEe------CCCcEEEEECCcc-c---c--------ccceEE
Q psy7062          36 HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGG------EDCRARIWDLSLC-F---I--------QQVNAL   97 (148)
Q Consensus        36 ~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~------~~~~i~l~d~~~~-~---~--------~~i~~~   97 (148)
                      .+.+||..+.  +-...-.+-.+.|..+.|..+.+.++.|.      ....+-.||+.+. +   .        .++..+
T Consensus        17 ~lC~yd~~~~--qW~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w~~~~~~~s~~ipgpv~a~   94 (281)
T PF12768_consen   17 GLCLYDTDNS--QWSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTWSSLGGGSSNSIPGPVTAL   94 (281)
T ss_pred             EEEEEECCCC--EeecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCeeeecCCcccccCCCcEEEE
Confidence            6889999876  43333334567899999987777777775      2346778998877 2   1        456666


Q ss_pred             EEcc-CCCEEEEEecCCceecCeeEEEeecC
Q psy7062          98 RITP-DKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        98 ~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                      .+.. ++..+..++.-  ..+...|..||-.
T Consensus        95 ~~~~~d~~~~~~aG~~--~~g~~~l~~~dGs  123 (281)
T PF12768_consen   95 TFISNDGSNFWVAGRS--ANGSTFLMKYDGS  123 (281)
T ss_pred             EeeccCCceEEEecee--cCCCceEEEEcCC
Confidence            6643 55444433321  1234567788733

>KOG3630|consensus

Probab=84.80  E-value=6.8  Score=33.52  Aligned_cols=89  Identities=9%  Similarity=0.015  Sum_probs=57.5

Q ss_pred             ecCCeEEEEeCCCCCCCc---eEEecCC------CCCEEEEEEccCCC-EEEEEeCCCcEEEEECCcc------cc--cc
Q psy7062          32 GGYQHIRMYDFGSNNPNP---VINCEGV------SKNVVEVGFQEDGK-WMFTGGEDCRARIWDLSLC------FI--QQ   93 (148)
Q Consensus        32 ~~d~~v~~~d~~~~~~~~---~~~~~~~------~~~i~~~~~sp~~~-~l~~~~~~~~i~l~d~~~~------~~--~~   93 (148)
                      +++..|..||++.-....   -..+..|      .....++.|+|.-- ..+.+..|..|++..+.-.      +.  ..
T Consensus       121 sng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~V~~~~~~~~~v~s~p~t~~  200 (1405)
T KOG3630|consen  121 SNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLRVKSTKQLAQNVTSFPVTNS  200 (1405)
T ss_pred             cCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchhhhhhhhhhhhhcccCcccc
Confidence            343478889997542111   1111111      23456778888644 4566677888888777544      22  67


Q ss_pred             ceEEEEccCCCEEEEEecCCceecCeeEEEeec
Q psy7062          94 VNALRITPDKQLLASAEELSCCYCGAAVFVYNS  126 (148)
Q Consensus        94 i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~  126 (148)
                      ..+++|+|.|++++.|-..|      ++.-|..
T Consensus       201 ~Tav~WSprGKQl~iG~nnG------t~vQy~P  227 (1405)
T KOG3630|consen  201 QTAVLWSPRGKQLFIGRNNG------TEVQYEP  227 (1405)
T ss_pred             eeeEEeccccceeeEecCCC------eEEEeec
Confidence            89999999999999998877      6665553

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=84.06  E-value=14  Score=29.09  Aligned_cols=53  Identities=6%  Similarity=0.152  Sum_probs=41.1

Q ss_pred             CCCEEEEEeCCCcEEEEECCcc-----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          68 DGKWMFTGGEDCRARIWDLSLC-----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        68 ~~~~l~~~~~~~~i~l~d~~~~-----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                      ..-+++.++..|-|++||--..     ++   ..|-.+..+.+|.++++.+.       ..+.+.|++
T Consensus       572 esGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk-------~yllL~d~~  632 (776)
T COG5167         572 ESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCK-------NYLLLTDVP  632 (776)
T ss_pred             cCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeec-------ceEEEEecc
Confidence            3458999999999999997543     33   77888999999999888875       147777755

>COG5276 Uncharacterized conserved protein [Function unknown]

Probab=83.95  E-value=14  Score=26.90  Aligned_cols=104  Identities=15%  Similarity=0.130  Sum_probs=63.8

Q ss_pred             eCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----cc----
Q psy7062          20 DSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----FI----   91 (148)
Q Consensus        20 ~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----~~----   91 (148)
                      |..-.+++...+..+.-++++|+.++....+..+.....-.  -.|.-.|++...+.++.-+-+.|+.+.    +.    
T Consensus        91 Dv~vse~yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gya--ygv~vsGn~aYVadlddgfLivdvsdpssP~lagrya  168 (370)
T COG5276          91 DVRVSEEYVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYA--YGVYVSGNYAYVADLDDGFLIVDVSDPSSPQLAGRYA  168 (370)
T ss_pred             eeEecccEEEEEcCCCceEEEeccCCCCcceeccccCCceE--EEEEecCCEEEEeeccCcEEEEECCCCCCceeeeeec
Confidence            33344677777677778999999987322333222222222  344557999999998888889999766    22    


Q ss_pred             ---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCccee
Q psy7062          92 ---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVV  133 (148)
Q Consensus        92 ---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~  133 (148)
                         ...+.++.  .|++-..+..|+      =+.+.|+.++..+.
T Consensus       169 ~~~~d~~~v~I--SGn~AYvA~~d~------GL~ivDVSnp~sPv  205 (370)
T COG5276         169 LPGGDTHDVAI--SGNYAYVAWRDG------GLTIVDVSNPHSPV  205 (370)
T ss_pred             cCCCCceeEEE--ecCeEEEEEeCC------CeEEEEccCCCCCe
Confidence               22345555  344444454544      47788887776554

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=82.94  E-value=7.2  Score=29.83  Aligned_cols=54  Identities=11%  Similarity=0.216  Sum_probs=30.6

Q ss_pred             CCCEEEEEEccCCCEEEEEeC-CCcEEEEECCcc----cc-----------------------ccceEEEEccCCCEEEE
Q psy7062          57 SKNVVEVGFQEDGKWMFTGGE-DCRARIWDLSLC----FI-----------------------QQVNALRITPDKQLLAS  108 (148)
Q Consensus        57 ~~~i~~~~~sp~~~~l~~~~~-~~~i~l~d~~~~----~~-----------------------~~i~~~~~sp~~~~l~~  108 (148)
                      ..-|+.|.+|.|.++|...++ .|.++.||+...    +.                       +..+-+..|-||+.|..
T Consensus       311 P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPqMvqlS~DGkRlYv  390 (461)
T PF05694_consen  311 PPLITDILISLDDRFLYVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQMVQLSLDGKRLYV  390 (461)
T ss_dssp             ------EEE-TTS-EEEEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S----EEE-TTSSEEEE
T ss_pred             CCceEeEEEccCCCEEEEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCCCeEEEccCCeEEEE
Confidence            355899999999999988777 689999999776    11                       22366777888887666


Q ss_pred             Ee
Q psy7062         109 AE  110 (148)
Q Consensus       109 ~~  110 (148)
                      ++
T Consensus       391 Tn  392 (461)
T PF05694_consen  391 TN  392 (461)
T ss_dssp             E-
T ss_pred             Ee
Confidence            54

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4

Probab=82.32  E-value=5.7  Score=23.22  Aligned_cols=40  Identities=10%  Similarity=0.091  Sum_probs=21.8

Q ss_pred             cCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEE
Q psy7062          33 GYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTG   75 (148)
Q Consensus        33 ~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~   75 (148)
                      .+|.+..||..++  +....+. -=...+++++++|+..++.+
T Consensus        35 ~~GRll~ydp~t~--~~~vl~~-~L~fpNGVals~d~~~vlv~   74 (89)
T PF03088_consen   35 PTGRLLRYDPSTK--ETTVLLD-GLYFPNGVALSPDESFVLVA   74 (89)
T ss_dssp             --EEEEEEETTTT--EEEEEEE-EESSEEEEEE-TTSSEEEEE
T ss_pred             CCcCEEEEECCCC--eEEEehh-CCCccCeEEEcCCCCEEEEE
Confidence            3456777777776  3222222 23356777888888766554

3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.

>PHA03098 kelch-like protein; Provisional

Probab=82.22  E-value=22  Score=27.74  Aligned_cols=103  Identities=13%  Similarity=-0.016  Sum_probs=50.5

Q ss_pred             ccEEEEEecCC------eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC-----CcEEEEECCcc----
Q psy7062          25 VEMVAALGGYQ------HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED-----CRARIWDLSLC----   89 (148)
Q Consensus        25 ~~~l~~~~~d~------~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~-----~~i~l~d~~~~----   89 (148)
                      +.+++.|+.++      .+..||..+.....+..+........  ...-+++.++.|+.+     ..+..||..+.    
T Consensus       295 ~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~R~~~~--~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~  372 (534)
T PHA03098        295 NVIYFIGGMNKNNLSVNSVVSYDTKTKSWNKVPELIYPRKNPG--VTVFNNRIYVIGGIYNSISLNTVESWKPGESKWRE  372 (534)
T ss_pred             CEEEEECCCcCCCCeeccEEEEeCCCCeeeECCCCCcccccce--EEEECCEEEEEeCCCCCEecceEEEEcCCCCceee
Confidence            45566655432      57778887762111111111111222  223367777777765     34777888765    


Q ss_pred             ---cc-ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          90 ---FI-QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        90 ---~~-~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                         +. .+.......-+++..+.|+.+........+..||+.+.
T Consensus       373 ~~~lp~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~  416 (534)
T PHA03098        373 EPPLIFPRYNPCVVNVNNLIYVIGGISKNDELLKTVECFSLNTN  416 (534)
T ss_pred             CCCcCcCCccceEEEECCEEEEECCcCCCCcccceEEEEeCCCC
Confidence               11 11111122236676676664321111246788887654

>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4

Probab=81.93  E-value=8  Score=22.58  Aligned_cols=35  Identities=23%  Similarity=0.231  Sum_probs=24.8

Q ss_pred             CCCcEEEEECCcc----c-c--ccceEEEEccCCCEEEEEec
Q psy7062          77 EDCRARIWDLSLC----F-I--QQVNALRITPDKQLLASAEE  111 (148)
Q Consensus        77 ~~~~i~l~d~~~~----~-~--~~i~~~~~sp~~~~l~~~~~  111 (148)
                      .+|.+.-||..+.    + .  .-.+.+++++|+.+++.+-.
T Consensus        35 ~~GRll~ydp~t~~~~vl~~~L~fpNGVals~d~~~vlv~Et   76 (89)
T PF03088_consen   35 PTGRLLRYDPSTKETTVLLDGLYFPNGVALSPDESFVLVAET   76 (89)
T ss_dssp             --EEEEEEETTTTEEEEEEEEESSEEEEEE-TTSSEEEEEEG
T ss_pred             CCcCEEEEECCCCeEEEehhCCCccCeEEEcCCCCEEEEEec
Confidence            4567888888877    2 2  66788999999998888764

3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=81.78  E-value=18  Score=26.38  Aligned_cols=40  Identities=20%  Similarity=0.224  Sum_probs=29.2

Q ss_pred             CceEEecCCCCCEEEEEEccCCCEEEEEe-CCCcEEEEECC
Q psy7062          48 NPVINCEGVSKNVVEVGFQEDGKWMFTGG-EDCRARIWDLS   87 (148)
Q Consensus        48 ~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-~~~~i~l~d~~   87 (148)
                      ..++....+-...++++||||++.++... ..+.++-|++.
T Consensus       153 ~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d  193 (307)
T COG3386         153 GVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRYDLD  193 (307)
T ss_pred             CEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEEecC
Confidence            45555555566678999999998776654 45888888886

>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []

Probab=81.63  E-value=29  Score=28.72  Aligned_cols=107  Identities=7%  Similarity=0.144  Sum_probs=68.8

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCC---ceEEecCC----------CCCEEEEEEccCCCEEEEEeCCC
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPN---PVINCEGV----------SKNVVEVGFQEDGKWMFTGGEDC   79 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~---~~~~~~~~----------~~~i~~~~~sp~~~~l~~~~~~~   79 (148)
                      .+..++|+|...+++ |.....|...+|++...+..   .......+          ......+.|.++-..++.++.. 
T Consensus       147 ~~aDv~FnP~~~~q~-AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~~r~-  224 (765)
T PF10214_consen  147 PHADVAFNPWDQRQF-AIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVCNRS-  224 (765)
T ss_pred             ccceEEeccCccceE-EEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEEcCC-
Confidence            467899998765655 55599999999999221101   11111111          1334577888887777777644 


Q ss_pred             cEEEEECCcc-----cc-----ccceEEEEccC--CCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          80 RARIWDLSLC-----FI-----QQVNALRITPD--KQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        80 ~i~l~d~~~~-----~~-----~~i~~~~~sp~--~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                      .+.++|+++.     +.     .+|..+.-+|.  ...++.++.        .|...|+...
T Consensus       225 ~l~~~d~~~~~~~~~l~~~~~~~~IlDv~~~~~~~~~~FiLTs~--------eiiw~~~~~~  278 (765)
T PF10214_consen  225 KLMLIDFESNWQTEYLVTAKTWSWILDVKRSPDNPSHVFILTSK--------EIIWLDVKSS  278 (765)
T ss_pred             ceEEEECCCCCccchhccCCChhheeeEEecCCccceEEEEecC--------eEEEEEccCC
Confidence            6888899876     11     77888888876  455555554        6777787763

These proteins are found in fungi.

>PRK10115 protease 2; Provisional

Probab=81.14  E-value=28  Score=28.36  Aligned_cols=100  Identities=7%  Similarity=0.038  Sum_probs=56.7

Q ss_pred             EEEeCCCCccEEEEEecCC-----eEEEEeCCCCCCCceE-EecCCCCCEEEEEEccCCCEEEEEeCC------CcEEEE
Q psy7062          17 TVFDSKHLVEMVAALGGYQ-----HIRMYDFGSNNPNPVI-NCEGVSKNVVEVGFQEDGKWMFTGGED------CRARIW   84 (148)
Q Consensus        17 ~~~~~~~~~~~l~~~~~d~-----~v~~~d~~~~~~~~~~-~~~~~~~~i~~~~~sp~~~~l~~~~~~------~~i~l~   84 (148)
                      +.++|+  +++|+.+.+.+     .+.+.|+.++  ..+. .+. ...  ..++|.+|++.++....+      ..++.+
T Consensus       132 ~~~Spd--g~~la~~~d~~G~E~~~l~v~d~~tg--~~l~~~i~-~~~--~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h  204 (686)
T PRK10115        132 MAITPD--NTIMALAEDFLSRRQYGIRFRNLETG--NWYPELLD-NVE--PSFVWANDSWTFYYVRKHPVTLLPYQVWRH  204 (686)
T ss_pred             EEECCC--CCEEEEEecCCCcEEEEEEEEECCCC--CCCCcccc-Ccc--eEEEEeeCCCEEEEEEecCCCCCCCEEEEE
Confidence            344455  77777643332     5888899877  4322 222 111  568999999866554432      357778


Q ss_pred             ECCcc-------cc---ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeec
Q psy7062          85 DLSLC-------FI---QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNS  126 (148)
Q Consensus        85 d~~~~-------~~---~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~  126 (148)
                      ++.+.       +.   ....-..+.+ ++++++..+..+   ....+.+++.
T Consensus       205 ~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~---~~~~~~l~~~  254 (686)
T PRK10115        205 TIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASA---TTSEVLLLDA  254 (686)
T ss_pred             ECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECC---ccccEEEEEC
Confidence            88766       22   2222223334 788766555433   2335777774

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=80.53  E-value=21  Score=26.47  Aligned_cols=96  Identities=16%  Similarity=0.074  Sum_probs=54.9

Q ss_pred             ecCcEEEEEeCCCCccEEEEEe-----------cCC-eEEEEeCCCCCCC--ceEEecCCCCCEEEEEEccCCCEEEEEe
Q psy7062          11 AFGQISTVFDSKHLVEMVAALG-----------GYQ-HIRMYDFGSNNPN--PVINCEGVSKNVVEVGFQEDGKWMFTGG   76 (148)
Q Consensus        11 ~~~~~~~~~~~~~~~~~l~~~~-----------~d~-~v~~~d~~~~~~~--~~~~~~~~~~~i~~~~~sp~~~~l~~~~   76 (148)
                      +..+..++|+++  |+++++-.           ..+ .|.+++-..+..+  ....+...-....++++.++| .++ ++
T Consensus        13 ~~~P~~ia~d~~--G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G-lyV-~~   88 (367)
T TIGR02604        13 LRNPIAVCFDER--GRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG-VYV-AT   88 (367)
T ss_pred             cCCCceeeECCC--CCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC-EEE-eC
Confidence            456788899988  88887732           112 6666654322112  233443334456888999988 444 44


Q ss_pred             CCCcEEEEECCc------c-------cc-------ccceEEEEccCCCEEEEEe
Q psy7062          77 EDCRARIWDLSL------C-------FI-------QQVNALRITPDKQLLASAE  110 (148)
Q Consensus        77 ~~~~i~l~d~~~------~-------~~-------~~i~~~~~sp~~~~l~~~~  110 (148)
                      .....++.|...      .       +.       .....+.|.|||.+.++-+
T Consensus        89 ~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G  142 (367)
T TIGR02604        89 PPDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHG  142 (367)
T ss_pred             CCeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecc
Confidence            443333445422      1       11       2266789999998766554

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=80.34  E-value=31  Score=28.31  Aligned_cols=105  Identities=7%  Similarity=0.098  Sum_probs=66.6

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCC------------------CCCceEEecCCCCCEEEEEEc--cCCCEEEE
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSN------------------NPNPVINCEGVSKNVVEVGFQ--EDGKWMFT   74 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~------------------~~~~~~~~~~~~~~i~~~~~s--p~~~~l~~   74 (148)
                      +-....--...+.|+.+.+||.|.+|.+++-                  ..++...+. ......+++++  ...++++.
T Consensus       104 N~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~~~~~rlIAV  182 (717)
T PF08728_consen  104 NFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHDYKKSRLIAV  182 (717)
T ss_pred             eEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEecCcceEEEE
Confidence            3334444445788999899999999976310                  001112222 24567899998  77788899


Q ss_pred             EeCCCcEEEEECCc--c-------cc--ccceEEEEccCC-----C-EEEEEecCCceecCeeEEEeec
Q psy7062          75 GGEDCRARIWDLSL--C-------FI--QQVNALRITPDK-----Q-LLASAEELSCCYCGAAVFVYNS  126 (148)
Q Consensus        75 ~~~~~~i~l~d~~~--~-------~~--~~i~~~~~sp~~-----~-~l~~~~~d~~~~~~~~i~~~d~  126 (148)
                      +++...|-+|-...  .       ..  +.|.++.|-++.     . ++++++=.|      .+.+|++
T Consensus       183 SsNs~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G------~v~~~~I  245 (717)
T PF08728_consen  183 SSNSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISG------EVWTFKI  245 (717)
T ss_pred             ecCCceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccC------cEEEEEE
Confidence            88888777665433  1       11  789999997632     2 566666545      5666665

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=80.33  E-value=20  Score=26.08  Aligned_cols=66  Identities=14%  Similarity=0.253  Sum_probs=39.5

Q ss_pred             ecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----cc----ccceEEEEccCCCEEEEEecCCceecCeeEEEe
Q psy7062          53 CEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----FI----QQVNALRITPDKQLLASAEELSCCYCGAAVFVY  124 (148)
Q Consensus        53 ~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----~~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~  124 (148)
                      .......+..+.-++||++++.+.......-||--..    ..    .++.++.|.|++...+.+ +.+      .|++-
T Consensus       140 ~~~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg------~~~~s  212 (302)
T PF14870_consen  140 VSETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGG------QIQFS  212 (302)
T ss_dssp             E-S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEE-TTT------EEEEE
T ss_pred             ccCCcceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEe-CCc------EEEEc
Confidence            3334566888888999999998887777778887543    11    889999999998876655 544      56555


Q ss_pred             e
Q psy7062         125 N  125 (148)
Q Consensus       125 d  125 (148)
                      +
T Consensus       213 ~  213 (302)
T PF14870_consen  213 D  213 (302)
T ss_dssp             E
T ss_pred             c
Confidence            5

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	148
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	99.86
3ow8_A	321	WD repeat-containing protein 61; structural genomi	99.86
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	99.86
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	99.85
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	99.85
3ow8_A	321	WD repeat-containing protein 61; structural genomi	99.85
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	99.84
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	99.84
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	99.84
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	99.83
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	99.83
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	99.83
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	99.82
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	99.82
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	99.82
2pm7_B	297	Protein transport protein SEC13, protein transport	99.82
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	99.81
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	99.81
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	99.81
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	99.81
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	99.81
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	99.8
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	99.8
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	99.8
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	99.8
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	99.8
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	99.8
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	99.79
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	99.79
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	99.79
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	99.79
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	99.79
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	99.79
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	99.79
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	99.79
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	99.79
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	99.78
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	99.78
2pm7_B	297	Protein transport protein SEC13, protein transport	99.78
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	99.78
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.78
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	99.78
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	99.77
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	99.77
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	99.77
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	99.77
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	99.76
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	99.76
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	99.76
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	99.75
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	99.75
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	99.75
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	99.75
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	99.75
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	99.75
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	99.74
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	99.74
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	99.74
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	99.74
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	99.74
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	99.73
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	99.73
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	99.73
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	99.73
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	99.73
3jrp_A	379	Fusion protein of protein transport protein SEC13	99.73
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	99.73
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	99.73
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	99.72
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	99.72
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	99.72
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	99.72
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	99.72
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	99.72
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	99.72
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	99.72
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	99.72
3jrp_A	379	Fusion protein of protein transport protein SEC13	99.72
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	99.71
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	99.71
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	99.71
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	99.71
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	99.71
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	99.71
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	99.71
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	99.7
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	99.7
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	99.7
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	99.7
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	99.7
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.69
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	99.69
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	99.69
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	99.69
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	99.69
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	99.69
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	99.69
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	99.68
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	99.68
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	99.68
3jro_A	753	Fusion protein of protein transport protein SEC13	99.68
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	99.68
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	99.68
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	99.68
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	99.67
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	99.67
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	99.67
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	99.65
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	99.65
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	99.65
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	99.65
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	99.64
3jro_A	753	Fusion protein of protein transport protein SEC13	99.64
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	99.64
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	99.63
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	99.63
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	99.63
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	99.62
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	99.6
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	99.58
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	99.58
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.55
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.54
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	99.54
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.53
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.52
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.49
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.48
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.44
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.42
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.38
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.31
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.3
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.25
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.25
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.25
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.25
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.25
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.24
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.24
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.23
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.23
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.22
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.21
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.2
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.2
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.2
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.18
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.18
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.17
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.16
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.15
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.15
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.14
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.12
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.12
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.1
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.09
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.09
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.07
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.06
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	98.99
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	98.98
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	98.95
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	98.92
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	98.87
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	98.84
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	98.84
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	98.82
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	98.78
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	98.76
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	98.74
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	98.74
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	98.72
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	98.71
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	98.66
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	98.64
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	98.61
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	98.6
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	98.6
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	98.57
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	98.57
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	98.56
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	98.54
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	98.53
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	98.51
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	98.5
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	98.49
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	98.44
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	98.42
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	98.4
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	98.39
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	98.36
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	98.36
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	98.34
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	98.31
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	98.3
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	98.29
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	98.28
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	98.26
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	98.17
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	98.16
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	98.16
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	98.13
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	98.13
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	98.13
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	98.1
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	98.1
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	98.08
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	98.01
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	97.96
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	97.95
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	97.95
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	97.94
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	97.92
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	97.88
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	97.87
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	97.82
2ece_A	462	462AA long hypothetical selenium-binding protein;	97.79
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	97.78
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	97.74
2qe8_A	343	Uncharacterized protein; structural genomics, join	97.73
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	97.73
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	97.64
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	97.6
2qe8_A	343	Uncharacterized protein; structural genomics, join	97.56
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	97.56
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	97.55
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	97.54
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	97.54
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	97.44
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	97.44
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	97.43
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	97.38
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	97.33
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	97.26
2ece_A	462	462AA long hypothetical selenium-binding protein;	97.19
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	97.09
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	97.09
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	97.05
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	97.04
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	97.04
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	96.95
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	96.94
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	96.85
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	96.78
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	96.77
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	96.7
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	96.68
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	96.64
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	96.54
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	96.5
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	96.49
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	96.42
3v65_B	386	Low-density lipoprotein receptor-related protein;	96.42
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	96.3
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	96.26
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	96.21
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	96.19
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	96.14
2p4o_A	306	Hypothetical protein; putative lactonase, structur	96.14
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	95.91
3v65_B	386	Low-density lipoprotein receptor-related protein;	95.82
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	95.68
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	95.56
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	95.54
3kya_A	496	Putative phosphatase; structural genomics, joint c	95.52
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	95.51
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	95.51
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	95.4
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	95.32
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	95.26
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	95.16
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	95.15
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	95.14
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	95.04
2p4o_A	306	Hypothetical protein; putative lactonase, structur	94.99
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	94.95
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	94.77
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	94.69
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	94.61
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	94.22
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	94.2
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	94.19
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	94.0
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	93.96
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	93.91
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	93.88
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	93.78
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	93.74
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	93.73
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	93.16
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	92.45
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	92.22
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	92.2
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	92.12
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	92.07
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	91.76
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	91.03
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	90.72
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	90.62
3sbq_A	638	Nitrous-oxide reductase; beta-propeller, cupredoxi	90.08
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	89.77
4a2l_A	795	BT_4663, two-component system sensor histidine kin	89.68
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	89.67
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	89.13
3kya_A	496	Putative phosphatase; structural genomics, joint c	88.68
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	87.42
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	87.03
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	86.8
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	86.49
4a9v_A	592	PHOX; hydrolase, beta-propeller; 1.10A {Pseudomona	86.26
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	86.06
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	86.0
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	85.95
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	85.67
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	85.24
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	85.09
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	83.74
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	82.49
4a2l_A	795	BT_4663, two-component system sensor histidine kin	82.3
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	81.57

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=99.86  E-value=1.4e-20  Score=132.33  Aligned_cols=107  Identities=15%  Similarity=0.230  Sum_probs=98.3

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..+++|+|+  +++|++++.|++|++||++++  ..+..+..|...+.+++|+|+++++++++.|+++++||++++    
T Consensus        16 V~~~~fsp~--~~~l~s~~~dg~v~lWd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~   91 (304)
T 2ynn_A           16 VKGIDFHPT--EPWVLTTLYSGRVELWNYETQ--VEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVV   91 (304)
T ss_dssp             EEEEEECSS--SSEEEEEETTSEEEEEETTTT--EEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEE
T ss_pred             eEEEEECCC--CCEEEEEcCCCcEEEEECCCC--ceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEE
Confidence            578888888  899999999999999999988  788899999999999999999999999999999999999887    


Q ss_pred             -cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 -FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 -~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                       +.   ..+.+++|+|++++|++++.|+      +|++||+++..
T Consensus        92 ~~~~h~~~v~~~~~~~~~~~l~sgs~D~------~v~lWd~~~~~  130 (304)
T 2ynn_A           92 DFEAHPDYIRSIAVHPTKPYVLSGSDDL------TVKLWNWENNW  130 (304)
T ss_dssp             EEECCSSCEEEEEECSSSSEEEEEETTS------CEEEEEGGGTT
T ss_pred             EEeCCCCcEEEEEEcCCCCEEEEECCCC------eEEEEECCCCc
Confidence             33   7799999999999999999999      99999998653

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=99.86  E-value=1.7e-20  Score=133.08  Aligned_cols=113  Identities=17%  Similarity=0.227  Sum_probs=101.3

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..+++|+|+  +++|++++.|+.|++||++++  +.+..+.+|...|.+++|+|+++++++++.|+.+++||++..    
T Consensus       167 v~~~~~spd--g~~lasg~~dg~i~iwd~~~~--~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~  242 (321)
T 3ow8_A          167 ILSIAYSPD--GKYLASGAIDGIINIFDIATG--KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAG  242 (321)
T ss_dssp             EEEEEECTT--SSEEEEEETTSCEEEEETTTT--EEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEE
T ss_pred             EEEEEECCC--CCEEEEEcCCCeEEEEECCCC--cEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeE
Confidence            356778887  899999999999999999998  888899999999999999999999999999999999999876    


Q ss_pred             -cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062          90 -FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN  136 (148)
Q Consensus        90 -~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~  136 (148)
                       +.   ..+.+++|+|++++|++++.|+      +|++||+.+.+.+..+.
T Consensus       243 ~~~~h~~~v~~~~~sp~~~~l~s~s~D~------~v~iwd~~~~~~~~~~~  287 (321)
T 3ow8_A          243 TLSGHASWVLNVAFCPDDTHFVSSSSDK------SVKVWDVGTRTCVHTFF  287 (321)
T ss_dssp             EECCCSSCEEEEEECTTSSEEEEEETTS------CEEEEETTTTEEEEEEC
T ss_pred             EEcCCCCceEEEEECCCCCEEEEEeCCC------cEEEEeCCCCEEEEEEc
Confidence             22   6799999999999999999988      99999999877665543

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=99.86  E-value=4.6e-20  Score=129.62  Aligned_cols=109  Identities=15%  Similarity=0.271  Sum_probs=97.5

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..+++|.++  +++|++|+.|++|++||++++  +.+..+.+|...|.+++|+|+++++++++.|+++++||+++.    
T Consensus        58 v~~~~~~~~--~~~l~s~s~d~~i~vwd~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~  133 (304)
T 2ynn_A           58 VRAGKFIAR--KNWIIVGSDDFRIRVFNYNTG--EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALE  133 (304)
T ss_dssp             EEEEEEEGG--GTEEEEEETTSEEEEEETTTC--CEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEE
T ss_pred             EEEEEEeCC--CCEEEEECCCCEEEEEECCCC--cEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchh
Confidence            356778887  899999999999999999998  888999999999999999999999999999999999999875    


Q ss_pred             --cc---ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062          90 --FI---QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNSCYPAAV  132 (148)
Q Consensus        90 --~~---~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~  132 (148)
                        +.   ..+.+++|+| ++..|++++.|+      +|++||++.....
T Consensus       134 ~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~------~v~iwd~~~~~~~  176 (304)
T 2ynn_A          134 QTFEGHEHFVMCVAFNPKDPSTFASGCLDR------TVKVWSLGQSTPN  176 (304)
T ss_dssp             EEECCCCSCEEEEEECTTCTTEEEEEETTS------EEEEEETTCSSCS
T ss_pred             hhhcccCCcEEEEEECCCCCCEEEEEeCCC------eEEEEECCCCCcc
Confidence              22   7799999999 678999999998      9999999765543

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=99.85  E-value=4.3e-20  Score=134.83  Aligned_cols=112  Identities=15%  Similarity=0.311  Sum_probs=100.8

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..+++|+|+  +.+|++|+.|++|++||+.++  +.+..+.+|...|.+++|+|+++++++++.|+++++||+.+.    
T Consensus       111 V~~~~~~p~--~~~l~s~s~Dg~i~vwd~~~~--~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~  186 (410)
T 1vyh_C          111 VTRVIFHPV--FSVMVSASEDATIKVWDYETG--DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIR  186 (410)
T ss_dssp             EEEEEECSS--SSEEEEEESSSCEEEEETTTC--CCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEE
T ss_pred             EEEEEEcCC--CCEEEEEeCCCeEEEEECCCC--cEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeE
Confidence            467888887  889999999999999999998  888999999999999999999999999999999999999876    


Q ss_pred             -cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          90 -FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        90 -~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                       +.   ..+.+++|+|++++|++++.|+      +|++||+++......+
T Consensus       187 ~~~~h~~~V~~v~~~p~~~~l~s~s~D~------~i~~wd~~~~~~~~~~  230 (410)
T 1vyh_C          187 TMHGHDHNVSSVSIMPNGDHIVSASRDK------TIKMWEVQTGYCVKTF  230 (410)
T ss_dssp             CCCCCSSCEEEEEECSSSSEEEEEETTS------EEEEEETTTCCEEEEE
T ss_pred             EEcCCCCCEEEEEEeCCCCEEEEEeCCC------eEEEEECCCCcEEEEE
Confidence             32   7899999999999999999988      9999999877655443

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=99.85  E-value=1.2e-19  Score=129.33  Aligned_cols=112  Identities=13%  Similarity=0.187  Sum_probs=99.2

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..+++|+|+  +.++++|+.|++|++||++++  ..+..+.+|...|.+++|+|+++++++++.|+++++||++..    
T Consensus       187 v~~~~~~~~--~~~l~sg~~d~~v~~wd~~~~--~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~  262 (340)
T 1got_B          187 VMSLSLAPD--TRLFVSGACDASAKLWDVREG--MCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELM  262 (340)
T ss_dssp             EEEEEECTT--SSEEEEEETTSCEEEEETTTC--SEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred             eEEEEECCC--CCEEEEEeCCCcEEEEECCCC--eeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEE
Confidence            356777776  889999999999999999988  888899999999999999999999999999999999999876    


Q ss_pred             -cc-----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          90 -FI-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        90 -~~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                       +.     ..+.+++|+|++++|++++.|+      .|++||..+......+
T Consensus       263 ~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~------~i~vwd~~~~~~~~~~  308 (340)
T 1got_B          263 TYSHDNIICGITSVSFSKSGRLLLAGYDDF------NCNVWDALKADRAGVL  308 (340)
T ss_dssp             EECCTTCCSCEEEEEECTTSSEEEEEETTS------EEEEEETTTCCEEEEE
T ss_pred             EEccCCcccceEEEEECCCCCEEEEECCCC------eEEEEEcccCcEeeEe
Confidence             22     4689999999999999999988      9999999876655444

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=99.85  E-value=5.9e-20  Score=130.26  Aligned_cols=104  Identities=18%  Similarity=0.325  Sum_probs=95.7

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..+++|+|+  +++|++++.|++|++||++++  +.+..+.+|...|.+++|+|++.++++++.|+++++||++++    
T Consensus       209 v~~l~~spd--~~~l~s~s~dg~i~iwd~~~~--~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~  284 (321)
T 3ow8_A          209 IRSLTFSPD--SQLLVTASDDGYIKIYDVQHA--NLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVH  284 (321)
T ss_dssp             CCEEEECTT--SCEEEEECTTSCEEEEETTTC--CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred             eeEEEEcCC--CCEEEEEcCCCeEEEEECCCc--ceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEE
Confidence            467888887  889999999999999999988  788899999999999999999999999999999999999887    


Q ss_pred             -cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          90 -FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        90 -~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                       +.   ..+.+++|+|+++.|++++.|+      +|++||++
T Consensus       285 ~~~~h~~~v~~v~~s~~g~~l~s~~~d~------~i~vwd~p  320 (321)
T 3ow8_A          285 TFFDHQDQVWGVKYNGNGSKIVSVGDDQ------EIHIYDCP  320 (321)
T ss_dssp             EECCCSSCEEEEEECTTSSEEEEEETTC------CEEEEECC
T ss_pred             EEcCCCCcEEEEEECCCCCEEEEEeCCC------eEEEEeCC
Confidence             32   7899999999999999999988      99999974

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=99.84  E-value=1.4e-19  Score=129.73  Aligned_cols=109  Identities=17%  Similarity=0.130  Sum_probs=91.6

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCC-CEEEEEeCCCcEEEEECCcc---
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDG-KWMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~-~~l~~~~~~~~i~l~d~~~~---   89 (148)
                      ..+++|++.. +.+|++|+.|++|++||++++  +.+..+.+|...|.+++|+|++ +++++++.|++|++||++++   
T Consensus       217 ~~~~~~~p~~-~~~l~sg~~dg~v~~wd~~~~--~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~  293 (344)
T 4gqb_B          217 PTSLAWHPQQ-SEVFVFGDENGTVSLVDTKST--SCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF  293 (344)
T ss_dssp             EEEEEECSSC-TTEEEEEETTSEEEEEESCC----CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE
T ss_pred             ceeeeecCCC-CcceEEeccCCcEEEEECCCC--cEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE
Confidence            3567777753 788999999999999999998  8889999999999999999998 57899999999999999887   


Q ss_pred             -cc---ccceEEEEccCCC-EEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          90 -FI---QQVNALRITPDKQ-LLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        90 -~~---~~i~~~~~sp~~~-~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                       +.   ..|.+++|+|+++ .|++++.|+      +|++|++.+...
T Consensus       294 ~~~~H~~~V~~v~~sp~~~~llas~s~D~------~v~~w~v~~~~~  334 (344)
T 4gqb_B          294 RSQAHRDFVRDATWSPLNHSLLTTVGWDH------QVVHHVVPTEPL  334 (344)
T ss_dssp             EECCCSSCEEEEEECSSSTTEEEEEETTS------CEEEEECCC---
T ss_pred             EEcCCCCCEEEEEEeCCCCeEEEEEcCCC------eEEEEECCCCCC
Confidence             22   7899999999876 567889988      999999976543

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=99.84  E-value=2.4e-19  Score=128.48  Aligned_cols=113  Identities=14%  Similarity=0.136  Sum_probs=97.0

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCC-EEEEEeCCCcEEEEECCcc---
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGK-WMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~~~~~i~l~d~~~~---   89 (148)
                      ..+++|+++  +++|++|+.|++|++||++++  +.+..+.+|...|.+++|+|++. .+++++.|++|++||++++   
T Consensus       130 V~~v~~spd--g~~l~sgs~d~~i~iwd~~~~--~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~  205 (344)
T 4gqb_B          130 VSTVSVLSS--GTQAVSGSKDICIKVWDLAQQ--VVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPA  205 (344)
T ss_dssp             EEEEEECTT--SSEEEEEETTSCEEEEETTTT--EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCE
T ss_pred             EEEEEECCC--CCEEEEEeCCCeEEEEECCCC--cEEEEEcCcCCceEEEEecCCCCCceeeecccccccccccccccee
Confidence            467888887  899999999999999999998  88999999999999999999885 7899999999999999877   


Q ss_pred             --cc-----ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062          90 --FI-----QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN  136 (148)
Q Consensus        90 --~~-----~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~  136 (148)
                        +.     ..+.+++|+| ++++|++++.|+      +|++||+++.+.+..+.
T Consensus       206 ~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg------~v~~wd~~~~~~~~~~~  254 (344)
T 4gqb_B          206 SQIGCSAPGYLPTSLAWHPQQSEVFVFGDENG------TVSLVDTKSTSCVLSSA  254 (344)
T ss_dssp             EECC----CCCEEEEEECSSCTTEEEEEETTS------EEEEEESCC--CCEEEE
T ss_pred             eeeecceeeccceeeeecCCCCcceEEeccCC------cEEEEECCCCcEEEEEc
Confidence              22     5688999999 567889999988      99999999877665543

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=99.84  E-value=4e-19  Score=124.70  Aligned_cols=112  Identities=16%  Similarity=0.286  Sum_probs=100.4

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..+++|+++  +++|++++.|+.|++||++++  +.+..+.+|...|.+++|+|+++++++++.|+.+++||+++.    
T Consensus        68 v~~~~~~~~--~~~l~s~~~d~~i~vwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~  143 (312)
T 4ery_A           68 ISDVAWSSD--SNLLVSASDDKTLKIWDVSSG--KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLK  143 (312)
T ss_dssp             EEEEEECTT--SSEEEEEETTSEEEEEETTTC--CEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEE
T ss_pred             eEEEEEcCC--CCEEEEECCCCEEEEEECCCC--cEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEE
Confidence            457788887  899999999999999999988  888899999999999999999999999999999999999876    


Q ss_pred             -cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          90 -FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        90 -~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                       +.   .++.+++|+|++++|++++.|+      .|++||+++.+.....
T Consensus       144 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~------~i~~wd~~~~~~~~~~  187 (312)
T 4ery_A          144 TLPAHSDPVSAVHFNRDGSLIVSSSYDG------LCRIWDTASGQCLKTL  187 (312)
T ss_dssp             EECCCSSCEEEEEECTTSSEEEEEETTS------CEEEEETTTCCEEEEE
T ss_pred             EecCCCCcEEEEEEcCCCCEEEEEeCCC------cEEEEECCCCceeeEE
Confidence             22   6799999999999999999988      9999999877655444

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=99.83  E-value=5.1e-19  Score=126.90  Aligned_cols=113  Identities=15%  Similarity=0.180  Sum_probs=99.5

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----   89 (148)
                      .+++++++..+.+|++|+.|++|++||++++  +.+..+.+|...|.+++|+|++..+++++.|+++++||++..     
T Consensus       200 ~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~--~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~  277 (354)
T 2pbi_B          200 LCLDLAPSETGNTFVSGGCDKKAMVWDMRSG--QCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAI  277 (354)
T ss_dssp             EEEEECCCSSCCEEEEEETTSCEEEEETTTC--CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred             EEEEEEeCCCCCEEEEEeCCCeEEEEECCCC--cEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence            4667777666889999999999999999998  888899999999999999999999999999999999999876     


Q ss_pred             cc-----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          90 FI-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        90 ~~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                      +.     ..+.+++|+|++++|++++.|+      .|++||+.+......+
T Consensus       278 ~~~~~~~~~~~~~~~s~~g~~l~~g~~d~------~i~vwd~~~~~~~~~l  322 (354)
T 2pbi_B          278 YSKESIIFGASSVDFSLSGRLLFAGYNDY------TINVWDVLKGSRVSIL  322 (354)
T ss_dssp             ECCTTCCSCEEEEEECTTSSEEEEEETTS------CEEEEETTTCSEEEEE
T ss_pred             EcCCCcccceeEEEEeCCCCEEEEEECCC------cEEEEECCCCceEEEE
Confidence            22     3678999999999999999988      9999999877655444

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=99.83  E-value=5.4e-19  Score=124.04  Aligned_cols=112  Identities=16%  Similarity=0.225  Sum_probs=100.2

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..+++|+++  +++|++++.|+.+++|+..++  +....+.+|...|.+++|+|+++.+++++.|+.+++||+++.    
T Consensus        26 v~~~~~s~~--~~~l~s~~~dg~i~iw~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~  101 (312)
T 4ery_A           26 VSSVKFSPN--GEWLASSSADKLIKIWGAYDG--KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLK  101 (312)
T ss_dssp             EEEEEECTT--SSEEEEEETTSCEEEEETTTC--CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred             EEEEEECCC--CCEEEEeeCCCeEEEEeCCCc--ccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEE
Confidence            467788887  889999999999999999988  788888999999999999999999999999999999999887    


Q ss_pred             -cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          90 -FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        90 -~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                       +.   ..+.++.|+|++++|++++.|+      .|++||+++.+.....
T Consensus       102 ~~~~~~~~v~~~~~~~~~~~l~s~~~d~------~i~iwd~~~~~~~~~~  145 (312)
T 4ery_A          102 TLKGHSNYVFCCNFNPQSNLIVSGSFDE------SVRIWDVKTGKCLKTL  145 (312)
T ss_dssp             EEECCSSCEEEEEECSSSSEEEEEETTS------CEEEEETTTCCEEEEE
T ss_pred             EEcCCCCCEEEEEEcCCCCEEEEEeCCC------cEEEEECCCCEEEEEe
Confidence             22   7799999999999999999988      9999999877655444

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=99.83  E-value=2.3e-19  Score=128.86  Aligned_cols=110  Identities=12%  Similarity=0.180  Sum_probs=94.0

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCC-CEEEEEeCCCcEEEEECCcc--c
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDG-KWMFTGGEDCRARIWDLSLC--F   90 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~-~~l~~~~~~~~i~l~d~~~~--~   90 (148)
                      ..+++|+|+. +.+|++|+.|+.|++||++++  +.+..+.+|...|.+++|+|++ +++++++.|++|++||++++  +
T Consensus       229 v~~v~~sp~~-~~~la~g~~d~~i~~wd~~~~--~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~  305 (357)
T 4g56_B          229 PTSVTWHPEK-DDTFACGDETGNVSLVNIKNP--DSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVF  305 (357)
T ss_dssp             EEEEEECTTS-TTEEEEEESSSCEEEEESSCG--GGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEE
T ss_pred             ccchhhhhcc-cceEEEeecccceeEEECCCC--cEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEe
Confidence            4577888763 678999999999999999998  8889999999999999999987 57899999999999999987  2


Q ss_pred             ---c--ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062          91 ---I--QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNSCYPAAV  132 (148)
Q Consensus        91 ---~--~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~  132 (148)
                         .  ..|++++|+| ++++|++++.|+      +|++||+......
T Consensus       306 ~~~~H~~~V~~vafsP~d~~~l~s~s~Dg------~v~iW~~~~~~~~  347 (357)
T 4g56_B          306 RDLSHRDFVTGVAWSPLDHSKFTTVGWDH------KVLHHHLPSEGRT  347 (357)
T ss_dssp             EECCCSSCEEEEEECSSSTTEEEEEETTS------CEEEEECC-----
T ss_pred             EECCCCCCEEEEEEeCCCCCEEEEEcCCC------eEEEEECCCCCcc
Confidence               2  7899999999 899999999999      9999999765433

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=99.82  E-value=2.6e-19  Score=127.86  Aligned_cols=106  Identities=19%  Similarity=0.323  Sum_probs=92.1

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCce--E-EecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPV--I-NCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~--~-~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--   89 (148)
                      ..++|+|+  +++|++|+.|++|++||+++.  ...  . ...+|...|.+++|+|+++++++++.|+++++||+...  
T Consensus        20 ~~l~~sp~--g~~las~~~D~~i~iw~~~~~--~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~   95 (345)
T 3fm0_A           20 WFLAWNPA--GTLLASCGGDRRIRIWGTEGD--SWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDF   95 (345)
T ss_dssp             EEEEECTT--SSCEEEEETTSCEEEEEEETT--EEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-E
T ss_pred             EEEEECCC--CCEEEEEcCCCeEEEEEcCCC--cceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCe
Confidence            46788887  899999999999999999876  422  2 23579999999999999999999999999999998765  


Q ss_pred             -----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 -----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 -----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                           +.   ..+.+++|+|++++|++++.|+      .|++||+....
T Consensus        96 ~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~------~v~iwd~~~~~  138 (345)
T 3fm0_A           96 ECVTTLEGHENEVKSVAWAPSGNLLATCSRDK------SVWVWEVDEED  138 (345)
T ss_dssp             EEEEEECCCSSCEEEEEECTTSSEEEEEETTS------CEEEEEECTTS
T ss_pred             EEEEEccCCCCCceEEEEeCCCCEEEEEECCC------eEEEEECCCCC
Confidence                 22   7899999999999999999988      99999997654

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=99.82  E-value=5.6e-19  Score=128.93  Aligned_cols=110  Identities=20%  Similarity=0.325  Sum_probs=99.1

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..+++|+++  +++|++|+.|++|++||+.+.  +.+..+.+|...|.+++|+|++..+++++.|+++++||++++    
T Consensus       153 V~~v~~~~~--~~~l~sgs~D~~i~iwd~~~~--~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~  228 (410)
T 1vyh_C          153 VQDISFDHS--GKLLASCSADMTIKLWDFQGF--ECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVK  228 (410)
T ss_dssp             EEEEEECTT--SSEEEEEETTSCCCEEETTSS--CEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred             EEEEEEcCC--CCEEEEEeCCCeEEEEeCCCC--ceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence            467788876  889999999999999999988  888999999999999999999999999999999999999887    


Q ss_pred             -cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCccee
Q psy7062          90 -FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVV  133 (148)
Q Consensus        90 -~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~  133 (148)
                       +.   ..+.++.|+|++++|++++.|+      .|++||+.+.....
T Consensus       229 ~~~~h~~~v~~~~~~~~g~~l~s~s~D~------~v~vwd~~~~~~~~  270 (410)
T 1vyh_C          229 TFTGHREWVRMVRPNQDGTLIASCSNDQ------TVRVWVVATKECKA  270 (410)
T ss_dssp             EEECCSSCEEEEEECTTSSEEEEEETTS------CEEEEETTTCCEEE
T ss_pred             EEeCCCccEEEEEECCCCCEEEEEcCCC------eEEEEECCCCceee
Confidence             32   6789999999999999999988      99999998765443

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=99.82  E-value=1.1e-18  Score=124.02  Aligned_cols=108  Identities=19%  Similarity=0.246  Sum_probs=87.5

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCC-----CCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCc
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNN-----PNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSL   88 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~-----~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~   88 (148)
                      ..+++|+|+  +++|++++.|++|++||++...     .+.+..+.+|...|.+++|+|+++++++++.|+++++||++.
T Consensus        61 v~~v~~sp~--~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~  138 (330)
T 2hes_X           61 IRSVAWRPH--TSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDE  138 (330)
T ss_dssp             EEEEEECTT--SSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCT
T ss_pred             EEEEEECCC--CCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccC
Confidence            467888887  8899999999999999995421     145667889999999999999999999999999999999942


Q ss_pred             c---------cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          89 C---------FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        89 ~---------~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                      .         +.   ..+.+++|+|++++|++++.|+      +|++||....
T Consensus       139 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~------~i~iW~~~~~  185 (330)
T 2hes_X          139 SGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDD------TVRIWKDYDD  185 (330)
T ss_dssp             TCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTS------CEEEEEEETT
T ss_pred             CCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCC------eEEEEECCCC
Confidence            1         22   6799999999999999999988      9999998754

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=99.82  E-value=1.4e-18  Score=121.71  Aligned_cols=108  Identities=17%  Similarity=0.167  Sum_probs=93.9

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEcc--CCCEEEEEeCCCcEEEEECCcc--
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQE--DGKWMFTGGEDCRARIWDLSLC--   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp--~~~~l~~~~~~~~i~l~d~~~~--   89 (148)
                      ..+++|+++  +++|++|+.|++|++||++....+.+..+.+|...|.+++|+|  +++.+++++.|+++++||++++  
T Consensus        12 V~~~~~s~~--g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~   89 (297)
T 2pm7_B           12 IHDAVMDYY--GKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRW   89 (297)
T ss_dssp             EEEEEECTT--SSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCB
T ss_pred             eEEEEECCC--CCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCce
Confidence            467888887  8999999999999999997542356788999999999999986  4899999999999999999865  


Q ss_pred             -----cc---ccceEEEEccC--CCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          90 -----FI---QQVNALRITPD--KQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        90 -----~~---~~i~~~~~sp~--~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                           +.   ..+.+++|+|+  +..|++++.|+      .|++||++..
T Consensus        90 ~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~------~v~~wd~~~~  133 (297)
T 2pm7_B           90 SQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDG------KVSVVEFKEN  133 (297)
T ss_dssp             CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTS------EEEEEEBCSS
T ss_pred             EEEEEeecCCCceeEEEeCcCCCCcEEEEEECCC------cEEEEEecCC
Confidence                 22   67999999997  88999999988      9999999865

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=99.81  E-value=1.8e-18  Score=124.03  Aligned_cols=109  Identities=20%  Similarity=0.327  Sum_probs=96.6

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEcc--CCCEEEEEeCCCcEEEEECCcc---
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQE--DGKWMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp--~~~~l~~~~~~~~i~l~d~~~~---   89 (148)
                      .+++|+++  +..|++++.|++|++||++++  +.+..+.+|...|.+++++|  +++.+++++.|+.+++||++++   
T Consensus       158 ~~~~~~~~--~~~l~t~s~D~~v~lwd~~~~--~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~  233 (354)
T 2pbi_B          158 SACSFTNS--DMQILTASGDGTCALWDVESG--QLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCV  233 (354)
T ss_dssp             EEEEECSS--SSEEEEEETTSEEEEEETTTC--CEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEE
T ss_pred             EEEEEeCC--CCEEEEEeCCCcEEEEeCCCC--eEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence            56777776  788999999999999999998  88899999999999999987  5789999999999999999887   


Q ss_pred             --cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCccee
Q psy7062          90 --FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVV  133 (148)
Q Consensus        90 --~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~  133 (148)
                        +.   ..+.+++|+|+++.|++++.|+      +|++||++......
T Consensus       234 ~~~~~h~~~v~~v~~~p~~~~l~s~s~D~------~v~lwd~~~~~~~~  276 (354)
T 2pbi_B          234 QAFETHESDVNSVRYYPSGDAFASGSDDA------TCRLYDLRADREVA  276 (354)
T ss_dssp             EEECCCSSCEEEEEECTTSSEEEEEETTS------CEEEEETTTTEEEE
T ss_pred             EEecCCCCCeEEEEEeCCCCEEEEEeCCC------eEEEEECCCCcEEE
Confidence              32   7799999999999999999988      99999998765443

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=99.81  E-value=1e-18  Score=125.88  Aligned_cols=107  Identities=13%  Similarity=0.137  Sum_probs=91.1

Q ss_pred             EEEEEeCCCCccEEEEEecCC----eEEEEeCCCCCCC--ceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCc
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQ----HIRMYDFGSNNPN--PVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSL   88 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~----~v~~~d~~~~~~~--~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~   88 (148)
                      ..++|+|+  +.++++++.++    .++.|++......  ....+.+|...|++++|+|+|+++++|+.|++|++||+++
T Consensus       223 ~~v~fspd--g~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~  300 (365)
T 4h5i_A          223 SKINFIAD--DTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKD  300 (365)
T ss_dssp             EEEEEEET--TEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTT
T ss_pred             EEEEEcCC--CCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCC
Confidence            56788888  88899988887    6889998765211  1345678999999999999999999999999999999998


Q ss_pred             c-----c-c---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          89 C-----F-I---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        89 ~-----~-~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                      +     + .   .+|++++|+||+++|++++.|+      +|++||++..
T Consensus       301 ~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~------tvrvw~ip~~  344 (365)
T 4h5i_A          301 LSMSKIFKQAHSFAITEVTISPDSTYVASVSAAN------TIHIIKLPLN  344 (365)
T ss_dssp             TEEEEEETTSSSSCEEEEEECTTSCEEEEEETTS------EEEEEECCTT
T ss_pred             CcEEEEecCcccCCEEEEEECCCCCEEEEEeCCC------eEEEEEcCCC
Confidence            7     2 2   7899999999999999999999      9999999643

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=99.81  E-value=1.5e-18  Score=125.89  Aligned_cols=110  Identities=23%  Similarity=0.348  Sum_probs=98.6

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..+++|+++  +++|++|+.|++|++||++++  +.+..+.+|...|.+++|+|++..+++++.|+++++||++++    
T Consensus       126 v~~v~~s~d--g~~l~s~~~d~~i~iwd~~~~--~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~  201 (393)
T 1erj_A          126 IRSVCFSPD--GKFLATGAEDRLIRIWDIENR--KIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSL  201 (393)
T ss_dssp             EEEEEECTT--SSEEEEEETTSCEEEEETTTT--EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred             EEEEEECCC--CCEEEEEcCCCeEEEEECCCC--cEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEE
Confidence            357888887  899999999999999999988  888899999999999999999999999999999999999887    


Q ss_pred             -cc--ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeecCCCccee
Q psy7062          90 -FI--QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNSCYPAAVV  133 (148)
Q Consensus        90 -~~--~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~  133 (148)
                       +.  ..+.+++|+| ++++|++++.|+      .|++||+++.....
T Consensus       202 ~~~~~~~v~~~~~~~~~~~~l~~~s~d~------~v~iwd~~~~~~~~  243 (393)
T 1erj_A          202 TLSIEDGVTTVAVSPGDGKYIAAGSLDR------AVRVWDSETGFLVE  243 (393)
T ss_dssp             EEECSSCEEEEEECSTTCCEEEEEETTS------CEEEEETTTCCEEE
T ss_pred             EEEcCCCcEEEEEECCCCCEEEEEcCCC------cEEEEECCCCcEEE
Confidence             22  7789999999 899999999988      99999998765443

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=99.81  E-value=1.4e-18  Score=123.78  Aligned_cols=109  Identities=15%  Similarity=0.323  Sum_probs=95.1

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----   89 (148)
                      .++.|.++  + .+++++.|++|++||++++  +.+..+.+|...|.+++|+|+++++++++.|+.+++||+++.     
T Consensus       147 ~~~~~~~~--~-~l~s~s~d~~i~~wd~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~  221 (340)
T 1got_B          147 SCCRFLDD--N-QIVTSSGDTTCALWDIETG--QQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQT  221 (340)
T ss_dssp             EEEEEEET--T-EEEEEETTSCEEEEETTTT--EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEE
T ss_pred             EEEEECCC--C-cEEEEECCCcEEEEECCCC--cEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEE
Confidence            45566654  3 4778899999999999998  888899999999999999999999999999999999999887     


Q ss_pred             cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceec
Q psy7062          90 FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVA  134 (148)
Q Consensus        90 ~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~  134 (148)
                      +.   ..+.+++|+|+++.|++++.|+      +|++||++..+....
T Consensus       222 ~~~h~~~v~~v~~~p~~~~l~s~s~d~------~v~iwd~~~~~~~~~  263 (340)
T 1got_B          222 FTGHESDINAICFFPNGNAFATGSDDA------TCRLFDLRADQELMT  263 (340)
T ss_dssp             ECCCSSCEEEEEECTTSSEEEEEETTS------CEEEEETTTTEEEEE
T ss_pred             EcCCcCCEEEEEEcCCCCEEEEEcCCC------cEEEEECCCCcEEEE
Confidence            32   7799999999999999999988      999999987665443

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=99.81  E-value=9.2e-19  Score=125.03  Aligned_cols=109  Identities=18%  Similarity=0.204  Sum_probs=95.4

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..+++|+|+  +++|++++.|+++++||+.....+.+..+.+|...|.+++|+|+++++++++.|+++++||+...    
T Consensus        64 v~~~~~sp~--g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~  141 (345)
T 3fm0_A           64 VRKVAWSPC--GNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYE  141 (345)
T ss_dssp             EEEEEECTT--SSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEE
T ss_pred             EEEEEECCC--CCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeE
Confidence            467888887  89999999999999999987633456788899999999999999999999999999999999764    


Q ss_pred             ----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 ----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 ----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                          +.   ..+.+++|+|++++|++++.|+      .|++||.+...
T Consensus       142 ~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~------~i~~w~~~~~~  183 (345)
T 3fm0_A          142 CVSVLNSHTQDVKHVVWHPSQELLASASYDD------TVKLYREEEDD  183 (345)
T ss_dssp             EEEEECCCCSCEEEEEECSSSSCEEEEETTS------CEEEEEEETTE
T ss_pred             EEEEecCcCCCeEEEEECCCCCEEEEEeCCC------cEEEEEecCCC
Confidence                22   6799999999999999999988      99999987653

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=99.80  E-value=4.5e-18  Score=123.29  Aligned_cols=115  Identities=16%  Similarity=0.223  Sum_probs=99.1

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCC-----CceEEecCCCCCEEEEEEccCC-CEEEEEeCCCcEEEEECC
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNP-----NPVINCEGVSKNVVEVGFQEDG-KWMFTGGEDCRARIWDLS   87 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~-----~~~~~~~~~~~~i~~~~~sp~~-~~l~~~~~~~~i~l~d~~   87 (148)
                      ..+++|++. .+++|++++.|++|++||+.++..     +.+..+.+|...|.+++|+|++ ..+++++.|+.+++||++
T Consensus        84 V~~~~~~p~-~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~  162 (402)
T 2aq5_A           84 VLDIAWCPH-NDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVG  162 (402)
T ss_dssp             EEEEEECTT-CTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETT
T ss_pred             EEEEEeCCC-CCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECC
Confidence            467778872 288999999999999999987632     3567888999999999999998 699999999999999998


Q ss_pred             cc-----c--c---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          88 LC-----F--I---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        88 ~~-----~--~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                      ++     +  .   ..+.+++|+|+++.|++++.|+      .|++||+++.+.....
T Consensus       163 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~------~i~iwd~~~~~~~~~~  214 (402)
T 2aq5_A          163 TGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDK------RVRVIEPRKGTVVAEK  214 (402)
T ss_dssp             TTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTS------EEEEEETTTTEEEEEE
T ss_pred             CCCccEEEecCCCCCceEEEEECCCCCEEEEEecCC------cEEEEeCCCCceeeee
Confidence            87     4  3   7799999999999999999988      9999999987765554

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=99.80  E-value=1.2e-18  Score=127.91  Aligned_cols=108  Identities=15%  Similarity=0.261  Sum_probs=92.8

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEECCcc---
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d~~~~---   89 (148)
                      ..+++|+|.. +.+||+|+.||+|++||+.++.......+.+|...|++++|+| ++..|++++.|++|++||++..   
T Consensus       122 V~~l~~~P~~-~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~  200 (435)
T 4e54_B          122 ATSLAWHPTH-PSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILR  200 (435)
T ss_dssp             EEEEEECSSC-TTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEE
T ss_pred             EEEEEEeCCC-CCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCcee
Confidence            5789999853 6789999999999999998873344556678999999999998 7899999999999999999876   


Q ss_pred             -cc------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062          90 -FI------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        90 -~~------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                       +.      ..+.+++|+|++++|++++.|+      .|++||++.
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg------~i~~wd~~~  240 (435)
T 4e54_B          201 VFASSDTINIWFCSLDVSASSRMVVTGDNVG------NVILLNMDG  240 (435)
T ss_dssp             EEECCSSCSCCCCCEEEETTTTEEEEECSSS------BEEEEESSS
T ss_pred             EEeccCCCCccEEEEEECCCCCEEEEEeCCC------cEeeeccCc
Confidence             11      5578899999999999999988      999999864

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=99.80  E-value=2.7e-18  Score=130.96  Aligned_cols=110  Identities=16%  Similarity=0.128  Sum_probs=97.1

Q ss_pred             cEEEEEeCCCCcc-EEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062          14 QISTVFDSKHLVE-MVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~-~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---   89 (148)
                      ..+++|+|+  +. .|++++.|+++++||.++.  +.+..+.+|...|.+++|+|+|+++++++.|+++++||+.++   
T Consensus       150 v~~v~f~p~--~~~~l~s~s~D~~v~lwd~~~~--~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~  225 (611)
T 1nr0_A          150 MNSVDFKPS--RPFRIISGSDDNTVAIFEGPPF--KFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKT  225 (611)
T ss_dssp             EEEEEECSS--SSCEEEEEETTSCEEEEETTTB--EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE
T ss_pred             ceEEEECCC--CCeEEEEEeCCCeEEEEECCCC--eEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEe
Confidence            467888887  44 6899999999999999887  778889999999999999999999999999999999998765   


Q ss_pred             --c--------c--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCccee
Q psy7062          90 --F--------I--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVV  133 (148)
Q Consensus        90 --~--------~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~  133 (148)
                        +        .  ..+.+++|+|++++|++++.|+      +|++||+.+.+...
T Consensus       226 ~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~------~v~lWd~~~~~~~~  275 (611)
T 1nr0_A          226 GVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADK------TIKIWNVATLKVEK  275 (611)
T ss_dssp             EECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTS------EEEEEETTTTEEEE
T ss_pred             eeeccccccccccCCCEEEEEECCCCCEEEEEeCCC------eEEEEeCCCCceee
Confidence              2        2  6799999999999999999988      99999998766543

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=99.80  E-value=5.8e-18  Score=119.70  Aligned_cols=111  Identities=14%  Similarity=0.234  Sum_probs=96.6

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..+++|+++  +.+|++++.|++|++||++++  +.+..+.+|...|.+++|+|++..+++++.|+++++||++..    
T Consensus        68 v~~~~~s~d--g~~l~s~s~D~~v~~wd~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~  143 (319)
T 3frx_A           68 VQDCTLTAD--GAYALSASWDKTLRLWDVATG--ETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLAT  143 (319)
T ss_dssp             EEEEEECTT--SSEEEEEETTSEEEEEETTTT--EEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEE
T ss_pred             EEEEEECCC--CCEEEEEeCCCEEEEEECCCC--CeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEE
Confidence            356677777  899999999999999999998  888899999999999999999999999999999999999866    


Q ss_pred             cc---ccceEEEEccC------CCEEEEEecCCceecCeeEEEeecCCCcceec
Q psy7062          90 FI---QQVNALRITPD------KQLLASAEELSCCYCGAAVFVYNSCYPAAVVA  134 (148)
Q Consensus        90 ~~---~~i~~~~~sp~------~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~  134 (148)
                      +.   ..+.++.|+|.      +..+++++.|+      .|++||++..+....
T Consensus       144 ~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~------~i~~wd~~~~~~~~~  191 (319)
T 3frx_A          144 LLGHNDWVSQVRVVPNEKADDDSVTIISAGNDK------MVKAWNLNQFQIEAD  191 (319)
T ss_dssp             ECCCSSCEEEEEECCC------CCEEEEEETTS------CEEEEETTTTEEEEE
T ss_pred             EeccCCcEEEEEEccCCCCCCCccEEEEEeCCC------EEEEEECCcchhhee
Confidence            22   77899999984      44899999988      999999987655443

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=99.80  E-value=3.2e-18  Score=121.99  Aligned_cols=107  Identities=16%  Similarity=0.267  Sum_probs=91.4

Q ss_pred             EEEEE-----eCCCCccEEEEEecCCeEEEEeCCCCCC-----CceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEE
Q psy7062          15 ISTVF-----DSKHLVEMVAALGGYQHIRMYDFGSNNP-----NPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIW   84 (148)
Q Consensus        15 ~~~~~-----~~~~~~~~l~~~~~d~~v~~~d~~~~~~-----~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~   84 (148)
                      .+++|     ++ ..+.+|++|+.|++|++||+.....     .....+.+|...|.+++|+|++.++++++.|+++++|
T Consensus        25 ~~~~~~~s~~~~-~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lw  103 (343)
T 2xzm_R           25 TSIVAGFSQKEN-EDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLW  103 (343)
T ss_dssp             EEEEECCCSSTT-CCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEE
T ss_pred             hheeeEEEeecC-CCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEE
Confidence            56666     33 2488999999999999999975411     2456788999999999999999999999999999999


Q ss_pred             ECCcc-----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062          85 DLSLC-----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        85 d~~~~-----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                      |++++     +.   ..+.+++|+|++++|++++.|+      .|++||+..
T Consensus       104 d~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~------~i~~wd~~~  149 (343)
T 2xzm_R          104 DLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAER------EIKLWNILG  149 (343)
T ss_dssp             ETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTS------CEEEEESSS
T ss_pred             ECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCC------EEEEEeccC
Confidence            99887     32   7899999999999999999988      999999863

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=99.80  E-value=1.6e-18  Score=125.68  Aligned_cols=115  Identities=11%  Similarity=0.156  Sum_probs=97.5

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..+++|+++  +++|++++.|++|++||++++  +.+..+.+|...|.+++|+|+++.+++++.|+.+++||++++    
T Consensus       142 v~~~~~~~~--~~~l~s~s~d~~i~iwd~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~  217 (420)
T 3vl1_A          142 ITKLKFFPS--GEALISSSQDMQLKIWSVKDG--SNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIH  217 (420)
T ss_dssp             EEEEEECTT--SSEEEEEETTSEEEEEETTTC--CCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEE
T ss_pred             cEEEEECCC--CCEEEEEeCCCeEEEEeCCCC--cCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeE
Confidence            467888887  889999999999999999988  788888999999999999999999999999999999999876    


Q ss_pred             -cc------cc---------------------ceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccCcc
Q psy7062          90 -FI------QQ---------------------VNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTL  138 (148)
Q Consensus        90 -~~------~~---------------------i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~~  138 (148)
                       +.      ..                     +.+++|+|++++|++++.|+      .|++||+++..........
T Consensus       218 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg------~i~i~d~~~~~~~~~~~~~  288 (420)
T 3vl1_A          218 TFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSG------VITVHNVFSKEQTIQLPSK  288 (420)
T ss_dssp             EECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTS------CEEEEETTTCCEEEEECCT
T ss_pred             EeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCC------eEEEEECCCCceeEEcccc
Confidence             21      23                     34455678999999999988      8999999987766555433

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=99.79  E-value=4.8e-18  Score=122.72  Aligned_cols=112  Identities=19%  Similarity=0.301  Sum_probs=94.2

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----   89 (148)
                      ..++|++. .+++|++|+.|++|++||++.. .+.+..+.+|...|.+++|+|+++.+++++.|+++++||++++     
T Consensus       209 ~~~~~~~~-~~~~l~sgs~D~~v~~wd~~~~-~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~  286 (380)
T 3iz6_a          209 LSLSINSL-NANMFISGSCDTTVRLWDLRIT-SRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQV  286 (380)
T ss_dssp             EEEEECSS-SCCEEEEEETTSCEEEEETTTT-CCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEE
T ss_pred             EEEEeecC-CCCEEEEEECCCeEEEEECCCC-CcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEE
Confidence            34555442 3789999999999999999843 1677888999999999999999999999999999999999986     


Q ss_pred             cc----------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceec
Q psy7062          90 FI----------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVA  134 (148)
Q Consensus        90 ~~----------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~  134 (148)
                      +.          ..+.+++|+|++++|++++.|+      .|++||....+....
T Consensus       287 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg------~i~vwd~~~~~~~~~  335 (380)
T 3iz6_a          287 YNREPDRNDNELPIVTSVAFSISGRLLFAGYSNG------DCYVWDTLLAEMVLN  335 (380)
T ss_dssp             ECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTS------CEEEEETTTCCEEEE
T ss_pred             ecccccccccccCceEEEEECCCCCEEEEEECCC------CEEEEECCCCceEEE
Confidence            11          2378999999999999999988      999999877665443

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=99.79  E-value=4.6e-18  Score=123.30  Aligned_cols=109  Identities=13%  Similarity=0.134  Sum_probs=96.5

Q ss_pred             EEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc-
Q psy7062          18 VFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI-   91 (148)
Q Consensus        18 ~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~-   91 (148)
                      +|+++  +++|++++.|+.|++||++++  +....+.+|...|.+++|+|+++++++++.|+.+++||+++.     +. 
T Consensus       104 ~~~~~--~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~  179 (420)
T 3vl1_A          104 TAKLQ--MRRFILGTTEGDIKVLDSNFN--LQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIG  179 (420)
T ss_dssp             EECSS--SCEEEEEETTSCEEEECTTSC--EEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEEC
T ss_pred             EEecC--CCEEEEEECCCCEEEEeCCCc--ceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcC
Confidence            44555  889999999999999999987  777777899999999999999999999999999999999876     32 


Q ss_pred             --ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062          92 --QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN  136 (148)
Q Consensus        92 --~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~  136 (148)
                        ..+.+++|+|+++.|++++.|+      .|++||+++.+......
T Consensus       180 h~~~v~~~~~~~~~~~l~s~~~d~------~v~iwd~~~~~~~~~~~  220 (420)
T 3vl1_A          180 HRATVTDIAIIDRGRNVLSASLDG------TIRLWECGTGTTIHTFN  220 (420)
T ss_dssp             CSSCEEEEEEETTTTEEEEEETTS------CEEEEETTTTEEEEEEC
T ss_pred             CCCcEEEEEEcCCCCEEEEEcCCC------cEEEeECCCCceeEEee
Confidence              7899999999999999999988      99999999877655443

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=99.79  E-value=2.1e-18  Score=124.67  Aligned_cols=107  Identities=15%  Similarity=0.210  Sum_probs=92.5

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCC-------CCEEEEEEccCCCEEEEEeCCCcEEEEEC
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVS-------KNVVEVGFQEDGKWMFTGGEDCRARIWDL   86 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~-------~~i~~~~~sp~~~~l~~~~~~~~i~l~d~   86 (148)
                      ..+++|+|+  +.+|++++.|++|++||++++  +.+..+..+.       ..+.+++|+|+|+++++++.|+.+++||+
T Consensus       252 v~~v~~~p~--~~~l~s~s~D~~i~lwd~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~  327 (380)
T 3iz6_a          252 INSVKFFPD--GQRFGTGSDDGTCRLFDMRTG--HQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDT  327 (380)
T ss_dssp             CCEEEECTT--SSEEEEECSSSCEEEEETTTT--EEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEET
T ss_pred             eEEEEEecC--CCeEEEEcCCCeEEEEECCCC--cEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEEC
Confidence            467888887  899999999999999999988  6666665432       34889999999999999999999999999


Q ss_pred             Ccc-----c----c---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          87 SLC-----F----I---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        87 ~~~-----~----~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                      ...     +    .   ..|.+++|+|++++|++++.|+      +|++|++...+
T Consensus       328 ~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~------~i~iW~~~~~~  377 (380)
T 3iz6_a          328 LLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDK------NLKIWAFSGHR  377 (380)
T ss_dssp             TTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTS------CEEEEECCSSS
T ss_pred             CCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCC------CEEEEecCCCc
Confidence            765     2    1   6799999999999999999999      99999987654

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=99.79  E-value=9.9e-19  Score=123.50  Aligned_cols=108  Identities=15%  Similarity=0.172  Sum_probs=92.9

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEcc--CCCEEEEEeCCCcEEEEECCcc--
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQE--DGKWMFTGGEDCRARIWDLSLC--   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp--~~~~l~~~~~~~~i~l~d~~~~--   89 (148)
                      ..+++|+++  +++|++|+.|++|++||++++....+..+.+|...|.+++|+|  +++.+++++.|+++++||++++  
T Consensus        16 V~~v~~s~~--g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~   93 (316)
T 3bg1_A           16 IHDAQMDYY--GTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTW   93 (316)
T ss_dssp             EEEEEECGG--GCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCC
T ss_pred             EEEeeEcCC--CCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcc
Confidence            467788887  8999999999999999998762224677889999999999986  4899999999999999999864  


Q ss_pred             -----cc---ccceEEEEccC--CCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          90 -----FI---QQVNALRITPD--KQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        90 -----~~---~~i~~~~~sp~--~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                           +.   ..+.+++|+|+  +.+|++++.|+      .|++||++..
T Consensus        94 ~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~------~i~lwd~~~~  137 (316)
T 3bg1_A           94 EKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDG------AISLLTYTGE  137 (316)
T ss_dssp             CEEEEECCCSSCCCEEEECCTTTCSCEEEECSSS------CEEEEEECSS
T ss_pred             eEEEEccCCCCceEEEEECCCCCCcEEEEEcCCC------CEEEEecCCC
Confidence                 22   67999999997  78999999988      9999998765

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=99.79  E-value=4.9e-18  Score=127.68  Aligned_cols=104  Identities=19%  Similarity=0.326  Sum_probs=93.1

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..+++|+|+  |++|++|+.|++|++||. ++  +.+..+.+|...|++++|+|+++++++++.|+++++||....    
T Consensus        19 V~~~a~spd--g~~las~~~d~~v~iWd~-~~--~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~~~~~~~~   93 (577)
T 2ymu_A           19 VRGVAFSPD--GQTIASASDDKTVKLWNR-NG--QLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQT   93 (577)
T ss_dssp             EEEEEECTT--SSCEEEEETTSEEEEECT-TS--CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEE
T ss_pred             EEEEEECCC--CCEEEEEeCCCEEEEEEC-CC--CEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCEEEE
Confidence            468888888  899999999999999996 44  688899999999999999999999999999999999997654    


Q ss_pred             cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062          90 FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        90 ~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                      +.   ..+.+++|+|++++|++++.|+      .+++|+...
T Consensus        94 ~~~~~~~v~~~~~s~d~~~l~~~~~d~------~~~~~~~~~  129 (577)
T 2ymu_A           94 LTGHSSSVRGVAFSPDGQTIASASDDK------TVKLWNRNG  129 (577)
T ss_dssp             ECCCSSCEEEEEECTTSSEEEEEETTS------CEEEEETTC
T ss_pred             EECCCCCEEEEEECCCCCEEEEEcCCC------ceeeccccc
Confidence            32   7899999999999999999988      899998654

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=99.79  E-value=7.5e-18  Score=128.50  Aligned_cols=110  Identities=18%  Similarity=0.238  Sum_probs=95.7

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEec-------CCCCCEEEEEEccCCCEEEEEeCCCcEEEEEC
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCE-------GVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL   86 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~-------~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~   86 (148)
                      ..+++|+|+  +++|++++.|++|++||+.++  +.+..+.       +|...|.+++|+|+++.+++++.|+++++||+
T Consensus       193 V~~v~fspd--g~~las~s~D~~i~lwd~~~g--~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~  268 (611)
T 1nr0_A          193 VHSVRYNPD--GSLFASTGGDGTIVLYNGVDG--TKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNV  268 (611)
T ss_dssp             EEEEEECTT--SSEEEEEETTSCEEEEETTTC--CEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred             eEEEEECCC--CCEEEEEECCCcEEEEECCCC--cEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence            467888887  899999999999999999988  7777763       79999999999999999999999999999999


Q ss_pred             Ccc-----c-------------------------------------------c---ccceEEEEccCCCEEEEEecCCce
Q psy7062          87 SLC-----F-------------------------------------------I---QQVNALRITPDKQLLASAEELSCC  115 (148)
Q Consensus        87 ~~~-----~-------------------------------------------~---~~i~~~~~sp~~~~l~~~~~d~~~  115 (148)
                      .++     +                                           .   ..+.+++|+|++++|++++.|+  
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~--  346 (611)
T 1nr0_A          269 ATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEG--  346 (611)
T ss_dssp             TTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTS--
T ss_pred             CCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCC--
Confidence            754     1                                           0   4578899999999999999988  


Q ss_pred             ecCeeEEEeecCCCccee
Q psy7062         116 YCGAAVFVYNSCYPAAVV  133 (148)
Q Consensus       116 ~~~~~i~~~d~~~~~~~~  133 (148)
                          +|++||+.+.....
T Consensus       347 ----~v~~Wd~~~~~~~~  360 (611)
T 1nr0_A          347 ----HINSWDISTGISNR  360 (611)
T ss_dssp             ----CEEEEETTTCCEEE
T ss_pred             ----cEEEEECCCCceee
Confidence                99999998765443

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=99.79  E-value=3.5e-18  Score=120.82  Aligned_cols=108  Identities=16%  Similarity=0.277  Sum_probs=92.9

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCC---CceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNP---NPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~---~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-   89 (148)
                      ..+++|++.. +++|++|+.|++|++||+.....   .++..+.+|...|.+++|+|+++++++++.|+++++||+.++ 
T Consensus        20 V~~l~~~~~~-~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~   98 (319)
T 3frx_A           20 VTSLATSAGQ-PNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGE   98 (319)
T ss_dssp             EEEEEECSSC-TTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred             EEEEEccCCC-ccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCC
Confidence            3566777652 58999999999999999975311   246778899999999999999999999999999999999887 


Q ss_pred             ----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062          90 ----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        90 ----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                          +.   ..+.+++|+|+++.|++++.|+      +|++||++.
T Consensus        99 ~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~------~i~vwd~~~  138 (319)
T 3frx_A           99 TYQRFVGHKSDVMSVDIDKKASMIISGSRDK------TIKVWTIKG  138 (319)
T ss_dssp             EEEEEECCSSCEEEEEECTTSCEEEEEETTS------CEEEEETTS
T ss_pred             eeEEEccCCCcEEEEEEcCCCCEEEEEeCCC------eEEEEECCC
Confidence                32   7899999999999999999998      999999864

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=99.79  E-value=3.9e-18  Score=121.07  Aligned_cols=108  Identities=13%  Similarity=0.067  Sum_probs=91.8

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCC--CCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNN--PNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~--~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--   89 (148)
                      ..+++|+|+  +++|++++.|++|++||++...  .+.+..+.+|...|.+++|+|++.++++++.|+++++||....  
T Consensus       110 V~~v~~sp~--g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~  187 (330)
T 2hes_X          110 VKGVAWSND--GYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDW  187 (330)
T ss_dssp             EEEEEECTT--SCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEE
T ss_pred             EEEEEECCC--CCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCe
Confidence            457788887  8999999999999999995321  1346778899999999999999999999999999999998653  


Q ss_pred             -----cc---ccceEEEEccC--CCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          90 -----FI---QQVNALRITPD--KQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        90 -----~~---~~i~~~~~sp~--~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                           +.   ..+.+++|+|+  +..|++++.|+      +|++||+...
T Consensus       188 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~------~v~iw~~~~~  231 (330)
T 2hes_X          188 ECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDS------TVRVWKYMGD  231 (330)
T ss_dssp             EEEEEECCCSSCEEEEEECCSSSSCEEEEEETTS------CEEEEEEEEE
T ss_pred             eEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCC------eEEEEEecCC
Confidence                 22   78999999998  67899999988      9999998643

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=99.79  E-value=9e-18  Score=118.33  Aligned_cols=74  Identities=19%  Similarity=0.316  Sum_probs=67.0

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~   89 (148)
                      ...++|.++....++++++.|+.+++||+++.  +.+..+.+|...|.+++|+|+++++++++.|+.+++||+++.
T Consensus       174 v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~--~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~  247 (340)
T 4aow_A          174 VSCVRFSPNSSNPIIVSCGWDKLVKVWNLANC--KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEG  247 (340)
T ss_dssp             EEEEEECSCSSSCEEEEEETTSCEEEEETTTT--EEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTT
T ss_pred             ccceEEccCCCCcEEEEEcCCCEEEEEECCCC--ceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccC
Confidence            35677887777788999999999999999998  888899999999999999999999999999999999999765

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=99.78  E-value=4e-18  Score=128.19  Aligned_cols=101  Identities=20%  Similarity=0.335  Sum_probs=90.6

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..+++|+|+  +++|++++.|++|++||.. +  +.+..+.+|...|++++|+|++++|++++.|+.|++||....    
T Consensus       470 v~~~~~spd--~~~las~~~d~~i~iw~~~-~--~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~~~~~~  544 (577)
T 2ymu_A          470 VRGVAFSPD--GQTIASASDDKTVKLWNRN-G--QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQT  544 (577)
T ss_dssp             EEEEEECTT--SCEEEEEETTSEEEEEETT-S--CEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEE
T ss_pred             EEEEEEcCC--CCEEEEEeCCCEEEEEcCC-C--CEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCCCEEEE
Confidence            357788887  8999999999999999964 4  678889999999999999999999999999999999997544    


Q ss_pred             cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEee
Q psy7062          90 FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYN  125 (148)
Q Consensus        90 ~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d  125 (148)
                      +.   ..|.+++|+||+++|++++.|+      +|++||
T Consensus       545 ~~~h~~~v~~~~fs~dg~~l~s~~~D~------~i~~Wd  577 (577)
T 2ymu_A          545 LTGHSSSVWGVAFSPDGQTIASASSDK------TVKLWN  577 (577)
T ss_dssp             EECCSSCEEEEEECTTSSCEEEEETTS------CEEEEC
T ss_pred             EcCCCCCEEEEEEcCCCCEEEEEeCCC------EEEEeC
Confidence            32   7899999999999999999998      999998

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=99.78  E-value=1.4e-17  Score=118.16  Aligned_cols=110  Identities=13%  Similarity=0.148  Sum_probs=98.6

Q ss_pred             cEEEEEeCCCC--ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEECCcc-
Q psy7062          14 QISTVFDSKHL--VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIWDLSLC-   89 (148)
Q Consensus        14 ~~~~~~~~~~~--~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d~~~~-   89 (148)
                      ..+++|+++..  +.+|++++.|+.|++||+.++  +.+..+.+|...|.+++|+| ++..+++++.|+.|++||+++. 
T Consensus        72 v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  149 (366)
T 3k26_A           72 FYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITM--QCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDT  149 (366)
T ss_dssp             EEEEEEEECTTTCCEEEEEEETTCEEEEECTTTC--CEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTE
T ss_pred             EEEEEeccCCCCCCCEEEEecCCCEEEEEEchhc--eEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCe
Confidence            56788887644  679999999999999999988  88888999999999999999 9999999999999999999876 


Q ss_pred             ----c---c---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          90 ----F---I---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        90 ----~---~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                          +   .   ..+.+++|+|++++|++++.|+      .|++||+++.+.
T Consensus       150 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg------~i~i~d~~~~~~  195 (366)
T 3k26_A          150 LVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDH------SLKLWRINSKRM  195 (366)
T ss_dssp             EEEEECSTTSCSSCEEEEEECTTSSEEEEEETTS------CEEEEESCSHHH
T ss_pred             EEEEecccccccCceeEEEECCCCCEEEEecCCC------CEEEEECCCCcc
Confidence                3   2   7899999999999999999988      999999986543

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=99.78  E-value=1.5e-17  Score=116.43  Aligned_cols=110  Identities=10%  Similarity=0.086  Sum_probs=92.9

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccC--CCEEEEEeCCCcEEEEECCcc---
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQED--GKWMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~--~~~l~~~~~~~~i~l~d~~~~---   89 (148)
                      .+++|+++..+++|++++.|++|++||++++....+..+.+|...|.+++|+|+  +.++++++.|+.+++||++..   
T Consensus        57 ~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~  136 (297)
T 2pm7_B           57 WRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTT  136 (297)
T ss_dssp             EEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCB
T ss_pred             EEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCce
Confidence            567776654578999999999999999987633456677889999999999997  889999999999999999764   


Q ss_pred             ----cc---ccceEEEEccC-------------CCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 ----FI---QQVNALRITPD-------------KQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 ----~~---~~i~~~~~sp~-------------~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                          +.   ..+.+++|+|+             ++.|++++.|+      +|++||++...
T Consensus       137 ~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~------~v~lwd~~~~~  191 (297)
T 2pm7_B          137 SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN------LVKIWKYNSDA  191 (297)
T ss_dssp             CCEEEECCSSCEEEEEECCCC------------CCEEEEEETTS------CEEEEEEETTT
T ss_pred             eeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCC------cEEEEEEcCCC
Confidence                22   67899999996             57999999988      99999988654

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=99.78  E-value=9.2e-18  Score=120.54  Aligned_cols=113  Identities=17%  Similarity=0.172  Sum_probs=97.7

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCC-EEEEEeCCCcEEEEECCcc---
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGK-WMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~~~~~i~l~d~~~~---   89 (148)
                      ..+++|+|+  +++|++++.|++|++||++++  +.+..+.+|...|.+++|+|++. .+++++.|+++++||++++   
T Consensus       142 V~~v~~spd--g~~l~sgs~dg~v~iwd~~~~--~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~  217 (357)
T 4g56_B          142 VKTLSVFSD--GTQAVSGGKDFSVKVWDLSQK--AVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPA  217 (357)
T ss_dssp             EEEEEECSS--SSEEEEEETTSCEEEEETTTT--EEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCB
T ss_pred             EEEEEECCC--CCEEEEEeCCCeEEEEECCCC--cEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCcee
Confidence            467788887  899999999999999999998  88899999999999999999875 7899999999999999876   


Q ss_pred             --cc-----ccceEEEEccC-CCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062          90 --FI-----QQVNALRITPD-KQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN  136 (148)
Q Consensus        90 --~~-----~~i~~~~~sp~-~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~  136 (148)
                        +.     ..+.+++|+|+ +.+|++++.|+      .|++||+++.+....+.
T Consensus       218 ~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~------~i~~wd~~~~~~~~~~~  266 (357)
T 4g56_B          218 TRIDFCASDTIPTSVTWHPEKDDTFACGDETG------NVSLVNIKNPDSAQTSA  266 (357)
T ss_dssp             CBCCCTTCCSCEEEEEECTTSTTEEEEEESSS------CEEEEESSCGGGCEEEC
T ss_pred             eeeeeccccccccchhhhhcccceEEEeeccc------ceeEEECCCCcEeEEEe
Confidence              11     66899999996 56888899888      89999999877665443

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.78  E-value=6.8e-18  Score=120.41  Aligned_cols=105  Identities=15%  Similarity=0.179  Sum_probs=80.5

Q ss_pred             cEEEEEeC-CCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCC---CCEEEEEEccCCCE------------------
Q psy7062          14 QISTVFDS-KHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVS---KNVVEVGFQEDGKW------------------   71 (148)
Q Consensus        14 ~~~~~~~~-~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~---~~i~~~~~sp~~~~------------------   71 (148)
                      ...++|++ +..+++|++++.|++|++||++++  +.+.++.+|.   ..+.+++|+|+|+.                  
T Consensus       181 v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TG--k~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~  258 (356)
T 2w18_A          181 ETILTFAEVQGMQEALLGTTIMNNIVIWNLKTG--QLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSP  258 (356)
T ss_dssp             SCEEEEEEEETSTTEEEEEETTSEEEEEETTTC--CEEEEEECCC---CCCEEEEEEETTEEEEEEC------------C
T ss_pred             eeeEEeeccCCCCceEEEecCCCcEEEEECCCC--cEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCC
Confidence            34667776 445799999999999999999998  8888887643   24555555555543                  


Q ss_pred             ---------------------------------------EEEEeCCCcEEEEECCcc-----cc---ccce-EEEEccCC
Q psy7062          72 ---------------------------------------MFTGGEDCRARIWDLSLC-----FI---QQVN-ALRITPDK  103 (148)
Q Consensus        72 ---------------------------------------l~~~~~~~~i~l~d~~~~-----~~---~~i~-~~~~sp~~  103 (148)
                                                             +++++.|++|++||+.++     +.   ..+. .++|+|+|
T Consensus       259 D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG  338 (356)
T 2w18_A          259 VFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTD  338 (356)
T ss_dssp             CEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSS
T ss_pred             CcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCC
Confidence                                                   466667889999999887     33   3344 58999999


Q ss_pred             CEEEEEecCCceecCeeEEEeec
Q psy7062         104 QLLASAEELSCCYCGAAVFVYNS  126 (148)
Q Consensus       104 ~~l~~~~~d~~~~~~~~i~~~d~  126 (148)
                      ++|++|+.|+      +|++||+
T Consensus       339 ~~LaSGS~D~------TIklWd~  355 (356)
T 2w18_A          339 SHLLAGQKDG------NIFVYHY  355 (356)
T ss_dssp             SEEEEECTTS------CEEEEEE
T ss_pred             CEEEEEECCC------cEEEecC
Confidence            9999999988      9999985

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=99.78  E-value=3e-17  Score=116.91  Aligned_cols=104  Identities=15%  Similarity=0.236  Sum_probs=92.1

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..+++|+++  +.++++++.|++|++||++++  +.+..+.+|...|.+++|+|+++.+++++.|+++++||+...    
T Consensus        79 V~~~~~~~~--~~~l~s~s~D~~v~lwd~~~~--~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~  154 (343)
T 2xzm_R           79 VSDLALSQE--NCFAISSSWDKTLRLWDLRTG--TTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFS  154 (343)
T ss_dssp             EEEEEECSS--TTEEEEEETTSEEEEEETTSS--CEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEE
T ss_pred             eEEEEECCC--CCEEEEEcCCCcEEEEECCCC--cEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceee
Confidence            356777776  889999999999999999998  888899999999999999999999999999999999999754    


Q ss_pred             -c---c--ccceEEEEccCC----------CEEEEEecCCceecCeeEEEeecC
Q psy7062          90 -F---I--QQVNALRITPDK----------QLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        90 -~---~--~~i~~~~~sp~~----------~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                       .   .  ..+.+++|+|++          .+|++++.|+      .|++||..
T Consensus       155 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~------~i~iwd~~  202 (343)
T 2xzm_R          155 SAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDG------RLKVWNTN  202 (343)
T ss_dssp             CCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTS------EEEEEETT
T ss_pred             eecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCC------EEEEEcCC
Confidence             1   1  678999999986          7899999988      99999943

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=99.77  E-value=2e-17  Score=117.27  Aligned_cols=115  Identities=15%  Similarity=0.202  Sum_probs=97.1

Q ss_pred             cEEEEEeCCC-CccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062          14 QISTVFDSKH-LVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        14 ~~~~~~~~~~-~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---   89 (148)
                      ..+++|+++. .+++|++++.|+.|++||+++........+.+|...|.+++|+|+++++++++.|+.+++||+++.   
T Consensus        42 v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~  121 (368)
T 3mmy_A           42 IGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAI  121 (368)
T ss_dssp             EEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred             eEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCce
Confidence            4678888762 258999999999999999997322333778889999999999999999999999999999999887   


Q ss_pred             -cc---ccceEEEE--ccCCCEEEEEecCCceecCeeEEEeecCCCcceec
Q psy7062          90 -FI---QQVNALRI--TPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVA  134 (148)
Q Consensus        90 -~~---~~i~~~~~--sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~  134 (148)
                       +.   ..+.+++|  +|++++|++++.|+      .|++||+++.+....
T Consensus       122 ~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg------~i~vwd~~~~~~~~~  166 (368)
T 3mmy_A          122 QIAQHDAPVKTIHWIKAPNYSCVMTGSWDK------TLKFWDTRSSNPMMV  166 (368)
T ss_dssp             EEEECSSCEEEEEEEECSSCEEEEEEETTS------EEEEECSSCSSCSEE
T ss_pred             eeccccCceEEEEEEeCCCCCEEEEccCCC------cEEEEECCCCcEEEE
Confidence             11   88999999  88999999999988      999999987765443

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=99.77  E-value=1.4e-17  Score=118.50  Aligned_cols=113  Identities=9%  Similarity=0.013  Sum_probs=92.7

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEec-CCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--c
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCE-GVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--F   90 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~-~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--~   90 (148)
                      ..+++|+|...++++++++.|+++++||++++  +.+.... .+...+.+++|+|++.++++|+.|+.|++||++++  .
T Consensus       128 v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~--~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~  205 (343)
T 3lrv_A          128 IIYMYGHNEVNTEYFIWADNRGTIGFQSYEDD--SQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQA  205 (343)
T ss_dssp             EEEEECCC---CCEEEEEETTCCEEEEESSSS--CEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSC
T ss_pred             EEEEEcCCCCCCCEEEEEeCCCcEEEEECCCC--cEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCC
Confidence            45667777224899999999999999999988  6655553 34567999999999999999999999999999877  2


Q ss_pred             ----c----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          91 ----I----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        91 ----~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                          .    .++.+++|+|++.+|++++ ++      .|++||+++.+.....
T Consensus       206 ~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~------~v~iwd~~~~~~~~~~  251 (343)
T 3lrv_A          206 SSRFPVDEEAKIKEVKFADNGYWMVVEC-DQ------TVVCFDLRKDVGTLAY  251 (343)
T ss_dssp             CEECCCCTTSCEEEEEECTTSSEEEEEE-SS------BEEEEETTSSTTCBSS
T ss_pred             ccEEeccCCCCEEEEEEeCCCCEEEEEe-CC------eEEEEEcCCCCcceee
Confidence                1    7899999999999999999 44      7999999987665443

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=99.77  E-value=2.7e-17  Score=116.71  Aligned_cols=112  Identities=10%  Similarity=0.157  Sum_probs=96.7

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..+++|+++  +++|++++.|+.|++||+.++  +.+..+.+|...|.+++|+|+++++++++.|+.+++||+.+.    
T Consensus        35 v~~~~~s~~--~~~l~~~~~dg~i~vwd~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~  110 (369)
T 3zwl_B           35 LTQVKYNKE--GDLLFSCSKDSSASVWYSLNG--ERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVA  110 (369)
T ss_dssp             EEEEEECTT--SCEEEEEESSSCEEEEETTTC--CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEE
T ss_pred             EEEEEEcCC--CCEEEEEeCCCEEEEEeCCCc--hhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence            467788887  889999999999999999988  888999999999999999999999999999999999999887    


Q ss_pred             -cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 -FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 -~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                       +.  ..+.+++|+|+++.+++++.+.. .....|.+||+....
T Consensus       111 ~~~~~~~v~~~~~~~~~~~l~~~~~~~~-~~~g~i~~~d~~~~~  153 (369)
T 3zwl_B          111 TWKSPVPVKRVEFSPCGNYFLAILDNVM-KNPGSINIYEIERDS  153 (369)
T ss_dssp             EEECSSCEEEEEECTTSSEEEEEECCBT-TBCCEEEEEEEEECT
T ss_pred             EeecCCCeEEEEEccCCCEEEEecCCcc-CCCCEEEEEEecCCc
Confidence             22  88999999999999999998700 001289999987654

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=99.77  E-value=3.6e-17  Score=118.64  Aligned_cols=114  Identities=18%  Similarity=0.251  Sum_probs=94.4

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEe-------cCCCCCEEEEEEccCCCEEEEEeCCCcEEEEEC
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINC-------EGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL   86 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~-------~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~   86 (148)
                      ...++|++. .+.++++++.|+.|++||++++  ..+..+       .+|...|.+++|+|+++++++++.|+.+++||+
T Consensus       209 v~~~~~~~~-~~~~l~~~s~d~~v~iwd~~~~--~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~  285 (393)
T 1erj_A          209 VTTVAVSPG-DGKYIAAGSLDRAVRVWDSETG--FLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNL  285 (393)
T ss_dssp             EEEEEECST-TCCEEEEEETTSCEEEEETTTC--CEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred             cEEEEEECC-CCCEEEEEcCCCcEEEEECCCC--cEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence            456677772 2889999999999999999987  666555       578999999999999999999999999999999


Q ss_pred             Ccc-----------------cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062          87 SLC-----------------FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN  136 (148)
Q Consensus        87 ~~~-----------------~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~  136 (148)
                      +..                 +.   ..+.+++|+|++++|++++.|+      .|++||..+.+....+.
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~------~v~iwd~~~~~~~~~l~  349 (393)
T 1erj_A          286 QNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDR------GVLFWDKKSGNPLLMLQ  349 (393)
T ss_dssp             ---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTS------EEEEEETTTCCEEEEEE
T ss_pred             CCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCC------eEEEEECCCCeEEEEEC
Confidence            753                 11   5688999999999999999988      99999998877655443

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=99.76  E-value=5.5e-17  Score=113.82  Aligned_cols=111  Identities=14%  Similarity=0.263  Sum_probs=94.9

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCC--CceEEecCCCCCEEEEEEcc--CCCEEEEEeCCCcEEEEECCcc
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNP--NPVINCEGVSKNVVEVGFQE--DGKWMFTGGEDCRARIWDLSLC   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~--~~~~~~~~~~~~i~~~~~sp--~~~~l~~~~~~~~i~l~d~~~~   89 (148)
                      ..+++|+++  +++|++++.|+.|++||+.+...  +.+..+.+|...|.+++|+|  +++++++++.|+.+++||++..
T Consensus        14 v~~~~~~~~--~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~   91 (351)
T 3f3f_A           14 VHDVVYDFY--GRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPD   91 (351)
T ss_dssp             EEEEEECSS--SSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTT
T ss_pred             eeEEEEcCC--CCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCC
Confidence            567888886  88999999999999999987521  24566778999999999999  6999999999999999999763


Q ss_pred             --------------cc---ccceEEEEccC--CCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062          90 --------------FI---QQVNALRITPD--KQLLASAEELSCCYCGAAVFVYNSCYPAAV  132 (148)
Q Consensus        90 --------------~~---~~i~~~~~sp~--~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~  132 (148)
                                    +.   ..+.+++|+|+  +++|++++.|+      .|++||+++.+..
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg------~v~iwd~~~~~~~  147 (351)
T 3f3f_A           92 QEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDG------ILRLYDALEPSDL  147 (351)
T ss_dssp             SCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTC------EEEEEECSSTTCT
T ss_pred             cccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCC------cEEEecCCChHHh
Confidence                          22   77999999999  99999999988      9999999876543

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=99.76  E-value=3.7e-17  Score=127.25  Aligned_cols=106  Identities=15%  Similarity=0.243  Sum_probs=97.5

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..+++|+|+  +.+|++++.++.|++||+.++  +.+..+.+|...|.+++|+|+++++++++.|+.+++||+.++    
T Consensus        16 v~~i~~sp~--~~~la~~~~~g~v~iwd~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~   91 (814)
T 3mkq_A           16 VKGIDFHPT--EPWVLTTLYSGRVEIWNYETQ--VEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVV   91 (814)
T ss_dssp             EEEEEECSS--SSEEEEEETTSEEEEEETTTT--EEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEE
T ss_pred             eEEEEECCC--CCEEEEEeCCCEEEEEECCCC--ceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence            578888887  899999999999999999988  888899999999999999999999999999999999999887    


Q ss_pred             -cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          90 -FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        90 -~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                       +.   ..+.+++|+|++++|++++.|+      .|++||+.+.
T Consensus        92 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg------~i~vw~~~~~  129 (814)
T 3mkq_A           92 DFEAHPDYIRSIAVHPTKPYVLSGSDDL------TVKLWNWENN  129 (814)
T ss_dssp             EEECCSSCEEEEEECSSSSEEEEEETTS------EEEEEEGGGT
T ss_pred             EEecCCCCEEEEEEeCCCCEEEEEcCCC------EEEEEECCCC
Confidence             22   7899999999999999999988      9999998865

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=99.76  E-value=4.6e-17  Score=125.59  Aligned_cols=112  Identities=18%  Similarity=0.228  Sum_probs=97.4

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..+++|+++  +++|++|+.|++|++||+.++  ..+..+.+|...|.+++|+|+++.+++++.|+++++||....    
T Consensus       433 v~~v~~s~~--g~~l~sgs~Dg~v~vwd~~~~--~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~  508 (694)
T 3dm0_A          433 VEDVVLSSD--GQFALSGSWDGELRLWDLAAG--VSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYT  508 (694)
T ss_dssp             EEEEEECTT--SSEEEEEETTSEEEEEETTTT--EEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEE
T ss_pred             EEEEEECCC--CCEEEEEeCCCcEEEEECCCC--cceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCccee
Confidence            356777777  899999999999999999988  788899999999999999999999999999999999998654    


Q ss_pred             c----c---ccceEEEEccCC--CEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          90 F----I---QQVNALRITPDK--QLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        90 ~----~---~~i~~~~~sp~~--~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                      +    .   ..+.+++|+|++  ..+++++.|+      +|++||+++.+....+
T Consensus       509 ~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~------~v~vwd~~~~~~~~~~  557 (694)
T 3dm0_A          509 ISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDK------TVKVWNLSNCKLRSTL  557 (694)
T ss_dssp             ECSSTTSCSSCEEEEEECSCSSSCEEEEEETTS------CEEEEETTTCCEEEEE
T ss_pred             eccCCCCCCCcEEEEEEeCCCCcceEEEEeCCC------eEEEEECCCCcEEEEE
Confidence            1    1   568999999986  5899999988      9999999876655444

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=99.75  E-value=1.3e-17  Score=122.31  Aligned_cols=107  Identities=21%  Similarity=0.296  Sum_probs=92.8

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCC-EEEEEeCCCcEEEEECCcc----
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGK-WMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~~~~~i~l~d~~~~----   89 (148)
                      .+++|+++  +.+|++|+.|+.|++||++..   .+..+.+|...|.+++|+|++. ++++++.|+.+++||++..    
T Consensus       213 ~~~~~~~~--~~~l~~g~~dg~i~~wd~~~~---~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~  287 (435)
T 4e54_B          213 CSLDVSAS--SRMVVTGDNVGNVILLNMDGK---ELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKA  287 (435)
T ss_dssp             CCEEEETT--TTEEEEECSSSBEEEEESSSC---BCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSS
T ss_pred             EEEEECCC--CCEEEEEeCCCcEeeeccCcc---eeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccc
Confidence            35677776  899999999999999999754   6777889999999999999876 7889999999999999875    


Q ss_pred             -cc------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062          90 -FI------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV  132 (148)
Q Consensus        90 -~~------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~  132 (148)
                       +.      ..|.+++|+|++++|++++.|+      .|++||+.+...+
T Consensus       288 ~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~------~i~iwd~~~~~~~  331 (435)
T 4e54_B          288 SFLYSLPHRHPVNAACFSPDGARLLTTDQKS------EIRVYSASQWDCP  331 (435)
T ss_dssp             CCSBCCBCSSCEEECCBCTTSSEEEEEESSS------CEEEEESSSSSSE
T ss_pred             eEEEeeeccccccceeECCCCCeeEEEcCCC------EEEEEECCCCccc
Confidence             21      6799999999999999999988      9999999876544

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=99.75  E-value=6.3e-17  Score=124.83  Aligned_cols=116  Identities=18%  Similarity=0.310  Sum_probs=95.3

Q ss_pred             ceeeecC--cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCC---CceEEecCCCCCEEEEEEccCCCEEEEEeCCCcE
Q psy7062           7 GILTAFG--QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNP---NPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRA   81 (148)
Q Consensus         7 ~~~~~~~--~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~---~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i   81 (148)
                      +.++.|.  ..+++|+++ .+++|++|+.|++|++||+.....   .....+.+|...|.+++|+|+++++++++.|++|
T Consensus       376 ~~l~~H~~~V~~v~~~~~-~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v  454 (694)
T 3dm0_A          376 GTMRAHTDMVTAIATPID-NADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGEL  454 (694)
T ss_dssp             EEEECCSSCEEEEECCTT-CCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred             hhcccCCceeEEEEecCC-CCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcE
Confidence            3444554  345555554 368999999999999999976421   2346788999999999999999999999999999


Q ss_pred             EEEECCcc-----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          82 RIWDLSLC-----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        82 ~l~d~~~~-----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                      ++||+.++     +.   ..|.+++|+|+++.|++++.|+      +|++||....
T Consensus       455 ~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~------~i~iwd~~~~  504 (694)
T 3dm0_A          455 RLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDR------TIKLWNTLGE  504 (694)
T ss_dssp             EEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTS------CEEEECTTSC
T ss_pred             EEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCC------EEEEEECCCC
Confidence            99999887     32   7899999999999999999998      9999997643

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=99.75  E-value=4.2e-17  Score=116.18  Aligned_cols=109  Identities=15%  Similarity=0.234  Sum_probs=97.1

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCC--ceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPN--PVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~--~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-   89 (148)
                      ...+++|+++  +++|++++.|+.|++||++++  +  .+..+.+|...|.+++|+|+++++++++.|+.+++||+.+. 
T Consensus        10 ~i~~~~~s~~--~~~l~~~~~d~~v~i~~~~~~--~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~   85 (372)
T 1k8k_C           10 PISCHAWNKD--RTQIAICPNNHEVHIYEKSGN--KWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRT   85 (372)
T ss_dssp             CCCEEEECTT--SSEEEEECSSSEEEEEEEETT--EEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTE
T ss_pred             CeEEEEECCC--CCEEEEEeCCCEEEEEeCCCC--cEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCe
Confidence            3578888887  899999889999999999987  5  78888899999999999999999999999999999999765 


Q ss_pred             ----c--c---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          90 ----F--I---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        90 ----~--~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                          +  .   ..+.+++|+|++++|++++.|+      .|++||+.....
T Consensus        86 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~------~v~i~d~~~~~~  130 (372)
T 1k8k_C           86 WKPTLVILRINRAARCVRWAPNEKKFAVGSGSR------VISICYFEQEND  130 (372)
T ss_dssp             EEEEEECCCCSSCEEEEEECTTSSEEEEEETTS------SEEEEEEETTTT
T ss_pred             eeeeEEeecCCCceeEEEECCCCCEEEEEeCCC------EEEEEEecCCCc
Confidence                1  1   7799999999999999999988      899999887653

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=99.75  E-value=9.2e-17  Score=115.46  Aligned_cols=109  Identities=17%  Similarity=0.213  Sum_probs=96.2

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCC-EEEEEeCCCcEEEEECCc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGK-WMFTGGEDCRARIWDLSL----   88 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~~~~~i~l~d~~~----   88 (148)
                      ..+++|+++  +.+|++++.|+.|++||++ +  +.+..+.+|...|.+++|+|+++ .+++++.|+.+++||+++    
T Consensus       166 v~~~~~~~~--~~~l~~~~~d~~i~i~d~~-~--~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~  240 (383)
T 3ei3_B          166 YCCVDVSVS--RQMLATGDSTGRLLLLGLD-G--HEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDK  240 (383)
T ss_dssp             EEEEEEETT--TTEEEEEETTSEEEEEETT-S--CEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCST
T ss_pred             eEEEEECCC--CCEEEEECCCCCEEEEECC-C--CEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcc
Confidence            467888887  8899999999999999995 4  67888889999999999999999 999999999999999987    


Q ss_pred             c-----cc--ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeecCCCccee
Q psy7062          89 C-----FI--QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNSCYPAAVV  133 (148)
Q Consensus        89 ~-----~~--~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~  133 (148)
                      .     +.  ..+.+++|+| ++++|++++.|+      .|++||+++.....
T Consensus       241 ~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~------~i~iwd~~~~~~~~  287 (383)
T 3ei3_B          241 NSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRN------EIRVYSSYDWSKPD  287 (383)
T ss_dssp             TCEEEEEECSSCEEEEEECTTTSCEEEEEESSS------EEEEEETTBTTSCS
T ss_pred             cceEEEecCCCceEEEEEcCCCCCEEEEEcCCC------cEEEEECCCCcccc
Confidence            3     22  7899999999 999999999988      99999998765543

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=99.75  E-value=1.7e-18  Score=124.03  Aligned_cols=109  Identities=13%  Similarity=0.158  Sum_probs=89.2

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..+++|+++  +++|++++.|+.|++||+.++..+.+..+.+|...|.+++|+|+++++++++.|+.+++||+.+.    
T Consensus        14 v~~~~~s~~--g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~   91 (377)
T 3dwl_C           14 SYEHAFNSQ--RTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWK   91 (377)
T ss_dssp             CSCCEECSS--SSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCC
T ss_pred             EEEEEECCC--CCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCcee
Confidence            568888887  88999988999999999987522356677889999999999999999999999999999999764    


Q ss_pred             ----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 ----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 ----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                          +.   ..+.+++|+|+++.|++++.|+      .|++||+...+
T Consensus        92 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~------~i~iwd~~~~~  133 (377)
T 3dwl_C           92 QTLVLLRLNRAATFVRWSPNEDKFAVGSGAR------VISVCYFEQEN  133 (377)
T ss_dssp             CEEECCCCSSCEEEEECCTTSSCCEEEESSS------CEEECCC----
T ss_pred             eeeEecccCCceEEEEECCCCCEEEEEecCC------eEEEEEECCcc
Confidence                21   7899999999999999999988      89999998765

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=99.75  E-value=1.9e-16  Score=111.56  Aligned_cols=111  Identities=19%  Similarity=0.328  Sum_probs=93.9

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCC---CceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNP---NPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~---~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-   89 (148)
                      ..+++|+|+. +++|++|+.|++|++||+.....   .+...+.+|...|.+++|+|+++++++++.|+.+++|+.... 
T Consensus        41 V~~v~~sp~~-~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~  119 (340)
T 4aow_A           41 VTQIATTPQF-PDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGT  119 (340)
T ss_dssp             EEEEEECTTC-TTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred             EEEEEEeCCC-CCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccc
Confidence            4678888763 68999999999999999986521   235677889999999999999999999999999999999887 


Q ss_pred             ----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          90 ----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        90 ----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                          ..   ..+....++++++.|++++.|+      .+++||......
T Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~------~~~~~d~~~~~~  162 (340)
T 4aow_A          120 TTRRFVGHTKDVLSVAFSSDNRQIVSGSRDK------TIKLWNTLGVCK  162 (340)
T ss_dssp             EEEEEECCSSCEEEEEECTTSSCEEEEETTS------CEEEECTTSCEE
T ss_pred             eeeeecCCCCceeEEEEeecCccceeecCCC------eEEEEEeCCCce
Confidence                11   6778888999999999999988      899999875543

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=99.74  E-value=2e-16  Score=111.06  Aligned_cols=112  Identities=14%  Similarity=0.145  Sum_probs=96.9

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..+++|+++  +++|++++.|+.+++||++++.......+..|...+.+++|+|+++.+++++.++.+++||+++.    
T Consensus       100 v~~~~~~~~--~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~  177 (337)
T 1gxr_A          100 IRSCKLLPD--GCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVR  177 (337)
T ss_dssp             EEEEEECTT--SSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred             EEEEEEcCC--CCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceee
Confidence            467788886  88999999999999999998732356777889999999999999999999999999999999887    


Q ss_pred             -cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCccee
Q psy7062          90 -FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVV  133 (148)
Q Consensus        90 -~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~  133 (148)
                       +.   ..+.+++|+|+++.|++++.|+      .|++||+++.+...
T Consensus       178 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg------~i~~~d~~~~~~~~  219 (337)
T 1gxr_A          178 QFQGHTDGASCIDISNDGTKLWTGGLDN------TVRSWDLREGRQLQ  219 (337)
T ss_dssp             EECCCSSCEEEEEECTTSSEEEEEETTS------EEEEEETTTTEEEE
T ss_pred             eeecccCceEEEEECCCCCEEEEEecCC------cEEEEECCCCceEe
Confidence             22   7799999999999999999988      99999998766543

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=99.74  E-value=9.8e-17  Score=115.04  Aligned_cols=97  Identities=12%  Similarity=0.127  Sum_probs=83.2

Q ss_pred             cEEEE--EecCCeEEEEeCCCCCCC---------------c-eEEecCCCCCEEEEEEccCCCEEEEEeCCCc-EEEEEC
Q psy7062          26 EMVAA--LGGYQHIRMYDFGSNNPN---------------P-VINCEGVSKNVVEVGFQEDGKWMFTGGEDCR-ARIWDL   86 (148)
Q Consensus        26 ~~l~~--~~~d~~v~~~d~~~~~~~---------------~-~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~-i~l~d~   86 (148)
                      .+++.  |+.++.|++||++++  .               + +..+.+|...|.+++|+|+|+++++++.|++ +++||+
T Consensus       148 ~~la~~sg~~~g~v~iwd~~~~--~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~  225 (355)
T 3vu4_A          148 GLLVYSNEFNLGQIHITKLQSS--GSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKT  225 (355)
T ss_dssp             TEEEEEESSCTTCEEEEECCC--------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEET
T ss_pred             cEEEEeCCCcCcEEEEEECCCC--CccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEEC
Confidence            34454  578899999999975  3               1 6788899999999999999999999999998 999999


Q ss_pred             Ccc-----cc-----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          87 SLC-----FI-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        87 ~~~-----~~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                      +++     +.     ..+.+++|+|++++|++++.|+      +|++||++...
T Consensus       226 ~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~------~v~iw~~~~~~  273 (355)
T 3vu4_A          226 EDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKW------TLHVFEIFNDQ  273 (355)
T ss_dssp             TTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTC------EEEEEESSCCS
T ss_pred             CCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCC------EEEEEEccCCC
Confidence            977     22     6799999999999999999988      99999997653

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=99.74  E-value=1.2e-16  Score=113.66  Aligned_cols=106  Identities=15%  Similarity=0.198  Sum_probs=89.0

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCce-EEecC-CCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPV-INCEG-VSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~-~~~~~-~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--   89 (148)
                      ..+++|+|+  +.+|++|+.|+.|++||++++  +.+ ..+.. |...|.+++|+|++.++++++ ++.+++||+++.  
T Consensus       173 i~~~~~~pd--g~~lasg~~dg~i~iwd~~~~--~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~  247 (343)
T 3lrv_A          173 YSSGVLHKD--SLLLALYSPDGILDVYNLSSP--DQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVG  247 (343)
T ss_dssp             CCEEEECTT--SCEEEEECTTSCEEEEESSCT--TSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTT
T ss_pred             eEEEEECCC--CCEEEEEcCCCEEEEEECCCC--CCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCc
Confidence            467888887  899999999999999999998  655 77777 999999999999999999999 559999999887  


Q ss_pred             ---cc------ccc--eEEEEccCCCEEEEEec-CCceecCeeEEEeecCCCc
Q psy7062          90 ---FI------QQV--NALRITPDKQLLASAEE-LSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 ---~~------~~i--~~~~~sp~~~~l~~~~~-d~~~~~~~~i~~~d~~~~~  130 (148)
                         +.      ..+  .+++|+|++++|++++. |+      .+++|++....
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~------~i~v~~~~~~~  294 (343)
T 3lrv_A          248 TLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESN------SLTIYKFDKKT  294 (343)
T ss_dssp             CBSSCCCBC-----CCEEEEECTTSSEEEEEETTTT------EEEEEEECTTT
T ss_pred             ceeecccccccccccceEEEECCCCCEEEEecCCCC------cEEEEEEcccc
Confidence               11      222  35999999999999887 77      89999986543

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.74  E-value=8.8e-17  Score=121.06  Aligned_cols=111  Identities=13%  Similarity=0.009  Sum_probs=91.2

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEE--EEccCC-CEEEEEeCCCcEEEEECCcc-
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEV--GFQEDG-KWMFTGGEDCRARIWDLSLC-   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~--~~sp~~-~~l~~~~~~~~i~l~d~~~~-   89 (148)
                      ..+++|+++   ..|++|+.|++|++||++++ ..+...+.+|...|.++  .++|++ .++++++.|+++++||+++. 
T Consensus       269 v~sv~~s~~---~~lasgs~DgtV~lWD~~~~-~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~  344 (524)
T 2j04_B          269 ITTFDFLSP---TTVVCGFKNGFVAEFDLTDP-EVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIA  344 (524)
T ss_dssp             EEEEEESSS---SEEEEEETTSEEEEEETTBC-SSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHH
T ss_pred             EEEEEecCC---CeEEEEeCCCEEEEEECCCC-CCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCC
Confidence            356777653   47899999999999999875 13456688899999999  568888 89999999999999999876 


Q ss_pred             ----cc-----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceec
Q psy7062          90 ----FI-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVA  134 (148)
Q Consensus        90 ----~~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~  134 (148)
                          +.     ..+.+++|+|+++.+++++.|+      +|++||++.......
T Consensus       345 ~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~------tv~lwd~~~~~~~~~  392 (524)
T 2j04_B          345 TTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGAS------SLRAVPSRAAFAVHP  392 (524)
T ss_dssp             HHCEEEEECSCCSCCCEEEETTTTEEEEECSSS------EEEEEETTCTTCCEE
T ss_pred             cccccccccccCcccceEeCCCcCeEEEeCCCC------cEEEEECccccccee
Confidence                22     2478999999999999999877      899999987665443

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=99.74  E-value=1.6e-17  Score=120.56  Aligned_cols=100  Identities=13%  Similarity=0.210  Sum_probs=85.0

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCc-----eEEecCCCCCEEEEEEcc--------CCCEEEEEeCCCcEEEEECCcc--
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNP-----VINCEGVSKNVVEVGFQE--------DGKWMFTGGEDCRARIWDLSLC--   89 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~-----~~~~~~~~~~i~~~~~sp--------~~~~l~~~~~~~~i~l~d~~~~--   89 (148)
                      +.+|++++.|++|++||.+++  +.     +..+.+|...|.+++|+|        |+++|++++.|+++++||+++.  
T Consensus       101 ~~~las~~~d~~v~lw~~~~~--~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~  178 (393)
T 4gq1_A          101 SLFLACVCQDNTVRLIITKNE--TIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGP  178 (393)
T ss_dssp             EEEEEEEETTSCEEEEEEETT--EEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEE
T ss_pred             CCEEEEEeCCCcEEEEECCCC--ccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCce
Confidence            678999999999999999886  33     234678999999999998        8899999999999999999765  


Q ss_pred             ----cc--ccceEEEEccCC-CEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062          90 ----FI--QQVNALRITPDK-QLLASAEELSCCYCGAAVFVYNSCYPAAV  132 (148)
Q Consensus        90 ----~~--~~i~~~~~sp~~-~~l~~~~~d~~~~~~~~i~~~d~~~~~~~  132 (148)
                          +.  .++.+++|+|++ .+|++++.|+      +|++||+++.+..
T Consensus       179 ~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~------~v~~wd~~t~~~~  222 (393)
T 4gq1_A          179 ILAGYPLSSPGISVQFRPSNPNQLIVGERNG------NIRIFDWTLNLSA  222 (393)
T ss_dssp             EEEEEECSSCEEEEEEETTEEEEEEEEETTS------EEEEEETTCCC--
T ss_pred             eeeecCCCCCcEEEEECCCCCceEEecCCCC------EEEEEECCCCccc
Confidence                22  889999999977 4899999988      9999999876543

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=99.73  E-value=8.4e-17  Score=121.34  Aligned_cols=104  Identities=15%  Similarity=0.141  Sum_probs=93.8

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecC-CCCCEEEEEEcc----------CCCEEEEEeCCCcEE
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEG-VSKNVVEVGFQE----------DGKWMFTGGEDCRAR   82 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~-~~~~i~~~~~sp----------~~~~l~~~~~~~~i~   82 (148)
                      ..+++|+++  +++|++++.|+.+++||++++  +.+..+.+ |...|++++|+|          +++++++++.|+.++
T Consensus       491 v~~~~~s~~--g~~l~~~~~dg~i~iw~~~~~--~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~  566 (615)
T 1pgu_A          491 PSYISISPS--ETYIAAGDVMGKILLYDLQSR--EVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIF  566 (615)
T ss_dssp             EEEEEECTT--SSEEEEEETTSCEEEEETTTT--EEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEE
T ss_pred             eEEEEECCC--CCEEEEcCCCCeEEEeeCCCC--cceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEE
Confidence            467778887  899999999999999999988  78888887 999999999999          999999999999999


Q ss_pred             EEECCcc------cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062          83 IWDLSLC------FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        83 l~d~~~~------~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                      +||+.+.      +.   ..+.+++|+|+++ |++++.|+      .|++||+..
T Consensus       567 iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~------~v~iw~~~~  614 (615)
T 1pgu_A          567 IYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADA------CIKRWNVVL  614 (615)
T ss_dssp             EEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTS------CEEEEEEC-
T ss_pred             EEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCc------eEEEEeeec
Confidence            9999875      22   7899999999999 99999988      999999864

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=99.73  E-value=3e-16  Score=110.14  Aligned_cols=107  Identities=22%  Similarity=0.298  Sum_probs=96.3

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----   89 (148)
                      .+++|+++  ++++++++.|+.+++||++++  +.+..+..|...+.+++|+|+++.+++++.|+.+++||+++.     
T Consensus       145 ~~~~~~~~--~~~l~~~~~dg~v~~~d~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~  220 (337)
T 1gxr_A          145 YALAISPD--SKVCFSCCSDGNIAVWDLHNQ--TLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQ  220 (337)
T ss_dssp             EEEEECTT--SSEEEEEETTSCEEEEETTTT--EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred             EEEEECCC--CCEEEEEeCCCcEEEEeCCCC--ceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEee
Confidence            56777776  889999999999999999988  888889899999999999999999999999999999999887     


Q ss_pred             cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          90 FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        90 ~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                      +.  ..+.+++|+|+++.+++++.++      .|++||+.....
T Consensus       221 ~~~~~~v~~~~~s~~~~~l~~~~~~~------~i~~~~~~~~~~  258 (337)
T 1gxr_A          221 HDFTSQIFSLGYCPTGEWLAVGMESS------NVEVLHVNKPDK  258 (337)
T ss_dssp             EECSSCEEEEEECTTSSEEEEEETTS------CEEEEETTSSCE
T ss_pred             ecCCCceEEEEECCCCCEEEEEcCCC------cEEEEECCCCCe
Confidence            22  7899999999999999999988      899999987654

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=99.73  E-value=1.7e-16  Score=114.21  Aligned_cols=106  Identities=15%  Similarity=0.175  Sum_probs=94.0

Q ss_pred             cEEEEEeCCCCccEEEEEecC---CeEEEEeCCCCCCCceEEecC-------------CCCCEEEEEEccCCCEEEEEeC
Q psy7062          14 QISTVFDSKHLVEMVAALGGY---QHIRMYDFGSNNPNPVINCEG-------------VSKNVVEVGFQEDGKWMFTGGE   77 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d---~~v~~~d~~~~~~~~~~~~~~-------------~~~~i~~~~~sp~~~~l~~~~~   77 (148)
                      ..+++|+++  +.+|++++.|   +.|++||++++  +.+..+..             |...|.+++|+|+++++++++.
T Consensus       236 i~~i~~~~~--~~~l~~~~~d~~~g~i~i~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  311 (397)
T 1sq9_A          236 IRSVKFSPQ--GSLLAIAHDSNSFGCITLYETEFG--ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGW  311 (397)
T ss_dssp             EEEEEECSS--TTEEEEEEEETTEEEEEEEETTTC--CEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEET
T ss_pred             cceEEECCC--CCEEEEEecCCCCceEEEEECCCC--cccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeC
Confidence            467788887  8899999999   99999999988  88888888             9999999999999999999999


Q ss_pred             CCcEEEEECCcc-----c------------------------cccceEEEEccCC----------CEEEEEecCCceecC
Q psy7062          78 DCRARIWDLSLC-----F------------------------IQQVNALRITPDK----------QLLASAEELSCCYCG  118 (148)
Q Consensus        78 ~~~i~l~d~~~~-----~------------------------~~~i~~~~~sp~~----------~~l~~~~~d~~~~~~  118 (148)
                      |+.+++||+++.     +                        ...+.+++|+|++          ++|++++.|+     
T Consensus       312 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg-----  386 (397)
T 1sq9_A          312 DGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDR-----  386 (397)
T ss_dssp             TSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTT-----
T ss_pred             CCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCC-----
Confidence            999999999876     2                        2348899999998          7999999988     


Q ss_pred             eeEEEeecCCC
Q psy7062         119 AAVFVYNSCYP  129 (148)
Q Consensus       119 ~~i~~~d~~~~  129 (148)
                       .|++||+.+.
T Consensus       387 -~i~iw~~~~g  396 (397)
T 1sq9_A          387 -SIRWFREAGG  396 (397)
T ss_dssp             -EEEEEEEEC-
T ss_pred             -cEEEEEcCCC
Confidence             9999998754

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=99.73  E-value=8.6e-17  Score=115.34  Aligned_cols=107  Identities=12%  Similarity=0.160  Sum_probs=92.4

Q ss_pred             cEEEEEeCCCCccEEEEEecCCe-EEEEeCCCCCCCceEEec-C-CCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQH-IRMYDFGSNNPNPVINCE-G-VSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~-v~~~d~~~~~~~~~~~~~-~-~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-   89 (148)
                      ..+++|+|+  +.+|++|+.|++ |++||++++  +.+..+. + |...|.+++|+|+++++++++.|+++++||++.. 
T Consensus       198 v~~~~~s~~--g~~l~s~s~d~~~v~iwd~~~~--~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~  273 (355)
T 3vu4_A          198 IKMVRLNRK--SDMVATCSQDGTIIRVFKTEDG--VLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQ  273 (355)
T ss_dssp             EEEEEECTT--SSEEEEEETTCSEEEEEETTTC--CEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCS
T ss_pred             eEEEEECCC--CCEEEEEeCCCCEEEEEECCCC--cEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCC
Confidence            467888887  899999999998 999999998  8888887 5 9999999999999999999999999999999654 


Q ss_pred             ------cc------------------------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 ------FI------------------------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 ------~~------------------------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                            +.                        .....++|+++++.+++++.||      .+++|++....
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg------~~~~~~~~~~~  338 (355)
T 3vu4_A          274 DNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTR------MIETFKVVFDD  338 (355)
T ss_dssp             CCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTT------EEEEEEEEEET
T ss_pred             CcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCC------eEEEEEEEcCC
Confidence                  10                        1126789999999999999988      89999987544

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=99.73  E-value=4.2e-17  Score=116.80  Aligned_cols=108  Identities=16%  Similarity=0.195  Sum_probs=89.7

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCC---ceEEecC-CCCCEEEEEEccCCCEEEEEeCCCcEEEEECCc-
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPN---PVINCEG-VSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSL-   88 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~---~~~~~~~-~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~-   88 (148)
                      ..+++|+++  +++|++++.|+.|++||+++.  +   ....+.. |...|.+++|+|+++++++++.|+.+++||++. 
T Consensus       103 v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~--~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~  178 (377)
T 3dwl_C          103 ATFVRWSPN--EDKFAVGSGARVISVCYFEQE--NDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVR  178 (377)
T ss_dssp             EEEEECCTT--SSCCEEEESSSCEEECCC-------CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCS
T ss_pred             eEEEEECCC--CCEEEEEecCCeEEEEEECCc--ccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEec
Confidence            456777776  889999999999999999987  4   4677777 999999999999999999999999999999852 


Q ss_pred             -----------------c-----cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          89 -----------------C-----FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        89 -----------------~-----~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                                       .     +.  ..+.+++|+|++++|++++.|+      .|++||+.+...
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~------~i~iwd~~~~~~  239 (377)
T 3dwl_C          179 DVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDS------SVTIAYPSAPEQ  239 (377)
T ss_dssp             SCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTT------EEC-CEECSTTS
T ss_pred             ccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCC------cEEEEECCCCCC
Confidence                             1     12  6699999999999999999988      999999987765

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=99.73  E-value=1.1e-16  Score=114.11  Aligned_cols=109  Identities=17%  Similarity=0.182  Sum_probs=94.9

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccC--CCEEEEEeCCCcEEEEECCcc--
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQED--GKWMFTGGEDCRARIWDLSLC--   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~--~~~l~~~~~~~~i~l~d~~~~--   89 (148)
                      ..+++|+++  +++|++++.|+.|++||+.....+.+..+.+|...|.+++|+|+  +.++++++.|+.+++||+++.  
T Consensus        14 v~~~~~s~~--~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~   91 (379)
T 3jrp_A           14 IHDAVLDYY--GKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRW   91 (379)
T ss_dssp             EEEEEECSS--SSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEE
T ss_pred             EEEEEEcCC--CCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCce
Confidence            467778877  88999999999999999984322667788899999999999977  999999999999999999876  


Q ss_pred             -----cc---ccceEEEEccC--CCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 -----FI---QQVNALRITPD--KQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 -----~~---~~i~~~~~sp~--~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                           +.   ..+.+++|+|+  ++.|++++.|+      .|++||++...
T Consensus        92 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~------~i~v~d~~~~~  136 (379)
T 3jrp_A           92 SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDG------KVSVVEFKENG  136 (379)
T ss_dssp             EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS------EEEEEECCTTS
T ss_pred             eEeeeecCCCcceEEEEeCCCCCCCEEEEecCCC------cEEEEecCCCC
Confidence                 21   78999999998  99999999988      99999998763

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=99.73  E-value=1.3e-16  Score=111.93  Aligned_cols=116  Identities=20%  Similarity=0.235  Sum_probs=93.8

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCC----------------------------------------------
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNP----------------------------------------------   47 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~----------------------------------------------   47 (148)
                      ..+++|+++..+.++++++.|+.|++||++++..                                              
T Consensus       113 v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~  192 (351)
T 3f3f_A          113 LYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQ  192 (351)
T ss_dssp             EEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTE
T ss_pred             eeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCC
Confidence            3566777764478889989999999999875421                                              


Q ss_pred             ------------CceEEecCCCCCEEEEEEccCC----CEEEEEeCCCcEEEEECCcc----------------------
Q psy7062          48 ------------NPVINCEGVSKNVVEVGFQEDG----KWMFTGGEDCRARIWDLSLC----------------------   89 (148)
Q Consensus        48 ------------~~~~~~~~~~~~i~~~~~sp~~----~~l~~~~~~~~i~l~d~~~~----------------------   89 (148)
                                  ..+..+.+|...|.+++|+|++    +++++++.|+.+++||++..                      
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (351)
T 3f3f_A          193 AIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADV  272 (351)
T ss_dssp             EEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------
T ss_pred             cEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCccc
Confidence                        0144566789999999999998    89999999999999999761                      


Q ss_pred             -----------------------------cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          90 -----------------------------FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        90 -----------------------------~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                                                   +.   ..+.+++|+|++++|++++.|+      .|++||+.+.+....+
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg------~v~iw~~~~~~~~~~~  344 (351)
T 3f3f_A          273 DMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDG------KVRLWKATYSNEFKCM  344 (351)
T ss_dssp             ------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTS------CEEEEEECTTSCEEEE
T ss_pred             ccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCC------cEEEEecCcCcchhhe
Confidence                                         11   6799999999999999999988      9999999977655443

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=99.73  E-value=2.8e-16  Score=112.95  Aligned_cols=104  Identities=14%  Similarity=0.203  Sum_probs=91.0

Q ss_pred             cEEEEEeCCCCc-cEEEEEecCCeEEEEeCCCCCCCceEEec--CCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEECCcc
Q psy7062          14 QISTVFDSKHLV-EMVAALGGYQHIRMYDFGSNNPNPVINCE--GVSKNVVEVGFQE-DGKWMFTGGEDCRARIWDLSLC   89 (148)
Q Consensus        14 ~~~~~~~~~~~~-~~l~~~~~d~~v~~~d~~~~~~~~~~~~~--~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d~~~~   89 (148)
                      ..+++|+++  + ++|++++.|+.|++||+.++  +....+.  +|...|.+++|+| ++..+++++.|+.+++||++..
T Consensus        76 v~~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~--~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~  151 (383)
T 3ei3_B           76 VTSLEWHPT--HPTTVAVGSKGGDIILWDYDVQ--NKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGS  151 (383)
T ss_dssp             EEEEEECSS--CTTEEEEEEBTSCEEEEETTST--TCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSC
T ss_pred             EEEEEECCC--CCCEEEEEcCCCeEEEEeCCCc--ccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCC
Confidence            467888887  6 89999999999999999987  5555554  6999999999999 7899999999999999999876


Q ss_pred             ----cc------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          90 ----FI------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        90 ----~~------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                          +.      ..+.+++|+|++++|++++.|+      .|++||++
T Consensus       152 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~------~i~i~d~~  193 (383)
T 3ei3_B          152 VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTG------RLLLLGLD  193 (383)
T ss_dssp             EEEEEECCCCSSCCEEEEEEETTTTEEEEEETTS------EEEEEETT
T ss_pred             ceEEEeccCCCCCCeEEEEECCCCCEEEEECCCC------CEEEEECC
Confidence                21      5599999999999999999988      99999985

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=99.72  E-value=3.4e-16  Score=112.90  Aligned_cols=114  Identities=13%  Similarity=0.188  Sum_probs=91.8

Q ss_pred             cCcEEEEEeCCCCcc-EEEEEecCCeEEEEeC----CCCCCC------ceEEecC----------CCCCEEEEEEccCCC
Q psy7062          12 FGQISTVFDSKHLVE-MVAALGGYQHIRMYDF----GSNNPN------PVINCEG----------VSKNVVEVGFQEDGK   70 (148)
Q Consensus        12 ~~~~~~~~~~~~~~~-~l~~~~~d~~v~~~d~----~~~~~~------~~~~~~~----------~~~~i~~~~~sp~~~   70 (148)
                      ....+++|+|+  +. +|++++.|+.|++||+    .++  +      ....+..          |...|.+++|+|+++
T Consensus        46 ~~v~~~~~s~~--~~~~l~~~~~dg~i~iw~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~  121 (425)
T 1r5m_A           46 DNIVSSTWNPL--DESILAYGEKNSVARLARIVETDQEG--KKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGN  121 (425)
T ss_dssp             SCCSEEEECSS--CTTEEEEEETBTEEEEEEEEEC--------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSS
T ss_pred             CceEEEEECCC--CCcEEEEecCCceEEEEEEecccCCc--cccccccccccccccccccccccCCCCceEEEEEcCCCC
Confidence            34678899998  77 9999999999999999    877  4      3444433          577999999999999


Q ss_pred             EEEEEeCCCcEEEEECCcc----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          71 WMFTGGEDCRARIWDLSLC----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        71 ~l~~~~~~~~i~l~d~~~~----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                      ++++++.|+.+++||....    +.   ..+.+++|+|++++|++++.|+      .|++||+.+.+.....
T Consensus       122 ~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~------~i~iwd~~~~~~~~~~  187 (425)
T 1r5m_A          122 SIVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVEN------VTILWNVISGTVMQHF  187 (425)
T ss_dssp             EEEEEETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTC------CEEEEETTTTEEEEEE
T ss_pred             EEEEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEecCC------eEEEEECCCCcEEEEe
Confidence            9999999999999995443    22   7899999999999999999988      8999999877655444

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=99.72  E-value=4e-17  Score=115.22  Aligned_cols=110  Identities=11%  Similarity=0.047  Sum_probs=91.5

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccC--CCEEEEEeCCCcEEEEECCcc--
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQED--GKWMFTGGEDCRARIWDLSLC--   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~--~~~l~~~~~~~~i~l~d~~~~--   89 (148)
                      ..+++|+++..+++|++++.|++|++||++++..+.+..+.+|...|.+++|+|+  +.++++++.|+++++||++..  
T Consensus        60 V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~  139 (316)
T 3bg1_A           60 VWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQ  139 (316)
T ss_dssp             EEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSC
T ss_pred             EEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCC
Confidence            3567776654478999999999999999987633456678889999999999998  789999999999999999753  


Q ss_pred             ------cc---ccceEEEEccC-----------------CCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          90 ------FI---QQVNALRITPD-----------------KQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        90 ------~~---~~i~~~~~sp~-----------------~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                            +.   ..+.+++|+|+                 +++|++++.|+      +|++||++..
T Consensus       140 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~------~v~lWd~~~~  199 (316)
T 3bg1_A          140 WEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDN------LIKLWKEEED  199 (316)
T ss_dssp             EEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTS------BCCEEEECTT
T ss_pred             cceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCC------eEEEEEeCCC
Confidence                  11   67889999997                 46899999988      9999998754

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=99.72  E-value=5.1e-16  Score=112.63  Aligned_cols=110  Identities=15%  Similarity=0.169  Sum_probs=96.5

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..+++|+++  +.+|++++.|+.+++||++++  +.+..+.+|...|.+++|  ++..+++++.|+.+++||++..    
T Consensus       137 v~~v~~s~~--~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~  210 (401)
T 4aez_A          137 VASVKWSHD--GSFLSVGLGNGLVDIYDVESQ--TKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQI  210 (401)
T ss_dssp             EEEEEECTT--SSEEEEEETTSCEEEEETTTC--CEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEE
T ss_pred             EEEEEECCC--CCEEEEECCCCeEEEEECcCC--eEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCccee
Confidence            467888886  889999999999999999988  888899999999999999  5679999999999999999854    


Q ss_pred             --cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          90 --FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        90 --~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                        +.   ..+.+++|+|++++|++++.|+      .|++||+++.......
T Consensus       211 ~~~~~~~~~v~~~~~~~~~~~l~s~~~d~------~v~iwd~~~~~~~~~~  255 (401)
T 4aez_A          211 GTLQGHSSEVCGLAWRSDGLQLASGGNDN------VVQIWDARSSIPKFTK  255 (401)
T ss_dssp             EEEECCSSCEEEEEECTTSSEEEEEETTS------CEEEEETTCSSEEEEE
T ss_pred             eEEcCCCCCeeEEEEcCCCCEEEEEeCCC------eEEEccCCCCCccEEe
Confidence              22   7899999999999999999988      9999999876655443

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=99.72  E-value=1e-16  Score=116.99  Aligned_cols=106  Identities=11%  Similarity=0.188  Sum_probs=91.4

Q ss_pred             CCCccEEEEEecCCeEEEEeCCCCCCCceEEecC--CCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----c--c-
Q psy7062          22 KHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEG--VSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----F--I-   91 (148)
Q Consensus        22 ~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~--~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~--~-   91 (148)
                      ...+.+|++++.|+.|++||++++  +.+..+..  |...|.+++|+|+++++++++.|+.+++||++..     +  . 
T Consensus       179 ~~~~~~l~~~~~d~~i~iwd~~~~--~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~  256 (437)
T 3gre_A          179 NEEKSLLVALTNLSRVIIFDIRTL--ERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGD  256 (437)
T ss_dssp             CSSCEEEEEEETTSEEEEEETTTC--CEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTT
T ss_pred             cCCCCEEEEEeCCCeEEEEeCCCC--eeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCC
Confidence            344889999999999999999998  88888887  8899999999999999999999999999999887     2  2 


Q ss_pred             -ccceEEEEcc----CCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          92 -QQVNALRITP----DKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        92 -~~i~~~~~sp----~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                       .++.+++|+|    ++++|++++.|+      .|++||+++.+....+
T Consensus       257 ~~~v~~~~~~~~~s~~~~~l~s~~~dg------~i~iwd~~~~~~~~~~  299 (437)
T 3gre_A          257 HAPITHVEVCQFYGKNSVIVVGGSSKT------FLTIWNFVKGHCQYAF  299 (437)
T ss_dssp             CEEEEEEEECTTTCTTEEEEEEESTTE------EEEEEETTTTEEEEEE
T ss_pred             CCceEEEEeccccCCCccEEEEEcCCC------cEEEEEcCCCcEEEEE
Confidence             6788996664    677999999988      9999999877654433

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=99.72  E-value=2.3e-16  Score=109.78  Aligned_cols=106  Identities=12%  Similarity=0.129  Sum_probs=91.6

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..+++|+++  +. +++++.|+.+++||++++  +.+..+..|...|.+++|+|++ .+++++.|+.+++||+++.    
T Consensus       187 i~~~~~~~~--~~-~~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~  260 (313)
T 3odt_A          187 VRHLAVVDD--GH-FISCSNDGLIKLVDMHTG--DVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQ  260 (313)
T ss_dssp             EEEEEEEET--TE-EEEEETTSEEEEEETTTC--CEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEE
T ss_pred             EEEEEEcCC--Ce-EEEccCCCeEEEEECCch--hhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeE
Confidence            467778877  55 778899999999999988  8889999999999999999999 5889999999999999887    


Q ss_pred             -cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062          90 -FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV  132 (148)
Q Consensus        90 -~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~  132 (148)
                       +.   ..+.+++|+|+++ +++++.|+      .|++||+.+.+..
T Consensus       261 ~~~~~~~~i~~~~~~~~~~-~~~~~~dg------~i~iw~~~~~~~~  300 (313)
T 3odt_A          261 VITLPAISIWSVDCMSNGD-IIVGSSDN------LVRIFSQEKSRWA  300 (313)
T ss_dssp             EEECSSSCEEEEEECTTSC-EEEEETTS------CEEEEESCGGGCC
T ss_pred             EEeccCceEEEEEEccCCC-EEEEeCCC------cEEEEeCCCCcee
Confidence             22   6899999999998 56788888      8999999866543

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=99.72  E-value=3.6e-16  Score=126.73  Aligned_cols=112  Identities=16%  Similarity=0.282  Sum_probs=99.5

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..+++|+++  ++++++|+.|++|++||+.++  +.+..+.+|...|.+++|+|+++++++++.|+.+++||+.++    
T Consensus       618 v~~~~~s~~--~~~l~s~~~d~~i~vw~~~~~--~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~  693 (1249)
T 3sfz_A          618 VYHACFSQD--GQRIASCGADKTLQVFKAETG--EKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVH  693 (1249)
T ss_dssp             EEEEEECTT--SSEEEEEETTSCEEEEETTTC--CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred             EEEEEECCC--CCEEEEEeCCCeEEEEECCCC--CEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEE
Confidence            467788887  899999999999999999998  888999999999999999999999999999999999999887    


Q ss_pred             -cc---ccceEEEEcc--CCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          90 -FI---QQVNALRITP--DKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        90 -~~---~~i~~~~~sp--~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                       +.   ..+.+++|+|  ++..+++++.|+      .|++||+.+.......
T Consensus       694 ~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~------~v~vwd~~~~~~~~~~  739 (1249)
T 3sfz_A          694 TYDEHSEQVNCCHFTNKSNHLLLATGSNDF------FLKLWDLNQKECRNTM  739 (1249)
T ss_dssp             EEECCSSCEEEEEECSSSSCCEEEEEETTS------CEEEEETTSSSEEEEE
T ss_pred             EEcCCCCcEEEEEEecCCCceEEEEEeCCC------eEEEEECCCcchhhee
Confidence             32   7899999999  556899999988      9999999877655444

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=99.72  E-value=2.4e-16  Score=114.24  Aligned_cols=108  Identities=13%  Similarity=0.179  Sum_probs=94.2

Q ss_pred             cEEEEEeCCCCc-cEEEEEecCCeEEEEeCCCCCCCceEEe--cCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-
Q psy7062          14 QISTVFDSKHLV-EMVAALGGYQHIRMYDFGSNNPNPVINC--EGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-   89 (148)
Q Consensus        14 ~~~~~~~~~~~~-~~l~~~~~d~~v~~~d~~~~~~~~~~~~--~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-   89 (148)
                      ..+++|+++  + .+|++++.|+.|++||++++  +.+..+  ..|...|.+++|+|+++.+++++.|+.+++||++++ 
T Consensus       134 v~~~~~~p~--~~~~l~s~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~  209 (402)
T 2aq5_A          134 VGIVAWHPT--AQNVLLSAGCDNVILVWDVGTG--AAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGT  209 (402)
T ss_dssp             EEEEEECSS--BTTEEEEEETTSCEEEEETTTT--EEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTE
T ss_pred             EEEEEECcC--CCCEEEEEcCCCEEEEEECCCC--CccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCc
Confidence            467788887  5 68999999999999999988  788888  789999999999999999999999999999999887 


Q ss_pred             ----c-c----ccceEEEEccCCCEEEEE---ecCCceecCeeEEEeecCCCcc
Q psy7062          90 ----F-I----QQVNALRITPDKQLLASA---EELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        90 ----~-~----~~i~~~~~sp~~~~l~~~---~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                          + .    ..+.++.|+|++++|+++   +.|+      .|++||+++...
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~------~i~iwd~~~~~~  257 (402)
T 2aq5_A          210 VVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSER------QVALWDTKHLEE  257 (402)
T ss_dssp             EEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCE------EEEEEETTBCSS
T ss_pred             eeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCc------eEEEEcCccccC
Confidence                3 2    338899999999999998   5666      999999987554

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=99.72  E-value=2.4e-16  Score=113.33  Aligned_cols=112  Identities=13%  Similarity=0.172  Sum_probs=98.2

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecC---C---CCCEEEEEEccCCCEEEEEeCC---CcEEEE
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEG---V---SKNVVEVGFQEDGKWMFTGGED---CRARIW   84 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~---~---~~~i~~~~~sp~~~~l~~~~~~---~~i~l~   84 (148)
                      ..+++|+++  + ++++++.|+.+++||+++.  +.+..+..   |   ...+.+++|+|+++++++++.|   +.+++|
T Consensus       189 i~~~~~~~~--~-~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~  263 (397)
T 1sq9_A          189 ATSVDISER--G-LIATGFNNGTVQISELSTL--RPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLY  263 (397)
T ss_dssp             CCEEEECTT--S-EEEEECTTSEEEEEETTTT--EEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEE
T ss_pred             ceEEEECCC--c-eEEEEeCCCcEEEEECCCC--ceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEE
Confidence            567888887  6 9999999999999999988  88888888   8   9999999999999999999999   999999


Q ss_pred             ECCcc-----c---------------c-ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062          85 DLSLC-----F---------------I-QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN  136 (148)
Q Consensus        85 d~~~~-----~---------------~-~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~  136 (148)
                      |+++.     +               . ..+.+++|+|++++|++++.|+      .|++||+++.+....+.
T Consensus       264 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg------~i~iwd~~~~~~~~~~~  330 (397)
T 1sq9_A          264 ETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDG------KLRFWDVKTKERITTLN  330 (397)
T ss_dssp             ETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTS------EEEEEETTTTEEEEEEE
T ss_pred             ECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCC------eEEEEEcCCCceeEEEe
Confidence            99876     1               3 4689999999999999999988      99999998877655544

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.72  E-value=1.6e-16  Score=119.73  Aligned_cols=103  Identities=12%  Similarity=0.061  Sum_probs=87.9

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCC-----CEEEEEEccCCCEEEEEeCCCcEEEEECC
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSK-----NVVEVGFQEDGKWMFTGGEDCRARIWDLS   87 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~-----~i~~~~~sp~~~~l~~~~~~~~i~l~d~~   87 (148)
                      ...+++|+|+  |.+||+++.|++|++||.++    .+..+. |..     .+.+++|||||+++++++.||++++||+.
T Consensus        87 ~V~~vawSPd--G~~LAs~s~dg~V~iwd~~~----~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~  159 (588)
T 2j04_A           87 YPRVCKPSPI--DDWMAVLSNNGNVSVFKDNK----MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIR  159 (588)
T ss_dssp             CEEEEEECSS--SSCEEEEETTSCEEEEETTE----EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECC
T ss_pred             cEEEEEECCC--CCEEEEEeCCCcEEEEeCCc----eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECC
Confidence            3678888998  99999999999999999543    566666 654     59999999999999999999999999997


Q ss_pred             cc-c---------------c---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          88 LC-F---------------I---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        88 ~~-~---------------~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                      .+ +               .   .+|.+++|+|+|  +++++.|+      .|++||+....
T Consensus       160 ~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~------tVrlWd~~~~~  213 (588)
T 2j04_A          160 KNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNN------SVFSMTVSASS  213 (588)
T ss_dssp             CCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTC------CEEEECCCSSS
T ss_pred             CCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCC------eEEEEECCCCc
Confidence            65 2               1   489999999999  78888877      99999987655

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=99.72  E-value=3e-16  Score=111.77  Aligned_cols=112  Identities=10%  Similarity=0.088  Sum_probs=96.0

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccC--CCEEEEEeCCCcEEEEECCcc--
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQED--GKWMFTGGEDCRARIWDLSLC--   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~--~~~l~~~~~~~~i~l~d~~~~--   89 (148)
                      ..+++|+++..+.+|++++.|+.|++||++++....+..+..|...|.+++|+|+  +..+++++.|+.+++||++..  
T Consensus        58 v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~  137 (379)
T 3jrp_A           58 VWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT  137 (379)
T ss_dssp             EEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSC
T ss_pred             EEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCc
Confidence            3567777665589999999999999999998722267778889999999999999  999999999999999999876  


Q ss_pred             -----cc---ccceEEEEcc-------------CCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          90 -----FI---QQVNALRITP-------------DKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        90 -----~~---~~i~~~~~sp-------------~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                           +.   ..+.+++|+|             ++..+++++.|+      .|++||++....
T Consensus       138 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg------~i~i~d~~~~~~  194 (379)
T 3jrp_A          138 TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN------LVKIWKYNSDAQ  194 (379)
T ss_dssp             CCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTS------CEEEEEEETTTT
T ss_pred             eeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCC------eEEEEEecCCCc
Confidence                 11   7799999999             699999999988      999999986543

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=99.71  E-value=4.6e-16  Score=113.47  Aligned_cols=108  Identities=12%  Similarity=0.208  Sum_probs=89.9

Q ss_pred             cEEEEEeCCCCc-cEEEEEecCCeEEEEeCCCCCCCc----eEEecCCCC------------CEEEEEEccCCCEEEEEe
Q psy7062          14 QISTVFDSKHLV-EMVAALGGYQHIRMYDFGSNNPNP----VINCEGVSK------------NVVEVGFQEDGKWMFTGG   76 (148)
Q Consensus        14 ~~~~~~~~~~~~-~~l~~~~~d~~v~~~d~~~~~~~~----~~~~~~~~~------------~i~~~~~sp~~~~l~~~~   76 (148)
                      ..+++|+|+  + .+|++++.|+.|++||++++  +.    +..+..|..            .|.+++|+|+++++++++
T Consensus       229 v~~~~~~p~--~~~~l~s~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~  304 (447)
T 3dw8_B          229 ITAAEFHPN--SCNTFVYSSSKGTIRLCDMRAS--ALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRD  304 (447)
T ss_dssp             EEEEEECSS--CTTEEEEEETTSCEEEEETTTC--SSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEE
T ss_pred             eEEEEECCC--CCcEEEEEeCCCeEEEEECcCC--ccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEee
Confidence            567888887  6 89999999999999999987  54    677877775            899999999999999999


Q ss_pred             CCCcEEEEECCc-c-----cc--cc----------------ceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062          77 EDCRARIWDLSL-C-----FI--QQ----------------VNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV  132 (148)
Q Consensus        77 ~~~~i~l~d~~~-~-----~~--~~----------------i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~  132 (148)
                      . +.+++||++. .     +.  ..                +..++|+|++++|++++.|+      .|++||+.+.+..
T Consensus       305 ~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg------~v~iwd~~~~~~~  377 (447)
T 3dw8_B          305 Y-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNN------FFRMFDRNTKRDI  377 (447)
T ss_dssp             S-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTT------EEEEEETTTCCEE
T ss_pred             C-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCC------EEEEEEcCCCcce
Confidence            9 9999999987 4     22  21                23499999999999999988      9999999876543

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.71  E-value=2.3e-16  Score=118.77  Aligned_cols=111  Identities=11%  Similarity=0.089  Sum_probs=90.9

Q ss_pred             cEEEEEeCC----CCccEEEEEecCCeEEEEeCCCCCC---------CceEEecCCCCCEEEEEEccCCCEEEEEeCCCc
Q psy7062          14 QISTVFDSK----HLVEMVAALGGYQHIRMYDFGSNNP---------NPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCR   80 (148)
Q Consensus        14 ~~~~~~~~~----~~~~~l~~~~~d~~v~~~d~~~~~~---------~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~   80 (148)
                      ...++|+|.    ..+.+||+++.|++|++||+..+..         ++...+.+|...|++++|+|++ .+++|+.|++
T Consensus       210 V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~Dgt  288 (524)
T 2j04_B          210 VWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGF  288 (524)
T ss_dssp             EEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTSE
T ss_pred             EEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCE
Confidence            467888886    3368999999999999999986521         1234677899999999999864 7999999999


Q ss_pred             EEEEECCcc------cc---ccceEE--EEccCC-CEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          81 ARIWDLSLC------FI---QQVNAL--RITPDK-QLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        81 i~l~d~~~~------~~---~~i~~~--~~sp~~-~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                      |++||+++.      +.   ..|.++  .|+|++ ++|++++.|+      +|++||+++.+.
T Consensus       289 V~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~------tvklWD~~~~~~  345 (524)
T 2j04_B          289 VAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDG------YFYIFNPKDIAT  345 (524)
T ss_dssp             EEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTS------EEEEECGGGHHH
T ss_pred             EEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCC------eEEEEECCCCCc
Confidence            999999865      22   779998  568887 8999999999      999999986554

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=99.71  E-value=3.3e-16  Score=121.95  Aligned_cols=111  Identities=14%  Similarity=0.268  Sum_probs=98.9

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..+++|+++  +++|++++.|+.|++||++++  +.+..+.+|...|.+++|+|++..+++++.|+.+++||+.+.    
T Consensus        58 v~~~~~s~~--~~~l~~~~~dg~i~vw~~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~  133 (814)
T 3mkq_A           58 VRAGKFIAR--KNWIIVGSDDFRIRVFNYNTG--EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALE  133 (814)
T ss_dssp             EEEEEEEGG--GTEEEEEETTSEEEEEETTTC--CEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEE
T ss_pred             EEEEEEeCC--CCEEEEEeCCCeEEEEECCCC--cEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEE
Confidence            467888887  899999999999999999998  888889999999999999999999999999999999999875    


Q ss_pred             --cc---ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeecCCCcceec
Q psy7062          90 --FI---QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNSCYPAAVVA  134 (148)
Q Consensus        90 --~~---~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~  134 (148)
                        +.   ..+.+++|+| +++.+++++.|+      .|++||+........
T Consensus       134 ~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg------~v~vwd~~~~~~~~~  178 (814)
T 3mkq_A          134 QTFEGHEHFVMCVAFNPKDPSTFASGCLDR------TVKVWSLGQSTPNFT  178 (814)
T ss_dssp             EEEECCSSCEEEEEEETTEEEEEEEEETTS------EEEEEETTCSSCSEE
T ss_pred             EEEcCCCCcEEEEEEEcCCCCEEEEEeCCC------eEEEEECCCCcceeE
Confidence              22   7799999999 889999999988      999999876654433

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=99.71  E-value=6.2e-16  Score=107.94  Aligned_cols=104  Identities=19%  Similarity=0.285  Sum_probs=86.7

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEec--CCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCE--GVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~--~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---   89 (148)
                      ++++|+++   ++|++ +.|++|++||++++  +.+..+.  +|...|.+++|+|+++++++|+.|+++++||++++   
T Consensus        29 ~~l~WS~~---~~lAv-g~D~tV~iWd~~tg--~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~  102 (318)
T 4ggc_A           29 NLVDWSSG---NVLAV-ALDNSVYLWSASSG--DILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRL  102 (318)
T ss_dssp             BCEEECTT---SEEEE-EETTEEEEEETTTC--CEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred             eEEEECCC---CEEEE-EeCCEEEEEECCCC--CEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeE
Confidence            56888865   47887 56999999999998  6666554  67788999999999999999999999999999765   


Q ss_pred             -------------------------------------------cc---ccceEEEEccCCCEEEEEecCCceecCeeEEE
Q psy7062          90 -------------------------------------------FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFV  123 (148)
Q Consensus        90 -------------------------------------------~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~  123 (148)
                                                                 +.   ..+..+.++++++++++++.|+      .|++
T Consensus       103 ~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~------~i~i  176 (318)
T 4ggc_A          103 RNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDN------LVNV  176 (318)
T ss_dssp             EEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS------CEEE
T ss_pred             EEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCc------ceeE
Confidence                                                       00   4466778899999999999988      9999


Q ss_pred             eecCCCc
Q psy7062         124 YNSCYPA  130 (148)
Q Consensus       124 ~d~~~~~  130 (148)
                      ||+++.+
T Consensus       177 wd~~~~~  183 (318)
T 4ggc_A          177 WPSAPGE  183 (318)
T ss_dssp             EESSCBT
T ss_pred             EECCCCc
Confidence            9998654

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=99.71  E-value=3.7e-16  Score=112.70  Aligned_cols=106  Identities=22%  Similarity=0.214  Sum_probs=95.2

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..+++|+++  +++|++++.|+.+++||++++  +.+..+..|...+.+++|+|++ .+++++.|+.+++||+++.    
T Consensus       250 i~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~--~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~  324 (425)
T 1r5m_A          250 ISVLEFNDT--NKLLLSASDDGTLRIWHGGNG--NSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLA  324 (425)
T ss_dssp             EEEEEEETT--TTEEEEEETTSCEEEECSSSB--SCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEE
T ss_pred             eEEEEECCC--CCEEEEEcCCCEEEEEECCCC--ccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeE
Confidence            457788887  789999999999999999988  7888888899999999999999 9999999999999999887    


Q ss_pred             -cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 -FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 -~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                       +.   ..+.+++|+|++++|++++.|+      .|++||+.+..
T Consensus       325 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg------~i~i~~~~~~~  363 (425)
T 1r5m_A          325 LSIVDGVPIFAGRISQDGQKYAVAFMDG------QVNVYDLKKLN  363 (425)
T ss_dssp             EEECTTCCEEEEEECTTSSEEEEEETTS------CEEEEECHHHH
T ss_pred             ecccCCccEEEEEEcCCCCEEEEEECCC------eEEEEECCCCc
Confidence             22   7899999999999999999988      89999988655

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=99.71  E-value=6.9e-16  Score=113.51  Aligned_cols=111  Identities=12%  Similarity=0.085  Sum_probs=95.1

Q ss_pred             cEEEEEeCCCCccEE-EEEecCCeEEEEeCC--CCCCCceEEec--CCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCc
Q psy7062          14 QISTVFDSKHLVEMV-AALGGYQHIRMYDFG--SNNPNPVINCE--GVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSL   88 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l-~~~~~d~~v~~~d~~--~~~~~~~~~~~--~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~   88 (148)
                      ..+++|+++  +++| ++++.|+.|++||+.  ++  +.+..+.  .|...|.+++|+|+++++++++.++.+++|++..
T Consensus       105 v~~~~~s~d--~~~l~~~~~~dg~v~iwd~~~~~~--~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~  180 (450)
T 2vdu_B          105 IRNLRLTSD--ESRLIACADSDKSLLVFDVDKTSK--NVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINS  180 (450)
T ss_dssp             EEEEEECTT--SSEEEEEEGGGTEEEEEEECSSSS--SCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTS
T ss_pred             eEEEEEcCC--CCEEEEEECCCCeEEEEECcCCCC--ceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCC
Confidence            567888887  7775 888899999999999  66  6677665  5678999999999999999999999999999876


Q ss_pred             c---------cc---ccceEEEEccC---CCEEEEEecCCceecCeeEEEeecCCCcceec
Q psy7062          89 C---------FI---QQVNALRITPD---KQLLASAEELSCCYCGAAVFVYNSCYPAAVVA  134 (148)
Q Consensus        89 ~---------~~---~~i~~~~~sp~---~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~  134 (148)
                      .         +.   ..+.+++|+|+   +++|++++.|+      +|++||+++...+..
T Consensus       181 ~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~------~i~vwd~~~~~~~~~  235 (450)
T 2vdu_B          181 IPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDE------HIKISHYPQCFIVDK  235 (450)
T ss_dssp             CCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTS------CEEEEEESCTTCEEE
T ss_pred             cccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCC------cEEEEECCCCceeee
Confidence            5         11   77999999999   99999999988      999999987766554

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=99.71  E-value=2.7e-16  Score=124.89  Aligned_cols=104  Identities=11%  Similarity=0.094  Sum_probs=90.5

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCC-------------------------------------------Cce
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNP-------------------------------------------NPV   50 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~-------------------------------------------~~~   50 (148)
                      ..+++|+|+  +++||+|+.|++|++||+.+++.                                           +++
T Consensus       491 V~svafspd--g~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  568 (902)
T 2oaj_A          491 VDKISFAAE--TLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPS  568 (902)
T ss_dssp             EEEEEEETT--TTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEE
T ss_pred             eeEEEecCC--CCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCcccee
Confidence            578899998  89999999999999999986510                                           125


Q ss_pred             EEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----------c--c--ccceEEEEc-----cCC---CEEEE
Q psy7062          51 INCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----------F--I--QQVNALRIT-----PDK---QLLAS  108 (148)
Q Consensus        51 ~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----------~--~--~~i~~~~~s-----p~~---~~l~~  108 (148)
                      ..+.+|...|++++|+||| ++++|+.|++|++||++..          +  .  ..|++++|+     |||   ++|++
T Consensus       569 ~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~s  647 (902)
T 2oaj_A          569 TAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVC  647 (902)
T ss_dssp             EEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEE
T ss_pred             EEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEE
Confidence            6778899999999999999 9999999999999999875          1  1  459999999     885   89999


Q ss_pred             EecCCceecCeeEEEeec
Q psy7062         109 AEELSCCYCGAAVFVYNS  126 (148)
Q Consensus       109 ~~~d~~~~~~~~i~~~d~  126 (148)
                      ++.|+      +|++||+
T Consensus       648 gs~D~------tv~~wd~  659 (902)
T 2oaj_A          648 GTDMG------EVITYKI  659 (902)
T ss_dssp             EETTS------EEEEEEE
T ss_pred             EecCC------cEEEEEE
Confidence            99998      9999998

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=99.70  E-value=1e-16  Score=113.42  Aligned_cols=109  Identities=18%  Similarity=0.230  Sum_probs=89.6

Q ss_pred             cEEEEEeCCC-CccEEEEEecCCeEEEEeCCCCCCCceEEe-----cCCCCCEEEEEEccCCC-EEEEEeCCCcEEEEEC
Q psy7062          14 QISTVFDSKH-LVEMVAALGGYQHIRMYDFGSNNPNPVINC-----EGVSKNVVEVGFQEDGK-WMFTGGEDCRARIWDL   86 (148)
Q Consensus        14 ~~~~~~~~~~-~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~-----~~~~~~i~~~~~sp~~~-~l~~~~~~~~i~l~d~   86 (148)
                      ..+++|+|.. .++++++++.|+.+++||++++  +.+..+     .+|...|.+++|+|++. ++++++.|+.+++||+
T Consensus       212 v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~  289 (357)
T 3i2n_A          212 VCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQ--HPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKY  289 (357)
T ss_dssp             EEEEEESCSSSSCCEEEEEESTTEEEEEEEEEE--ETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEE
T ss_pred             eEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCC--CcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeec
Confidence            4677777721 3889999999999999999876  444443     38999999999999998 8999999999999999


Q ss_pred             Ccc------------------------cc---ccceEEEEccCCCEEE-EEecCCceecCeeEEEeecCCCc
Q psy7062          87 SLC------------------------FI---QQVNALRITPDKQLLA-SAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        87 ~~~------------------------~~---~~i~~~~~sp~~~~l~-~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                      +..                        +.   ..+.+++|+|++++|+ +++.|+      .|++||+.+.+
T Consensus       290 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~------~i~iw~~~~~~  355 (357)
T 3i2n_A          290 EYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQ------TVRVLIVTKLN  355 (357)
T ss_dssp             ECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTS------EEEEEEECC--
T ss_pred             CCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCC------cEEEEECCCcc
Confidence            742                        11   6799999999999888 799988      99999998654

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=99.70  E-value=2.8e-16  Score=114.07  Aligned_cols=110  Identities=14%  Similarity=0.190  Sum_probs=88.6

Q ss_pred             cEEEEEeC------CCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCC-EEEEEeCCCcEEEEEC
Q psy7062          14 QISTVFDS------KHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGK-WMFTGGEDCRARIWDL   86 (148)
Q Consensus        14 ~~~~~~~~------~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~~~~~i~l~d~   86 (148)
                      ...++|+|      ..++++|++++.|++|++||+++.  ..+..+..|...+.+++|+|++. .+++++.|+++++||+
T Consensus       139 v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~--~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~  216 (393)
T 4gq1_A          139 VNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE--GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDW  216 (393)
T ss_dssp             EEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETT--EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEET
T ss_pred             eEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCC--ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEEC
Confidence            46778875      124899999999999999999887  67777778999999999999875 7999999999999999


Q ss_pred             Ccc-----c-------------------------c---ccceEEEEc-cCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          87 SLC-----F-------------------------I---QQVNALRIT-PDKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        87 ~~~-----~-------------------------~---~~i~~~~~s-p~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                      +++     +                         .   ..+.++.|+ |+++.+++++.|+      ++++||+.....
T Consensus       217 ~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~------~i~vwd~~~~~~  289 (393)
T 4gq1_A          217 TLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSG------AWLRWNLFANND  289 (393)
T ss_dssp             TCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTS------EEEEEEC-----
T ss_pred             CCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCC------CEEEEECccCCC
Confidence            765     0                         0   456778886 7999999999988      999999876543

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=99.70  E-value=3.3e-16  Score=112.81  Aligned_cols=122  Identities=7%  Similarity=-0.007  Sum_probs=94.9

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCce--EEecCCCCCEEEEEEccCCCEEEEEeCCC----cEEEEECC
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPV--INCEGVSKNVVEVGFQEDGKWMFTGGEDC----RARIWDLS   87 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~--~~~~~~~~~i~~~~~sp~~~~l~~~~~~~----~i~l~d~~   87 (148)
                      ...++|+|+  ++++++++ ++.+.+|+..++  +.+  .....|...+.+++|+|+++.+++++.++    .+++||+.
T Consensus       179 V~~v~fspd--g~~l~s~s-~~~~~~~~~~~~--~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~  253 (365)
T 4h5i_A          179 VKDLHFSTD--GKVVAYIT-GSSLEVISTVTG--SCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIK  253 (365)
T ss_dssp             CCEEEECTT--SSEEEEEC-SSCEEEEETTTC--CEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEE
T ss_pred             eEEEEEccC--CceEEecc-ceeEEEEEeccC--cceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccc
Confidence            467888887  89999966 556667777666  433  34456888899999999999999998876    68889886


Q ss_pred             cc---------cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccCcccCcceeec
Q psy7062          88 LC---------FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTLVKPQVTRA  146 (148)
Q Consensus        88 ~~---------~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~  146 (148)
                      ..         +.   ..|.+++|+|++++|++|+.|+      +|++||+++.+.+......+...++.+
T Consensus       254 ~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~------~V~iwd~~~~~~~~~~~~gH~~~V~~v  318 (365)
T 4h5i_A          254 SGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDN------SIALVKLKDLSMSKIFKQAHSFAITEV  318 (365)
T ss_dssp             TTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTS------CEEEEETTTTEEEEEETTSSSSCEEEE
T ss_pred             cceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCC------EEEEEECCCCcEEEEecCcccCCEEEE
Confidence            54         11   6799999999999999999998      999999998887766544444444443

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=99.70  E-value=1.5e-15  Score=110.77  Aligned_cols=109  Identities=16%  Similarity=0.219  Sum_probs=89.2

Q ss_pred             cEEEEEeCCCCccEEEEE--ecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEe--CCCcEEEEECCcc
Q psy7062          14 QISTVFDSKHLVEMVAAL--GGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGG--EDCRARIWDLSLC   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~--~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~--~~~~i~l~d~~~~   89 (148)
                      ..+++|.+.. ..+++++  +.|++|++||+.++  +.+..+. +...+.++.|+|+++.+++++  .|+.|++||++++
T Consensus       279 V~~~~~~p~~-~~~la~~~gs~D~~I~iwd~~t~--~~~~~~~-~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~  354 (420)
T 4gga_A          279 VKAVAWCPWQ-SNVLATGGGTSDRHIRIWNVCSG--ACLSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM  354 (420)
T ss_dssp             EEEEEECTTC-TTEEEEEECTTTCEEEEEETTTT--EEEEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC
T ss_pred             eeeeeeCCCc-ccEEEEEeecCCCEEEEEeCCcc--ccceeec-cccceeeeeecCCCCeEEEEEecCCCEEEEEECCCC
Confidence            3567777764 5566653  47899999999998  7777776 456788999999999887765  6899999999887


Q ss_pred             -----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062          90 -----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV  132 (148)
Q Consensus        90 -----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~  132 (148)
                           +.   .+|.+++|+|++++|++++.|+      +|++||+....+.
T Consensus       355 ~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~------tvriWdv~~~~~~  399 (420)
T 4gga_A          355 AKVAELKGHTSRVLSLTMSPDGATVASAAADE------TLRLWRCFELDPA  399 (420)
T ss_dssp             CEEEEECCCSSCEEEEEECTTSSCEEEEETTT------EEEEECCSCSSCC
T ss_pred             cEEEEEcCCCCCEEEEEEcCCCCEEEEEecCC------eEEEEECCCCCcc
Confidence                 33   7899999999999999999999      9999998865443

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=99.70  E-value=6.3e-16  Score=122.77  Aligned_cols=106  Identities=12%  Similarity=0.159  Sum_probs=93.2

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---   89 (148)
                      ...+++|+|+  +++||+|+.|++|++|+....  +....+ .|...|.+++|+| ++++++++.|+++++||++++   
T Consensus        19 ~V~~lafspd--g~~lAsgs~Dg~I~lw~~~~~--~~~~~~-~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~   92 (902)
T 2oaj_A           19 KPIAAAFDFT--QNLLAIATVTGEVHIYGQQQV--EVVIKL-EDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVL   92 (902)
T ss_dssp             CEEEEEEETT--TTEEEEEETTSEEEEECSTTC--EEEEEC-SSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEE
T ss_pred             CcEEEEECCC--CCEEEEEeCCCEEEEEeCCCc--EEEEEc-CCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEE
Confidence            3578999998  899999999999999999876  555444 4788999999999 889999999999999999876   


Q ss_pred             --cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 --FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 --~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                        +.  ..+.+++|+|++++|++++.|+      .|++||+....
T Consensus        93 ~~~~~~~~V~~v~~sp~g~~l~sgs~dg------~V~lwd~~~~~  131 (902)
T 2oaj_A           93 TTVFVPGKITSIDTDASLDWMLIGLQNG------SMIVYDIDRDQ  131 (902)
T ss_dssp             EEEECSSCEEEEECCTTCSEEEEEETTS------CEEEEETTTTE
T ss_pred             EEEcCCCCEEEEEECCCCCEEEEEcCCC------cEEEEECCCCc
Confidence              22  7799999999999999999988      99999998654

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.69  E-value=1e-16  Score=118.08  Aligned_cols=106  Identities=9%  Similarity=0.042  Sum_probs=89.6

Q ss_pred             cEEEEEeCCCCccEEE----EEecCCeEEEEeCCCC-----CC-C---ceEEecCCCCCEEEEEEccC-CCEEEEEeCCC
Q psy7062          14 QISTVFDSKHLVEMVA----ALGGYQHIRMYDFGSN-----NP-N---PVINCEGVSKNVVEVGFQED-GKWMFTGGEDC   79 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~----~~~~d~~v~~~d~~~~-----~~-~---~~~~~~~~~~~i~~~~~sp~-~~~l~~~~~~~   79 (148)
                      ..+++|+++  +++|+    +++.|++|++||+++.     .. +   .+..+.+|...|.+++|+|+ +..+++++.|+
T Consensus        95 v~~l~~spd--g~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg  172 (434)
T 2oit_A           95 IHHLALSCD--NLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADG  172 (434)
T ss_dssp             EEEEEECTT--SCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTS
T ss_pred             ccEEEEcCC--CCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCC
Confidence            567888887  78888    7788999999998643     00 1   14556679999999999997 88999999999


Q ss_pred             cEEEEECCcc---cc-----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          80 RARIWDLSLC---FI-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        80 ~i~l~d~~~~---~~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                      ++++||+++.   ..     ..+.+++|+|+|++|++++.|+      +|++||.+
T Consensus       173 ~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg------~v~iwd~~  222 (434)
T 2oit_A          173 SIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNG------TVVQYLPT  222 (434)
T ss_dssp             CEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTS------CEEEECTT
T ss_pred             eEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCC------cEEEEccC
Confidence            9999999886   11     6799999999999999999988      99999988

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=99.69  E-value=1.6e-15  Score=107.96  Aligned_cols=112  Identities=14%  Similarity=0.137  Sum_probs=93.8

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCc---eE-EecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECC--
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNP---VI-NCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLS--   87 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~---~~-~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~--   87 (148)
                      ..+++|+++  +++|++++.|+.+++||++..  ..   .. ....|...|.+++|+|+++++++++.|+.+++||++  
T Consensus        99 v~~~~~~~~--~~~l~~~~~d~~v~i~d~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~  174 (372)
T 1k8k_C           99 ARCVRWAPN--EKKFAVGSGSRVISICYFEQE--NDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIK  174 (372)
T ss_dssp             EEEEEECTT--SSEEEEEETTSSEEEEEEETT--TTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCT
T ss_pred             eeEEEECCC--CCEEEEEeCCCEEEEEEecCC--CcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccc
Confidence            457778877  889999999999999999987  42   23 335688999999999999999999999999999964  


Q ss_pred             ----------------cc-----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          88 ----------------LC-----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        88 ----------------~~-----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                                      ..     +.   ..+.+++|+|++++|++++.|+      .|++||+++.+....+
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~------~i~i~d~~~~~~~~~~  240 (372)
T 1k8k_C          175 EVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDS------TVCLADADKKMAVATL  240 (372)
T ss_dssp             TTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTT------EEEEEEGGGTTEEEEE
T ss_pred             cccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCC------EEEEEECCCCceeEEE
Confidence                            22     22   6799999999999999999988      9999999877655444

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=99.69  E-value=8.7e-16  Score=112.99  Aligned_cols=113  Identities=14%  Similarity=0.147  Sum_probs=95.6

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCC--ceEEecCCCCCEEEEEEccC---CCEEEEEeCCCcEEEEECCc
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPN--PVINCEGVSKNVVEVGFQED---GKWMFTGGEDCRARIWDLSL   88 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~--~~~~~~~~~~~i~~~~~sp~---~~~l~~~~~~~~i~l~d~~~   88 (148)
                      ..+++|+++  +.+|++++.++.+.+|++.+....  ....+.+|...|.+++|+|+   ++++++++.|+.|++||+++
T Consensus       152 v~~~~~sp~--~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~  229 (450)
T 2vdu_B          152 PNAISIAED--DTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQ  229 (450)
T ss_dssp             EEEEEECTT--SSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESC
T ss_pred             ceEEEEcCC--CCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCC
Confidence            457888887  889999999999999999877211  22366789999999999999   99999999999999999987


Q ss_pred             c------cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          89 C------FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        89 ~------~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                      .      +.   ..+.+++|+ ++++|++++.|+      .|++||+.+.+....+
T Consensus       230 ~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~------~v~vwd~~~~~~~~~~  278 (450)
T 2vdu_B          230 CFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDD------KIFAWDWKTGKNLSTF  278 (450)
T ss_dssp             TTCEEEECCCCSSCEEEEEEC-STTEEEEEESSS------EEEEEETTTCCEEEEE
T ss_pred             CceeeeeecCCCCceEEEEEC-CCCEEEEEeCCC------eEEEEECCCCcEeeee
Confidence            6      21   779999999 999999999988      9999999987655433

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=99.69  E-value=6.6e-16  Score=112.64  Aligned_cols=107  Identities=12%  Similarity=0.162  Sum_probs=91.2

Q ss_pred             cCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCC-----------ceEEecCCC------------CCEEEEEEccC
Q psy7062          12 FGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPN-----------PVINCEGVS------------KNVVEVGFQED   68 (148)
Q Consensus        12 ~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~-----------~~~~~~~~~------------~~i~~~~~sp~   68 (148)
                      ....+++|+++  +++|++|+.|+.|++||+.+.  +           ....+.+|.            ..|.+++|+|+
T Consensus        29 ~~V~~v~~s~~--g~~la~g~~dg~v~iw~~~~~--~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~  104 (447)
T 3dw8_B           29 DIISTVEFNHS--GELLATGDKGGRVVIFQQEQE--NKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQ  104 (447)
T ss_dssp             GSEEEEEECSS--SSEEEEEETTSEEEEEEECC-------CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCC
T ss_pred             CcEEEEEECCC--CCEEEEEcCCCeEEEEEecCC--CCCCcccccceeEecccccccccccccccccccCceEEEEEcCC
Confidence            34578889987  899999999999999999976  4           467788898            88999999999


Q ss_pred             C--CEEEEEeCCCcEEEEECCcc--------------------------------------------c-c---ccceEEE
Q psy7062          69 G--KWMFTGGEDCRARIWDLSLC--------------------------------------------F-I---QQVNALR   98 (148)
Q Consensus        69 ~--~~l~~~~~~~~i~l~d~~~~--------------------------------------------~-~---~~i~~~~   98 (148)
                      +  ..+++++.|+.+++||+...                                            + .   ..+.+++
T Consensus       105 ~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~  184 (447)
T 3dw8_B          105 KNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSIS  184 (447)
T ss_dssp             CSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEE
T ss_pred             CCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEE
Confidence            8  79999999999999998651                                            1 1   6789999


Q ss_pred             EccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          99 ITPDKQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        99 ~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                      |+|++++|+++ .|+      .|++||+...
T Consensus       185 ~~~~~~~l~s~-~d~------~i~iwd~~~~  208 (447)
T 3dw8_B          185 INSDYETYLSA-DDL------RINLWHLEIT  208 (447)
T ss_dssp             ECTTSSEEEEE-CSS------EEEEEETTEE
T ss_pred             EcCCCCEEEEe-CCC------eEEEEECCCC
Confidence            99999999998 788      9999999843

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=99.69  E-value=5e-16  Score=112.22  Aligned_cols=111  Identities=18%  Similarity=0.290  Sum_probs=94.8

Q ss_pred             cEEEEEeCCCCccEEEEEecCC---eEEEEeCCCCCCCceEEec-CCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEECCc
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQ---HIRMYDFGSNNPNPVINCE-GVSKNVVEVGFQE-DGKWMFTGGEDCRARIWDLSL   88 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~---~v~~~d~~~~~~~~~~~~~-~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d~~~   88 (148)
                      ..+++|+++. ..++++++.++   .|++||+++.. ..+..+. +|...|.+++|+| +++++++++.|+.+++||+++
T Consensus       217 v~~~~~~~~~-~~~l~~~~~d~~~~~i~~~d~~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~  294 (416)
T 2pm9_A          217 LSVVEWHPKN-STRVATATGSDNDPSILIWDLRNAN-TPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPES  294 (416)
T ss_dssp             EEEEEECSSC-TTEEEEEECCSSSCCCCEEETTSTT-SCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSS
T ss_pred             eEEEEECCCC-CCEEEEEECCCCCceEEEEeCCCCC-CCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCC
Confidence            5678888872 36888989988   99999999852 4566777 8999999999999 999999999999999999988


Q ss_pred             c-----cc---ccceEEEEccCC-CEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062          89 C-----FI---QQVNALRITPDK-QLLASAEELSCCYCGAAVFVYNSCYPAAV  132 (148)
Q Consensus        89 ~-----~~---~~i~~~~~sp~~-~~l~~~~~d~~~~~~~~i~~~d~~~~~~~  132 (148)
                      .     +.   ..+.+++|+|++ ++|++++.|+      .|++||+......
T Consensus       295 ~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~------~i~iw~~~~~~~~  341 (416)
T 2pm9_A          295 AEQLSQFPARGNWCFKTKFAPEAPDLFACASFDN------KIEVQTLQNLTNT  341 (416)
T ss_dssp             CCEEEEEECSSSCCCCEEECTTCTTEEEECCSSS------EEEEEESCCCCCS
T ss_pred             CccceeecCCCCceEEEEECCCCCCEEEEEecCC------cEEEEEccCCCCC
Confidence            7     22   779999999998 8999999988      9999999876543

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=99.69  E-value=2.8e-15  Score=110.17  Aligned_cols=109  Identities=18%  Similarity=0.231  Sum_probs=95.3

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---c
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---F   90 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---~   90 (148)
                      ..+++|+++  ++++++++.|+.|++||++++  +.+..+.+|...|.+++++  +..+++++.|+.+++||+++.   +
T Consensus       313 v~~~~~~~~--~~~l~sg~~dg~i~vwd~~~~--~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~  386 (464)
T 3v7d_B          313 IYSTIYDHE--RKRCISASMDTTIRIWDLENG--ELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKF  386 (464)
T ss_dssp             EEEEEEETT--TTEEEEEETTSCEEEEETTTT--EEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEE
T ss_pred             EEEEEEcCC--CCEEEEEeCCCcEEEEECCCC--cEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceee
Confidence            456778887  889999999999999999998  8899999999999999986  689999999999999999887   2


Q ss_pred             c----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          91 I----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        91 ~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                      .    ..+..++|+|+++++++++ |+      .|++||+.+.+.+...
T Consensus       387 ~~~~~~~~~~~~~~~~~~~l~~~~-dg------~i~iwd~~~g~~~~~~  428 (464)
T 3v7d_B          387 SYHHTNLSAITTFYVSDNILVSGS-EN------QFNIYNLRSGKLVHAN  428 (464)
T ss_dssp             EEECTTCCCEEEEEECSSEEEEEE-TT------EEEEEETTTCCEEESC
T ss_pred             eecCCCCccEEEEEeCCCEEEEec-CC------eEEEEECCCCcEEehh
Confidence            2    6677889999999999988 77      8999999988776653

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=99.69  E-value=8.7e-16  Score=108.31  Aligned_cols=104  Identities=9%  Similarity=0.031  Sum_probs=91.3

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCC---ceEEecCCCCCEEEEEEccCCC-EEEEEeCCCcEEEEEC-Cc
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPN---PVINCEGVSKNVVEVGFQEDGK-WMFTGGEDCRARIWDL-SL   88 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~---~~~~~~~~~~~i~~~~~sp~~~-~l~~~~~~~~i~l~d~-~~   88 (148)
                      ..+++|+++  +++|++++.|+.|++||+.+.  .   .......|...|.+++|+|+++ .+++++.|+.+++||+ ..
T Consensus        14 v~~~~~s~~--~~~l~~~~~d~~v~iw~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~   89 (342)
T 1yfq_A           14 ISDIKIIPS--KSLLLITSWDGSLTVYKFDIQ--AKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGS   89 (342)
T ss_dssp             EEEEEEEGG--GTEEEEEETTSEEEEEEEETT--TTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSS
T ss_pred             EEEEEEcCC--CCEEEEEcCCCeEEEEEeCCC--CccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccC
Confidence            578888887  899999999999999999887  4   2445557999999999999999 9999999999999999 76


Q ss_pred             c----c----c-ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062          89 C----F----I-QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        89 ~----~----~-~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                      .    +    . ..+.+++|+| ++.+++++.|+      .|++||++.
T Consensus        90 ~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~------~i~iwd~~~  131 (342)
T 1yfq_A           90 PSFQALTNNEANLGICRICKYG-DDKLIAASWDG------LIEVIDPRN  131 (342)
T ss_dssp             SSEEECBSCCCCSCEEEEEEET-TTEEEEEETTS------EEEEECHHH
T ss_pred             CceEeccccCCCCceEEEEeCC-CCEEEEEcCCC------eEEEEcccc
Confidence            6    2    2 5789999999 99999999988      999999886

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=99.68  E-value=1.8e-15  Score=122.63  Aligned_cols=109  Identities=21%  Similarity=0.342  Sum_probs=97.4

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEcc--CCCEEEEEeCCCcEEEEECCcc--
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQE--DGKWMFTGGEDCRARIWDLSLC--   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp--~~~~l~~~~~~~~i~l~d~~~~--   89 (148)
                      ..+++|+++  +++|++++.|++|++||+.++  +.+..+.+|...|.+++|+|  ++..+++++.|+.+++||+.++  
T Consensus       660 v~~~~~s~~--~~~l~s~~~d~~v~vwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~  735 (1249)
T 3sfz_A          660 VLCCAFSSD--DSYIATCSADKKVKIWDSATG--KLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKEC  735 (1249)
T ss_dssp             EEEEEECTT--SSEEEEEETTSEEEEEETTTC--CEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSE
T ss_pred             EEEEEEecC--CCEEEEEeCCCeEEEEECCCC--ceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcch
Confidence            467888887  899999999999999999998  88999999999999999999  5568999999999999999887  


Q ss_pred             ---cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062          90 ---FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV  132 (148)
Q Consensus        90 ---~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~  132 (148)
                         +.   ..+.+++|+|+++.+++++.|+      .|++||+.+....
T Consensus       736 ~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg------~v~vwd~~~~~~~  778 (1249)
T 3sfz_A          736 RNTMFGHTNSVNHCRFSPDDELLASCSADG------TLRLWDVRSANER  778 (1249)
T ss_dssp             EEEECCCSSCEEEEEECSSTTEEEEEESSS------EEEEEEGGGTEEE
T ss_pred             hheecCCCCCEEEEEEecCCCEEEEEECCC------eEEEEeCCCCccc
Confidence               22   7899999999999999999988      9999999866543

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=99.68  E-value=7.2e-16  Score=111.38  Aligned_cols=115  Identities=17%  Similarity=0.251  Sum_probs=97.1

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCC--CCCceEEecCCCCCEEEEEEccC-CCEEEEEeCCCcEEEEECCcc-
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSN--NPNPVINCEGVSKNVVEVGFQED-GKWMFTGGEDCRARIWDLSLC-   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~--~~~~~~~~~~~~~~i~~~~~sp~-~~~l~~~~~~~~i~l~d~~~~-   89 (148)
                      ..+++|+++  +.+|++++.|+.|++||+.+.  ..+.+..+.+|...|.+++|+|+ ++++++++.|+.+++||+.+. 
T Consensus        70 v~~~~~s~~--~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~  147 (416)
T 2pm9_A           70 FNDLDWSHN--NKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCT  147 (416)
T ss_dssp             EEEEEECSS--SSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTS
T ss_pred             eEEEEECCC--CCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCc
Confidence            568888887  889999999999999999871  11467888899999999999998 899999999999999999753 


Q ss_pred             ----------c---c---ccceEEEEccC-CCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062          90 ----------F---I---QQVNALRITPD-KQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN  136 (148)
Q Consensus        90 ----------~---~---~~i~~~~~sp~-~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~  136 (148)
                                +   .   ..+.+++|+|+ +..|++++.|+      .|++||+++.+......
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg------~v~iwd~~~~~~~~~~~  205 (416)
T 2pm9_A          148 ESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSN------FASIWDLKAKKEVIHLS  205 (416)
T ss_dssp             SCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSS------CEEEEETTTTEEEEEEC
T ss_pred             cccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCC------CEEEEECCCCCcceEEe
Confidence                      1   1   67999999998 78999999988      89999998776554443

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=99.68  E-value=3.5e-15  Score=109.66  Aligned_cols=107  Identities=15%  Similarity=0.191  Sum_probs=93.2

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ....+++++  ++++++++.|+.|++||++++  +.+..+.+|...|.+++|+|+++.+++++.|+.+++||++++    
T Consensus       271 ~~v~~~~~~--~~~l~~~~~d~~i~vwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~  346 (464)
T 3v7d_B          271 ASVRTVSGH--GNIVVSGSYDNTLIVWDVAQM--KCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMY  346 (464)
T ss_dssp             SCEEEEEEE--TTEEEEEETTSCEEEEETTTT--EEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEE
T ss_pred             ceEEEEcCC--CCEEEEEeCCCeEEEEECCCC--cEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEE
Confidence            344555555  789999999999999999988  888999999999999999999999999999999999999887    


Q ss_pred             -cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062          90 -FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV  132 (148)
Q Consensus        90 -~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~  132 (148)
                       +.   ..+.++.|+  +++|++++.|+      .|++||+.+....
T Consensus       347 ~~~~h~~~v~~~~~~--~~~l~s~s~dg------~v~vwd~~~~~~~  385 (464)
T 3v7d_B          347 TLQGHTALVGLLRLS--DKFLVSAAADG------SIRGWDANDYSRK  385 (464)
T ss_dssp             EECCCSSCEEEEEEC--SSEEEEEETTS------EEEEEETTTCCEE
T ss_pred             EEeCCCCcEEEEEEc--CCEEEEEeCCC------cEEEEECCCCcee
Confidence             32   778888886  68999999988      9999999876543

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=99.68  E-value=9.2e-16  Score=119.65  Aligned_cols=109  Identities=17%  Similarity=0.182  Sum_probs=94.4

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccC--CCEEEEEeCCCcEEEEECCcc--
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQED--GKWMFTGGEDCRARIWDLSLC--   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~--~~~l~~~~~~~~i~l~d~~~~--   89 (148)
                      ..+++|+++  +++|++|+.|++|++||+.....+.+..+.+|...|.+++|+|+  ++.+++++.||.+++||+.++  
T Consensus        12 V~~l~~s~d--g~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~   89 (753)
T 3jro_A           12 IHDAVLDYY--GKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRW   89 (753)
T ss_dssp             EEEECCCSS--SCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEE
T ss_pred             eEEEEECCC--CCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcc
Confidence            456666676  88999999999999999984423667788899999999999988  999999999999999999876  


Q ss_pred             -----cc---ccceEEEEccC--CCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 -----FI---QQVNALRITPD--KQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 -----~~---~~i~~~~~sp~--~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                           +.   ..+.+++|+|+  ++.+++++.|+      .|++||++...
T Consensus        90 ~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg------~I~vwdl~~~~  134 (753)
T 3jro_A           90 SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDG------KVSVVEFKENG  134 (753)
T ss_dssp             EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS------EEEEEECCSSS
T ss_pred             cccccccCCCCCeEEEEECCCCCCCEEEEEeCCC------cEEEEEeecCC
Confidence                 21   78999999998  99999999988      99999998763

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=99.68  E-value=5.3e-15  Score=104.81  Aligned_cols=106  Identities=14%  Similarity=0.258  Sum_probs=92.1

Q ss_pred             cEEEEEeC-CCCccEEEEEecCCeEEEEeCCCCCCCceEEe---cCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc
Q psy7062          14 QISTVFDS-KHLVEMVAALGGYQHIRMYDFGSNNPNPVINC---EGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC   89 (148)
Q Consensus        14 ~~~~~~~~-~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~---~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~   89 (148)
                      ..+++|++ +  +.+|++++.|+.|++||++++  +.+..+   ..|...|.+++|+|+++.+++++.|+.+++||+++.
T Consensus       118 i~~~~~~~~~--~~~l~s~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~  193 (366)
T 3k26_A          118 INELKFHPRD--PNLLLSVSKDHALRLWNIQTD--TLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSK  193 (366)
T ss_dssp             EEEEEECSSC--TTEEEEEETTSCEEEEETTTT--EEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSH
T ss_pred             EEEEEECCCC--CCEEEEEeCCCeEEEEEeecC--eEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCC
Confidence            46777877 5  889999999999999999988  777777   679999999999999999999999999999999876


Q ss_pred             -----c------------------------------c-ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          90 -----F------------------------------I-QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        90 -----~------------------------------~-~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                           +                              . ..+.+++|+  ++++++++.|+      .|++||+.+...
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~------~i~~wd~~~~~~  263 (366)
T 3k26_A          194 RMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCEN------AIVCWKPGKMED  263 (366)
T ss_dssp             HHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSS------EEEEEEESSTTC
T ss_pred             ccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCC------EEEEEeCCCccc
Confidence                 1                              2 568899998  77999999988      999999886543

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=99.68  E-value=1.7e-15  Score=109.85  Aligned_cols=114  Identities=15%  Similarity=0.192  Sum_probs=90.2

Q ss_pred             cEEEEEeCCCCccEEEEEe--cCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEE--EeCCCcEEEEECCcc
Q psy7062          14 QISTVFDSKHLVEMVAALG--GYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFT--GGEDCRARIWDLSLC   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~--~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~--~~~~~~i~l~d~~~~   89 (148)
                      ..+++|+++. ..++++++  .|+.+++||+.++  +.+..+. +...+.+++|+|+++.+++  |+.++.+++||+.+.
T Consensus       262 v~~~~~~p~~-~~ll~~~~gs~d~~i~i~d~~~~--~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~  337 (401)
T 4aez_A          262 VKAVAWCPWQ-SNLLATGGGTMDKQIHFWNAATG--ARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSS  337 (401)
T ss_dssp             CCEEEECTTS-TTEEEEECCTTTCEEEEEETTTC--CEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETT
T ss_pred             EEEEEECCCC-CCEEEEecCCCCCEEEEEECCCC--CEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCc
Confidence            4678888863 56777755  6999999999988  7777776 6788999999999999988  448999999999885


Q ss_pred             -------cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccCc
Q psy7062          90 -------FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNT  137 (148)
Q Consensus        90 -------~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~  137 (148)
                             +.   ..+.+++|+|++++|++++.|+      .|++||+.+.+.......
T Consensus       338 ~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg------~i~iw~~~~~~~~~~~~~  389 (401)
T 4aez_A          338 GLTKQVDIPAHDTRVLYSALSPDGRILSTAASDE------NLKFWRVYDGDHVKRPIP  389 (401)
T ss_dssp             EEEEEEEEECCSSCCCEEEECTTSSEEEEECTTS------EEEEEECCC---------
T ss_pred             cceeEEEecCCCCCEEEEEECCCCCEEEEEeCCC------cEEEEECCCCcccccccc
Confidence                   22   7899999999999999999988      999999998776554433

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=99.68  E-value=6.9e-15  Score=105.63  Aligned_cols=110  Identities=18%  Similarity=0.219  Sum_probs=94.1

Q ss_pred             EEEEEeCCC-CccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCC-EEEEEeCCCcEEEEECCcc---
Q psy7062          15 ISTVFDSKH-LVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGK-WMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        15 ~~~~~~~~~-~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~~~~~i~l~d~~~~---   89 (148)
                      ..+.+.+.. .+.++++++.++.+++||++++  +.+..+..|...|.+++|+|++. .+++++.|+.+++||++..   
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~--~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~  222 (408)
T 4a11_B          145 YSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSG--SCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGC  222 (408)
T ss_dssp             EEEEECSSCSSCCEEEEEESSSSEEEEESSSS--CCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCC
T ss_pred             eeeEeecCCCCCcEEEEEcCCCeEEEEeCCCc--ceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcc
Confidence            456666532 3568999999999999999988  78888989999999999999998 5899999999999999653   


Q ss_pred             ---c---------------c---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062          90 ---F---------------I---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV  132 (148)
Q Consensus        90 ---~---------------~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~  132 (148)
                         +               .   ..+.+++|+|++++|++++.|+      .|++||+.+....
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg------~i~vwd~~~~~~~  280 (408)
T 4a11_B          223 LITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDN------RMRLWNSSNGENT  280 (408)
T ss_dssp             SEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTS------CEEEEETTTCCBC
T ss_pred             cccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCC------eEEEEECCCCccc
Confidence               1               1   6799999999999999999988      8999999876544

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=99.67  E-value=5.7e-15  Score=104.65  Aligned_cols=119  Identities=16%  Similarity=0.158  Sum_probs=98.4

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCC-CCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGS-NNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~-~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--   89 (148)
                      ...+++|+++  +++|++++.|+.|++||+++ .  +.+..+..|...|.+++|+|+++++++++.|+.+++||+++.  
T Consensus       177 ~~~~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~  252 (369)
T 3zwl_B          177 AATVAGWSTK--GKYIIAGHKDGKISKYDVSNNY--EYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQV  252 (369)
T ss_dssp             CEEEEEECGG--GCEEEEEETTSEEEEEETTTTT--EEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred             ceeEEEEcCC--CCEEEEEcCCCEEEEEECCCCc--EeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCce
Confidence            4567777776  88999999999999999998 4  677888889999999999999999999999999999999887  


Q ss_pred             ---cc--ccceEEEEccCCCEEEEEecCCcee--------cCeeEEEeecCCCcceecc
Q psy7062          90 ---FI--QQVNALRITPDKQLLASAEELSCCY--------CGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        90 ---~~--~~i~~~~~sp~~~~l~~~~~d~~~~--------~~~~i~~~d~~~~~~~~~~  135 (148)
                         +.  ..+..++|+|+++++++++.++...        ....+++||..+.+.....
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~  311 (369)
T 3zwl_B          253 LKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRV  311 (369)
T ss_dssp             EEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEE
T ss_pred             eeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhhe
Confidence               22  7899999999999999998766211        1126899998877665444

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=99.67  E-value=3e-15  Score=109.69  Aligned_cols=108  Identities=15%  Similarity=0.214  Sum_probs=89.7

Q ss_pred             EEEEEeCCCCcc-EEEEEecCCeEEEEeCCCCCC--C---ceEEecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEECC
Q psy7062          15 ISTVFDSKHLVE-MVAALGGYQHIRMYDFGSNNP--N---PVINCEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIWDLS   87 (148)
Q Consensus        15 ~~~~~~~~~~~~-~l~~~~~d~~v~~~d~~~~~~--~---~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d~~   87 (148)
                      .+++|++.  +. +|++++.|+.|++||+.....  .   ....+..|...|.+++|+| ++..+++++.++.|++||++
T Consensus       185 ~~l~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~  262 (430)
T 2xyi_A          185 YGLSWNPN--LNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTR  262 (430)
T ss_dssp             CCEEECTT--STTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETT
T ss_pred             EEEEeCCC--CCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECC
Confidence            56788887  45 889989999999999987411  1   1456678999999999999 67899999999999999998


Q ss_pred             cc--------cc---ccceEEEEccCCC-EEEEEecCCceecCeeEEEeecCCCc
Q psy7062          88 LC--------FI---QQVNALRITPDKQ-LLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        88 ~~--------~~---~~i~~~~~sp~~~-~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                      ..        +.   ..+.+++|+|+++ .+++++.|+      .|++||++...
T Consensus       263 ~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg------~v~vwd~~~~~  311 (430)
T 2xyi_A          263 NNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADK------TVALWDLRNLK  311 (430)
T ss_dssp             CSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTS------EEEEEETTCTT
T ss_pred             CCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCC------eEEEEeCCCCC
Confidence            64        22   7799999999887 688999988      99999999754

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=99.67  E-value=4.5e-15  Score=105.16  Aligned_cols=70  Identities=16%  Similarity=0.248  Sum_probs=60.5

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEE--ccCCCEEEEEeCCCcEEEEECCc
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGF--QEDGKWMFTGGEDCRARIWDLSL   88 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~--sp~~~~l~~~~~~~~i~l~d~~~   88 (148)
                      ..+++|+++  +++|++++.|+.|++||++++  +.+. ...|...|.+++|  +|+++.+++++.|+.+++||+++
T Consensus        89 v~~~~~~~~--~~~l~s~~~dg~v~iwd~~~~--~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~  160 (368)
T 3mmy_A           89 VLDVCWSDD--GSKVFTASCDKTAKMWDLSSN--QAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRS  160 (368)
T ss_dssp             EEEEEECTT--SSEEEEEETTSEEEEEETTTT--EEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSC
T ss_pred             EEEEEECcC--CCEEEEEcCCCcEEEEEcCCC--Ccee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCC
Confidence            467778886  889999999999999999987  5554 4569999999999  88999999999999999999853

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=99.65  E-value=5.8e-15  Score=107.74  Aligned_cols=103  Identities=13%  Similarity=0.212  Sum_probs=83.4

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEe--cCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINC--EGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~--~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---   89 (148)
                      +.++|++   +++|++ +.|++|++||..++  +.+..+  .+|...|++++|+|+|+++++|+.|+++++||+.++   
T Consensus       109 ~~l~wS~---~n~lAv-gld~tV~lWd~~tg--~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~  182 (420)
T 4gga_A          109 NLVDWSS---GNVLAV-ALDNSVYLWSASSG--DILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRL  182 (420)
T ss_dssp             BCEEECT---TSEEEE-EETTEEEEEETTTC--CEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred             eeEEECC---CCEEEE-EeCCEEEEEECCCC--CEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEE
Confidence            4577764   468888 56999999999998  665554  467788999999999999999999999999999987   


Q ss_pred             --cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          90 --FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        90 --~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                        +.   ..+.++.  +++..|++++.|+      .+++||......
T Consensus       183 ~~~~~h~~~v~~~s--~~~~~l~sgs~d~------~i~~~d~~~~~~  221 (420)
T 4gga_A          183 RNMTSHSARVGSLS--WNSYILSSGSRSG------HIHHHDVRVAEH  221 (420)
T ss_dssp             EEECCCSSCEEEEE--EETTEEEEEETTS------EEEEEETTSSSC
T ss_pred             EEEeCCCCceEEEe--eCCCEEEEEeCCC------ceeEeeecccce
Confidence              22   5555554  4788999999988      999999876543

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=99.65  E-value=9.2e-15  Score=110.22  Aligned_cols=111  Identities=17%  Similarity=0.127  Sum_probs=97.2

Q ss_pred             cEEEEEeCCCCcc-EEEEEecCCeEEEEeCCCCCCCceEEecCCCC---CEEEEEEccC-CCEEEEEeCCCcEEEEECCc
Q psy7062          14 QISTVFDSKHLVE-MVAALGGYQHIRMYDFGSNNPNPVINCEGVSK---NVVEVGFQED-GKWMFTGGEDCRARIWDLSL   88 (148)
Q Consensus        14 ~~~~~~~~~~~~~-~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~---~i~~~~~sp~-~~~l~~~~~~~~i~l~d~~~   88 (148)
                      ..+++|+++  +. ++++++.|+.+++||+++.  +.+..+.+|..   .|.+++|+|+ ++++++++.|+.+++||+++
T Consensus       163 v~~~~~~~~--~~~~l~~~~~d~~v~vwd~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~  238 (615)
T 1pgu_A          163 INACHLKQS--RPMRSMTVGDDGSVVFYQGPPF--KFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKS  238 (615)
T ss_dssp             EEEEEECSS--SSCEEEEEETTTEEEEEETTTB--EEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTT
T ss_pred             EEEEEECCC--CCcEEEEEeCCCcEEEEeCCCc--ceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCC
Confidence            457777777  55 7899999999999999988  88889999998   9999999999 99999999999999999987


Q ss_pred             c-----c-----c--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          89 C-----F-----I--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        89 ~-----~-----~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                      +     +     .  ..+.+++|+ ++++|++++.|+      .|++||+++.+....+
T Consensus       239 ~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~------~i~~wd~~~~~~~~~~  290 (615)
T 1pgu_A          239 GEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADA------TIRVWDVTTSKCVQKW  290 (615)
T ss_dssp             CCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTS------EEEEEETTTTEEEEEE
T ss_pred             CCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCC------cEEEEECCCCcEEEEE
Confidence            6     4     4  678999999 999999999988      9999999876655443

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=99.65  E-value=7.4e-15  Score=107.58  Aligned_cols=107  Identities=15%  Similarity=0.258  Sum_probs=91.0

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCC-EEEEEeCCCcEEEEECCc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGK-WMFTGGEDCRARIWDLSL----   88 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~~~~~i~l~d~~~----   88 (148)
                      ..+++|++.. ..++++|+.|+.|++||++.. ...+..+..|...|.+++|+|+++ .+++++.|+.|++||+..    
T Consensus       280 v~~i~~~p~~-~~~l~tg~~dg~v~vwd~~~~-~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~  357 (430)
T 2xyi_A          280 VNCLSFNPYS-EFILATGSADKTVALWDLRNL-KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEE  357 (430)
T ss_dssp             EEEEEECSSC-TTEEEEEETTSEEEEEETTCT-TSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCC
T ss_pred             eEEEEeCCCC-CCEEEEEeCCCeEEEEeCCCC-CCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccc
Confidence            4678888862 347889999999999999984 156888888999999999999985 789999999999999987    


Q ss_pred             -----------c----cc---ccceEEEEccCCC-EEEEEecCCceecCeeEEEeecCC
Q psy7062          89 -----------C----FI---QQVNALRITPDKQ-LLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        89 -----------~----~~---~~i~~~~~sp~~~-~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                                 .    +.   ..+.+++|+|+++ .+++++.|+      .|++|++..
T Consensus       358 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg------~i~iw~~~~  410 (430)
T 2xyi_A          358 QSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDN------IMQVWQMAE  410 (430)
T ss_dssp             CCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTS------EEEEEEECH
T ss_pred             cCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCC------CEEEeEccc
Confidence                       2    11   6799999999998 899999988      999999863

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=99.65  E-value=4.3e-15  Score=105.11  Aligned_cols=110  Identities=11%  Similarity=0.206  Sum_probs=91.2

Q ss_pred             cEEEEEeCCC-CccEEEEEecCCeEEEEeCCCCCCC-ceEEecCCCCCEEEEE------EccCCCEEEEEeCCCcEEEEE
Q psy7062          14 QISTVFDSKH-LVEMVAALGGYQHIRMYDFGSNNPN-PVINCEGVSKNVVEVG------FQEDGKWMFTGGEDCRARIWD   85 (148)
Q Consensus        14 ~~~~~~~~~~-~~~~l~~~~~d~~v~~~d~~~~~~~-~~~~~~~~~~~i~~~~------~sp~~~~l~~~~~~~~i~l~d   85 (148)
                      ..+++|+++. .+.+|++++.|+.|++||++++  + .+..+.+|...|.+++      |+|+++.+++++.|+.+++||
T Consensus        68 v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd  145 (357)
T 3i2n_A           68 IKCGTFGATSLQQRYLATGDFGGNLHIWNLEAP--EMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWD  145 (357)
T ss_dssp             EEEEECTTCCTTTCCEEEEETTSCEEEECTTSC--SSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEEC
T ss_pred             EEEEEEcCCCCCCceEEEecCCCeEEEEeCCCC--CccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEe
Confidence            4566777652 2688999999999999999987  5 7888889999999995      468999999999999999999


Q ss_pred             CCcc------cc-------ccceEEE----EccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          86 LSLC------FI-------QQVNALR----ITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        86 ~~~~------~~-------~~i~~~~----~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                      ++..      +.       ..+.+++    |+|+++++++++.|+      .|++||+++...
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~------~i~i~d~~~~~~  202 (357)
T 3i2n_A          146 PRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNG------DIKLFDLRNMAL  202 (357)
T ss_dssp             TTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTS------EEEEEETTTTEE
T ss_pred             CCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCC------eEEEEECccCce
Confidence            9875      21       3788888    788999999999988      999999987664

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=99.64  E-value=1.1e-14  Score=104.61  Aligned_cols=113  Identities=14%  Similarity=0.134  Sum_probs=92.9

Q ss_pred             cEEEEEeC-CCCccEEEEEecCCeEEEEeCCCCCCCceEEe-------------cCCCCCEEEEEEcc-CCCEEEEEeCC
Q psy7062          14 QISTVFDS-KHLVEMVAALGGYQHIRMYDFGSNNPNPVINC-------------EGVSKNVVEVGFQE-DGKWMFTGGED   78 (148)
Q Consensus        14 ~~~~~~~~-~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~-------------~~~~~~i~~~~~sp-~~~~l~~~~~~   78 (148)
                      ..+++|+| +  +++|++++.|+.|++||+++.  .....+             .+|...|.+++|+| ++..+++++.|
T Consensus        46 v~~~~~s~~~--~~~l~~~~~dg~i~iw~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d  121 (408)
T 4a11_B           46 INTLDIEPVE--GRYMLSGGSDGVIVLYDLENS--SRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFD  121 (408)
T ss_dssp             EEEEEECTTT--CCEEEEEETTSCEEEEECCCC--SSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETT
T ss_pred             EEEEEEecCC--CCEEEEEcCCCeEEEEECCCC--cccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCC
Confidence            46788888 6  899999999999999999987  433332             25899999999999 77899999999


Q ss_pred             CcEEEEECCcc-----cc--ccceEEEEcc---CCCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062          79 CRARIWDLSLC-----FI--QQVNALRITP---DKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN  136 (148)
Q Consensus        79 ~~i~l~d~~~~-----~~--~~i~~~~~sp---~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~  136 (148)
                      +.+++||+.+.     +.  ..+.++.|+|   ++..+++++.++      .|++||+++......+.
T Consensus       122 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~v~~~d~~~~~~~~~~~  183 (408)
T 4a11_B          122 KTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGP------KVQLCDLKSGSCSHILQ  183 (408)
T ss_dssp             SEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSS------SEEEEESSSSCCCEEEC
T ss_pred             CeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCC------eEEEEeCCCcceeeeec
Confidence            99999999987     22  7788999988   445999999988      89999998776554443

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=99.64  E-value=4.6e-15  Score=115.71  Aligned_cols=111  Identities=10%  Similarity=0.089  Sum_probs=96.2

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccC--CCEEEEEeCCCcEEEEECCcc--
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQED--GKWMFTGGEDCRARIWDLSLC--   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~--~~~l~~~~~~~~i~l~d~~~~--   89 (148)
                      ..+++|+++..+++|++++.|++|++||+.++....+..+..|...|.+++|+|+  +..+++++.|+.+++||++..  
T Consensus        56 V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~  135 (753)
T 3jro_A           56 VWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT  135 (753)
T ss_dssp             EEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSC
T ss_pred             eEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCC
Confidence            4577787776689999999999999999998722267778889999999999999  999999999999999999876  


Q ss_pred             -----cc---ccceEEEEcc-------------CCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 -----FI---QQVNALRITP-------------DKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 -----~~---~~i~~~~~sp-------------~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                           +.   ..+.+++|+|             ++..+++++.|+      .|++||++...
T Consensus       136 ~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg------~I~iwd~~~~~  191 (753)
T 3jro_A          136 TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN------LVKIWKYNSDA  191 (753)
T ss_dssp             CCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTS------CEEEEEEETTT
T ss_pred             cceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCC------eEEEEeccCCc
Confidence                 11   7899999999             589999999988      99999998764

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.64  E-value=7.6e-15  Score=110.70  Aligned_cols=105  Identities=9%  Similarity=0.025  Sum_probs=87.0

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCC-C----ceEEe----cCCCCCEEEEEEccCCCEEEEEeCCCcEEEE
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNP-N----PVINC----EGVSKNVVEVGFQEDGKWMFTGGEDCRARIW   84 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~-~----~~~~~----~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~   84 (148)
                      ..+++|+|+  |++|++|+.|++|++||+.++.. +    .+.++    .+|...|.+++|+|+|  +++++.|+.+++|
T Consensus       132 v~svafSPD--G~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlW  207 (588)
T 2j04_A          132 YHCFEWNPI--ESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSM  207 (588)
T ss_dssp             EEEEEECSS--SSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEE
T ss_pred             EEEEEEcCC--CCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEE
Confidence            568999998  99999999999999999998721 0    24665    6678899999999999  8888999999999


Q ss_pred             ECCcc--------cc----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          85 DLSLC--------FI----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        85 d~~~~--------~~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                      |+...        +.    ..|.+++|+  ++.|++++ ++      +|++||+.....
T Consensus       208 d~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~------tIkLWd~~~~~~  257 (588)
T 2j04_A          208 TVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PG------YVHKIDLKNYSI  257 (588)
T ss_dssp             CCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SS------EEEEEETTTTEE
T ss_pred             ECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CC------eEEEEECCCCeE
Confidence            99765        21    569999999  68888887 46      899999886554

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=99.63  E-value=4e-14  Score=99.74  Aligned_cols=115  Identities=12%  Similarity=0.117  Sum_probs=93.1

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCC-CCCCceEEecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEECCcc--
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGS-NNPNPVINCEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIWDLSLC--   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~-~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d~~~~--   89 (148)
                      ..+++|+++  +  +++++.++.+++||+++ ...........|...+.+++|+| +++.+++++.++.+++||+...  
T Consensus       153 v~~~~~~~~--~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~  228 (342)
T 1yfq_A          153 IFTMDTNSS--R--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGD  228 (342)
T ss_dssp             EEEEEECSS--E--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCC
T ss_pred             eEEEEecCC--c--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCc
Confidence            456677665  3  78889999999999998 52233445556888999999999 9999999999999999998542  


Q ss_pred             ---------cc---c---------cceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccCcc
Q psy7062          90 ---------FI---Q---------QVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTL  138 (148)
Q Consensus        90 ---------~~---~---------~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~~  138 (148)
                               +.   .         .+.+++|+|++++|++++.|+      .|++||+.+.+....+...
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg------~i~vwd~~~~~~~~~~~~~  292 (342)
T 1yfq_A          229 DYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDG------IISCWNLQTRKKIKNFAKF  292 (342)
T ss_dssp             STTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTS------CEEEEETTTTEEEEECCCC
T ss_pred             ccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCc------eEEEEcCccHhHhhhhhcc
Confidence                     22   2         899999999999999999988      9999999987766655544

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=99.63  E-value=1.1e-14  Score=106.27  Aligned_cols=112  Identities=10%  Similarity=0.080  Sum_probs=89.6

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCC---CCCCCceEEecC------------CCCCEEEEE--EccCCCEEEEEe
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFG---SNNPNPVINCEG------------VSKNVVEVG--FQEDGKWMFTGG   76 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~---~~~~~~~~~~~~------------~~~~i~~~~--~sp~~~~l~~~~   76 (148)
                      ..+++|+++  +++|++++.|++|++||++   ++  +.+.....            +...+.++.  +++++..+++++
T Consensus       114 v~~~~~~~~--~~~l~s~s~dg~i~vwd~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  189 (437)
T 3gre_A          114 VTQITMIPN--FDAFAVSSKDGQIIVLKVNHYQQE--SEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALT  189 (437)
T ss_dssp             EEEEEECTT--SSEEEEEETTSEEEEEEEEEEEET--TEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEE
T ss_pred             EEEEEEeCC--CCEEEEEeCCCEEEEEEeccccCC--ceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEe
Confidence            567888876  8899999999999999995   43  33333221            445566666  557899999999


Q ss_pred             CCCcEEEEECCcc-----cc-----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          77 EDCRARIWDLSLC-----FI-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        77 ~~~~i~l~d~~~~-----~~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                      .|+.+++||+++.     +.     ..+.+++|+|++++|++++.|+      .|++||+++......+
T Consensus       190 ~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg------~i~iwd~~~~~~~~~~  252 (437)
T 3gre_A          190 NLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRG------IIDIWDIRFNVLIRSW  252 (437)
T ss_dssp             TTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTS------CEEEEETTTTEEEEEE
T ss_pred             CCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCC------eEEEEEcCCccEEEEE
Confidence            9999999999887     22     6799999999999999999988      9999999987665544

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=99.63  E-value=1.8e-14  Score=100.15  Aligned_cols=99  Identities=14%  Similarity=0.084  Sum_probs=86.9

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..+++| ++  +++|++++.|+.|++||+++.  +....+..|...|.+++|+|+++.+++++.|+.+++|++...    
T Consensus        21 v~~~~~-~~--~~~l~s~~~dg~v~vw~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~   95 (313)
T 3odt_A           21 VRDVVA-VD--DSKVASVSRDGTVRLWSKDDQ--WLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGED   95 (313)
T ss_dssp             EEEEEE-EE--TTEEEEEETTSEEEEEEESSS--EEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSC
T ss_pred             cEEEEe-cC--CCEEEEEEcCCcEEEEECCCC--EEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCC
Confidence            456666 55  788999999999999999887  777888889999999999999999999999999999999765    


Q ss_pred             ----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEee
Q psy7062          90 ----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYN  125 (148)
Q Consensus        90 ----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d  125 (148)
                          +.   ..+.++.|  +++.+++++.|+      .|++||
T Consensus        96 ~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~------~i~~~d  130 (313)
T 3odt_A           96 PLYTLIGHQGNVCSLSF--QDGVVISGSWDK------TAKVWK  130 (313)
T ss_dssp             C-CEECCCSSCEEEEEE--ETTEEEEEETTS------EEEEEE
T ss_pred             cccchhhcccCEEEEEe--cCCEEEEEeCCC------CEEEEc
Confidence                22   77888888  678999999988      999999

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=99.62  E-value=3.1e-14  Score=99.31  Aligned_cols=106  Identities=15%  Similarity=0.214  Sum_probs=84.1

Q ss_pred             EEEEEeCCCCccEE--EEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEe--CCCcEEEEECCcc-
Q psy7062          15 ISTVFDSKHLVEMV--AALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGG--EDCRARIWDLSLC-   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l--~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~--~~~~i~l~d~~~~-   89 (148)
                      ...++.+.. ..++  ++++.++++++||....  ...... .+...+..+.++|++..+++++  .|+.|++||++++ 
T Consensus       200 ~~~~~~~~~-~~~~~~~~~~~~~~i~lwd~~~~--~~~~~~-~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~  275 (318)
T 4ggc_A          200 KAVAWCPWQ-SNVLATGGGTSDRHIRIWNVCSG--ACLSAV-DAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA  275 (318)
T ss_dssp             EEEEECTTS-TTEEEEEECTTTCEEEEEETTTC--CEEEEE-ECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC
T ss_pred             EEEEecCCC-CcEEEEEecCCCCEEEEEecccc--cccccc-cceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCc
Confidence            455555543 3333  45567789999999887  554444 4778899999999999877654  7899999999887 


Q ss_pred             ----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 ----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 ----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                          +.   ..|.+++|+|++++|++++.|+      +|++||+....
T Consensus       276 ~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~------~v~iWd~~~~d  317 (318)
T 4ggc_A          276 KVAELKGHTSRVLSLTMSPDGATVASAAADE------TLRLWRCFELD  317 (318)
T ss_dssp             EEEEECCCSSCEEEEEECTTSSCEEEEETTT------EEEEECCSCCC
T ss_pred             EEEEEcCCCCCEEEEEEcCCCCEEEEEecCC------eEEEEECCCCC
Confidence                33   7899999999999999999999      99999997553

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=99.60  E-value=6.4e-14  Score=102.54  Aligned_cols=104  Identities=16%  Similarity=0.291  Sum_probs=89.7

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----   89 (148)
                      ...+++.+  ++++++|+.|++|++||+.++  +.+..+.+|...|.++++  +++.+++++.|+.+++||+.++     
T Consensus       135 ~v~~~~~d--~~~l~~g~~dg~i~iwd~~~~--~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~  208 (435)
T 1p22_A          135 GVYCLQYD--DQKIVSGLRDNTIKIWDKNTL--ECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNT  208 (435)
T ss_dssp             CEEEEECC--SSEEEEEESSSCEEEEESSSC--CEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEE
T ss_pred             cEEEEEEC--CCEEEEEeCCCeEEEEeCCCC--eEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEE
Confidence            34555565  889999999999999999988  888999999999999988  8899999999999999999887     


Q ss_pred             cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062          90 FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV  132 (148)
Q Consensus        90 ~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~  132 (148)
                      +.   ..+.+++|+  +..+++++.|+      .|++||+.+....
T Consensus       209 ~~~h~~~v~~l~~~--~~~l~s~s~dg------~i~vwd~~~~~~~  246 (435)
T 1p22_A          209 LIHHCEAVLHLRFN--NGMMVTCSKDR------SIAVWDMASPTDI  246 (435)
T ss_dssp             ECCCCSCEEEEECC--TTEEEEEETTS------CEEEEECSSSSCC
T ss_pred             EcCCCCcEEEEEEc--CCEEEEeeCCC------cEEEEeCCCCCCc
Confidence            22   778889886  45899999988      9999999876544

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=99.58  E-value=1.3e-13  Score=100.98  Aligned_cols=108  Identities=17%  Similarity=0.249  Sum_probs=89.8

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----   89 (148)
                      ...+...+  +++|++|+.|++|++||++++  +.+..+.+|...|.+++|+  +..+++++.|+.+++||+++.     
T Consensus       175 ~v~~l~~~--~~~l~sg~~dg~i~vwd~~~~--~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~  248 (435)
T 1p22_A          175 SVLCLQYD--ERVIITGSSDSTVRVWDVNTG--EMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITL  248 (435)
T ss_dssp             CEEEEECC--SSEEEEEETTSCEEEEESSSC--CEEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEE
T ss_pred             cEEEEEEC--CCEEEEEcCCCeEEEEECCCC--cEEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCcee
Confidence            33444443  789999999999999999998  8889999999999999996  459999999999999999876     


Q ss_pred             ---cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062          90 ---FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN  136 (148)
Q Consensus        90 ---~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~  136 (148)
                         +.   ..+.++.|  +++.+++++.|+      .|++||+++.+......
T Consensus       249 ~~~~~~~~~~v~~~~~--~~~~l~s~~~dg------~i~vwd~~~~~~~~~~~  293 (435)
T 1p22_A          249 RRVLVGHRAAVNVVDF--DDKYIVSASGDR------TIKVWNTSTCEFVRTLN  293 (435)
T ss_dssp             EEEECCCSSCEEEEEE--ETTEEEEEETTS------EEEEEETTTCCEEEEEE
T ss_pred             eeEecCCCCcEEEEEe--CCCEEEEEeCCC------eEEEEECCcCcEEEEEc
Confidence               11   67888888  888999999988      99999998876655443

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=99.58  E-value=9.2e-14  Score=101.82  Aligned_cols=106  Identities=8%  Similarity=0.145  Sum_probs=89.6

Q ss_pred             EEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----c
Q psy7062          16 STVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----F   90 (148)
Q Consensus        16 ~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~   90 (148)
                      ..+++++  +++|++|+.|++|++||+.++  +.+..+.+|...|.+++++  +..+++++.|+++++||+.++     +
T Consensus       122 ~~~~~~~--g~~l~sg~~dg~i~vwd~~~~--~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~  195 (445)
T 2ovr_B          122 ITCLQFC--GNRIVSGSDDNTLKVWSAVTG--KCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTL  195 (445)
T ss_dssp             EEEEEEE--TTEEEEEETTSCEEEEETTTC--CEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred             EEEEEEc--CCEEEEEECCCcEEEEECCCC--cEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEE
Confidence            3455555  789999999999999999998  8889999999999999997  679999999999999999887     2


Q ss_pred             c---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          91 I---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        91 ~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                      .   ..+.++.|  +++.+++++.|+      .|++||+.+.+.....
T Consensus       196 ~~h~~~v~~~~~--~~~~l~s~s~dg------~i~~wd~~~~~~~~~~  235 (445)
T 2ovr_B          196 YGHTSTVRCMHL--HEKRVVSGSRDA------TLRVWDIETGQCLHVL  235 (445)
T ss_dssp             CCCSSCEEEEEE--ETTEEEEEETTS------EEEEEESSSCCEEEEE
T ss_pred             CCCCCcEEEEEe--cCCEEEEEeCCC------EEEEEECCCCcEEEEE
Confidence            2   67888888  467799999988      9999999876655443

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.55  E-value=1.6e-13  Score=101.02  Aligned_cols=113  Identities=12%  Similarity=-0.014  Sum_probs=90.4

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..+++|+|.. +.+|++++.|++|++||++++  ..+....+|...+.+++|+|+|+++++++.|+.+++||.+..    
T Consensus       152 V~~v~~~p~~-~~~las~s~Dg~v~iwD~~~~--~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~~~~~~~  228 (434)
T 2oit_A          152 VIDMKWNPTV-PSMVAVCLADGSIAVLQVTET--VKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKV  228 (434)
T ss_dssp             EEEEEECSSC-TTEEEEEETTSCEEEEEESSS--EEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTTCCEEEE
T ss_pred             eEEEEECCCC-CCEEEEEECCCeEEEEEcCCC--cceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccCCccccc
Confidence            5678888863 688999999999999999987  555566678899999999999999999999999999999822    


Q ss_pred             cc----------ccceEEEEccCCCEEEEE-ecCCceecCeeEEEeecCCC
Q psy7062          90 FI----------QQVNALRITPDKQLLASA-EELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        90 ~~----------~~i~~~~~sp~~~~l~~~-~~d~~~~~~~~i~~~d~~~~  129 (148)
                      +.          ..+.++.|++++.++++. +.+|.......+++||++..
T Consensus       229 ~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~  279 (434)
T 2oit_A          229 IPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK  279 (434)
T ss_dssp             ECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred             ccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence            11          178899999988877554 34444444456999998854

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.54  E-value=4.8e-13  Score=96.09  Aligned_cols=111  Identities=19%  Similarity=0.202  Sum_probs=88.2

Q ss_pred             cEEEEEeCCCCccEE-EEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEE-EEeCCCcEEEEECCcc--
Q psy7062          14 QISTVFDSKHLVEMV-AALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMF-TGGEDCRARIWDLSLC--   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l-~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~-~~~~~~~i~l~d~~~~--   89 (148)
                      ..+++|+++  ++.+ ++++.+++|++||+.++  +.+..+..+. .+.+++|+|+++.++ +++.++.+++||+.++  
T Consensus        34 ~~~~~~s~d--g~~l~~~~~~d~~i~v~d~~~~--~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~  108 (391)
T 1l0q_A           34 PMGAVISPD--GTKVYVANAHSNDVSIIDTATN--NVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTV  108 (391)
T ss_dssp             EEEEEECTT--SSEEEEEEGGGTEEEEEETTTT--EEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred             cceEEECCC--CCEEEEECCCCCeEEEEECCCC--eEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeE
Confidence            567888887  6655 67668999999999988  7777776444 899999999999775 4556799999999987  


Q ss_pred             ---cc--ccceEEEEccCCCEE-EEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          90 ---FI--QQVNALRITPDKQLL-ASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        90 ---~~--~~i~~~~~sp~~~~l-~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                         +.  ..+.+++|+|+++.+ ++++.++      .|++||+.+.+....+
T Consensus       109 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~------~v~~~d~~~~~~~~~~  154 (391)
T 1l0q_A          109 AGTVKTGKSPLGLALSPDGKKLYVTNNGDK------TVSVINTVTKAVINTV  154 (391)
T ss_dssp             EEEEECSSSEEEEEECTTSSEEEEEETTTT------EEEEEETTTTEEEEEE
T ss_pred             EEEEeCCCCcceEEECCCCCEEEEEeCCCC------EEEEEECCCCcEEEEE
Confidence               22  678999999999977 5666666      8999999876654433

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=99.54  E-value=3.7e-13  Score=98.59  Aligned_cols=99  Identities=17%  Similarity=0.234  Sum_probs=79.9

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc---ccceE
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI---QQVNA   96 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~---~~i~~   96 (148)
                      ++.+++++.|+++++||++++  +.+..+.+|...+.++++  ++..+++++.|+.+++||+++.     +.   ..+.+
T Consensus       209 ~~~l~s~s~dg~i~~wd~~~~--~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~  284 (445)
T 2ovr_B          209 EKRVVSGSRDATLRVWDIETG--QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYS  284 (445)
T ss_dssp             TTEEEEEETTSEEEEEESSSC--CEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEE
T ss_pred             CCEEEEEeCCCEEEEEECCCC--cEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEE
Confidence            566888888899999998887  777888888888888887  7788888888999999998776     22   66777


Q ss_pred             EEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          97 LRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        97 ~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                      +.|  ++..+++++.|+      .|++||+++.+.....
T Consensus       285 ~~~--~~~~l~~~~~d~------~i~i~d~~~~~~~~~~  315 (445)
T 2ovr_B          285 LQF--DGIHVVSGSLDT------SIRVWDVETGNCIHTL  315 (445)
T ss_dssp             EEE--CSSEEEEEETTS------CEEEEETTTCCEEEEE
T ss_pred             EEE--CCCEEEEEeCCC------eEEEEECCCCCEEEEE
Confidence            777  788888888887      8899998877655444

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.53  E-value=5.4e-13  Score=97.03  Aligned_cols=114  Identities=9%  Similarity=-0.026  Sum_probs=90.9

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEE-EEeCCCcEEEEECCcc----
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMF-TGGEDCRARIWDLSLC----   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~-~~~~~~~i~l~d~~~~----   89 (148)
                      .+++|+++  +.++++++.|+.+++||++++  +.+..+..|...+.+++|+|+++.++ +++.++.+++||++++    
T Consensus       173 ~~~~~~~~--~~~~~s~~~d~~v~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~  248 (433)
T 3bws_A          173 ETISIPEH--NELWVSQMQANAVHVFDLKTL--AYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIR  248 (433)
T ss_dssp             EEEEEGGG--TEEEEEEGGGTEEEEEETTTC--CEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred             eEEEEcCC--CEEEEEECCCCEEEEEECCCc--eEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEE
Confidence            45677665  889999899999999999988  78888888899999999999999875 4557899999999877    


Q ss_pred             -cc--ccceEEEEccCCCEEEEEecCCc-ee-cCeeEEEeecCCCcce
Q psy7062          90 -FI--QQVNALRITPDKQLLASAEELSC-CY-CGAAVFVYNSCYPAAV  132 (148)
Q Consensus        90 -~~--~~i~~~~~sp~~~~l~~~~~d~~-~~-~~~~i~~~d~~~~~~~  132 (148)
                       +.  ..+.+++|+|+++.+++++.+.. +. ..+.|++||+.+.+..
T Consensus       249 ~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~  296 (433)
T 3bws_A          249 KTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLI  296 (433)
T ss_dssp             ECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEE
T ss_pred             EecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEE
Confidence             22  66899999999999888874110 00 1338999999876543

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.52  E-value=9e-13  Score=94.66  Aligned_cols=111  Identities=12%  Similarity=0.067  Sum_probs=88.2

Q ss_pred             cEEEEEeCCCCccEE-EEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEe---CCCcEEEEECCcc
Q psy7062          14 QISTVFDSKHLVEMV-AALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGG---EDCRARIWDLSLC   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l-~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~---~~~~i~l~d~~~~   89 (148)
                      ...++|+++  ++.+ ++++.++.|++||++++  +.+..+. +...+.+++|+|+++.+++++   .++.+++||+.++
T Consensus       160 ~~~~~~~~d--g~~l~~~~~~~~~v~~~d~~~~--~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~  234 (391)
T 1l0q_A          160 PKGIAVTPD--GTKVYVANFDSMSISVIDTVTN--SVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTN  234 (391)
T ss_dssp             EEEEEECTT--SSEEEEEETTTTEEEEEETTTT--EEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTT
T ss_pred             cceEEECCC--CCEEEEEeCCCCEEEEEECCCC--eEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCC
Confidence            467788887  5555 67678899999999987  6666665 567889999999999988887   6899999999877


Q ss_pred             -----cc--ccceEEEEccCCCEE-EEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          90 -----FI--QQVNALRITPDKQLL-ASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        90 -----~~--~~i~~~~~sp~~~~l-~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                           +.  ..+.+++|+|+++.+ ++++.|+      .|++||+.+.+....+
T Consensus       235 ~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d~------~v~v~d~~~~~~~~~~  282 (391)
T 1l0q_A          235 KITARIPVGPDPAGIAVTPDGKKVYVALSFXN------TVSVIDTATNTITATM  282 (391)
T ss_dssp             EEEEEEECCSSEEEEEECTTSSEEEEEETTTT------EEEEEETTTTEEEEEE
T ss_pred             eEEEEEecCCCccEEEEccCCCEEEEEcCCCC------EEEEEECCCCcEEEEE
Confidence                 22  567889999999977 5556666      8999999876654443

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.49  E-value=3.3e-13  Score=98.11  Aligned_cols=112  Identities=13%  Similarity=0.096  Sum_probs=91.2

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceE-----EecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCc
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVI-----NCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSL   88 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~-----~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~   88 (148)
                      ..+++|++.  +.++++++.++.|++||+.++  +.+.     .+.+|...+.+++|+|+++.+++++.++.+++||+++
T Consensus       125 ~~~~~~s~~--~~~~~~~~~~~~i~~~d~~~g--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~  200 (433)
T 3bws_A          125 PKSVRFIDN--TRLAIPLLEDEGMDVLDINSG--QTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKT  200 (433)
T ss_dssp             BCCCEESSS--SEEEEEBTTSSSEEEEETTTC--CEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTT
T ss_pred             ceEEEEeCC--CeEEEEeCCCCeEEEEECCCC--eEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCC
Confidence            346778883  788888788889999999987  6655     3456888999999999999999999999999999987


Q ss_pred             c-----cc---ccceEEEEccCCCEEEEEe-cCCceecCeeEEEeecCCCcceecc
Q psy7062          89 C-----FI---QQVNALRITPDKQLLASAE-ELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        89 ~-----~~---~~i~~~~~sp~~~~l~~~~-~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                      .     +.   ..+.+++|+|+++.+++++ .++      .|++||+++.+.....
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~------~i~~~d~~~~~~~~~~  250 (433)
T 3bws_A          201 LAYKATVDLTGKWSKILLYDPIRDLVYCSNWISE------DISVIDRKTKLEIRKT  250 (433)
T ss_dssp             CCEEEEEECSSSSEEEEEEETTTTEEEEEETTTT------EEEEEETTTTEEEEEC
T ss_pred             ceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCC------cEEEEECCCCcEEEEe
Confidence            6     22   6789999999999886555 666      8999999876654433

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.48  E-value=5.3e-12  Score=92.33  Aligned_cols=109  Identities=14%  Similarity=0.077  Sum_probs=85.6

Q ss_pred             cEEEEEeCCCCccEEEEEecCC---eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEE-EEeCCC--cEEEEECC
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQ---HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMF-TGGEDC--RARIWDLS   87 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~---~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~-~~~~~~--~i~l~d~~   87 (148)
                      ...++|+|+  ++.|++++.++   .|++||++++  +. ..+..|...+.+++|+|||+.++ +++.++  .|++||+.
T Consensus       181 v~~~~~Spd--g~~la~~s~~~~~~~i~~~d~~tg--~~-~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~  255 (415)
T 2hqs_A          181 LMSPAWSPD--GSKLAYVTFESGRSALVIQTLANG--AV-RQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLA  255 (415)
T ss_dssp             EEEEEECTT--SSEEEEEECTTSSCEEEEEETTTC--CE-EEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT
T ss_pred             ceeeEEcCC--CCEEEEEEecCCCcEEEEEECCCC--cE-EEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECC
Confidence            457788888  88888888775   9999999987  44 35666888999999999999777 666655  49999998


Q ss_pred             cc----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          88 LC----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        88 ~~----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                      ++    +.   ..+.+++|+|+|+.|+.++.++   ...+|++||+....
T Consensus       256 ~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~---g~~~i~~~d~~~~~  302 (415)
T 2hqs_A          256 SGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQA---GRPQVYKVNINGGA  302 (415)
T ss_dssp             TCCEEECCCCSSCEEEEEECTTSSEEEEEECTT---SSCEEEEEETTSSC
T ss_pred             CCCEEeCcCCCCcccceEECCCCCEEEEEECCC---CCcEEEEEECCCCC
Confidence            76    32   6688999999999988887532   14478888987654

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.44  E-value=3.8e-12  Score=90.93  Aligned_cols=100  Identities=15%  Similarity=0.106  Sum_probs=77.9

Q ss_pred             ccEEEEEe--cCCeEEEEeCCC-CCCCceEEecCCCCCEEEEEEcc---CCCEEEEEeCCCcEEEEECCcc-----cc--
Q psy7062          25 VEMVAALG--GYQHIRMYDFGS-NNPNPVINCEGVSKNVVEVGFQE---DGKWMFTGGEDCRARIWDLSLC-----FI--   91 (148)
Q Consensus        25 ~~~l~~~~--~d~~v~~~d~~~-~~~~~~~~~~~~~~~i~~~~~sp---~~~~l~~~~~~~~i~l~d~~~~-----~~--   91 (148)
                      ++++.+++  .|+.|++|++.. +  +.+....+|...+..++|+|   ++..+++++.|++|++||++++     |.  
T Consensus       145 g~lv~ss~~g~d~~V~~~~~s~dG--~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~  222 (356)
T 2w18_A          145 RRLVSSSGTLSDQQVEVMTFAEDG--GGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHID  222 (356)
T ss_dssp             TEEEEEESSSTTCEEEEEEECTTS--CEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred             CcEEEecccCCCCcEEEEEECCCC--ceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCC
Confidence            55555522  488999999954 5  67778888999898999999   7799999999999999999988     32  


Q ss_pred             ----ccceEEEEccCCCEEEE------------EecCCceecCeeEEEeecCCCcce
Q psy7062          92 ----QQVNALRITPDKQLLAS------------AEELSCCYCGAAVFVYNSCYPAAV  132 (148)
Q Consensus        92 ----~~i~~~~~sp~~~~l~~------------~~~d~~~~~~~~i~~~d~~~~~~~  132 (148)
                          ..+.+++|+|+++.+++            ++.|+      +|++||..+....
T Consensus       223 ~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~------tIklWd~~tgk~l  273 (356)
T 2w18_A          223 DSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVF------QLIVINPKTTLSV  273 (356)
T ss_dssp             C---CCCEEEEEEETTEEEEEEC------------CCE------EEEEEETTTTEEE
T ss_pred             CcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCc------EEEEEECCCCEEE
Confidence                35667799999998754            44544      8999998876543

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.42  E-value=2.9e-12  Score=96.84  Aligned_cols=110  Identities=12%  Similarity=0.061  Sum_probs=89.9

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEEC--Ccc---
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL--SLC---   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~--~~~---   89 (148)
                      +..+++++  +.++++++.+++|.+||..++  +.+.++..+.. +..++++|+|+++++++.+++|.+||+  .+.   
T Consensus       141 ~~~~~~p~--~~~~vs~~~d~~V~v~D~~t~--~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~  215 (543)
T 1nir_A          141 QLNDLDLP--NLFSVTLRDAGQIALVDGDSK--KIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKV  215 (543)
T ss_dssp             CCSCCCGG--GEEEEEEGGGTEEEEEETTTC--CEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEE
T ss_pred             cccccCCC--CEEEEEEcCCCeEEEEECCCc--eEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEE
Confidence            34456665  789999889999999999998  78888874333 889999999999999999999999999  665   


Q ss_pred             --cc--ccceEEEEcc----CCCEEEEEec-CCceecCeeEEEeecCCCcceecc
Q psy7062          90 --FI--QQVNALRITP----DKQLLASAEE-LSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        90 --~~--~~i~~~~~sp----~~~~l~~~~~-d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                        +.  ..+..++|+|    +++++++++. ++      +|.+||..+.+....+
T Consensus       216 ~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~------~v~v~D~~t~~~~~~i  264 (543)
T 1nir_A          216 AEIKIGIEARSVESSKFKGYEDRYTIAGAYWPP------QFAIMDGETLEPKQIV  264 (543)
T ss_dssp             EEEECCSEEEEEEECCSTTCTTTEEEEEEEESS------EEEEEETTTCCEEEEE
T ss_pred             EEEecCCCcceEEeCCCcCCCCCEEEEEEccCC------eEEEEeccccccceee
Confidence              22  6679999999    9999999884 45      8999998877655443

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.38  E-value=4.6e-11  Score=87.33  Aligned_cols=110  Identities=10%  Similarity=0.068  Sum_probs=84.8

Q ss_pred             cEEEEEeCCCCccEEE-EEecCC--eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeC-CC--cEEEEECC
Q psy7062          14 QISTVFDSKHLVEMVA-ALGGYQ--HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE-DC--RARIWDLS   87 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~-~~~~d~--~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-~~--~i~l~d~~   87 (148)
                      ...++|+|+  ++.|+ +++.++  .|.+||++++  + ...+..|...+..++|+|||+.++.++. ++  .+++||+.
T Consensus       225 ~~~~~~spd--g~~la~~~~~~g~~~i~~~d~~~~--~-~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~  299 (415)
T 2hqs_A          225 NGAPAFSPD--GSKLAFALSKTGSLNLYVMDLASG--Q-IRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNIN  299 (415)
T ss_dssp             EEEEEECTT--SSEEEEEECTTSSCEEEEEETTTC--C-EEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT
T ss_pred             ccCEEEcCC--CCEEEEEEecCCCceEEEEECCCC--C-EEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECC
Confidence            357888888  77666 555554  5999999887  4 4667778889999999999998888775 44  67788987


Q ss_pred             cc----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          88 LC----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        88 ~~----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                      ++    +.   ..+..++|+|+|++|+.++.+.   ....|++||+.+.+.
T Consensus       300 ~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~---g~~~i~~~d~~~~~~  347 (415)
T 2hqs_A          300 GGAPQRITWEGSQNQDADVSSDGKFMVMVSSNG---GQQHIAKQDLATGGV  347 (415)
T ss_dssp             SSCCEECCCSSSEEEEEEECTTSSEEEEEEECS---SCEEEEEEETTTCCE
T ss_pred             CCCEEEEecCCCcccCeEECCCCCEEEEEECcC---CceEEEEEECCCCCE
Confidence            76    22   6678899999999999888653   245899999986554

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.31  E-value=3.1e-11  Score=84.75  Aligned_cols=107  Identities=9%  Similarity=0.116  Sum_probs=80.7

Q ss_pred             CcEEEEEeCCCCccEEEEEecC-CeEEEEeCC--CCCCCceEEecCCCCCEEEEEEccCCCEEEEEeC-CCcEEEEECC-
Q psy7062          13 GQISTVFDSKHLVEMVAALGGY-QHIRMYDFG--SNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE-DCRARIWDLS-   87 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d-~~v~~~d~~--~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-~~~i~l~d~~-   87 (148)
                      .+..++|+++  +++|++++.+ +.+.+|+++  ++..+.+..+..+. .+..++|+|+++.+++++. ++.+.+||+. 
T Consensus        39 ~~~~~~~spd--g~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~  115 (343)
T 1ri6_A           39 QVQPMVVSPD--KRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLED  115 (343)
T ss_dssp             CCCCEEECTT--SSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred             CCceEEECCC--CCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCC
Confidence            3567888887  7777776766 899999998  44222344554333 7889999999998876665 7889999993 


Q ss_pred             --cc-----cc--ccceEEEEccCCCEEEEEe-cCCceecCeeEEEeecCC
Q psy7062          88 --LC-----FI--QQVNALRITPDKQLLASAE-ELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        88 --~~-----~~--~~i~~~~~sp~~~~l~~~~-~d~~~~~~~~i~~~d~~~  128 (148)
                        ..     +.  ..+.+++|+|+++++++++ .++      .|.+||+..
T Consensus       116 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~------~v~~~d~~~  160 (343)
T 1ri6_A          116 GLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQD------RICLFTVSD  160 (343)
T ss_dssp             TEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGT------EEEEEEECT
T ss_pred             CccccccccccCCCCceEEEECCCCCEEEEecCCCC------EEEEEEecC
Confidence              32     22  5688899999999888877 655      899999986

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.30  E-value=6.9e-11  Score=91.48  Aligned_cols=107  Identities=12%  Similarity=0.176  Sum_probs=84.8

Q ss_pred             CcEEEEEeCCCCccEEEEEec-CC-----eEEEEeCCCCCCCceEEecCCCC------------------------CEEE
Q psy7062          13 GQISTVFDSKHLVEMVAALGG-YQ-----HIRMYDFGSNNPNPVINCEGVSK------------------------NVVE   62 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~-d~-----~v~~~d~~~~~~~~~~~~~~~~~------------------------~i~~   62 (148)
                      ....++|+|+  |+.|++++. ++     +|.+||+.++  +....+..+..                        .+..
T Consensus        38 ~~~~~~~Spd--G~~la~~~~~d~~~~~~~i~~~d~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  113 (741)
T 2ecf_A           38 TLMKPKVAPD--GSRVTFLRGKDSDRNQLDLWSYDIGSG--QTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVD  113 (741)
T ss_dssp             CCEEEEECTT--SSEEEEEECCSSCTTEEEEEEEETTTC--CEEEEECGGGTC--------------------CCEESCC
T ss_pred             CCCCceEecC--CCEEEEEeccCCCCcccEEEEEECCCC--ceeEccchhhcccccccccchhhhhhhhhhhccccCcce
Confidence            3568899998  889998887 77     8999999988  55555443322                        3778


Q ss_pred             EEEccCCCEEEEEeCCCcEEEEECCcc-------cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          63 VGFQEDGKWMFTGGEDCRARIWDLSLC-------FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        63 ~~~sp~~~~l~~~~~~~~i~l~d~~~~-------~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                      ++|||||+.+++++. +.+++||+.++       +.   ..+..++|+|||++|+.++. +      .|++||+.+...
T Consensus       114 ~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~------~i~~~d~~~g~~  184 (741)
T 2ecf_A          114 YQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-R------NLWVIDLASGRQ  184 (741)
T ss_dssp             CEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-T------EEEEEETTTTEE
T ss_pred             eEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-C------cEEEEecCCCCE
Confidence            999999999999886 89999999653       22   66889999999999998874 3      799999876543

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.25  E-value=2.5e-11  Score=93.75  Aligned_cols=106  Identities=15%  Similarity=0.192  Sum_probs=83.9

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCC---CEEEEEEccCCCEEEEEeC---------CCcE
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSK---NVVEVGFQEDGKWMFTGGE---------DCRA   81 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~---~i~~~~~sp~~~~l~~~~~---------~~~i   81 (148)
                      ....+|+++  ++++++ +.|+++++||+.++  +....+..+..   .+..++|||||+.++.++.         ++.+
T Consensus        18 ~~~~~~s~d--g~~~~~-~~d~~i~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i   92 (719)
T 1z68_A           18 TFFPNWISG--QEYLHQ-SADNNIVLYNIETG--QSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATY   92 (719)
T ss_dssp             CCCCEESSS--SEEEEE-CTTSCEEEEESSSC--CEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEE
T ss_pred             CCccEECCC--CeEEEE-cCCCCEEEEEcCCC--cEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEE
Confidence            356788888  677776 67999999999998  55555543332   3889999999999988876         6899


Q ss_pred             EEEECCcc-c---c---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          82 RIWDLSLC-F---I---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        82 ~l~d~~~~-~---~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                      ++||+.++ .   .   ..+..++|||||+.|+.+. ++      .|++||+.+...
T Consensus        93 ~~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~-~~------~i~~~~~~~g~~  142 (719)
T 1z68_A           93 YIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVY-QN------NIYLKQRPGDPP  142 (719)
T ss_dssp             EEEETTTTEECCSSCCCSSBCCEEECSSTTCEEEEE-TT------EEEEESSTTSCC
T ss_pred             EEEECCCCccccceecCcccccceECCCCCEEEEEE-CC------eEEEEeCCCCCc
Confidence            99999877 3   3   6688899999999999885 44      799999876543

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.25  E-value=4.4e-11  Score=90.49  Aligned_cols=101  Identities=15%  Similarity=0.094  Sum_probs=82.6

Q ss_pred             EEEEEeCCCCccEEEEEecC----CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCC--cEEEEECCc
Q psy7062          15 ISTVFDSKHLVEMVAALGGY----QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDC--RARIWDLSL   88 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d----~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~--~i~l~d~~~   88 (148)
                      ..++|+|+  |+.+++++.+    ..|.+||+.++  + ...+..|...+..++|||||+.+++++.++  .|++||+.+
T Consensus       153 ~~~~~spD--G~~la~~~~~~~~~~~i~~~d~~~g--~-~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~  227 (582)
T 3o4h_A          153 FGFVSDIR--GDLIAGLGFFGGGRVSLFTSNLSSG--G-LRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRD  227 (582)
T ss_dssp             CEEEEEEE--TTEEEEEEEEETTEEEEEEEETTTC--C-CEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTT
T ss_pred             ceEEECCC--CCEEEEEEEcCCCCeEEEEEcCCCC--C-ceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCC
Confidence            57788888  8899977777    68999999987  4 346677888899999999999999888888  899999987


Q ss_pred             c----cc---ccceEEE--------EccCCCEEEEEecCCceecCeeEEEeec
Q psy7062          89 C----FI---QQVNALR--------ITPDKQLLASAEELSCCYCGAAVFVYNS  126 (148)
Q Consensus        89 ~----~~---~~i~~~~--------~sp~~~~l~~~~~d~~~~~~~~i~~~d~  126 (148)
                      +    +.   ..+..+.        |+|||+.+++++.++      ++++|++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g------~~~l~~~  274 (582)
T 3o4h_A          228 GSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREG------RSAVFID  274 (582)
T ss_dssp             CCEEECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETT------EEEEEET
T ss_pred             CcEEEccCCCcChhhhhhccccceeEcCCCcEEEEEEcCC------cEEEEEE
Confidence            6    11   3344455        999998888898877      8999998

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.25  E-value=5.7e-10  Score=79.49  Aligned_cols=108  Identities=11%  Similarity=0.203  Sum_probs=76.5

Q ss_pred             CcEEEEEeCCCCccEEEEEe-cCCeEEEEeCCCCCCCceEEec---CCCCCEEEEEEccCCCEEEEEeCC--CcEEEEEC
Q psy7062          13 GQISTVFDSKHLVEMVAALG-GYQHIRMYDFGSNNPNPVINCE---GVSKNVVEVGFQEDGKWMFTGGED--CRARIWDL   86 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~-~d~~v~~~d~~~~~~~~~~~~~---~~~~~i~~~~~sp~~~~l~~~~~~--~~i~l~d~   86 (148)
                      ++..++|+|+  ++++++++ .++.|.+||++++....+..+.   .+......++|+|||++++++..+  +.+.+|++
T Consensus       212 ~~~~~~~spd--g~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~  289 (361)
T 3scy_A          212 GPRHLIFNSD--GKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKV  289 (361)
T ss_dssp             CEEEEEECTT--SSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEE
T ss_pred             CCeEEEEcCC--CCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEE
Confidence            3567889998  77666656 5889999999865212233332   233557899999999988776654  89999999


Q ss_pred             C--cc-c------c--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          87 S--LC-F------I--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        87 ~--~~-~------~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                      .  ++ +      .  ..+..++|+|++++|++++.+.     ..|.+|++.
T Consensus       290 ~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~-----~~v~v~~~d  336 (361)
T 3scy_A          290 DETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDT-----NVIQIFERD  336 (361)
T ss_dssp             CTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTT-----TEEEEEEEC
T ss_pred             cCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEECCC-----CCEEEEEEE
Confidence            6  23 1      1  3678999999999998888432     268886443

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.25  E-value=1.2e-10  Score=88.21  Aligned_cols=110  Identities=10%  Similarity=-0.026  Sum_probs=81.1

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC----CcEEEEECCc
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED----CRARIWDLSL   88 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~----~~i~l~d~~~   88 (148)
                      ++...+|+++..+.++++++. +.+.+||++++  +...... +..  .+++|||||+.+++++.+    ..|++||+.+
T Consensus       111 ~~~~~~~s~dg~~~~~~s~~~-~~~~l~d~~~g--~~~~l~~-~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~  184 (582)
T 3o4h_A          111 PMRILSGVDTGEAVVFTGATE-DRVALYALDGG--GLRELAR-LPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSS  184 (582)
T ss_dssp             SBEEEEEEECSSCEEEEEECS-SCEEEEEEETT--EEEEEEE-ESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTT
T ss_pred             CceeeeeCCCCCeEEEEecCC-CCceEEEccCC--cEEEeec-CCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCC
Confidence            455678888866667777444 44559999987  4333332 333  788999999999987776    7899999987


Q ss_pred             c----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062          89 C----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV  132 (148)
Q Consensus        89 ~----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~  132 (148)
                      +    +.   ..+..++|+|||+.|+++..++    ..+|++||+.+.+..
T Consensus       185 g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~----~~~i~~~d~~~~~~~  231 (582)
T 3o4h_A          185 GGLRVFDSGEGSFSSASISPGMKVTAGLETAR----EARLVTVDPRDGSVE  231 (582)
T ss_dssp             CCCEEECCSSCEEEEEEECTTSCEEEEEECSS----CEEEEEECTTTCCEE
T ss_pred             CCceEeecCCCccccceECCCCCEEEEccCCC----eeEEEEEcCCCCcEE
Confidence            7    33   5678999999999999666655    457999998866543

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.25  E-value=4e-10  Score=79.52  Aligned_cols=111  Identities=15%  Similarity=0.098  Sum_probs=86.4

Q ss_pred             cEEEEEeCCCCccEEEEEe--cCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--
Q psy7062          14 QISTVFDSKHLVEMVAALG--GYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~--~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--   89 (148)
                      +..++|+++  ++.+++++  .++.|.+||.+++  +.+..+..+...+..++|+|+++.+++++.++.+.+||..++  
T Consensus       143 ~~~~~~s~d--g~~l~~~~~~~~~~i~~~d~~~~--~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~  218 (353)
T 3vgz_A          143 PRELVADDA--TNTVYISGIGKESVIWVVDGGNI--KLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKI  218 (353)
T ss_dssp             EEEEEEETT--TTEEEEEEESSSCEEEEEETTTT--EEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEE
T ss_pred             CceEEECCC--CCEEEEEecCCCceEEEEcCCCC--ceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeE
Confidence            466888888  66555544  4778999999988  777777656666888999999999999999999999999887  


Q ss_pred             ---cc-------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCccee
Q psy7062          90 ---FI-------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVV  133 (148)
Q Consensus        90 ---~~-------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~  133 (148)
                         +.       ..+..++|+|+++.++.++.+     ...|.+||..+.+...
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-----~~~v~~~d~~~~~~~~  267 (353)
T 3vgz_A          219 LSRKKLLDDGKEHFFINISLDTARQRAFITDSK-----AAEVLVVDTRNGNILA  267 (353)
T ss_dssp             EEEEECCCSSSCCCEEEEEEETTTTEEEEEESS-----SSEEEEEETTTCCEEE
T ss_pred             EEEEEcCCCCCCcccceEEECCCCCEEEEEeCC-----CCEEEEEECCCCcEEE
Confidence               11       235678999999987777653     2389999998766543

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.24  E-value=3.8e-10  Score=79.64  Aligned_cols=112  Identities=10%  Similarity=0.035  Sum_probs=85.8

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecC----CCCCEEEEEEccCCCEEEEEeC-CCcEEEEECCc
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEG----VSKNVVEVGFQEDGKWMFTGGE-DCRARIWDLSL   88 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~----~~~~i~~~~~sp~~~~l~~~~~-~~~i~l~d~~~   88 (148)
                      +..++|+++  ++.+++++.++.+.+||..++  +.+..+..    +...+..++|+|+++.++.++. ++.+.+||..+
T Consensus       187 ~~~~~~s~d--g~~l~~~~~~~~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~  262 (353)
T 3vgz_A          187 STGLALDSE--GKRLYTTNADGELITIDTADN--KILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRN  262 (353)
T ss_dssp             CCCCEEETT--TTEEEEECTTSEEEEEETTTT--EEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTT
T ss_pred             cceEEECCC--CCEEEEEcCCCeEEEEECCCC--eEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence            466788887  777788788999999999988  66666543    4556888999999997766655 48999999987


Q ss_pred             c-----cc-ccceEEEEccCCCEEEEEe-cCCceecCeeEEEeecCCCcceecc
Q psy7062          89 C-----FI-QQVNALRITPDKQLLASAE-ELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        89 ~-----~~-~~i~~~~~sp~~~~l~~~~-~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                      +     +. .....++|+|++++++.++ .++      .|.+||..+.+....+
T Consensus       263 ~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~------~v~~~d~~~~~~~~~~  310 (353)
T 3vgz_A          263 GNILAKVAAPESLAVLFNPARNEAYVTHRQAG------KVSVIDAKSYKVVKTF  310 (353)
T ss_dssp             CCEEEEEECSSCCCEEEETTTTEEEEEETTTT------EEEEEETTTTEEEEEE
T ss_pred             CcEEEEEEcCCCceEEECCCCCEEEEEECCCC------eEEEEECCCCeEEEEE
Confidence            7     22 4446799999999776666 445      8999999876654433

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.24  E-value=5.3e-10  Score=76.52  Aligned_cols=103  Identities=8%  Similarity=-0.028  Sum_probs=77.0

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCC-CCCCceEEecCC-CCCEEEEEEccCCCEEEEEeC--CC--cEEEEECC
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGS-NNPNPVINCEGV-SKNVVEVGFQEDGKWMFTGGE--DC--RARIWDLS   87 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~-~~~~~~~~~~~~-~~~i~~~~~sp~~~~l~~~~~--~~--~i~l~d~~   87 (148)
                      ..+++|+|+  +++|+++ .++.+.+||+++ +  +.......+ ...+.+++|+|+++.+++++.  ++  .+..++..
T Consensus        44 v~~~~~spd--g~~l~~~-~~~~i~~~d~~~~~--~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~  118 (297)
T 2ojh_A           44 FEAPNWSPD--GKYLLLN-SEGLLYRLSLAGDP--SPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPST  118 (297)
T ss_dssp             CEEEEECTT--SSEEEEE-ETTEEEEEESSSCC--SCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETT
T ss_pred             eEeeEECCC--CCEEEEE-cCCeEEEEeCCCCC--CceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECC
Confidence            567888888  8888885 488999999998 7  555555555 367888999999999999883  33  45555555


Q ss_pred             cc----cc--ccceEEEEccCCCEEE-EEecCCceecCeeEEEeecC
Q psy7062          88 LC----FI--QQVNALRITPDKQLLA-SAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        88 ~~----~~--~~i~~~~~sp~~~~l~-~~~~d~~~~~~~~i~~~d~~  127 (148)
                      ..    +.  ..+..++|+|+++.|+ ++..++      .+.+|++.
T Consensus       119 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~------~~~l~~~~  159 (297)
T 2ojh_A          119 GGTPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQ------VFDIYSMD  159 (297)
T ss_dssp             CCCCEECCSSSSEEEEEECTTSSEEEEEEEETT------EEEEEEEE
T ss_pred             CCceEEeecCCCccceEECCCCCEEEEEECCCC------ceEEEEEE
Confidence            44    22  5588889999999877 566666      67888754

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.23  E-value=1.6e-11  Score=94.77  Aligned_cols=107  Identities=11%  Similarity=0.108  Sum_probs=85.5

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCC---CEEEEEEccCCCEEEEEeCC---------CcE
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSK---NVVEVGFQEDGKWMFTGGED---------CRA   81 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~---~i~~~~~sp~~~~l~~~~~~---------~~i   81 (148)
                      ...++|+|+  |+++++ +.|+++++||+.++  +....+..|..   .+..++|||||+.+++++.+         +.+
T Consensus        19 ~~~~~~spd--g~~~~~-~~dg~i~~~d~~~g--~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i   93 (723)
T 1xfd_A           19 DPEAKWISD--TEFIYR-EQKGTVRLWNVETN--TSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYY   93 (723)
T ss_dssp             CCCCCBSSS--SCBCCC-CSSSCEEEBCGGGC--CCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEE
T ss_pred             ccccEEcCC--CcEEEE-eCCCCEEEEECCCC--cEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeE
Confidence            456778887  777777 78999999999998  66666666554   48999999999999998764         678


Q ss_pred             EEEECCcc----cc------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062          82 RIWDLSLC----FI------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV  132 (148)
Q Consensus        82 ~l~d~~~~----~~------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~  132 (148)
                      ++||+.++    +.      ..+..++|||||+.|+.++. +      .|++||+.+.+..
T Consensus        94 ~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~------~i~~~~~~~g~~~  147 (723)
T 1xfd_A           94 VLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-N------NIYYCAHVGKQAI  147 (723)
T ss_dssp             EEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-T------EEEEESSSSSCCE
T ss_pred             EEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-C------eEEEEECCCCceE
Confidence            89999877    22      23788999999999998875 3      7999998865443

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.23  E-value=4.8e-10  Score=76.73  Aligned_cols=115  Identities=8%  Similarity=0.063  Sum_probs=83.1

Q ss_pred             cEEEEEeCCCCccEEE-EEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEe-CCCcEEEEECCc--c
Q psy7062          14 QISTVFDSKHLVEMVA-ALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGG-EDCRARIWDLSL--C   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~-~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-~~~~i~l~d~~~--~   89 (148)
                      ...++|+++  ++.++ +++.++.+++|+++... .....+..+...+..++|+|+++.++.++ .++.+++|++..  .
T Consensus       131 ~~~~~~spd--g~~l~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~  207 (297)
T 2ojh_A          131 SYWHGWSPD--GKSFTYCGIRDQVFDIYSMDIDS-GVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGS  207 (297)
T ss_dssp             EEEEEECTT--SSEEEEEEEETTEEEEEEEETTT-CCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS
T ss_pred             ccceEECCC--CCEEEEEECCCCceEEEEEECCC-CcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCC
Confidence            455678887  66555 66788999999865321 34556666888899999999999877665 588889998752  2


Q ss_pred             ----cc---ccceEEEEccCCCEEEEEecCCcee-----cCeeEEEeecCCCcc
Q psy7062          90 ----FI---QQVNALRITPDKQLLASAEELSCCY-----CGAAVFVYNSCYPAA  131 (148)
Q Consensus        90 ----~~---~~i~~~~~sp~~~~l~~~~~d~~~~-----~~~~i~~~d~~~~~~  131 (148)
                          +.   ..+..+.|+|++++|+.++.++...     ....|++||+.+.+.
T Consensus       208 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~  261 (297)
T 2ojh_A          208 SVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNV  261 (297)
T ss_dssp             CEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSC
T ss_pred             CcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCc
Confidence                22   5678899999999998887653110     124799999886543

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.22  E-value=2.2e-10  Score=86.56  Aligned_cols=121  Identities=11%  Similarity=0.040  Sum_probs=91.0

Q ss_pred             eCCCCccEEEEEe-cCCeEEEEeCCCCC-----CCceEEecCCCCCEEEEEEccCCCEEEEEe-------CCCcEEEEEC
Q psy7062          20 DSKHLVEMVAALG-GYQHIRMYDFGSNN-----PNPVINCEGVSKNVVEVGFQEDGKWMFTGG-------EDCRARIWDL   86 (148)
Q Consensus        20 ~~~~~~~~l~~~~-~d~~v~~~d~~~~~-----~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-------~~~~i~l~d~   86 (148)
                      +++ .+.+++++. .+++|.+||.++.+     .+.+.++.+|...+..++++|+++.+.+++       .+++|.+||+
T Consensus       378 ~p~-~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~  456 (543)
T 1nir_A          378 HPK-YGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDL  456 (543)
T ss_dssp             ETT-TEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEET
T ss_pred             CCC-CccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEEC
Confidence            444 267777754 57899999999811     278899999988888999999999999987       2679999999


Q ss_pred             Ccc------c--------c---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccCc--ccCcc
Q psy7062          87 SLC------F--------I---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNT--LVKPQ  142 (148)
Q Consensus        87 ~~~------~--------~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~--~~~~~  142 (148)
                      .+.      +        .   .++..+.|+|+|+.++++...+.- ....|.+||..+.+....+..  +++|.
T Consensus       457 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~-~~~~i~v~D~~t~~~~~~i~~~~~~~p~  530 (543)
T 1nir_A          457 KNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKN-DSSALVVVDDKTLKLKAVVKDPRLITPT  530 (543)
T ss_dssp             TCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTT-SCCEEEEEETTTTEEEEEECCTTCCSEE
T ss_pred             CCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCC-CCCeEEEEECCCceEEEeecCCCccCCC
Confidence            876      2        1   568899999999988877431100 123899999999887665553  55553

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.21  E-value=7.4e-10  Score=77.47  Aligned_cols=69  Identities=9%  Similarity=0.016  Sum_probs=56.7

Q ss_pred             CEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          59 NVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        59 ~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                      .+.+++|+|+++.++++  ++.+.+||+.++     +.  ..+.+++|+|++++|++++.++      .|.+||+.+.+.
T Consensus       242 ~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~------~i~v~d~~~~~~  313 (337)
T 1pby_B          242 FYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALG------DLAAYDAETLEK  313 (337)
T ss_dssp             CEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEESBSS------EEEEEETTTCCE
T ss_pred             ceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCCceeeEEECCCCCEEEEEcCCC------cEEEEECcCCcE
Confidence            34568999999998888  689999999876     22  6688999999999988887766      899999987766


Q ss_pred             eecc
Q psy7062         132 VVAS  135 (148)
Q Consensus       132 ~~~~  135 (148)
                      ...+
T Consensus       314 ~~~~  317 (337)
T 1pby_B          314 KGQV  317 (337)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            5544

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.20  E-value=8.3e-10  Score=78.17  Aligned_cols=108  Identities=8%  Similarity=0.144  Sum_probs=75.0

Q ss_pred             CcEEEEEeCCCCccEE-EEEecCCeEEEEeCCCCCCCc--eEEecCCC------CCEEEEEEccCCCEE-EEEeCCCcEE
Q psy7062          13 GQISTVFDSKHLVEMV-AALGGYQHIRMYDFGSNNPNP--VINCEGVS------KNVVEVGFQEDGKWM-FTGGEDCRAR   82 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l-~~~~~d~~v~~~d~~~~~~~~--~~~~~~~~------~~i~~~~~sp~~~~l-~~~~~~~~i~   82 (148)
                      ++..++|+|+  ++++ ++...++.+.+|+++....+.  +..+....      ..+..++|+|||+++ ++...++.+.
T Consensus       188 ~p~~~~~spd--g~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~  265 (347)
T 3hfq_A          188 GPRHLVFSPD--GQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLA  265 (347)
T ss_dssp             CEEEEEECTT--SSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEE
T ss_pred             CCceEEECCC--CCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEE
Confidence            3556889998  6744 444567899999987521122  22333222      348889999999977 5556689999


Q ss_pred             EEECCcc--------cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          83 IWDLSLC--------FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        83 l~d~~~~--------~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                      +||+...        +.   ..+..++|+|++++|++++.+.     ..|.+|++.
T Consensus       266 v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~-----~~v~v~~~d  316 (347)
T 3hfq_A          266 VFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNT-----DNATLYARD  316 (347)
T ss_dssp             EEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTT-----TEEEEEEEC
T ss_pred             EEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCC-----CcEEEEEEe
Confidence            9999732        11   3578999999999988887642     279999543

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.20  E-value=2.3e-10  Score=92.09  Aligned_cols=96  Identities=10%  Similarity=0.071  Sum_probs=80.2

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCC----------cEEE
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDC----------RARI   83 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~----------~i~l   83 (148)
                      ...++|+|+  ++.|++++.++.+++||++++  +......+|...+..++|+|||+++++++.++          .+++
T Consensus       381 ~~~~~~SpD--G~~la~~~~~~~v~~~d~~tg--~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l  456 (1045)
T 1k32_A          381 VFAMGVDRN--GKFAVVANDRFEIMTVDLETG--KPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHV  456 (1045)
T ss_dssp             EEEEEECTT--SSEEEEEETTSEEEEEETTTC--CEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEE
T ss_pred             eeeeEECCC--CCEEEEECCCCeEEEEECCCC--ceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEE
Confidence            457888888  899999899999999999988  66666667888899999999999998876643          8999


Q ss_pred             EECCcc----cc---ccceEEEEccCCCEEEEEecCC
Q psy7062          84 WDLSLC----FI---QQVNALRITPDKQLLASAEELS  113 (148)
Q Consensus        84 ~d~~~~----~~---~~i~~~~~sp~~~~l~~~~~d~  113 (148)
                      ||+.++    +.   ..+..++|+|+|+.|+.++.++
T Consensus       457 ~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~~~  493 (1045)
T 1k32_A          457 YDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRS  493 (1045)
T ss_dssp             EETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCC
T ss_pred             EECCCCcEEEeeCCCcccCCceEcCCCCEEEEEeccc
Confidence            999876    22   5577899999999999888755

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.20  E-value=7.9e-10  Score=77.56  Aligned_cols=111  Identities=13%  Similarity=0.050  Sum_probs=79.8

Q ss_pred             EEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeC-CCcEEEEECCcc-c-c---
Q psy7062          18 VFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE-DCRARIWDLSLC-F-I---   91 (148)
Q Consensus        18 ~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-~~~i~l~d~~~~-~-~---   91 (148)
                      .|+.. .+.++++++.++.|.+||.+++  +.+..+..+...+ .++|+|+|+.+++++. ++.+.+||+.+. + .   
T Consensus         4 ~~~~~-~~~~~v~~~~~~~v~~~d~~~~--~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~   79 (331)
T 3u4y_A            4 MFQTT-SNFGIVVEQHLRRISFFSTDTL--EILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAI   79 (331)
T ss_dssp             ---CC-CCEEEEEEGGGTEEEEEETTTC--CEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEE
T ss_pred             eEcCC-CCEEEEEecCCCeEEEEeCccc--ceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEec
Confidence            34444 2566788788999999999988  7777766555666 9999999997766655 889999999876 2 2   


Q ss_pred             ---ccceE-EEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          92 ---QQVNA-LRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        92 ---~~i~~-~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                         ..... ++|+|++++++++..++   ....|.+||+.+.+.....
T Consensus        80 ~~~~~~~~~~~~s~dg~~l~~~~~~~---~~~~i~v~d~~~~~~~~~~  124 (331)
T 3u4y_A           80 QEGQSSMADVDITPDDQFAVTVTGLN---HPFNMQSYSFLKNKFISTI  124 (331)
T ss_dssp             EECSSCCCCEEECTTSSEEEECCCSS---SSCEEEEEETTTTEEEEEE
T ss_pred             ccCCCCccceEECCCCCEEEEecCCC---CcccEEEEECCCCCeEEEE
Confidence               34445 99999999988544421   1127999999876654433

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.18  E-value=2.5e-10  Score=80.33  Aligned_cols=103  Identities=12%  Similarity=0.080  Sum_probs=77.6

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEecCCC-CCEEEEEEccCCCEEE-EEeCCCcEEEEECCcc-----cc--c---
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVS-KNVVEVGFQEDGKWMF-TGGEDCRARIWDLSLC-----FI--Q---   92 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~-~~i~~~~~sp~~~~l~-~~~~~~~i~l~d~~~~-----~~--~---   92 (148)
                      +.++++++.+++|.+||..++  +.+..+..+. ..+..++|+|+++.++ +...++.+.+||+.++     +.  .   
T Consensus        11 ~~~~v~~~~~~~v~~~d~~~~--~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~   88 (349)
T 1jmx_B           11 HEYMIVTNYPNNLHVVDVASD--TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPG   88 (349)
T ss_dssp             CEEEEEEETTTEEEEEETTTT--EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTT
T ss_pred             CEEEEEeCCCCeEEEEECCCC--cEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccc
Confidence            788999899999999999988  7777766433 2567899999998664 5556889999999876     21  2   


Q ss_pred             ----cceEEEEccCCCEEEEEecCCc------eecCeeEEEeecCCC
Q psy7062          93 ----QVNALRITPDKQLLASAEELSC------CYCGAAVFVYNSCYP  129 (148)
Q Consensus        93 ----~i~~~~~sp~~~~l~~~~~d~~------~~~~~~i~~~d~~~~  129 (148)
                          .+..++|+|+++++++++.+..      ......|.+||+.+.
T Consensus        89 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~  135 (349)
T 1jmx_B           89 EVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADG  135 (349)
T ss_dssp             EEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGG
T ss_pred             cccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCc
Confidence                1788999999999999885400      000238999998763

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.18  E-value=8.1e-10  Score=77.51  Aligned_cols=106  Identities=14%  Similarity=0.129  Sum_probs=77.2

Q ss_pred             EEEEEeCCCCccEEEEEec-CCeEEEEeCCCCCCCc-eEEecCCCCCEEEEEEccCCCEEEEEeCCC---cEEEEECCcc
Q psy7062          15 ISTVFDSKHLVEMVAALGG-YQHIRMYDFGSNNPNP-VINCEGVSKNVVEVGFQEDGKWMFTGGEDC---RARIWDLSLC   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~-d~~v~~~d~~~~~~~~-~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~---~i~l~d~~~~   89 (148)
                      ..++|+++  ++.+++++. ++.+.+||.+++  +. ...+..+.....+++|+|+|+++++...++   .+.+||+.+.
T Consensus        43 ~~~~~s~d--g~~l~~~~~~~~~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~  118 (331)
T 3u4y_A           43 VDTAITSD--CSNVVVTSDFCQTLVQIETQLE--PPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKN  118 (331)
T ss_dssp             EEEEECSS--SCEEEEEESTTCEEEEEECSSS--SCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTT
T ss_pred             ceEEEcCC--CCEEEEEeCCCCeEEEEECCCC--ceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCC
Confidence            37888887  665554454 789999999988  55 566655555554499999999988655553   8999999877


Q ss_pred             -----cc--ccceEEEEccCCCEEEEEecCCceecCee-EEEeecCCC
Q psy7062          90 -----FI--QQVNALRITPDKQLLASAEELSCCYCGAA-VFVYNSCYP  129 (148)
Q Consensus        90 -----~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~-i~~~d~~~~  129 (148)
                           +.  .....++|+|+++++++++.+.     .. |.+|++...
T Consensus       119 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~-----~~~i~~~~~~~~  161 (331)
T 3u4y_A          119 KFISTIPIPYDAVGIAISPNGNGLILIDRSS-----ANTVRRFKIDAD  161 (331)
T ss_dssp             EEEEEEECCTTEEEEEECTTSSCEEEEEETT-----TTEEEEEEECTT
T ss_pred             CeEEEEECCCCccceEECCCCCEEEEEecCC-----CceEEEEEECCC
Confidence                 22  5578999999998766665431     15 899987643

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.17  E-value=2.2e-10  Score=88.37  Aligned_cols=96  Identities=15%  Similarity=-0.001  Sum_probs=72.3

Q ss_pred             cEEEEEeCCCCccEEEEEecC---------CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEE
Q psy7062          14 QISTVFDSKHLVEMVAALGGY---------QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIW   84 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d---------~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~   84 (148)
                      ...++|+|+  |+.|++++.+         +.+.+||++++....+.....|...+..++|||||+.++.++. +.+++|
T Consensus        63 v~~~~~SpD--g~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~  139 (723)
T 1xfd_A           63 AIRYEISPD--REYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYC  139 (723)
T ss_dssp             CSEEEECTT--SSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEE
T ss_pred             cceEEECCC--CCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEE
Confidence            467888998  8888887764         6788999998722112222334555888999999999998876 789999


Q ss_pred             ECCcc----cc----ccc------------------eEEEEccCCCEEEEEecC
Q psy7062          85 DLSLC----FI----QQV------------------NALRITPDKQLLASAEEL  112 (148)
Q Consensus        85 d~~~~----~~----~~i------------------~~~~~sp~~~~l~~~~~d  112 (148)
                      |+.++    +.    ..+                  .++.|+|||+.|+.++.+
T Consensus       140 ~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~  193 (723)
T 1xfd_A          140 AHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAIN  193 (723)
T ss_dssp             SSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEE
T ss_pred             ECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEEC
Confidence            99876    21    222                  689999999999998754

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.16  E-value=3.1e-10  Score=80.36  Aligned_cols=107  Identities=12%  Similarity=0.143  Sum_probs=77.1

Q ss_pred             CcEEEEEeCCCCccEEEEEec--CCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEe-CCCcEEEEECCcc
Q psy7062          13 GQISTVFDSKHLVEMVAALGG--YQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGG-EDCRARIWDLSLC   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~--d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-~~~~i~l~d~~~~   89 (148)
                      .+..++|+|+  ++++++...  ++.|.+||+.++..+.+..+..+...+..++|+|+|+++++++ .++.+.+||+...
T Consensus        41 ~p~~~a~spd--g~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~  118 (347)
T 3hfq_A           41 NPTYLALSAK--DCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAAD  118 (347)
T ss_dssp             CCCCEEECTT--CEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTT
T ss_pred             CcceEEEccC--CeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCC
Confidence            4567888997  665555332  5799999997762224445445677788999999999888887 6789999999632


Q ss_pred             -----cc-------c--------cceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          90 -----FI-------Q--------QVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        90 -----~~-------~--------~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                           +.       .        .+.+++|+|+++.+++...++      .|.+||+.
T Consensus       119 g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~------~v~~~~~~  170 (347)
T 3hfq_A          119 GALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSD------KVYVYNVS  170 (347)
T ss_dssp             SCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTT------EEEEEEEC
T ss_pred             CCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCC------EEEEEEEC
Confidence                 11       1        267799999999544444444      89999987

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.15  E-value=1e-09  Score=84.99  Aligned_cols=96  Identities=11%  Similarity=0.099  Sum_probs=75.1

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ...++|+|+  |+.|++++. +.|.+||+.++.......+..|...+..++|||||+.++.++ ++.|++||+.++    
T Consensus       111 v~~~~~SpD--g~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~  186 (741)
T 2ecf_A          111 IVDYQWSPD--AQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQ  186 (741)
T ss_dssp             SCCCEECTT--SSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEE
T ss_pred             cceeEECCC--CCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEE
Confidence            356788888  888888564 999999998761004556667788899999999999999887 458999999876    


Q ss_pred             cc---c-----------------cceEEEEccCCCEEEEEecCC
Q psy7062          90 FI---Q-----------------QVNALRITPDKQLLASAEELS  113 (148)
Q Consensus        90 ~~---~-----------------~i~~~~~sp~~~~l~~~~~d~  113 (148)
                      +.   .                 .+..+.|+|||++|++++.|+
T Consensus       187 ~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~  230 (741)
T 2ecf_A          187 LTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDE  230 (741)
T ss_dssp             CCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEEC
T ss_pred             eccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcC
Confidence            21   1                 147899999999999987654

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.15  E-value=1e-09  Score=76.75  Aligned_cols=106  Identities=12%  Similarity=-0.005  Sum_probs=77.5

Q ss_pred             cEEEEEecCCeEEEEeCCCCCCCceEEecCCCC--CEEEEEEccCCCEE-EEEeCCCcEEEEECCcc-----cc--c---
Q psy7062          26 EMVAALGGYQHIRMYDFGSNNPNPVINCEGVSK--NVVEVGFQEDGKWM-FTGGEDCRARIWDLSLC-----FI--Q---   92 (148)
Q Consensus        26 ~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~--~i~~~~~sp~~~~l-~~~~~~~~i~l~d~~~~-----~~--~---   92 (148)
                      +++++++.+++|.+||+.++  +.+..+.....  .+..++|+|+++.+ +++..++.+.+||+.++     +.  .   
T Consensus         2 ~~~v~~~~~~~v~~~d~~~~--~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~   79 (337)
T 1pby_B            2 DYILAPARPDKLVVIDTEKM--AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEE   79 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTT--EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTE
T ss_pred             cEEEEcCCCCeEEEEECCCC--cEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccc
Confidence            57888899999999999988  77776653221  47789999999866 45556789999999876     22  3   


Q ss_pred             ---cceEEEEccCCCEEEEEecCC----cee--cCeeEEEeecCCCccee
Q psy7062          93 ---QVNALRITPDKQLLASAEELS----CCY--CGAAVFVYNSCYPAAVV  133 (148)
Q Consensus        93 ---~i~~~~~sp~~~~l~~~~~d~----~~~--~~~~i~~~d~~~~~~~~  133 (148)
                         .+..++|+|+++.+++++...    .-.  ....|.+||..+.+...
T Consensus        80 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~  129 (337)
T 1pby_B           80 RVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRK  129 (337)
T ss_dssp             EEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEE
T ss_pred             ccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEE
Confidence               788899999999888885100    000  12389999998765443

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.14  E-value=7.4e-10  Score=86.25  Aligned_cols=104  Identities=14%  Similarity=0.102  Sum_probs=81.7

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCC-----EEEEEEccCCCEEEEEeCC---------C
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKN-----VVEVGFQEDGKWMFTGGED---------C   79 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~-----i~~~~~sp~~~~l~~~~~~---------~   79 (148)
                      ...+.|.++  ++++++ + |++|++||+.++  +....+.+|...     ...+.|||||+.++.++.+         +
T Consensus        19 ~~~~~w~~d--g~~~~~-~-~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~   92 (740)
T 4a5s_A           19 LYSLRWISD--HEYLYK-Q-ENNILVFNAEYG--NSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTA   92 (740)
T ss_dssp             CCCEEECSS--SEEEEE-E-TTEEEEEETTTC--CEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEE
T ss_pred             ccccEECCC--CcEEEE-c-CCcEEEEECCCC--ceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccce
Confidence            356788888  788888 4 899999999998  666666666532     2347899999999888765         5


Q ss_pred             cEEEEECCcc----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          80 RARIWDLSLC----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        80 ~i~l~d~~~~----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                      .+.+||+.++    +.   ..+...+|||||+.|+.+. ++      .|++||+....
T Consensus        93 ~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~-~~------~i~~~~~~~~~  143 (740)
T 4a5s_A           93 SYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVW-NN------DIYVKIEPNLP  143 (740)
T ss_dssp             EEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEE-TT------EEEEESSTTSC
T ss_pred             EEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEE-CC------eEEEEECCCCc
Confidence            6779999987    22   6688999999999998885 34      79999987654

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.12  E-value=4.7e-09  Score=74.74  Aligned_cols=107  Identities=13%  Similarity=0.155  Sum_probs=76.1

Q ss_pred             EEEEEeCCCCccEEEEEe-cCCeEEEEeCCCCCC----C-c------eEEecCCCCCEEEEEEccCCCEEEEEe-CCCcE
Q psy7062          15 ISTVFDSKHLVEMVAALG-GYQHIRMYDFGSNNP----N-P------VINCEGVSKNVVEVGFQEDGKWMFTGG-EDCRA   81 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~-~d~~v~~~d~~~~~~----~-~------~~~~~~~~~~i~~~~~sp~~~~l~~~~-~~~~i   81 (148)
                      ..++|+|+  ++.+++++ .++.+.+|+++....    + .      ......+...+..++|+|+|++++.++ .++.+
T Consensus       158 ~~~~~spd--g~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v  235 (361)
T 3scy_A          158 HCVRITPD--GKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTV  235 (361)
T ss_dssp             EEEEECTT--SSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEE
T ss_pred             eEEEECCC--CCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeE
Confidence            56889988  76554434 578999999986521    1 1      111223456688999999999887776 58999


Q ss_pred             EEEECCcc-c---c---------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          82 RIWDLSLC-F---I---------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        82 ~l~d~~~~-~---~---------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                      .+||+.++ +   .         .....++|+|+|++|++++.++    ...|.+|++.
T Consensus       236 ~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~----~~~i~v~~~~  290 (361)
T 3scy_A          236 IAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLK----ADGVAIFKVD  290 (361)
T ss_dssp             EEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSS----SCEEEEEEEC
T ss_pred             EEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCC----CCEEEEEEEc
Confidence            99999765 1   1         2356899999999988877641    2279999985

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.12  E-value=9.2e-10  Score=84.85  Aligned_cols=109  Identities=15%  Similarity=0.092  Sum_probs=81.5

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCC-----CCCCceEEecCCCCC--------------EEEEEEccCCCEEEEE
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGS-----NNPNPVINCEGVSKN--------------VVEVGFQEDGKWMFTG   75 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~-----~~~~~~~~~~~~~~~--------------i~~~~~sp~~~~l~~~   75 (148)
                      ..++|+|+  |+.|++ ..++.|.+||+.+     +  +.......+...              +.++.|+|||+.++++
T Consensus       124 ~~~~~Spd--G~~la~-~~~~~i~v~~~~~~~~~~g--~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~  198 (706)
T 2z3z_A          124 ASLDFSPV--GDRVAY-VRNHNLYIARGGKLGEGMS--RAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFY  198 (706)
T ss_dssp             TTCEECTT--SSEEEE-EETTEEEEEECBCTTSCCC--CCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEE
T ss_pred             cCCcCCCC--CCEEEE-EECCeEEEEecCcccccCC--CcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEE
Confidence            45678888  888888 6789999999998     6  444433333332              4789999999999988


Q ss_pred             e---------------------------------CCCcEEEEECCcc----cc------ccceEEEEccCCCEEEEEecC
Q psy7062          76 G---------------------------------EDCRARIWDLSLC----FI------QQVNALRITPDKQLLASAEEL  112 (148)
Q Consensus        76 ~---------------------------------~~~~i~l~d~~~~----~~------~~i~~~~~sp~~~~l~~~~~d  112 (148)
                      +                                 .+..+++||+.++    +.      ..+.+++|+|||+.|++++.+
T Consensus       199 ~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~  278 (706)
T 2z3z_A          199 RMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVN  278 (706)
T ss_dssp             EEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEEC
T ss_pred             EECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeC
Confidence            7                                 3467999999876    11      457899999999999887754


Q ss_pred             CceecCeeEEEeecCCC
Q psy7062         113 SCCYCGAAVFVYNSCYP  129 (148)
Q Consensus       113 ~~~~~~~~i~~~d~~~~  129 (148)
                      +.. ....|++||..+.
T Consensus       279 ~~~-~~~~v~~~d~~~g  294 (706)
T 2z3z_A          279 RAQ-NECKVNAYDAETG  294 (706)
T ss_dssp             TTS-CEEEEEEEETTTC
T ss_pred             CCC-CeeEEEEEECCCC
Confidence            411 2247999998876

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.10  E-value=1.2e-09  Score=76.86  Aligned_cols=107  Identities=14%  Similarity=0.148  Sum_probs=79.6

Q ss_pred             cEEEEEeCCCCccE-EEEEecCCeEEEEeCCCCCCCceEEecCC------CCCEEEEEEccCCCEEEEEeCC--------
Q psy7062          14 QISTVFDSKHLVEM-VAALGGYQHIRMYDFGSNNPNPVINCEGV------SKNVVEVGFQEDGKWMFTGGED--------   78 (148)
Q Consensus        14 ~~~~~~~~~~~~~~-l~~~~~d~~v~~~d~~~~~~~~~~~~~~~------~~~i~~~~~sp~~~~l~~~~~~--------   78 (148)
                      +..++|+++  ++. +++...++.|.+||++++  +.+..+...      ...+..++|+|+|+.+++++.+        
T Consensus        45 ~~~~~~s~d--g~~~~v~~~~~~~i~~~d~~t~--~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~  120 (349)
T 1jmx_B           45 PGTAMMAPD--NRTAYVLNNHYGDIYGIDLDTC--KNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHY  120 (349)
T ss_dssp             SCEEEECTT--SSEEEEEETTTTEEEEEETTTT--EEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCE
T ss_pred             CceeEECCC--CCEEEEEeCCCCcEEEEeCCCC--cEEEEEEcccccccccccccceEECCCCCEEEEEccccccccccc
Confidence            567888887  554 455456789999999987  666655532      2236788999999999888765        


Q ss_pred             ----CcEEEEECCcc--------cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCccee
Q psy7062          79 ----CRARIWDLSLC--------FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVV  133 (148)
Q Consensus        79 ----~~i~l~d~~~~--------~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~  133 (148)
                          +.+.+||+.++        +.  ..+.+++|+|+++ +++++.        .|.+||..+.+...
T Consensus       121 ~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~~~--------~i~~~d~~~~~~~~  180 (349)
T 1jmx_B          121 VVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVAGP--------DIYKMDVKTGKYTV  180 (349)
T ss_dssp             EECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEESS--------SEEEECTTTCCEEE
T ss_pred             ccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EEEccC--------cEEEEeCCCCceec
Confidence                89999999874        11  5578899999999 555433        59999988766544

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.09  E-value=1.9e-09  Score=86.77  Aligned_cols=104  Identities=16%  Similarity=0.172  Sum_probs=81.8

Q ss_pred             CccEEEEEecCCeEE-EEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc---ccc
Q psy7062          24 LVEMVAALGGYQHIR-MYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI---QQV   94 (148)
Q Consensus        24 ~~~~l~~~~~d~~v~-~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~---~~i   94 (148)
                      +++.++.++.+..+. +||+.++  + ...+..|...+..++|+|||+.+++++.++.+++||+.++     +.   ..+
T Consensus       347 dg~~l~~~s~~~~l~~~~d~~~~--~-~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v  423 (1045)
T 1k32_A          347 TKVAFIHGTREGDFLGIYDYRTG--K-AEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMI  423 (1045)
T ss_dssp             SEEEEEEEETTEEEEEEEETTTC--C-EEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCC
T ss_pred             CCCeEEEEECCCceEEEEECCCC--C-ceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCc
Confidence            478888878877888 8999876  3 3444477888999999999999999999999999999887     21   567


Q ss_pred             eEEEEccCCCEEEEEecCC--c--eecCeeEEEeecCCCc
Q psy7062          95 NALRITPDKQLLASAEELS--C--CYCGAAVFVYNSCYPA  130 (148)
Q Consensus        95 ~~~~~sp~~~~l~~~~~d~--~--~~~~~~i~~~d~~~~~  130 (148)
                      ..++|+|||++|+.++.++  .  ......|++||+.+.+
T Consensus       424 ~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~  463 (1045)
T 1k32_A          424 TDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK  463 (1045)
T ss_dssp             CCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred             cceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc
Confidence            8999999999998887532  0  0113489999988654

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.09  E-value=1.6e-09  Score=75.96  Aligned_cols=95  Identities=12%  Similarity=0.103  Sum_probs=71.1

Q ss_pred             cEEEEEecCCeEEEEeCCCC-CCCceEEecCCCCCEEEEEEccCCCEEEEEeCC-CcEEEEECC--cc-------cc--c
Q psy7062          26 EMVAALGGYQHIRMYDFGSN-NPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED-CRARIWDLS--LC-------FI--Q   92 (148)
Q Consensus        26 ~~l~~~~~d~~v~~~d~~~~-~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~-~~i~l~d~~--~~-------~~--~   92 (148)
                      .++++++.++.|.+||++.. ..+.+..+ .+...+..++|+|+++.+++++.+ +.+.+|++.  ++       +.  .
T Consensus         6 ~l~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~   84 (343)
T 1ri6_A            6 TVYIASPESQQIHVWNLNHEGALTLTQVV-DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG   84 (343)
T ss_dssp             EEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS
T ss_pred             EEEEeCCCCCeEEEEEECCCCcEEEeeeE-ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC
Confidence            34445467899999999632 11223333 367778899999999988888876 899999997  33       11  5


Q ss_pred             cceEEEEccCCCEEEEEec-CCceecCeeEEEeecC
Q psy7062          93 QVNALRITPDKQLLASAEE-LSCCYCGAAVFVYNSC  127 (148)
Q Consensus        93 ~i~~~~~sp~~~~l~~~~~-d~~~~~~~~i~~~d~~  127 (148)
                      .+..++|+|+++++++++. ++      .|.+||+.
T Consensus        85 ~~~~~~~s~dg~~l~~~~~~~~------~i~~~d~~  114 (343)
T 1ri6_A           85 SLTHISTDHQGQFVFVGSYNAG------NVSVTRLE  114 (343)
T ss_dssp             CCSEEEECTTSSEEEEEETTTT------EEEEEEEE
T ss_pred             CCcEEEEcCCCCEEEEEecCCC------eEEEEECC
Confidence            6889999999998877765 44      79999984

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.07  E-value=1.4e-09  Score=83.91  Aligned_cols=91  Identities=10%  Similarity=-0.026  Sum_probs=70.3

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCc----
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSL----   88 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~----   88 (148)
                      +...++|+|+  +.++++  .++.+.+||+.++  +. ..+..+...+..++|||||+.++.+ .++.|++||+.+    
T Consensus        83 ~v~~~~~spd--~~~~~~--~~~~i~~~d~~~~--~~-~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~  154 (706)
T 2z3z_A           83 PSFRTLDAGR--GLVVLF--TQGGLVGFDMLAR--KV-TYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEG  154 (706)
T ss_dssp             CCEEEEETTT--TEEEEE--ETTEEEEEETTTT--EE-EEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSC
T ss_pred             CceeEEECCC--CeEEEE--ECCEEEEEECCCC--ce-EEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCccccc
Confidence            4667888887  555554  4599999999887  43 3444466778889999999999885 679999999987    


Q ss_pred             -c----cc---cc---------------ceEEEEccCCCEEEEEec
Q psy7062          89 -C----FI---QQ---------------VNALRITPDKQLLASAEE  111 (148)
Q Consensus        89 -~----~~---~~---------------i~~~~~sp~~~~l~~~~~  111 (148)
                       +    +.   ..               +.++.|+|||++|++++.
T Consensus       155 ~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~  200 (706)
T 2z3z_A          155 MSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRM  200 (706)
T ss_dssp             CCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEE
T ss_pred             CCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEE
Confidence             5    11   22               488999999999999873

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.06  E-value=9.4e-10  Score=85.02  Aligned_cols=91  Identities=13%  Similarity=0.057  Sum_probs=70.3

Q ss_pred             cEEEEEeCCCCccEEEEEec---------CCeEEEEeCCCCCCCce--EEecCCCCCEEEEEEccCCCEEEEEeCCCcEE
Q psy7062          14 QISTVFDSKHLVEMVAALGG---------YQHIRMYDFGSNNPNPV--INCEGVSKNVVEVGFQEDGKWMFTGGEDCRAR   82 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~---------d~~v~~~d~~~~~~~~~--~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~   82 (148)
                      ...++|+|+  |+.|++++.         ++.+++||++++  +.+  ..+   ...+..++|||||+.++.+. ++.|+
T Consensus        62 ~~~~~~SpD--g~~la~~~~~~~~~~~s~~~~i~~~d~~~g--~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~  133 (719)
T 1z68_A           62 ASNYGLSPD--RQFVYLESDYSKLWRYSYTATYYIYDLSNG--EFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIY  133 (719)
T ss_dssp             CSEEEECTT--SSEEEEEEEEEECSSSCEEEEEEEEETTTT--EECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEE
T ss_pred             eeeEEECCC--CCeEEEEecCceeEEeecceEEEEEECCCC--ccccceec---CcccccceECCCCCEEEEEE-CCeEE
Confidence            457888888  888888766         689999999987  432  222   24578899999999998885 78999


Q ss_pred             EEECCcc----cc-----ccc-----------------eEEEEccCCCEEEEEecC
Q psy7062          83 IWDLSLC----FI-----QQV-----------------NALRITPDKQLLASAEEL  112 (148)
Q Consensus        83 l~d~~~~----~~-----~~i-----------------~~~~~sp~~~~l~~~~~d  112 (148)
                      +||+.++    +.     ..+                 .++.|||||+.|++++.|
T Consensus       134 ~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d  189 (719)
T 1z68_A          134 LKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFN  189 (719)
T ss_dssp             EESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEE
T ss_pred             EEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEEC
Confidence            9999765    21     111                 489999999999998765

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=98.99  E-value=1.6e-08  Score=73.58  Aligned_cols=103  Identities=13%  Similarity=0.031  Sum_probs=79.8

Q ss_pred             ecCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-
Q psy7062          11 AFGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-   89 (148)
Q Consensus        11 ~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-   89 (148)
                      +++...++|  +  +..|+++ .++.|++||+.+.  ........|...+..+.+.+.  .++.++.||.+.+||+... 
T Consensus        87 lp~V~~l~f--d--~~~L~v~-~~~~l~v~dv~sl--~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~  157 (388)
T 1xip_A           87 IPDVIFVCF--H--GDQVLVS-TRNALYSLDLEEL--SEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKS  157 (388)
T ss_dssp             CTTEEEEEE--E--TTEEEEE-ESSEEEEEESSST--TCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCC
T ss_pred             CCCeeEEEE--C--CCEEEEE-cCCcEEEEEchhh--hccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCc
Confidence            344566777  3  7888986 8899999999987  445555567777887776553  3888899999999999876 


Q ss_pred             ---ccccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 ---FIQQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 ---~~~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                         +...+.+++|||+|  ++.+..||      ++++|+.....
T Consensus       158 ~~~~~~~Vs~v~WSpkG--~~vg~~dg------~i~~~~~~~~~  193 (388)
T 1xip_A          158 TKQLAQNVTSFDVTNSQ--LAVLLKDR------SFQSFAWRNGE  193 (388)
T ss_dssp             EEEEEESEEEEEECSSE--EEEEETTS------CEEEEEEETTE
T ss_pred             cccccCCceEEEEcCCc--eEEEEcCC------cEEEEcCCCcc
Confidence               22789999999999  67788877      88888776444

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=98.98  E-value=4.5e-08  Score=67.46  Aligned_cols=106  Identities=11%  Similarity=0.201  Sum_probs=80.3

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCC--CCCEEEEEEccCCCEEEEEeCCC-cEEEEECCcc
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGV--SKNVVEVGFQEDGKWMFTGGEDC-RARIWDLSLC   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~--~~~i~~~~~sp~~~~l~~~~~~~-~i~l~d~~~~   89 (148)
                      .+..++++++  ++++++...++.|.+||...   +.+..+..+  ...+.+++++++|+++++...++ .|.+||....
T Consensus       165 ~p~~i~~~~~--g~l~v~~~~~~~i~~~~~~g---~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~  239 (286)
T 1q7f_A          165 FPNGVVVNDK--QEIFISDNRAHCVKVFNYEG---QYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQ  239 (286)
T ss_dssp             SEEEEEECSS--SEEEEEEGGGTEEEEEETTC---CEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSC
T ss_pred             CcEEEEECCC--CCEEEEECCCCEEEEEcCCC---CEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCC
Confidence            3567888887  77888866788999999854   456666433  36789999999999888887776 9999997544


Q ss_pred             ----cc-----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 ----FI-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 ----~~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                          +.     ..+..++++|+++.+++ +.++      +|++|++....
T Consensus       240 ~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~------~v~v~~~~~~~  282 (286)
T 1q7f_A          240 LISALESKVKHAQCFDVALMDDGSVVLA-SKDY------RLYIYRYVQLA  282 (286)
T ss_dssp             EEEEEEESSCCSCEEEEEEETTTEEEEE-ETTT------EEEEEECSCCC
T ss_pred             EEEEEcccCCCCcceeEEECCCCcEEEE-CCCC------eEEEEEccccc
Confidence                22     33678999999986666 5666      89999986543

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=98.95  E-value=1.6e-08  Score=77.38  Aligned_cols=108  Identities=10%  Similarity=0.067  Sum_probs=79.5

Q ss_pred             cEEEEEeCCCCccEEEEEecC----------CeEEEEeCCC------CCCCceEEec-CCCCCEEEEEEccCCCEEEEEe
Q psy7062          14 QISTVFDSKHLVEMVAALGGY----------QHIRMYDFGS------NNPNPVINCE-GVSKNVVEVGFQEDGKWMFTGG   76 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d----------~~v~~~d~~~------~~~~~~~~~~-~~~~~i~~~~~sp~~~~l~~~~   76 (148)
                      ...++|+|+  |+.|++++.+          ..|.+||+.+      +  + ...+. .+...+..++|||||+.++..+
T Consensus       132 ~~~~~~spD--g~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--~-~~~l~~~~~~~~~~~~~SpDG~~la~~~  206 (662)
T 3azo_A          132 WADPVLLPE--RGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRS--A-VRELSDDAHRFVTGPRLSPDGRQAVWLA  206 (662)
T ss_dssp             EEEEEEETT--TTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGG--G-SEESSCSCSSEECCCEECTTSSEEEEEE
T ss_pred             ccCcEECCC--CCEEEEEEecccCCCCCCceeEEEEEECCCCccccCC--c-eeEEEecCCCcccCceECCCCCEEEEEE
Confidence            356788888  7888876766          4899999987      5  3 34444 5566788899999999998877


Q ss_pred             CC--------CcEEEEECC-cc-------cc----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          77 ED--------CRARIWDLS-LC-------FI----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        77 ~~--------~~i~l~d~~-~~-------~~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                      .+        ..|++||+. ++       +.    ..+..+.|+|||+++++++.++    ...|..||....+
T Consensus       207 ~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~----~~~l~~~~~~~~~  276 (662)
T 3azo_A          207 WDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTG----WWNLHRVDPATGA  276 (662)
T ss_dssp             ECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTS----SCEEEEECTTTCC
T ss_pred             CCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCC----CeEEEEEECCCCc
Confidence            55        379999998 33       21    5678899999999777776655    3367788865443

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=98.92  E-value=7.2e-08  Score=68.99  Aligned_cols=112  Identities=9%  Similarity=-0.012  Sum_probs=76.8

Q ss_pred             cEEEEEeCCCCccEEEEEe-cCCeEEEEeCC-CCCCCceEEec--CCCCCEEEEEEccCCCEEEEEeC-CCcEEEEECC-
Q psy7062          14 QISTVFDSKHLVEMVAALG-GYQHIRMYDFG-SNNPNPVINCE--GVSKNVVEVGFQEDGKWMFTGGE-DCRARIWDLS-   87 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~-~d~~v~~~d~~-~~~~~~~~~~~--~~~~~i~~~~~sp~~~~l~~~~~-~~~i~l~d~~-   87 (148)
                      ...++|+|+  |++++++. .++.|.+||++ ++....+..+.  .|...+..++|+|+|+.+++++. ++.+.+|++. 
T Consensus       147 ~~~~~~spd--G~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~  224 (365)
T 1jof_A          147 IHGMVFDPT--ETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDP  224 (365)
T ss_dssp             EEEEEECTT--SSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred             ceEEEECCC--CCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeC
Confidence            567888888  77776644 35799999998 65212223333  24567899999999998877765 6899999764 


Q ss_pred             -cc-c----------c-c------------cceEEE-EccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          88 -LC-F----------I-Q------------QVNALR-ITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        88 -~~-~----------~-~------------~i~~~~-~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                       ++ +          . .            .+..++ |+|||++|++++.+........|.+|++.
T Consensus       225 ~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~  290 (365)
T 1jof_A          225 ATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLR  290 (365)
T ss_dssp             TTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEEC
T ss_pred             CCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEEC
Confidence             22 1          1 1            367899 99999998877653210011279999986

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=98.87  E-value=7.1e-08  Score=73.39  Aligned_cols=106  Identities=9%  Similarity=0.042  Sum_probs=83.1

Q ss_pred             CCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECC--cc-----cc--
Q psy7062          21 SKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLS--LC-----FI--   91 (148)
Q Consensus        21 ~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~--~~-----~~--   91 (148)
                      .+..+.++++...+++|.++|..++  +.+..+.. ...+..+.++|||+++++++.++.+.+||+.  +.     +.  
T Consensus       163 ~d~~~~~~V~~~~~~~V~viD~~t~--~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G  239 (567)
T 1qks_A          163 WDLENLFSVTLRDAGQIALIDGSTY--EIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG  239 (567)
T ss_dssp             CCGGGEEEEEETTTTEEEEEETTTC--CEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECC
T ss_pred             cCCCceEEEEeCCCCeEEEEECCCC--eEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecC
Confidence            3333567777677889999999998  77877763 4456689999999999999999999999995  44     22  


Q ss_pred             ccceEEEEc----cCCCEEEEEecCCceecCeeEEEeecCCCcceec
Q psy7062          92 QQVNALRIT----PDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVA  134 (148)
Q Consensus        92 ~~i~~~~~s----p~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~  134 (148)
                      .....++|+    |+|+++++++..     ..++.++|..+.+....
T Consensus       240 ~~P~~ia~s~~~~pDGk~l~v~n~~-----~~~v~ViD~~t~~~~~~  281 (567)
T 1qks_A          240 SEARSIETSKMEGWEDKYAIAGAYW-----PPQYVIMDGETLEPKKI  281 (567)
T ss_dssp             SEEEEEEECCSTTCTTTEEEEEEEE-----TTEEEEEETTTCCEEEE
T ss_pred             CCCceeEEccccCCCCCEEEEEEcc-----CCeEEEEECCCCcEEEE
Confidence            557889999    699999988763     33799999887765543

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=98.84  E-value=8.3e-08  Score=68.66  Aligned_cols=88  Identities=7%  Similarity=0.014  Sum_probs=64.8

Q ss_pred             cCCeEEEEeCCC-CCCCceEEec----CCCCCEEEEEEccCCCEEEEEeC-CCcEEEEECC-cc-c------c-----cc
Q psy7062          33 GYQHIRMYDFGS-NNPNPVINCE----GVSKNVVEVGFQEDGKWMFTGGE-DCRARIWDLS-LC-F------I-----QQ   93 (148)
Q Consensus        33 ~d~~v~~~d~~~-~~~~~~~~~~----~~~~~i~~~~~sp~~~~l~~~~~-~~~i~l~d~~-~~-~------~-----~~   93 (148)
                      .++++.+|+++. +  +....+.    .+...+.+++|+|||+++++++. ++.|++||+. ++ +      .     ..
T Consensus       117 ~~g~v~v~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~  194 (365)
T 1jof_A          117 FAGYGNVFSVSETG--KLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDH  194 (365)
T ss_dssp             SCCEEEEEEECTTC--CEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCC
T ss_pred             CCceEEEEccCCCC--cCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCC
Confidence            588999999974 4  3333332    24567899999999998887664 6799999997 44 1      1     24


Q ss_pred             ceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          94 VNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        94 i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                      +..++|+|+|+++++++...     ..|.+|++.
T Consensus       195 p~~~~~spdg~~l~v~~~~~-----~~v~v~~~~  223 (365)
T 1jof_A          195 PRWVAMHPTGNYLYALMEAG-----NRICEYVID  223 (365)
T ss_dssp             EEEEEECTTSSEEEEEETTT-----TEEEEEEEC
T ss_pred             CCEeEECCCCCEEEEEECCC-----CeEEEEEEe
Confidence            78899999999988877522     278888764

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=98.84  E-value=6.4e-08  Score=75.05  Aligned_cols=108  Identities=11%  Similarity=0.033  Sum_probs=77.0

Q ss_pred             EEEEEeCCCCccEEEEEecCC-----eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCc---------
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQ-----HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCR---------   80 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~-----~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~---------   80 (148)
                      ..++|+|+  |++|+.+..++     .|++||+.++  +.+.... ....+..++|+|||+.++.++.++.         
T Consensus       128 ~~~~~SPD--g~~la~~~~~~G~~~~~i~v~d~~tg--~~~~~~~-~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~  202 (710)
T 2xdw_A          128 RGYAFSED--GEYFAYGLSASGSDWVTIKFMKVDGA--KELPDVL-ERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTET  202 (710)
T ss_dssp             EEEEECTT--SSEEEEEEEETTCSCEEEEEEETTTT--EEEEEEE-EEECSCCEEECTTSSEEEEEECCCCSSCCSSSCC
T ss_pred             EEEEECCC--CCEEEEEEcCCCCceEEEEEEECCCC--CCCcccc-cCcccceEEEEeCCCEEEEEEECCcccccccccc
Confidence            46778887  78887755543     8999999988  5544222 1223567899999999988887655         


Q ss_pred             -------EEEEECCcc-------cc-----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062          81 -------ARIWDLSLC-------FI-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        81 -------i~l~d~~~~-------~~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                             |++|++.+.       +.     .....+.|+|||++|+.++..+.- ....|++||+.+
T Consensus       203 ~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~-~~~~l~~~d~~~  268 (710)
T 2xdw_A          203 STNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCD-PVNRLWYCDLQQ  268 (710)
T ss_dssp             CCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSS-SCCEEEEEEGGG
T ss_pred             ccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCC-CccEEEEEECcc
Confidence                   999999765       12     235688999999998887753310 034799999875

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=98.82  E-value=2.7e-08  Score=77.47  Aligned_cols=91  Identities=15%  Similarity=0.119  Sum_probs=70.1

Q ss_pred             EEEeCCCCccEEEEEecC---------CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECC
Q psy7062          17 TVFDSKHLVEMVAALGGY---------QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLS   87 (148)
Q Consensus        17 ~~~~~~~~~~~l~~~~~d---------~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~   87 (148)
                      ++|+|+  |+.|+.++.+         +.+.+||+.++  + ...+..+...+...+|||||+.++.+. ++.|++||+.
T Consensus        67 ~~~Spd--g~~l~~~~~~~~~~r~~~~~~~~~~d~~~~--~-~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~  140 (740)
T 4a5s_A           67 YSISPD--GQFILLEYNYVKQWRHSYTASYDIYDLNKR--Q-LITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEP  140 (740)
T ss_dssp             EEECTT--SSEEEEEEEEEECSSSCEEEEEEEEETTTT--E-ECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESST
T ss_pred             eEECCC--CCEEEEEECCeeeEEEccceEEEEEECCCC--c-EEEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECC
Confidence            677887  8888887765         45679999987  4 445666778899999999999998884 6899999997


Q ss_pred             cc----cc-----ccc-----------------eEEEEccCCCEEEEEecCC
Q psy7062          88 LC----FI-----QQV-----------------NALRITPDKQLLASAEELS  113 (148)
Q Consensus        88 ~~----~~-----~~i-----------------~~~~~sp~~~~l~~~~~d~  113 (148)
                      ++    +.     ..+                 ..+.|||||+.|+.++.|.
T Consensus       141 ~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~  192 (740)
T 4a5s_A          141 NLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFND  192 (740)
T ss_dssp             TSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEEC
T ss_pred             CCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcc
Confidence            75    21     111                 3488999999999886543

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=98.78  E-value=1.7e-07  Score=67.28  Aligned_cols=94  Identities=14%  Similarity=0.168  Sum_probs=72.2

Q ss_pred             cCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeC----------CCcEEEEECCcc-----cc------
Q psy7062          33 GYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE----------DCRARIWDLSLC-----FI------   91 (148)
Q Consensus        33 ~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~----------~~~i~l~d~~~~-----~~------   91 (148)
                      .|+.+.+||..++  +.+..+..+.. . .++++|||+.+++++.          ++.+.+||..+.     +.      
T Consensus        29 ~d~~v~v~D~~t~--~~~~~i~~g~~-p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~  104 (361)
T 2oiz_A           29 TESRVHVYDYTNG--KFLGMVPTAFN-G-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRV  104 (361)
T ss_dssp             GGCEEEEEETTTC--CEEEEEECCEE-E-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBC
T ss_pred             ccCeEEEEECCCC--eEEEEecCCCC-C-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcccc
Confidence            3679999999988  77777765443 3 8999999999988763          567999999876     11      


Q ss_pred             ---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceec
Q psy7062          92 ---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVA  134 (148)
Q Consensus        92 ---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~  134 (148)
                         .....++++|+|++|++++...    ...|.+||+.+.+....
T Consensus       105 ~~g~~p~~i~~spdg~~l~v~n~~~----~~~v~v~d~~~~~~~~~  146 (361)
T 2oiz_A          105 QGLNYDGLFRQTTDGKFIVLQNASP----ATSIGIVDVAKGDYVED  146 (361)
T ss_dssp             CBCCCGGGEEECTTSSEEEEEEESS----SEEEEEEETTTTEEEEE
T ss_pred             ccCCCcceEEECCCCCEEEEECCCC----CCeEEEEECCCCcEEEE
Confidence               2467899999999999987532    34899999987765544

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=98.76  E-value=1e-06  Score=61.83  Aligned_cols=111  Identities=7%  Similarity=-0.098  Sum_probs=79.2

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC----CcEEEEECCcc
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED----CRARIWDLSLC   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~----~~i~l~d~~~~   89 (148)
                      ...++|+++  +++++++..++.|.+||.+++  +.......+...+.+++++|+|+.+++...+    +.|.+||....
T Consensus        47 ~~~~~~~~~--g~l~~~~~~~~~i~~~d~~~~--~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~  122 (333)
T 2dg1_A           47 LEGLNFDRQ--GQLFLLDVFEGNIFKINPETK--EIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGD  122 (333)
T ss_dssp             EEEEEECTT--SCEEEEETTTCEEEEECTTTC--CEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSC
T ss_pred             ccCcEECCC--CCEEEEECCCCEEEEEeCCCC--cEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCC
Confidence            467888876  778888778889999999887  4443333466789999999999988777666    68999998766


Q ss_pred             -c----c-----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062          90 -F----I-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        90 -~----~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                       +    .     ..+..+.++|+++.+++...+........|..+|...
T Consensus       123 ~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~  171 (333)
T 2dg1_A          123 NLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDF  171 (333)
T ss_dssp             SCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTS
T ss_pred             EEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCC
Confidence             1    1     4578899999998877665321001123566666543

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=98.74  E-value=8.1e-08  Score=74.33  Aligned_cols=106  Identities=12%  Similarity=-0.020  Sum_probs=73.2

Q ss_pred             EEEEEeCCCCccEEEE-----EecCCeEEEEeCCCCCCCce-E-EecCCCCCEEEEEEccCCCEEEEEeCCCc-------
Q psy7062          15 ISTVFDSKHLVEMVAA-----LGGYQHIRMYDFGSNNPNPV-I-NCEGVSKNVVEVGFQEDGKWMFTGGEDCR-------   80 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~-----~~~d~~v~~~d~~~~~~~~~-~-~~~~~~~~i~~~~~sp~~~~l~~~~~~~~-------   80 (148)
                      ..++|+|+  |++|+.     |+++.+|++||+.++  +.+ . .+..  .....++|+|||+.++.++.+..       
T Consensus       124 ~~~~~SPD--G~~la~~~~~~G~~~~~i~v~dl~tg--~~~~~~~~~~--~~~~~~~wspDg~~l~~~~~d~~~~~~~~~  197 (695)
T 2bkl_A          124 GTWAVSWD--GKKVAFAQKPNAADEAVLHVIDVDSG--EWSKVDVIEG--GKYATPKWTPDSKGFYYEWLPTDPSIKVDE  197 (695)
T ss_dssp             EEEEECTT--SSEEEEEEEETTCSCCEEEEEETTTC--CBCSSCCBSC--CTTCCCEECTTSSEEEEEECCCCTTSCGGG
T ss_pred             EEEEECCC--CCEEEEEECCCCCceEEEEEEECCCC--CCcCCcccCc--ccccceEEecCCCEEEEEEecCCCCCcccc
Confidence            46677877  788873     333458999999998  443 1 1111  11257899999999999888765       


Q ss_pred             ------EEEEECCcc-------cc-----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062          81 ------ARIWDLSLC-------FI-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        81 ------i~l~d~~~~-------~~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                            |++|++.+.       +.     ..+..+.|+|||++|+.++.++.  ....|++||...
T Consensus       198 ~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~--~~~~l~~~~~~~  261 (695)
T 2bkl_A          198 RPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGW--SENDVYWKRPGE  261 (695)
T ss_dssp             GGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETT--TEEEEEEECTTC
T ss_pred             CCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCC--CceEEEEEcCCC
Confidence                  999999865       22     35678899999998887765331  133577776543

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=98.74  E-value=1.8e-07  Score=66.12  Aligned_cols=106  Identities=11%  Similarity=0.127  Sum_probs=78.2

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEec--CCCCCEEEEEEccCCCEEEEE-------eCCCcEEE
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCE--GVSKNVVEVGFQEDGKWMFTG-------GEDCRARI   83 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~--~~~~~i~~~~~sp~~~~l~~~-------~~~~~i~l   83 (148)
                      .+..++++++. +.++++...++.|++||.+++  +.+..+.  .+...+..++++| +..+...       ..+..+++
T Consensus       197 ~p~gia~d~~~-g~l~v~d~~~~~I~~~~~~~G--~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~  272 (329)
T 3fvz_A          197 VPHSLALVPHL-DQLCVADRENGRIQCFKTDTK--EFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFV  272 (329)
T ss_dssp             CEEEEEEETTT-TEEEEEETTTTEEEEEETTTC--CEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEE
T ss_pred             CCcEEEEECCC-CEEEEEECCCCEEEEEECCCC--cEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEE
Confidence            36788888863 667777677889999999977  6777763  3567788999999 4333333       33458999


Q ss_pred             EECCcc-----cc------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062          84 WDLSLC-----FI------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        84 ~d~~~~-----~~------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                      ||..++     +.      ..+..++++|+|..+++...++      +|++|++..
T Consensus       273 ~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~------~I~~~~~~~  322 (329)
T 3fvz_A          273 MNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTN------TVWKFTLTE  322 (329)
T ss_dssp             EETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSC------CEEEEEEEE
T ss_pred             EEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCC------EEEEEeCCc
Confidence            998877     21      5578999999997666666655      899999763

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=98.72  E-value=5.9e-07  Score=61.08  Aligned_cols=109  Identities=11%  Similarity=-0.005  Sum_probs=81.8

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---   89 (148)
                      .+..++++++  ++++++...++.|.+||....  ........+...+.+++++++|..+++...++.|..||....   
T Consensus       151 ~p~~i~~~~~--g~l~v~~~~~~~i~~~~~~~~--~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~  226 (270)
T 1rwi_B          151 DPDGVAVDNS--GNVYVTDTDNNRVVKLEAESN--NQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTST  226 (270)
T ss_dssp             SCCCEEECTT--CCEEEEEGGGTEEEEECTTTC--CEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCE
T ss_pred             CceeEEEeCC--CCEEEEECCCCEEEEEecCCC--ceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcce
Confidence            3567888886  677777566789999999876  333332233467899999999987777777889999998765   


Q ss_pred             -cc----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          90 -FI----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        90 -~~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                       +.    ..+..++++|+++.+++...++      +|++++...++.
T Consensus       227 ~~~~~~~~~p~~i~~~~~g~l~v~~~~~~------~v~~~~~~~~~~  267 (270)
T 1rwi_B          227 VLPFTGLNTPLAVAVDSDRTVYVADRGND------RVVKLTSLEHHH  267 (270)
T ss_dssp             ECCCCSCSCEEEEEECTTCCEEEEEGGGT------EEEEECCCGGGS
T ss_pred             eeccCCCCCceeEEECCCCCEEEEECCCC------EEEEEcCCCccc
Confidence             11    4578999999999777777766      899999875543

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=98.71  E-value=1.4e-06  Score=61.53  Aligned_cols=111  Identities=14%  Similarity=0.101  Sum_probs=80.6

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEe---------cCCCCCEEEEEEcc-CCCEEEEEe-CCCcE
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINC---------EGVSKNVVEVGFQE-DGKWMFTGG-EDCRA   81 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~---------~~~~~~i~~~~~sp-~~~~l~~~~-~~~~i   81 (148)
                      .+..++++++  ++++++...++.|++||.+.. ...+..+         ..+-....+++++| ++.++++.+ .++.|
T Consensus        92 ~p~gia~d~~--g~l~v~d~~~~~v~~~~~~g~-~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I  168 (329)
T 3fvz_A           92 LPHGLSIDTD--GNYWVTDVALHQVFKLDPHSK-EGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRI  168 (329)
T ss_dssp             SEEEEEECTT--SCEEEEETTTTEEEEECTTCS-SCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEE
T ss_pred             CceEEEECCC--CCEEEEECCCCEEEEEeCCCC-eEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeE
Confidence            4667888887  778888777889999998654 1145554         23445789999999 788888886 68999


Q ss_pred             EEEECCcc----cc-------------ccceEEEEccC-CCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062          82 RIWDLSLC----FI-------------QQVNALRITPD-KQLLASAEELSCCYCGAAVFVYNSCYPAAV  132 (148)
Q Consensus        82 ~l~d~~~~----~~-------------~~i~~~~~sp~-~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~  132 (148)
                      ++||....    +.             ..+..++++|+ ++.+++...++      +|++||..+.+..
T Consensus       169 ~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~------~I~~~~~~~G~~~  231 (329)
T 3fvz_A          169 VQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENG------RIQCFKTDTKEFV  231 (329)
T ss_dssp             EEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTT------EEEEEETTTCCEE
T ss_pred             EEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCC------EEEEEECCCCcEE
Confidence            99995433    21             22788999998 66655555544      8999998754443

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=98.66  E-value=1.8e-06  Score=59.38  Aligned_cols=105  Identities=7%  Similarity=0.060  Sum_probs=78.6

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEec--CCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCE--GVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~--~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-   89 (148)
                      .+..++++++  ++++++...++.|.+||...   +.+..+.  .+...+.+++++|+|+.+++...++.|++||.... 
T Consensus       122 ~~~~i~~~~~--g~l~v~~~~~~~i~~~~~~g---~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~  196 (286)
T 1q7f_A          122 HPRGVTVDNK--GRIIVVECKVMRVIIFDQNG---NVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQY  196 (286)
T ss_dssp             CEEEEEECTT--SCEEEEETTTTEEEEECTTS---CEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCE
T ss_pred             CceEEEEeCC--CCEEEEECCCCEEEEEcCCC---CEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCCE
Confidence            3567888887  77888766778999999754   4555553  34567899999999998888888899999998654 


Q ss_pred             ---cc-----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          90 ---FI-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        90 ---~~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                         +.     ..+..++++|+++.+++...++     ..|.+||..
T Consensus       197 ~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~-----~~i~~~~~~  237 (286)
T 1q7f_A          197 LRQIGGEGITNYPIGVGINSNGEILIADNHNN-----FNLTIFTQD  237 (286)
T ss_dssp             EEEESCTTTSCSEEEEEECTTCCEEEEECSSS-----CEEEEECTT
T ss_pred             EEEEccCCccCCCcEEEECCCCCEEEEeCCCC-----EEEEEECCC
Confidence               21     3578899999998777765531     169999854

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.64  E-value=6.9e-07  Score=63.76  Aligned_cols=108  Identities=9%  Similarity=0.017  Sum_probs=69.8

Q ss_pred             EEEEEeCCCCccEEEEEecC-----CeEEEEeCCCCCCCceEEecCCCCCEEEEEEcc-CCCEEEEEe------------
Q psy7062          15 ISTVFDSKHLVEMVAALGGY-----QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQE-DGKWMFTGG------------   76 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d-----~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~------------   76 (148)
                      ..++|+|+  ++.|+..+.+     +.+.+||+.++  +...... .. ... +.|+| +|+.++.++            
T Consensus       241 ~~~~~spd--g~~l~~~~~~~~~~~~~l~~~d~~~g--~~~~l~~-~~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~  313 (396)
T 3c5m_A          241 THEFWIPD--GSAMAYVSYFKGQTDRVIYKANPETL--ENEEVMV-MP-PCS-HLMSNFDGSLMVGDGCDAPVDVADADS  313 (396)
T ss_dssp             EEEEECTT--SSCEEEEEEETTTCCEEEEEECTTTC--CEEEEEE-CC-SEE-EEEECSSSSEEEEEECCC---------
T ss_pred             cceEECCC--CCEEEEEecCCCCccceEEEEECCCC--CeEEeee-CC-CCC-CCccCCCCceEEEecCCcceeeccccc
Confidence            34678887  6766554544     44999999887  3322221 12 233 88999 999887654            


Q ss_pred             ----CCCcEEEEECCcc----cc---c-----------cceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062          77 ----EDCRARIWDLSLC----FI---Q-----------QVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV  132 (148)
Q Consensus        77 ----~~~~i~l~d~~~~----~~---~-----------~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~  132 (148)
                          .+..+++||+.++    +.   .           ......|+|+++.|+.++.+.   ....|+.+|+......
T Consensus       314 ~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~---~~~~l~~~~~~~~~~~  388 (396)
T 3c5m_A          314 YNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFE---GVPAIYIADVPESYKH  388 (396)
T ss_dssp             -CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTT---SSCEEEEEECCTTCC-
T ss_pred             cccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCC---CCceEEEEEEcccccc
Confidence                2468999999876    22   2           156689999999888777533   2345677776655443

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=98.61  E-value=6.8e-07  Score=63.82  Aligned_cols=110  Identities=13%  Similarity=-0.007  Sum_probs=74.9

Q ss_pred             EEEeCCCCccEEEEEec-CC--eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          17 TVFDSKHLVEMVAALGG-YQ--HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        17 ~~~~~~~~~~~l~~~~~-d~--~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      .+|+|+  |+.|+..+. ++  .+.+||++++  +.......+...+....|+|||+.++.++.++.+++||+.++    
T Consensus        41 ~~~SpD--g~~l~~~~~~~g~~~l~~~d~~~g--~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~  116 (388)
T 3pe7_A           41 KCFTRD--GSKLLFGGAFDGPWNYYLLDLNTQ--VATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENV  116 (388)
T ss_dssp             CCBCTT--SCEEEEEECTTSSCEEEEEETTTC--EEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEE
T ss_pred             ccCCCC--CCEEEEEEcCCCCceEEEEeCCCC--ceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCccee
Confidence            457777  787777676 55  4888899887  555444445555556789999999999999999999999887    


Q ss_pred             -cc---ccceEE--EEccCCCEEEEEecCCc----------------eecCeeEEEeecCCCc
Q psy7062          90 -FI---QQVNAL--RITPDKQLLASAEELSC----------------CYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 -~~---~~i~~~--~~sp~~~~l~~~~~d~~----------------~~~~~~i~~~d~~~~~  130 (148)
                       +.   ..+...  .++|+++.++....++.                ......|.+||+.+.+
T Consensus       117 ~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~  179 (388)
T 3pe7_A          117 VYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE  179 (388)
T ss_dssp             EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC
T ss_pred             eeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCc
Confidence             11   222223  34889998875431110                0123579999988654

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=98.60  E-value=3.2e-06  Score=64.37  Aligned_cols=71  Identities=11%  Similarity=0.065  Sum_probs=56.2

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCC--CCCCCceEEecCCCCCEEEEEEc----cCCCEEEEEeC-CCcEEEEEC
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFG--SNNPNPVINCEGVSKNVVEVGFQ----EDGKWMFTGGE-DCRARIWDL   86 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~--~~~~~~~~~~~~~~~~i~~~~~s----p~~~~l~~~~~-~~~i~l~d~   86 (148)
                      +..++++++  ++++++++.++.|.+||+.  +.  +.+..+.. ......++++    |||+++++++. ++.+.++|.
T Consensus       199 p~~v~~SpD--Gr~lyv~~~dg~V~viD~~~~t~--~~v~~i~~-G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~  273 (567)
T 1qks_A          199 VHISRLSAS--GRYLFVIGRDGKVNMIDLWMKEP--TTVAEIKI-GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDG  273 (567)
T ss_dssp             EEEEEECTT--SCEEEEEETTSEEEEEETTSSSC--CEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEET
T ss_pred             ccceEECCC--CCEEEEEcCCCeEEEEECCCCCC--cEeEEEec-CCCCceeEEccccCCCCCEEEEEEccCCeEEEEEC
Confidence            457888888  8888888999999999996  55  66777764 4457799999    69998877665 588999997


Q ss_pred             Ccc
Q psy7062          87 SLC   89 (148)
Q Consensus        87 ~~~   89 (148)
                      .+.
T Consensus       274 ~t~  276 (567)
T 1qks_A          274 ETL  276 (567)
T ss_dssp             TTC
T ss_pred             CCC
Confidence            654

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=98.60  E-value=2.8e-06  Score=58.76  Aligned_cols=90  Identities=10%  Similarity=-0.033  Sum_probs=72.4

Q ss_pred             CcEEEEEeCCCCcc-EEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--
Q psy7062          13 GQISTVFDSKHLVE-MVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~-~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--   89 (148)
                      ....++|+++  ++ +++++..++.|..||.+++    ...+..+...+.+++++|+|+++++...++.|.+||..++  
T Consensus        29 ~~eg~~~d~~--g~~l~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~  102 (296)
T 3e5z_A           29 WTEGPVYVPA--RSAVIFSDVRQNRTWAWSDDGQ----LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEW  102 (296)
T ss_dssp             SEEEEEEEGG--GTEEEEEEGGGTEEEEEETTSC----EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCE
T ss_pred             cccCCeEeCC--CCEEEEEeCCCCEEEEEECCCC----eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcE
Confidence            3678999998  66 7778788899999999864    4555556778999999999998877777789999999665  


Q ss_pred             --cc--------ccceEEEEccCCCEEEE
Q psy7062          90 --FI--------QQVNALRITPDKQLLAS  108 (148)
Q Consensus        90 --~~--------~~i~~~~~sp~~~~l~~  108 (148)
                        +.        ..+..++++|+|+.+++
T Consensus       103 ~~~~~~~~~~~~~~~~~i~~d~~G~l~vt  131 (296)
T 3e5z_A          103 ESIADSFEGKKLNSPNDVCLAPDGSLWFS  131 (296)
T ss_dssp             EEEECEETTEECCCCCCEEECTTSCEEEE
T ss_pred             EEEeeccCCCCCCCCCCEEECCCCCEEEE
Confidence              11        34678999999998887

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=98.57  E-value=7.4e-07  Score=68.19  Aligned_cols=107  Identities=7%  Similarity=-0.151  Sum_probs=74.3

Q ss_pred             EEEEe--CCCCccE-EEEEec-CCeEEEEeCC--C-CCCCceEEecC-----CCCCEEEEEEccCCCEEEEEeCC-----
Q psy7062          16 STVFD--SKHLVEM-VAALGG-YQHIRMYDFG--S-NNPNPVINCEG-----VSKNVVEVGFQEDGKWMFTGGED-----   78 (148)
Q Consensus        16 ~~~~~--~~~~~~~-l~~~~~-d~~v~~~d~~--~-~~~~~~~~~~~-----~~~~i~~~~~sp~~~~l~~~~~~-----   78 (148)
                      .+.|.  |+  ++. |+..+. +..|.++++.  . +  + ...+..     |...+..++|+|||+.++.++.+     
T Consensus        81 ~~~~~~SPD--g~~~la~~~~~~~~l~~~~~~~~g~~--~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~  155 (662)
T 3azo_A           81 PWAGVPRPA--GGPLLVFTHFGDQRLYAFEPDAPGGA--V-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEG  155 (662)
T ss_dssp             CEEEECCSS--SSCEEEEEBTTTCCEEEECTTSTTCC--C-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSS
T ss_pred             cceeeeecC--CCeEEEEEECCCCeEEEEcCCCCCCC--C-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCC
Confidence            34455  55  666 665333 4467677766  3 4  2 334444     56678899999999999888776     


Q ss_pred             -----CcEEEEECCc------c-----c-c--ccceEEEEccCCCEEEEEecCCce--ecCeeEEEeecC
Q psy7062          79 -----CRARIWDLSL------C-----F-I--QQVNALRITPDKQLLASAEELSCC--YCGAAVFVYNSC  127 (148)
Q Consensus        79 -----~~i~l~d~~~------~-----~-~--~~i~~~~~sp~~~~l~~~~~d~~~--~~~~~i~~~d~~  127 (148)
                           ..|++||+..      +     . .  ..+..++|||||++|+.++.+...  .....|++||+.
T Consensus       156 ~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~  225 (662)
T 3azo_A          156 PSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVT  225 (662)
T ss_dssp             TTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEEC
T ss_pred             CCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEEC
Confidence                 5899999987      5     3 2  456778999999999888754311  123579999998

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=98.57  E-value=9.4e-07  Score=63.39  Aligned_cols=81  Identities=11%  Similarity=0.103  Sum_probs=63.2

Q ss_pred             EEEeCCCCccEEEEEec-----------CCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEE
Q psy7062          17 TVFDSKHLVEMVAALGG-----------YQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWD   85 (148)
Q Consensus        17 ~~~~~~~~~~~l~~~~~-----------d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d   85 (148)
                      ++|+++  +..++++..           ..+|.+||+++.  +.+..+..+.  +.+++|+|||+++++++. +.+.+||
T Consensus       259 ~a~~~d--g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~--~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D  331 (361)
T 2oiz_A          259 VGLHRA--SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTK--QRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYD  331 (361)
T ss_dssp             EEEETT--TTEEEEEEESSCCTTCTTCCCSEEEEEETTTT--EEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEE
T ss_pred             EEEecC--CCeEEEEEccCCCcccccCCCceEEEEECCCC--cEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEE
Confidence            677887  444444333           348999999998  8888888766  889999999999988876 9999999


Q ss_pred             CCcc-------c-c--ccceEEEEccCCC
Q psy7062          86 LSLC-------F-I--QQVNALRITPDKQ  104 (148)
Q Consensus        86 ~~~~-------~-~--~~i~~~~~sp~~~  104 (148)
                      ..++       + .  ...+.+.++|+|+
T Consensus       332 ~~t~~l~~~~~i~~~G~~P~~~~~~p~G~  360 (361)
T 2oiz_A          332 ISQPEPKLLRTIEGAAEASLQVQFHPVGG  360 (361)
T ss_dssp             CSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred             CCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence            9876       1 1  4567888888875

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=98.56  E-value=2.7e-06  Score=60.70  Aligned_cols=110  Identities=13%  Similarity=0.026  Sum_probs=76.9

Q ss_pred             EEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEE--EccCCCEEEEE------------------
Q psy7062          16 STVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVG--FQEDGKWMFTG------------------   75 (148)
Q Consensus        16 ~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~--~sp~~~~l~~~------------------   75 (148)
                      ..+|+|+  ++.|+.++.++.+.+||+.++  +.......+...+....  ++|+++.++..                  
T Consensus        85 ~~~~spd--g~~l~~~~~~~~l~~~d~~~g--~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~  160 (388)
T 3pe7_A           85 GGFLSPD--DDALFYVKDGRNLMRVDLATL--EENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHE  160 (388)
T ss_dssp             SCEECTT--SSEEEEEETTTEEEEEETTTC--CEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHH
T ss_pred             ceEEcCC--CCEEEEEeCCCeEEEEECCCC--cceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhh
Confidence            4578888  888888788889999999988  55545554555443333  48999988642                  


Q ss_pred             ----eCCCcEEEEECCcc----cc---ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          76 ----GEDCRARIWDLSLC----FI---QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        76 ----~~~~~i~l~d~~~~----~~---~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                          ..+..|.+||+.++    +.   ..+..+.|+| +++.|+....++.-.....|.++|....
T Consensus       161 ~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~  226 (388)
T 3pe7_A          161 FYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGT  226 (388)
T ss_dssp             HGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSC
T ss_pred             hhccCCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCC
Confidence                23467999999877    22   5678899999 9998888775321111336888886543

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=98.54  E-value=2e-06  Score=60.53  Aligned_cols=71  Identities=15%  Similarity=0.104  Sum_probs=53.1

Q ss_pred             CCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC---C--cEEEEECCcc----cc--ccceEEEEccC
Q psy7062          34 YQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED---C--RARIWDLSLC----FI--QQVNALRITPD  102 (148)
Q Consensus        34 d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~---~--~i~l~d~~~~----~~--~~i~~~~~sp~  102 (148)
                      ++.+.+||++++  +. ..+    ..+..+.|+|||+.++..+.+   +  .|++||+..+    +.  ..+..+.|+|+
T Consensus        42 ~~~l~~~d~~~~--~~-~~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~wspd  114 (347)
T 2gop_A           42 ENTIVIENLKNN--AR-RFI----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKNIRSLEWNED  114 (347)
T ss_dssp             EEEEEEEETTTC--CE-EEE----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESEEEEEEECTT
T ss_pred             cceEEEEeCCCC--ce-EEc----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCCccceeECCC
Confidence            457999999887  43 333    457789999999988877653   3  4788888766    22  22888999999


Q ss_pred             CCEEEEEec
Q psy7062         103 KQLLASAEE  111 (148)
Q Consensus       103 ~~~l~~~~~  111 (148)
                      ++.|+.++.
T Consensus       115 g~~l~~~~~  123 (347)
T 2gop_A          115 SRKLLIVGF  123 (347)
T ss_dssp             SSEEEEEEE
T ss_pred             CCEEEEEEc
Confidence            998888874

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=98.53  E-value=4e-06  Score=58.99  Aligned_cols=106  Identities=10%  Similarity=0.093  Sum_probs=70.9

Q ss_pred             CcEEEEEeCCCCccEEEEEecC---C--eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC---------
Q psy7062          13 GQISTVFDSKHLVEMVAALGGY---Q--HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED---------   78 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d---~--~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~---------   78 (148)
                      ....++|+|+  |+.|+..+.+   +  .+.+||+.++  +...... +.. +..+.|+|||+.++..+.+         
T Consensus        60 ~~~~~~~SpD--g~~la~~~~~~~~~~~~l~~~~~~~g--~~~~l~~-~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~  133 (347)
T 2gop_A           60 NATMPRISPD--GKKIAFMRANEEKKVSEIWVADLETL--SSKKILE-AKN-IRSLEWNEDSRKLLIVGFKRREDEDFIF  133 (347)
T ss_dssp             SCEEEEECTT--SSEEEEEEEETTTTEEEEEEEETTTT--EEEEEEE-ESE-EEEEEECTTSSEEEEEEECCCC------
T ss_pred             cCCCeEECCC--CCEEEEEEeccCCCcceEEEEECCCC--ceEEEEc-CCC-ccceeECCCCCEEEEEEccCCCcCCcEE
Confidence            3456788888  7777775643   3  4777888876  4433333 334 8999999999988777632         


Q ss_pred             ------------------CcEEEEECCcc-c-c----ccceEEEEccCCCEEEEEecCCcee--c-CeeEEEee
Q psy7062          79 ------------------CRARIWDLSLC-F-I----QQVNALRITPDKQLLASAEELSCCY--C-GAAVFVYN  125 (148)
Q Consensus        79 ------------------~~i~l~d~~~~-~-~----~~i~~~~~sp~~~~l~~~~~d~~~~--~-~~~i~~~d  125 (148)
                                        ..+++||+.++ . .    ..+..+.|+|+| .++++..++...  . ...|.++|
T Consensus       134 ~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d  206 (347)
T 2gop_A          134 EDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKPRFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE  206 (347)
T ss_dssp             ---CCCC---------CEEEEEEEETTTTEEEEEEEEETTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE
T ss_pred             EcccceeecCcccccCccceEEEEECCCCeEEeeecCCCcccccCCCCe-EEEEEecccccccccccccEEEeC
Confidence                              56889999776 3 2    257788999999 777776543111  1 23566666

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=98.51  E-value=1.8e-06  Score=62.67  Aligned_cols=103  Identities=14%  Similarity=-0.025  Sum_probs=76.1

Q ss_pred             ccEEEEEec-----CCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEe----------CCCcEEEEECCcc
Q psy7062          25 VEMVAALGG-----YQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGG----------EDCRARIWDLSLC   89 (148)
Q Consensus        25 ~~~l~~~~~-----d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~----------~~~~i~l~d~~~~   89 (148)
                      +..+++...     ++.|.+.|..+.  +.+.++..-...  .+.++|||+.++.++          .++.+.+||..+.
T Consensus        44 ~~~vyV~~~~~~~~~~~V~ViD~~t~--~v~~~I~vG~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~  119 (386)
T 3sjl_D           44 ARRVYVNDPAHFAAVTQQFVIDGEAG--RVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTL  119 (386)
T ss_dssp             TTEEEEEECGGGCSSEEEEEEETTTT--EEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred             CCEEEEEcCcccCCCCEEEEEECCCC--eEEEEEECCCCC--cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC
Confidence            555555454     568999999998  788887643333  499999999887765          3578999999887


Q ss_pred             -----cc--c--------cceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          90 -----FI--Q--------QVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        90 -----~~--~--------~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                           +.  .        ....+.|+|||+++.+++...    .+.|.++|..+.+....+
T Consensus       120 ~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~----~~~VsVID~~t~~vv~tI  176 (386)
T 3sjl_D          120 LPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSP----APAVGVVDLEGKAFKRML  176 (386)
T ss_dssp             CEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSS----SCEEEEEETTTTEEEEEE
T ss_pred             eEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCC----CCeEEEEECCCCcEEEEE
Confidence                 21  1        467799999999999887521    237999999887765544

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=98.50  E-value=1.9e-06  Score=59.71  Aligned_cols=91  Identities=15%  Similarity=0.149  Sum_probs=72.1

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEecCCC-CCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc----ccc
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVS-KNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI----QQV   94 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~-~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~----~~i   94 (148)
                      +++|++++.++.|.+||.+++  +.+..+..+. ..+.++.+.|+|++++  +.++.+..||. ++     +.    ..+
T Consensus         5 ~~~lv~~~~~~~v~~~d~~tG--~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~   79 (276)
T 3no2_A            5 QHLLVGGSGWNKIAIINKDTK--EIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEM   79 (276)
T ss_dssp             CEEEEECTTCSEEEEEETTTT--EEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEE
T ss_pred             CcEEEeeCCCCEEEEEECCCC--eEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccc
Confidence            788999899999999999898  8888887655 4678889999999888  45778999998 45     22    356


Q ss_pred             eEEEEccCCCEEEEEec-CCceecCeeEEEeec
Q psy7062          95 NALRITPDKQLLASAEE-LSCCYCGAAVFVYNS  126 (148)
Q Consensus        95 ~~~~~sp~~~~l~~~~~-d~~~~~~~~i~~~d~  126 (148)
                      .++.+.|+|+.+++.+. ++      ++..+|.
T Consensus        80 ~~~~~~~dG~~lv~~~~~~~------~v~~vd~  106 (276)
T 3no2_A           80 QTARILPDGNALVAWCGHPS------TILEVNM  106 (276)
T ss_dssp             EEEEECTTSCEEEEEESTTE------EEEEECT
T ss_pred             cccEECCCCCEEEEecCCCC------EEEEEeC
Confidence            77889999999988775 44      5655554

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=98.49  E-value=4.6e-06  Score=58.92  Aligned_cols=119  Identities=11%  Similarity=0.011  Sum_probs=80.7

Q ss_pred             cEEEEEeCCCCccEEEEEecC----------CeEEEEeCCCCCCCceEEecCC-CCCEEEEEEccCCCEEEEEeCCCcEE
Q psy7062          14 QISTVFDSKHLVEMVAALGGY----------QHIRMYDFGSNNPNPVINCEGV-SKNVVEVGFQEDGKWMFTGGEDCRAR   82 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d----------~~v~~~d~~~~~~~~~~~~~~~-~~~i~~~~~sp~~~~l~~~~~~~~i~   82 (148)
                      +..++++++  +++++++..+          +.|.++|.++.  +....+... ......++++|+++.++.+..  .+.
T Consensus       174 p~~i~~~~d--G~l~v~~~~~~~~~~~~~~~~~v~~id~~t~--~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~  247 (328)
T 3dsm_A          174 PTSLVMDKY--NKMWTITDGGYEGSPYGYEAPSLYRIDAETF--TVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIW  247 (328)
T ss_dssp             BCCCEECTT--SEEEEEBCCBCTTCSSCBCCCEEEEEETTTT--EEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEE
T ss_pred             ccceEEcCC--CCEEEEECCCccCCccccCCceEEEEECCCC--eEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEE
Confidence            456777776  7777775554          68999999987  665555432 346889999999998877755  899


Q ss_pred             EEECCcc-c------c---ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeecCCCcceeccCcccCc
Q psy7062          83 IWDLSLC-F------I---QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNTLVKP  141 (148)
Q Consensus        83 l~d~~~~-~------~---~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~~~~~  141 (148)
                      +||..+. +      .   .....++++| +++.+++...  .......|.+||.. .+....+..-..|
T Consensus       248 ~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~--~y~~~~~V~v~d~~-g~~~~~i~~G~~P  314 (328)
T 3dsm_A          248 RMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAI--DYQQQGIVYRYSPQ-GKLIDEFYVGIIP  314 (328)
T ss_dssp             EEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECT--TSSSEEEEEEECTT-CCEEEEEEEEESE
T ss_pred             EEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEccc--ccccCCEEEEECCC-CCEEEEEEeccCc
Confidence            9999776 1      1   3578899999 4555554411  00013389999987 6665555444444

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=98.44  E-value=2.3e-06  Score=66.69  Aligned_cols=108  Identities=7%  Similarity=0.002  Sum_probs=74.2

Q ss_pred             EEEEEeCCCCccEEEEEecC-----CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCc---------
Q psy7062          15 ISTVFDSKHLVEMVAALGGY-----QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCR---------   80 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d-----~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~---------   80 (148)
                      ..++|+|+  |++|+.++.+     .+|++||++++  +.+.. ..+...+..++|+|| +.++.++.+..         
T Consensus       166 ~~~~~SPD--G~~la~~~~~~G~e~~~i~v~dl~tg--~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~  239 (741)
T 1yr2_A          166 DAWAASDD--GRLLAYSVQDGGSDWRTVKFVGVADG--KPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQAL  239 (741)
T ss_dssp             EEEEECTT--SSEEEEEEEETTCSEEEEEEEETTTC--CEEEE-EEEEEESCCCEESTT-SEEEEEECCCC--------C
T ss_pred             EeEEECCC--CCEEEEEEcCCCCceEEEEEEECCCC--CCCCc-cCCCceeccEEEECC-CEEEEEEecCcccccccccC
Confidence            45677877  7887775544     36999999998  54432 111222357899999 98888776543         


Q ss_pred             -----EEEEECCcc-------cc-----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          81 -----ARIWDLSLC-------FI-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        81 -----i~l~d~~~~-------~~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                           |++|++.+.       +.     ..+..+.|+|||++|+..+.++.- ....|++||+.++
T Consensus       240 ~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~-~~~~l~~~d~~~~  304 (741)
T 1yr2_A          240 NYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTD-PVNTVHVARVTNG  304 (741)
T ss_dssp             CCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTC-SCCEEEEEEEETT
T ss_pred             CCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCC-CcceEEEEECCCC
Confidence                 889998655       22     146788999999988887754311 1347999998765

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=98.42  E-value=1.1e-05  Score=54.69  Aligned_cols=107  Identities=9%  Similarity=0.020  Sum_probs=77.2

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---   89 (148)
                      .+..++++++  +.++++...++.|.+|+..+.  ............+.+++++++|+.+++...++.|..||....   
T Consensus       109 ~p~~i~~~~~--g~l~v~~~~~~~i~~~~~~~~--~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~  184 (270)
T 1rwi_B          109 YPEGLAVDTQ--GAVYVADRGNNRVVKLAAGSK--TQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQV  184 (270)
T ss_dssp             SEEEEEECTT--CCEEEEEGGGTEEEEECTTCC--SCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEE
T ss_pred             CCcceEECCC--CCEEEEECCCCEEEEEECCCc--eeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceE
Confidence            4567888886  677777566789999977654  333222223346778999999997777777889999998765   


Q ss_pred             -c--c--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          90 -F--I--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        90 -~--~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                       .  .  ..+..++++++|..+++...++      .|..||....
T Consensus       185 ~~~~~~~~~p~~i~~d~~g~l~v~~~~~~------~v~~~~~~~~  223 (270)
T 1rwi_B          185 VLPFTDITAPWGIAVDEAGTVYVTEHNTN------QVVKLLAGST  223 (270)
T ss_dssp             ECCCSSCCSEEEEEECTTCCEEEEETTTS------CEEEECTTCS
T ss_pred             eecccCCCCceEEEECCCCCEEEEECCCC------cEEEEcCCCC
Confidence             1  1  5578899999997766665544      7999987643

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=98.40  E-value=1.3e-05  Score=55.46  Aligned_cols=103  Identities=8%  Similarity=0.030  Sum_probs=72.9

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCC-CCCCCc---eEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFG-SNNPNP---VINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~-~~~~~~---~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~   89 (148)
                      +..++|+++  ++++++.+.++.|.+|++. ++  ..   ...+..+...+.+++++++|+++++.  ++.|.+||....
T Consensus       174 ~~gi~~s~d--g~~lv~~~~~~~i~~~~~~~~g--~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~g~  247 (296)
T 3e5z_A          174 PNGLAFLPS--GNLLVSDTGDNATHRYCLNARG--ETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPDGD  247 (296)
T ss_dssp             EEEEEECTT--SCEEEEETTTTEEEEEEECSSS--CEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTTSC
T ss_pred             CccEEECCC--CCEEEEeCCCCeEEEEEECCCC--cCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCCCC
Confidence            467888887  7777776677899999997 33  32   23333345566789999999976666  788999998744


Q ss_pred             ----cc--ccceEEEE-ccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          90 ----FI--QQVNALRI-TPDKQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        90 ----~~--~~i~~~~~-sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                          +.  ..+.+++| +|+++.|.+++.++       +..++..+.
T Consensus       248 ~~~~~~~~~~~~~~~f~~~d~~~L~v~t~~~-------l~~~~~~~~  287 (296)
T 3e5z_A          248 ELGRVLTPQTTSNLCFGGPEGRTLYMTVSTE-------FWSIETNVR  287 (296)
T ss_dssp             EEEEEECSSCCCEEEEESTTSCEEEEEETTE-------EEEEECSCC
T ss_pred             EEEEEECCCCceeEEEECCCCCEEEEEcCCe-------EEEEEcccc
Confidence                22  33889999 58998888887644       555555533

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=98.39  E-value=2.7e-05  Score=54.51  Aligned_cols=105  Identities=12%  Similarity=0.051  Sum_probs=72.7

Q ss_pred             cEEEEEeCCCCccEEEEEecC----CeEEEEeCCCCCCCceEEec--CCCCCEEEEEEccCCCEEEEEeC------CCcE
Q psy7062          14 QISTVFDSKHLVEMVAALGGY----QHIRMYDFGSNNPNPVINCE--GVSKNVVEVGFQEDGKWMFTGGE------DCRA   81 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d----~~v~~~d~~~~~~~~~~~~~--~~~~~i~~~~~sp~~~~l~~~~~------~~~i   81 (148)
                      ...++++++  ++++++...+    +.|.+||.+++  .....+.  .+...+..+.++|+|+.+++...      .+.+
T Consensus        89 ~~~i~~~~d--g~l~v~~~~~~~~~~~i~~~d~~~~--~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l  164 (333)
T 2dg1_A           89 PAAIKIHKD--GRLFVCYLGDFKSTGGIFAATENGD--NLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGV  164 (333)
T ss_dssp             EEEEEECTT--SCEEEEECTTSSSCCEEEEECTTSC--SCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEE
T ss_pred             cceEEECCC--CcEEEEeCCCCCCCceEEEEeCCCC--EEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceE
Confidence            467777777  7787775555    58999999877  4332322  24467899999999998777653      3556


Q ss_pred             EEEECCcc----cc---ccceEEEEccCCCEEEEEe-cCCceecCeeEEEeecCC
Q psy7062          82 RIWDLSLC----FI---QQVNALRITPDKQLLASAE-ELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        82 ~l~d~~~~----~~---~~i~~~~~sp~~~~l~~~~-~d~~~~~~~~i~~~d~~~  128 (148)
                      ..+|....    +.   ..+..++|+|+++.++.+. .++      .|.+||...
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~------~i~~~d~~~  213 (333)
T 2dg1_A          165 YYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTAN------RLHRIALED  213 (333)
T ss_dssp             EEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGT------EEEEEEECT
T ss_pred             EEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCC------eEEEEEecC
Confidence            67776554    21   4578899999998665554 334      799999853

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=98.36  E-value=2.2e-05  Score=56.63  Aligned_cols=101  Identities=12%  Similarity=-0.109  Sum_probs=72.0

Q ss_pred             ccEEEEEec--CC---eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEe----------CCCcEEEEECCcc
Q psy7062          25 VEMVAALGG--YQ---HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGG----------EDCRARIWDLSLC   89 (148)
Q Consensus        25 ~~~l~~~~~--d~---~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~----------~~~~i~l~d~~~~   89 (148)
                      +..+++...  ..   +|.++|..++  +.+..+..-.. . .+.++|||+.++.+.          .++.+.+||..+.
T Consensus        32 ~~~~yv~~~~~~~~~~~v~v~D~~t~--~~~~~i~~g~~-p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~  107 (373)
T 2mad_H           32 GRRSYINLPAHHSAIIQQWVLDAGSG--SILGHVNGGFL-P-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTF  107 (373)
T ss_pred             CCEEEEeCCcccCCccEEEEEECCCC--eEEEEecCCCC-C-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCC
Confidence            455555342  22   8899999988  77777764322 3 899999999988875          3578999999875


Q ss_pred             -----cc-c---------cceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceec
Q psy7062          90 -----FI-Q---------QVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVA  134 (148)
Q Consensus        90 -----~~-~---------~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~  134 (148)
                           +. .         ....+.|+|||++|+.++...    ...|.++| .+.+....
T Consensus       108 ~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~----~~~v~viD-~t~~~~~~  162 (373)
T 2mad_H          108 LPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAA----GPAVGLVV-QGGSSDDQ  162 (373)
T ss_pred             cEEEEEECCCccccccCCCccceEECCCCCEEEEEecCC----CCeEEEEE-CCCCEEeE
Confidence                 11 1         245789999999999987531    23799999 87765544

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.36  E-value=8.6e-06  Score=58.01  Aligned_cols=111  Identities=9%  Similarity=-0.050  Sum_probs=69.8

Q ss_pred             EEEEEeC-CCCccEEEEEecC------CeEEEEeCCCCCCCceEEecCC--CCCEEEEEEccCCCEEEEEeCC-----Cc
Q psy7062          15 ISTVFDS-KHLVEMVAALGGY------QHIRMYDFGSNNPNPVINCEGV--SKNVVEVGFQEDGKWMFTGGED-----CR   80 (148)
Q Consensus        15 ~~~~~~~-~~~~~~l~~~~~d------~~v~~~d~~~~~~~~~~~~~~~--~~~i~~~~~sp~~~~l~~~~~~-----~~   80 (148)
                      ..++|+| +  +..++..+.+      ..|.+||++++  + ...+..+  ...+..+.|+|+|+.++..+.+     +.
T Consensus       191 ~~~~~sp~d--g~~l~~~~~~~~~~~~~~l~~~d~~~~--~-~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~  265 (396)
T 3c5m_A          191 GHPIYRPFD--DSTVGFCHEGPHDLVDARMWLVNEDGS--N-VRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRV  265 (396)
T ss_dssp             EEEEEETTE--EEEEEEEECSCSSSCSCCCEEEETTSC--C-CEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEE
T ss_pred             ccceECCCC--CCEEEEEecCCCCCCCceEEEEECCCC--c-eeEeeccCCCccccceEECCCCCEEEEEecCCCCccce
Confidence            4567777 4  5555554443      35888888765  3 3333323  2357889999999977666543     34


Q ss_pred             EEEEECCcc----cc-ccceEEEEcc-CCCEEEEEecCCc----------eecCeeEEEeecCCCc
Q psy7062          81 ARIWDLSLC----FI-QQVNALRITP-DKQLLASAEELSC----------CYCGAAVFVYNSCYPA  130 (148)
Q Consensus        81 i~l~d~~~~----~~-~~i~~~~~sp-~~~~l~~~~~d~~----------~~~~~~i~~~d~~~~~  130 (148)
                      +++||+.++    +. .......|+| +++.++.++.+..          ......|++||+....
T Consensus       266 l~~~d~~~g~~~~l~~~~~~~~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~  331 (396)
T 3c5m_A          266 IYKANPETLENEEVMVMPPCSHLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKS  331 (396)
T ss_dssp             EEEECTTTCCEEEEEECCSEEEEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTB
T ss_pred             EEEEECCCCCeEEeeeCCCCCCCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCc
Confidence            999999876    22 1112288999 9998887653210          0123479999987554

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=98.34  E-value=5.5e-05  Score=52.30  Aligned_cols=108  Identities=11%  Similarity=0.116  Sum_probs=74.7

Q ss_pred             cEEEEEe----CCCCccEE-EEEecCCeEEEEeCC-CCCCC---ceEEecCCC-CCEEEEEEccCCCEEEEEeCCCcEEE
Q psy7062          14 QISTVFD----SKHLVEMV-AALGGYQHIRMYDFG-SNNPN---PVINCEGVS-KNVVEVGFQEDGKWMFTGGEDCRARI   83 (148)
Q Consensus        14 ~~~~~~~----~~~~~~~l-~~~~~d~~v~~~d~~-~~~~~---~~~~~~~~~-~~i~~~~~sp~~~~l~~~~~~~~i~l   83 (148)
                      +..++++    ++  ++.+ ++...++.|.+||.+ .+...   ....+..+. ..+..++++++|+++++...++.|..
T Consensus       174 ~~~i~~~~~~d~d--g~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~  251 (314)
T 1pjx_A          174 PNGIAVRHMNDGR--PYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEV  251 (314)
T ss_dssp             EEEEEEEECTTSC--EEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEE
T ss_pred             cceEEEecccCCC--CCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEE
Confidence            4567788    66  6544 443457899999986 33000   222333333 56888999999998888878889999


Q ss_pred             EECCcc-----cc---ccceEEEEccCCCEEEEEec-CCceecCeeEEEeecCCC
Q psy7062          84 WDLSLC-----FI---QQVNALRITPDKQLLASAEE-LSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        84 ~d~~~~-----~~---~~i~~~~~sp~~~~l~~~~~-d~~~~~~~~i~~~d~~~~  129 (148)
                      ||..++     +.   ..+.+++|+|+++.|..++. ++      .|..|++...
T Consensus       252 ~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~------~l~~~~~~~~  300 (314)
T 1pjx_A          252 FGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENN------AVWKFEWQRN  300 (314)
T ss_dssp             ECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTT------EEEEEECSSC
T ss_pred             EcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCC------eEEEEeCCCC
Confidence            999854     22   56889999999996655543 33      6888987654

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=98.31  E-value=2.7e-05  Score=60.42  Aligned_cols=111  Identities=11%  Similarity=0.069  Sum_probs=75.1

Q ss_pred             EEEEEeCCCCccEEEEEecCCe----------------EEEEeCCCCCCCceEEec--CCCCCEEEEEEccCCCEEEEEe
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQH----------------IRMYDFGSNNPNPVINCE--GVSKNVVEVGFQEDGKWMFTGG   76 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~----------------v~~~d~~~~~~~~~~~~~--~~~~~i~~~~~sp~~~~l~~~~   76 (148)
                      ..++|+|+  ++.|+.++.++.                |.+|++.++..+....+.  .+...+..+.|+|||++++..+
T Consensus       174 ~~~~wspD--g~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~  251 (710)
T 2xdw_A          174 SCMAWTHD--GKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSI  251 (710)
T ss_dssp             CCEEECTT--SSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEE
T ss_pred             ceEEEEeC--CCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEE
Confidence            45788888  777777676655                999999887211122223  3456688999999999888766


Q ss_pred             C-----CCcEEEEECCc------c------cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          77 E-----DCRARIWDLSL------C------FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        77 ~-----~~~i~l~d~~~------~------~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                      .     +..+++||+.+      +      +.   .... -.|+|+|+.|+..+..+  .....|.+||+.++.
T Consensus       252 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~s~~~--~~~~~l~~~d~~~~~  322 (710)
T 2xdw_A          252 REGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEY-DYVTNEGTVFTFKTNRH--SPNYRLINIDFTDPE  322 (710)
T ss_dssp             ECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCE-EEEEEETTEEEEEECTT--CTTCEEEEEETTSCC
T ss_pred             EccCCCccEEEEEECcccccccCCccceEEeeCCCCcEE-EEEeccCCEEEEEECCC--CCCCEEEEEeCCCCC
Confidence            4     56899999975      3      22   2233 35889888777665432  123479999987653

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=98.30  E-value=6e-05  Score=53.17  Aligned_cols=107  Identities=12%  Similarity=-0.073  Sum_probs=75.4

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----   89 (148)
                      ..++++.   +.++++...++.|.++|.+++  +.+.++. .......++++++++.+++...++.+.+||..+.     
T Consensus        47 ~~i~~~~---~~lyv~~~~~~~v~viD~~t~--~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~  120 (328)
T 3dsm_A           47 QSMVIRD---GIGWIVVNNSHVIFAIDINTF--KEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGY  120 (328)
T ss_dssp             EEEEEET---TEEEEEEGGGTEEEEEETTTC--CEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEE
T ss_pred             eEEEEEC---CEEEEEEcCCCEEEEEECccc--EEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEE
Confidence            3445543   456666567789999999998  7777775 4567889999999965555548899999999887     


Q ss_pred             cc--c------cceEEEEccCCCEEEEEec--CCceecCeeEEEeecCCCcceecc
Q psy7062          90 FI--Q------QVNALRITPDKQLLASAEE--LSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        90 ~~--~------~i~~~~~sp~~~~l~~~~~--d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                      +.  .      ....+++ . +..+..++.  ++      .|.++|..+.+.....
T Consensus       121 i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~------~v~viD~~t~~~~~~i  168 (328)
T 3dsm_A          121 IECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQN------RILKIDTETDKVVDEL  168 (328)
T ss_dssp             EECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCC------EEEEEETTTTEEEEEE
T ss_pred             EEcCCccccCCCcceEEE-E-CCEEEEEcCCCCC------EEEEEECCCCeEEEEE
Confidence            22  3      6677888 4 444445442  34      8999998876654443

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=98.29  E-value=1e-05  Score=59.51  Aligned_cols=93  Identities=14%  Similarity=-0.039  Sum_probs=71.0

Q ss_pred             CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEe----------CCCcEEEEECCcc-----cc-c------
Q psy7062          35 QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGG----------EDCRARIWDLSLC-----FI-Q------   92 (148)
Q Consensus        35 ~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~----------~~~~i~l~d~~~~-----~~-~------   92 (148)
                      +.|.++|..+.  +.+.++..-.. . .+.++|||+.++.+.          .++.+.++|..+.     +. .      
T Consensus        99 ~~VsVID~~t~--~vv~~I~vG~~-P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~  174 (426)
T 3c75_H           99 TQQFVIDGSTG--RILGMTDGGFL-P-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFL  174 (426)
T ss_dssp             EEEEEEETTTT--EEEEEEEECSS-C-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCC
T ss_pred             CeEEEEECCCC--EEEEEEECCCC-C-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccc
Confidence            68999999998  88888764333 3 899999999887775          3678999999887     11 1      


Q ss_pred             ---cceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          93 ---QVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        93 ---~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                         ....+.++|||+++++++...    ...|.++|..+.+....+
T Consensus       175 ~g~~P~~~~~spDGk~lyV~n~~~----~~~VsVID~~t~kvv~~I  216 (426)
T 3c75_H          175 VGTYQWMNALTPDNKNLLFYQFSP----APAVGVVDLEGKTFDRML  216 (426)
T ss_dssp             BSCCGGGSEECTTSSEEEEEECSS----SCEEEEEETTTTEEEEEE
T ss_pred             cCCCcceEEEcCCCCEEEEEecCC----CCeEEEEECCCCeEEEEE
Confidence               356789999999999987532    337999999887655443

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=98.28  E-value=1.6e-05  Score=61.60  Aligned_cols=110  Identities=13%  Similarity=0.076  Sum_probs=72.9

Q ss_pred             EEEEEeCCCCccEEEEEecCCe-------------EEEEeCCCCCCC--ceEEecCCCCCEEEEEEccCCCEEEEEeCCC
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQH-------------IRMYDFGSNNPN--PVINCEGVSKNVVEVGFQEDGKWMFTGGEDC   79 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~-------------v~~~d~~~~~~~--~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~   79 (148)
                      ..++|+++  ++.|+..+.+..             |.+|++.++..+  .+.....+...+..+.|+|||++++..+.++
T Consensus       171 ~~~~wspD--g~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~  248 (695)
T 2bkl_A          171 ATPKWTPD--SKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRG  248 (695)
T ss_dssp             CCCEECTT--SSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEET
T ss_pred             cceEEecC--CCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCC
Confidence            56888988  777777677655             999999987211  2233334556788999999999888776655


Q ss_pred             ----cEEEEECCcc----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          80 ----RARIWDLSLC----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        80 ----~i~l~d~~~~----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                          .++++|...+    +.   .......| +++++++.+..+.   ....|.+||+.++.
T Consensus       249 ~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~---~~~~l~~~d~~~~~  306 (695)
T 2bkl_A          249 WSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDRFYVLTDEGA---PRQRVFEVDPAKPA  306 (695)
T ss_dssp             TTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTEEEEEECTTC---TTCEEEEEBTTBCS
T ss_pred             CCceEEEEEcCCCCceEEeecCCCceEEEEe-cCCcEEEEECCCC---CCCEEEEEeCCCCC
Confidence                6777776544    22   44555556 5666444444321   23489999987653

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=98.26  E-value=3.3e-05  Score=56.39  Aligned_cols=108  Identities=9%  Similarity=0.027  Sum_probs=76.1

Q ss_pred             ecCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCC--cEEEEECCc
Q psy7062          11 AFGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDC--RARIWDLSL   88 (148)
Q Consensus        11 ~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~--~i~l~d~~~   88 (148)
                      +..+..++++++  ++++++...++.|++||.+++  ........ ..... ++|+|+++.++.++.++  .+..+|...
T Consensus       130 ~~~P~~la~d~~--g~lyv~d~~~~~I~~id~~~g--~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~  203 (409)
T 3hrp_A          130 FKYMWGIAAVGN--NTVLAYQRDDPRVRLISVDDN--KVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKAS  203 (409)
T ss_dssp             CCCEEEEEECST--TEEEEEETTTTEEEEEETTTT--EEEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGG
T ss_pred             cCCceEEEEeCC--CCEEEEecCCCcEEEEECCCC--EEEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCC
Confidence            445778899977  778787666689999999876  44333332 22233 89999999988888765  788888765


Q ss_pred             c-----c------c-ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          89 C-----F------I-QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        89 ~-----~------~-~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                      .     +      . ..+.+++++|+...|..+..++      +|+.||.....
T Consensus       204 ~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~------~I~~~d~~~~~  251 (409)
T 3hrp_A          204 GWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNK------NFGRFNVKTQE  251 (409)
T ss_dssp             TTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTC------EEEEEETTTCC
T ss_pred             CceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCC------cEEEEECCCCC
Confidence            4     2      1 5578899999544455555544      79999876543

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=98.17  E-value=1.9e-05  Score=61.27  Aligned_cols=106  Identities=15%  Similarity=0.201  Sum_probs=70.4

Q ss_pred             EEEEEeCCCCccEEEEEe-----cCCeEEEEeCCCCCCCceEE-ecCCCCCEEEEEEccCCCEEEEEeCCC---------
Q psy7062          15 ISTVFDSKHLVEMVAALG-----GYQHIRMYDFGSNNPNPVIN-CEGVSKNVVEVGFQEDGKWMFTGGEDC---------   79 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~-----~d~~v~~~d~~~~~~~~~~~-~~~~~~~i~~~~~sp~~~~l~~~~~~~---------   79 (148)
                      ..++|+|+  +++|+.+.     +..+|++||++++  +.+.. +.  ......++|+ |++.++.++.+.         
T Consensus       132 ~~~~~SpD--g~~lAy~~~~~G~~~~~i~v~dl~tg--~~~~~~~~--~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~  204 (693)
T 3iuj_A          132 DQLSFSRD--GRILAYSLSLAGSDWREIHLMDVESK--QPLETPLK--DVKFSGISWL-GNEGFFYSSYDKPDGSELSAR  204 (693)
T ss_dssp             EEEEECTT--SSEEEEEEECSSCCEEEEEEEETTTC--SEEEEEEE--EEESCCCEEE-TTTEEEEEESSCCC-------
T ss_pred             EEEEECCC--CCEEEEEEecCCCceEEEEEEECCCC--CCCccccC--CceeccEEEe-CCCEEEEEEecCccccccccc
Confidence            34567777  77777422     2247999999998  54432 21  1112467899 999888887763         


Q ss_pred             ----cEEEEECCcc-------cc--c----cceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          80 ----RARIWDLSLC-------FI--Q----QVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        80 ----~i~l~d~~~~-------~~--~----~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                          .|++|++.+.       +.  .    ....+.|+|||++|+.....+.  ....|+++|+.++
T Consensus       205 ~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~--~~~~i~~~d~~~~  269 (693)
T 3iuj_A          205 TDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANST--SGNRLYVKDLSQE  269 (693)
T ss_dssp             CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSS--SCCEEEEEETTST
T ss_pred             CCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCC--CCcEEEEEECCCC
Confidence                4999998765       22  2    2567899999998766554221  1247999998765

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=98.16  E-value=9.4e-05  Score=51.12  Aligned_cols=106  Identities=9%  Similarity=-0.065  Sum_probs=78.1

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCC-CCCEEEEEEccCCCEEEEEeC-CCcEEEEECCcc--
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGV-SKNVVEVGFQEDGKWMFTGGE-DCRARIWDLSLC--   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~-~~~i~~~~~sp~~~~l~~~~~-~~~i~l~d~~~~--   89 (148)
                      ...+++.++  |+++++  .++.+..||. ++  +.+..+..+ ...+.++.+.++|+++++.+. ++.+..+|....  
T Consensus        39 ~~~~~~~pd--G~ilvs--~~~~V~~~d~-~G--~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l  111 (276)
T 3no2_A           39 CNSVAATKA--GEILFS--YSKGAKMITR-DG--RELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVL  111 (276)
T ss_dssp             CCEEEECTT--SCEEEE--CBSEEEEECT-TS--CEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECTTSCEE
T ss_pred             CcCeEECCC--CCEEEe--CCCCEEEECC-CC--CEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeCCCCEE
Confidence            456677776  788884  4778999999 66  788888764 356888899999999998877 777777776333  


Q ss_pred             --cc---------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCccee
Q psy7062          90 --FI---------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVV  133 (148)
Q Consensus        90 --~~---------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~  133 (148)
                        +.         .....+.+.++|+++++...++      .|..||.. .+...
T Consensus       112 ~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~------~v~~~d~~-G~~~w  159 (276)
T 3no2_A          112 SKTEFETGIERPHAQFRQINKNKKGNYLVPLFATS------EVREIAPN-GQLLN  159 (276)
T ss_dssp             EEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTT------EEEEECTT-SCEEE
T ss_pred             EEEeccCCCCcccccccCceECCCCCEEEEecCCC------EEEEECCC-CCEEE
Confidence              11         2345567889999999888766      78888876 55443

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=98.16  E-value=2.5e-05  Score=56.81  Aligned_cols=102  Identities=13%  Similarity=0.071  Sum_probs=72.2

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCC---------CCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEE
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNN---------PNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIW   84 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~---------~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~   84 (148)
                      ...+++++.  ..++++|+.+ .+.+|+++...         .+...... +.. |+.++|  |+++|+++ .++.+++|
T Consensus        40 ~nlLais~~--~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~-lp~-V~~l~f--d~~~L~v~-~~~~l~v~  111 (388)
T 1xip_A           40 LQNLDISNS--KSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKE-IPD-VIFVCF--HGDQVLVS-TRNALYSL  111 (388)
T ss_dssp             CBCEEEETT--TTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEE-CTT-EEEEEE--ETTEEEEE-ESSEEEEE
T ss_pred             ccEEEEcCC--CCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEee-CCC-eeEEEE--CCCEEEEE-cCCcEEEE
Confidence            466777777  7788886665 66679876431         11222333 556 999999  99999998 88999999


Q ss_pred             ECCcc--------ccccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          85 DLSLC--------FIQQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        85 d~~~~--------~~~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                      |+.+.        +..++..+.+.+.  .++++..||      .+.+||+.....
T Consensus       112 dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG------~L~v~dl~~~~~  158 (388)
T 1xip_A          112 DLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVN------DLSALDLRTKST  158 (388)
T ss_dssp             ESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTS------EEEEEETTTCCE
T ss_pred             EchhhhccCccceeecceeeEEecCC--CEEEEECCC------CEEEEEccCCcc
Confidence            99776        2255666665443  388888888      999999985543

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=98.13  E-value=0.00022  Score=49.22  Aligned_cols=94  Identities=12%  Similarity=-0.002  Sum_probs=67.5

Q ss_pred             cCcEEEEEeCCCCccEEEE-------EecCCeEEEEeCCCCCCCceEEecC-----CCCCEEEEEEccC-CCEEEEEeCC
Q psy7062          12 FGQISTVFDSKHLVEMVAA-------LGGYQHIRMYDFGSNNPNPVINCEG-----VSKNVVEVGFQED-GKWMFTGGED   78 (148)
Q Consensus        12 ~~~~~~~~~~~~~~~~l~~-------~~~d~~v~~~d~~~~~~~~~~~~~~-----~~~~i~~~~~sp~-~~~l~~~~~~   78 (148)
                      ..+..++|+++  +.++++       ...++.|.+||..++  +.. .+..     +...+.++.++++ ++.+++.. .
T Consensus        18 ~~~~~~~~~~~--g~l~~~~~~~~~~~~~~~~i~~~d~~~g--~~~-~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~   91 (314)
T 1pjx_A           18 PGAEGPVFDKN--GDFYIVAPEVEVNGKPAGEILRIDLKTG--KKT-VICKPEVNGYGGIPAGCQCDRDANQLFVADM-R   91 (314)
T ss_dssp             TTCEEEEECTT--SCEEEEETTCEETTEECCEEEEECTTTC--CEE-EEECCEETTEECCEEEEEECSSSSEEEEEET-T
T ss_pred             CCccCceECCC--CCEEEEEeccccCCCCCCEEEEEeCCCC--cEE-EEEecccCCCCCCCceEEEecCCCcEEEEEC-C
Confidence            34678999966  777777       577889999998876  432 2222     4467899999999 76555543 4


Q ss_pred             CcEEEEECCcc----c-c--------ccceEEEEccCCCEEEEEecC
Q psy7062          79 CRARIWDLSLC----F-I--------QQVNALRITPDKQLLASAEEL  112 (148)
Q Consensus        79 ~~i~l~d~~~~----~-~--------~~i~~~~~sp~~~~l~~~~~d  112 (148)
                      +.+..||.. +    + .        ..+..++++|+++.+++...+
T Consensus        92 ~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~  137 (314)
T 1pjx_A           92 LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAG  137 (314)
T ss_dssp             TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBC
T ss_pred             CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCc
Confidence            478889987 4    3 2        347899999999987776543

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=98.13  E-value=0.0002  Score=48.91  Aligned_cols=103  Identities=9%  Similarity=0.031  Sum_probs=75.5

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceE-EecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVI-NCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~-~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--   89 (148)
                      .+.+++++++  +.+.++...++.+.+||.. +  +... ....+...+.+++++++|..+++...++.+..||....  
T Consensus        16 ~~~~i~~d~~--g~l~v~~~~~~~v~~~d~~-~--~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~   90 (299)
T 2z2n_A           16 GPYGITVSDK--GKVWITQHKANMISCINLD-G--KITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKKGIIK   90 (299)
T ss_dssp             CEEEEEECTT--SCEEEEETTTTEEEEECTT-C--CEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEE
T ss_pred             CccceEECCC--CCEEEEecCCCcEEEEcCC-C--CeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCCCcEE
Confidence            3567777877  7777774457899999998 5  3322 22234567899999999998888777888999998633  


Q ss_pred             -cc-----ccceEEEEccCCCEEEEEecCCceecCeeEEEeec
Q psy7062          90 -FI-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNS  126 (148)
Q Consensus        90 -~~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~  126 (148)
                       +.     ..+..++++|+++.+++...++      .|..||.
T Consensus        91 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~------~i~~~d~  127 (299)
T 2z2n_A           91 EYTLPNPDSAPYGITEGPNGDIWFTEMNGN------RIGRITD  127 (299)
T ss_dssp             EEECSSTTCCEEEEEECTTSCEEEEETTTT------EEEEECT
T ss_pred             EEeCCCcCCCceeeEECCCCCEEEEecCCc------eEEEECC
Confidence             21     4678899999998777765544      6888876

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=98.13  E-value=0.00035  Score=48.38  Aligned_cols=90  Identities=11%  Similarity=0.092  Sum_probs=66.9

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-c--
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-F--   90 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-~--   90 (148)
                      .++.+|+++. +.++++...++.|..||.+++  +. ..+. ....+.+++++|+|+++++.  ++.+.+||..++ +  
T Consensus        15 ~Egp~w~~~~-~~l~~~d~~~~~i~~~d~~~~--~~-~~~~-~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~~   87 (297)
T 3g4e_A           15 GESPVWEEVS-NSLLFVDIPAKKVCRWDSFTK--QV-QRVT-MDAPVSSVALRQSGGYVATI--GTKFCALNWKEQSAVV   87 (297)
T ss_dssp             EEEEEEETTT-TEEEEEETTTTEEEEEETTTC--CE-EEEE-CSSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEEEE
T ss_pred             ccCCeEECCC-CEEEEEECCCCEEEEEECCCC--cE-EEEe-CCCceEEEEECCCCCEEEEE--CCeEEEEECCCCcEEE
Confidence            5789999863 567777567789999999886  33 3333 45679999999999955543  568999999766 1  


Q ss_pred             -c--------ccceEEEEccCCCEEEEEe
Q psy7062          91 -I--------QQVNALRITPDKQLLASAE  110 (148)
Q Consensus        91 -~--------~~i~~~~~sp~~~~l~~~~  110 (148)
                       .        ..+..++++|+|+++++..
T Consensus        88 ~~~~~~~~~~~~~~di~~d~dG~l~~~~~  116 (297)
T 3g4e_A           88 LATVDNDKKNNRFNDGKVDPAGRYFAGTM  116 (297)
T ss_dssp             EEECCTTCSSEEEEEEEECTTSCEEEEEE
T ss_pred             EEecCCCCCCCCCCCEEECCCCCEEEecC
Confidence             1        3477899999999776553

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=98.10  E-value=2e-05  Score=56.91  Aligned_cols=96  Identities=11%  Similarity=-0.074  Sum_probs=70.8

Q ss_pred             ccEEEEEecCC----eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEe----------CCCcEEEEECCcc-
Q psy7062          25 VEMVAALGGYQ----HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGG----------EDCRARIWDLSLC-   89 (148)
Q Consensus        25 ~~~l~~~~~d~----~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~----------~~~~i~l~d~~~~-   89 (148)
                      ...+++...++    ++.+.|..+.  +.+.++..-...  .+.++||++.++.+.          .++.+.+||+.+. 
T Consensus        32 ~~~yV~~~~~~~~~d~vsvID~~t~--~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~  107 (368)
T 1mda_H           32 RRSHITLPAYFAGTTENWVSCAGCG--VTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL  107 (368)
T ss_dssp             TEEEEEECTTTCSSEEEEEEETTTT--EEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC
T ss_pred             CeEEEECCccCCccceEEEEECCCC--eEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCC
Confidence            34555534444    7889999998  888888743343  799999999887776          3678999999987 


Q ss_pred             ----cc-c---------cceEEEEccCCCEEEEEecCCceecCeeEEE--eecCC
Q psy7062          90 ----FI-Q---------QVNALRITPDKQLLASAEELSCCYCGAAVFV--YNSCY  128 (148)
Q Consensus        90 ----~~-~---------~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~--~d~~~  128 (148)
                          +. .         ....+.++|||++++++....    ...+.+  +|..+
T Consensus       108 vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~----~~~v~V~~iD~~t  158 (368)
T 1mda_H          108 PIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGS----SAAAGLSVPGASD  158 (368)
T ss_dssp             EEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSS----SCEEEEEETTTEE
T ss_pred             EEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCC----CCeEEEEEEchhh
Confidence                22 1         367899999999999887532    235777  88865

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=98.10  E-value=0.00028  Score=48.18  Aligned_cols=101  Identities=7%  Similarity=-0.125  Sum_probs=72.9

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceE-EecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVI-NCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~-~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---   89 (148)
                      +..++++++  +.++++...++.+..||. ++  +... ........+..+++.++|+.+++...++.+..||. ++   
T Consensus       101 ~~~i~~~~~--g~l~v~~~~~~~i~~~d~-~g--~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~  174 (299)
T 2z2n_A          101 PYGITEGPN--GDIWFTEMNGNRIGRITD-DG--KIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDIT  174 (299)
T ss_dssp             EEEEEECTT--SCEEEEETTTTEEEEECT-TC--CEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE
T ss_pred             ceeeEECCC--CCEEEEecCCceEEEECC-CC--CEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEE
Confidence            456777775  778777556789999998 44  3222 22334567899999999988887777789999998 44   


Q ss_pred             -c--c---ccceEEEEccCCCEEEEEecCCceecCeeEEEeec
Q psy7062          90 -F--I---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNS  126 (148)
Q Consensus        90 -~--~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~  126 (148)
                       +  .   ..+..++++++++.+++...++      .|..||.
T Consensus       175 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~------~i~~~~~  211 (299)
T 2z2n_A          175 EFKIPTPASGPVGITKGNDDALWFVEIIGN------KIGRITT  211 (299)
T ss_dssp             EEECSSTTCCEEEEEECTTSSEEEEETTTT------EEEEECT
T ss_pred             EeeCCCCCCcceeEEECCCCCEEEEccCCc------eEEEECC
Confidence             2  1   4577899999998766655444      6888887

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=98.08  E-value=9.5e-05  Score=53.72  Aligned_cols=103  Identities=10%  Similarity=-0.075  Sum_probs=67.5

Q ss_pred             EEEEeCCCCccEEEEEe----------cCCeEEEEeCCCCCCCceEEecCC-------CCCEEEEEEccCCCEEEEEeC-
Q psy7062          16 STVFDSKHLVEMVAALG----------GYQHIRMYDFGSNNPNPVINCEGV-------SKNVVEVGFQEDGKWMFTGGE-   77 (148)
Q Consensus        16 ~~~~~~~~~~~~l~~~~----------~d~~v~~~d~~~~~~~~~~~~~~~-------~~~i~~~~~sp~~~~l~~~~~-   77 (148)
                      .++++|+  ++.+++++          .++.|.+||..+.  +.+..+...       ......+.++|||++++.+.. 
T Consensus        82 ~va~spD--G~~lyVan~~~~r~~~G~~~~~VsviD~~t~--~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~  157 (386)
T 3sjl_D           82 NPVVADD--GSFIAHASTVFSRIARGERTDYVEVFDPVTL--LPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS  157 (386)
T ss_dssp             EEEECTT--SSCEEEEEEEEEETTEEEEEEEEEEECTTTC--CEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS
T ss_pred             cEEECCC--CCEEEEEcccccccccCCCCCEEEEEECCCC--eEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcC
Confidence            4888998  66666644          3568999999998  777766421       124557899999999888764 


Q ss_pred             -CCcEEEEECCcc-----ccccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062          78 -DCRARIWDLSLC-----FIQQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        78 -~~~i~l~d~~~~-----~~~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                       ++.+.++|+.+.     +..+-+...+..+.+.+++.+.||      ++.+.++..
T Consensus       158 ~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG------~~~~v~~~~  208 (386)
T 3sjl_D          158 PAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDG------SLAKVAFGT  208 (386)
T ss_dssp             SSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTS------CEEEEECCS
T ss_pred             CCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCC------CEEEEECCC
Confidence             689999999988     221111222322445555666655      555555543

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=98.01  E-value=0.00055  Score=48.13  Aligned_cols=90  Identities=12%  Similarity=-0.006  Sum_probs=65.8

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ....+|+++. +.++++...++.|..||.+++  + ...+. ....+.++.++|+|+++++.  +..+.+||..++    
T Consensus        51 ~egp~~~~~~-~~l~~~d~~~~~i~~~d~~~~--~-~~~~~-~~~~v~~i~~~~dg~l~v~~--~~gl~~~d~~~g~~~~  123 (326)
T 2ghs_A           51 GEGPTFDPAS-GTAWWFNILERELHELHLASG--R-KTVHA-LPFMGSALAKISDSKQLIAS--DDGLFLRDTATGVLTL  123 (326)
T ss_dssp             EEEEEEETTT-TEEEEEEGGGTEEEEEETTTT--E-EEEEE-CSSCEEEEEEEETTEEEEEE--TTEEEEEETTTCCEEE
T ss_pred             CcCCeEeCCC-CEEEEEECCCCEEEEEECCCC--c-EEEEE-CCCcceEEEEeCCCeEEEEE--CCCEEEEECCCCcEEE
Confidence            4678899864 566677667789999999876  3 33333 35679999999999977764  345999998765    


Q ss_pred             cc--------ccceEEEEccCCCEEEEEe
Q psy7062          90 FI--------QQVNALRITPDKQLLASAE  110 (148)
Q Consensus        90 ~~--------~~i~~~~~sp~~~~l~~~~  110 (148)
                      +.        ..+..+.++|+|+++++..
T Consensus       124 ~~~~~~~~~~~~~~~i~~d~~G~l~v~~~  152 (326)
T 2ghs_A          124 HAELESDLPGNRSNDGRMHPSGALWIGTM  152 (326)
T ss_dssp             EECSSTTCTTEEEEEEEECTTSCEEEEEE
T ss_pred             EeeCCCCCCCCCCCCEEECCCCCEEEEeC
Confidence            11        3577899999999766554

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=97.96  E-value=0.0004  Score=47.92  Aligned_cols=109  Identities=10%  Similarity=0.049  Sum_probs=71.7

Q ss_pred             EEEEEeCCCCccEEEEEec--CCeEEEEeCCCCCCCceEEecC-CCCCEEEEEEccCCCEEEEEe-CCCcEEEEECCcc-
Q psy7062          15 ISTVFDSKHLVEMVAALGG--YQHIRMYDFGSNNPNPVINCEG-VSKNVVEVGFQEDGKWMFTGG-EDCRARIWDLSLC-   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~--d~~v~~~d~~~~~~~~~~~~~~-~~~~i~~~~~sp~~~~l~~~~-~~~~i~l~d~~~~-   89 (148)
                      ..++|+++  +.++++.+.  +++|.++|++++  +.+..+.. ......++.+.  +..+.... .++.+.++|..+. 
T Consensus        24 ~Gl~~~~d--g~Lyvstg~~~~s~v~~iD~~tg--~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~   97 (266)
T 2iwa_A           24 QGLVYAEN--DTLFESTGLYGRSSVRQVALQTG--KVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLS   97 (266)
T ss_dssp             EEEEECST--TEEEEEECSTTTCEEEEEETTTC--CEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTE
T ss_pred             ccEEEeCC--CeEEEECCCCCCCEEEEEECCCC--CEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCc
Confidence            58888886  566666443  579999999998  77776642 12233345444  55554444 5789999999887 


Q ss_pred             ----cccc-ceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          90 ----FIQQ-VNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        90 ----~~~~-i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                          +... .....+++|++.++.+..++      +|.++|..+.+....+
T Consensus        98 v~~~i~~g~~~g~glt~Dg~~l~vs~gs~------~l~viD~~t~~v~~~I  142 (266)
T 2iwa_A           98 NIKNFTHQMKDGWGLATDGKILYGSDGTS------ILYEIDPHTFKLIKKH  142 (266)
T ss_dssp             EEEEEECCSSSCCEEEECSSSEEEECSSS------EEEEECTTTCCEEEEE
T ss_pred             EEEEEECCCCCeEEEEECCCEEEEECCCC------eEEEEECCCCcEEEEE
Confidence                2222 23345667888777765433      8999999876655444

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=97.95  E-value=0.00068  Score=46.21  Aligned_cols=104  Identities=7%  Similarity=-0.079  Sum_probs=75.4

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceE-EecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVI-NCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~-~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--   89 (148)
                      .+..++++++  +.+.++...++.|.+||.. +  +... ........+.++.+.++++.+++...++.+..+|....  
T Consensus        21 ~p~~i~~d~~--g~l~v~~~~~~~v~~~~~~-~--~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~g~~~   95 (300)
T 2qc5_A           21 GPYGITSSED--GKVWFTQHKANKISSLDQS-G--RIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKKGGFT   95 (300)
T ss_dssp             CEEEEEECTT--SCEEEEETTTTEEEEECTT-S--CEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEE
T ss_pred             CcceeeECCC--CCEEEEcCCCCeEEEECCC-C--ceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCCCCeE
Confidence            4567777777  7787775567899999988 5  3332 22333467899999999998877776788999998733  


Q ss_pred             -cc-----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          90 -FI-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        90 -~~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                       +.     ..+..+++.++++.+++...++      .|..+|..
T Consensus        96 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~------~i~~~~~~  133 (300)
T 2qc5_A           96 EYPLPQPDSGPYGITEGLNGDIWFTQLNGD------RIGKLTAD  133 (300)
T ss_dssp             EEECSSTTCCEEEEEECSTTCEEEEETTTT------EEEEECTT
T ss_pred             EecCCCCCCCCccceECCCCCEEEEccCCC------eEEEECCC
Confidence             21     5578899999998777765444      67777765

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=97.95  E-value=0.00045  Score=47.96  Aligned_cols=89  Identities=7%  Similarity=-0.090  Sum_probs=66.4

Q ss_pred             cEEEEEeCCCCcc-EEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062          14 QISTVFDSKHLVE-MVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~-~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---   89 (148)
                      ....+|+++  ++ ++++...++.+..|+.. +  + ...+..+...+.++.++++|+.+++...++.|..||....   
T Consensus        47 ~egp~~~~~--g~~l~~~d~~~~~i~~~~~~-g--~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~g~~~~  120 (305)
T 3dr2_A           47 SEGPAWWEA--QRTLVWSDLVGRRVLGWRED-G--T-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDADGQAHL  120 (305)
T ss_dssp             EEEEEEEGG--GTEEEEEETTTTEEEEEETT-S--C-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEE
T ss_pred             ccCCeEeCC--CCEEEEEECCCCEEEEEeCC-C--C-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCCCCEEE
Confidence            478899987  66 66776677899999984 4  3 3444445677899999999997766556678999988632   


Q ss_pred             cc--------ccceEEEEccCCCEEEE
Q psy7062          90 FI--------QQVNALRITPDKQLLAS  108 (148)
Q Consensus        90 ~~--------~~i~~~~~sp~~~~l~~  108 (148)
                      +.        ..+..++++|+|+.+++
T Consensus       121 ~~~~~~~~~~~~~~~i~~d~dG~l~~t  147 (305)
T 3dr2_A          121 LVGRYAGKRLNSPNDLIVARDGAIWFT  147 (305)
T ss_dssp             EECEETTEECSCCCCEEECTTSCEEEE
T ss_pred             EEeccCCCccCCCCCEEECCCCCEEEe
Confidence            11        34678999999998876

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=97.94  E-value=0.00066  Score=47.01  Aligned_cols=108  Identities=10%  Similarity=0.030  Sum_probs=69.1

Q ss_pred             cEEEEEeCCCCccEEEEEecC---------CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEE-EEEeCCCcEEE
Q psy7062          14 QISTVFDSKHLVEMVAALGGY---------QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWM-FTGGEDCRARI   83 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d---------~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l-~~~~~~~~i~l   83 (148)
                      ...++++++  |+++++....         ..-.+|.+...  ..+..+.........++|+|+++.+ ++.+.++.|..
T Consensus       100 ~~di~~d~d--G~l~~~~~~~~~~~~~~~~~~~~l~~~d~~--g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~  175 (297)
T 3g4e_A          100 FNDGKVDPA--GRYFAGTMAEETAPAVLERHQGALYSLFPD--HHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDA  175 (297)
T ss_dssp             EEEEEECTT--SCEEEEEEECCSBTTBCCTTCEEEEEECTT--SCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEE
T ss_pred             CCCEEECCC--CCEEEecCCcccccccccCCCcEEEEEECC--CCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEE
Confidence            355777776  7777663322         23455555432  1222232334557899999999866 45556789999


Q ss_pred             EECC--cc-------c---c---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          84 WDLS--LC-------F---I---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        84 ~d~~--~~-------~---~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                      ||+.  ++       +   .   ..+..++++++|+..++....+      .|..||..+.+.
T Consensus       176 ~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~------~v~~~d~~tG~~  232 (297)
T 3g4e_A          176 FDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGG------RVIRLDPVTGKR  232 (297)
T ss_dssp             EEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTT------EEEEECTTTCCE
T ss_pred             EeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCC------EEEEEcCCCceE
Confidence            9873  32       1   1   3567889999998777766544      789998875543

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=97.92  E-value=0.0009  Score=48.22  Aligned_cols=102  Identities=9%  Similarity=0.024  Sum_probs=68.2

Q ss_pred             cEEEEEecCCeEEEEeCCCCCCCceEEecC----------CCCCEEEEEEccCCCEEEEEeC----------CCcEEEEE
Q psy7062          26 EMVAALGGYQHIRMYDFGSNNPNPVINCEG----------VSKNVVEVGFQEDGKWMFTGGE----------DCRARIWD   85 (148)
Q Consensus        26 ~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~----------~~~~i~~~~~sp~~~~l~~~~~----------~~~i~l~d   85 (148)
                      .++++ +.++.+.+.|+.......+..+..          .......+.++|+++.++....          .+.|.++|
T Consensus       226 ~~~~~-~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID  304 (373)
T 2mad_H          226 RIVWP-VYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVT  304 (373)
T ss_pred             EEEEE-cCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEE
Confidence            44444 456788888886542122222211          1223445788999887766542          35799999


Q ss_pred             CCcc-----cc--ccceEEEEccCCC-EEEEEe-cCCceecCeeEEEeecCCCcceec
Q psy7062          86 LSLC-----FI--QQVNALRITPDKQ-LLASAE-ELSCCYCGAAVFVYNSCYPAAVVA  134 (148)
Q Consensus        86 ~~~~-----~~--~~i~~~~~sp~~~-~l~~~~-~d~~~~~~~~i~~~d~~~~~~~~~  134 (148)
                      ..+.     +.  .....+.|+||++ .++++. .++      .|.+||..+.+....
T Consensus       305 ~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~------~V~ViD~~t~~vv~~  356 (373)
T 2mad_H          305 GLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTE------VLHIYDAGAGDQDQS  356 (373)
T ss_pred             CCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCCC------eEEEEECCCCCEEee
Confidence            9887     22  6689999999999 677766 344      899999998877665

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=97.88  E-value=0.00049  Score=47.32  Aligned_cols=109  Identities=13%  Similarity=0.089  Sum_probs=70.9

Q ss_pred             EEEEEeCCCCccEEEEEecCC--eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEe-CCCcEEEEECCcc--
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQ--HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGG-EDCRARIWDLSLC--   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~--~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-~~~~i~l~d~~~~--   89 (148)
                      ..+.|+ +  +.++.+.+.++  .|+.+|++++  +.+..... ........+.+++..+.... .++.+.++|..+.  
T Consensus        46 qGL~~~-~--~~LyestG~~g~S~v~~vD~~Tg--kv~~~~~l-~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~  119 (262)
T 3nol_A           46 EGFFYR-N--GYFYESTGLNGRSSIRKVDIESG--KTLQQIEL-GKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQ  119 (262)
T ss_dssp             EEEEEE-T--TEEEEEEEETTEEEEEEECTTTC--CEEEEEEC-CTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCE
T ss_pred             ceEEEE-C--CEEEEECCCCCCceEEEEECCCC--cEEEEEec-CCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcE
Confidence            456666 4  56777767665  8999999999  77777653 33444444455565555555 4789999999887  


Q ss_pred             ---ccccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          90 ---FIQQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        90 ---~~~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                         +........++++++.|+.+...+      +|.++|..+.+....+
T Consensus       120 ~~ti~~~~eG~glt~dg~~L~~SdGs~------~i~~iDp~T~~v~~~I  162 (262)
T 3nol_A          120 VRSFNYDGEGWGLTHNDQYLIMSDGTP------VLRFLDPESLTPVRTI  162 (262)
T ss_dssp             EEEEECSSCCCCEEECSSCEEECCSSS------EEEEECTTTCSEEEEE
T ss_pred             EEEEECCCCceEEecCCCEEEEECCCC------eEEEEcCCCCeEEEEE
Confidence               331112233345788777776534      8999998876654443

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=97.87  E-value=0.0011  Score=45.07  Aligned_cols=102  Identities=9%  Similarity=-0.015  Sum_probs=72.2

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCce-EEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPV-INCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~-~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---   89 (148)
                      +..++++++  +.+.++...++.|..||.+ +  +.. .........+.++++.++|+.+++...++.+..+|....   
T Consensus        64 ~~~i~~~~~--g~l~v~~~~~~~v~~~d~~-g--~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~  138 (300)
T 2qc5_A           64 VMCLIVSSL--GDIWFTENGANKIGKLSKK-G--GFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTADGTIYE  138 (300)
T ss_dssp             EEEEEECTT--SCEEEEETTTTEEEEECTT-S--CEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTTSCEEE
T ss_pred             ceeEEECCC--CCEEEEecCCCeEEEECCC-C--CeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCCCCEEE
Confidence            456666765  7777774557889999988 4  332 222223467899999999998887777888999988733   


Q ss_pred             c--c---ccceEEEEccCCCEEEEEecCCceecCeeEEEeec
Q psy7062          90 F--I---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNS  126 (148)
Q Consensus        90 ~--~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~  126 (148)
                      +  .   ..+..++++++++.+++...++      .|..+|.
T Consensus       139 ~~~~~~~~~~~~i~~d~~g~l~v~~~~~~------~i~~~~~  174 (300)
T 2qc5_A          139 YDLPNKGSYPAFITLGSDNALWFTENQNN------SIGRITN  174 (300)
T ss_dssp             EECSSTTCCEEEEEECTTSSEEEEETTTT------EEEEECT
T ss_pred             ccCCCCCCCceeEEECCCCCEEEEecCCC------eEEEECC
Confidence            2  1   5578899999999666554444      6777776

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=97.82  E-value=0.00096  Score=48.63  Aligned_cols=100  Identities=9%  Similarity=-0.004  Sum_probs=71.0

Q ss_pred             EEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCC---------------CCCEEEEEEccCCCEEEEEe-CCC
Q psy7062          16 STVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGV---------------SKNVVEVGFQEDGKWMFTGG-EDC   79 (148)
Q Consensus        16 ~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~---------------~~~i~~~~~sp~~~~l~~~~-~~~   79 (148)
                      .++|+++. +.++++-...+.|..|+.+..    +..+.++               -....+++++|+|+++++-. .++
T Consensus       271 ~ia~~p~~-g~lyv~d~~~~~I~~~~~~g~----~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~  345 (409)
T 3hrp_A          271 YLIYYFVD-SNFYMSDQNLSSVYKITPDGE----CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGY  345 (409)
T ss_dssp             EEEEETTT-TEEEEEETTTTEEEEECTTCC----EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTC
T ss_pred             cEEEeCCC-CEEEEEeCCCCEEEEEecCCC----EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCC
Confidence            88899853 667777566789999998753    2222222               14588999999999777777 789


Q ss_pred             cEEEEECCcc----cc------------------ccceEEEEccCCCEEEEEecCCceecCeeEEEeec
Q psy7062          80 RARIWDLSLC----FI------------------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNS  126 (148)
Q Consensus        80 ~i~l~d~~~~----~~------------------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~  126 (148)
                      .|+.||+..+    +.                  .....++++|++.++++-..+.      +|+.+++
T Consensus       346 ~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~------~Ir~i~~  408 (409)
T 3hrp_A          346 CLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGK------AIRKYAV  408 (409)
T ss_dssp             EEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTC------EEEEEEE
T ss_pred             EEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCC------eEEEEEe
Confidence            9999997655    11                  2477899999977666655544      7777664

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=97.79  E-value=0.00089  Score=49.59  Aligned_cols=104  Identities=13%  Similarity=0.065  Sum_probs=70.9

Q ss_pred             EEEeCCCCccEEEEEe-------------------cCCeEEEEeCCCCCCCceEEecCC--CCCEEEEEE--ccCCCEEE
Q psy7062          17 TVFDSKHLVEMVAALG-------------------GYQHIRMYDFGSNNPNPVINCEGV--SKNVVEVGF--QEDGKWMF   73 (148)
Q Consensus        17 ~~~~~~~~~~~l~~~~-------------------~d~~v~~~d~~~~~~~~~~~~~~~--~~~i~~~~~--sp~~~~l~   73 (148)
                      +.|+|+  ++.+++..                   ..++|.+||+.++  +.+.++..-  ......+.|  +|++++++
T Consensus       193 ~~~~p~--~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~--k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aY  268 (462)
T 2ece_A          193 FWWNLP--NEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR--KRIHSLTLGEENRMALELRPLHDPTKLMGF  268 (462)
T ss_dssp             EEEETT--TTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT--EEEEEEESCTTEEEEEEEEECSSTTCCEEE
T ss_pred             EEECCC--CCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCC--cEeeEEecCCCCCccceeEeeECCCCCEEE
Confidence            556777  66777732                   2679999999987  667776542  134455555  99999887


Q ss_pred             EEe------CCCcEEEEECCcc------------------c----------cccceEEEEccCCCEEEEEecCCceecCe
Q psy7062          74 TGG------EDCRARIWDLSLC------------------F----------IQQVNALRITPDKQLLASAEELSCCYCGA  119 (148)
Q Consensus        74 ~~~------~~~~i~l~d~~~~------------------~----------~~~i~~~~~sp~~~~l~~~~~d~~~~~~~  119 (148)
                      .++      .+++|.+|....+                  +          ......+.+|||+++|.+++..     .+
T Consensus       269 V~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg-----~d  343 (462)
T 2ece_A          269 INMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWG-----IG  343 (462)
T ss_dssp             EEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETT-----TT
T ss_pred             EEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCC-----CC
Confidence            766      4567765443222                  0          0236778999999999998873     44


Q ss_pred             eEEEeecCCC
Q psy7062         120 AVFVYNSCYP  129 (148)
Q Consensus       120 ~i~~~d~~~~  129 (148)
                      .|.+||+..+
T Consensus       344 ~VavfdV~d~  353 (462)
T 2ece_A          344 EVRQYDISNP  353 (462)
T ss_dssp             EEEEEECSST
T ss_pred             EEEEEEecCC
Confidence            7999998643

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=97.78  E-value=0.00051  Score=47.34  Aligned_cols=106  Identities=16%  Similarity=0.061  Sum_probs=69.4

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEE-EeCCCcEEEEECCcc----
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFT-GGEDCRARIWDLSLC----   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~-~~~~~~i~l~d~~~~----   89 (148)
                      ..+.|+.   +.++.+.+.++.|+.+|++++  +.+... . ........+.+++..+.. .-.++.+.+||..+.    
T Consensus        58 qGL~~~~---~~Ly~stG~~g~v~~iD~~Tg--kv~~~~-l-~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~  130 (268)
T 3nok_A           58 QGLVFHQ---GHFFESTGHQGTLRQLSLESA--QPVWME-R-LGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRER  130 (268)
T ss_dssp             EEEEEET---TEEEEEETTTTEEEECCSSCS--SCSEEE-E-CTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEE
T ss_pred             ceEEEEC---CEEEEEcCCCCEEEEEECCCC--cEEeEE-C-CCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEE
Confidence            3566663   567777788889999999998  666665 2 233333333444444433 345789999999987    


Q ss_pred             -cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          90 -FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        90 -~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                       +.  ..-+.++  ++++.|+.+..++      +|.++|..+.+....+
T Consensus       131 ti~~~~eGwGLt--~Dg~~L~vSdGs~------~l~~iDp~T~~v~~~I  171 (268)
T 3nok_A          131 TTRYSGEGWGLC--YWNGKLVRSDGGT------MLTFHEPDGFALVGAV  171 (268)
T ss_dssp             EEECSSCCCCEE--EETTEEEEECSSS------EEEEECTTTCCEEEEE
T ss_pred             EEeCCCceeEEe--cCCCEEEEECCCC------EEEEEcCCCCeEEEEE
Confidence             33  2234444  5788887776544      8999998877655444

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=97.74  E-value=8.6e-06  Score=58.62  Aligned_cols=61  Identities=5%  Similarity=-0.104  Sum_probs=40.6

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC   89 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~   89 (148)
                      +..+++++.|+.+..||.+++  +.+..+..  ..+.+..+..++..+++++.|+.++.||..++
T Consensus         9 ~~~v~~gs~dg~v~a~d~~tG--~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG   69 (369)
T 2hz6_A            9 ETLLFVSTLDGSLHAVSKRTG--SIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNN   69 (369)
T ss_dssp             TTEEEEEETTSEEEEEETTTC--CEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----
T ss_pred             CCEEEEEcCCCEEEEEECCCC--CEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCC
Confidence            677888899999999999998  77777764  34444445567777788889999999999766

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=97.73  E-value=0.0013  Score=46.53  Aligned_cols=104  Identities=12%  Similarity=0.075  Sum_probs=69.8

Q ss_pred             EEEEEeCCCCccEEEEEe---cCCeEEEEeCCCCCCCceEEecCCC-----------------------------CCEEE
Q psy7062          15 ISTVFDSKHLVEMVAALG---GYQHIRMYDFGSNNPNPVINCEGVS-----------------------------KNVVE   62 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~---~d~~v~~~d~~~~~~~~~~~~~~~~-----------------------------~~i~~   62 (148)
                      ..++++++. +.++++..   .++.|.+||+.++  +..+.+.+|.                             ..+..
T Consensus       123 ~~v~vd~~~-g~~yvtd~~~~~~~~i~v~d~~~g--~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~g  199 (343)
T 2qe8_A          123 NDLAVDLIH-NFVYISDPAPDDKAALIRVDLQTG--LAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNG  199 (343)
T ss_dssp             CEEEEETTT-TEEEEEECCSGGGCEEEEEETTTC--CEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEE
T ss_pred             ceEEEecCC-CEEEEEcCccCCCCeEEEEECCCC--CEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccce
Confidence            677888752 45556544   5789999999876  4444443321                             23688


Q ss_pred             EEEccCCCEEEEEeCCC-cEEEEECC---cc----------cc-----ccceEEEEccCCCEEEEEecCCceecCeeEEE
Q psy7062          63 VGFQEDGKWMFTGGEDC-RARIWDLS---LC----------FI-----QQVNALRITPDKQLLASAEELSCCYCGAAVFV  123 (148)
Q Consensus        63 ~~~sp~~~~l~~~~~~~-~i~l~d~~---~~----------~~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~  123 (148)
                      ++++|+++.++.+...+ .+..++..   ..          +.     .....++++++|..+++...++      .|..
T Consensus       200 ia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~------~V~~  273 (343)
T 2qe8_A          200 IVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHS------AIGV  273 (343)
T ss_dssp             EEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGT------EEEE
T ss_pred             eEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCC------eEEE
Confidence            99999999888877665 55555432   10          11     2456789999998877776655      8999


Q ss_pred             eecC
Q psy7062         124 YNSC  127 (148)
Q Consensus       124 ~d~~  127 (148)
                      ||..
T Consensus       274 ~d~~  277 (343)
T 2qe8_A          274 ITSA  277 (343)
T ss_dssp             EETT
T ss_pred             EECC
Confidence            9983

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=97.73  E-value=0.0023  Score=43.52  Aligned_cols=108  Identities=13%  Similarity=0.087  Sum_probs=69.3

Q ss_pred             EEEEEeCCCCccEEEEEecC--CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEE-EeCCCcEEEEECCcc--
Q psy7062          15 ISTVFDSKHLVEMVAALGGY--QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFT-GGEDCRARIWDLSLC--   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d--~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~-~~~~~~i~l~d~~~~--   89 (148)
                      ..+.|+.   +.++.+.+.+  +.|+.+|++++  +.+..... ........+.+++..+.. .-.++.+.++|..+.  
T Consensus        24 qGL~~~~---~~LyestG~~g~S~v~~vD~~tg--kv~~~~~l-~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~   97 (243)
T 3mbr_X           24 EGLFYLR---GHLYESTGETGRSSVRKVDLETG--RILQRAEV-PPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTP   97 (243)
T ss_dssp             EEEEEET---TEEEEEECCTTSCEEEEEETTTC--CEEEEEEC-CTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEE
T ss_pred             ccEEEEC---CEEEEECCCCCCceEEEEECCCC--CEEEEEeC-CCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcE
Confidence            3667765   4566665654  48999999999  77776653 223333333444554444 445789999999887  


Q ss_pred             ---cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062          90 ---FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN  136 (148)
Q Consensus        90 ---~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~  136 (148)
                         +.  ..-+.+  +++++.|+.+..++      +|.++|..+.+....++
T Consensus        98 ~~ti~~~~~Gwgl--t~dg~~L~vSdgs~------~l~~iDp~t~~~~~~I~  141 (243)
T 3mbr_X           98 RARFRYPGEGWAL--TSDDSHLYMSDGTA------VIRKLDPDTLQQVGSIK  141 (243)
T ss_dssp             EEEEECSSCCCEE--EECSSCEEEECSSS------EEEEECTTTCCEEEEEE
T ss_pred             EEEEeCCCCceEE--eeCCCEEEEECCCC------eEEEEeCCCCeEEEEEE
Confidence               33  323444  45777777776544      89999998876654443

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=97.64  E-value=1.8e-05  Score=56.98  Aligned_cols=96  Identities=7%  Similarity=-0.057  Sum_probs=50.3

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc-ccceEEE
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI-QQVNALR   98 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~-~~i~~~~   98 (148)
                      +..+++++.++.+..||.+++  +.+..+..+.    ...++|++..+++++.++.++.||.+++     +. .......
T Consensus        92 ~~~v~~g~~dg~v~a~D~~tG--~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~~~~~~  165 (369)
T 2hz6_A           92 DGILYMGKKQDIWYVIDLLTG--EKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFDYAASL  165 (369)
T ss_dssp             ---CCCCEEEEEEEEECCC----------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEEECCBC
T ss_pred             CCEEEEEeCCCEEEEEECCCC--cEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEecccccCcc
Confidence            456677788899999999998  7776665443    2345778888999999999999999887     11 1111222


Q ss_pred             EccCC---CEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062          99 ITPDK---QLLASAEELSCCYCGAAVFVYNSCYPAAV  132 (148)
Q Consensus        99 ~sp~~---~~l~~~~~d~~~~~~~~i~~~d~~~~~~~  132 (148)
                      ++++.   ..++.++.++      .++.||..+.+..
T Consensus       166 ~~~~~~~~~~v~~~~~dg------~v~a~d~~tG~~~  196 (369)
T 2hz6_A          166 PEDDVDYKMSHFVSNGDG------LVVTVDSESGDVL  196 (369)
T ss_dssp             CCCCTTCCCCEEEEETSC------EEEEECTTTCCEE
T ss_pred             ccCCccccceEEEECCCC------EEEEEECCCCcEE
Confidence            22321   4566777777      7888888766543

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=97.60  E-value=0.00081  Score=49.50  Aligned_cols=67  Identities=6%  Similarity=0.208  Sum_probs=52.8

Q ss_pred             EEEccCCCEEEEEeC----------CCcEEEEECCcc-----cc--ccceEEEEccCCC-EEEEEec-CCceecCeeEEE
Q psy7062          63 VGFQEDGKWMFTGGE----------DCRARIWDLSLC-----FI--QQVNALRITPDKQ-LLASAEE-LSCCYCGAAVFV  123 (148)
Q Consensus        63 ~~~sp~~~~l~~~~~----------~~~i~l~d~~~~-----~~--~~i~~~~~sp~~~-~l~~~~~-d~~~~~~~~i~~  123 (148)
                      ++++|+++.++....          ++.+.++|..+.     +.  ...+.+.|+||++ .++++.. ++      .|.+
T Consensus       324 va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s~------~VsV  397 (426)
T 3c75_H          324 TAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQDAEPLLYALSAGTQ------TLHI  397 (426)
T ss_dssp             EEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTT------EEEE
T ss_pred             eEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEEccCCCEEEEEEcCCCC------eEEE
Confidence            688999886665532          357999999887     32  5689999999999 8888874 45      8999


Q ss_pred             eecCCCcceecc
Q psy7062         124 YNSCYPAAVVAS  135 (148)
Q Consensus       124 ~d~~~~~~~~~~  135 (148)
                      +|..+.+.+..+
T Consensus       398 ID~~t~kvv~tI  409 (426)
T 3c75_H          398 YDAATGEELRSV  409 (426)
T ss_dssp             EETTTCCEEEEE
T ss_pred             EECCCCCEEEEe
Confidence            999988877664

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=97.56  E-value=0.0043  Score=43.83  Aligned_cols=98  Identities=11%  Similarity=-0.032  Sum_probs=67.5

Q ss_pred             cCcEEEEEeCCCCccEEEEEec-----CCeEEEEeCCCCCCCceEEecC------CCCCEEEEEEccCCC-EEEEEe---
Q psy7062          12 FGQISTVFDSKHLVEMVAALGG-----YQHIRMYDFGSNNPNPVINCEG------VSKNVVEVGFQEDGK-WMFTGG---   76 (148)
Q Consensus        12 ~~~~~~~~~~~~~~~~l~~~~~-----d~~v~~~d~~~~~~~~~~~~~~------~~~~i~~~~~sp~~~-~l~~~~---   76 (148)
                      ..+..++++++  ++++++-..     +..|.+||++++  +.+..+..      +...+..++++|++. .+++..   
T Consensus        67 ~~p~gv~~d~~--g~L~v~D~g~~~~~~~~i~~~d~~tg--~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~  142 (343)
T 2qe8_A           67 DTVLGIKSDGN--GIVWMLDNGNQSKSVPKLVAWDTLNN--QLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD  142 (343)
T ss_dssp             SCEEEEEECSS--SEEEEEECHHHHTSCCEEEEEETTTT--EEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG
T ss_pred             eEeeEEEEcCC--CcEEEEcCCCCcCCCCeEEEEECCCC--eEEEEEECChhhcccccccceEEEecCCCEEEEEcCccC
Confidence            34678888887  777776433     478999999987  55555432      224568899998654 445554   


Q ss_pred             CCCcEEEEECCcc-----ccc--------------------------------cceEEEEccCCCEEEEEecCC
Q psy7062          77 EDCRARIWDLSLC-----FIQ--------------------------------QVNALRITPDKQLLASAEELS  113 (148)
Q Consensus        77 ~~~~i~l~d~~~~-----~~~--------------------------------~i~~~~~sp~~~~l~~~~~d~  113 (148)
                      .++.+.+||+.++     +..                                .+..++|+|+++.|..+..++
T Consensus       143 ~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~  216 (343)
T 2qe8_A          143 DKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHS  216 (343)
T ss_dssp             GGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSC
T ss_pred             CCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCC
Confidence            5789999998754     100                                146789999999888877644

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=97.56  E-value=0.0053  Score=43.09  Aligned_cols=96  Identities=10%  Similarity=0.057  Sum_probs=64.3

Q ss_pred             cEEEEEeCCCCccEE-EEEecCCeEEEEeCC--CC-CCC---ceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEEC
Q psy7062          14 QISTVFDSKHLVEMV-AALGGYQHIRMYDFG--SN-NPN---PVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL   86 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l-~~~~~d~~v~~~d~~--~~-~~~---~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~   86 (148)
                      ...++|+++  ++.+ ++.+.++.|.+||++  ++ ...   ....+......+.++.+.++|++.++...++.|..||.
T Consensus       181 ~~~i~~s~d--g~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~  258 (326)
T 2ghs_A          181 PNSICFSPD--GTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT  258 (326)
T ss_dssp             EEEEEECTT--SCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT
T ss_pred             cCCeEEcCC--CCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC
Confidence            457788887  6544 443456789999986  33 111   12223333456788999999997777766788999998


Q ss_pred             Ccc----cc---ccceEEEEc-cCCCEEEEEec
Q psy7062          87 SLC----FI---QQVNALRIT-PDKQLLASAEE  111 (148)
Q Consensus        87 ~~~----~~---~~i~~~~~s-p~~~~l~~~~~  111 (148)
                      ...    +.   ..+.+++|+ |+++.|+.++.
T Consensus       259 ~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~  291 (326)
T 2ghs_A          259 DGNHIARYEVPGKQTTCPAFIGPDASRLLVTSA  291 (326)
T ss_dssp             TCCEEEEEECSCSBEEEEEEESTTSCEEEEEEB
T ss_pred             CCCEEEEEECCCCCcEEEEEecCCCCEEEEEec
Confidence            543    22   468899998 88876655554

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=97.55  E-value=0.0028  Score=49.77  Aligned_cols=106  Identities=10%  Similarity=-0.001  Sum_probs=68.2

Q ss_pred             EEEEEe-CCCCccEEEEEec-CC----eEEEEeCCCC-CCCceEEecCCCCCEEEEEEccCCCEEEEEeCC-----CcEE
Q psy7062          15 ISTVFD-SKHLVEMVAALGG-YQ----HIRMYDFGSN-NPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED-----CRAR   82 (148)
Q Consensus        15 ~~~~~~-~~~~~~~l~~~~~-d~----~v~~~d~~~~-~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~-----~~i~   82 (148)
                      ...+|+ |+  |++|+.... +|    +|.++|+.++ . .....+.   .....+.|+|||+.++....+     ..|+
T Consensus       177 ~~~~~S~PD--G~~lAy~~~~~G~~~~~l~v~dl~~g~~-~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~  250 (751)
T 2xe4_A          177 MEVKPAPPE--HDLVAFSVDMSGNEVYTIEFKRISDPSQ-TIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVW  250 (751)
T ss_dssp             EEEEECTTT--TCEEEEEEESSSSSCEEEEEEETTCTTC-CCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEE
T ss_pred             eeeEecCCC--CCEEEEEEeCCCCceEEEEEEECCCCCE-eCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEE
Confidence            456777 76  777765333 22    5999999876 3 1111111   113467899999977766654     3577


Q ss_pred             EEECCcc-------cc----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          83 IWDLSLC-------FI----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        83 l~d~~~~-------~~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                      .+++.+.       +.    .....+.|+|||++|+..+...   ....|+++|+.++
T Consensus       251 ~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~---~~~~l~~~d~~~~  305 (751)
T 2xe4_A          251 RHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSP---ETAEVHLLDLRKG  305 (751)
T ss_dssp             EEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECS---SCEEEEEEESSSC
T ss_pred             EEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCC---CCceEEEEECCCC
Confidence            8888654       21    2345678999999888776443   3457889998765

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=97.54  E-value=0.0081  Score=40.69  Aligned_cols=108  Identities=6%  Similarity=-0.077  Sum_probs=70.5

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeC---CCcEEEEECCcc
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE---DCRARIWDLSLC   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~---~~~i~l~d~~~~   89 (148)
                      .+..+++++.. +.++++-...+.|.+++.+..  ...............++++|++..++.+..   .+.|..+++...
T Consensus        80 ~p~~ia~d~~~-~~lyv~d~~~~~I~~~~~~g~--~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~  156 (267)
T 1npe_A           80 SPEGIALDHLG-RTIFWTDSQLDRIEVAKMDGT--QRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT  156 (267)
T ss_dssp             CEEEEEEETTT-TEEEEEETTTTEEEEEETTSC--SCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC
T ss_pred             CccEEEEEecC-CeEEEEECCCCEEEEEEcCCC--CEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC
Confidence            46788888862 455555455678999999764  222222222356789999997665555443   367888887543


Q ss_pred             ----cc----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062          90 ----FI----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        90 ----~~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                          +.    .....++++|++..|..+...     ..+|..+|...
T Consensus       157 ~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~-----~~~I~~~~~~g  198 (267)
T 1npe_A          157 NRRILAQDNLGLPNGLTFDAFSSQLCWVDAG-----THRAECLNPAQ  198 (267)
T ss_dssp             CCEEEECTTCSCEEEEEEETTTTEEEEEETT-----TTEEEEEETTE
T ss_pred             CcEEEEECCCCCCcEEEEcCCCCEEEEEECC-----CCEEEEEecCC
Confidence                21    457889999988777666542     23788888763

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=97.54  E-value=0.0026  Score=49.64  Aligned_cols=108  Identities=6%  Similarity=0.020  Sum_probs=67.5

Q ss_pred             EEEEeCCCCccEEEEEecCC--------------eEEEEeCCCCCCCceEEec--CCCCCEEEEEEccCCCEEEEEeCC-
Q psy7062          16 STVFDSKHLVEMVAALGGYQ--------------HIRMYDFGSNNPNPVINCE--GVSKNVVEVGFQEDGKWMFTGGED-   78 (148)
Q Consensus        16 ~~~~~~~~~~~~l~~~~~d~--------------~v~~~d~~~~~~~~~~~~~--~~~~~i~~~~~sp~~~~l~~~~~~-   78 (148)
                      .++|+++  ..++++ +.+.              .|.+|++.++..+....+.  .+...+..+.|+|||++++..+.+ 
T Consensus       213 ~~~wspD--~~l~~~-~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~  289 (741)
T 1yr2_A          213 GLAWLGN--DALLYS-RFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEG  289 (741)
T ss_dssp             CCEESTT--SEEEEE-ECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECT
T ss_pred             cEEEECC--CEEEEE-EecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEcc
Confidence            5667776  344444 4443              3889999876211222332  233468899999999988776654 


Q ss_pred             ----CcEEEEECCcc-------cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          79 ----CRARIWDLSLC-------FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        79 ----~~i~l~d~~~~-------~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                          ..+++||+.++       +.   ...... ++|+++.|+..+.++  .....|.+||+..+
T Consensus       290 ~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~--~~~~~l~~~d~~~~  351 (741)
T 1yr2_A          290 TDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDG--APLKKIVRVDLSGS  351 (741)
T ss_dssp             TCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTT--CTTCEEEEEECSSS
T ss_pred             CCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCC--CCCCEEEEEeCCCC
Confidence                38999998532       22   233333 458888777776543  12347999998764

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=97.44  E-value=0.0058  Score=47.39  Aligned_cols=109  Identities=11%  Similarity=0.063  Sum_probs=66.8

Q ss_pred             EEEEEeCCCCccEEEEEecCC-------------eEEEEeCCCCCCCceEEe--cC-CCCCEEEEEEccCCCEEEEEeC-
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQ-------------HIRMYDFGSNNPNPVINC--EG-VSKNVVEVGFQEDGKWMFTGGE-   77 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~-------------~v~~~d~~~~~~~~~~~~--~~-~~~~i~~~~~sp~~~~l~~~~~-   77 (148)
                      ..++|+ +  ++.|+..+.+.             .|.+|++.+...+....+  .. |......+.++|||++++.... 
T Consensus       178 ~~~~Ws-D--g~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~  254 (693)
T 3iuj_A          178 SGISWL-G--NEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAAN  254 (693)
T ss_dssp             CCCEEE-T--TTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEES
T ss_pred             ccEEEe-C--CCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEcc
Confidence            345677 6  66666656653             499999987622222333  23 4456788999999998754332 


Q ss_pred             ---CCcEEEEECCcc------cc---ccceEEEEccCCCEE-EEEecCCceecCeeEEEeecCCCc
Q psy7062          78 ---DCRARIWDLSLC------FI---QQVNALRITPDKQLL-ASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        78 ---~~~i~l~d~~~~------~~---~~i~~~~~sp~~~~l-~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                         ...++++|+.++      +.   ...... |++++..| +.+..++   ...+|..+|+..+.
T Consensus       255 ~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~---~~~~l~~~d~~~~~  316 (693)
T 3iuj_A          255 STSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDA---PNRRLVTVDAANPG  316 (693)
T ss_dssp             SSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTC---TTCEEEEEETTSCC
T ss_pred             CCCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCC---CCCEEEEEeCCCCC
Confidence               358999998654      22   223333 66665544 4444432   24579999987654

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=97.44  E-value=0.0034  Score=43.46  Aligned_cols=95  Identities=6%  Similarity=-0.070  Sum_probs=62.1

Q ss_pred             CcEEEEEeCCCCccEEEEEecC------CeEEEEeCCCCCCCc--eEEe-cCCCCCEEEEEEccCCCEEEEEeCCCcEEE
Q psy7062          13 GQISTVFDSKHLVEMVAALGGY------QHIRMYDFGSNNPNP--VINC-EGVSKNVVEVGFQEDGKWMFTGGEDCRARI   83 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d------~~v~~~d~~~~~~~~--~~~~-~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l   83 (148)
                      .+..++|+++  ++.|+.+...      +.|.+|++...  ..  ...+ ........++.+.++|++.++. .+ .|.+
T Consensus       189 ~p~gl~~spd--g~~lyv~~~~~~~~~~~~i~~~~~~~~--~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~-~~-gv~~  262 (305)
T 3dr2_A          189 HPNGLAFSPD--EQTLYVSQTPEQGHGSVEITAFAWRDG--ALHDRRHFASVPDGLPDGFCVDRGGWLWSSS-GT-GVCV  262 (305)
T ss_dssp             SEEEEEECTT--SSEEEEEECCC---CCCEEEEEEEETT--EEEEEEEEECCSSSCCCSEEECTTSCEEECC-SS-EEEE
T ss_pred             CCcceEEcCC--CCEEEEEecCCcCCCCCEEEEEEecCC--CccCCeEEEECCCCCCCeEEECCCCCEEEec-CC-cEEE
Confidence            3467788888  6655554544      68999998764  21  1111 1123345578899999955444 44 5999


Q ss_pred             EECCcc----cc--ccceEEEEccCCCEEEEEecCC
Q psy7062          84 WDLSLC----FI--QQVNALRITPDKQLLASAEELS  113 (148)
Q Consensus        84 ~d~~~~----~~--~~i~~~~~sp~~~~l~~~~~d~  113 (148)
                      ||....    +.  ..+.+++|+|+++.|..++.++
T Consensus       263 ~~~~g~~~~~~~~~~~~~~~~f~~d~~~L~it~~~~  298 (305)
T 3dr2_A          263 FDSDGQLLGHIPTPGTASNCTFDQAQQRLFITGGPC  298 (305)
T ss_dssp             ECTTSCEEEEEECSSCCCEEEECTTSCEEEEEETTE
T ss_pred             ECCCCCEEEEEECCCceeEEEEeCCCCEEEEEcCCe
Confidence            998654    22  5688899999988887777543

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=97.43  E-value=0.0015  Score=49.86  Aligned_cols=85  Identities=11%  Similarity=-0.062  Sum_probs=58.2

Q ss_pred             eEEEEeCCCCCCCc-eEEecCCCCCEEEEEEccCCCEEEEEe-CCCcEEEEECCcc-----------------cc--ccc
Q psy7062          36 HIRMYDFGSNNPNP-VINCEGVSKNVVEVGFQEDGKWMFTGG-EDCRARIWDLSLC-----------------FI--QQV   94 (148)
Q Consensus        36 ~v~~~d~~~~~~~~-~~~~~~~~~~i~~~~~sp~~~~l~~~~-~~~~i~l~d~~~~-----------------~~--~~i   94 (148)
                      .|.+.|..+...+. +..+.. ....-++.++|||++++.++ .+.++.++|+.+.                 ..  ...
T Consensus       255 ~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP  333 (595)
T 1fwx_A          255 GVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGP  333 (595)
T ss_dssp             TEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCE
T ss_pred             cEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCc
Confidence            37777777621133 444432 23445789999999887665 4689999999843                 11  678


Q ss_pred             eEEEEccCCCEEEEE-ecCCceecCeeEEEeecCC
Q psy7062          95 NALRITPDKQLLASA-EELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        95 ~~~~~sp~~~~l~~~-~~d~~~~~~~~i~~~d~~~  128 (148)
                      +.++|+|+| .+.+. .-|+      +|.+||+..
T Consensus       334 ~h~aF~~dG-~aY~t~~lds------qV~kwdi~~  361 (595)
T 1fwx_A          334 LHTAFDGRG-NAYTSLFLDS------QVVKWNIED  361 (595)
T ss_dssp             EEEEECTTS-EEEEEETTTT------EEEEEEHHH
T ss_pred             ceEEECCCC-eEEEEEecCC------cEEEEEhhH
Confidence            999999999 44444 4444      899999875

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=97.38  E-value=0.0021  Score=49.95  Aligned_cols=102  Identities=9%  Similarity=0.070  Sum_probs=72.8

Q ss_pred             cEEEEEecCCeEEEEeCCCCCCCceEEecCCC-C---------C-E------------------------EEEEEccCCC
Q psy7062          26 EMVAALGGYQHIRMYDFGSNNPNPVINCEGVS-K---------N-V------------------------VEVGFQEDGK   70 (148)
Q Consensus        26 ~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~-~---------~-i------------------------~~~~~sp~~~   70 (148)
                      ..++.++.++.+.++|.+++  +.+....... .         . +                        ..++++|++.
T Consensus       328 ~~l~~~~~~G~l~~lD~~tG--~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~  405 (677)
T 1kb0_A          328 KVILHAPKNGFFFVLDRTNG--KFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTG  405 (677)
T ss_dssp             EEEEECCTTSEEEEEETTTC--CEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTT
T ss_pred             eEEEEECCCCEEEEEECCCC--CEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCC
Confidence            67788889999999999998  6665543211 0         1 0                        1468889888


Q ss_pred             EEEEEeC-------------------------------------------CCcEEEEECCcc-----cc--ccceEEEEc
Q psy7062          71 WMFTGGE-------------------------------------------DCRARIWDLSLC-----FI--QQVNALRIT  100 (148)
Q Consensus        71 ~l~~~~~-------------------------------------------~~~i~l~d~~~~-----~~--~~i~~~~~s  100 (148)
                      .+++...                                           .+.+..||+.++     +.  .+.+...++
T Consensus       406 ~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~  485 (677)
T 1kb0_A          406 LVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLT  485 (677)
T ss_dssp             EEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEE
T ss_pred             EEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceE
Confidence            7766532                                           167999999887     22  445556677


Q ss_pred             cCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062         101 PDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus       101 p~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                      ..+..++.++.|+      .++.||..+.+.+...
T Consensus       486 ~~g~~v~~g~~dg------~l~a~D~~tG~~lw~~  514 (677)
T 1kb0_A          486 TAGNVVFQGTADG------RLVAYHAATGEKLWEA  514 (677)
T ss_dssp             ETTTEEEEECTTS------EEEEEETTTCCEEEEE
T ss_pred             eCCCEEEEECCCC------cEEEEECCCCceeeee
Confidence            7788888888877      8999999887765544

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=97.33  E-value=0.0032  Score=45.45  Aligned_cols=74  Identities=9%  Similarity=-0.003  Sum_probs=54.6

Q ss_pred             EEEccCCCEEEEEeC---------CCcEEEEECCcc-----cc--ccceEEEEccCCCEEEEEec--CCceecCeeEEEe
Q psy7062          63 VGFQEDGKWMFTGGE---------DCRARIWDLSLC-----FI--QQVNALRITPDKQLLASAEE--LSCCYCGAAVFVY  124 (148)
Q Consensus        63 ~~~sp~~~~l~~~~~---------~~~i~l~d~~~~-----~~--~~i~~~~~sp~~~~l~~~~~--d~~~~~~~~i~~~  124 (148)
                      +.++|+++.++.+..         ++.+.++|+.+.     +.  .....+.|+||++.++.++.  ++      .|.++
T Consensus       269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~------~VsVI  342 (368)
T 1mda_H          269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTE------VLDIY  342 (368)
T ss_dssp             EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTT------EEEEE
T ss_pred             eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCC------eEEEE
Confidence            679999987776533         235669999887     32  67899999999985544443  55      89999


Q ss_pred             ecCCCcceeccCcccCcc
Q psy7062         125 NSCYPAAVVASNTLVKPQ  142 (148)
Q Consensus       125 d~~~~~~~~~~~~~~~~~  142 (148)
                      |..+.+.+..+...-.|.
T Consensus       343 D~~t~kvv~~I~vg~~P~  360 (368)
T 1mda_H          343 DAASDQDQSSVELDKGPE  360 (368)
T ss_dssp             ESSSCEEEEECCCCSCCC
T ss_pred             ECCCCcEEEEEECCCCCC
Confidence            999988887776554443

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=97.26  E-value=0.0079  Score=46.00  Aligned_cols=108  Identities=16%  Similarity=0.122  Sum_probs=78.4

Q ss_pred             cCcEEEEEe--CCCCccEEEEEe------------------cCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCE
Q psy7062          12 FGQISTVFD--SKHLVEMVAALG------------------GYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKW   71 (148)
Q Consensus        12 ~~~~~~~~~--~~~~~~~l~~~~------------------~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~   71 (148)
                      .++..+++.  |+  ++++++++                  .++.+.+.|.++.  +...++..- .....++++|+|++
T Consensus       134 ~~phg~~~~~~p~--~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~--~v~~qI~Vg-g~pd~~~~spdGk~  208 (595)
T 1fwx_A          134 KGIHGLRPQKWPR--SNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKW--EVAWQVLVS-GNLDNCDADYEGKW  208 (595)
T ss_dssp             CSEEEEEECCSSB--CSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTT--EEEEEEEES-SCCCCEEECSSSSE
T ss_pred             CCCcceeeeecCC--CcEEEEecccccccCCCCcccccccccCceEEEEECCCC--eEEEEEEeC-CCccceEECCCCCE
Confidence            346677774  55  77777754                  2347999999988  777777632 24567789999999


Q ss_pred             EEEEeCCC--------------------------------------cEEEEECCc--c------cc--ccceEEEEccCC
Q psy7062          72 MFTGGEDC--------------------------------------RARIWDLSL--C------FI--QQVNALRITPDK  103 (148)
Q Consensus        72 l~~~~~~~--------------------------------------~i~l~d~~~--~------~~--~~i~~~~~sp~~  103 (148)
                      +++.+.+.                                      .+.+.|..+  .      +.  ....++.++|||
T Consensus       209 ~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDG  288 (595)
T 1fwx_A          209 AFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDK  288 (595)
T ss_dssp             EEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTS
T ss_pred             EEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCC
Confidence            98887553                                      477777776  3      11  567889999999


Q ss_pred             CEEEEEecCCceecCeeEEEeecCCC
Q psy7062         104 QLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus       104 ~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                      +++++++.     ...+|.++|..+.
T Consensus       289 k~v~V~~~-----~s~~VsVid~~~~  309 (595)
T 1fwx_A          289 KHLCVAGK-----LSPTVTVLDVTRF  309 (595)
T ss_dssp             SEEEEECT-----TSSBEEEEEGGGH
T ss_pred             CEEEEeCC-----CCCeEEEEECccc
Confidence            99888875     2448999998854

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=97.19  E-value=0.015  Score=43.07  Aligned_cols=89  Identities=17%  Similarity=0.093  Sum_probs=64.2

Q ss_pred             EEeCCCCccEEEEEecC------CeEEEEeCCCCCCCceEEecCC--C-CCEEEEEEccCCCEEEEEeC-----------
Q psy7062          18 VFDSKHLVEMVAALGGY------QHIRMYDFGSNNPNPVINCEGV--S-KNVVEVGFQEDGKWMFTGGE-----------   77 (148)
Q Consensus        18 ~~~~~~~~~~l~~~~~d------~~v~~~d~~~~~~~~~~~~~~~--~-~~i~~~~~sp~~~~l~~~~~-----------   77 (148)
                      ...|+  + +++++..+      +.+.++|.++.  +.+..+...  . ..-+.+-|+|+++.+++..+           
T Consensus       144 ~~~pd--G-i~Vs~~g~~~g~~~g~v~vlD~~T~--~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~  218 (462)
T 2ece_A          144 HCGPD--A-IYISALGNEEGEGPGGILMLDHYSF--EPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLK  218 (462)
T ss_dssp             EECSS--C-EEEEEEEETTSCSCCEEEEECTTTC--CEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCC
T ss_pred             eECCC--e-EEEEcCCCcCCCCCCeEEEEECCCC--eEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccc
Confidence            33455  5 66665665      68999999998  778777622  1 22345788999999988863           


Q ss_pred             --------CCcEEEEECCcc-----cc-----ccceEEEE--ccCCCEEEEEec
Q psy7062          78 --------DCRARIWDLSLC-----FI-----QQVNALRI--TPDKQLLASAEE  111 (148)
Q Consensus        78 --------~~~i~l~d~~~~-----~~-----~~i~~~~~--sp~~~~l~~~~~  111 (148)
                              ..+|.+||+.++     +.     .....+.|  +|+++++.+++.
T Consensus       219 ~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e  272 (462)
T 2ece_A          219 LEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMV  272 (462)
T ss_dssp             TTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEE
T ss_pred             hhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEe
Confidence                    689999999876     22     23456666  999998888775

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=97.09  E-value=0.0069  Score=47.13  Aligned_cols=50  Identities=12%  Similarity=0.082  Sum_probs=37.8

Q ss_pred             CcEEEEECCcc-----cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceec
Q psy7062          79 CRARIWDLSLC-----FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVA  134 (148)
Q Consensus        79 ~~i~l~d~~~~-----~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~  134 (148)
                      +.+..||+.++     +.  .+.....++..+..++.++.|+      .++.||.++.+....
T Consensus       455 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg------~l~a~D~~tG~~lw~  511 (689)
T 1yiq_A          455 GKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADG------RVIAYAADTGEKLWE  511 (689)
T ss_dssp             EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTS------EEEEEETTTCCEEEE
T ss_pred             eeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCC------cEEEEECCCCcccee
Confidence            67999999988     22  3344446667788888998888      899999988876543

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=97.09  E-value=0.0063  Score=41.95  Aligned_cols=99  Identities=12%  Similarity=0.010  Sum_probs=66.9

Q ss_pred             cEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc--------c
Q psy7062          26 EMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI--------Q   92 (148)
Q Consensus        26 ~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~--------~   92 (148)
                      .+.++.-.++.+.++|.++.  +.+.++..-..  ....+++||+.++.+..++++.++|..+.     +.        .
T Consensus        77 ~lyv~t~~~~~v~viD~~t~--~v~~~i~~g~~--~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~  152 (266)
T 2iwa_A           77 KLYQVVWLKNIGFIYDRRTL--SNIKNFTHQMK--DGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVI  152 (266)
T ss_dssp             EEEEEETTCSEEEEEETTTT--EEEEEEECCSS--SCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECC
T ss_pred             EEEEEEecCCEEEEEECCCC--cEEEEEECCCC--CeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccc
Confidence            44444346779999999988  77888763211  13446788887777667889999999886     22        1


Q ss_pred             cceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          93 QVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        93 ~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                      .++.+.|. +++..+....      .+.|.+.|..+.+....+
T Consensus       153 ~~nele~~-dg~lyvn~~~------~~~V~vID~~tg~V~~~I  188 (266)
T 2iwa_A          153 RLNELEYI-NGEVWANIWQ------TDCIARISAKDGTLLGWI  188 (266)
T ss_dssp             CEEEEEEE-TTEEEEEETT------SSEEEEEETTTCCEEEEE
T ss_pred             cceeEEEE-CCEEEEecCC------CCeEEEEECCCCcEEEEE
Confidence            35677887 6654433323      338999999887765544

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=97.05  E-value=0.022  Score=39.21  Aligned_cols=98  Identities=6%  Similarity=-0.086  Sum_probs=66.1

Q ss_pred             cEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc--------c
Q psy7062          26 EMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI--------Q   92 (148)
Q Consensus        26 ~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~--------~   92 (148)
                      .+.+..-.++.+.+||.++.  +.+.++.....   ...++++++.++.++.+++++++|..+.     +.        .
T Consensus       107 ~Ly~ltw~~~~v~V~D~~Tl--~~~~ti~~~~e---GwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~  181 (268)
T 3nok_A          107 RLYQLTWTEGLLFTWSGMPP--QRERTTRYSGE---GWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVE  181 (268)
T ss_dssp             CEEEEESSSCEEEEEETTTT--EEEEEEECSSC---CCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECC
T ss_pred             EEEEEEccCCEEEEEECCcC--cEEEEEeCCCc---eeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccc
Confidence            34344356789999999998  88888874322   2344577888777777899999999886     11        3


Q ss_pred             cceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          93 QVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        93 ~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                      .++.+.|. +|+..+..-.      ...|.+.|..+.+....+
T Consensus       182 ~lNeLe~~-dG~lyanvw~------s~~I~vIDp~TG~V~~~I  217 (268)
T 3nok_A          182 LINELECA-NGVIYANIWH------SSDVLEIDPATGTVVGVI  217 (268)
T ss_dssp             CEEEEEEE-TTEEEEEETT------CSEEEEECTTTCBEEEEE
T ss_pred             cccccEEe-CCEEEEEECC------CCeEEEEeCCCCcEEEEE
Confidence            45667776 6654433323      338999998887755433

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=97.04  E-value=0.022  Score=43.94  Aligned_cols=113  Identities=9%  Similarity=0.039  Sum_probs=72.6

Q ss_pred             EEEEeCCCCccEEEEEecCC-----------eEEEEeCCCCCCCceEEecC-CCCCEEEEEEccCCCEEEEEeC-CCcEE
Q psy7062          16 STVFDSKHLVEMVAALGGYQ-----------HIRMYDFGSNNPNPVINCEG-VSKNVVEVGFQEDGKWMFTGGE-DCRAR   82 (148)
Q Consensus        16 ~~~~~~~~~~~~l~~~~~d~-----------~v~~~d~~~~~~~~~~~~~~-~~~~i~~~~~sp~~~~l~~~~~-~~~i~   82 (148)
                      ..++.+. .+++++.|+.+.           .+.+||..+.....+..+.. +.....++++.++++.++.|+. +..+.
T Consensus       190 ~~av~~~-~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~  268 (656)
T 1k3i_A          190 AAAIEPT-SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTS  268 (656)
T ss_dssp             EEEEETT-TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEE
T ss_pred             eEEEEec-CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceE
Confidence            3444441 278888876432           68899998874344444432 2333445677889999988885 45899


Q ss_pred             EEECCcc-------cc-cc-ceEEEEccCCCEEEEEe-cCCceecCeeEEEeecCCCc
Q psy7062          83 IWDLSLC-------FI-QQ-VNALRITPDKQLLASAE-ELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        83 l~d~~~~-------~~-~~-i~~~~~sp~~~~l~~~~-~d~~~~~~~~i~~~d~~~~~  130 (148)
                      +||..+.       +. .+ -..++..++++.++.|+ .++.. ....+.+||..+.+
T Consensus       269 ~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~-~~~~~e~yd~~t~~  325 (656)
T 1k3i_A          269 LYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGV-FEKNGEVYSPSSKT  325 (656)
T ss_dssp             EEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSS-CCCCEEEEETTTTE
T ss_pred             EecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCc-ccccceEeCCCCCc
Confidence            9999876       11 22 23456667999888888 34321 23468899987654

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=97.04  E-value=0.034  Score=37.52  Aligned_cols=108  Identities=10%  Similarity=-0.019  Sum_probs=70.0

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEE-EEeCCCcEEEEECCcc---
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMF-TGGEDCRARIWDLSLC---   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~-~~~~~~~i~l~d~~~~---   89 (148)
                      +..+++++.. +.++++-...+.|..++.+..  ..............+++++|++..++ +....+.|.++++...   
T Consensus        38 ~~gi~~d~~~-~~ly~~d~~~~~I~~~~~~g~--~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~  114 (267)
T 1npe_A           38 IIGLAFDCVD-KVVYWTDISEPSIGRASLHGG--EPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRR  114 (267)
T ss_dssp             EEEEEEETTT-TEEEEEETTTTEEEEEESSSC--CCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred             EEEEEEecCC-CEEEEEECCCCEEEEEecCCC--CcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEE
Confidence            5688888863 455556455679999999876  33333332335788999999765554 4455678999998654   


Q ss_pred             -c-c---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          90 -F-I---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        90 -~-~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                       + .   .....++++|++..|..+....   ....|..++..
T Consensus       115 ~~~~~~~~~P~~i~vd~~~g~lyv~~~~~---~~~~I~~~~~d  154 (267)
T 1npe_A          115 VLFDTGLVNPRGIVTDPVRGNLYWTDWNR---DNPKIETSHMD  154 (267)
T ss_dssp             EEECSSCSSEEEEEEETTTTEEEEEECCS---SSCEEEEEETT
T ss_pred             EEEECCCCCccEEEEeeCCCEEEEEECCC---CCcEEEEEecC
Confidence             1 1   4678899999766655555321   12367766654

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=96.95  E-value=0.044  Score=40.16  Aligned_cols=109  Identities=18%  Similarity=0.213  Sum_probs=67.9

Q ss_pred             ecCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC-C----cEEEEE
Q psy7062          11 AFGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED-C----RARIWD   85 (148)
Q Consensus        11 ~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~-~----~i~l~d   85 (148)
                      +..+..++++|...+.++++ ...+.|+.+|++..  . +..+.........++++++++.++.+... +    .+..++
T Consensus       136 ~~~P~~lavdp~~~g~Lyv~-d~~~~I~~id~~~~--~-v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~  211 (430)
T 3tc9_A          136 FGGAVWLSFDPKNHNHLYLV-GEQHPTRLIDFEKE--Y-VSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILT  211 (430)
T ss_dssp             CSCCCEEEEETTEEEEEEEE-EBTEEEEEEETTTT--E-EEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEE
T ss_pred             CCCCCEEEECCCCCCeEEEE-eCCCcEEEEECCCC--E-EEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEe
Confidence            44678889997322555555 54478999999875  3 44443355678899999999966665542 2    233344


Q ss_pred             CCccc------c--ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          86 LSLCF------I--QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        86 ~~~~~------~--~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                      ....+      .  .....++++| ++..+++-..++      +|..+|....
T Consensus       212 ~~g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~------~V~~~~~~~~  258 (430)
T 3tc9_A          212 RESGFKVITELTKGQNCNGAETHPINGELYFNSWNAG------QVFRYDFTTQ  258 (430)
T ss_dssp             GGGTSCSEEEEEECSSCCCEEECTTTCCEEEEETTTT------EEEEEETTTT
T ss_pred             CCCceeeeeeeccCCCceEEEEeCCCCEEEEEECCCC------EEEEEECCCC
Confidence            32221      1  4567889999 666555544433      7888887643

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=96.94  E-value=0.024  Score=39.00  Aligned_cols=92  Identities=8%  Similarity=-0.006  Sum_probs=62.5

Q ss_pred             ecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc--------ccceEEE
Q psy7062          32 GGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI--------QQVNALR   98 (148)
Q Consensus        32 ~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~--------~~i~~~~   98 (148)
                      -.++.+.+||.++.  +.+.++....   .+..++++++.++..+.+++++++|..+.     +.        ..++.+.
T Consensus       104 w~~~~v~v~D~~t~--~~~~ti~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe  178 (262)
T 3nol_A          104 WKNGLGFVWNIRNL--RQVRSFNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELE  178 (262)
T ss_dssp             SSSSEEEEEETTTC--CEEEEEECSS---CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEE
T ss_pred             eeCCEEEEEECccC--cEEEEEECCC---CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeE
Confidence            45789999999998  8888887432   23455678887777666889999999876     11        2234567


Q ss_pred             EccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          99 ITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        99 ~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                      |. +|+.. ....     ..+.|.++|..+.+....+
T Consensus       179 ~~-~G~ly-an~w-----~~~~I~vIDp~tG~V~~~I  208 (262)
T 3nol_A          179 WV-DGEIF-ANVW-----QTNKIVRIDPETGKVTGII  208 (262)
T ss_dssp             EE-TTEEE-EEET-----TSSEEEEECTTTCBEEEEE
T ss_pred             EE-CCEEE-EEEc-----cCCeEEEEECCCCcEEEEE
Confidence            76 66544 4432     1337999998887755433

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=96.85  E-value=0.036  Score=39.41  Aligned_cols=105  Identities=13%  Similarity=0.142  Sum_probs=74.0

Q ss_pred             EEEEE---eCCCCccEEEEEec-------------CCeEEEEeCC---CCCCCceEEec--CC-----------CCCEEE
Q psy7062          15 ISTVF---DSKHLVEMVAALGG-------------YQHIRMYDFG---SNNPNPVINCE--GV-----------SKNVVE   62 (148)
Q Consensus        15 ~~~~~---~~~~~~~~l~~~~~-------------d~~v~~~d~~---~~~~~~~~~~~--~~-----------~~~i~~   62 (148)
                      ..+.+   |+.  +.++++...             +..+..||++   ++  +.+....  ..           ......
T Consensus        66 sGl~~~~~D~~--grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg--~~~~~~dL~~~~~~~~~~~g~~~~~~nD  141 (334)
T 2p9w_A           66 SGLSLLTHDNS--KRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENS--KPVWSVNFEKVQDEFEKKAGKRPFGVVQ  141 (334)
T ss_dssp             EEEEESSSSSC--CEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTC--CCSEEEESHHHHHHHHHHHSSCCEEEEE
T ss_pred             eEEEEeccCCC--CcEEEEEcccccccccccccCCCCEEEEEcCCcCCCC--CEEEEecCccccccccccccccccCCce
Confidence            56777   565  788886332             5789999999   66  4443322  11           124789


Q ss_pred             EEEccCCCEEEEEeCC-CcEEEEECCcc----c------c---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062          63 VGFQEDGKWMFTGGED-CRARIWDLSLC----F------I---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        63 ~~~sp~~~~l~~~~~~-~~i~l~d~~~~----~------~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                      +.+.++|+..++++.. +.|...+....    +      .   .....++++|+++.|++....+      ++..+|+..
T Consensus       142 vavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g------~L~~fD~~~  215 (334)
T 2p9w_A          142 SAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPR------ALTAFDVSK  215 (334)
T ss_dssp             EEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSS------SEEEEECSS
T ss_pred             eEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCC------eEEEEcCCC
Confidence            9999999999988887 77666665432    1      1   3366899999999888887666      788889875


Q ss_pred             C
Q psy7062         129 P  129 (148)
Q Consensus       129 ~  129 (148)
                      +
T Consensus       216 p  216 (334)
T 2p9w_A          216 P  216 (334)
T ss_dssp             S
T ss_pred             C
Confidence            4

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=96.78  E-value=0.0088  Score=46.54  Aligned_cols=71  Identities=11%  Similarity=0.101  Sum_probs=50.9

Q ss_pred             CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc--cc--ceEEEEccCCCE
Q psy7062          35 QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI--QQ--VNALRITPDKQL  105 (148)
Q Consensus        35 ~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~--~~--i~~~~~sp~~~~  105 (148)
                      +.+..||+.++  +.+...+.+.. ...-.+...+..++.++.|+.++.||.+++     +.  ..  ..-+.|..+|++
T Consensus       455 g~l~A~D~~tG--~~~W~~~~~~~-~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~q  531 (689)
T 1yiq_A          455 GKLIAWDPVKQ--QAAWEVPYVTI-FNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQ  531 (689)
T ss_dssp             EEEEEEETTTT--EEEEEEEESSS-CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred             eeEEEEECCCC--CeEeEccCCCC-ccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEE
Confidence            77999999998  77777664432 233356677888999999999999999998     22  11  234677778874


Q ss_pred             EEE
Q psy7062         106 LAS  108 (148)
Q Consensus       106 l~~  108 (148)
                      .+.
T Consensus       532 yv~  534 (689)
T 1yiq_A          532 YVT  534 (689)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            444

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=96.77  E-value=0.07  Score=37.06  Aligned_cols=105  Identities=14%  Similarity=0.138  Sum_probs=67.6

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecC-----CCCCEEEEEEcc-CCCEEEEEeC----------
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEG-----VSKNVVEVGFQE-DGKWMFTGGE----------   77 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~-----~~~~i~~~~~sp-~~~~l~~~~~----------   77 (148)
                      +..++++++. ++++++ ...+.+..+|.+++  . +..+..     .......+++.+ +|+..++...          
T Consensus        82 p~gi~~~~~~-g~l~v~-d~~~~i~~~d~~~g--~-~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~  156 (322)
T 2fp8_A           82 TYDISYNLQN-NQLYIV-DCYYHLSVVGSEGG--H-ATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQ  156 (322)
T ss_dssp             EEEEEEETTT-TEEEEE-ETTTEEEEECTTCE--E-CEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHH
T ss_pred             CceEEEcCCC-CcEEEE-ECCCCEEEEeCCCC--E-EEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccce
Confidence            5677788621 566555 55566888887754  2 222211     123578899999 9987766432          


Q ss_pred             -------CCcEEEEECCcc----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062          78 -------DCRARIWDLSLC----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        78 -------~~~i~l~d~~~~----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                             ++.+..+|..++    +.   .....++|+|+++.|..+...     ...|..|++..
T Consensus       157 ~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~-----~~~I~~~~~~~  216 (322)
T 2fp8_A          157 IMDTSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFL-----SHQIVKYWLEG  216 (322)
T ss_dssp             HHHHTCCCEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGG-----GTEEEEEESSS
T ss_pred             ehcccCCCceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCC-----CCeEEEEECCC
Confidence                   367888888655    11   456789999999877666431     22788888764

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=96.70  E-value=0.039  Score=37.51  Aligned_cols=97  Identities=12%  Similarity=0.105  Sum_probs=64.0

Q ss_pred             cEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc--------c
Q psy7062          26 EMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI--------Q   92 (148)
Q Consensus        26 ~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~--------~   92 (148)
                      .+.+..-.++.+.+||.++.  +.+.++.....   ...+++++..++.+..++.+.++|..+.     +.        .
T Consensus        76 ~ly~ltw~~~~v~v~D~~tl--~~~~ti~~~~~---Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~  150 (243)
T 3mbr_X           76 RLIQLTWRNHEGFVYDLATL--TPRARFRYPGE---GWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLD  150 (243)
T ss_dssp             EEEEEESSSSEEEEEETTTT--EEEEEEECSSC---CCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECC
T ss_pred             EEEEEEeeCCEEEEEECCcC--cEEEEEeCCCC---ceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccc
Confidence            34444356789999999998  88888874332   2344577776666667889999999886     11        3


Q ss_pred             cceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceec
Q psy7062          93 QVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVA  134 (148)
Q Consensus        93 ~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~  134 (148)
                      .++.+.|. +|+.++..-.      .+.|.+.|..+.+....
T Consensus       151 ~lNeLe~~-~G~lyanvw~------s~~I~vIDp~tG~V~~~  185 (243)
T 3mbr_X          151 NLNELEWV-NGELLANVWL------TSRIARIDPASGKVVAW  185 (243)
T ss_dssp             CEEEEEEE-TTEEEEEETT------TTEEEEECTTTCBEEEE
T ss_pred             cceeeEEe-CCEEEEEECC------CCeEEEEECCCCCEEEE
Confidence            44556664 5554433323      33799999888775443

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=96.68  E-value=0.084  Score=36.67  Aligned_cols=92  Identities=7%  Similarity=0.042  Sum_probs=61.3

Q ss_pred             cCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecC--------------------CCCCEEEEEEcc-CCC
Q psy7062          12 FGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEG--------------------VSKNVVEVGFQE-DGK   70 (148)
Q Consensus        12 ~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~--------------------~~~~i~~~~~sp-~~~   70 (148)
                      ..+..++++++  +.++.++..++.|..||.+++  . +..+..                    ....+.++++.+ +++
T Consensus        19 ~~p~~i~~d~~--g~~l~v~~~~~~i~~~~~~~~--~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~   93 (322)
T 2fp8_A           19 YAPNSFTFDST--NKGFYTSVQDGRVIKYEGPNS--G-FVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ   93 (322)
T ss_dssp             SCCCCEECCTT--CSSEEEECTTSEEEEECCTTT--C-EEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE
T ss_pred             CCceEEEEcCC--CCEEEEEcCCCeEEEECCCCC--c-eEEEecccccccccccccccchhccccCCCCceEEEcCCCCc
Confidence            34678888887  776677678889999998765  2 222210                    013578999998 565


Q ss_pred             EEEEEeCCCcEEEEECCcc----cc--------ccceEEEEcc-CCCEEEEE
Q psy7062          71 WMFTGGEDCRARIWDLSLC----FI--------QQVNALRITP-DKQLLASA  109 (148)
Q Consensus        71 ~l~~~~~~~~i~l~d~~~~----~~--------~~i~~~~~sp-~~~~l~~~  109 (148)
                      . +.++..+.+..+|...+    +.        .....+++.+ +|+..++-
T Consensus        94 l-~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d  144 (322)
T 2fp8_A           94 L-YIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTD  144 (322)
T ss_dssp             E-EEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEE
T ss_pred             E-EEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEEC
Confidence            4 44444555888887754    21        3467789999 89866654

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=96.64  E-value=0.013  Score=45.52  Aligned_cols=90  Identities=11%  Similarity=0.017  Sum_probs=59.6

Q ss_pred             CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc----ccceEEEEccCCCE
Q psy7062          35 QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI----QQVNALRITPDKQL  105 (148)
Q Consensus        35 ~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~----~~i~~~~~sp~~~~  105 (148)
                      +.+..||+.++  +.+.... +...+.+..+..++..++.++.++.++.||.+++     +.    ....-+.|..+|++
T Consensus       457 g~l~A~D~~tG--~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~  533 (677)
T 1kb0_A          457 GRLLAWDPVAQ--KAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQ  533 (677)
T ss_dssp             EEEEEEETTTT--EEEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred             cEEEEEeCCCC--cEEeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEE
Confidence            68999999998  7777665 3333444556778888888999999999999988     22    22233566678875


Q ss_pred             EEEEecC-C----------ceecCeeEEEeecC
Q psy7062         106 LASAEEL-S----------CCYCGAAVFVYNSC  127 (148)
Q Consensus       106 l~~~~~d-~----------~~~~~~~i~~~d~~  127 (148)
                      ++..... +          ....+..+..+.+.
T Consensus       534 ~v~~~~G~~~~~~~~~~~~~~~~~~~l~~f~l~  566 (677)
T 1kb0_A          534 YVSVAVGWGGVYGLAARATERQGPGTVYTFVVG  566 (677)
T ss_dssp             EEEEEECCCHHHHHHCCSCSCCCCCEEEEEEET
T ss_pred             EEEEeccCCccccccccccccCCCCeEEEEecc
Confidence            5443221 1          11224567777766

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=96.54  E-value=0.075  Score=39.02  Aligned_cols=109  Identities=12%  Similarity=0.156  Sum_probs=65.5

Q ss_pred             eecCcEEEEEeCC-CCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC---Cc-EEEE
Q psy7062          10 TAFGQISTVFDSK-HLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED---CR-ARIW   84 (148)
Q Consensus        10 ~~~~~~~~~~~~~-~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~---~~-i~l~   84 (148)
                      ++..+..++++++ ..+.++++ ...+.|+.+|.+++   .+..+........+++++++|+++++....   .. +...
T Consensus       137 ~~~~P~gvavd~~s~~g~Lyv~-D~~~~I~~id~~~g---~v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~  212 (433)
T 4hw6_A          137 AFDNIWRMMFDPNSNYDDLYWV-GQRDAFRHVDFVNQ---YVDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLF  212 (433)
T ss_dssp             CCSCCCEEEECTTTTTCEEEEE-CBTSCEEEEETTTT---EEEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEE
T ss_pred             ccCCCceEEEccccCCCEEEEE-eCCCCEEEEECCCC---EEEEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEE
Confidence            3445788999985 33666666 44488999999876   344444455668999999999944443321   12 3333


Q ss_pred             ECCccc------c--ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeecCC
Q psy7062          85 DLSLCF------I--QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        85 d~~~~~------~--~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                      +....+      .  .....++++| ++..+++-..++      +|+.+|..+
T Consensus       213 ~~~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~------~V~~~d~~~  259 (433)
T 4hw6_A          213 TRASGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHA------MISSYDPAT  259 (433)
T ss_dssp             CGGGTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCS------EEEEECTTT
T ss_pred             ECCCCeeccccccccCCCCEEEEeCCCCeEEEEECCCC------EEEEEECCC
Confidence            322221      1  4456788888 565544443433      677777653

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=96.50  E-value=0.11  Score=38.34  Aligned_cols=94  Identities=9%  Similarity=0.066  Sum_probs=66.2

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEecCC----CCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----------
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGV----SKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----------   89 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~----~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----------   89 (148)
                      +.-++. ..++.+|..++...  ..-+.+...    -..+..+..||+|.+++..+ +..+.+-.+..+           
T Consensus        32 ~t~i~~-a~~n~iR~~~i~~~--~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~  107 (452)
T 3pbp_A           32 GTRIVF-IQDNIIRWYNVLTD--SLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQD  107 (452)
T ss_dssp             TTEEEE-EETTEEEEEETTTC--SSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHH
T ss_pred             CCEEEE-EECCEEEEEECCCC--CcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCccccccc
Confidence            444455 44688999888754  334444322    22577899999999998875 457888888722           


Q ss_pred             ------cc---------ccceEEEEcc---CCCEEEEEecCCceecCeeEEEeecCC
Q psy7062          90 ------FI---------QQVNALRITP---DKQLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        90 ------~~---------~~i~~~~~sp---~~~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                            +.         .+|..+.|||   .+..|++-..|+      .|++||+..
T Consensus       108 ~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~------~Ir~yDl~~  158 (452)
T 3pbp_A          108 AFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDD------TITMFDILN  158 (452)
T ss_dssp             TTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTS------CEEEEETTC
T ss_pred             ccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCC------EEEEEEccc
Confidence                  11         4589999999   456788888877      899999986

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=96.49  E-value=0.12  Score=36.09  Aligned_cols=107  Identities=7%  Similarity=-0.067  Sum_probs=70.4

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC--CcEEEEECCcc-
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED--CRARIWDLSLC-   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~--~~i~l~d~~~~-   89 (148)
                      .+..+++++.. +.+.++-...+.|.+++.+..  .....+...-.....+++.|.+..++..+..  +.|...+.... 
T Consensus        78 ~p~glavd~~~-~~ly~~d~~~~~I~~~~~~g~--~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~  154 (316)
T 1ijq_A           78 APDGLAVDWIH-SNIYWTDSVLGTVSVADTKGV--KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD  154 (316)
T ss_dssp             CCCEEEEETTT-TEEEEEETTTTEEEEEETTSS--SEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC
T ss_pred             CcCEEEEeecC-CeEEEEECCCCEEEEEeCCCC--ceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC
Confidence            45788888653 455566456778999998864  3222333234567899999976666555543  67888887543 


Q ss_pred             ---cc----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          90 ---FI----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        90 ---~~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                         +.    .....++++|++..|..+...     ..+|..+|..
T Consensus       155 ~~~~~~~~~~~P~gla~d~~~~~lY~~D~~-----~~~I~~~d~d  194 (316)
T 1ijq_A          155 IYSLVTENIQWPNGITLDLLSGRLYWVDSK-----LHSISSIDVN  194 (316)
T ss_dssp             EEEEECSSCSCEEEEEEETTTTEEEEEETT-----TTEEEEEETT
T ss_pred             eEEEEECCCCCceEEEEeccCCEEEEEECC-----CCeEEEEecC
Confidence               21    567789999977776666542     2368778765

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=96.42  E-value=0.11  Score=38.15  Aligned_cols=106  Identities=6%  Similarity=-0.020  Sum_probs=64.3

Q ss_pred             CcEEEEEeCCCCccEEEEEec-CC----eEEEEeCCCCCCCceEEecCCCCCEEEEEEcc-CCCEEEEEeCCCcEEEEEC
Q psy7062          13 GQISTVFDSKHLVEMVAALGG-YQ----HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQE-DGKWMFTGGEDCRARIWDL   86 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~-d~----~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~~~~i~l~d~   86 (148)
                      .+..++++++  ++.|+++.. ++    .+..++.... ......+. ......+++++| ++.++++-..++.|..+|.
T Consensus       180 ~P~~ia~d~~--G~~lyvad~~~~~~~~~v~~~~~~g~-~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~  255 (430)
T 3tc9_A          180 KVRTICWTHE--ADSMIITNDQNNNDRPNNYILTRESG-FKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDF  255 (430)
T ss_dssp             CEEEEEECTT--SSEEEEEECCSCTTSEEEEEEEGGGT-SCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEET
T ss_pred             CcceEEEeCC--CCEEEEEeCCCCcccceEEEEeCCCc-eeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEEC
Confidence            3567888887  664444343 11    3444444332 12112222 123356778999 6776666667789999998


Q ss_pred             Ccc-c----c----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          87 SLC-F----I----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        87 ~~~-~----~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                      ... .    .    .....++|+|++++|..+...     ..+|..++..
T Consensus       256 ~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~-----~~~I~~~~~d  300 (430)
T 3tc9_A          256 TTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVN-----QHYILRSDYD  300 (430)
T ss_dssp             TTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETT-----TTEEEEEEEE
T ss_pred             CCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECC-----CCEEEEEeCC
Confidence            765 2    1    357889999999966666542     2268877654

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=96.42  E-value=0.15  Score=36.64  Aligned_cols=108  Identities=8%  Similarity=-0.081  Sum_probs=70.2

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeC-C-CcEEEEECCcc-
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE-D-CRARIWDLSLC-   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-~-~~i~l~d~~~~-   89 (148)
                      .+..+++++.. +.++++-...+.|.+.+++..  .....+...-.....+++.|.+..|+.... . +.|..++.... 
T Consensus       160 ~p~glavd~~~-g~lY~~d~~~~~I~~~~~dg~--~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~  236 (386)
T 3v65_B          160 SPGGLAVDWVH-DKLYWTDSGTSRIEVANLDGA--HRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG  236 (386)
T ss_dssp             CCCCEEEETTT-TEEEEEETTTTEEEECBTTSC--SCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS
T ss_pred             CccEEEEEeCC-CeEEEEcCCCCeEEEEeCCCC--ceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCC
Confidence            35667888653 555566456678999888765  333333333466889999997766655544 3 67888887654 


Q ss_pred             ---c-c---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062          90 ---F-I---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        90 ---~-~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                         + .   .....++|+|++..|..+...     ...|..+|+..
T Consensus       237 ~~~~~~~~~~~PnGlavd~~~~~lY~aD~~-----~~~I~~~d~dG  277 (386)
T 3v65_B          237 RRIIADTHLFWPNGLTIDYAGRRMYWVDAK-----HHVIERANLDG  277 (386)
T ss_dssp             CEEEECSSCSCEEEEEEEGGGTEEEEEETT-----TTEEEEECTTS
T ss_pred             cEEEEECCCCCeeeEEEeCCCCEEEEEECC-----CCEEEEEeCCC
Confidence               2 1   457889999877766666542     23677777653

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=96.30  E-value=0.19  Score=39.41  Aligned_cols=109  Identities=9%  Similarity=-0.006  Sum_probs=62.1

Q ss_pred             EEEEeCCCCccEEEEEecC-----CeEEEEeCCCCCCCceEEec-CCCCCEEEEEEccCCCEEEEEeC---CCcEEEEEC
Q psy7062          16 STVFDSKHLVEMVAALGGY-----QHIRMYDFGSNNPNPVINCE-GVSKNVVEVGFQEDGKWMFTGGE---DCRARIWDL   86 (148)
Q Consensus        16 ~~~~~~~~~~~~l~~~~~d-----~~v~~~d~~~~~~~~~~~~~-~~~~~i~~~~~sp~~~~l~~~~~---~~~i~l~d~   86 (148)
                      .++|+++  ++.|+....+     ..|.++++.++..+....+. ........+.|+|||++|+..+.   ...++++|+
T Consensus       225 ~~~WspD--g~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~  302 (751)
T 2xe4_A          225 EIVWGPD--HTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDL  302 (751)
T ss_dssp             CCEECSS--TTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEES
T ss_pred             eEEEecC--CCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEEC
Confidence            5678887  5444443544     25788888776211223332 23345678899999998876553   346888898


Q ss_pred             Ccc---c--c-------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062          87 SLC---F--I-------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        87 ~~~---~--~-------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                      .+.   +  .       ...+.+.|+.++.+++.+..++  .....|..+|+.+
T Consensus       303 ~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~--a~~~~L~~~d~~~  354 (751)
T 2xe4_A          303 RKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGG--AVNHKLLIAPRGQ  354 (751)
T ss_dssp             SSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTT--CTTCEEEEEETTS
T ss_pred             CCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCC--CCCcEEEEEcCCC
Confidence            653   3  2       2334444443444555555430  0234677888764

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=96.26  E-value=0.18  Score=35.76  Aligned_cols=108  Identities=8%  Similarity=-0.081  Sum_probs=71.1

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeC-C-CcEEEEECCcc-
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE-D-CRARIWDLSLC-   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-~-~~i~l~d~~~~-   89 (148)
                      .+..+++++.. +.++++-...+.|.+.+++..  .....+...-.....+++.|.+..++.... . +.|..++.... 
T Consensus       117 ~p~glavd~~~-g~ly~~d~~~~~I~~~~~dG~--~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~  193 (349)
T 3v64_C          117 SPGGLAVDWVH-DKLYWTDSGTSRIEVANLDGA--HRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG  193 (349)
T ss_dssp             CCCEEEEETTT-TEEEEEETTTTEEEEEETTSC--SCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS
T ss_pred             CccEEEEecCC-CeEEEEcCCCCeEEEEcCCCC--ceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC
Confidence            45678888753 555566456678999999865  333333333456789999996665554443 4 77888887654 


Q ss_pred             ---c-c---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062          90 ---F-I---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        90 ---~-~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                         + .   .....++++|++..|..+...     ..+|..+|+..
T Consensus       194 ~~~~~~~~~~~PnGla~d~~~~~lY~aD~~-----~~~I~~~~~dG  234 (349)
T 3v64_C          194 RRIIADTHLFWPNGLTIDYAGRRMYWVDAK-----HHVIERANLDG  234 (349)
T ss_dssp             CEESCCSSCSCEEEEEEETTTTEEEEEETT-----TTEEEEEETTS
T ss_pred             cEEEEECCCCCcceEEEeCCCCEEEEEECC-----CCEEEEEeCCC
Confidence               2 1   557889999877766666542     23677777653

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=96.21  E-value=0.16  Score=34.70  Aligned_cols=105  Identities=10%  Similarity=0.098  Sum_probs=72.6

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecC-CCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEG-VSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~-~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--   89 (148)
                      ....++|+++. +.++++...++.|...|.. +  +.++.+.- -.....++++.+++.++++.-.++.+.++++...  
T Consensus        28 ~lSGla~~~~~-~~L~aV~d~~~~I~~ld~~-g--~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~  103 (255)
T 3qqz_A           28 NISSLTWSAQS-NTLFSTINKPAAIVEMTTN-G--DLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSE  103 (255)
T ss_dssp             CEEEEEEETTT-TEEEEEEETTEEEEEEETT-C--CEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCC
T ss_pred             CcceeEEeCCC-CEEEEEECCCCeEEEEeCC-C--CEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCe
Confidence            46789999873 5566665677788888987 5  66666542 2367889999998887777656678888876533  


Q ss_pred             --------cc-------ccceEEEEccCCCEEEEEecCCceecCeeEEEee
Q psy7062          90 --------FI-------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYN  125 (148)
Q Consensus        90 --------~~-------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d  125 (148)
                              +.       ...-.++|+|.++.|.++.+..    ...|+-|+
T Consensus       104 i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~----p~~i~~~~  150 (255)
T 3qqz_A          104 VKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN----PIEVYKVN  150 (255)
T ss_dssp             EEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESS----SEEEEEEE
T ss_pred             eeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcC----CceEEEEc
Confidence                    11       3346899999887777776544    22455555

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=96.19  E-value=0.17  Score=35.80  Aligned_cols=97  Identities=10%  Similarity=0.048  Sum_probs=60.1

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEecCC---------CCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----c
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGV---------SKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----F   90 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~---------~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~   90 (148)
                      +..+++++.++.+..+|.+++  +.+......         ...+.. ....++..++.++.++.+..+|..++     +
T Consensus        53 ~~~v~~~~~~g~v~a~d~~tG--~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~  129 (376)
T 3q7m_A           53 DNVVYAADRAGLVKALNADDG--KEIWSVSLAEKDGWFSKEPALLSG-GVTVSGGHVYIGSEKAQVYALNTSDGTVAWQT  129 (376)
T ss_dssp             TTEEEEECTTSEEEEEETTTC--CEEEEEECCC---CCSCCCCCEEE-EEEEETTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred             CCEEEEEcCCCeEEEEEccCC--ceeeeecCccccccccccCccccc-CceEeCCEEEEEcCCCEEEEEECCCCCEEEEE
Confidence            455666678889999999998  666555432         122222 22334567777888999999999887     1


Q ss_pred             c--ccceE-EEEccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062          91 I--QQVNA-LRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV  132 (148)
Q Consensus        91 ~--~~i~~-~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~  132 (148)
                      .  ..+.. ...  .+..++.++.++      .+..+|..+.+..
T Consensus       130 ~~~~~~~~~p~~--~~~~v~v~~~~g------~l~~~d~~tG~~~  166 (376)
T 3q7m_A          130 KVAGEALSRPVV--SDGLVLIHTSNG------QLQALNEADGAVK  166 (376)
T ss_dssp             ECSSCCCSCCEE--ETTEEEEECTTS------EEEEEETTTCCEE
T ss_pred             eCCCceEcCCEE--ECCEEEEEcCCC------eEEEEECCCCcEE
Confidence            1  11111 111  234566666666      7888887766543

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=96.14  E-value=0.23  Score=35.93  Aligned_cols=107  Identities=7%  Similarity=-0.081  Sum_probs=71.9

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeC--CCcEEEEECCcc-
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE--DCRARIWDLSLC-   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~--~~~i~l~d~~~~-   89 (148)
                      .+..+++++.. +.+.++-...+.|.+.+++..  .....+...-....++++.|.+..|+...+  .+.|...++... 
T Consensus       160 ~p~glavD~~~-~~lY~~d~~~~~I~~~~~~g~--~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~  236 (400)
T 3p5b_L          160 APDGLAVDWIH-SNIYWTDSVLGTVSVADTKGV--KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD  236 (400)
T ss_dssp             CEEEEEEETTT-TEEEEEETTTTEEEEECTTTC--SEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCS
T ss_pred             CcccEEEEecC-CceEEEECCCCeEEEEeCCCC--ceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCc
Confidence            45788888753 556666456778999999865  333333334456889999997666655553  367888888654 


Q ss_pred             ---c-c---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          90 ---F-I---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        90 ---~-~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                         + .   .....+++++++..|..+...     ...|..+|+.
T Consensus       237 ~~~~~~~~l~~P~glavd~~~~~lY~aD~~-----~~~I~~~d~d  276 (400)
T 3p5b_L          237 IYSLVTENIQWPNGITLDLLSGRLYWVDSK-----LHSISSIDVN  276 (400)
T ss_dssp             CEEEECSSCSCEEEEEEETTTTEEEEEETT-----TTEEEEEETT
T ss_pred             cEEEEECCCCceEEEEEEeCCCEEEEEECC-----CCEEEEEeCC
Confidence               2 1   567889999877777766542     2367777765

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=96.14  E-value=0.18  Score=34.73  Aligned_cols=104  Identities=14%  Similarity=0.042  Sum_probs=63.5

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCC--cEEEEECCcc-
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDC--RARIWDLSLC-   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~--~i~l~d~~~~-   89 (148)
                      .+..++|+++  +.++++-..++.|..||.+..   ....+. ....+.++++.++|+++++.....  .+..+|..++ 
T Consensus        33 ~pegia~~~~--g~lyv~d~~~~~I~~~d~~g~---~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~  106 (306)
T 2p4o_A           33 FLENLASAPD--GTIFVTNHEVGEIVSITPDGN---QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGT  106 (306)
T ss_dssp             CEEEEEECTT--SCEEEEETTTTEEEEECTTCC---EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSC
T ss_pred             CcceEEECCC--CCEEEEeCCCCeEEEECCCCc---eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCe
Confidence            4678899886  777777557789999998754   333333 245688999999999665543322  4666776665 


Q ss_pred             cc--------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062          90 FI--------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        90 ~~--------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                      +.        .....++..+++..+++-..++      .|+++|...
T Consensus       107 ~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g------~i~~~d~~~  147 (306)
T 2p4o_A          107 VETLLTLPDAIFLNGITPLSDTQYLTADSYRG------AIWLIDVVQ  147 (306)
T ss_dssp             EEEEEECTTCSCEEEEEESSSSEEEEEETTTT------EEEEEETTT
T ss_pred             EEEEEeCCCccccCcccccCCCcEEEEECCCC------eEEEEeCCC
Confidence            11        1122333344444444333334      688887653

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=95.91  E-value=0.11  Score=39.58  Aligned_cols=51  Identities=10%  Similarity=-0.121  Sum_probs=33.5

Q ss_pred             CCcEEEEECCcc-----cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceec
Q psy7062          78 DCRARIWDLSLC-----FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVA  134 (148)
Q Consensus        78 ~~~i~l~d~~~~-----~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~  134 (148)
                      ++.+..||+.++     +.  ..+........+..++.++.|+      .++.+|.++.+....
T Consensus       443 ~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g~~dg------~l~a~D~~tG~~lw~  500 (571)
T 2ad6_A          443 MGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDG------YLKALDNKDGKELWN  500 (571)
T ss_dssp             CEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTS------EEEEEETTTCCEEEE
T ss_pred             CCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEEcCCC------eEEEEECCCCCEEEE
Confidence            468889999877     11  2333333333556677788877      899999887776543

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=95.82  E-value=0.33  Score=34.94  Aligned_cols=108  Identities=8%  Similarity=-0.020  Sum_probs=68.7

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCC-EEEEEeCCCcEEEEECCcc--
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGK-WMFTGGEDCRARIWDLSLC--   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~~~~~i~l~d~~~~--   89 (148)
                      .+..++|++.. +.++.+-...+.|..++++..  .....+........++++.+.+. ++.+-...+.|.+.++...  
T Consensus       117 ~~~gl~~d~~~-~~ly~~D~~~~~I~r~~~~g~--~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~  193 (386)
T 3v65_B          117 NAIALDFHHRR-ELVFWSDVTLDRILRANLNGS--NVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR  193 (386)
T ss_dssp             CEEEEEEETTT-TEEEEEETTTTEEEEEETTSC--CEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSC
T ss_pred             ccEEEEEecCC-CeEEEEeCCCCcEEEEecCCC--CcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCce
Confidence            35678888753 556566456678999999876  33333332234556788888555 4455555678888888654  


Q ss_pred             ---cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          90 ---FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        90 ---~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                         +.   .....++++|.+..|..+....    ..+|..++..
T Consensus       194 ~~l~~~~l~~P~giavdp~~g~ly~td~~~----~~~I~r~~~d  233 (386)
T 3v65_B          194 KVLLWQSLEKPRAIALHPMEGTIYWTDWGN----TPRIEASSMD  233 (386)
T ss_dssp             EEEECSSCSCEEEEEEETTTTEEEEEECSS----SCEEEEEETT
T ss_pred             EEeecCCCCCCcEEEEEcCCCeEEEeccCC----CCEEEEEeCC
Confidence               11   5678899998776666554322    2367777655

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=95.68  E-value=0.096  Score=40.62  Aligned_cols=50  Identities=12%  Similarity=0.092  Sum_probs=36.2

Q ss_pred             CCcEEEEECCcc-----cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCccee
Q psy7062          78 DCRARIWDLSLC-----FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVV  133 (148)
Q Consensus        78 ~~~i~l~d~~~~-----~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~  133 (148)
                      ++.+..||+.++     +.  .+.....+...+..++.++.|+      .++.||..+.+...
T Consensus       437 ~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg------~l~a~d~~tG~~l~  493 (668)
T 1kv9_A          437 SGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAG------QMHAYSADKGEALW  493 (668)
T ss_dssp             EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTS------EEEEEETTTCCEEE
T ss_pred             cceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECCcc------cchhhhhhcChhhe
Confidence            377999999888     11  3344445556778888888877      89999988776544

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=95.56  E-value=0.37  Score=33.76  Aligned_cols=107  Identities=8%  Similarity=-0.080  Sum_probs=71.3

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeC--CCcEEEEECCcc-
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE--DCRARIWDLSLC-   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~--~~~i~l~d~~~~-   89 (148)
                      .+..+++++.. +.++++-...+.|.+++++..  .........-....++++.|.+..++....  .+.|...+.... 
T Consensus        80 ~p~glavd~~~-g~ly~~d~~~~~I~~~~~dG~--~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~  156 (318)
T 3sov_A           80 SPDGLACDWLG-EKLYWTDSETNRIEVSNLDGS--LRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS  156 (318)
T ss_dssp             CCCEEEEETTT-TEEEEEETTTTEEEEEETTSC--SCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS
T ss_pred             CccEEEEEcCC-CeEEEEECCCCEEEEEECCCC--cEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC
Confidence            45678888753 556566456678999999865  333333334566889999997666655553  577888887643 


Q ss_pred             ---c-c---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          90 ---F-I---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        90 ---~-~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                         + .   .....++++|++..|..+...     ...|..+|+.
T Consensus       157 ~~~~~~~~l~~Pnglavd~~~~~lY~aD~~-----~~~I~~~d~d  196 (318)
T 3sov_A          157 RFIIINSEIYWPNGLTLDYEEQKLYWADAK-----LNFIHKSNLD  196 (318)
T ss_dssp             CEEEECSSCSCEEEEEEETTTTEEEEEETT-----TTEEEEEETT
T ss_pred             eEEEEECCCCCccEEEEeccCCEEEEEECC-----CCEEEEEcCC
Confidence               2 1   556889999977766666542     2368888765

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=95.54  E-value=0.69  Score=36.77  Aligned_cols=107  Identities=7%  Similarity=-0.079  Sum_probs=71.0

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC--CcEEEEECCcc-
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED--CRARIWDLSLC-   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~--~~i~l~d~~~~-   89 (148)
                      .+..+++++.. +.++++-...+.|.+.+++..  .....+...-....+|++.|.+..|+...+.  +.|...++... 
T Consensus       472 ~P~GLAvD~~~-~~LY~tD~~~~~I~v~~ldG~--~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~  548 (791)
T 3m0c_C          472 APDGLAVDWIH-SNIYWTDSVLGTVSVADTKGV--KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD  548 (791)
T ss_dssp             CCCEEEEETTT-TEEEEEETTTTEEEEEETTSS--SEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC
T ss_pred             CcceeeeeecC-CcEEEEecCCCeEEEEeCCCC--eEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCc
Confidence            46788888763 456666556679999999865  3333333344568899999976666655542  67888888654 


Q ss_pred             ---c-c---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          90 ---F-I---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        90 ---~-~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                         + .   .....+++++.+..|..+...     ..+|..+|+.
T Consensus       549 ~~~lv~~~l~~P~GLavD~~~~~LYwaD~~-----~~~I~~~d~d  588 (791)
T 3m0c_C          549 IYSLVTENIQWPNGITLDLLSGRLYWVDSK-----LHSISSIDVN  588 (791)
T ss_dssp             EEEEECSSCSCEEEEEEETTTTEEEEEETT-----TTEEEEEETT
T ss_pred             eEEEEeCCCCCceEEEEecCCCeEEEEeCC-----CCcEEEEecC
Confidence               2 1   567889999877666666432     2357777664

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=95.52  E-value=0.54  Score=35.32  Aligned_cols=108  Identities=16%  Similarity=0.170  Sum_probs=68.3

Q ss_pred             ecCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCC----CCCEEEEEE-------ccCCCEEEEEeCCC
Q psy7062          11 AFGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGV----SKNVVEVGF-------QEDGKWMFTGGEDC   79 (148)
Q Consensus        11 ~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~----~~~i~~~~~-------sp~~~~l~~~~~~~   79 (148)
                      +..+..++|+|...+.++++....+.|++.|++.+  . +..+...    ......++|       +++|..|+..+..+
T Consensus       138 ~~~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~--~-v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~  214 (496)
T 3kya_A          138 FSDNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNR--M-LSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYD  214 (496)
T ss_dssp             CCSEEEEEEETTEEEEEEEEEETEEEEEEEETTTT--E-EEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCC
T ss_pred             cCCCCEEEEccCCCCEEEEEECCCCeEEEEECCCC--E-EEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCC
Confidence            34577899998433556666444467888899876  3 3333211    235889999       99999776666553


Q ss_pred             -------cEEEEECCc-c-cc-----------ccceEEEEccCCCEEEEE-ecCCceecCeeEEEeecC
Q psy7062          80 -------RARIWDLSL-C-FI-----------QQVNALRITPDKQLLASA-EELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        80 -------~i~l~d~~~-~-~~-----------~~i~~~~~sp~~~~l~~~-~~d~~~~~~~~i~~~d~~  127 (148)
                             .+.+++... + +.           .....++++|++..|..+ ..++      +|..+|+.
T Consensus       215 ~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g------~V~r~d~~  277 (496)
T 3kya_A          215 GKGDESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKG------QVFRLDLV  277 (496)
T ss_dssp             TTGGGEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTT------EEEEECHH
T ss_pred             CCcccCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCC------EEEEEecc
Confidence                   255665444 1 21           446778889955544444 4433      79999986

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=95.51  E-value=0.093  Score=40.45  Aligned_cols=94  Identities=14%  Similarity=0.124  Sum_probs=57.6

Q ss_pred             EEEEEeCCCCccEEEEEecCC-----------eEEEEeCCCCCCCceEEe--cCCCCCE-EEEEEccCCCEEEEEeCC--
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQ-----------HIRMYDFGSNNPNPVINC--EGVSKNV-VEVGFQEDGKWMFTGGED--   78 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~-----------~v~~~d~~~~~~~~~~~~--~~~~~~i-~~~~~sp~~~~l~~~~~~--   78 (148)
                      .++.|+. ..+++++.|+.++           .+.+||..+.  ......  ..+..+. .++...|+++.++.|+.+  
T Consensus       402 ~av~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~--~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~  478 (656)
T 1k3i_A          402 NAVMYDA-VKGKILTFGGSPDYQDSDATTNAHIITLGEPGTS--PNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRG  478 (656)
T ss_dssp             EEEEEET-TTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSC--CEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBC
T ss_pred             ceEeccC-CCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCC--CeeEEccCCCCCCcccCCeEECCCCCEEEECCcccC
Confidence            4444443 2377888877532           6788888776  333222  2222222 344567899999988754  


Q ss_pred             ---------CcEEEEECCcc-c---c------ccceEEEEccCCCEEEEEec
Q psy7062          79 ---------CRARIWDLSLC-F---I------QQVNALRITPDKQLLASAEE  111 (148)
Q Consensus        79 ---------~~i~l~d~~~~-~---~------~~i~~~~~sp~~~~l~~~~~  111 (148)
                               ..+.+||..+. +   .      ....+..+.|+++.++.|+.
T Consensus       479 ~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~  530 (656)
T 1k3i_A          479 IPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG  530 (656)
T ss_dssp             CTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred             cCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence                     46899998776 1   1      22223456789999998884

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=95.51  E-value=0.5  Score=34.93  Aligned_cols=107  Identities=13%  Similarity=0.177  Sum_probs=71.5

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCc----------eEEecC------CCCCEEEEEEccC---CCEEEE
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNP----------VINCEG------VSKNVVEVGFQED---GKWMFT   74 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~----------~~~~~~------~~~~i~~~~~sp~---~~~l~~   74 (148)
                      ...+..+++  |.+||. ..+..|.+-.+..+....          .+.+.-      ....|..+.|+|-   +..+++
T Consensus        68 i~qlvlSps--G~lLAl-~g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVV  144 (452)
T 3pbp_A           68 TFHVISSTS--GDLLCL-FNDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVV  144 (452)
T ss_dssp             TCEEEECTT--SSEEEE-ECSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEE
T ss_pred             eeEEEECCC--CCEEEE-ecCCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEE
Confidence            345666676  999999 667899998988331011          112221      2467999999995   458999


Q ss_pred             EeCCCcEEEEECCcc-------------cc-----ccceEEEEccCCCEEEEEe--cCCceecCeeEEEeecCCC
Q psy7062          75 GGEDCRARIWDLSLC-------------FI-----QQVNALRITPDKQLLASAE--ELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        75 ~~~~~~i~l~d~~~~-------------~~-----~~i~~~~~sp~~~~l~~~~--~d~~~~~~~~i~~~d~~~~  129 (148)
                      -..|++|++||+...             |.     ..+.+++|.+++-.|...+  +.|      .|+-.-.--|
T Consensus       145 LtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~G------DIYAlcP~LP  213 (452)
T 3pbp_A          145 LKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGG------DIFAFYPFLP  213 (452)
T ss_dssp             EETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSC------EEEEESSCCC
T ss_pred             EecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCC------CEEEECCCCc
Confidence            999999999999863             11     4577888888776555544  545      5654443333

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=95.40  E-value=0.42  Score=33.29  Aligned_cols=110  Identities=6%  Similarity=-0.119  Sum_probs=65.8

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCC--CCceEEecCCCCCEEEEEEccCCC-EEEEEeCCCcEEEEECCcc
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNN--PNPVINCEGVSKNVVEVGFQEDGK-WMFTGGEDCRARIWDLSLC   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~--~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~~~~~i~l~d~~~~   89 (148)
                      .+..++|++.. +.++.+-...+.|..++++...  ......+...-....++++.+.+. .+.+-...+.|.++|+...
T Consensus        31 ~p~g~~~d~~~-~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~  109 (316)
T 1ijq_A           31 NVVALDTEVAS-NRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV  109 (316)
T ss_dssp             SEEEEEEETTT-TEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred             ceEEEEEEeCC-CEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC
Confidence            46788888763 4555664556789999988610  022222322224567889987554 4455566788999998754


Q ss_pred             -----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          90 -----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        90 -----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                           +.   .....++++|.+..|..+....    ..+|..++..
T Consensus       110 ~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~----~~~I~~~~~d  151 (316)
T 1ijq_A          110 KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT----PAKIKKGGLN  151 (316)
T ss_dssp             SEEEEEECTTCCEEEEEEETTTTEEEEEECSS----SCEEEEEETT
T ss_pred             ceEEEEECCCCCcceEEeCCCCCEEEEEccCC----CCeEEEEcCC
Confidence                 11   5678899998666555554321    1356666654

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=95.32  E-value=0.48  Score=33.55  Aligned_cols=108  Identities=8%  Similarity=-0.020  Sum_probs=69.5

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCC-EEEEEeCCCcEEEEECCcc--
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGK-WMFTGGEDCRARIWDLSLC--   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~~~~~i~l~d~~~~--   89 (148)
                      .+..++|++.. +.++.+-...+.|..++++..  ..............++++.+.+. .+.+-...+.|.+.++...  
T Consensus        74 ~~~~l~~d~~~-~~ly~~D~~~~~I~r~~~~g~--~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~  150 (349)
T 3v64_C           74 NAIALDFHHRR-ELVFWSDVTLDRILRANLNGS--NVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR  150 (349)
T ss_dssp             CEEEEEEETTT-TEEEEEETTTTEEEEEETTSC--SCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred             ceEEEEEeccc-cEEEEEeccCCceEEEecCCC--CceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCce
Confidence            35678888753 455555446678999999876  43333332334567889998555 4455555678999998754  


Q ss_pred             ---cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          90 ---FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        90 ---~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                         +.   .....++++|.+..|..+....    ..+|..++..
T Consensus       151 ~~l~~~~l~~P~~iavdp~~g~ly~td~~~----~~~I~r~~~d  190 (349)
T 3v64_C          151 KVLLWQSLEKPRAIALHPMEGTIYWTDWGN----TPRIEASSMD  190 (349)
T ss_dssp             EEEECTTCSCEEEEEEETTTTEEEEEECSS----SCEEEEEETT
T ss_pred             EEEEeCCCCCcceEEEecCcCeEEEeccCC----CCEEEEEeCC
Confidence               21   5678899999666655554321    1367777755

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=95.26  E-value=0.51  Score=33.55  Aligned_cols=96  Identities=9%  Similarity=0.056  Sum_probs=65.5

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceE-EecCC------CCCEEEEEE---ccCCCEEEEEe-------
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVI-NCEGV------SKNVVEVGF---QEDGKWMFTGG-------   76 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~-~~~~~------~~~i~~~~~---sp~~~~l~~~~-------   76 (148)
                      +++.+|+... +.++++.-..++|..||...+  .... .+..-      ...+.++.|   .|+++++++..       
T Consensus        15 PE~~~wd~~~-g~~~vs~l~~g~V~~~~~~~~--~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~   91 (334)
T 2p9w_A           15 PEDTIYDRTR-QVFYQSNLYKGRIEVYNPKTQ--SHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNF   91 (334)
T ss_dssp             CSCEEEETTT-TEEEEEETTTTEEEEECTTTC--CEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCT
T ss_pred             CcCccCcCCC-CEEEEEeccCCEEEEEcCCCC--eEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccc
Confidence            5789999862 555555336899999999855  2222 23221      124689999   68888777544       


Q ss_pred             ------CCCcEEEEECC---cc-------cc----c----------cceEEEEccCCCEEEEEecC
Q psy7062          77 ------EDCRARIWDLS---LC-------FI----Q----------QVNALRITPDKQLLASAEEL  112 (148)
Q Consensus        77 ------~~~~i~l~d~~---~~-------~~----~----------~i~~~~~sp~~~~l~~~~~d  112 (148)
                            .+..+..||+.   ++       |.    .          ....++..++|+..++.+..
T Consensus        92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~  157 (334)
T 2p9w_A           92 ADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALG  157 (334)
T ss_dssp             TSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEES
T ss_pred             cccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCC
Confidence                  25779999998   44       21    2          36788999999988887764

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=95.16  E-value=0.45  Score=33.87  Aligned_cols=94  Identities=10%  Similarity=-0.021  Sum_probs=58.7

Q ss_pred             cCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEec---CCCCCEEEEEEccC----CCEEEEEeC---C---
Q psy7062          12 FGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCE---GVSKNVVEVGFQED----GKWMFTGGE---D---   78 (148)
Q Consensus        12 ~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~---~~~~~i~~~~~sp~----~~~l~~~~~---~---   78 (148)
                      ..+..++|+++  +.++++ ..++.|.++|. .+. +.+..+.   ........++++|+    +...++-+.   +   
T Consensus        29 ~~P~~ia~~pd--G~l~V~-e~~g~I~~~d~-~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~  103 (354)
T 3a9g_A           29 EVPWSIAPLGG--GRYLVT-ERPGRLVLISP-SGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHI  103 (354)
T ss_dssp             SCEEEEEEEET--TEEEEE-ETTTEEEEECS-SCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCE
T ss_pred             CCCeEEEEcCC--CeEEEE-eCCCEEEEEeC-CCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCc
Confidence            45788999998  777777 77799999873 341 2222221   12356889999997    444444332   2   


Q ss_pred             -CcEEEEECCcc----------cc-------ccceEEEEccCCCEEEEEe
Q psy7062          79 -CRARIWDLSLC----------FI-------QQVNALRITPDKQLLASAE  110 (148)
Q Consensus        79 -~~i~l~d~~~~----------~~-------~~i~~~~~sp~~~~l~~~~  110 (148)
                       ..|..|+....          +.       +....+.|.|+|.++++.+
T Consensus       104 ~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G  153 (354)
T 3a9g_A          104 RNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG  153 (354)
T ss_dssp             EEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred             ceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence             45666665431          11       3456799999998766644

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=95.15  E-value=0.45  Score=35.16  Aligned_cols=98  Identities=12%  Similarity=0.134  Sum_probs=59.3

Q ss_pred             ecCcEEEEEeCCCCccEEEEEecCC-eEEEEeCCCCCCCceEEecC------CCCCEEEEEEccC----CCEEEEEeC--
Q psy7062          11 AFGQISTVFDSKHLVEMVAALGGYQ-HIRMYDFGSNNPNPVINCEG------VSKNVVEVGFQED----GKWMFTGGE--   77 (148)
Q Consensus        11 ~~~~~~~~~~~~~~~~~l~~~~~d~-~v~~~d~~~~~~~~~~~~~~------~~~~i~~~~~sp~----~~~l~~~~~--   77 (148)
                      +..+..++|+++  +.++++ ...+ .|.+++..++....+..+..      .......|+++|+    +.+.++-+.  
T Consensus        26 l~~P~~~a~~pd--G~l~V~-e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~  102 (454)
T 1cru_A           26 LNKPHALLWGPD--NQIWLT-ERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKN  102 (454)
T ss_dssp             CSSEEEEEECTT--SCEEEE-ETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEEC
T ss_pred             CCCceEEEEcCC--CcEEEE-EcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccc
Confidence            345678889998  888888 5554 78888765552122333321      2356779999995    444444332  


Q ss_pred             ----------CCcEEEEECCcc----------cc-------ccceEEEEccCCCEEEEEec
Q psy7062          78 ----------DCRARIWDLSLC----------FI-------QQVNALRITPDKQLLASAEE  111 (148)
Q Consensus        78 ----------~~~i~l~d~~~~----------~~-------~~i~~~~~sp~~~~l~~~~~  111 (148)
                                ...|.-++....          +.       +....+.|.|||.+.++.+.
T Consensus       103 ~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd  163 (454)
T 1cru_A          103 PKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD  163 (454)
T ss_dssp             TTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred             cCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence                      124554544211          21       45678999999987776554

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=95.14  E-value=0.22  Score=34.13  Aligned_cols=86  Identities=14%  Similarity=0.141  Sum_probs=55.9

Q ss_pred             cEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc---ccceEE
Q psy7062          26 EMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI---QQVNAL   97 (148)
Q Consensus        26 ~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~---~~i~~~   97 (148)
                      ..+..++.++.+..+|.+ +  +.+.........+.++...+++. +..++.++.+..+|.. +     +.   ..+.++
T Consensus       108 ~~l~v~t~~~~l~~~d~~-g--~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~  182 (330)
T 3hxj_A          108 DILYVTSMDGHLYAINTD-G--TEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAA  182 (330)
T ss_dssp             TEEEEECTTSEEEEECTT-S--CEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCC
T ss_pred             CEEEEEecCCEEEEEcCC-C--CEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeee
Confidence            344555778899999988 6  55555554444555666666777 4456677889999988 4     11   445566


Q ss_pred             EEccCCCEEEEEecCCceecCeeEEEee
Q psy7062          98 RITPDKQLLASAEELSCCYCGAAVFVYN  125 (148)
Q Consensus        98 ~~sp~~~~l~~~~~d~~~~~~~~i~~~d  125 (148)
                      ...+++..++.+   +      .+..+|
T Consensus       183 ~~d~~g~l~v~t---~------~l~~~d  201 (330)
T 3hxj_A          183 SIGKDGTIYFGS---D------KVYAIN  201 (330)
T ss_dssp             EECTTCCEEEES---S------SEEEEC
T ss_pred             EEcCCCEEEEEe---C------EEEEEC
Confidence            666777755544   3      466666

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=95.04  E-value=0.45  Score=36.31  Aligned_cols=50  Identities=8%  Similarity=-0.107  Sum_probs=32.8

Q ss_pred             CCcEEEEECCcc-----cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCccee
Q psy7062          78 DCRARIWDLSLC-----FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVV  133 (148)
Q Consensus        78 ~~~i~l~d~~~~-----~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~  133 (148)
                      ++.+.-||+.++     ..  .+.........+..++.++.|+      .++.||.++.+...
T Consensus       465 ~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg------~l~A~D~~tG~~lW  521 (582)
T 1flg_A          465 VGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDG------YFKAFDAKSGKELW  521 (582)
T ss_dssp             SEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTS------EEEEEETTTCCEEE
T ss_pred             cceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCC------cEEEEECCCCCEEE
Confidence            577889999887     11  2222222223566777788877      89999988776554

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=94.99  E-value=0.5  Score=32.54  Aligned_cols=60  Identities=15%  Similarity=0.075  Sum_probs=44.0

Q ss_pred             ceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----cc--ccceEEEEccCCCEEEEE
Q psy7062          49 PVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----FI--QQVNALRITPDKQLLASA  109 (148)
Q Consensus        49 ~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----~~--~~i~~~~~sp~~~~l~~~  109 (148)
                      .+..+.. .....+++|+++++.+++...++.|..||....    +.  ..+..++++++++.+++.
T Consensus        24 ~~~~~p~-~~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~~~~~p~gia~~~dG~l~vad   89 (306)
T 2p4o_A           24 IITSFPV-NTFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHATVEGKVSGLAFTSNGDLVATG   89 (306)
T ss_dssp             EEEEECT-TCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEECSSEEEEEEECTTSCEEEEE
T ss_pred             EeEeCCC-CCCcceEEECCCCCEEEEeCCCCeEEEECCCCceEEEEeCCCCceeEEEcCCCcEEEEe
Confidence            3444542 356789999999997777667889999998765    22  667889999999865544

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=94.95  E-value=0.062  Score=41.97  Aligned_cols=107  Identities=7%  Similarity=-0.093  Sum_probs=65.1

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeC--CCcEEEEECCcc--
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE--DCRARIWDLSLC--   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~--~~~i~l~d~~~~--   89 (148)
                      +..+++++.. +.++++-...+.|.+++++..  .....+.........+++.|.+..|+....  .+.|..+++...  
T Consensus       455 P~glavD~~~-g~LY~tD~~~~~I~v~d~dg~--~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~  531 (699)
T 1n7d_A          455 PDGLAVDWIH-SNIYWTDSVLGTVSVADTKGV--KRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI  531 (699)
T ss_dssp             CCCEECCCSS-SBCEECCTTTSCEEEEBSSSC--CEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC
T ss_pred             cceEEEEeeC-CcEEEEeccCCeEEEEecCCC--ceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe
Confidence            4567777543 455555345678999998765  322223222345678899997665555443  267777776543  


Q ss_pred             --c-c---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062          90 --F-I---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        90 --~-~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                        + .   .....++|+|++..|..+...     ..+|..+|+..
T Consensus       532 ~~l~~~~l~~PnGlavd~~~~~LY~aD~~-----~~~I~~~d~dG  571 (699)
T 1n7d_A          532 YSLVTENIQWPNGITLDLLSGRLYWVDSK-----LHSISSIDVNG  571 (699)
T ss_dssp             CEESCSSCSSCCCEEECTTTCCEEEEETT-----TTEEEEECSSS
T ss_pred             eEEEeCCCCCccEEEEeccCCEEEEEecC-----CCeEEEEccCC
Confidence              2 1   556789999976655555431     23677787653

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=94.77  E-value=0.22  Score=37.88  Aligned_cols=73  Identities=10%  Similarity=0.018  Sum_probs=46.1

Q ss_pred             CCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc--ccc--eEEEEccCCC
Q psy7062          34 YQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI--QQV--NALRITPDKQ  104 (148)
Q Consensus        34 d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~--~~i--~~~~~sp~~~  104 (148)
                      ++.+..||..++  +.+..... ...+.+..+...+..++.++.++.++.+|.+++     +.  ..+  .-+.+..+++
T Consensus       443 ~g~l~a~D~~tG--~~~W~~~~-~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~  519 (571)
T 2ad6_A          443 MGQIRAFDLTTG--KAKWTKWE-KFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGK  519 (571)
T ss_dssp             CEEEEEECTTTC--CEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred             CCeEEEEECCCC--CEEEEecC-CCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCE
Confidence            468999999988  66666642 222222223345667777899999999999988     22  222  2234556777


Q ss_pred             EEEEE
Q psy7062         105 LLASA  109 (148)
Q Consensus       105 ~l~~~  109 (148)
                      +++..
T Consensus       520 ~yv~~  524 (571)
T 2ad6_A          520 QYIGS  524 (571)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            55544

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=94.69  E-value=0.16  Score=38.73  Aligned_cols=72  Identities=17%  Similarity=0.142  Sum_probs=46.5

Q ss_pred             CCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc--ccceE--EEEccCCC
Q psy7062          34 YQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI--QQVNA--LRITPDKQ  104 (148)
Q Consensus        34 d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~--~~i~~--~~~sp~~~  104 (148)
                      ++.+..||+.++  +.+........ +..-.....+..++.++.|+.++.||.+++     ++  ..+.+  +.|..+|+
T Consensus       465 ~G~l~A~D~~tG--~~~W~~~~~~~-~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~  541 (582)
T 1flg_A          465 VGSLRAMDPVSG--KVVWEHKEHLP-LWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGE  541 (582)
T ss_dssp             SEEEEEECTTTC--CEEEEEEESSC-CCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred             cceEEEEECCCC--CEEEEecCCCC-CcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCE
Confidence            578999999998  66666543221 111122234677778999999999999988     22  33332  56667887


Q ss_pred             EEEE
Q psy7062         105 LLAS  108 (148)
Q Consensus       105 ~l~~  108 (148)
                      +.++
T Consensus       542 qYv~  545 (582)
T 1flg_A          542 QYLG  545 (582)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            4444

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=94.61  E-value=0.79  Score=32.48  Aligned_cols=94  Identities=9%  Similarity=0.013  Sum_probs=58.7

Q ss_pred             cCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEec---CCCCCEEEEEEccC---CCEE-EEEeCC-----C
Q psy7062          12 FGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCE---GVSKNVVEVGFQED---GKWM-FTGGED-----C   79 (148)
Q Consensus        12 ~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~---~~~~~i~~~~~sp~---~~~l-~~~~~~-----~   79 (148)
                      ..+..++|+++  +.++++ ...+.|.+++  .+....+..+.   ........++++|+   +..+ ++-...     +
T Consensus        31 ~~P~~ia~~pd--G~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~  105 (352)
T 2ism_A           31 EVPWALAFLPD--GGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRN  105 (352)
T ss_dssp             SCEEEEEECTT--SCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEE
T ss_pred             CCceEEEEcCC--CeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCcc
Confidence            35778899988  777777 7779999998  33112222221   12356899999998   4444 433322     5


Q ss_pred             cEEEEECCcc--------cc---------ccceEEEEccCCCEEEEEe
Q psy7062          80 RARIWDLSLC--------FI---------QQVNALRITPDKQLLASAE  110 (148)
Q Consensus        80 ~i~l~d~~~~--------~~---------~~i~~~~~sp~~~~l~~~~  110 (148)
                      .|..++....        +.         +....++|.|+|.+.++.+
T Consensus       106 ~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G  153 (352)
T 2ism_A          106 QVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG  153 (352)
T ss_dssp             EEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred             EEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence            6777776531        11         2346899999997666544

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=94.22  E-value=0.42  Score=32.73  Aligned_cols=77  Identities=9%  Similarity=0.029  Sum_probs=50.5

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc---ccceE
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI---QQVNA   96 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~---~~i~~   96 (148)
                      +.++ .++.++.+..+|.+ +  +.+..+......+..+...+++...+..   +.+..+| .++     +.   ..+.+
T Consensus       148 g~l~-vgt~~~~l~~~d~~-g--~~~~~~~~~~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~~~~~~  219 (330)
T 3hxj_A          148 GTIY-VGSNDNYLYAINPD-G--TEKWRFKTNDAITSAASIGKDGTIYFGS---DKVYAIN-PDGTEKWNFYAGYWTVTR  219 (330)
T ss_dssp             SCEE-EECTTSEEEEECTT-S--CEEEEEECSSCCCSCCEECTTCCEEEES---SSEEEEC-TTSCEEEEECCSSCCCSC
T ss_pred             CEEE-EEcCCCEEEEECCC-C--CEeEEEecCCCceeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEEEEccCCcceec
Confidence            5544 44777899999998 6  5665555445556667777778755544   7888888 554     11   44667


Q ss_pred             EEEccCCCEEEEE
Q psy7062          97 LRITPDKQLLASA  109 (148)
Q Consensus        97 ~~~sp~~~~l~~~  109 (148)
                      +...+++...+.+
T Consensus       220 ~~~~~~g~l~v~t  232 (330)
T 3hxj_A          220 PAISEDGTIYVTS  232 (330)
T ss_dssp             CEECTTSCEEEEE
T ss_pred             eEECCCCeEEEEc
Confidence            7777777654443

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=94.20  E-value=0.56  Score=31.57  Aligned_cols=92  Identities=10%  Similarity=-0.093  Sum_probs=60.4

Q ss_pred             ecCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCE--------EEEEEccCCCEEEEEeCCCcEE
Q psy7062          11 AFGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNV--------VEVGFQEDGKWMFTGGEDCRAR   82 (148)
Q Consensus        11 ~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i--------~~~~~sp~~~~l~~~~~~~~i~   82 (148)
                      +.+...++|+|+  +.+.++  .++.+.-.+..+.  .....+. ....|        .++-+.|+|.+.++  .|+.|.
T Consensus        40 w~~~~~laf~P~--G~LYaV--~~G~Ly~~~~~t~--~~~~W~~-s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iy  110 (236)
T 1tl2_A           40 WSNFKFLFLSPG--GELYGV--LNDKIYKGTPPTH--DNDNWMG-RAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLY  110 (236)
T ss_dssp             CTTCSEEEECTT--SCEEEE--ETTEEEEESCCCS--TTCCHHH-HCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEE
T ss_pred             cccceeEEECCC--ccEEEE--eCCeEEEECCCCC--Ccccccc-cccEecccccccceEEEECCCCCEEEe--CCCEEE
Confidence            445568999995  777777  5677666565442  2221111 12222        67788999998877  458888


Q ss_pred             EEECCcc-----cc----------ccceEEEEccCCCEEEEEecCC
Q psy7062          83 IWDLSLC-----FI----------QQVNALRITPDKQLLASAEELS  113 (148)
Q Consensus        83 l~d~~~~-----~~----------~~i~~~~~sp~~~~l~~~~~d~  113 (148)
                      -++-.+.     +.          ..+..+.+.|+|.+.+..  |+
T Consensus       111 r~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg  154 (236)
T 1tl2_A          111 KASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQ  154 (236)
T ss_dssp             EESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TT
T ss_pred             EeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CC
Confidence            7776443     11          467889999999987777  55

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=94.19  E-value=0.97  Score=31.79  Aligned_cols=94  Identities=14%  Similarity=0.033  Sum_probs=61.6

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-c--c------ccce
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-F--I------QQVN   95 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-~--~------~~i~   95 (148)
                      +..+..++.++.+..+|.+++  +.+.....  .....+..  ++..++.++.++.+..+|..++ .  .      ....
T Consensus       239 ~~~v~~~~~~g~l~~~d~~tG--~~~w~~~~--~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~  312 (376)
T 3q7m_A          239 NGVVFALAYNGNLTALDLRSG--QIMWKREL--GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLT  312 (376)
T ss_dssp             TTEEEEECTTSCEEEEETTTC--CEEEEECC--CCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCC
T ss_pred             CCEEEEEecCcEEEEEECCCC--cEEeeccC--CCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCccc
Confidence            345566577889999999988  66655542  23333333  4667777888999999999887 1  1      1111


Q ss_pred             EEEEccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062          96 ALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV  132 (148)
Q Consensus        96 ~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~  132 (148)
                      ....  .+..|+.++.++      .++.+|..+.+..
T Consensus       313 ~~~~--~~~~l~v~~~~g------~l~~~d~~tG~~~  341 (376)
T 3q7m_A          313 SPVL--YNGNLVVGDSEG------YLHWINVEDGRFV  341 (376)
T ss_dssp             CCEE--ETTEEEEECTTS------EEEEEETTTCCEE
T ss_pred             CCEE--ECCEEEEEeCCC------eEEEEECCCCcEE
Confidence            1222  345677777766      7999998876644

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=94.00  E-value=1.2  Score=32.16  Aligned_cols=110  Identities=6%  Similarity=-0.111  Sum_probs=67.1

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCC--CCceEEecCCCCCEEEEEEccC-CCEEEEEeCCCcEEEEECCcc
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNN--PNPVINCEGVSKNVVEVGFQED-GKWMFTGGEDCRARIWDLSLC   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~--~~~~~~~~~~~~~i~~~~~sp~-~~~l~~~~~~~~i~l~d~~~~   89 (148)
                      .+..++|++.. +.++.+-...+.|..++++...  ......+........++++.+. ++++.+-...+.|.+.++...
T Consensus       113 ~~~~l~~d~~~-~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~  191 (400)
T 3p5b_L          113 NVVALDTEVAS-NRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV  191 (400)
T ss_dssp             CEEEEEEETTT-TEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTC
T ss_pred             cceEEeeeecc-CceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCC
Confidence            45778888763 4555553456789888987631  0223333334456889999984 455555556788999998765


Q ss_pred             -----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          90 -----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        90 -----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                           +.   .....++++|.+..|..+....    ...|...+..
T Consensus       192 ~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~----~~~I~~~~~d  233 (400)
T 3p5b_L          192 KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT----PAKIKKGGLN  233 (400)
T ss_dssp             SEEEEEECSSCCEEEEEEETTTTEEEEEECSS----SCCEEEEETT
T ss_pred             ceEEEEeCCCCCcceEEEecccCeEEEEeCCC----CCEEEEEeCC
Confidence                 21   5578899999666666554321    1256666654

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=93.96  E-value=0.95  Score=30.84  Aligned_cols=108  Identities=8%  Similarity=0.018  Sum_probs=63.5

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCC-CceEEec------CCCCCEEEEEEccCCCEEEEEeCCCcEEEEE
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNP-NPVINCE------GVSKNVVEVGFQEDGKWMFTGGEDCRARIWD   85 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~-~~~~~~~------~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d   85 (148)
                      +...+++..+  +.++++.-.++.+.++++..... ..+....      .......+++|+|++..+.++.......+|.
T Consensus        71 D~EGIa~~~~--g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~  148 (255)
T 3qqz_A           71 DLETIEYIGD--NQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYK  148 (255)
T ss_dssp             SEEEEEECST--TEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEE
T ss_pred             ChHHeEEeCC--CEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEE
Confidence            4677788765  66666634556888888876521 1122221      1245579999999987666665554444444


Q ss_pred             CCc----c----c---------c-ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          86 LSL----C----F---------I-QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        86 ~~~----~----~---------~-~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                      +..    .    +         . ..+..++++|....++..+...     ..+..+|..
T Consensus       149 ~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s-----~~L~~~d~~  203 (255)
T 3qqz_A          149 VNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHES-----RALQEVTLV  203 (255)
T ss_dssp             EESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTT-----TEEEEECTT
T ss_pred             EcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCC-----CeEEEEcCC
Confidence            421    0    1         1 4568899999655444444422     266677755

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=93.91  E-value=1.2  Score=31.92  Aligned_cols=108  Identities=10%  Similarity=0.126  Sum_probs=71.5

Q ss_pred             cEEEEE--eCCCCccEEEEEecCCeEEEEeCCC---C--CCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEEC
Q psy7062          14 QISTVF--DSKHLVEMVAALGGYQHIRMYDFGS---N--NPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL   86 (148)
Q Consensus        14 ~~~~~~--~~~~~~~~l~~~~~d~~v~~~d~~~---~--~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~   86 (148)
                      +..+++  ++.....++.+...++.+..|++..   +  ..+.++++.. .+.+..+.+.+....|+.+-++.-|+.+|.
T Consensus       130 pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da  208 (355)
T 3amr_A          130 VYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLYIAEEDEAIWKFSA  208 (355)
T ss_dssp             CCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEEEEETTTEEEEEEC
T ss_pred             eeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeEEEecccceEEEEeC
Confidence            344555  5543233555557889999998832   1  1145677763 567889999999999999999988888886


Q ss_pred             C-----cc-----c-----cccceEEEE--ccCCC-EEEEEecCCceecCeeEEEeecC
Q psy7062          87 S-----LC-----F-----IQQVNALRI--TPDKQ-LLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        87 ~-----~~-----~-----~~~i~~~~~--sp~~~-~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                      +     +.     +     ...+-.+++  .++++ +|++++.     +..+..+||..
T Consensus       209 ~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQ-----G~~s~~Vydr~  262 (355)
T 3amr_A          209 EPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQ-----GNSSYAIYDRQ  262 (355)
T ss_dssp             STTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEG-----GGTEEEEEESS
T ss_pred             CcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcC-----CCCEEEEEECC
Confidence            5     22     1     134566666  45666 6777764     23378899986

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=93.88  E-value=1.4  Score=32.33  Aligned_cols=72  Identities=10%  Similarity=0.087  Sum_probs=46.3

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEe-c-CCCCCEEEEEEccCCCEEEE-EeCCCcEEEEECC
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINC-E-GVSKNVVEVGFQEDGKWMFT-GGEDCRARIWDLS   87 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~-~-~~~~~i~~~~~sp~~~~l~~-~~~~~~i~l~d~~   87 (148)
                      .+..+++++.. +.+.++-..++.|..+|..++  .....+ . +.......++++|+++.|+. -...+.|+.++..
T Consensus       229 ~P~giavd~~~-G~lyv~d~~~~~V~~~d~~~g--~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d  303 (433)
T 4hw6_A          229 GAKTCAVHPQN-GKIYYTRYHHAMISSYDPATG--TLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN  303 (433)
T ss_dssp             SBCCCEECTTT-CCEEECBTTCSEEEEECTTTC--CEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred             CCCEEEEeCCC-CeEEEEECCCCEEEEEECCCC--eEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence            35667778732 667666456678999999866  432222 1 12233457999999995544 4556789998754

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=93.78  E-value=0.86  Score=32.33  Aligned_cols=97  Identities=13%  Similarity=0.053  Sum_probs=57.2

Q ss_pred             ecCcEEEEEeCCCCcc-EEEEEecCCeEEEEeCCCCCCCceEEe----cCCCCCEEEEEEccC----CCEEEEEeC----
Q psy7062          11 AFGQISTVFDSKHLVE-MVAALGGYQHIRMYDFGSNNPNPVINC----EGVSKNVVEVGFQED----GKWMFTGGE----   77 (148)
Q Consensus        11 ~~~~~~~~~~~~~~~~-~l~~~~~d~~v~~~d~~~~~~~~~~~~----~~~~~~i~~~~~sp~----~~~l~~~~~----   77 (148)
                      +..+..++|+++  ++ ++++ ...+.|++++.+....+.+..+    .........++++|+    +...++-+.    
T Consensus        17 l~~P~~i~~~pd--G~~l~V~-e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~   93 (353)
T 2g8s_A           17 LDHPWALAFLPD--NHGMLIT-LRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDD   93 (353)
T ss_dssp             ESSEEEEEECST--TCCEEEE-ETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSS
T ss_pred             CCCcEEEEEcCC--CCEEEEE-eCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCC
Confidence            456788999998  77 7777 7789999998543200111111    112345789999995    444444332    


Q ss_pred             ---CCcEEEEECCcc----------cc---------ccceEEEEccCCCEEEEEe
Q psy7062          78 ---DCRARIWDLSLC----------FI---------QQVNALRITPDKQLLASAE  110 (148)
Q Consensus        78 ---~~~i~l~d~~~~----------~~---------~~i~~~~~sp~~~~l~~~~  110 (148)
                         ...|..++....          +.         +....+.|.|+|.+.++.+
T Consensus        94 g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G  148 (353)
T 2g8s_A           94 GKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALG  148 (353)
T ss_dssp             SCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEEC
T ss_pred             CCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEEC
Confidence               224555555321          11         2246799999997655544

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=93.74  E-value=1.3  Score=31.70  Aligned_cols=109  Identities=12%  Similarity=0.073  Sum_probs=64.6

Q ss_pred             EEEEEeC--CCCccEEEEEec--CCeEEEEeCCCCC--CCceEEecCC-CCCEEEEEEccCCCEEEEEeC----------
Q psy7062          15 ISTVFDS--KHLVEMVAALGG--YQHIRMYDFGSNN--PNPVINCEGV-SKNVVEVGFQEDGKWMFTGGE----------   77 (148)
Q Consensus        15 ~~~~~~~--~~~~~~l~~~~~--d~~v~~~d~~~~~--~~~~~~~~~~-~~~i~~~~~sp~~~~l~~~~~----------   77 (148)
                      ..+.+..  +....++++-..  ++++.+|+++...  ...+..+.+. -...+.+.+.++|.+.++...          
T Consensus       115 hGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~  194 (355)
T 3sre_A          115 HGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSW  194 (355)
T ss_dssp             EEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHH
T ss_pred             eeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccc
Confidence            4444443  222335555233  3577787776531  1223344432 246889999999998877641          


Q ss_pred             -------CCcEEEEECCcc--c-c--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062          78 -------DCRARIWDLSLC--F-I--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        78 -------~~~i~l~d~~~~--~-~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                             .+.+.-+|....  + .  ...+.++|+||++.|..+...     ..+|..|++..
T Consensus       195 e~~~~~~~g~vyr~d~~~~~~~~~~l~~pNGia~spDg~~lYvadt~-----~~~I~~~~~~~  252 (355)
T 3sre_A          195 EMHLGLAWSFVTYYSPNDVRVVAEGFDFANGINISPDGKYVYIAELL-----AHKIHVYEKHA  252 (355)
T ss_dssp             HHHTTCCCEEEEEECTTCCEEEEEEESSEEEEEECTTSSEEEEEEGG-----GTEEEEEEECT
T ss_pred             hhhccCCccEEEEEECCeEEEeecCCcccCcceECCCCCEEEEEeCC-----CCeEEEEEECC
Confidence                   234444554322  2 2  667889999999988877642     23788888763

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=93.73  E-value=0.87  Score=34.96  Aligned_cols=50  Identities=6%  Similarity=-0.129  Sum_probs=31.4

Q ss_pred             CCcEEEEECCcc-c--c----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCccee
Q psy7062          78 DCRARIWDLSLC-F--I----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVV  133 (148)
Q Consensus        78 ~~~i~l~d~~~~-~--~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~  133 (148)
                      .+.+.-||+.++ .  +    .+...-...-.+..++.++.|+      .++.+|.++.+...
T Consensus       452 ~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt~dg------~l~A~D~~tG~~lW  508 (599)
T 1w6s_A          452 LGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDG------YLKARDSDTGDLLW  508 (599)
T ss_dssp             CEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTS------EEEEEETTTCCEEE
T ss_pred             cCeEEEEECCCCCEEeEecCCCCccCcceEecCCEEEEECCCC------eEEEEECCCCCEEE
Confidence            367888888877 1  1    1122212233566677788877      89999988776544

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=93.16  E-value=2.3  Score=32.80  Aligned_cols=109  Identities=11%  Similarity=-0.080  Sum_probs=69.3

Q ss_pred             cCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEE-EEEeCCCcEEEEECCcc-
Q psy7062          12 FGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWM-FTGGEDCRARIWDLSLC-   89 (148)
Q Consensus        12 ~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l-~~~~~~~~i~l~d~~~~-   89 (148)
                      ..+..++|++.. +.++.+-..++.|..++++..  .....+........++++.+.+..| .+-...+.|.+.++... 
T Consensus        37 ~~~~~l~~d~~~-~~lywtD~~~~~I~r~~~~g~--~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~  113 (628)
T 4a0p_A           37 KEASALDFDVTD-NRIYWTDISLKTISRAFMNGS--ALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQH  113 (628)
T ss_dssp             SCEEEEEEETTT-TEEEEEETTTTEEEEEETTSC--SCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTT
T ss_pred             CceEEEEEECCC-CEEEEEECCCCeEEEEECCCC--CcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCc
Confidence            346788899863 555566456778999999865  3333333223456789998765544 44455678999998654 


Q ss_pred             ----c-c--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          90 ----F-I--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        90 ----~-~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                          + .  .....++++|....|..+....    ..+|...+..
T Consensus       114 ~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~----~~~I~r~~~d  154 (628)
T 4a0p_A          114 RQVLVWKDLDSPRALALDPAEGFMYWTEWGG----KPKIDRAAMD  154 (628)
T ss_dssp             CEEEECSSCCCEEEEEEETTTTEEEEEECSS----SCEEEEEETT
T ss_pred             EEEEEeCCCCCcccEEEccCCCeEEEeCCCC----CCEEEEEeCC
Confidence                2 1  5678999998655555554321    2256666554

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=92.45  E-value=2.9  Score=32.16  Aligned_cols=109  Identities=8%  Similarity=-0.085  Sum_probs=70.3

Q ss_pred             cCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeC--CCcEEEEECCcc
Q psy7062          12 FGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE--DCRARIWDLSLC   89 (148)
Q Consensus        12 ~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~--~~~i~l~d~~~~   89 (148)
                      ..+..+++|+.. ++++++-...+.|.+.+++..  .........-....+|++.|.+..|+..++  .+.|...++...
T Consensus        84 ~~P~GlAvD~~~-~~ly~~d~~~~~I~v~~~dG~--~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~  160 (619)
T 3s94_A           84 LSPDGLACDWLG-EKLYWTDSETNRIEVSNLDGS--LRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS  160 (619)
T ss_dssp             SCEEEEEEETTT-TEEEEEETTTTEEEEEETTSC--SCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred             CCcCeEEEEecC-CEEEEEeCCCCEEEEEECCCC--CEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCC
Confidence            356789999863 556666456679999999875  322233233455678999997666655554  356666666543


Q ss_pred             ----c-c---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062          90 ----F-I---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        90 ----~-~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                          + .   .....+++++++..|..+...     ..+|..+|+..
T Consensus       161 ~~~~l~~~~~~~P~Glald~~~~~LY~aD~~-----~~~I~~~~~dG  202 (619)
T 3s94_A          161 SRFIIINSEIYWPNGLTLDYEEQKLYWADAK-----LNFIHKSNLDG  202 (619)
T ss_dssp             SCEEEECSSCSSEEEEEEETTTTEEEEEETT-----TCCEEEESSSC
T ss_pred             ceEEEEeCCCCCCcEEEEEccCCEEEEEeCC-----CCeEEEecCCC
Confidence                2 1   567889999877766666532     23677777653

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=92.22  E-value=2.3  Score=30.37  Aligned_cols=98  Identities=12%  Similarity=0.015  Sum_probs=60.8

Q ss_pred             ecCcEEEEEeCCCCccEEEEEec-CCeEEEEeCCCCCCCceEEec----CCCCCEEEEEEccC----CCEEEEEe--CCC
Q psy7062          11 AFGQISTVFDSKHLVEMVAALGG-YQHIRMYDFGSNNPNPVINCE----GVSKNVVEVGFQED----GKWMFTGG--EDC   79 (148)
Q Consensus        11 ~~~~~~~~~~~~~~~~~l~~~~~-d~~v~~~d~~~~~~~~~~~~~----~~~~~i~~~~~sp~----~~~l~~~~--~~~   79 (148)
                      +..+..++|.++  +.++++ .. .+.|++++.+.+....+..+.    ........|+++|+    +...++-+  .++
T Consensus        31 L~~P~~ia~~pd--G~llVt-er~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~  107 (347)
T 3das_A           31 LNSPWGLAPLPG--GDLLVS-SRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDN  107 (347)
T ss_dssp             CSSEEEEEECTT--SCEEEE-ETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSE
T ss_pred             CCCceEEEEcCC--CcEEEE-EecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCC
Confidence            335678888888  788888 55 889999887655212222221    12456889999995    44444322  344


Q ss_pred             cEEEEECCc------c-------cc-------ccceEEEEccCCCEEEEEec
Q psy7062          80 RARIWDLSL------C-------FI-------QQVNALRITPDKQLLASAEE  111 (148)
Q Consensus        80 ~i~l~d~~~------~-------~~-------~~i~~~~~sp~~~~l~~~~~  111 (148)
                      .|.-|.+..      .       +.       +....+.|.|||.+.++.+.
T Consensus       108 ~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd  159 (347)
T 3das_A          108 RIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGE  159 (347)
T ss_dssp             EEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBC
T ss_pred             EEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECC
Confidence            555555543      1       11       44566999999987777553

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=92.20  E-value=1.8  Score=29.50  Aligned_cols=104  Identities=11%  Similarity=0.105  Sum_probs=56.9

Q ss_pred             ccEEEEEecC----CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC------CcEEEEECCcc----c
Q psy7062          25 VEMVAALGGY----QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED------CRARIWDLSLC----F   90 (148)
Q Consensus        25 ~~~l~~~~~d----~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~------~~i~l~d~~~~----~   90 (148)
                      +.+++.|+.+    ..+.+||+.+.....+..+.........+  .-+++.++.|+.+      ..+..||..+.    +
T Consensus        56 ~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~  133 (306)
T 3ii7_A           56 NVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAAC--AAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTK  133 (306)
T ss_dssp             TEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEE--EETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEE
T ss_pred             CEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEE--EECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeC
Confidence            5677776654    57889999876222222222212222222  2367777777654      46889999876    1


Q ss_pred             ---c-ccceEEEEccCCCEEEEEecCCceec---CeeEEEeecCCCc
Q psy7062          91 ---I-QQVNALRITPDKQLLASAEELSCCYC---GAAVFVYNSCYPA  130 (148)
Q Consensus        91 ---~-~~i~~~~~sp~~~~l~~~~~d~~~~~---~~~i~~~d~~~~~  130 (148)
                         . .+.......-+++.++.|+.++....   ...+..||+.+.+
T Consensus       134 ~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~  180 (306)
T 3ii7_A          134 PSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATET  180 (306)
T ss_dssp             CCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTE
T ss_pred             CCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCe
Confidence               1 22222222236777777765432111   3468889987653

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=92.12  E-value=3.7  Score=32.66  Aligned_cols=110  Identities=5%  Similarity=-0.127  Sum_probs=65.7

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCC--CceEEecCCCCCEEEEEEccCCCEE-EEEeCCCcEEEEECCcc
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNP--NPVINCEGVSKNVVEVGFQEDGKWM-FTGGEDCRARIWDLSLC   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~--~~~~~~~~~~~~i~~~~~sp~~~~l-~~~~~~~~i~l~d~~~~   89 (148)
                      ....++|++.. +.++++-...+.|..+++.....  .....+...-....+|++.+.+..| .+-...+.|.+.++...
T Consensus       425 ~~~gl~~d~~~-~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~  503 (791)
T 3m0c_C          425 NVVALDTEVAS-NRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV  503 (791)
T ss_dssp             SEEEEEEETTT-TEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred             ceEEEeecccC-CeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCC
Confidence            35677888753 45555545567888888875310  2233333234556789999877555 45555688999999765


Q ss_pred             ----cc----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          90 ----FI----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        90 ----~~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                          +.    .....++++|.+..|..+....    ..+|...+..
T Consensus       504 ~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~----~~~I~~~~~d  545 (791)
T 3m0c_C          504 KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT----PAKIKKGGLN  545 (791)
T ss_dssp             SEEEEEECTTCCEEEEEEETTTTEEEEEECSS----SCEEEEEETT
T ss_pred             eEEEEEeCCCCCcceEEEecCCCCEEEecCCC----CCeEEEEecC
Confidence                21    5578899999766665554311    1256666654

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=92.07  E-value=3.3  Score=31.94  Aligned_cols=108  Identities=10%  Similarity=-0.065  Sum_probs=70.4

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeC--CCcEEEEECCcc-
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE--DCRARIWDLSLC-   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~--~~~i~l~d~~~~-   89 (148)
                      .+..+|+|+.. +++.++-...+.|.+.+++..  .........-....++++.|....|+...+  .+.|...++... 
T Consensus        81 ~P~GlAvD~~~-~~LY~tD~~~~~I~v~~~dG~--~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~  157 (628)
T 4a0p_A           81 YPEGMAVDWLG-KNLYWADTGTNRIEVSKLDGQ--HRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE  157 (628)
T ss_dssp             CCCEEEEETTT-TEEEEEETTTTEEEEEETTST--TCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS
T ss_pred             CcceEEEEeCC-CEEEEEECCCCEEEEEecCCC--cEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc
Confidence            46788888763 455566455678999999865  322223234456789999996655655554  456777777544 


Q ss_pred             ----cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062          90 ----FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        90 ----~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                          +.  .....++++++++.|..+...     ...|..+|+..
T Consensus       158 ~~~l~~~~~~P~GlalD~~~~~LY~aD~~-----~~~I~~~d~dG  197 (628)
T 4a0p_A          158 RTTLVPNVGRANGLTIDYAKRRLYWTDLD-----TNLIESSNMLG  197 (628)
T ss_dssp             CEEEECSCSSEEEEEEETTTTEEEEEETT-----TTEEEEEETTS
T ss_pred             eEEEECCCCCcceEEEccccCEEEEEECC-----CCEEEEEcCCC
Confidence                22  667889999977777666542     23677777653

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=91.76  E-value=2.2  Score=29.22  Aligned_cols=103  Identities=10%  Similarity=-0.042  Sum_probs=57.0

Q ss_pred             ccEEEEEecC-----CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC-----CcEEEEECCcc----c
Q psy7062          25 VEMVAALGGY-----QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED-----CRARIWDLSLC----F   90 (148)
Q Consensus        25 ~~~l~~~~~d-----~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~-----~~i~l~d~~~~----~   90 (148)
                      +.+++.|+.+     ..+.+||+.+.....+..+.........+.+  ++++++.|+.+     ..+..||+.+.    +
T Consensus       169 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~  246 (308)
T 1zgk_A          169 RLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFV  246 (308)
T ss_dssp             TEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEEC
T ss_pred             CEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEEC
Confidence            5666666544     3588899887621222222211222222222  67777777654     56899999876    1


Q ss_pred             c----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          91 I----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        91 ~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                      .    .+.......-+++.++.|+.++.. ....+.+||+.+.+
T Consensus       247 ~~~p~~r~~~~~~~~~~~i~v~GG~~~~~-~~~~v~~yd~~~~~  289 (308)
T 1zgk_A          247 APMKHRRSALGITVHQGRIYVLGGYDGHT-FLDSVECYDPDTDT  289 (308)
T ss_dssp             CCCSSCCBSCEEEEETTEEEEECCBCSSC-BCCEEEEEETTTTE
T ss_pred             CCCCCCccceEEEEECCEEEEEcCcCCCc-ccceEEEEcCCCCE
Confidence            1    111112222367777777765522 23468899988654

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=91.03  E-value=2.1  Score=33.16  Aligned_cols=70  Identities=11%  Similarity=0.109  Sum_probs=49.4

Q ss_pred             EEEEeCCCCccEEEEEecCC-------------------eEEEEeCCCCCCCceEEecC--CC-------CCEEEEEEcc
Q psy7062          16 STVFDSKHLVEMVAALGGYQ-------------------HIRMYDFGSNNPNPVINCEG--VS-------KNVVEVGFQE   67 (148)
Q Consensus        16 ~~~~~~~~~~~~l~~~~~d~-------------------~v~~~d~~~~~~~~~~~~~~--~~-------~~i~~~~~sp   67 (148)
                      ..++++.  .++++.++.++                   .|..+|.+++  +.+..++.  |.       .......+..
T Consensus       234 ~~a~d~~--~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG--~~~W~~~~~~~~~wd~~~~~~~~~~d~~~  309 (668)
T 1kv9_A          234 SMAYDPE--LDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTG--KLAWHYQVTPGDSWDFTATQQITLAELNI  309 (668)
T ss_dssp             CEEEETT--TTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTC--CEEEEEESSTTCCSCCCCCSCEEEEEEEE
T ss_pred             ceEEcCC--CCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCC--ceeeEeecCCCccccccCCCCcEEEEecc
Confidence            3577776  56666666554                   4999999999  77776653  22       2333344455


Q ss_pred             CCC---EEEEEeCCCcEEEEECCcc
Q psy7062          68 DGK---WMFTGGEDCRARIWDLSLC   89 (148)
Q Consensus        68 ~~~---~l~~~~~~~~i~l~d~~~~   89 (148)
                      +|+   .++.++.+|.++++|..++
T Consensus       310 ~G~~~~~v~~~~~~G~l~~lD~~tG  334 (668)
T 1kv9_A          310 DGKPRKVLMQAPKNGFFYVLDRTNG  334 (668)
T ss_dssp             TTEEEEEEEECCTTSEEEEEETTTC
T ss_pred             CCcEEEEEEEECCCCEEEEEECCCC
Confidence            776   6888999999999999887

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=90.72  E-value=1.4  Score=33.81  Aligned_cols=74  Identities=15%  Similarity=0.043  Sum_probs=45.3

Q ss_pred             CCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc--cc--ceEEEEccCCC
Q psy7062          34 YQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI--QQ--VNALRITPDKQ  104 (148)
Q Consensus        34 d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~--~~--i~~~~~sp~~~  104 (148)
                      .+.+..||+.++  +.+..... .....+-.+...+..++.++.|+.++.||.+++     ++  ..  ..-+.|..+|+
T Consensus       452 ~G~l~A~D~~tG--~~~W~~~~-~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~  528 (599)
T 1w6s_A          452 LGQIKAYNAITG--DYKWEKME-RFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGT  528 (599)
T ss_dssp             CEEEEEECTTTC--CEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred             cCeEEEEECCCC--CEEeEecC-CCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCE
Confidence            467889999988  66666542 111111112335677777999999999999998     22  11  12245556776


Q ss_pred             E-EEEEe
Q psy7062         105 L-LASAE  110 (148)
Q Consensus       105 ~-l~~~~  110 (148)
                      + +++.+
T Consensus       529 qyv~~~~  535 (599)
T 1w6s_A          529 QYVAIYY  535 (599)
T ss_dssp             EEEEEEE
T ss_pred             EEEEEEc
Confidence            4 44443

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=90.62  E-value=0.74  Score=32.27  Aligned_cols=57  Identities=9%  Similarity=-0.056  Sum_probs=32.2

Q ss_pred             cEEEEECCcc-------cc-ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062          80 RARIWDLSLC-------FI-QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN  136 (148)
Q Consensus        80 ~i~l~d~~~~-------~~-~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~  136 (148)
                      .+.+||+.+.       +. .+....+..-+++.++.|+.++.......+.++++.+.+..+..+
T Consensus       286 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~  350 (357)
T 2uvk_A          286 STDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQNL  350 (357)
T ss_dssp             CCEEEECC---CEEEEECSSCCBSSEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC-
T ss_pred             eEEEEecCCCceeeCCCCCCCcccceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeeec
Confidence            4778998876       12 222233344578888888876532223467778888776665444

>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A

Probab=90.08  E-value=1.3  Score=34.00  Aligned_cols=63  Identities=11%  Similarity=0.022  Sum_probs=47.7

Q ss_pred             EEEEEEccCCCEEEEEeC-CCcEEEEECCcc-------c-----------c--ccceEEEEccCCCEEEEEecCCceecC
Q psy7062          60 VVEVGFQEDGKWMFTGGE-DCRARIWDLSLC-------F-----------I--QQVNALRITPDKQLLASAEELSCCYCG  118 (148)
Q Consensus        60 i~~~~~sp~~~~l~~~~~-~~~i~l~d~~~~-------~-----------~--~~i~~~~~sp~~~~l~~~~~d~~~~~~  118 (148)
                      .-++.++|||++++.++. +.++.++|+...       +           +  ......+|.++|....+..-|.     
T Consensus       325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidS-----  399 (638)
T 3sbq_A          325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDS-----  399 (638)
T ss_dssp             CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTT-----
T ss_pred             CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecc-----
Confidence            346788999998876554 789999999853       1           1  5678899999996555555655     


Q ss_pred             eeEEEeecCC
Q psy7062         119 AAVFVYNSCY  128 (148)
Q Consensus       119 ~~i~~~d~~~  128 (148)
                       +|..||+..
T Consensus       400 -qvvkWni~~  408 (638)
T 3sbq_A          400 -QVVKWNMEE  408 (638)
T ss_dssp             -EEEEEEHHH
T ss_pred             -eEEEEeccH
Confidence             899999864

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=89.77  E-value=1.7  Score=33.89  Aligned_cols=73  Identities=10%  Similarity=-0.104  Sum_probs=42.1

Q ss_pred             cEEEEEeCCCCccEEEEEecC-CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCE-EEEEeCCCcEEEEECCcc
Q psy7062          14 QISTVFDSKHLVEMVAALGGY-QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKW-MFTGGEDCRARIWDLSLC   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d-~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~-l~~~~~~~~i~l~d~~~~   89 (148)
                      +..+++++.. +.++++-... +.|.++++...  .........-....+|+++|++.. +++-...+.|..+|+...
T Consensus       498 P~giavDp~~-g~ly~td~~~~~~I~~~~~dG~--~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~  572 (699)
T 1n7d_A          498 PRAIVVDPVH-GFMYWTDWGTPAKIKKGGLNGV--DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG  572 (699)
T ss_dssp             CCCEECCSSS-SCCEECCCSSSCCEEBCCSSSC--CCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSS
T ss_pred             cceEEEccCC-CcEEEcccCCCCeEEEEeCCCC--CeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCC
Confidence            4566677652 4444442222 56777777654  222222222345678999997654 455556678999998643

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=89.68  E-value=6.2  Score=30.95  Aligned_cols=93  Identities=13%  Similarity=0.079  Sum_probs=61.5

Q ss_pred             CccEEEEEecCCeEEEEeCCCCCCCceEEec---------CCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----c
Q psy7062          24 LVEMVAALGGYQHIRMYDFGSNNPNPVINCE---------GVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----F   90 (148)
Q Consensus        24 ~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~---------~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----~   90 (148)
                      .+.+-+. +.++-+..||..++  . ...+.         .....|.++...++++.+..|+.++-+..+|..++    +
T Consensus       367 ~g~lWiG-t~~~Gl~~~~~~~~--~-~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~  442 (795)
T 4a2l_A          367 DKNLWIG-TNDGGLNLYNPITQ--R-FTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENF  442 (795)
T ss_dssp             TSCEEEE-ESSSCEEEECTTTC--C-EEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEE
T ss_pred             CCCEEEE-ECCCCeEEEcCCCC--c-EEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEe
Confidence            3666554 77778888998875  3 22221         12356889888888885556677777999998765    1


Q ss_pred             c--------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062          91 I--------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        91 ~--------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                      .        ..+.++...++++..+.+. +|       +..||..+
T Consensus       443 ~~~~~~l~~~~v~~i~~d~~g~lwigt~-~G-------l~~~~~~~  480 (795)
T 4a2l_A          443 NQRNSQLVNENVYAILPDGEGNLWLGTL-SA-------LVRFNPEQ  480 (795)
T ss_dssp             CTTTSCCSCSCEEEEEECSSSCEEEEES-SC-------EEEEETTT
T ss_pred             ecCCCCcCCCeeEEEEECCCCCEEEEec-Cc-------eeEEeCCC
Confidence            1        4577888777887655554 44       66666543

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=89.67  E-value=3.4  Score=27.97  Aligned_cols=103  Identities=11%  Similarity=0.006  Sum_probs=56.6

Q ss_pred             ccEEEEEecC-----CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC-----CcEEEEECCcc----c
Q psy7062          25 VEMVAALGGY-----QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED-----CRARIWDLSLC----F   90 (148)
Q Consensus        25 ~~~l~~~~~d-----~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~-----~~i~l~d~~~~----~   90 (148)
                      +.+++.|+.+     ..+.+||+.+.....+..+.........+  .-+++.++.|+.+     ..+.+||+.+.    +
T Consensus       160 ~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~  237 (301)
T 2vpj_A          160 GVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVA--LLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTV  237 (301)
T ss_dssp             TEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEE--EETTEEEEECCBCSSSBCCCEEEEETTTTEEEEE
T ss_pred             CEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEE--EECCEEEEEeCCCCCcccceEEEEeCCCCcEEEC
Confidence            5666766644     36888998876222222222111222222  2366777777664     46899999876    1


Q ss_pred             c----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          91 I----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        91 ~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                      .    .+....+..-+++.++.|+.++.. ....+..||+.+.+
T Consensus       238 ~~~p~~r~~~~~~~~~~~i~v~GG~~~~~-~~~~v~~yd~~~~~  280 (301)
T 2vpj_A          238 TSMTTPRCYVGATVLRGRLYAIAGYDGNS-LLSSIECYDPIIDS  280 (301)
T ss_dssp             CCCSSCCBSCEEEEETTEEEEECCBCSSS-BEEEEEEEETTTTE
T ss_pred             CCCCCcccceeEEEECCEEEEEcCcCCCc-ccccEEEEcCCCCe
Confidence            1    222222223377777777755421 12468899987654

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=89.13  E-value=3.8  Score=27.78  Aligned_cols=103  Identities=16%  Similarity=0.068  Sum_probs=56.3

Q ss_pred             ccEEEEEecC-------CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC-----CcEEEEECCcc---
Q psy7062          25 VEMVAALGGY-------QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED-----CRARIWDLSLC---   89 (148)
Q Consensus        25 ~~~l~~~~~d-------~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~-----~~i~l~d~~~~---   89 (148)
                      +.+++.|+.+       ..+.+||+.+.....+..+.........+  .-+++.++.|+.+     ..+.+||+.+.   
T Consensus       156 ~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~  233 (302)
T 2xn4_A          156 GLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVG--VLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWR  233 (302)
T ss_dssp             TEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEE--EETTEEEEECCBSSSSBCCCEEEEETTTTEEE
T ss_pred             CEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEE--EECCEEEEECCCCCCcccceEEEEeCCCCCEe
Confidence            4566665532       35888999876222222222111222222  2367777777654     46889999876   


Q ss_pred             -cc----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 -FI----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 -~~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                       +.    .+.......-+++.++.|+.++.. ....+.+||+.+.+
T Consensus       234 ~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~-~~~~v~~yd~~~~~  278 (302)
T 2xn4_A          234 QVADMNMCRRNAGVCAVNGLLYVVGGDDGSC-NLASVEYYNPTTDK  278 (302)
T ss_dssp             EECCCSSCCBSCEEEEETTEEEEECCBCSSS-BCCCEEEEETTTTE
T ss_pred             eCCCCCCccccCeEEEECCEEEEECCcCCCc-ccccEEEEcCCCCe
Confidence             11    222222223377777777765422 12468999988654

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=88.68  E-value=3.4  Score=31.03  Aligned_cols=73  Identities=7%  Similarity=-0.059  Sum_probs=46.4

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCC-------CCCC-C----c----eEE-ec-CCCCCEEEEEEccCCCEEEE
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFG-------SNNP-N----P----VIN-CE-GVSKNVVEVGFQEDGKWMFT   74 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~-------~~~~-~----~----~~~-~~-~~~~~i~~~~~sp~~~~l~~   74 (148)
                      .+..++.++.. +.++++-..++.|..+|++       ++.. .    .    ... +. ........++++|+|+.++.
T Consensus       248 ~p~giavdp~~-g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYv  326 (496)
T 3kya_A          248 QCNGATIHPIN-GELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYF  326 (496)
T ss_dssp             CCCCEEECTTT-CCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEE
T ss_pred             CceEEEEcCCC-CeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEE
Confidence            45667777742 6677775677789999997       5521 0    0    112 11 12345689999999996544


Q ss_pred             -EeCCCcEEEEEC
Q psy7062          75 -GGEDCRARIWDL   86 (148)
Q Consensus        75 -~~~~~~i~l~d~   86 (148)
                       -...+.|+.+|.
T Consensus       327 aD~~~h~I~kid~  339 (496)
T 3kya_A          327 GVINNHYFMRSDY  339 (496)
T ss_dssp             EETTTTEEEEEEE
T ss_pred             EeCCCCEEEEEec
Confidence             455678888554

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=87.42  E-value=6.2  Score=28.19  Aligned_cols=55  Identities=11%  Similarity=0.270  Sum_probs=39.1

Q ss_pred             CCCEEEEEEccCCCEEEEEe-CCCcEEEEECCcc--------cc--ccceEEEEcc-CCCEEEEEec
Q psy7062          57 SKNVVEVGFQEDGKWMFTGG-EDCRARIWDLSLC--------FI--QQVNALRITP-DKQLLASAEE  111 (148)
Q Consensus        57 ~~~i~~~~~sp~~~~l~~~~-~~~~i~l~d~~~~--------~~--~~i~~~~~sp-~~~~l~~~~~  111 (148)
                      -...++++|+||++.++.+. ..+.|+.|++...        +.  ...-.+++.+ +|++.+++..
T Consensus       220 l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~~~  286 (355)
T 3sre_A          220 FDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCHP  286 (355)
T ss_dssp             ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEEES
T ss_pred             CcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEecC
Confidence            35578999999998776654 5688999998632        21  4456678888 5887765543

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=87.03  E-value=5.4  Score=27.07  Aligned_cols=104  Identities=12%  Similarity=0.014  Sum_probs=56.5

Q ss_pred             ccEEEEEecC--CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC----CcEEEEECCcc----c---c
Q psy7062          25 VEMVAALGGY--QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED----CRARIWDLSLC----F---I   91 (148)
Q Consensus        25 ~~~l~~~~~d--~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~----~~i~l~d~~~~----~---~   91 (148)
                      +.+++.|+.+  ..+.+||..+.....+..+.........+  .-+++.++.|+.+    ..+..||..+.    +   .
T Consensus        12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p   89 (306)
T 3ii7_A           12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACV--FWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP   89 (306)
T ss_dssp             CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEE--EETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCS
T ss_pred             ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEE--EECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC
Confidence            3455565543  47899999876222222222212222222  2366777777654    57889999876    1   1


Q ss_pred             -ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          92 -QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        92 -~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                       .+.......-+++.++.|+.+........+..||..+.+
T Consensus        90 ~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~  129 (306)
T 3ii7_A           90 TPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTES  129 (306)
T ss_dssp             SCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTE
T ss_pred             ccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCc
Confidence             222222223377777777765222223468888977654

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=86.80  E-value=6.6  Score=27.89  Aligned_cols=103  Identities=10%  Similarity=0.043  Sum_probs=59.4

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEecCC-CCCEEEEEE--cc-CCCEEEEE-eCCCcEEEEECCcc-----cc--c
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGV-SKNVVEVGF--QE-DGKWMFTG-GEDCRARIWDLSLC-----FI--Q   92 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~-~~~i~~~~~--sp-~~~~l~~~-~~~~~i~l~d~~~~-----~~--~   92 (148)
                      +.+++.++.||.+.-+|.+++  +.+..++.. ...+....-  .+ ++..++.. ..||.+..+|..++     +.  .
T Consensus        10 ~~~V~v~t~dG~l~Ald~~tG--~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~   87 (339)
T 2be1_A           10 SDILIAADVEGGLHAVDRRNG--HIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQ   87 (339)
T ss_dssp             EEEEEEEETTSCEEEEETTTT--EEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHH
T ss_pred             CCEEEEEeCCCeEEEEECCCC--cEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccc
Confidence            456677799999999999998  778777643 122222110  01 22333333 57899999998777     11  1


Q ss_pred             cce--EEEEc-----------cCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          93 QVN--ALRIT-----------PDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        93 ~i~--~~~~s-----------p~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                      .+.  -+...           ..+..+++++.++      ++.-.|..+.+....+
T Consensus        88 lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g------~l~ald~~tG~~~W~~  137 (339)
T 2be1_A           88 LVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRT------IMYTINMLNGEIISAF  137 (339)
T ss_dssp             HHTTCSEEEECC----------CCEEEEECEEEE------EEEEEETTTCCEEEEE
T ss_pred             ceeccccccCCCceeecccccccCCEEEEEecCC------EEEEEECCCCcEEEEE
Confidence            010  01111           0345667777766      7777777766654433

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=86.49  E-value=6  Score=27.05  Aligned_cols=103  Identities=12%  Similarity=-0.006  Sum_probs=55.2

Q ss_pred             ccEEEEEecC--------CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeC-C-----CcEEEEECCcc-
Q psy7062          25 VEMVAALGGY--------QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE-D-----CRARIWDLSLC-   89 (148)
Q Consensus        25 ~~~l~~~~~d--------~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-~-----~~i~l~d~~~~-   89 (148)
                      +.+++.|+.+        ..+.+||..+...+.+..+.........  ...+++.++.|+. +     ..+..||..+. 
T Consensus        99 ~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~--~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~  176 (315)
T 4asc_A           99 NSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTV--LSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFE  176 (315)
T ss_dssp             TEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEE--EEETTEEEEECCBCTTSCBCCCEEEEETTTTE
T ss_pred             CEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeE--EEECCEEEEEeCCCCCCcccceEEEEeCCCCe
Confidence            4566665632        3588899987621222222211122222  2246677777765 2     46899999876 


Q ss_pred             ---cc----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 ---FI----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 ---~~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                         +.    .+....+..-+++.++.|+.++.. ....+..||+.+.+
T Consensus       177 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~yd~~~~~  223 (315)
T 4asc_A          177 WKELAPMQTARSLFGATVHDGRIIVAAGVTDTG-LTSSAEVYSITDNK  223 (315)
T ss_dssp             EEECCCCSSCCBSCEEEEETTEEEEEEEECSSS-EEEEEEEEETTTTE
T ss_pred             EEECCCCCCchhceEEEEECCEEEEEeccCCCC-ccceEEEEECCCCe
Confidence               11    222222223377777777765421 12368888887653

>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*

Probab=86.26  E-value=6.5  Score=30.22  Aligned_cols=63  Identities=17%  Similarity=0.101  Sum_probs=38.7

Q ss_pred             eecCcEEEEEeCCCCccEEEEEec------------CCeEEEEeCCCCCCCceEEecCC-CCCEEEEEEccCCCEEEEEe
Q psy7062          10 TAFGQISTVFDSKHLVEMVAALGG------------YQHIRMYDFGSNNPNPVINCEGV-SKNVVEVGFQEDGKWMFTGG   76 (148)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~l~~~~~------------d~~v~~~d~~~~~~~~~~~~~~~-~~~i~~~~~sp~~~~l~~~~   76 (148)
                      ++.++..++|+++  |.+.+.-..            ...+..++..++  +....+... ...+++++|+||++.|+...
T Consensus       474 ~fnsPDnL~fd~~--G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tG--el~~fl~~P~~aEpnGiafSPD~ktLfV~v  549 (592)
T 4a9v_A          474 MFNSPDGLGFDKA--GRLWILTDGDSSNAGDFAGMGNNQMLCADPATG--EIRRFMVGPIGCEVTGISFSPDQKTLFVGI  549 (592)
T ss_dssp             CCCCEEEEEECTT--CCEEEEECCCCCCSGGGTTCCSCEEEEECTTTC--CEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred             ccCCCCceEECCC--CCEEEEeCCCcCccccccccCCceEEEEeCCCC--eEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence            4566788999987  666663121            114555566555  433333332 35688899999888776653

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=86.06  E-value=5.7  Score=27.21  Aligned_cols=104  Identities=13%  Similarity=-0.007  Sum_probs=52.1

Q ss_pred             ccEEEEEec----CC-------eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC-------CcEEEEEC
Q psy7062          25 VEMVAALGG----YQ-------HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED-------CRARIWDL   86 (148)
Q Consensus        25 ~~~l~~~~~----d~-------~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~-------~~i~l~d~   86 (148)
                      +.+++.|+.    ++       .+.+||..+.....+..+...........  -+++.++.|+.+       ..+..||.
T Consensus        57 ~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~  134 (318)
T 2woz_A           57 NQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGE--VDDKIYVVAGKDLQTEASLDSVLCYDP  134 (318)
T ss_dssp             SCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEE--ETTEEEEEEEEBTTTCCEEEEEEEEET
T ss_pred             CEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEE--ECCEEEEEcCccCCCCcccceEEEEeC
Confidence            667777662    11       27778887652112212221112222222  266766666653       34788898


Q ss_pred             Ccc----c---c-ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          87 SLC----F---I-QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        87 ~~~----~---~-~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                      .+.    +   . .+....+...+++.++.|+.+........+..||+.+.+
T Consensus       135 ~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~  186 (318)
T 2woz_A          135 VAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGD  186 (318)
T ss_dssp             TTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTE
T ss_pred             CCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCE
Confidence            876    1   1 111112222477777777643211223468889987654

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=86.00  E-value=6.1  Score=26.69  Aligned_cols=103  Identities=10%  Similarity=-0.037  Sum_probs=56.9

Q ss_pred             ccEEEEEecC-----CeEEEEeCCCCC---CCceEEecCCCCCEEEEEEccCCCEEEEEeCC-----CcEEEEECCcc--
Q psy7062          25 VEMVAALGGY-----QHIRMYDFGSNN---PNPVINCEGVSKNVVEVGFQEDGKWMFTGGED-----CRARIWDLSLC--   89 (148)
Q Consensus        25 ~~~l~~~~~d-----~~v~~~d~~~~~---~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~-----~~i~l~d~~~~--   89 (148)
                      +.+++.|+.+     ..+.+||..+..   .+.+..+.........+.  .+++.++.|+.+     ..+.+||..+.  
T Consensus        63 ~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W  140 (301)
T 2vpj_A           63 DRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATT--LGDMIYVSGGFDGSRRHTSMERYDPNIDQW  140 (301)
T ss_dssp             TEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTTEE
T ss_pred             CEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEE--ECCEEEEEcccCCCcccceEEEEcCCCCeE
Confidence            5667776644     368899998873   222322222222222222  367777777654     35889998776  


Q ss_pred             --cc----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 --FI----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 --~~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                        +.    .+....+..-+++.++.|+.++.. ....+..||+.+.+
T Consensus       141 ~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~~d~~~~~  186 (301)
T 2vpj_A          141 SMLGDMQTAREGAGLVVASGVIYCLGGYDGLN-ILNSVEKYDPHTGH  186 (301)
T ss_dssp             EEEEECSSCCBSCEEEEETTEEEEECCBCSSC-BCCCEEEEETTTTE
T ss_pred             EECCCCCCCcccceEEEECCEEEEECCCCCCc-ccceEEEEeCCCCc
Confidence              11    222222222377777777765422 23468888977553

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=85.95  E-value=6.4  Score=26.89  Aligned_cols=104  Identities=12%  Similarity=0.042  Sum_probs=54.8

Q ss_pred             ccEEEEEec-C-----CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCC-----cEEEEECCcc----
Q psy7062          25 VEMVAALGG-Y-----QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDC-----RARIWDLSLC----   89 (148)
Q Consensus        25 ~~~l~~~~~-d-----~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~-----~i~l~d~~~~----   89 (148)
                      +.+++.|+. +     ..+.+||+.+.....+..+.........+  .-+++.++.|+.++     .+..||+.+.    
T Consensus       149 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~  226 (315)
T 4asc_A          149 DLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGAT--VHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAP  226 (315)
T ss_dssp             TEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEE--EETTEEEEEEEECSSSEEEEEEEEETTTTEEEE
T ss_pred             CEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEE--EECCEEEEEeccCCCCccceEEEEECCCCeEEE
Confidence            556677665 2     36889999876212222222111222222  23677777776543     5888999876    


Q ss_pred             cc----ccceEEEEccCCCEEEEEecCCce--------ecCeeEEEeecCCCc
Q psy7062          90 FI----QQVNALRITPDKQLLASAEELSCC--------YCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 ~~----~~i~~~~~sp~~~~l~~~~~d~~~--------~~~~~i~~~d~~~~~  130 (148)
                      +.    .+.......-+++.++.|+.++..        .....+..||+.+.+
T Consensus       227 ~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~  279 (315)
T 4asc_A          227 FEAFPQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKK  279 (315)
T ss_dssp             ECCCSSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTE
T ss_pred             CCCCCCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCCh
Confidence            11    222222222367777777653210        112457888987654

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=85.67  E-value=6.6  Score=26.77  Aligned_cols=103  Identities=13%  Similarity=-0.061  Sum_probs=54.6

Q ss_pred             ccEEEEEecC-----CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC-----CcEEEEECCcc----c
Q psy7062          25 VEMVAALGGY-----QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED-----CRARIWDLSLC----F   90 (148)
Q Consensus        25 ~~~l~~~~~d-----~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~-----~~i~l~d~~~~----~   90 (148)
                      +.+++.|+.+     ..+.+||+.+.....+..+.........+.+  +++.++.|+.+     ..+..||+.+.    +
T Consensus       122 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~  199 (308)
T 1zgk_A          122 GHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMI  199 (308)
T ss_dssp             TEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEC
T ss_pred             CEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeC
Confidence            5566665533     3688899887621222222211222222222  67777777654     46889998776    1


Q ss_pred             ---c-ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          91 ---I-QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        91 ---~-~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                         . .+....+..-+++.++.|+.++... ...+..||+.+.+
T Consensus       200 ~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~-~~~v~~yd~~~~~  242 (308)
T 1zgk_A          200 TAMNTIRSGAGVCVLHNCIYAAGGYDGQDQ-LNSVERYDVETET  242 (308)
T ss_dssp             CCCSSCCBSCEEEEETTEEEEECCBCSSSB-CCCEEEEETTTTE
T ss_pred             CCCCCccccceEEEECCEEEEEeCCCCCCc-cceEEEEeCCCCc
Confidence               1 1111111222677777776654211 3468899987543

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=85.24  E-value=7.1  Score=26.72  Aligned_cols=103  Identities=12%  Similarity=0.010  Sum_probs=53.4

Q ss_pred             ccEEEEEecC-------CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeC------CCcEEEEECCcc--
Q psy7062          25 VEMVAALGGY-------QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE------DCRARIWDLSLC--   89 (148)
Q Consensus        25 ~~~l~~~~~d-------~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~------~~~i~l~d~~~~--   89 (148)
                      +.+++.|+.+       ..+.+||..+.....+..+.........  ...+++.++.|+.      ...+..||+.+.  
T Consensus       110 ~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~--~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W  187 (318)
T 2woz_A          110 DKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNV--ISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDW  187 (318)
T ss_dssp             TEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEE--EEETTEEEEECCEESSSCBCCCEEEEETTTTEE
T ss_pred             CEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEE--EEECCEEEEEcCCCCCCCccceEEEEcCCCCEE
Confidence            5566666654       2588889887621222112111111112  2246777777654      245899999876  


Q ss_pred             --cc----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 --FI----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 --~~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                        +.    .+....+..-+++.++.|+.++.. ....+.+||+.+.+
T Consensus       188 ~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~yd~~~~~  233 (318)
T 2woz_A          188 KDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDG-LSASVEAFDLKTNK  233 (318)
T ss_dssp             EEECCCSSCCBSCEEEEETTEEEEEEEEETTE-EEEEEEEEETTTCC
T ss_pred             EECCCCCCCcccceEEEECCEEEEEcCcCCCC-ccceEEEEECCCCe
Confidence              11    111111222367777777654321 12367888877554

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=85.09  E-value=6.9  Score=26.48  Aligned_cols=103  Identities=17%  Similarity=0.042  Sum_probs=54.8

Q ss_pred             ccEEEEEecCC-----eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC-------CcEEEEECCcc---
Q psy7062          25 VEMVAALGGYQ-----HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED-------CRARIWDLSLC---   89 (148)
Q Consensus        25 ~~~l~~~~~d~-----~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~-------~~i~l~d~~~~---   89 (148)
                      +.+++.|+.++     .+.+||+.+.....+..+.........+  .-+++.++.|+.+       ..+..||+.+.   
T Consensus       109 ~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~  186 (302)
T 2xn4_A          109 GLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVG--VVGGLLYAVGGYDVASRQCLSTVECYNATTNEWT  186 (302)
T ss_dssp             TEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEE--EETTEEEEECCEETTTTEECCCEEEEETTTTEEE
T ss_pred             CEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEE--EECCEEEEEeCCCCCCCccccEEEEEeCCCCcEE
Confidence            56667766543     5888898876212222222111222222  2366766766542       45889999876   


Q ss_pred             -c---c-ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 -F---I-QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 -~---~-~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                       +   . .+.......-+++.++.|+.++... ...+..||+.+.+
T Consensus       187 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~-~~~~~~yd~~~~~  231 (302)
T 2xn4_A          187 YIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLV-RKSVEVYDPTTNA  231 (302)
T ss_dssp             EECCCSSCCBSCEEEEETTEEEEECCBSSSSB-CCCEEEEETTTTE
T ss_pred             ECCCCccccccccEEEECCEEEEECCCCCCcc-cceEEEEeCCCCC
Confidence             1   1 1111122223677777777654221 2368899987543

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=83.74  E-value=11  Score=27.87  Aligned_cols=102  Identities=10%  Similarity=0.114  Sum_probs=60.6

Q ss_pred             ecCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCC-CCceEEecC---------CCCCEEEEEEccC----CCEEEEEe
Q psy7062          11 AFGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNN-PNPVINCEG---------VSKNVVEVGFQED----GKWMFTGG   76 (148)
Q Consensus        11 ~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~-~~~~~~~~~---------~~~~i~~~~~sp~----~~~l~~~~   76 (148)
                      +..+..++|.|+..+++|++ ...+.|++++.+... ...+..+..         .......|+++|+    +.+.++-+
T Consensus        13 L~~P~~~a~~pdG~~rl~V~-er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt   91 (463)
T 2wg3_C           13 LRQPVGALHSGDGSQRLFIL-EKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYT   91 (463)
T ss_dssp             ESSEEEEECCSSSSCCEEEE-ETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEE
T ss_pred             CCCceEEEECCCCCeEEEEE-eCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEe
Confidence            45677888888844458888 888999999764320 112222221         1346789999996    44444432


Q ss_pred             C--C----------CcEEEEECCc----------c---cc-------ccceEEEEccCCCEEEEEecCC
Q psy7062          77 E--D----------CRARIWDLSL----------C---FI-------QQVNALRITPDKQLLASAEELS  113 (148)
Q Consensus        77 ~--~----------~~i~l~d~~~----------~---~~-------~~i~~~~~sp~~~~l~~~~~d~  113 (148)
                      .  +          ..|.-|.+..          .   +.       +....+.|.|||.+.++.+..+
T Consensus        92 ~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~  160 (463)
T 2wg3_C           92 TNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM  160 (463)
T ss_dssp             ECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred             CCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence            2  1          1333344421          0   11       5567799999998777766543

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=82.49  E-value=16  Score=28.54  Aligned_cols=105  Identities=10%  Similarity=0.054  Sum_probs=58.9

Q ss_pred             ccEEEEEecCC------eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCC--cEEEEECCcc----cc-
Q psy7062          25 VEMVAALGGYQ------HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDC--RARIWDLSLC----FI-   91 (148)
Q Consensus        25 ~~~l~~~~~d~------~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~--~i~l~d~~~~----~~-   91 (148)
                      +.+++.|+.++      .+.+||..+.....+..+......... ..-.+++.++.|+.++  .+.+||..+.    +. 
T Consensus       452 ~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~-~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~  530 (695)
T 2zwa_A          452 NQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSA-CSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTP  530 (695)
T ss_dssp             TEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEE-EECTTSCEEEECCBCSSCSEEEEETTTTEEEECCC
T ss_pred             CEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceE-EEEcCCEEEEECCCCCCCCEEEEECCCCceEEccC
Confidence            66777766432      588889887521222222211122222 2224788888887654  6899999876    11 


Q ss_pred             --------ccceEEEEccC-CCEEEEEecCCce-ecCeeEEEeecCCCc
Q psy7062          92 --------QQVNALRITPD-KQLLASAEELSCC-YCGAAVFVYNSCYPA  130 (148)
Q Consensus        92 --------~~i~~~~~sp~-~~~l~~~~~d~~~-~~~~~i~~~d~~~~~  130 (148)
                              ....++.+..+ ++.++.|+.+... .....+..||+.+.+
T Consensus       531 ~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~  579 (695)
T 2zwa_A          531 KDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN  579 (695)
T ss_dssp             SSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred             CCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence                    12223555554 6677777653211 123568899988766

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=82.30  E-value=16  Score=28.61  Aligned_cols=90  Identities=17%  Similarity=0.111  Sum_probs=58.6

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEec-----CCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-cc-------
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCE-----GVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-FI-------   91 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~-----~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-~~-------   91 (148)
                      +.+|-.|+.++-+.+||.+++  + ...+.     .....|.++...++|...+...  +-+..||..+. +.       
T Consensus       417 g~~lWigt~~~Gl~~~d~~~~--~-~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~--~Gl~~~~~~~~~~~~~~~~~~  491 (795)
T 4a2l_A          417 KSLVYIGTHAGGLSILHRNSG--Q-VENFNQRNSQLVNENVYAILPDGEGNLWLGTL--SALVRFNPEQRSFTTIEKEKD  491 (795)
T ss_dssp             TTEEEEEETTTEEEEEETTTC--C-EEEECTTTSCCSCSCEEEEEECSSSCEEEEES--SCEEEEETTTTEEEECCBCTT
T ss_pred             CCEEEEEeCcCceeEEeCCCC--c-EEEeecCCCCcCCCeeEEEEECCCCCEEEEec--CceeEEeCCCCeEEEcccccc
Confidence            663445477778999999876  3 33332     1345788998888888655543  45888888765 11       


Q ss_pred             ------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          92 ------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        92 ------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                            ..+.++...++++..+.+. .|       +..||..
T Consensus       492 ~~~~~~~~i~~i~~d~~g~lWigt~-~G-------l~~~~~~  525 (795)
T 4a2l_A          492 GTPVVSKQITTLFRDSHKRLWIGGE-EG-------LSVFKQE  525 (795)
T ss_dssp             CCBCCCCCEEEEEECTTCCEEEEES-SC-------EEEEEEE
T ss_pred             ccccCCceEEEEEECCCCCEEEEeC-Cc-------eEEEeCC
Confidence                  3577788888888666554 44       5556654

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=81.57  E-value=11  Score=26.18  Aligned_cols=107  Identities=8%  Similarity=-0.064  Sum_probs=61.0

Q ss_pred             CcEEEEEeCCCCccEEEEEe-cCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEE-eCCCcEEEEECCcc-
Q psy7062          13 GQISTVFDSKHLVEMVAALG-GYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTG-GEDCRARIWDLSLC-   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~-~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~-~~~~~i~l~d~~~~-   89 (148)
                      .+..+++++.. +.++.+-. ..+.|...+++..  .........-....+++++|++..|+.+ ...+.|..+|+... 
T Consensus       123 ~P~giavdp~~-g~ly~td~~~~~~I~r~~~dG~--~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~  199 (318)
T 3sov_A          123 QPRAIALDPSS-GFMYWTDWGEVPKIERAGMDGS--SRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN  199 (318)
T ss_dssp             SEEEEEEEGGG-TEEEEEECSSSCEEEEEETTSC--SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred             CccEEEEeCCC-CEEEEEecCCCCEEEEEEcCCC--CeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCc
Confidence            46778888752 44444421 2467888888754  2222222234567899999976655544 45678999998643 


Q ss_pred             ---c-c---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          90 ---F-I---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        90 ---~-~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                         + .   .....+++..  ..+..+..     ....|..+|..+.
T Consensus       200 ~~~~~~~~~~~P~glav~~--~~lywtd~-----~~~~V~~~~~~~G  239 (318)
T 3sov_A          200 RQAVVKGSLPHPFALTLFE--DILYWTDW-----STHSILACNKYTG  239 (318)
T ss_dssp             CEEEECSCCSCEEEEEEET--TEEEEEET-----TTTEEEEEETTTC
T ss_pred             eEEEecCCCCCceEEEEeC--CEEEEEec-----CCCeEEEEECCCC
Confidence               2 1   3455566532  23333332     1225666665443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	148
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	7e-07
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	1e-05
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	9e-07
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	4e-05
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	7e-04
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	7e-06
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	3e-04
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	1e-05
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	8e-04
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	4e-05
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	5e-05
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	5e-04
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	5e-04
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	6e-04
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	5e-04
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	7e-04
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	7e-04
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	0.002
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	0.003
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	0.004

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 45.1 bits (105), Expect = 7e-07
 Identities = 15/92 (16%), Positives = 32/92 (34%), Gaps = 8/92 (8%)

Query: 26  EMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWD 85
              A        R++D  ++      + + +   +  V F + G+ +  G +D    +WD
Sbjct: 239 NAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWD 298

Query: 86  LSLCFIQQ--------VNALRITPDKQLLASA 109
                           V+ L +T D   +A+ 
Sbjct: 299 ALKADRAGVLAGHDNRVSCLGVTDDGMAVATG 330

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 41.3 bits (95), Expect = 1e-05
 Identities = 12/60 (20%), Positives = 24/60 (40%), Gaps = 2/60 (3%)

Query: 26  EMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWD 85
            ++ A     +  ++D  +   +      G    V  +G  +DG  + TG  D   +IW+
Sbjct: 283 RLLLAGYDDFNCNVWD--ALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.7 bits (104), Expect = 9e-07
 Identities = 15/82 (18%), Positives = 29/82 (35%), Gaps = 10/82 (12%)

Query: 36  HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLCFIQQ-- 93
            I+M+D   +    ++   G    V  V F   GK++ +  +D   R+WD       +  
Sbjct: 228 TIKMWDV--STGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL 285

Query: 94  ------VNALRITPDKQLLASA 109
                 V +L        + + 
Sbjct: 286 NAHEHFVTSLDFHKTAPYVVTG 307

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.1 bits (92), Expect = 4e-05
 Identities = 9/60 (15%), Positives = 25/60 (41%), Gaps = 2/60 (3%)

Query: 26  EMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWD 85
           + + +    + +R++D+   N   +         V  + F +   ++ TG  D   ++W+
Sbjct: 260 KFILSCADDKTLRVWDY--KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.3 bits (82), Expect = 7e-04
 Identities = 10/42 (23%), Positives = 13/42 (30%)

Query: 46 NPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLS 87
           P       G    V  V F      M +  ED   ++WD  
Sbjct: 6  RPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYE 47

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 42.2 bits (97), Expect = 7e-06
 Identities = 13/68 (19%), Positives = 23/68 (33%)

Query: 26 EMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWD 85
            +A       + +Y+   N    V   +  +  V  V +  D   + T G D  A +W 
Sbjct: 20 TQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWT 79

Query: 86 LSLCFIQQ 93
          L     + 
Sbjct: 80 LKGRTWKP 87

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 37.1 bits (84), Expect = 3e-04
 Identities = 7/60 (11%), Positives = 17/60 (28%), Gaps = 10/60 (16%)

Query: 60  VVEVGFQEDGKWMFTGGEDCRARIWDLSLCFIQQ----------VNALRITPDKQLLASA 109
           +    + +D   +     +    I++ S     Q          V  +   PD   + + 
Sbjct: 10  ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTC 69

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 41.5 bits (95), Expect = 1e-05
 Identities = 7/61 (11%), Positives = 24/61 (39%)

Query: 27  MVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL 86
            +A       + +++    + +P+I     + + V      +   + + G+D   + W++
Sbjct: 238 RLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNV 297

Query: 87  S 87
            
Sbjct: 298 P 298

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 36.1 bits (81), Expect = 8e-04
 Identities = 9/34 (26%), Positives = 16/34 (47%)

Query: 54 EGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLS 87
           G +K +  +    DGK +F+   +     WD+S
Sbjct: 9  YGHNKAITALSSSADGKTLFSADAEGHINSWDIS 42

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (91), Expect = 4e-05
 Identities = 10/61 (16%), Positives = 23/61 (37%), Gaps = 3/61 (4%)

Query: 26  EMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWD 85
           +   + G    +  +          I     S +V+      D K++ TG  D +A +++
Sbjct: 278 KWFVSTGKDNLLNAWRTPYGAS---IFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYE 334

Query: 86  L 86
           +
Sbjct: 335 V 335

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (90), Expect = 5e-05
 Identities = 10/54 (18%), Positives = 18/54 (33%), Gaps = 7/54 (12%)

Query: 63  VGFQEDGKWMFTGGEDCRARIWDLS-------LCFIQQVNALRITPDKQLLASA 109
           + F   GKW  + G+D     W                V +  I+ D + + + 
Sbjct: 271 LKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTG 324

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (83), Expect = 5e-04
 Identities = 16/92 (17%), Positives = 29/92 (31%), Gaps = 14/92 (15%)

Query: 51  INCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLCFIQQ-------------VNAL 97
           IN     + V  V      + ++TGG+ C  ++WD+S    +              + + 
Sbjct: 45  INTLNHGEVVCAVTISNPTRHVYTGGKGC-VKVWDISHPGNKSPVSQLDCLNRDNYIRSC 103

Query: 98  RITPDKQLLASAEELSCCYCGAAVFVYNSCYP 129
           ++ PD   L    E S                
Sbjct: 104 KLLPDGCTLIVGGEASTLSIWDLAAPTPRIKA 135

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.7 bits (83), Expect = 5e-04
 Identities = 15/67 (22%), Positives = 28/67 (41%), Gaps = 8/67 (11%)

Query: 26  EMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVG------FQEDGKWMFTGGEDC 79
           E + +    + +  +D    + NP++  +G   +V+ V          +     TG  DC
Sbjct: 321 EYILSGSKDRGVLFWDK--KSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDC 378

Query: 80  RARIWDL 86
           +ARIW  
Sbjct: 379 KARIWKY 385

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.3 bits (82), Expect = 6e-04
 Identities = 12/88 (13%), Positives = 30/88 (34%), Gaps = 14/88 (15%)

Query: 36  HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL--------- 86
           + +      N+    +   G    V+ V   ++ +++ +G +D     WD          
Sbjct: 287 NNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLML 346

Query: 87  -----SLCFIQQVNALRITPDKQLLASA 109
                S+  +   N   + P+  + A+ 
Sbjct: 347 QGHRNSVISVAVANGSSLGPEYNVFATG 374

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 36.8 bits (83), Expect = 5e-04
 Identities = 9/70 (12%), Positives = 19/70 (27%), Gaps = 6/70 (8%)

Query: 17  TVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGG 76
           +V                  +  YD  +           V  N+ ++    D K +    
Sbjct: 280 SVPVHGEFAAYYQGAPEKGVLLKYDVKTRKV------TEVKNNLTDLRLSADRKTVMVRK 333

Query: 77  EDCRARIWDL 86
           +D +   + L
Sbjct: 334 DDGKIYTFPL 343

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 36.4 bits (82), Expect = 7e-04
 Identities = 9/82 (10%), Positives = 22/82 (26%), Gaps = 4/82 (4%)

Query: 32  GGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLS---- 87
             Y+     +    +   +I  E            E   +     E      +D+     
Sbjct: 251 DMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKV 310

Query: 88  LCFIQQVNALRITPDKQLLASA 109
                 +  LR++ D++ +   
Sbjct: 311 TEVKNNLTDLRLSADRKTVMVR 332

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.4 bits (82), Expect = 7e-04
 Identities = 10/73 (13%), Positives = 23/73 (31%), Gaps = 8/73 (10%)

Query: 65  FQEDGKWMFTGGEDCRARIWDLSLCFIQQ--------VNALRITPDKQLLASAEELSCCY 116
            Q +  ++ TG +D   R++D                V AL+      L++ + + +   
Sbjct: 19  LQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRV 78

Query: 117 CGAAVFVYNSCYP 129
                      + 
Sbjct: 79  WDIKKGCCTHVFE 91

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.8 bits (78), Expect = 0.002
 Identities = 11/38 (28%), Positives = 19/38 (50%), Gaps = 3/38 (7%)

Query: 51 INC-EGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLS 87
          I+C    SK V  + +  D + + +G  D   +IWD +
Sbjct: 8  IHCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKN 43

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 34.1 bits (76), Expect = 0.003
 Identities = 10/62 (16%), Positives = 22/62 (35%), Gaps = 1/62 (1%)

Query: 26  EMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDG-KWMFTGGEDCRARIW 84
           +  A +G    IR++D  ++        +       +VG    G   + +   D     +
Sbjct: 264 QKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFY 323

Query: 85  DL 86
           +L
Sbjct: 324 EL 325

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 33.9 bits (76), Expect = 0.004
 Identities = 9/58 (15%), Positives = 18/58 (31%), Gaps = 3/58 (5%)

Query: 30  ALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLS 87
             G    +  YD        +I    +      V F + G  ++ GG      +++  
Sbjct: 267 IYGVLNRLAKYDLKQRK---LIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPD 321

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	148
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.83
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	99.83
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	99.81
d1tbga_	340	beta1-subunit of the signal-transducing G protein	99.79
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	99.78
d1tbga_	340	beta1-subunit of the signal-transducing G protein	99.78
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	99.77
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	99.77
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	99.75
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	99.74
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	99.72
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.71
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	99.71
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	99.71
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	99.7
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	99.69
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	99.69
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	99.65
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	99.62
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.62
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.62
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.61
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	99.61
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.6
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	99.6
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.59
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	99.58
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.56
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.52
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.5
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.5
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.43
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.41
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.31
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.3
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.29
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.27
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.15
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.09
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.08
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	98.93
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	98.9
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	98.83
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	98.82
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	98.73
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	98.7
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	98.62
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	98.59
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	98.4
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	98.29
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	98.23
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	98.11
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	98.07
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	97.88
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	97.86
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	97.85
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	97.71
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	97.6
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	97.6
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	97.58
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	97.5
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	97.48
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	97.42
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	97.23
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	97.19
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	97.14
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	97.1
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	96.99
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	96.98
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	96.64
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	96.63
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	96.21
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	95.75
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	95.02
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	91.77
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	91.29
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	90.59
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	88.18
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	87.27
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	86.8
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	85.99
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	85.63
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	85.16
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	82.65
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	82.39
d1xipa_	381	Nucleoporin NUP159 {Baker's yeast (Saccharomyces c	81.51

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.83  E-value=7.4e-20  Score=130.73  Aligned_cols=111  Identities=13%  Similarity=0.160  Sum_probs=92.6

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEE------ecCCCCCEEEEEEccCCCEEEEEeCCCc---EEEEE
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVIN------CEGVSKNVVEVGFQEDGKWMFTGGEDCR---ARIWD   85 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~------~~~~~~~i~~~~~sp~~~~l~~~~~~~~---i~l~d   85 (148)
                      .+++|+++  + +|++|+.|++|++||++++  +.+..      +.+|...|.+++|+|+|++|++++.|++   +++||
T Consensus       188 ~~v~~s~d--g-~lasgs~Dg~i~iwd~~~~--~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd  262 (393)
T d1sq9a_         188 TSVDISER--G-LIATGFNNGTVQISELSTL--RPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYE  262 (393)
T ss_dssp             CEEEECTT--S-EEEEECTTSEEEEEETTTT--EEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEE
T ss_pred             EEEEECCC--C-EEEEEeCCCcEEEEeeccc--ccccccccccccccccceEEEcccccccceeeeecCCCCcceeeecc
Confidence            46777776  4 8899999999999999987  55543      3468899999999999999999998874   89999


Q ss_pred             CCcc-----c-------------c---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062          86 LSLC-----F-------------I---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN  136 (148)
Q Consensus        86 ~~~~-----~-------------~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~  136 (148)
                      ++++     +             .   ..|++++|+|++++|++++.|+      +|++||+.+.+.+..+.
T Consensus       263 ~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~------~v~vWd~~~g~~~~~l~  328 (393)
T d1sq9a_         263 TEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDG------KLRFWDVKTKERITTLN  328 (393)
T ss_dssp             TTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTS------EEEEEETTTTEEEEEEE
T ss_pred             cccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCC------EEEEEECCCCCEEEEEC
Confidence            9865     1             1   5699999999999999999999      99999999887665543

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.83  E-value=6.3e-20  Score=130.19  Aligned_cols=111  Identities=14%  Similarity=0.195  Sum_probs=96.7

Q ss_pred             cCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--
Q psy7062          12 FGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--   89 (148)
Q Consensus        12 ~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--   89 (148)
                      +...+++|+|+  +.+|++|+.|+.|++||.+++....+..+++|...|.+++|+|+++++++++.|+++++||+...  
T Consensus         8 ~pIt~~~~s~d--g~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~   85 (371)
T d1k8kc_           8 EPISCHAWNKD--RTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTW   85 (371)
T ss_dssp             SCCCEEEECTT--SSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEE
T ss_pred             CCeEEEEECCC--CCEEEEEeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeeccccc
Confidence            44679999998  89999999999999999987622356778899999999999999999999999999999999765  


Q ss_pred             -----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 -----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 -----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                           +.   ..+.+++|+|+++.|++++.|+      .+++|++....
T Consensus        86 ~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~------~i~i~~~~~~~  128 (371)
T d1k8kc_          86 KPTLVILRINRAARCVRWAPNEKKFAVGSGSR------VISICYFEQEN  128 (371)
T ss_dssp             EEEEECCCCSSCEEEEEECTTSSEEEEEETTS------SEEEEEEETTT
T ss_pred             ccccccccccccccccccccccccceeecccC------cceeeeeeccc
Confidence                 21   6799999999999999999988      89999876554

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.81  E-value=8.5e-19  Score=122.04  Aligned_cols=112  Identities=16%  Similarity=0.116  Sum_probs=98.1

Q ss_pred             cEEEEEeCCCCcc-EEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062          14 QISTVFDSKHLVE-MVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~-~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---   89 (148)
                      ..+++|+|+  ++ ++++|+.|+.|++||+++.  +....+..|...|.++.++|+++++++++.|+.+++||++..   
T Consensus       149 v~~v~~~~~--~~~~l~sgs~d~~i~i~d~~~~--~~~~~~~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~  224 (311)
T d1nr0a1         149 MNSVDFKPS--RPFRIISGSDDNTVAIFEGPPF--KFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKT  224 (311)
T ss_dssp             EEEEEECSS--SSCEEEEEETTSCEEEEETTTB--EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE
T ss_pred             ccccccccc--ceeeeccccccccccccccccc--ccccccccccccccccccCcccccccccccccccccccccccccc
Confidence            457778887  44 5888899999999999988  788888899999999999999999999999999999999875   


Q ss_pred             --cc----------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          90 --FI----------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        90 --~~----------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                        +.          ..|.+++|+|++++|++++.|+      .|++||+++.+....+
T Consensus       225 ~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg------~v~iwd~~t~~~~~~l  276 (311)
T d1nr0a1         225 GVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADK------TIKIWNVATLKVEKTI  276 (311)
T ss_dssp             EECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTS------EEEEEETTTTEEEEEE
T ss_pred             ccccccccccccccccccccccCCCCCEEEEEeCCC------eEEEEECCCCcEEEEE
Confidence              21          5689999999999999999988      9999999887765544

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.79  E-value=1.7e-18  Score=119.55  Aligned_cols=102  Identities=18%  Similarity=0.334  Sum_probs=89.4

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEe--cCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINC--EGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~--~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--   89 (148)
                      ..+++|+|+  +++|++++.|+.+++||++..  ..+..+  ..+...+..++|+|+++++++++.|+.|++||+.++  
T Consensus       229 i~~v~~~p~--~~~l~s~s~d~~i~~~~~~~~--~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~  304 (340)
T d1tbga_         229 INAICFFPN--GNAFATGSDDATCRLFDLRAD--QELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADR  304 (340)
T ss_dssp             EEEEEECTT--SSEEEEEETTSCEEEEETTTT--EEEEEECCTTCCSCEEEEEECSSSCEEEEEETTSCEEEEETTTCCE
T ss_pred             eEEEEECCC--CCEEEEEeCCCeEEEEeeccc--ccccccccccccCceEEEEECCCCCEEEEEECCCEEEEEECCCCcE
Confidence            357788886  889999999999999999987  555544  346678999999999999999999999999999887  


Q ss_pred             ---cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEee
Q psy7062          90 ---FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYN  125 (148)
Q Consensus        90 ---~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d  125 (148)
                         +.   .+|.+++|+|++++|++++.|+      .|++||
T Consensus       305 ~~~~~~H~~~V~~l~~s~d~~~l~s~s~Dg------~v~iWd  340 (340)
T d1tbga_         305 AGVLAGHDNRVSCLGVTDDGMAVATGSWDS------FLKIWN  340 (340)
T ss_dssp             EEEECCCSSCEEEEEECTTSSCEEEEETTS------CEEEEC
T ss_pred             EEEEcCCCCCEEEEEEeCCCCEEEEEccCC------EEEEeC
Confidence               33   7899999999999999999998      999997

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=5e-18  Score=118.66  Aligned_cols=103  Identities=16%  Similarity=0.179  Sum_probs=90.9

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..+++|+++  ++++++++.|+.+++||++++  + ......|...|.+++|+|+++++++++.|+.+++||+.++    
T Consensus       227 i~~l~~~~~--~~~l~~~~~d~~i~i~d~~~~--~-~~~~~~~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~~~~~  301 (337)
T d1gxra_         227 IFSLGYCPT--GEWLAVGMESSNVEVLHVNKP--D-KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIF  301 (337)
T ss_dssp             EEEEEECTT--SSEEEEEETTSCEEEEETTSS--C-EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred             eEEEEEccc--ccccceecccccccccccccc--c-cccccccccccceEEECCCCCEEEEEeCCCeEEEEECCCCCEEE
Confidence            356777777  889999999999999999987  4 4455679999999999999999999999999999999887    


Q ss_pred             -cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          90 -FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        90 -~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                       +.  ..+.+++|+|++++|++++.|+      +|++||+-
T Consensus       302 ~~~~~~~v~~~~~s~d~~~l~t~s~D~------~I~vWdl~  336 (337)
T d1gxra_         302 QSKESSSVLSCDISVDDKYIVTGSGDK------KATVYEVI  336 (337)
T ss_dssp             EEECSSCEEEEEECTTSCEEEEEETTS------CEEEEEEE
T ss_pred             EccCCCCEEEEEEeCCCCEEEEEeCCC------eEEEEEEE
Confidence             22  7899999999999999999988      99999973

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.78  E-value=1.6e-17  Score=114.60  Aligned_cols=106  Identities=12%  Similarity=0.170  Sum_probs=95.2

Q ss_pred             CccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc-----cc
Q psy7062          24 LVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI-----QQ   93 (148)
Q Consensus        24 ~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~-----~~   93 (148)
                      ...++++++.|+.+++||++++  +.+..+.+|...|.+++|+|+++++++++.|+.+++||++..     +.     ..
T Consensus       195 ~~~~~~~~~~d~~v~i~d~~~~--~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~  272 (340)
T d1tbga_         195 DTRLFVSGACDASAKLWDVREG--MCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICG  272 (340)
T ss_dssp             TSSEEEEEETTTEEEEEETTTT--EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSC
T ss_pred             ccceeEEeecCceEEEEECCCC--cEEEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeecccccccccccccccCc
Confidence            3788999999999999999998  888999999999999999999999999999999999999876     21     66


Q ss_pred             ceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccCc
Q psy7062          94 VNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNT  137 (148)
Q Consensus        94 i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~  137 (148)
                      +.+++|+|++++|++++.|+      .|++||+.+.+....+..
T Consensus       273 i~~~~~s~~~~~l~~g~~dg------~i~iwd~~~~~~~~~~~~  310 (340)
T d1tbga_         273 ITSVSFSKSGRLLLAGYDDF------NCNVWDALKADRAGVLAG  310 (340)
T ss_dssp             EEEEEECSSSCEEEEEETTS------CEEEEETTTCCEEEEECC
T ss_pred             eEEEEECCCCCEEEEEECCC------EEEEEECCCCcEEEEEcC
Confidence            89999999999999999988      899999988777665544

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.77  E-value=3.6e-18  Score=116.24  Aligned_cols=93  Identities=18%  Similarity=0.278  Sum_probs=86.6

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc---ccceE
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI---QQVNA   96 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~---~~i~~   96 (148)
                      +.++++++.|+.+++||++++  +.+..+.+|...|.+++++|+++++++++.|+.|++||++++     +.   ..|.+
T Consensus       217 ~~~~~~~~~d~~i~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~V~~  294 (317)
T d1vyhc1         217 GPFLLSGSRDKTIKMWDVSTG--MCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTS  294 (317)
T ss_dssp             CCEEEEEETTSEEEEEETTTT--EEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEE
T ss_pred             CceeEeccCCCEEEEEECCCC--cEEEEEeCCCCCEEEEEECCCCCEEEEEECCCeEEEEECCCCcEEEEEcCCCCCEEE
Confidence            567889899999999999998  888999999999999999999999999999999999999887     33   78999


Q ss_pred             EEEccCCCEEEEEecCCceecCeeEEEee
Q psy7062          97 LRITPDKQLLASAEELSCCYCGAAVFVYN  125 (148)
Q Consensus        97 ~~~sp~~~~l~~~~~d~~~~~~~~i~~~d  125 (148)
                      ++|+|++++|++++.|+      +|++||
T Consensus       295 ~~~s~~~~~l~s~s~Dg------~i~iWd  317 (317)
T d1vyhc1         295 LDFHKTAPYVVTGSVDQ------TVKVWE  317 (317)
T ss_dssp             EEECSSSSCEEEEETTS------EEEEEC
T ss_pred             EEEcCCCCEEEEEeCCC------eEEEeC
Confidence            99999999999999999      999997

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.77  E-value=2.7e-17  Score=114.35  Aligned_cols=115  Identities=10%  Similarity=0.108  Sum_probs=94.8

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeC--CCcEEEEECCcc--
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE--DCRARIWDLSLC--   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~--~~~i~l~d~~~~--   89 (148)
                      ..+++|+|+  +++|++|+.|++|++||+.+........+..|...|.+++|+|+++.+++++.  +..+++|++++.  
T Consensus        61 v~~~~~sp~--g~~latg~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~  138 (311)
T d1nr0a1          61 TTVAKTSPS--GYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTS  138 (311)
T ss_dssp             EEEEEECTT--SSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCB
T ss_pred             EEEEEEeCC--CCeEeccccCceEeeeeeeccccccccccccccCccccccccccccccccccccccccccccccccccc
Confidence            467788887  89999999999999999998733344667889999999999999999988875  456999999876  


Q ss_pred             ---cc---ccceEEEEccCCCE-EEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062          90 ---FI---QQVNALRITPDKQL-LASAEELSCCYCGAAVFVYNSCYPAAVVASN  136 (148)
Q Consensus        90 ---~~---~~i~~~~~sp~~~~-l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~  136 (148)
                         +.   ..+.+++|+|++++ +++++.|+      .|++||.++.+......
T Consensus       139 ~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~------~i~i~d~~~~~~~~~~~  186 (311)
T d1nr0a1         139 NGNLTGQARAMNSVDFKPSRPFRIISGSDDN------TVAIFEGPPFKFKSTFG  186 (311)
T ss_dssp             CBCCCCCSSCEEEEEECSSSSCEEEEEETTS------CEEEEETTTBEEEEEEC
T ss_pred             cccccccccccccccccccceeeeccccccc------ccccccccccccccccc
Confidence               32   77999999999885 77888888      89999998766554443

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.75  E-value=3e-17  Score=112.30  Aligned_cols=109  Identities=15%  Similarity=0.264  Sum_probs=92.4

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceE-EecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVI-NCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~-~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--   89 (148)
                      ...+++|+++  ++++++++.|+.+++||+++.  +... ....|...|.+++|+|+++++++++.++.+++||+.+.  
T Consensus       138 ~~~~~~~s~~--~~~l~~g~~dg~i~~~d~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~  213 (299)
T d1nr0a2         138 NSSCVALSND--KQFVAVGGQDSKVHVYKLSGA--SVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFE  213 (299)
T ss_dssp             CEEEEEECTT--SCEEEEEETTSEEEEEEEETT--EEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTE
T ss_pred             cccccccccc--ccccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccc
Confidence            3466777776  889999999999999999876  4332 33458999999999999999999999999999999765  


Q ss_pred             ------cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          90 ------FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        90 ------~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                            +.   .++.+++|+|++++|++++.|+      .|++||+.+...
T Consensus       214 ~~~~~~~~~h~~~v~~l~~s~~~~~l~sgs~dg------~i~iwd~~~~~~  258 (299)
T d1nr0a2         214 LAHTNSWTFHTAKVACVSWSPDNVRLATGSLDN------SVIVWNMNKPSD  258 (299)
T ss_dssp             ESCCCCCCCCSSCEEEEEECTTSSEEEEEETTS------CEEEEETTCTTS
T ss_pred             ccccccccccccccccccccccccceEEEcCCC------EEEEEECCCCCc
Confidence                  11   6799999999999999999988      899999987653

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.74  E-value=2.2e-17  Score=116.89  Aligned_cols=108  Identities=11%  Similarity=0.094  Sum_probs=92.2

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..+++|+|+  +++|++++.|++|++||+++...+....+.+|...|.+++|+|+++.+++++.++++++|++...    
T Consensus        54 V~~l~fsp~--~~~l~s~s~D~~i~vWd~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~  131 (371)
T d1k8kc_          54 VTGVDWAPD--SNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWW  131 (371)
T ss_dssp             EEEEEEETT--TTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEE
T ss_pred             EEEEEECCC--CCEEEEEECCCeEEEEeecccccccccccccccccccccccccccccceeecccCcceeeeeecccccc
Confidence            467888887  88999999999999999987622344556678899999999999999999999999999988654    


Q ss_pred             -----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          90 -----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        90 -----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                           ..   ..+.+++|+|++++|++++.|+      .|++||....
T Consensus       132 ~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~------~v~v~~~~~~  173 (371)
T d1k8kc_         132 VCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDF------KCRIFSAYIK  173 (371)
T ss_dssp             EEEEECTTCCSCEEEEEECTTSSEEEEEETTS------CEEEEECCCT
T ss_pred             cccccccccccccccccccccccceeccccCc------EEEEEeeccC
Confidence                 11   6789999999999999999988      9999997643

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=3.5e-16  Score=109.14  Aligned_cols=110  Identities=12%  Similarity=0.222  Sum_probs=95.8

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--cc
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--FI   91 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--~~   91 (148)
                      ..+++|+++  +..+++++.|+.+++||++++  +.+..+. |...|.+++|+|+++.+++++.++.+++||++..  +.
T Consensus       186 v~~l~~s~~--~~~~~~~~~d~~v~i~d~~~~--~~~~~~~-~~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~  260 (337)
T d1gxra_         186 ASCIDISND--GTKLWTGGLDNTVRSWDLREG--RQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQ  260 (337)
T ss_dssp             EEEEEECTT--SSEEEEEETTSEEEEEETTTT--EEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEE
T ss_pred             ccccccccc--ccccccccccccccccccccc--eeecccc-cccceEEEEEcccccccceecccccccccccccccccc
Confidence            356677776  789999999999999999988  7777664 8899999999999999999999999999999887  11


Q ss_pred             -----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceec
Q psy7062          92 -----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVA  134 (148)
Q Consensus        92 -----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~  134 (148)
                           ..+.+++|+|++++|++++.|+      .|++||..+.+....
T Consensus       261 ~~~~~~~i~~v~~s~~g~~l~s~s~Dg------~i~iwd~~~~~~~~~  302 (337)
T d1gxra_         261 LHLHESCVLSLKFAYCGKWFVSTGKDN------LLNAWRTPYGASIFQ  302 (337)
T ss_dssp             ECCCSSCEEEEEECTTSSEEEEEETTS------EEEEEETTTCCEEEE
T ss_pred             ccccccccceEEECCCCCEEEEEeCCC------eEEEEECCCCCEEEE
Confidence                 7899999999999999999988      999999987765543

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.71  E-value=1.8e-16  Score=107.89  Aligned_cols=102  Identities=16%  Similarity=0.127  Sum_probs=86.2

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceE-EecCCCCCEEEEEEccCC----------CEEEEEeCCCcEE
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVI-NCEGVSKNVVEVGFQEDG----------KWMFTGGEDCRAR   82 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~-~~~~~~~~i~~~~~sp~~----------~~l~~~~~~~~i~   82 (148)
                      ..+++|+++  +.+|++++.|+.+++||+.++  +... .+..|...|.+++|+|++          .++++++.|+.++
T Consensus       165 v~~~~~s~~--~~~l~~g~~dg~i~i~d~~~~--~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~  240 (287)
T d1pgua2         165 PSYISISPS--ETYIAAGDVMGKILLYDLQSR--EVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIF  240 (287)
T ss_dssp             EEEEEECTT--SSEEEEEETTSCEEEEETTTT--EEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEE
T ss_pred             eeEEEeccC--ccccccccccccccceeeccc--ccccccccccccccceeeecccccccccccCCCCeeEeecCCCeEE
Confidence            457788887  899999999999999999987  4443 456799999999998754          5899999999999


Q ss_pred             EEECCcc------cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeec
Q psy7062          83 IWDLSLC------FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNS  126 (148)
Q Consensus        83 l~d~~~~------~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~  126 (148)
                      +||++..      +.   ..+.+++|+|++ .|++++.|+      .|++||+
T Consensus       241 iw~~~~~~~~~~~~~~h~~~V~~v~~~~~~-~l~s~g~D~------~v~iW~i  286 (287)
T d1pgua2         241 IYSVKRPMKIIKALNAHKDGVNNLLWETPS-TLVSSGADA------CIKRWNV  286 (287)
T ss_dssp             EEESSCTTCCEEETTSSTTCEEEEEEEETT-EEEEEETTS------CEEEEEE
T ss_pred             EEECCCCCeEEEEeCCCCCCeEEEEECCCC-EEEEEECCC------eEEEEEE
Confidence            9999775      22   789999999986 488899988      9999996

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.71  E-value=1.5e-16  Score=108.82  Aligned_cols=105  Identities=17%  Similarity=0.181  Sum_probs=84.7

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCC-CceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNP-NPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~-~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---   89 (148)
                      ..+++|+++  +++|++++.++.+++||+.++.. .....+..|...|.+++|+|+++++++++.|+.+++||+++.   
T Consensus       182 i~~~~~~~~--~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~~~~~~  259 (299)
T d1nr0a2         182 ITSVAFSNN--GAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDH  259 (299)
T ss_dssp             EEEEEECTT--SSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSC
T ss_pred             ccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccceEEEcCCCEEEEEECCCCCcc
Confidence            456777776  88999999999999999987611 123455678999999999999999999999999999999876   


Q ss_pred             --c-c-----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          90 --F-I-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        90 --~-~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                        + .     ..+.++. ++++++|++++.|+      .|++||++
T Consensus       260 ~~~~~~~~~~~~v~~~~-~~~~~~l~s~s~D~------~i~iWdl~  298 (299)
T d1nr0a2         260 PIIIKGAHAMSSVNSVI-WLNETTIVSAGQDS------NIKFWNVP  298 (299)
T ss_dssp             CEEETTSSTTSCEEEEE-EEETTEEEEEETTS------CEEEEECC
T ss_pred             eEEEecCCCCCcEEEEE-ECCCCEEEEEeCCC------EEEEEecc
Confidence              1 1     3455554 46677899999988      99999985

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.71  E-value=5.3e-16  Score=105.28  Aligned_cols=111  Identities=15%  Similarity=0.322  Sum_probs=99.2

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ..+++|+|+  +++|++|+.|++|++||++++  +.+..+.+|...|.+++++|++..++++..++.+..|+....    
T Consensus        20 I~~l~~sp~--~~~l~s~s~Dg~i~iWd~~~~--~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (317)
T d1vyhc1          20 VTRVIFHPV--FSVMVSASEDATIKVWDYETG--DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIR   95 (317)
T ss_dssp             EEEEEECSS--SSEEEEEESSSCEEEEETTTC--CCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEE
T ss_pred             eEEEEEcCC--CCEEEEEeCCCeEEEEECCCC--CEEEEEeCCCCcEEEEeeeccccccccccccccccccccccccccc
Confidence            467888887  899999999999999999998  889999999999999999999999999999999999999876    


Q ss_pred             -cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceec
Q psy7062          90 -FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVA  134 (148)
Q Consensus        90 -~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~  134 (148)
                       +.   ..+.++.|+|++..+++++.|+      .+++||+++......
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~------~~~~~~~~~~~~~~~  138 (317)
T d1vyhc1          96 TMHGHDHNVSSVSIMPNGDHIVSASRDK------TIKMWEVQTGYCVKT  138 (317)
T ss_dssp             CCCCCSSCEEEEEECSSSSEEEEEETTS------EEEEEETTTCCEEEE
T ss_pred             ccccccccceeeeccCCCceEEeeccCc------ceeEeecccceeeeE
Confidence             22   7788999999999999999988      999999987665443

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.70  E-value=3.7e-16  Score=107.78  Aligned_cols=104  Identities=14%  Similarity=0.225  Sum_probs=86.9

Q ss_pred             EEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc
Q psy7062          17 TVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI   91 (148)
Q Consensus        17 ~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~   91 (148)
                      .+++++  +++|++|+.|++|++||+.++  +.+.++.+|...|.+++|+|+ ..+++++.|+.+++|+....     ..
T Consensus        17 tc~~~~--~~~l~tgs~Dg~i~vWd~~~~--~~~~~l~~H~~~V~~l~~s~~-~~l~s~s~D~~i~iw~~~~~~~~~~~~   91 (355)
T d1nexb2          17 TCLQFE--DNYVITGADDKMIRVYDSINK--KFLLQLSGHDGGVWALKYAHG-GILVSGSTDRTVRVWDIKKGCCTHVFE   91 (355)
T ss_dssp             EEEEEE--TTEEEEEETTTEEEEEETTTT--EEEEEEECCSSCEEEEEEETT-TEEEEEETTCCEEEEETTTTEEEEEEC
T ss_pred             EEEEEC--CCEEEEEeCCCeEEEEECCCC--cEEEEEECCCCCEEEEEEcCC-CEEEEEecccccccccccccccccccc
Confidence            345555  789999999999999999998  889999999999999999985 57999999999999999877     11


Q ss_pred             -----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          92 -----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        92 -----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                           .......++++++.+++++.|+      .|++||++....
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~d~------~i~iw~~~~~~~  130 (355)
T d1nexb2          92 GHNSTVRCLDIVEYKNIKYIVTGSRDN------TLHVWKLPKESS  130 (355)
T ss_dssp             CCSSCEEEEEEEEETTEEEEEEEETTS------EEEEEECCC---
T ss_pred             cccccccccccccccccceeeeecCCC------cEEEEEccCCce
Confidence                 3345566788999999999988      999999886543

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.69  E-value=6.9e-16  Score=108.61  Aligned_cols=107  Identities=22%  Similarity=0.297  Sum_probs=91.1

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEec------------------CCCCCEEEEEEccCCCEEEEE
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCE------------------GVSKNVVEVGFQEDGKWMFTG   75 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~------------------~~~~~i~~~~~sp~~~~l~~~   75 (148)
                      ..+++|+++  |++|++|+ |++|++||+.++  +.+..+.                  .|...|.+++|+|++++++++
T Consensus        65 V~~l~fs~d--g~~lasg~-d~~i~iW~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~s~  139 (388)
T d1erja_          65 VCCVKFSND--GEYLATGC-NKTTQVYRVSDG--SLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATG  139 (388)
T ss_dssp             CCEEEECTT--SSEEEEEC-BSCEEEEETTTC--CEEEEECC-----------------CCCCBEEEEEECTTSSEEEEE
T ss_pred             EEEEEECCC--CCEEEEEe-CCeEEEEEeccc--ceEeeecccccccccccccccccccCCCCCEEEEEECCCCCcceec
Confidence            578999987  89999965 899999999887  5555443                  355679999999999999999


Q ss_pred             eCCCcEEEEECCcc-----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          76 GEDCRARIWDLSLC-----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        76 ~~~~~i~l~d~~~~-----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                      +.|+.+++||....     +.   ..+.++.|++++..+++++.++      .+++||......
T Consensus       140 ~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~------~i~~~d~~~~~~  197 (388)
T d1erja_         140 AEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDR------TVRIWDLRTGQC  197 (388)
T ss_dssp             ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTS------EEEEEETTTTEE
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccce------eeeeeecccccc
Confidence            99999999999887     21   7799999999999999999988      899999886544

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.69  E-value=1.4e-15  Score=106.98  Aligned_cols=114  Identities=18%  Similarity=0.229  Sum_probs=91.8

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEe-------cCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECC
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINC-------EGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLS   87 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~-------~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~   87 (148)
                      ...++.+. .+.+|++++.|+.+++||.+++  .....+       .+|...|.+++|+|+++++++++.|+.+++||++
T Consensus       208 ~~~~~~~~-~~~~l~~~~~d~~i~i~~~~~~--~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~  284 (388)
T d1erja_         208 TTVAVSPG-DGKYIAAGSLDRAVRVWDSETG--FLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQ  284 (388)
T ss_dssp             EEEEECST-TCCEEEEEETTSCEEEEETTTC--CEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred             ccccccCC-CCCeEEEEcCCCeEEEeecccC--ccceeeccccccccCCCCCEEEEEECCCCCEEEEEECCCcEEEEecc
Confidence            34445443 4789999999999999999987  544433       3578899999999999999999999999999997


Q ss_pred             cc-----c------------c---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccCc
Q psy7062          88 LC-----F------------I---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASNT  137 (148)
Q Consensus        88 ~~-----~------------~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~  137 (148)
                      ..     .            .   ..+.+++|+|++++|++++.|+      .|++||+++.+.+..+..
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg------~i~vwd~~~~~~~~~l~~  348 (388)
T d1erja_         285 NANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDR------GVLFWDKKSGNPLLMLQG  348 (388)
T ss_dssp             --------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTS------EEEEEETTTCCEEEEEEC
T ss_pred             CCccccccccccccceeeecccccceEEEEEECCCCCEEEEEeCCC------EEEEEECCCCcEEEEEeC
Confidence            65     0            0   5689999999999999999988      999999998877665543

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.65  E-value=1.3e-15  Score=106.09  Aligned_cols=104  Identities=18%  Similarity=0.203  Sum_probs=82.4

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEc---cCCCEEEEEeCCCcEEEEECCcc-
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQ---EDGKWMFTGGEDCRARIWDLSLC-   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~s---p~~~~l~~~~~~~~i~l~d~~~~-   89 (148)
                      ..+++|+|+. +.++++++.|+.|++||++++  +.+..+.+|...+.++.|+   |+++++++++.|+.+++||++++ 
T Consensus       208 v~~v~~~pd~-~~~l~s~~~d~~i~iwd~~~~--~~~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~~  284 (325)
T d1pgua1         208 VRDVEFSPDS-GEFVITVGSDRKISCFDGKSG--EFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSK  284 (325)
T ss_dssp             EEEEEECSTT-CCEEEEEETTCCEEEEETTTC--CEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTE
T ss_pred             cEEeeecccc-ceeccccccccceeeeeeccc--cccccccccccccccceeeeeccCCCEEEEEeCCCeEEEEECCCCC
Confidence            3577888864 688999999999999999998  8888998888776655555   78999999999999999999877 


Q ss_pred             ----cc-----ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeec
Q psy7062          90 ----FI-----QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNS  126 (148)
Q Consensus        90 ----~~-----~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~  126 (148)
                          +.     .....+++.+ ...+|++++.|+      .|++||+
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~dg------~i~vwdl  325 (325)
T d1pgua1         285 CVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDG------TLNFYEL  325 (325)
T ss_dssp             EEEEEECCTTCGGGCEEEEEEEETTEEEEEETTS------CEEEEET
T ss_pred             EEEEEEecCCcccCeEEEEEECCCCEEEEEECCC------EEEEEEC
Confidence                22     2334444443 234788999988      9999996

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=2.4e-14  Score=98.01  Aligned_cols=109  Identities=13%  Similarity=0.158  Sum_probs=86.5

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----   89 (148)
                      ....+.++  +.++++++.|+.|++||++..  +.+..+.+|...+.++++  +++++++++.|+.+++||+...     
T Consensus       179 ~~~~~~~~--~~~l~s~~~dg~i~~~d~~~~--~~~~~~~~~~~~v~~~~~--~~~~l~s~s~d~~i~iwd~~~~~~~~~  252 (342)
T d2ovrb2         179 RVYSLQFD--GIHVVSGSLDTSIRVWDVETG--NCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQT  252 (342)
T ss_dssp             CEEEEEEC--SSEEEEEETTSCEEEEETTTC--CEEEEECCCCSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEE
T ss_pred             ccccccCC--CCEEEEEeCCCeEEEeecccc--eeeeEecccccceeEEec--CCCEEEEEcCCCEEEEEeccccccccc
Confidence            34444555  788999999999999999998  888899999999987765  4579999999999999999876     


Q ss_pred             cc----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062          90 FI----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus        90 ~~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                      +.    ......+++++++++++++.||      +|++||+++.+.+..+
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~s~s~Dg------~i~iwd~~tg~~i~~~  296 (342)
T d2ovrb2         253 LQGPNKHQSAVTCLQFNKNFVITSSDDG------TVKLWDLKTGEFIRNL  296 (342)
T ss_dssp             ECSTTSCSSCEEEEEECSSEEEEEETTS------EEEEEETTTCCEEEEE
T ss_pred             ccccceeeeceeecccCCCeeEEEcCCC------EEEEEECCCCCEEEEE
Confidence            22    2233344455778999999988      9999999987765544

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=2.6e-14  Score=95.84  Aligned_cols=103  Identities=15%  Similarity=0.270  Sum_probs=84.7

Q ss_pred             EEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----c
Q psy7062          16 STVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----F   90 (148)
Q Consensus        16 ~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~   90 (148)
                      ..+++++  +++|++|+.|++|++||++++  +.+..+.+|...|.+++|  +++++++++.|+.+++|+++..     .
T Consensus        18 V~c~~~d--~~~l~sgs~Dg~i~vWd~~~~--~~~~~l~~H~~~V~~v~~--~~~~l~s~s~D~~i~~~~~~~~~~~~~~   91 (293)
T d1p22a2          18 VYCLQYD--DQKIVSGLRDNTIKIWDKNTL--ECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTL   91 (293)
T ss_dssp             EEEEECC--SSEEEEEESSSCEEEEESSSC--CEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEE
T ss_pred             EEEEEEc--CCEEEEEeCCCeEEEEECCCC--cEEEEEecCCCCEeeeec--ccceeecccccccccccccccccccccc
Confidence            3345665  889999999999999999998  899999999999988866  7889999999999999999887     1


Q ss_pred             c-ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          91 I-QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        91 ~-~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                      . .......+.+....++++..++      .+.+||.....
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~  126 (293)
T d1p22a2          92 IHHCEAVLHLRFNNGMMVTCSKDR------SIAVWDMASPT  126 (293)
T ss_dssp             CCCCSCEEEEECCTTEEEEEETTS------CEEEEECSSSS
T ss_pred             cccccccccccccccceeeccccc------ceeEeeccccc
Confidence            1 3344455666777888888877      89999987654

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.62  E-value=8e-15  Score=100.18  Aligned_cols=109  Identities=9%  Similarity=-0.018  Sum_probs=86.0

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCC-ceEEecCCCCCEEEEEEccCC-CEEEEEeCCCcEEEEECCcc-
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPN-PVINCEGVSKNVVEVGFQEDG-KWMFTGGEDCRARIWDLSLC-   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~-~~~~~~~~~~~i~~~~~sp~~-~~l~~~~~~~~i~l~d~~~~-   89 (148)
                      +..+++|+|+  +++|++|+.|++|++||+++.... .+....+|...|.+++|+|++ ..+++|+.|+.+++|++... 
T Consensus        13 ~I~~l~fsp~--~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w~~~~~~   90 (342)
T d1yfqa_          13 YISDIKIIPS--KSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSP   90 (342)
T ss_dssp             CEEEEEEEGG--GTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSS
T ss_pred             CEEEEEEeCC--CCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccceeeeeccccc
Confidence            3578999997  899999999999999999875211 223334699999999999864 58899999999999999877 


Q ss_pred             ----cc----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          90 ----FI----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        90 ----~~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                          ..    .......+.++...+++++.++      .+++||++..
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~wd~~~~  132 (342)
T d1yfqa_          91 SFQALTNNEANLGICRICKYGDDKLIAASWDG------LIEVIDPRNY  132 (342)
T ss_dssp             SEEECBSCCCCSCEEEEEEETTTEEEEEETTS------EEEEECHHHH
T ss_pred             cccccccccccccccccccccccccccccccc------ccceeecccc
Confidence                11    3334555667888999999988      9999997643

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.61  E-value=2.9e-14  Score=96.76  Aligned_cols=110  Identities=13%  Similarity=0.230  Sum_probs=85.1

Q ss_pred             EEEEEeCCCCccEEEEEecCC-eEEEEeCCCCCCCceEEec-CCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQ-HIRMYDFGSNNPNPVINCE-GVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~-~v~~~d~~~~~~~~~~~~~-~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---   89 (148)
                      ...+++++  ++.+++++.++ .+++|++...  +....+. .|...+++++|+|++.++++++.|+.+++||+.+.   
T Consensus       122 ~~~~~~~~--~~~~~v~~~~~~~v~~~~~~~~--~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~  197 (287)
T d1pgua2         122 PGSAVSLS--QNYVAVGLEEGNTIQVFKLSDL--EVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVK  197 (287)
T ss_dssp             CEEEEEEC--SSEEEEEETTTSCEEEEETTEE--EEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred             eeeeeecc--Ccceeeeccccceeeeeecccc--ceeeeeeeccCCceeEEEeccCccccccccccccccceeecccccc
Confidence            45566666  55666666654 7999999765  4444433 46788999999999999999999999999999876   


Q ss_pred             ---cc---ccceEEEEccC----------CCEEEEEecCCceecCeeEEEeecCCCcceec
Q psy7062          90 ---FI---QQVNALRITPD----------KQLLASAEELSCCYCGAAVFVYNSCYPAAVVA  134 (148)
Q Consensus        90 ---~~---~~i~~~~~sp~----------~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~  134 (148)
                         +.   .++.+++|+|.          +.++++++.|+      +|++||++.+.....
T Consensus       198 ~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~------~i~iw~~~~~~~~~~  252 (287)
T d1pgua2         198 TSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDT------NIFIYSVKRPMKIIK  252 (287)
T ss_dssp             ECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTS------CEEEEESSCTTCCEE
T ss_pred             cccccccccccceeeecccccccccccCCCCeeEeecCCC------eEEEEECCCCCeEEE
Confidence               11   77999999874          46899999988      999999987654433

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.61  E-value=1e-14  Score=100.41  Aligned_cols=107  Identities=20%  Similarity=0.278  Sum_probs=86.5

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---cc
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---FI   91 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---~~   91 (148)
                      ....+++.  +.++++++.|+++++||.+++  ..+..+.+|...|.+++++  ++++++++.|+.|++||+++.   +.
T Consensus       205 ~~~~~~~~--~~~~~~~~~d~~i~i~d~~~~--~~~~~~~~h~~~v~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~  278 (355)
T d1nexb2         205 YSTIYDHE--RKRCISASMDTTIRIWDLENG--ELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFS  278 (355)
T ss_dssp             EEEEEETT--TTEEEEEETTSCEEEEETTTC--CEEEEECCCSSCCCEEEEC--SSEEEEECTTSEEEEEETTTCCEEEE
T ss_pred             cccccccc--ceeeecccccceEEeeecccc--ccccccccccccccccccc--cceeeeeecccccccccccccceecc
Confidence            45666666  788999999999999999998  8889999999999998875  579999999999999999887   22


Q ss_pred             ---ccceEE-EEccCCCEEEEEecCCceecCeeEEEeecCCCcceec
Q psy7062          92 ---QQVNAL-RITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVA  134 (148)
Q Consensus        92 ---~~i~~~-~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~  134 (148)
                         ..+.++ .++++++++++++ |+      .|++||+++.+.+..
T Consensus       279 ~~~~~~~~~~~~~~~~~~l~~g~-d~------~i~vwd~~tg~~~~~  318 (355)
T d1nexb2         279 YHHTNLSAITTFYVSDNILVSGS-EN------QFNIYNLRSGKLVHA  318 (355)
T ss_dssp             EECTTCCCCCEEEECSSEEEEEE-TT------EEEEEETTTCCBCCS
T ss_pred             cccCCceEEEEEcCCCCEEEEEe-CC------EEEEEECCCCCEEEE
Confidence               444444 4567777766654 66      899999998776543

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.60  E-value=2.3e-14  Score=101.83  Aligned_cols=92  Identities=18%  Similarity=0.269  Sum_probs=73.6

Q ss_pred             cEEEEEeCCCCccEEEEEecCC---eEEEEeCCCCCCCceEEe-------------cCCCCCEEEEEEccCCCEEEEEeC
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQ---HIRMYDFGSNNPNPVINC-------------EGVSKNVVEVGFQEDGKWMFTGGE   77 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~---~v~~~d~~~~~~~~~~~~-------------~~~~~~i~~~~~sp~~~~l~~~~~   77 (148)
                      ..+++|+|+  +++|++|+.|+   .+++||++++  +.+..+             .+|...|++++|+|++++|++++.
T Consensus       234 V~~l~~spd--g~~l~sgs~D~t~~~i~lwd~~~g--~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~  309 (393)
T d1sq9a_         234 IRSVKFSPQ--GSLLAIAHDSNSFGCITLYETEFG--ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGW  309 (393)
T ss_dssp             EEEEEECSS--TTEEEEEEEETTEEEEEEEETTTC--CEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEET
T ss_pred             EEEcccccc--cceeeeecCCCCcceeeecccccc--eeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECC
Confidence            467888887  89999999887   4999999987  655554             379999999999999999999999


Q ss_pred             CCcEEEEECCcc-----cc---cc----ceEEEEccCCCEEEEE
Q psy7062          78 DCRARIWDLSLC-----FI---QQ----VNALRITPDKQLLASA  109 (148)
Q Consensus        78 ~~~i~l~d~~~~-----~~---~~----i~~~~~sp~~~~l~~~  109 (148)
                      |++|++||+.++     +.   ..    ...++|+|++..++++
T Consensus       310 D~~v~vWd~~~g~~~~~l~gH~~~v~~~~~~~~~~~~~~~~~~~  353 (393)
T d1sq9a_         310 DGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEP  353 (393)
T ss_dssp             TSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSC
T ss_pred             CCEEEEEECCCCCEEEEECCcCCcccCCccEEEECCCCCEEEEc
Confidence            999999999887     22   22    2346677777665543

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.60  E-value=5.6e-14  Score=97.63  Aligned_cols=112  Identities=11%  Similarity=0.128  Sum_probs=92.7

Q ss_pred             EEEEEeCCCCccEEEEEec--CCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCE-EEEEeCCCcEEEEECCcc--
Q psy7062          15 ISTVFDSKHLVEMVAALGG--YQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKW-MFTGGEDCRARIWDLSLC--   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~--d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~-l~~~~~~~~i~l~d~~~~--   89 (148)
                      .+++|+++  +.++++++.  ++.+++|+.+++  +.+..+.+|...|.+++|+|++.. +++++.|+.+++||.+..  
T Consensus       119 ~~v~~s~~--~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~  194 (325)
T d1pgua1         119 SDISWDFE--GRRLCVVGEGRDNFGVFISWDSG--NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKF  194 (325)
T ss_dssp             EEEEECTT--SSEEEEEECCSSCSEEEEETTTC--CEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEE
T ss_pred             EEEEECCC--CCccceeeccccceEEEEeeccc--ccceeeeecccccccccccccccceEEEeeccccccccccccccc
Confidence            46777776  777776554  567999999988  888999999999999999998874 678999999999999876  


Q ss_pred             ------cc---ccceEEEEccC-CCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062          90 ------FI---QQVNALRITPD-KQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN  136 (148)
Q Consensus        90 ------~~---~~i~~~~~sp~-~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~  136 (148)
                            +.   ..+.+++|+|+ +.++++++.|+      .|++||.++.+....+.
T Consensus       195 ~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~------~i~iwd~~~~~~~~~l~  245 (325)
T d1pgua1         195 SASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDR------KISCFDGKSGEFLKYIE  245 (325)
T ss_dssp             EEEECSSSCTTCCEEEEEECSTTCCEEEEEETTC------CEEEEETTTCCEEEECC
T ss_pred             ceecccccCCCCccEEeeeccccceecccccccc------ceeeeeecccccccccc
Confidence                  11   66899999996 67899999988      89999998877665554

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.59  E-value=2.4e-14  Score=99.31  Aligned_cols=106  Identities=14%  Similarity=0.116  Sum_probs=87.2

Q ss_pred             cEEEEEeC-CCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCC--cEEEEECCcc-
Q psy7062          14 QISTVFDS-KHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDC--RARIWDLSLC-   89 (148)
Q Consensus        14 ~~~~~~~~-~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~--~i~l~d~~~~-   89 (148)
                      .....|+| +  |+++++ ...+.+.+||++.+  + +..+ +|...|.+++|+|||+.|++++.+.  .+++||.+++ 
T Consensus         5 ~~~~~fSP~d--G~~~a~-~~~g~v~v~d~~~~--~-~~~~-~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~   77 (360)
T d1k32a3           5 KFAEDFSPLD--GDLIAF-VSRGQAFIQDVSGT--Y-VLKV-PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGK   77 (360)
T ss_dssp             GGEEEEEECG--GGCEEE-EETTEEEEECTTSS--B-EEEC-SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCC
T ss_pred             hhcccccCCC--CCEEEE-EECCeEEEEECCCC--c-EEEc-cCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCc
Confidence            44567888 6  899999 45689999999876  4 4444 5999999999999999988776553  7999999887 


Q ss_pred             ---cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062          90 ---FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV  132 (148)
Q Consensus        90 ---~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~  132 (148)
                         +.   ..+.+++|+|++++|++++.++      .+++|+.......
T Consensus        78 ~~~~~~~~~~v~~~~~spdg~~l~~~~~~~------~~~~~~~~~~~~~  120 (360)
T d1k32a3          78 AEKFEENLGNVFAMGVDRNGKFAVVANDRF------EIMTVDLETGKPT  120 (360)
T ss_dssp             EEECCCCCCSEEEEEECTTSSEEEEEETTS------EEEEEETTTCCEE
T ss_pred             EEEeeCCCceEEeeeecccccccceecccc------cccccccccccee
Confidence               22   7789999999999999999977      8999998876543

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=2.1e-14  Score=98.29  Aligned_cols=105  Identities=13%  Similarity=0.243  Sum_probs=81.5

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecC---CCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEG---VSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~---~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--   89 (148)
                      ...+++++  +++|++++.|+.+++||+...  +....+..   |...+.++.  ++++++++++.|+.|++||++++  
T Consensus       219 ~v~~~~~~--~~~l~s~s~d~~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~s~s~Dg~i~iwd~~tg~~  292 (342)
T d2ovrb2         219 LTSGMELK--DNILVSGNADSTVKIWDIKTG--QCLQTLQGPNKHQSAVTCLQ--FNKNFVITSSDDGTVKLWDLKTGEF  292 (342)
T ss_dssp             CEEEEEEE--TTEEEEEETTSCEEEEETTTC--CEEEEECSTTSCSSCEEEEE--ECSSEEEEEETTSEEEEEETTTCCE
T ss_pred             ceeEEecC--CCEEEEEcCCCEEEEEecccc--cccccccccceeeeceeecc--cCCCeeEEEcCCCEEEEEECCCCCE
Confidence            34444554  678999999999999999987  66666654   445565554  46679999999999999999887  


Q ss_pred             ---cc--------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          90 ---FI--------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        90 ---~~--------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                         +.        ..|++++|+|++.++++|+.||..  ...|++||..
T Consensus       293 i~~~~~~~~~~~~~~v~~v~~s~~~~~la~g~~dGt~--~~~l~~~Df~  339 (342)
T d2ovrb2         293 IRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTE--ETKLLVLDFD  339 (342)
T ss_dssp             EEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSS--CCEEEEEECC
T ss_pred             EEEEecccCCCCCCCEEEEEECCCCCEEEEEeCCCCC--eeEEEEEeCC
Confidence               21        469999999999999999988721  2369999975

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.56  E-value=1.6e-14  Score=103.89  Aligned_cols=105  Identities=12%  Similarity=0.010  Sum_probs=83.1

Q ss_pred             EeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-------cc
Q psy7062          19 FDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-------FI   91 (148)
Q Consensus        19 ~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-------~~   91 (148)
                      ++.+..+.++++.++|++|++||+.++  +.+..+..+ ..+..++|||||+++++++.|+++++||+.+.       +.
T Consensus        26 ~~~d~~~~~~V~~~~dg~v~vwD~~t~--~~~~~l~~g-~~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~  102 (426)
T d1hzua2          26 NDLDLPNLFSVTLRDAGQIALVDGDSK--KIVKVIDTG-YAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK  102 (426)
T ss_dssp             SCCCGGGEEEEEETTTTEEEEEETTTC--SEEEEEECC-SSEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE
T ss_pred             ccCCCCeEEEEEEcCCCEEEEEECCCC--cEEEEEeCC-CCeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEe
Confidence            444444567788888999999999998  889999865 46899999999999999999999999999876       11


Q ss_pred             ------ccceEEEEccCCCEEEEEe-cCCceecCeeEEEeecCCCcce
Q psy7062          92 ------QQVNALRITPDKQLLASAE-ELSCCYCGAAVFVYNSCYPAAV  132 (148)
Q Consensus        92 ------~~i~~~~~sp~~~~l~~~~-~d~~~~~~~~i~~~d~~~~~~~  132 (148)
                            ..+.+..|+|||+++++++ .++      .+.+||.......
T Consensus       103 ~~~~~~~~~~s~~~spDG~~l~v~~~~~~------~v~i~d~~~~~~~  144 (426)
T d1hzua2         103 IGIEARSVESSKFKGYEDRYTIAGAYWPP------QFAIMDGETLEPK  144 (426)
T ss_dssp             CCSEEEEEEECCSTTCTTTEEEEEEEESS------EEEEEETTTCCEE
T ss_pred             CCCCCcceEEeeeecCCCCEEEEeecCCC------eEEEEcCCcccee
Confidence                  3344556778999876665 444      8999998876544

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.52  E-value=3.6e-13  Score=93.23  Aligned_cols=113  Identities=16%  Similarity=0.195  Sum_probs=90.0

Q ss_pred             cEEEEEeCCCCccEEEEEecCC--eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQ--HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~--~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--   89 (148)
                      ..+++|+|+  |+.|++++.+.  .+++||.+++   ....+..|...+..++|+|+++++++++.++.+++|+....  
T Consensus        45 v~~~~~spD--g~~l~~~~~~~g~~v~v~d~~~~---~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~  119 (360)
T d1k32a3          45 IRYVRRGGD--TKVAFIHGTREGDFLGIYDYRTG---KAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKP  119 (360)
T ss_dssp             EEEEEECSS--SEEEEEEEETTEEEEEEEETTTC---CEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred             EEEEEECCC--CCEEEEEEcCCCCEEEEEECCCC---cEEEeeCCCceEEeeeecccccccceeccccccccccccccce
Confidence            578889998  78887766554  7999999987   45566779999999999999999999999999999999887  


Q ss_pred             ---cc---ccceEEEEccCCCEEEEEecCCce----ecCeeEEEeecCCCcc
Q psy7062          90 ---FI---QQVNALRITPDKQLLASAEELSCC----YCGAAVFVYNSCYPAA  131 (148)
Q Consensus        90 ---~~---~~i~~~~~sp~~~~l~~~~~d~~~----~~~~~i~~~d~~~~~~  131 (148)
                         +.   ..+.+++|+|+|++|+.+..+...    .....+++||....+.
T Consensus       120 ~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~  171 (360)
T d1k32a3         120 TVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKI  171 (360)
T ss_dssp             EEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEE
T ss_pred             eeeeecccccccchhhccceeeeeeeccccccceeeccccceeeeccccCce
Confidence               22   678889999999999876543311    1234688999886544

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=1.9e-13  Score=91.56  Aligned_cols=89  Identities=20%  Similarity=0.355  Sum_probs=74.3

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--------------c
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--------------F   90 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--------------~   90 (148)
                      +..+++++.|+++++||+++.  ..+....+|...+..  +++++.++++++.|+.+++||+...              +
T Consensus       188 ~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~v~~--~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  263 (293)
T d1p22a2         188 DRLVVSGSSDNTIRLWDIECG--ACLRVLEGHEELVRC--IRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTL  263 (293)
T ss_dssp             TTEEEEEETTSCEEEEETTTC--CEEEEECCCSSCEEE--EECCSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEE
T ss_pred             CCeEEEecCCCEEEEEecccc--eeeeeecccceeeee--ccccceEEEEEcCCCEEEEEECCCCccccccCCceeeEEe
Confidence            567889899999999999988  788888888887754  5678889999999999999998543              1


Q ss_pred             c---ccceEEEEccCCCEEEEEecCCceecCeeEEEee
Q psy7062          91 I---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYN  125 (148)
Q Consensus        91 ~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d  125 (148)
                      .   ..|.+++|  ++++|++++.|+      +|++||
T Consensus       264 ~~H~~~V~~v~~--d~~~l~s~s~Dg------~i~iWD  293 (293)
T d1p22a2         264 VEHSGRVFRLQF--DEFQIVSSSHDD------TILIWD  293 (293)
T ss_dssp             CCCSSCCCCEEE--CSSCEEECCSSS------EEEEEC
T ss_pred             cCCCCCEEEEEE--cCCEEEEEecCC------EEEEeC
Confidence            1   56788888  567899999988      999998

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.50  E-value=1.4e-13  Score=99.45  Aligned_cols=100  Identities=12%  Similarity=0.023  Sum_probs=79.9

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-------cc------
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-------FI------   91 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-------~~------   91 (148)
                      .-++++.+.+++|.+||.+++  +.+..+..+ ..+..++|||||+++++++.|+.+++||+.+.       +.      
T Consensus        32 ~~~~v~~~d~g~v~v~D~~t~--~v~~~~~~g-~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~  108 (432)
T d1qksa2          32 NLFSVTLRDAGQIALIDGSTY--EIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEAR  108 (432)
T ss_dssp             GEEEEEETTTTEEEEEETTTC--CEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEE
T ss_pred             cEEEEEEcCCCEEEEEECCCC--cEEEEEeCC-CCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCC
Confidence            445688899999999999999  889998865 46899999999999999999999999999775       11      


Q ss_pred             ccceEEEEccCCCEE-EEEecCCceecCeeEEEeecCCCccee
Q psy7062          92 QQVNALRITPDKQLL-ASAEELSCCYCGAAVFVYNSCYPAAVV  133 (148)
Q Consensus        92 ~~i~~~~~sp~~~~l-~~~~~d~~~~~~~~i~~~d~~~~~~~~  133 (148)
                      ..+.+..|+|||++| +++..++      .|++||..+.+...
T Consensus       109 ~~~~s~~~SpDG~~l~vs~~~~~------~v~i~d~~t~~~~~  145 (432)
T d1qksa2         109 SIETSKMEGWEDKYAIAGAYWPP------QYVIMDGETLEPKK  145 (432)
T ss_dssp             EEEECCSTTCTTTEEEEEEEETT------EEEEEETTTCCEEE
T ss_pred             CeEEecccCCCCCEEEEEcCCCC------eEEEEeCcccccee
Confidence            223344567799976 5566666      89999988776543

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.43  E-value=4.8e-13  Score=91.11  Aligned_cols=79  Identities=3%  Similarity=0.004  Sum_probs=66.5

Q ss_pred             ceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----c----c--ccceEEEEccC-CCEEEEEecCCcee
Q psy7062          49 PVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----F----I--QQVNALRITPD-KQLLASAEELSCCY  116 (148)
Q Consensus        49 ~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~----~--~~i~~~~~sp~-~~~l~~~~~d~~~~  116 (148)
                      .+...++|...|++++|+|++++|++++.|++|++||+...     +    .  .+|.+++|+|+ +..|++++.|+   
T Consensus         3 ~v~~~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~---   79 (342)
T d1yfqa_           3 IVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQG---   79 (342)
T ss_dssp             EEECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTS---
T ss_pred             eEEcCCCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEccccc---
Confidence            45566789999999999999999999999999999998654     1    1  78999999986 55889999988   


Q ss_pred             cCeeEEEeecCCCccee
Q psy7062         117 CGAAVFVYNSCYPAAVV  133 (148)
Q Consensus       117 ~~~~i~~~d~~~~~~~~  133 (148)
                         .|++|+........
T Consensus        80 ---~v~~w~~~~~~~~~   93 (342)
T d1yfqa_          80 ---EILKVDLIGSPSFQ   93 (342)
T ss_dssp             ---CEEEECSSSSSSEE
T ss_pred             ---ceeeeecccccccc
Confidence               99999988665443

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.41  E-value=1.6e-12  Score=89.30  Aligned_cols=110  Identities=11%  Similarity=0.064  Sum_probs=84.3

Q ss_pred             EEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecC-CCCCEEEEEEccCCCEE-EEEeCCCcEEEEECCcc-----c
Q psy7062          18 VFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEG-VSKNVVEVGFQEDGKWM-FTGGEDCRARIWDLSLC-----F   90 (148)
Q Consensus        18 ~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~-~~~~i~~~~~sp~~~~l-~~~~~~~~i~l~d~~~~-----~   90 (148)
                      +|+++  +++|++++.+++|.+||+++.  +.+.+++. +...+.+++|+|||+++ +++..++.+.+||+.++     +
T Consensus         3 a~~~~--~~~l~~~~~~~~v~v~D~~t~--~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~   78 (346)
T d1jmxb_           3 ALKAG--HEYMIVTNYPNNLHVVDVASD--TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHA   78 (346)
T ss_dssp             CCCTT--CEEEEEEETTTEEEEEETTTT--EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred             cCCCC--CcEEEEEcCCCEEEEEECCCC--CEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeee
Confidence            45555  899999999999999999998  88887763 45668899999999987 55567899999999887     1


Q ss_pred             c---------ccceEEEEccCCCEEEEEecCCc------eecCeeEEEeecCCCcc
Q psy7062          91 I---------QQVNALRITPDKQLLASAEELSC------CYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        91 ~---------~~i~~~~~sp~~~~l~~~~~d~~------~~~~~~i~~~d~~~~~~  131 (148)
                      .         ..+..++|+|||+++++++.+..      ......+.+||..+...
T Consensus        79 ~~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  134 (346)
T d1jmxb_          79 NLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLE  134 (346)
T ss_dssp             ESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGG
T ss_pred             cccccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEeccccee
Confidence            1         34678999999999888764331      11234678888765543

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.31  E-value=2.2e-11  Score=83.18  Aligned_cols=106  Identities=12%  Similarity=-0.026  Sum_probs=81.7

Q ss_pred             cEEEEEecCCeEEEEeCCCCCCCceEEecC--CCCCEEEEEEccCCCEE-EEEeCCCcEEEEECCcc-----cc------
Q psy7062          26 EMVAALGGYQHIRMYDFGSNNPNPVINCEG--VSKNVVEVGFQEDGKWM-FTGGEDCRARIWDLSLC-----FI------   91 (148)
Q Consensus        26 ~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~--~~~~i~~~~~sp~~~~l-~~~~~~~~i~l~d~~~~-----~~------   91 (148)
                      +++++++.|++|.+||+++.  +.+..+..  +...+..++++|||+++ ++++.++.|.+||+.++     +.      
T Consensus         2 ~~~vt~~~d~~v~v~D~~s~--~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~   79 (337)
T d1pbyb_           2 DYILAPARPDKLVVIDTEKM--AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEE   79 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTT--EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTE
T ss_pred             eEEEEEcCCCEEEEEECCCC--eEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCcc
Confidence            67899999999999999998  78877764  34567899999999987 56678899999999887     11      


Q ss_pred             --ccceEEEEccCCCEEEEEecCCce------ecCeeEEEeecCCCccee
Q psy7062          92 --QQVNALRITPDKQLLASAEELSCC------YCGAAVFVYNSCYPAAVV  133 (148)
Q Consensus        92 --~~i~~~~~sp~~~~l~~~~~d~~~------~~~~~i~~~d~~~~~~~~  133 (148)
                        ..+..++|+|+++.++.+..+...      .....+.+||..+.....
T Consensus        80 ~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~  129 (337)
T d1pbyb_          80 RVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRK  129 (337)
T ss_dssp             EEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEE
T ss_pred             cccceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEE
Confidence              456789999999999888754321      123467888887665443

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.30  E-value=2.2e-11  Score=87.80  Aligned_cols=111  Identities=10%  Similarity=-0.016  Sum_probs=82.1

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEec---CCCCCEEEEEEccCCCEE-EEEeCCCcEEEEECCc
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCE---GVSKNVVEVGFQEDGKWM-FTGGEDCRARIWDLSL   88 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~---~~~~~i~~~~~sp~~~~l-~~~~~~~~i~l~d~~~   88 (148)
                      .+..++|+|+  |+++++++.|+++++||+.+.+......++   .|...+.+..|+|||+++ +++..++++++||..+
T Consensus        63 ~~~~v~fSpD--G~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t  140 (432)
T d1qksa2          63 AVHISRLSAS--GRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGET  140 (432)
T ss_dssp             CEEEEEECTT--SCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTT
T ss_pred             CeeEEEECCC--CCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCeEEecccCCCCCEEEEEcCCCCeEEEEeCcc
Confidence            4678899998  999999999999999999987333344433   344555566778899976 6788899999999987


Q ss_pred             c-----c------------c--ccceEEEEccCCCEEEEEe-cCCceecCeeEEEeecCCCcc
Q psy7062          89 C-----F------------I--QQVNALRITPDKQLLASAE-ELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        89 ~-----~------------~--~~i~~~~~sp~~~~l~~~~-~d~~~~~~~~i~~~d~~~~~~  131 (148)
                      +     +            .  .....+.++|+++.++.+. .++      .|.+||..+.+.
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~------~i~~~d~~~~~~  197 (432)
T d1qksa2         141 LEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETG------KILLVDYTDLNN  197 (432)
T ss_dssp             CCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTT------EEEEEETTCSSE
T ss_pred             ccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCC------eEEEEEccCCCc
Confidence            6     1            0  4456678899888765544 434      788898776553

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.29  E-value=2.2e-11  Score=83.36  Aligned_cols=96  Identities=11%  Similarity=0.130  Sum_probs=71.3

Q ss_pred             EEEEEecCCeEEEEeCCCCCCCceEEe--cCCCCCEEEEEEccCCCEEEEEe-CCCcEEEEECCcc---cc--------c
Q psy7062          27 MVAALGGYQHIRMYDFGSNNPNPVINC--EGVSKNVVEVGFQEDGKWMFTGG-EDCRARIWDLSLC---FI--------Q   92 (148)
Q Consensus        27 ~l~~~~~d~~v~~~d~~~~~~~~~~~~--~~~~~~i~~~~~sp~~~~l~~~~-~~~~i~l~d~~~~---~~--------~   92 (148)
                      .+++++++++|++|+++..  ..+..+  ..|...+..++|+|||++|++++ .++.+++|++...   +.        .
T Consensus         6 v~v~~~~~~~I~v~~~~~~--~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~   83 (333)
T d1ri6a_           6 VYIASPESQQIHVWNLNHE--GALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG   83 (333)
T ss_dssp             EEEEEGGGTEEEEEEECTT--SCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS
T ss_pred             EEEECCCCCcEEEEEEcCC--CCeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCC
Confidence            3466678999999999765  333222  24788899999999999886655 4799999998754   11        5


Q ss_pred             cceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          93 QVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        93 ~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                      .+..++|+|||++|++++.++     ..+.+|+....
T Consensus        84 ~p~~l~~spDg~~l~v~~~~~-----~~v~~~~~~~~  115 (333)
T d1ri6a_          84 SLTHISTDHQGQFVFVGSYNA-----GNVSVTRLEDG  115 (333)
T ss_dssp             CCSEEEECTTSSEEEEEETTT-----TEEEEEEEETT
T ss_pred             CceEEEEcCCCCEEeecccCC-----Cceeeeccccc
Confidence            678899999999999987533     26777775543

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.27  E-value=1.2e-10  Score=78.46  Aligned_cols=100  Identities=15%  Similarity=0.137  Sum_probs=77.6

Q ss_pred             EEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEE-EEEeCCCcEEEEECCcc-----cc--ccceEEEE
Q psy7062          28 VAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWM-FTGGEDCRARIWDLSLC-----FI--QQVNALRI   99 (148)
Q Consensus        28 l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l-~~~~~~~~i~l~d~~~~-----~~--~~i~~~~~   99 (148)
                      .++.+.+++|.+||++++  +.+.++. ....+..++++|||+++ +++..++.|++||+.+.     +.  ..+..+.|
T Consensus         5 yV~~~~~~~v~v~D~~t~--~~~~~i~-~g~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~~~~~~~~   81 (301)
T d1l0qa2           5 YIANSESDNISVIDVTSN--KVTATIP-VGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAV   81 (301)
T ss_dssp             EEEETTTTEEEEEETTTT--EEEEEEE-CSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEE
T ss_pred             EEEECCCCEEEEEECCCC--eEEEEEE-CCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeecccccccccc
Confidence            455578899999999998  8888886 34567899999999977 56677899999999887     22  66788999


Q ss_pred             ccCCCEEEEEecCCceecCeeEEEeecCCCcceecc
Q psy7062         100 TPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVAS  135 (148)
Q Consensus       100 sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~  135 (148)
                      ++++..++.++.++     ..+.+||..+.+.....
T Consensus        82 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~  112 (301)
T d1l0qa2          82 SPDGKQVYVTNMAS-----STLSVIDTTSNTVAGTV  112 (301)
T ss_dssp             CTTSSEEEEEETTT-----TEEEEEETTTTEEEEEE
T ss_pred             cccccccccccccc-----ceeeecccccceeeeec
Confidence            99998776665432     27889998876655443

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.15  E-value=2.2e-09  Score=72.07  Aligned_cols=112  Identities=11%  Similarity=0.048  Sum_probs=81.4

Q ss_pred             cEEEEEeCCCCccEEEEEec-CCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEe---CCCcEEEEECCcc
Q psy7062          14 QISTVFDSKHLVEMVAALGG-YQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGG---EDCRARIWDLSLC   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~-d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~---~~~~i~l~d~~~~   89 (148)
                      +..++++++  +..+++++. ++.+.+|+....  +...... ....+..+.+++++..++.++   .++.+++||+.+.
T Consensus       160 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~  234 (301)
T d1l0qa2         160 PKGIAVTPD--GTKVYVANFDSMSISVIDTVTN--SVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTN  234 (301)
T ss_dssp             EEEEEECTT--SSEEEEEETTTTEEEEEETTTT--EEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTT
T ss_pred             ceEEEeecc--ccceeeecccccccccccccce--eeeeccc-ccCCcceeeccccccccccccccceeeeeeeeecCCC
Confidence            567777776  455555454 467888888766  5555554 456678899999999776554   3468999999887


Q ss_pred             -----cc--ccceEEEEccCCCEEE-EEecCCceecCeeEEEeecCCCcceeccC
Q psy7062          90 -----FI--QQVNALRITPDKQLLA-SAEELSCCYCGAAVFVYNSCYPAAVVASN  136 (148)
Q Consensus        90 -----~~--~~i~~~~~sp~~~~l~-~~~~d~~~~~~~~i~~~d~~~~~~~~~~~  136 (148)
                           +.  ..+..++|+|||++|+ +++.++      +|++||+.+.+....+.
T Consensus       235 ~~~~~~~~~~~~~~va~spdg~~l~va~~~~~------~i~v~D~~t~~~~~~~~  283 (301)
T d1l0qa2         235 KITARIPVGPDPAGIAVTPDGKKVYVALSFCN------TVSVIDTATNTITATMA  283 (301)
T ss_dssp             EEEEEEECCSSEEEEEECTTSSEEEEEETTTT------EEEEEETTTTEEEEEEE
T ss_pred             eEEEEEcCCCCEEEEEEeCCCCEEEEEECCCC------eEEEEECCCCeEEEEEe
Confidence                 22  6788999999999875 555656      89999999887665553

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.09  E-value=2.1e-09  Score=73.15  Aligned_cols=107  Identities=14%  Similarity=0.153  Sum_probs=81.7

Q ss_pred             cEEEEEeCCCCccEE-EEEecCCeEEEEeCCCCCCCceEEecCCC-----CCEEEEEEccCCCEEEEEeC----------
Q psy7062          14 QISTVFDSKHLVEMV-AALGGYQHIRMYDFGSNNPNPVINCEGVS-----KNVVEVGFQEDGKWMFTGGE----------   77 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l-~~~~~d~~v~~~d~~~~~~~~~~~~~~~~-----~~i~~~~~sp~~~~l~~~~~----------   77 (148)
                      +..++|+|+  |+++ ++++.++.|.+||++++  +.+..+..+.     ..+..++++|+++.++.+..          
T Consensus        36 ~~~i~~spD--g~~l~v~~~~~~~v~v~D~~t~--~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~  111 (337)
T d1pbyb_          36 PMVPMVAPG--GRIAYATVNKSESLVKIDLVTG--ETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFE  111 (337)
T ss_dssp             CCCEEECTT--SSEEEEEETTTTEEEEEETTTC--CEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEE
T ss_pred             ccEEEECCC--CCEEEEEECCCCeEEEEECCCC--cEEEEEecCCCcccccceeeEEEcCCCcEEEEeecCCcceeeecc
Confidence            457889988  7766 56567899999999998  7777765543     23457899999999887763          


Q ss_pred             --CCcEEEEECCcc-----cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062          78 --DCRARIWDLSLC-----FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV  132 (148)
Q Consensus        78 --~~~i~l~d~~~~-----~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~  132 (148)
                        +..+.+||..+.     +.  ..+..++|+|+++++++++.        .+.+||..+.+..
T Consensus       112 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~--------~~~~~d~~~~~~~  167 (337)
T d1pbyb_         112 VQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGR--------DLHVMDPEAGTLV  167 (337)
T ss_dssp             ECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEESS--------SEEEEETTTTEEE
T ss_pred             ccccceeeccccCCeEEEeccccCCceEEEEcCCCCEEEEEcC--------CcceeeeecCcEE
Confidence              567889999887     22  66888999999999998875        4667887765433

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.08  E-value=1.2e-09  Score=78.04  Aligned_cols=109  Identities=11%  Similarity=0.032  Sum_probs=74.3

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEec---CCCCCEEEEEEccCCCEEEE-EeCCCcEEEEECCc
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCE---GVSKNVVEVGFQEDGKWMFT-GGEDCRARIWDLSL   88 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~---~~~~~i~~~~~sp~~~~l~~-~~~~~~i~l~d~~~   88 (148)
                      .+..++|+|+  |+++++++.|+++++||+.+++......+.   +|...+.+++|+|||+++++ +..++.+++||...
T Consensus        63 ~~~~vafSPD--Gk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~  140 (426)
T d1hzua2          63 AVHISRMSAS--GRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGET  140 (426)
T ss_dssp             SEEEEEECTT--SCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTT
T ss_pred             CeeEEEECCC--CCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcceEEeeeecCCCCEEEEeecCCCeEEEEcCCc
Confidence            4678899998  899999899999999999988322333332   35556667778899998755 45789999999987


Q ss_pred             c-----cc--------------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062          89 C-----FI--------------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        89 ~-----~~--------------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                      .     +.              .....+.+++++..++....+.     ..+.+++...
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~-----~~i~~~~~~~  194 (426)
T d1hzua2         141 LEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKET-----GKVLLVNYKD  194 (426)
T ss_dssp             CCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTT-----TEEEEEECSS
T ss_pred             cceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCC-----CeEEEEEecc
Confidence            6     11              2234455666666655554422     2455555443

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=98.93  E-value=5.2e-09  Score=71.34  Aligned_cols=102  Identities=10%  Similarity=-0.051  Sum_probs=78.0

Q ss_pred             cEEEEEecCCeEEEEeCCCCCCCce-EEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc--ccceEE
Q psy7062          26 EMVAALGGYQHIRMYDFGSNNPNPV-INCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI--QQVNAL   97 (148)
Q Consensus        26 ~~l~~~~~d~~v~~~d~~~~~~~~~-~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~--~~i~~~   97 (148)
                      ..++++..+..+.+||..++  ... .....+...+..+.+++++..++.... +.+.+||..++     +.  ..+.++
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~v~d~~~~~~~~~~~~~~~~~~v  297 (346)
T d1jmxb_         221 QDPATADLLYGYLSVDLKTG--KTHTQEFADLTELYFTGLRSPKDPNQIYGVL-NRLAKYDLKQRKLIKAANLDHTYYCV  297 (346)
T ss_dssp             ---CCCEEEEEEEEEETTTC--CEEEEEEEECSSCEEEEEECSSCTTEEEEEE-SEEEEEETTTTEEEEEEECSSCCCEE
T ss_pred             eeEeeccCCceEEEEECCCC--ceEEEEeecccceeEEEEEeCCCCEEEEecC-CeEEEEECCCCcEEEEEcCCCCEEEE
Confidence            33445456667999999887  433 344557888889999998887776654 57999999887     22  678999


Q ss_pred             EEccCCCEEEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062          98 RITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVVASN  136 (148)
Q Consensus        98 ~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~  136 (148)
                      +|+|||+++++++.|+      .|++||..+.+.+..+.
T Consensus       298 a~s~DG~~l~v~~~d~------~v~v~D~~t~~~i~~i~  330 (346)
T d1jmxb_         298 AFDKKGDKLYLGGTFN------DLAVFNPDTLEKVKNIK  330 (346)
T ss_dssp             EECSSSSCEEEESBSS------EEEEEETTTTEEEEEEE
T ss_pred             EEcCCCCEEEEEeCCC------cEEEEECccCCEEEEEE
Confidence            9999999999999887      89999999887765443

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=98.90  E-value=1.8e-08  Score=68.54  Aligned_cols=109  Identities=9%  Similarity=0.111  Sum_probs=78.1

Q ss_pred             cEEEEEeCCCCccEEEEEe-cCCeEEEEeCCCCCCCc-eEEecCCCCCEEEEEEccCCCEEEEEeC-CCcEEEEECCcc-
Q psy7062          14 QISTVFDSKHLVEMVAALG-GYQHIRMYDFGSNNPNP-VINCEGVSKNVVEVGFQEDGKWMFTGGE-DCRARIWDLSLC-   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~-~d~~v~~~d~~~~~~~~-~~~~~~~~~~i~~~~~sp~~~~l~~~~~-~~~i~l~d~~~~-   89 (148)
                      ...++|+|+  |++|++++ .++.|.+|++....... +.....+...+..++|+|||+++++++. ++.+.+|+.... 
T Consensus        39 v~~la~spD--G~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~  116 (333)
T d1ri6a_          39 VQPMVVSPD--KRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGL  116 (333)
T ss_dssp             CCCEEECTT--SSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTE
T ss_pred             EeEEEEeCC--CCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCCceEEEEcCCCCEEeecccCCCceeeecccccc
Confidence            468899998  78775544 57899999998652121 1111224556778999999999988876 568888887655 


Q ss_pred             ----cc-----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          90 ----FI-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        90 ----~~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                          ..     ..+.++.++|+++.++.++.+.     ..|.+|+....
T Consensus       117 ~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~-----~~i~~~~~~~~  160 (333)
T d1ri6a_         117 PVGVVDVVEGLDGCHSANISPDNRTLWVPALKQ-----DRICLFTVSDD  160 (333)
T ss_dssp             EEEEEEEECCCTTBCCCEECTTSSEEEEEEGGG-----TEEEEEEECTT
T ss_pred             ceecccccCCCccceEEEeeecceeeecccccc-----ceeeEEEeccC
Confidence                11     5678899999999888887533     26888886643

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.83  E-value=3.4e-08  Score=70.99  Aligned_cols=104  Identities=14%  Similarity=0.133  Sum_probs=78.3

Q ss_pred             EEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEec-----CCCCCEEEEEEccCCCEEEEEeC---------CCcE
Q psy7062          16 STVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCE-----GVSKNVVEVGFQEDGKWMFTGGE---------DCRA   81 (148)
Q Consensus        16 ~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~-----~~~~~i~~~~~sp~~~~l~~~~~---------~~~i   81 (148)
                      .+.|.++  ++++.  ..++.+.+||+.++  +....+.     .|...|.+..|||||++++.++.         ++.+
T Consensus        21 ~~~W~~d--~~~~~--~~~~~~~~~~~~t~--~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~   94 (470)
T d2bgra1          21 SLRWISD--HEYLY--KQENNILVFNAEYG--NSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASY   94 (470)
T ss_dssp             CCEECSS--SEEEE--ESSSCEEEEETTTC--CEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEE
T ss_pred             CCEeCCC--CEEEE--EcCCcEEEEECCCC--CEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceE
Confidence            4556665  66655  45788999999998  5444343     34577999999999999988753         4678


Q ss_pred             EEEECCcc----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcce
Q psy7062          82 RIWDLSLC----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAV  132 (148)
Q Consensus        82 ~l~d~~~~----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~  132 (148)
                      ++||+.++    +.   ..+..+.|||||+.++.... .      .+++|+.......
T Consensus        95 ~l~d~~~~~~~~l~~~~~~~~~~~~SPDG~~ia~~~~-~------~l~~~~~~~g~~~  145 (470)
T d2bgra1          95 DIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWN-N------DIYVKIEPNLPSY  145 (470)
T ss_dssp             EEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEET-T------EEEEESSTTSCCE
T ss_pred             EEEECCCCcccccccCCccccccccccCcceeeEeec-c------cceEEECCCCcee
Confidence            99999988    22   67889999999999988653 3      6899998766544

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.82  E-value=2.8e-08  Score=68.22  Aligned_cols=101  Identities=14%  Similarity=-0.020  Sum_probs=73.3

Q ss_pred             ccEEEEEe-----cCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEE----------eCCCcEEEEECCcc
Q psy7062          25 VEMVAALG-----GYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTG----------GEDCRARIWDLSLC   89 (148)
Q Consensus        25 ~~~l~~~~-----~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~----------~~~~~i~l~d~~~~   89 (148)
                      +..+++..     .++++.+||..++  +.+.++..+..  ..++|||||+.++..          ..++.|++||..++
T Consensus        13 g~~~~v~~~~~~~~~~~v~v~D~~tg--~~~~~~~~g~~--~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t~   88 (355)
T d2bbkh_          13 ARRVYVNDPAHFAAVTQQFVIDGEAG--RVIGMIDGGFL--PNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTL   88 (355)
T ss_dssp             TTEEEEEECGGGCSSEEEEEEETTTT--EEEEEEEECSS--CEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred             CCEEEEEecccCCCcCeEEEEECCCC--cEEEEEECCCC--CceEEcCCCCEEEEEeCCCccccccCCCCEEEEEECCCC
Confidence            66655532     3447999999998  78888765433  368999999977654          34788999999877


Q ss_pred             -----cc----------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCccee
Q psy7062          90 -----FI----------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVV  133 (148)
Q Consensus        90 -----~~----------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~  133 (148)
                           +.          .....++|+|++++++.++...    ...+.+||..+.+...
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~----~~~~~~~~~~~~~~~~  143 (355)
T d2bbkh_          89 LPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSP----APAVGVVDLEGKAFKR  143 (355)
T ss_dssp             CEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSS----SCEEEEEETTTTEEEE
T ss_pred             CEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCC----CceeeeeecCCCcEee
Confidence                 11          3456789999999888876543    3478899988766543

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=98.73  E-value=1.6e-07  Score=64.86  Aligned_cols=107  Identities=11%  Similarity=-0.088  Sum_probs=74.3

Q ss_pred             cEEEEEeCCCCccEEEEEe-----cCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEe----------CC
Q psy7062          14 QISTVFDSKHLVEMVAALG-----GYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGG----------ED   78 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~-----~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~----------~~   78 (148)
                      ....+++|+  ++.++...     ..+.+.+||.+++  +.+.++..+..  ..+.|+|||+.+++++          .+
T Consensus        23 ~~~~a~spd--g~~~~~~~~~~~~~~~~v~v~D~~tg--~~~~~~~~~~~--~~~a~SpDG~~l~va~~~~~~~~~~~~~   96 (373)
T d2madh_          23 TNDEAPGAD--GRRSYINLPAHHSAIIQQWVLDAGSG--SILGHVNGGFL--PNPVAAHSGSEFALASTSFSRIAKGKRT   96 (373)
T ss_pred             ccccccCCC--CCEEEEEcccccCCCceEEEEECCCC--CEEEEEeCCCC--ccEEEcCCCCEEEEEeecCCcccccccc
Confidence            355666777  66665522     2357999999998  88888775543  3689999999998864          35


Q ss_pred             CcEEEEECCcc-----cc----------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          79 CRARIWDLSLC-----FI----------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        79 ~~i~l~d~~~~-----~~----------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                      +.+.+||..+.     +.          .....+.|+|+++.++....+.    ...+.+|+....+
T Consensus        97 ~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~----~~~~~~~~~~~~~  159 (373)
T d2madh_          97 DYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAA----GPAVGLVVQGGSS  159 (373)
T ss_pred             eEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcC----CCceEEeeccCCe
Confidence            78999999887     11          2335678899988777665443    3357777765443

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.70  E-value=2e-08  Score=68.95  Aligned_cols=106  Identities=9%  Similarity=0.114  Sum_probs=73.1

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEecCCC----------CCEEEEEEccCCCEEEEEeCC----------CcEEEE
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVS----------KNVVEVGFQEDGKWMFTGGED----------CRARIW   84 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~----------~~i~~~~~sp~~~~l~~~~~~----------~~i~l~   84 (148)
                      +..++.++.++.+.+|++..+....+.....+.          .....+++++++..++....+          ..+.+|
T Consensus       206 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~  285 (355)
T d2bbkh_         206 AGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVL  285 (355)
T ss_dssp             TTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEE
T ss_pred             CCeEEEecCCCeEEEEecCCCcEEEEeccCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEE
Confidence            445566688999999999887322222222221          223457889999877665432          369999


Q ss_pred             ECCcc-----cc--ccceEEEEccCCCE--EEEEecCCceecCeeEEEeecCCCcceeccC
Q psy7062          85 DLSLC-----FI--QQVNALRITPDKQL--LASAEELSCCYCGAAVFVYNSCYPAAVVASN  136 (148)
Q Consensus        85 d~~~~-----~~--~~i~~~~~sp~~~~--l~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~  136 (148)
                      |..++     +.  ..+.+++|+|||+.  ++++..|+      +|++||..+.+.+..+.
T Consensus       286 d~~t~~~~~~~~~~~~~~~~a~spDG~~~l~v~~~~d~------~i~v~D~~tg~~~~~i~  340 (355)
T d2bbkh_         286 DAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDK------TLYIHDAESGEELRSVN  340 (355)
T ss_dssp             ETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTT------EEEEEETTTCCEEEEEC
T ss_pred             eCCCCcEEEEecCCCCEEEEEEcCCCCeEEEEEECCCC------EEEEEECCCCCEEEEEe
Confidence            99887     22  66889999999983  34455556      89999999998877664

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.62  E-value=1.3e-07  Score=67.79  Aligned_cols=94  Identities=14%  Similarity=0.050  Sum_probs=73.0

Q ss_pred             cEEEEEeCCCCccEEEEEec---------CCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEE
Q psy7062          14 QISTVFDSKHLVEMVAALGG---------YQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIW   84 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~---------d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~   84 (148)
                      ...+.|+|+  ++.|+.+++         ++.+.+||++++   .+..+..+...+..+.|||||+.++.. .++.+.+|
T Consensus        64 i~~~~~SpD--g~~i~~~~~~~~~~r~s~~~~~~l~d~~~~---~~~~l~~~~~~~~~~~~SPDG~~ia~~-~~~~l~~~  137 (470)
T d2bgra1          64 INDYSISPD--GQFILLEYNYVKQWRHSYTASYDIYDLNKR---QLITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVK  137 (470)
T ss_dssp             CCEEEECTT--SSEEEEEEEEEECSSSCEEEEEEEEETTTT---EECCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEE
T ss_pred             cceeEECCC--CCEEEEEECCcceeeeccCceEEEEECCCC---cccccccCCccccccccccCcceeeEe-ecccceEE
Confidence            357788888  788887653         357889999987   456677788899999999999999885 46789999


Q ss_pred             ECCcc----cc----------------------ccceEEEEccCCCEEEEEecCC
Q psy7062          85 DLSLC----FI----------------------QQVNALRITPDKQLLASAEELS  113 (148)
Q Consensus        85 d~~~~----~~----------------------~~i~~~~~sp~~~~l~~~~~d~  113 (148)
                      +...+    +.                      .....+.|||||+.|+....|.
T Consensus       138 ~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~d~  192 (470)
T d2bgra1         138 IEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFND  192 (470)
T ss_dssp             SSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEEC
T ss_pred             ECCCCceeeeeeccCCCcccccccceeeeeeecCCccccEECCCCCccceeEecC
Confidence            98766    10                      2345678999999999987654

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=98.59  E-value=2.3e-06  Score=58.86  Aligned_cols=113  Identities=12%  Similarity=0.049  Sum_probs=73.5

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEecCCC----------CCEEEEEEccCCCEEE----------EEeCCCcEEEE
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVS----------KNVVEVGFQEDGKWMF----------TGGEDCRARIW   84 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~----------~~i~~~~~sp~~~~l~----------~~~~~~~i~l~   84 (148)
                      +.+++. +.++.+.+|+..............+.          .....+++++++..++          ....++.+.+|
T Consensus       225 ~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~  303 (373)
T d2madh_         225 GRIVWP-VYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSV  303 (373)
T ss_pred             ceEEEe-cCCceEEEEEcCCCeEEEEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEE
Confidence            555544 77889999998876222222222221          2234456666665443          34456788999


Q ss_pred             ECCcc-----cc--ccceEEEEccCCCEE--EEEecCCceecCeeEEEeecCCCcceeccCc-ccCccee
Q psy7062          85 DLSLC-----FI--QQVNALRITPDKQLL--ASAEELSCCYCGAAVFVYNSCYPAAVVASNT-LVKPQVT  144 (148)
Q Consensus        85 d~~~~-----~~--~~i~~~~~sp~~~~l--~~~~~d~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~  144 (148)
                      |..++     +.  ..+..++|+|||+.+  ++++.|+      +|++||..+.+.+..+.. --.|...
T Consensus       304 d~~t~~~~~~~~~~~~~~~~a~spDG~~~l~vt~~~d~------~v~v~D~~tg~~~~~~~~~g~~P~~l  367 (373)
T d2madh_         304 TGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTE------VLHIYDAGAGDQDQSTVELGSGPQVL  367 (373)
T ss_pred             ECCCCcEEEEecCCCCeeEEEECCCCCEEEEEEeCCCC------eEEEEECCCCCEEEEECCCCCCCcEE
Confidence            99887     22  778899999999853  4566666      899999999988777653 3445443

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.40  E-value=7.9e-07  Score=61.71  Aligned_cols=89  Identities=9%  Similarity=-0.128  Sum_probs=65.8

Q ss_pred             eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEe----------CCCcEEEEECCcc-----cc---------
Q psy7062          36 HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGG----------EDCRARIWDLSLC-----FI---------   91 (148)
Q Consensus        36 ~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~----------~~~~i~l~d~~~~-----~~---------   91 (148)
                      .+.++|..++  +.+.....+...  .++|+|||+.++..+          .++.|++||..+.     +.         
T Consensus        47 ~~~~~d~~~~--~~~~~~~~~~~~--~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~  122 (368)
T d1mdah_          47 ENWVSCAGCG--VTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSV  122 (368)
T ss_dssp             EEEEEETTTT--EEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCB
T ss_pred             eEEEEeCCCC--cEEEEEeCCCCC--cceECCCCCEEEEEcccCccccccccCCeEEEEECCCCcEeeeecCCccceecc
Confidence            4677788888  777777655543  588999999887654          3677999999876     11         


Q ss_pred             -ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCccee
Q psy7062          92 -QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAAVV  133 (148)
Q Consensus        92 -~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~~~  133 (148)
                       .....++|+|||+++++++.+.     ..+.+||+.+.+...
T Consensus       123 g~~p~~~a~SpDGk~l~va~~~~-----~~v~~~d~~~~~~~~  160 (368)
T d1mdah_         123 GPRVHIIGNCASSACLLFFLFGS-----SAAAGLSVPGASDDQ  160 (368)
T ss_dssp             SCCTTSEEECTTSSCEEEEECSS-----SCEEEEEETTTEEEE
T ss_pred             cCCccceEECCCCCEEEEEeCCC-----CeEEEEECCCCcEeE
Confidence             2345799999999998876432     279999988766544

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.29  E-value=1.8e-06  Score=59.85  Aligned_cols=72  Identities=11%  Similarity=-0.066  Sum_probs=53.6

Q ss_pred             cEEEEEeCCCCccEEEEEe----------cCCeEEEEeCCCCCCCceEEecCCC-------CCEEEEEEccCCCEEEEEe
Q psy7062          14 QISTVFDSKHLVEMVAALG----------GYQHIRMYDFGSNNPNPVINCEGVS-------KNVVEVGFQEDGKWMFTGG   76 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~----------~d~~v~~~d~~~~~~~~~~~~~~~~-------~~i~~~~~sp~~~~l~~~~   76 (148)
                      ...++|+++  ++.+++.+          .+++|.+||..+.  +.+..+..+.       .....++|+|||++++.++
T Consensus        67 ~~~~a~spD--g~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~--~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~  142 (368)
T d1mdah_          67 LSLAVAGHS--GSDFALASTSFARSAKGKRTDYVEVFDPVTF--LPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFL  142 (368)
T ss_dssp             TCEEEECTT--SSCEEEEEEEETTTTSSSEEEEEEEECTTTC--CEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEE
T ss_pred             CCcceECCC--CCEEEEEcccCccccccccCCeEEEEECCCC--cEeeeecCCccceecccCCccceEECCCCCEEEEEe
Confidence            456888888  77777644          3567999999998  6666654322       1233589999999988776


Q ss_pred             C-CCcEEEEECCcc
Q psy7062          77 E-DCRARIWDLSLC   89 (148)
Q Consensus        77 ~-~~~i~l~d~~~~   89 (148)
                      . ++.+.+||+.+.
T Consensus       143 ~~~~~v~~~d~~~~  156 (368)
T d1mdah_         143 FGSSAAAGLSVPGA  156 (368)
T ss_dssp             CSSSCEEEEEETTT
T ss_pred             CCCCeEEEEECCCC
Confidence            4 689999999887

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=98.23  E-value=2.3e-05  Score=53.05  Aligned_cols=104  Identities=14%  Similarity=0.095  Sum_probs=77.4

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----   89 (148)
                      ...++++++  |+++++...+++|..++....    ...+......+.+++++++|+++++...++.+..++....    
T Consensus        30 ~e~iAv~pd--G~l~vt~~~~~~I~~i~p~g~----~~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~  103 (302)
T d2p4oa1          30 LENLASAPD--GTIFVTNHEVGEIVSITPDGN----QQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV  103 (302)
T ss_dssp             EEEEEECTT--SCEEEEETTTTEEEEECTTCC----EEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE
T ss_pred             cCCEEECCC--CCEEEEeCCCCEEEEEeCCCC----EEEEEcCCCCcceEEEcCCCCeEEEecCCceEEEEEecccccce
Confidence            356788888  889999778889988887643    3333445678999999999998888888888887776443    


Q ss_pred             --c---c--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          90 --F---I--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        90 --~---~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                        +   .  .....+.+.++++.+++-+.++      .+..+|....
T Consensus       104 ~~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~------~i~~~~~~~~  144 (302)
T d2p4oa1         104 ETLLTLPDAIFLNGITPLSDTQYLTADSYRG------AIWLIDVVQP  144 (302)
T ss_dssp             EEEEECTTCSCEEEEEESSSSEEEEEETTTT------EEEEEETTTT
T ss_pred             eeccccCCccccceeEEccCCCEEeeccccc------cceeeeccCC
Confidence              1   1  5577889999999888776655      6666665543

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.11  E-value=4.3e-05  Score=50.19  Aligned_cols=103  Identities=9%  Similarity=0.025  Sum_probs=66.2

Q ss_pred             CCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeC-C-----CcEEEEECCcc----c
Q psy7062          21 SKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE-D-----CRARIWDLSLC----F   90 (148)
Q Consensus        21 ~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-~-----~~i~l~d~~~~----~   90 (148)
                      |+-.|+.++- ..++.|.+.|++++  + ...+..+........|||||+.++.... +     ..+.+++...+    +
T Consensus         8 Pdi~G~~v~f-~~~~dl~~~d~~~g--~-~~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~l   83 (281)
T d1k32a2           8 PDIHGDRIIF-VCCDDLWEHDLKSG--S-TRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRI   83 (281)
T ss_dssp             EEEETTEEEE-EETTEEEEEETTTC--C-EEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEEC
T ss_pred             CCCCCCEEEE-EeCCcEEEEECCCC--C-EEEEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEEe
Confidence            4423666666 45677888899987  4 4456656777889999999998875432 2     23667777666    2


Q ss_pred             c----------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          91 I----------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        91 ~----------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                      .          .......|+|+++.|+.................+..
T Consensus        84 t~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~  130 (281)
T d1k32a2          84 TYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVEND  130 (281)
T ss_dssp             CCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGG
T ss_pred             eecCCCccCccccccccccCCCCCEEEEEEccCCCccceeeeeecCC
Confidence            1          345677899999988876543322222334444443

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.07  E-value=0.00017  Score=48.10  Aligned_cols=106  Identities=12%  Similarity=0.241  Sum_probs=75.9

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEec--CCCCCEEEEEEccCCCEEEEEeC-CCcEEEEECCcc-
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCE--GVSKNVVEVGFQEDGKWMFTGGE-DCRARIWDLSLC-   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~--~~~~~i~~~~~sp~~~~l~~~~~-~~~i~l~d~~~~-   89 (148)
                      ...++++++  ++++++....+.|.+||...   +.+.++.  +......++++.++|+.+++-.. ++.|.+|+..-. 
T Consensus       159 ~~~i~~d~~--g~i~v~d~~~~~V~~~d~~G---~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~~G~~  233 (279)
T d1q7fa_         159 PNGVVVNDK--QEIFISDNRAHCVKVFNYEG---QYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQL  233 (279)
T ss_dssp             EEEEEECSS--SEEEEEEGGGTEEEEEETTC---CEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCE
T ss_pred             cceeeeccc--eeEEeeeccccceeeeecCC---ceeeeecccccccCCcccccccCCeEEEEECCCCcEEEEECCCCCE
Confidence            456667766  77888877778999999865   4566663  34556889999999997776544 457899986433 


Q ss_pred             ---cc-----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          90 ---FI-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        90 ---~~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                         +.     .....+++.|+|++++ ++.+.      +|++|......+
T Consensus       234 ~~~~~~~~~~~~p~~vav~~dG~l~V-~~~n~------~v~~fr~~~~~~  276 (279)
T d1q7fa_         234 ISALESKVKHAQCFDVALMDDGSVVL-ASKDY------RLYIYRYVQLAP  276 (279)
T ss_dssp             EEEEEESSCCSCEEEEEEETTTEEEE-EETTT------EEEEEECSCCCC
T ss_pred             EEEEeCCCCCCCEeEEEEeCCCcEEE-EeCCC------eEEEEEeeeecC
Confidence               21     4578899999997544 55555      899999876543

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.88  E-value=0.00046  Score=45.36  Aligned_cols=106  Identities=11%  Similarity=0.002  Sum_probs=75.0

Q ss_pred             cCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--
Q psy7062          12 FGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--   89 (148)
Q Consensus        12 ~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--   89 (148)
                      ..+..++++++  ++++++...++.+..+|.+..  .........-....++++.++|+++++....+.+..++....  
T Consensus       140 ~~p~~i~~~~~--g~~~v~~~~~~~i~~~d~~~~--~~~~~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~~  215 (260)
T d1rwia_         140 NDPDGVAVDNS--GNVYVTDTDNNRVVKLEAESN--NQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS  215 (260)
T ss_dssp             CSCCEEEECTT--CCEEEEEGGGTEEEEECTTTC--CEEECCCSSCCSEEEEEECTTCCEEEEETTTTEEEEECTTCSCC
T ss_pred             CCcceeeecCC--CCEeeeccccccccccccccc--eeeeeeccccCCCccceeeeeeeeeeeecCCCEEEEEeCCCCeE
Confidence            34567788876  778787677788999998865  322222234566789999999998888877888888887654  


Q ss_pred             --cc----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          90 --FI----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        90 --~~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                        +.    .....+++++++..+++-..+.      +|+.++..
T Consensus       216 ~~~~~~~~~~P~~i~~d~~g~l~vad~~~~------rI~~i~~~  253 (260)
T d1rwia_         216 TVLPFTGLNTPLAVAVDSDRTVYVADRGND------RVVKLTSL  253 (260)
T ss_dssp             EECCCCSCCCEEEEEECTTCCEEEEEGGGT------EEEEECCC
T ss_pred             EEEccCCCCCeEEEEEeCCCCEEEEECCCC------EEEEEeCC
Confidence              21    5578899999998766544433      67766654

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=97.86  E-value=0.00094  Score=46.15  Aligned_cols=112  Identities=7%  Similarity=-0.001  Sum_probs=71.5

Q ss_pred             EEEEEeCCCCccEEEEEec-CCeEEEEeCCCCC-CCceEEec--CCCCCEEEEEEccCCCEEEEEe-CCCcEEEEECCcc
Q psy7062          15 ISTVFDSKHLVEMVAALGG-YQHIRMYDFGSNN-PNPVINCE--GVSKNVVEVGFQEDGKWMFTGG-EDCRARIWDLSLC   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~-d~~v~~~d~~~~~-~~~~~~~~--~~~~~i~~~~~sp~~~~l~~~~-~~~~i~l~d~~~~   89 (148)
                      ..++|+|+  |++++++.. ...|.+|+..... ........  ........+.|+|+++++.... .+++|.+|++...
T Consensus       148 h~v~~sPd--G~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~  225 (365)
T d1jofa_         148 HGMVFDPT--ETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPA  225 (365)
T ss_dssp             EEEEECTT--SSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred             eEEEECCC--CCEEEEeeCCCCEEEEEEccCCCceeeccceeecCCCCceEEEEECCCCceEEEeccCCCEEEEEEecCC
Confidence            57889998  777666543 4578888876431 01112222  2356788999999999875554 5789999998654


Q ss_pred             ----c-c----------------------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062          90 ----F-I----------------------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        90 ----~-~----------------------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                          . .                      .....+.++|+|++|+++.+.........|..|++..
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~  291 (365)
T d1jofa_         226 THMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRD  291 (365)
T ss_dssp             TCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECT
T ss_pred             CceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecC
Confidence                0 0                      1245688999999998886532111223466666543

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=97.85  E-value=0.00033  Score=48.52  Aligned_cols=110  Identities=15%  Similarity=0.129  Sum_probs=71.7

Q ss_pred             CcEEEEEeCCCCccEEEEEe-cCCeEEEEeCCCCCCCceEEec-----------------CCCCCEEEEEEccCCCEEEE
Q psy7062          13 GQISTVFDSKHLVEMVAALG-GYQHIRMYDFGSNNPNPVINCE-----------------GVSKNVVEVGFQEDGKWMFT   74 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~-~d~~v~~~d~~~~~~~~~~~~~-----------------~~~~~i~~~~~sp~~~~l~~   74 (148)
                      ++..++|+++  ++++.+.. .+++|.+|+++......+....                 .+......+.++|||+++++
T Consensus       194 gPr~i~f~pd--g~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyv  271 (365)
T d1jofa_         194 HPRWVAMHPT--GNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFA  271 (365)
T ss_dssp             CEEEEEECTT--SSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEE
T ss_pred             ceEEEEECCC--CceEEEeccCCCEEEEEEecCCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEE
Confidence            5678899998  66665534 5678999999876322222111                 11123567899999999877


Q ss_pred             EeCC------CcEEEEECCcc--------cc------ccceEEEEcc-CCCEEEEEecCCceecCeeEEEeecCCC
Q psy7062          75 GGED------CRARIWDLSLC--------FI------QQVNALRITP-DKQLLASAEELSCCYCGAAVFVYNSCYP  129 (148)
Q Consensus        75 ~~~~------~~i~l~d~~~~--------~~------~~i~~~~~sp-~~~~l~~~~~d~~~~~~~~i~~~d~~~~  129 (148)
                      +...      ..+..|++...        +.      ...++++++| +|++|++++.+     .+.|.+|++...
T Consensus       272 snr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~G~~l~va~~~-----s~~v~v~~~~~~  342 (365)
T d1jofa_         272 SSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQ-----EGWLEIYRWKDE  342 (365)
T ss_dssp             EEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSS-----SCEEEEEEEETT
T ss_pred             EcccCCCccceEEEEEEecCCCceeeEeEeeEEEcCCCCccEEEecCCCCCEEEEEeCC-----CCeEEEEEEeCC
Confidence            6431      23667776532        11      4567899998 89988888653     337999987644

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=97.71  E-value=0.0025  Score=43.07  Aligned_cols=109  Identities=6%  Similarity=-0.125  Sum_probs=71.1

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeC----CCcEEEEECCcc-
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE----DCRARIWDLSLC-   89 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~----~~~i~l~d~~~~-   89 (148)
                      +.++||++  |++.++-...+.|..|+.++.  .....+........+++++++|+++++...    .+.+...+.... 
T Consensus        43 EG~~~D~~--G~Ly~~D~~~g~I~ri~p~g~--~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~~  118 (319)
T d2dg1a1          43 EGLNFDRQ--GQLFLLDVFEGNIFKINPETK--EIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDN  118 (319)
T ss_dssp             EEEEECTT--SCEEEEETTTCEEEEECTTTC--CEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCS
T ss_pred             EeCEECCC--CCEEEEECCCCEEEEEECCCC--eEEEEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCCce
Confidence            68899987  778777567788999998876  444544445667899999999998776543    233455555443 


Q ss_pred             c----c-----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          90 F----I-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        90 ~----~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                      +    .     .....+.+.++|++.++............+..++..
T Consensus       119 ~~~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~d  165 (319)
T d2dg1a1         119 LQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPD  165 (319)
T ss_dssp             CEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTT
T ss_pred             eeeeccCCCcccCCcceeEEeccceeecccccccccCcceeEEEecc
Confidence            1    1     456778999999976664432222223345555543

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=97.60  E-value=0.0019  Score=41.90  Aligned_cols=107  Identities=7%  Similarity=0.046  Sum_probs=66.3

Q ss_pred             EEeCCCCccEEEEEecCC--eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCC---cEEEEECCcc---
Q psy7062          18 VFDSKHLVEMVAALGGYQ--HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDC---RARIWDLSLC---   89 (148)
Q Consensus        18 ~~~~~~~~~~l~~~~~d~--~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~---~i~l~d~~~~---   89 (148)
                      .+.+.. ...+++...++  .+.+.+....   ................|+|+++.++..+.++   .+.+.|....   
T Consensus       133 ~~~~~~-~~~~~~~~~~g~~~i~~~~~~~~---~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~~~  208 (269)
T d2hqsa1         133 TWFPDS-QNLAFTSDQAGRPQVYKVNINGG---APQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ  208 (269)
T ss_dssp             EECTTS-SEEEEEECTTSSCEEEEEETTSS---CCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE
T ss_pred             cccccc-ccceecccccCCceEeeeecccc---cceeeecccccccccccccccceeEEEeecCCceeeeEeecccccce
Confidence            344443 23333334444  4666666665   3334444566677889999999887766543   3555565554   


Q ss_pred             -cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCcc
Q psy7062          90 -FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPAA  131 (148)
Q Consensus        90 -~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~~  131 (148)
                       +.  .......|+|||+.|+..+..+   ....++++++.....
T Consensus       209 ~~~~~~~~~~p~~SPDG~~i~f~s~~~---~~~~l~~~~~dg~~~  250 (269)
T d2hqsa1         209 VLSSTFLDETPSLAPNGTMVIYSSSQG---MGSVLNLVSTDGRFK  250 (269)
T ss_dssp             ECCCSSSCEEEEECTTSSEEEEEEEET---TEEEEEEEETTSCCE
T ss_pred             EeecCccccceEECCCCCEEEEEEcCC---CCcEEEEEECCCCCE
Confidence             11  5566789999999887766533   345788999875543

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=97.60  E-value=0.00057  Score=48.74  Aligned_cols=109  Identities=10%  Similarity=0.014  Sum_probs=71.8

Q ss_pred             cCcEEEEEeCCCCccEEEEEecCC-----------------eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEE
Q psy7062          12 FGQISTVFDSKHLVEMVAALGGYQ-----------------HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFT   74 (148)
Q Consensus        12 ~~~~~~~~~~~~~~~~l~~~~~d~-----------------~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~   74 (148)
                      .++..++|+++....+++..+++.                 .+..+|..+.  +...++.. ......+.++|+|+++++
T Consensus       116 ~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~--~v~~qI~v-~~~p~~v~~spdGk~a~v  192 (441)
T d1qnia2         116 QAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETM--DVAWQVIV-DGNLDNTDADYTGKYATS  192 (441)
T ss_dssp             CCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTC--SEEEEEEE-SSCCCCEEECSSSSEEEE
T ss_pred             CCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCccc--eeeEEEec-CCCccceEECCCCCEEEE
Confidence            357788999886555666544432                 2345788877  66666653 345678899999999887


Q ss_pred             EeCCC-----------------------------------------cEEEEECCcc-----cc--ccceEEEEccCCCEE
Q psy7062          75 GGEDC-----------------------------------------RARIWDLSLC-----FI--QQVNALRITPDKQLL  106 (148)
Q Consensus        75 ~~~~~-----------------------------------------~i~l~d~~~~-----~~--~~i~~~~~sp~~~~l  106 (148)
                      .+.+.                                         .+.+++....     +.  .....+.++|||+++
T Consensus       193 t~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~dGk~~~v~~~~v~vvd~~~~~~v~~~IPvgksPhGv~vSPDGkyl  272 (441)
T d1qnia2         193 TCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGDSKVPVVDGRGESEFTRYIPVPKNPHGLNTSPDGKYF  272 (441)
T ss_dssp             EESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSSSCSSEEEECCBSSCCCEEECTTSCEE
T ss_pred             EecCCCceEEEeccCcceEEEEEeCCccceEEEecCCCEEEeCCCCcEEEEcccCCceEEEEeCCCCccCceECCCCCEE
Confidence            76432                                         2233333222     11  557889999999988


Q ss_pred             EEEecCCceecCeeEEEeecCC
Q psy7062         107 ASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus       107 ~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                      ++++..     ..+|.+||+.+
T Consensus       273 ~~~~~~-----~~tvsv~d~~k  289 (441)
T d1qnia2         273 IANGKL-----SPTVSVIAIDK  289 (441)
T ss_dssp             EEECTT-----SSBEEEEEGGG
T ss_pred             EEeCCc-----CCcEEEEEeeh
Confidence            776542     33899999764

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.58  E-value=7e-05  Score=53.85  Aligned_cols=101  Identities=12%  Similarity=0.104  Sum_probs=69.3

Q ss_pred             EEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCC---CCCEEEEEEccCCCEEEEEe---------CCCcEEEEE
Q psy7062          18 VFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGV---SKNVVEVGFQEDGKWMFTGG---------EDCRARIWD   85 (148)
Q Consensus        18 ~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~---~~~i~~~~~sp~~~~l~~~~---------~~~~i~l~d   85 (148)
                      .|.++  +.++.. ..++.+.+||++++  +....+...   .-.+....+|||+++++...         ..+...++|
T Consensus        23 ~W~~~--~~~~~~-~~~g~i~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d   97 (465)
T d1xfda1          23 KWISD--TEFIYR-EQKGTVRLWNVETN--TSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSK   97 (465)
T ss_dssp             CBSSS--SCBCCC-CSSSCEEEBCGGGC--CCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEE
T ss_pred             EEeCC--CcEEEE-eCCCcEEEEECCCC--CEEEEEcCccccccccceeEECCCCCeEEEEEcccceeEeeccccEEEEE
Confidence            45554  566665 67889999999988  333323221   23566778999999887653         346789999


Q ss_pred             CCcc----cc------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          86 LSLC----FI------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        86 ~~~~----~~------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                      +.++    +.      ..+....|||||+.++-... +      .|.+.+.....
T Consensus        98 ~~~~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~~-~------nl~~~~~~~~~  145 (465)
T d1xfda1          98 IPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-N------NIYYCAHVGKQ  145 (465)
T ss_dssp             SSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-T------EEEEESSSSSC
T ss_pred             ccCCceeeccCccCCccccceeeeccCCceEEEEec-c------eEEEEecCCCc
Confidence            9877    21      45667899999999887763 2      47777765443

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=97.50  E-value=0.0045  Score=41.78  Aligned_cols=109  Identities=11%  Similarity=0.139  Sum_probs=72.6

Q ss_pred             cEEEEEeCCCCc---cEEEEEecCCeEEEEeCCCCCCCceE------EecC-CCCCEEEEEEccCCCEEEEEeCCCcEEE
Q psy7062          14 QISTVFDSKHLV---EMVAALGGYQHIRMYDFGSNNPNPVI------NCEG-VSKNVVEVGFQEDGKWMFTGGEDCRARI   83 (148)
Q Consensus        14 ~~~~~~~~~~~~---~~l~~~~~d~~v~~~d~~~~~~~~~~------~~~~-~~~~i~~~~~sp~~~~l~~~~~~~~i~l   83 (148)
                      ++.++|+++.++   .++++-+..+.|..||+...  ..+.      .+.+ .....-++++..+|+..++....+.|..
T Consensus       174 pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~--g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~  251 (314)
T d1pjxa_         174 PNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGP--AKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEV  251 (314)
T ss_dssp             EEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEET--TEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEE
T ss_pred             eeeeEECCCCCcceeEEEEEeecccceEEeeccCc--cccceeeEEEEccccccccceeeEEecCCcEEEEEcCCCEEEE
Confidence            457788776332   24455456678888887643  2221      2222 2234668999999998888777889999


Q ss_pred             EECCcc-----cc---ccceEEEEccCCCEEEEE-ecCCceecCeeEEEeecCCCc
Q psy7062          84 WDLSLC-----FI---QQVNALRITPDKQLLASA-EELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        84 ~d~~~~-----~~---~~i~~~~~sp~~~~l~~~-~~d~~~~~~~~i~~~d~~~~~  130 (148)
                      ||...+     +.   ....+++|.|+++.|..+ +.++      +|...+...+.
T Consensus       252 ~dp~~g~~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g------~i~~~~~~~~G  301 (314)
T d1pjxa_         252 FGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENN------AVWKFEWQRNG  301 (314)
T ss_dssp             ECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTT------EEEEEECSSCB
T ss_pred             EeCCCCEEEEEEECCCCCEEEEEEeCCCCEEEEEECCCC------cEEEEECCCCC
Confidence            998765     22   567889999998755444 4444      78888876554

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=97.48  E-value=0.00016  Score=51.62  Aligned_cols=93  Identities=11%  Similarity=-0.020  Sum_probs=66.9

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEE-EEEeCCCcEEEEECCcc---cc---------
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWM-FTGGEDCRARIWDLSLC---FI---------   91 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l-~~~~~~~~i~l~d~~~~---~~---------   91 (148)
                      |+++.. +.++.+.+++....  +.+..+..... .-++.++|||+++ +++..++++.+||+.+.   +.         
T Consensus       229 Gk~~~v-~~~~v~vvd~~~~~--~v~~~IPvgks-PhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~  304 (441)
T d1qnia2         229 GNFKTI-GDSKVPVVDGRGES--EFTRYIPVPKN-PHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTI  304 (441)
T ss_dssp             TCCBCC-TTCCCCEEECSSSC--SSEEEECCBSS-CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGE
T ss_pred             CCEEEe-CCCCcEEEEcccCC--ceEEEEeCCCC-ccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCCcceEE
Confidence            444444 44667777776665  67777775443 5678999999977 55677899999999765   11         


Q ss_pred             -------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          92 -------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        92 -------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                             -.....+|+++|..+.+.+-|.      +|..|++.
T Consensus       305 ~~~~~~glgplh~~fd~~g~~yts~~~ds------~v~kw~~~  341 (441)
T d1qnia2         305 VAEPELGLGPLHTTFDGRGNAYTTLFIDS------QVCKWNIA  341 (441)
T ss_dssp             EECCBCCSCEEEEEECSSSEEEEEETTTT------EEEEEEHH
T ss_pred             EeecccccCcccceecCCceEEEcccccc------eEEEeccc
Confidence                   2234568999998888887776      89999964

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.42  E-value=0.0045  Score=40.41  Aligned_cols=105  Identities=10%  Similarity=0.020  Sum_probs=71.5

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---   89 (148)
                      .+..++++++  ++++++-.....+..++....  ........-.....+++++|+++.+++...++.+..+|....   
T Consensus        99 ~p~~iavd~~--g~i~v~d~~~~~~~~~~~~~~--~~~~~~~~~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~~~~  174 (260)
T d1rwia_          99 YPEGLAVDTQ--GAVYVADRGNNRVVKLAAGSK--TQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQV  174 (260)
T ss_dssp             SEEEEEECTT--CCEEEEEGGGTEEEEECTTCS--SCEECCCCSCCSCCEEEECTTCCEEEEEGGGTEEEEECTTTCCEE
T ss_pred             eccccccccc--ceeEeeccccccccccccccc--eeeeeeecccCCcceeeecCCCCEeeeccccccccccccccceee
Confidence            3567777876  677777555566777777654  222211122344578899999998888888889999998765   


Q ss_pred             -cc----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          90 -FI----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        90 -~~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                       +.    .....+++.++++++++-...+      +|..++..
T Consensus       175 ~~~~~~~~~p~gi~~d~~g~l~vsd~~~~------~i~~~~~~  211 (260)
T d1rwia_         175 VLPFTDITAPWGIAVDEAGTVYVTEHNTN------QVVKLLAG  211 (260)
T ss_dssp             ECCCSSCCSEEEEEECTTCCEEEEETTTT------EEEEECTT
T ss_pred             eeeccccCCCccceeeeeeeeeeeecCCC------EEEEEeCC
Confidence             21    5568899999998777666544      67777654

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=97.23  E-value=0.0013  Score=44.05  Aligned_cols=63  Identities=16%  Similarity=0.110  Sum_probs=49.2

Q ss_pred             eEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc---cc---ccceEEEEccCCCEEEEEecCC
Q psy7062          50 VINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC---FI---QQVNALRITPDKQLLASAEELS  113 (148)
Q Consensus        50 ~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~---~~---~~i~~~~~sp~~~~l~~~~~d~  113 (148)
                      +..+. ....+..++++|||+++++...+++|+.+|....   +.   ..+.+++|+|+|+.+++...++
T Consensus        21 ~~~~p-~~~~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g~~~~~~~~~~~~~gla~~~dG~l~v~~~~~~   89 (302)
T d2p4oa1          21 ITSFP-VNTFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHATVEGKVSGLAFTSNGDLVATGWNAD   89 (302)
T ss_dssp             EEEEC-TTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEECSSEEEEEEECTTSCEEEEEECTT
T ss_pred             EEECC-CCCCcCCEEECCCCCEEEEeCCCCEEEEEeCCCCEEEEEcCCCCcceEEEcCCCCeEEEecCCc
Confidence            44444 2346889999999999999888999998886554   22   7789999999999888776655

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=97.19  E-value=0.0033  Score=42.42  Aligned_cols=72  Identities=15%  Similarity=0.177  Sum_probs=55.9

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEE-EEEeCCCcEEEEECCcc
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWM-FTGGEDCRARIWDLSLC   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l-~~~~~~~~i~l~d~~~~   89 (148)
                      +..+++|.+  |++.++....+.|.+||.+.+  +.+..+.......++++|.|+++.| ++.+.++.|..+++...
T Consensus       228 pdGiavD~~--GnlyVa~~~~g~I~~~dp~~g--~~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~~~  300 (314)
T d1pjxa_         228 ADGMDFDED--NNLLVANWGSSHIEVFGPDGG--QPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN  300 (314)
T ss_dssp             EEEEEEBTT--CCEEEEEETTTEEEEECTTCB--SCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred             ceeeEEecC--CcEEEEEcCCCEEEEEeCCCC--EEEEEEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEEECCCC
Confidence            346777877  788887677889999999887  6666666566788999999999854 66667788998888654

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.14  E-value=0.013  Score=38.42  Aligned_cols=103  Identities=7%  Similarity=0.078  Sum_probs=71.6

Q ss_pred             cEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEe--cCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc--
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINC--EGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC--   89 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~--~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~--   89 (148)
                      +...+.+++  +.++++....+.+.+++...   +.+..+  ..+......+++.++++.+++....+.|++||....  
T Consensus       116 p~~~avd~~--G~i~v~~~~~~~~~~~~~~g---~~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~~~~V~~~d~~G~~~  190 (279)
T d1q7fa_         116 PRGVTVDNK--GRIIVVECKVMRVIIFDQNG---NVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYL  190 (279)
T ss_dssp             EEEEEECTT--SCEEEEETTTTEEEEECTTS---CEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCEE
T ss_pred             cceeccccC--CcEEEEeeccceeeEeccCC---ceeecccccccccccceeeeccceeEEeeeccccceeeeecCCcee
Confidence            456666665  67777755666788877654   355554  335567889999999998888888899999998655  


Q ss_pred             --cc-----ccceEEEEccCCCEEEEEecCCceecCeeEEEeec
Q psy7062          90 --FI-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNS  126 (148)
Q Consensus        90 --~~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~  126 (148)
                        +.     .....+++.++|+.+++-..+     ..+|.+++.
T Consensus       191 ~~~g~~g~~~~P~giavD~~G~i~Vad~~~-----~~~v~~f~~  229 (279)
T d1q7fa_         191 RQIGGEGITNYPIGVGINSNGEILIADNHN-----NFNLTIFTQ  229 (279)
T ss_dssp             EEESCTTTSCSEEEEEECTTCCEEEEECSS-----SCEEEEECT
T ss_pred             eeecccccccCCcccccccCCeEEEEECCC-----CcEEEEECC
Confidence              21     457889999999866653321     225777763

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.10  E-value=0.0011  Score=47.33  Aligned_cols=96  Identities=13%  Similarity=-0.023  Sum_probs=60.9

Q ss_pred             cEEEEEeCCCCccEEEEEec---------CCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEE
Q psy7062          14 QISTVFDSKHLVEMVAALGG---------YQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIW   84 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~---------d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~   84 (148)
                      .....++|+  ++.++...+         .+...++|+.++....+.........+....|||||+.++-.. ++.+.+.
T Consensus        63 ~~~~~~SpD--~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~  139 (465)
T d1xfda1          63 AIRYEISPD--REYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYC  139 (465)
T ss_dssp             CSEEEECTT--SSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEE
T ss_pred             cceeEECCC--CCeEEEEEcccceeEeeccccEEEEEccCCceeeccCccCCccccceeeeccCCceEEEEe-cceEEEE
Confidence            345667777  666665432         3578899999873222322223344556678999999887765 5567777


Q ss_pred             ECCcc----cc----------------------ccceEEEEccCCCEEEEEecC
Q psy7062          85 DLSLC----FI----------------------QQVNALRITPDKQLLASAEEL  112 (148)
Q Consensus        85 d~~~~----~~----------------------~~i~~~~~sp~~~~l~~~~~d  112 (148)
                      +....    +.                      ..-..+-|||||+.|+....|
T Consensus       140 ~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~~D  193 (465)
T d1xfda1         140 AHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAIN  193 (465)
T ss_dssp             SSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEE
T ss_pred             ecCCCceEEEecccCcceeeccccchhhhhhhccccceEEECCCCCeEEEEEec
Confidence            76544    11                      112467799999999987643

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=96.99  E-value=0.017  Score=37.09  Aligned_cols=73  Identities=18%  Similarity=0.169  Sum_probs=51.9

Q ss_pred             eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCC---cEEEEECCcc----cc---ccceEEEEccCCCE
Q psy7062          36 HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDC---RARIWDLSLC----FI---QQVNALRITPDKQL  105 (148)
Q Consensus        36 ~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~---~i~l~d~~~~----~~---~~i~~~~~sp~~~~  105 (148)
                      .|.+.|.+..  ... .+..+...+...+|||||+.|+......   .+.+.+....    +.   .......|+|+|+.
T Consensus        20 ~l~i~d~dG~--~~~-~l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~   96 (269)
T d2hqsa1          20 ELRVSDYDGY--NQF-VVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSK   96 (269)
T ss_dssp             EEEEEETTSC--SCE-EEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSE
T ss_pred             EEEEEcCCCC--CcE-EEecCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCceeEEeeeecccccceecCCCCe
Confidence            5778888866  333 3333566788899999999997765443   4666677665    21   67788899999998


Q ss_pred             EEEEec
Q psy7062         106 LASAEE  111 (148)
Q Consensus       106 l~~~~~  111 (148)
                      ++....
T Consensus        97 i~~~~~  102 (269)
T d2hqsa1          97 LAFALS  102 (269)
T ss_dssp             EEEEEC
T ss_pred             eeEeee
Confidence            887664

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=96.98  E-value=0.014  Score=39.63  Aligned_cols=106  Identities=11%  Similarity=0.057  Sum_probs=71.3

Q ss_pred             ccEEEEEecCC-----------eEEEEeCCCCCCCceEEec-CCCCCEEEEEEccCCCEEEEEeCC-CcEEEEECCcc--
Q psy7062          25 VEMVAALGGYQ-----------HIRMYDFGSNNPNPVINCE-GVSKNVVEVGFQEDGKWMFTGGED-CRARIWDLSLC--   89 (148)
Q Consensus        25 ~~~l~~~~~d~-----------~v~~~d~~~~~~~~~~~~~-~~~~~i~~~~~sp~~~~l~~~~~~-~~i~l~d~~~~--   89 (148)
                      +++++.|+.+.           .+.+||..+.....+.... .+.....+..+.++|+.++.|+.+ ..+.+||..+.  
T Consensus        31 gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~~~yd~~~~~w  110 (387)
T d1k3ia3          31 GRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSW  110 (387)
T ss_dssp             TEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEE
T ss_pred             CEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCcceeEecCccCcc
Confidence            78888877421           3779999987333333332 233333456788999999988765 58999999877  


Q ss_pred             -----cc--ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          90 -----FI--QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        90 -----~~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                           ..  ..-...+..+|++.++.++.+........+.+||..+.+
T Consensus       111 ~~~~~~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~  158 (387)
T d1k3ia3         111 IPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT  158 (387)
T ss_dssp             EECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred             cccccccccccccceeeecCCceeeeccccccccccceeeeecCCCCc
Confidence                 11  334566777899999888765543344568899987654

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=96.64  E-value=0.043  Score=36.70  Aligned_cols=112  Identities=5%  Similarity=-0.024  Sum_probs=74.0

Q ss_pred             CcEEEEEeCCCCcc-EEEEEecCCeEEEEeCCCCCCCceEE-------ecCCCCCEEEEEEccCCCEEEEEeCCCcEEEE
Q psy7062          13 GQISTVFDSKHLVE-MVAALGGYQHIRMYDFGSNNPNPVIN-------CEGVSKNVVEVGFQEDGKWMFTGGEDCRARIW   84 (148)
Q Consensus        13 ~~~~~~~~~~~~~~-~l~~~~~d~~v~~~d~~~~~~~~~~~-------~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~   84 (148)
                      .++.++|+++  ++ +.++-+..+.|..|+++... .....       ........-.+++.++|++.++....+.|..|
T Consensus       178 ~pnGia~s~d--g~~lyvad~~~~~I~~~d~~~~g-~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~  254 (319)
T d2dg1a1         178 VANGIALSTD--EKVLWVTETTANRLHRIALEDDG-VTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVF  254 (319)
T ss_dssp             SEEEEEECTT--SSEEEEEEGGGTEEEEEEECTTS-SSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEE
T ss_pred             eeeeeeeccc--cceEEEecccCCceEEEEEcCCC-ceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEE
Confidence            4577899998  54 44554667899999986431 11111       11112346789999999988888888999999


Q ss_pred             ECCcc----c--c-------ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          85 DLSLC----F--I-------QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        85 d~~~~----~--~-------~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                      |-.-.    +  .       ..+.+++|.|+...++....+........|+..+..
T Consensus       255 ~p~G~~l~~i~~P~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~g~l~~~~~~  310 (319)
T d2dg1a1         255 NKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGF  310 (319)
T ss_dssp             CTTSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEECS
T ss_pred             CCCCcEEEEEeCCCcCCCcCceeeeEEEeCCCCEEEEEcCCCCcCCceeEEEEeCC
Confidence            96533    1  1       256799999988877776655433444556666553

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=96.63  E-value=0.0039  Score=40.33  Aligned_cols=66  Identities=18%  Similarity=0.135  Sum_probs=44.5

Q ss_pred             EEccC--CCEEEEEeCCCcEEEEECCcc----cc---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCCCc
Q psy7062          64 GFQED--GKWMFTGGEDCRARIWDLSLC----FI---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCYPA  130 (148)
Q Consensus        64 ~~sp~--~~~l~~~~~~~~i~l~d~~~~----~~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~~~  130 (148)
                      .++||  |+.++-.+ ++.|++.|+..+    +.   ......+|||||+.|+.....+.-.....|.+++.....
T Consensus         5 ~~sPdi~G~~v~f~~-~~dl~~~d~~~g~~~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~   79 (281)
T d1k32a2           5 LLNPDIHGDRIIFVC-CDDLWEHDLKSGSTRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGE   79 (281)
T ss_dssp             CEEEEEETTEEEEEE-TTEEEEEETTTCCEEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTE
T ss_pred             ccCCCCCCCEEEEEe-CCcEEEEECCCCCEEEEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCc
Confidence            45788  98877654 456888899877    33   567788999999998876532211112357777766544

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=96.21  E-value=0.11  Score=36.63  Aligned_cols=107  Identities=18%  Similarity=0.134  Sum_probs=70.5

Q ss_pred             cEEEEEeCCCCccEEEEEecCC------------------eEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEE
Q psy7062          14 QISTVFDSKHLVEMVAALGGYQ------------------HIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTG   75 (148)
Q Consensus        14 ~~~~~~~~~~~~~~l~~~~~d~------------------~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~   75 (148)
                      ...+..+...+..+++..+++.                  .+...|.++.  +...++. -......++++|+|+++++.
T Consensus       134 ~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~~~~t~ID~~tm--~V~~QV~-V~g~ld~~~~s~dGK~af~T  210 (459)
T d1fwxa2         134 IHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKW--EVAWQVL-VSGNLDNCDADYEGKWAFST  210 (459)
T ss_dssp             EEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EEEEEEEEETTTT--EEEEEEE-ESSCCCCEEECSSSSEEEEE
T ss_pred             CceeecccCCCeEEEEccCccccccCCCCccccchhhcceEEEEEecCCc--eEEEEee-eCCChhccccCCCCCEEEEE
Confidence            3445555555577777756533                  2567788887  5555554 23456678999999999887


Q ss_pred             eCC--------------------------------------CcEEEEECCcc--------cc--ccceEEEEccCCCEEE
Q psy7062          76 GED--------------------------------------CRARIWDLSLC--------FI--QQVNALRITPDKQLLA  107 (148)
Q Consensus        76 ~~~--------------------------------------~~i~l~d~~~~--------~~--~~i~~~~~sp~~~~l~  107 (148)
                      +.+                                      +.+.+-|.+..        +.  .....+..+|||++++
T Consensus       211 syNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk~~eingV~VVD~~~~~~~~v~~yIPVpKsPHGV~vSPDGKyi~  290 (459)
T d1fwxa2         211 SYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLC  290 (459)
T ss_dssp             ESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGG--CSSEEEEEEESSCCCEEECTTSSEEE
T ss_pred             eccccCCcchhhcccccceEEEEechHHhHHhhhcCCcEEeCCceeecccccCCcceeEEEecCCCCCceEECCCCCEEE
Confidence            643                                      12334444332        11  6678899999999999


Q ss_pred             EEecCCceecCeeEEEeecCC
Q psy7062         108 SAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus       108 ~~~~d~~~~~~~~i~~~d~~~  128 (148)
                      +++..     ..++.++|++.
T Consensus       291 VaGKL-----s~tVSViD~~K  306 (459)
T d1fwxa2         291 VAGKL-----SPTVTVLDVTR  306 (459)
T ss_dssp             EECTT-----SSBEEEEEGGG
T ss_pred             EeCCc-----CCcEEEEEehh
Confidence            88862     34799999863

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=95.75  E-value=0.14  Score=33.82  Aligned_cols=90  Identities=11%  Similarity=-0.013  Sum_probs=64.9

Q ss_pred             EEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc----c
Q psy7062          15 ISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC----F   90 (148)
Q Consensus        15 ~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~----~   90 (148)
                      +...|++.. +.+..+--..+.|..||.+++  + ...+. ....+.++++.++|.++++. . ..+..+|..++    +
T Consensus        21 Egp~wd~~~-~~l~wvDi~~~~I~r~d~~~g--~-~~~~~-~~~~~~~i~~~~dg~l~va~-~-~gl~~~d~~tg~~~~l   93 (295)
T d2ghsa1          21 EGPTFDPAS-GTAWWFNILERELHELHLASG--R-KTVHA-LPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLTLH   93 (295)
T ss_dssp             EEEEEETTT-TEEEEEEGGGTEEEEEETTTT--E-EEEEE-CSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEEEE
T ss_pred             eCCeEECCC-CEEEEEECCCCEEEEEECCCC--e-EEEEE-CCCCcEEEEEecCCCEEEEE-e-CccEEeecccceeeEE
Confidence            778899864 556666346789999999987  3 34443 35678899999999877654 3 45888998876    1


Q ss_pred             c--------ccceEEEEccCCCEEEEEec
Q psy7062          91 I--------QQVNALRITPDKQLLASAEE  111 (148)
Q Consensus        91 ~--------~~i~~~~~sp~~~~l~~~~~  111 (148)
                      .        .+++.+.+.|+|++.++...
T Consensus        94 ~~~~~~~~~~~~nd~~vd~~G~iw~~~~~  122 (295)
T d2ghsa1          94 AELESDLPGNRSNDGRMHPSGALWIGTMG  122 (295)
T ss_dssp             ECSSTTCTTEEEEEEEECTTSCEEEEEEE
T ss_pred             eeeecCCCcccceeeEECCCCCEEEEecc
Confidence            1        46788889999997776543

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.02  E-value=0.32  Score=33.68  Aligned_cols=104  Identities=13%  Similarity=0.056  Sum_probs=60.9

Q ss_pred             EEeCCCCccEEEEEe-cCC----eEEEEeCCCCCCCceE-EecCCCCCEEEEEEccCCCEEEEEeCC-------------
Q psy7062          18 VFDSKHLVEMVAALG-GYQ----HIRMYDFGSNNPNPVI-NCEGVSKNVVEVGFQEDGKWMFTGGED-------------   78 (148)
Q Consensus        18 ~~~~~~~~~~l~~~~-~d~----~v~~~d~~~~~~~~~~-~~~~~~~~i~~~~~sp~~~~l~~~~~~-------------   78 (148)
                      .++|+  +++++.+- ..|    .++++|+.++  +.+. .+.  ......+.|++|++.++....+             
T Consensus       131 ~~Spd--~~~la~s~d~~G~e~~~l~v~Dl~tg--~~~~~~i~--~~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~~~~~~  204 (430)
T d1qfma1         131 AFSED--GEYFAYGLSASGSDWVTIKFMKVDGA--KELPDVLE--RVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETST  204 (430)
T ss_dssp             EECTT--SSEEEEEEEETTCSCEEEEEEETTTT--EEEEEEEE--EECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCC
T ss_pred             EecCC--CCEEEEEeccccCchheeEEeccCcc--eecccccc--cccccceEEcCCCCEEEEEEeccccCccccccccc
Confidence            34455  67766533 333    6999999998  5543 222  1222568899999977654322             


Q ss_pred             ---CcEEEEECCcc-------cc-----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecCC
Q psy7062          79 ---CRARIWDLSLC-------FI-----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSCY  128 (148)
Q Consensus        79 ---~~i~l~d~~~~-------~~-----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~~  128 (148)
                         ..+..+.+.+.       +.     .....+..++++++++.....+.. ....+.+.|...
T Consensus       205 ~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~~~~~~-~~~~~~~~d~~~  268 (430)
T d1qfma1         205 NLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCD-PVNRLWYCDLQQ  268 (430)
T ss_dssp             CCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSS-SCCEEEEEEGGG
T ss_pred             CCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEEeeccCC-ccEEEEEeeCCC
Confidence               35888888765       22     234456678899987754432211 122455566553

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=91.77  E-value=1  Score=29.30  Aligned_cols=96  Identities=10%  Similarity=0.038  Sum_probs=62.9

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCC----c--eEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEEC
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPN----P--VINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDL   86 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~----~--~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~   86 (148)
                      ..+..+|+++. ..++++-+..+.|..|+++.....    .  ...+.+.....-++++..+|++.++.-..+.|..||-
T Consensus       149 ~~Ng~~~s~d~-~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp  227 (295)
T d2ghsa1         149 IPNSICFSPDG-TTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT  227 (295)
T ss_dssp             SEEEEEECTTS-CEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT
T ss_pred             CcceeeecCCC-ceEEEeecccceeeEeeecccccccccceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEecC
Confidence            35778888873 235555466778988887532111    1  1222334556888999999998777767788999996


Q ss_pred             Ccc----cc---ccceEEEEc-cCCCEEEEE
Q psy7062          87 SLC----FI---QQVNALRIT-PDKQLLASA  109 (148)
Q Consensus        87 ~~~----~~---~~i~~~~~s-p~~~~l~~~  109 (148)
                      ...    +.   ..+.+++|- |+.+.|..+
T Consensus       228 ~G~~~~~i~lP~~~~T~~~FGG~d~~~LyvT  258 (295)
T d2ghsa1         228 DGNHIARYEVPGKQTTCPAFIGPDASRLLVT  258 (295)
T ss_dssp             TCCEEEEEECSCSBEEEEEEESTTSCEEEEE
T ss_pred             CCcEeeEecCCCCceEEEEEeCCCCCEEEEE
Confidence            544    22   568899996 676655544

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.29  E-value=0.79  Score=31.61  Aligned_cols=71  Identities=8%  Similarity=0.020  Sum_probs=46.2

Q ss_pred             CEEEEEEccCCCEEEE-EeCC----CcEEEEECCcc--cc-----ccceEEEEccCCCEEEEEecCCc----------ee
Q psy7062          59 NVVEVGFQEDGKWMFT-GGED----CRARIWDLSLC--FI-----QQVNALRITPDKQLLASAEELSC----------CY  116 (148)
Q Consensus        59 ~i~~~~~sp~~~~l~~-~~~~----~~i~l~d~~~~--~~-----~~i~~~~~sp~~~~l~~~~~d~~----------~~  116 (148)
                      .+.++++||+++.++. -+..    ..++++|+.++  +.     .....+.|++|++.|+-...+..          ..
T Consensus       126 ~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i~~~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~~~~~~~  205 (430)
T d1qfma1         126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTN  205 (430)
T ss_dssp             EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCC
T ss_pred             eecceEecCCCCEEEEEeccccCchheeEEeccCcceecccccccccccceEEcCCCCEEEEEEeccccCcccccccccC
Confidence            4566788999997764 3333    47999999998  22     33467899999998776543320          11


Q ss_pred             cCeeEEEeecCCC
Q psy7062         117 CGAAVFVYNSCYP  129 (148)
Q Consensus       117 ~~~~i~~~d~~~~  129 (148)
                      ...+|..+.+-++
T Consensus       206 ~~~~v~~h~lgt~  218 (430)
T d1qfma1         206 LHQKLYYHVLGTD  218 (430)
T ss_dssp             CCCEEEEEETTSC
T ss_pred             CcceEEEEECCCC
Confidence            2335777766544

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=90.59  E-value=1.9  Score=30.07  Aligned_cols=99  Identities=13%  Similarity=0.175  Sum_probs=58.7

Q ss_pred             ecCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecC------CCCCEEEEEEccC---CCEE-EEEeC---
Q psy7062          11 AFGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEG------VSKNVVEVGFQED---GKWM-FTGGE---   77 (148)
Q Consensus        11 ~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~------~~~~i~~~~~sp~---~~~l-~~~~~---   77 (148)
                      +..+..++|.++  +++|++--..|.|++++.+++....+..+..      -......|+++|+   ..++ ++-+.   
T Consensus        26 L~~P~~la~~pd--g~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pdf~~n~~iYvsyt~~~~  103 (450)
T d1crua_          26 LNKPHALLWGPD--NQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNP  103 (450)
T ss_dssp             CSSEEEEEECTT--SCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECT
T ss_pred             CCCceEEEEeCC--CeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCCCccCCEEEEEEecCCC
Confidence            445788999998  8899883246899999887763223333221      1246788999985   2233 32210   


Q ss_pred             ---C----C--cEEEEECCcc----------cc-------ccceEEEEccCCCEEEEEec
Q psy7062          78 ---D----C--RARIWDLSLC----------FI-------QQVNALRITPDKQLLASAEE  111 (148)
Q Consensus        78 ---~----~--~i~l~d~~~~----------~~-------~~i~~~~~sp~~~~l~~~~~  111 (148)
                         +    .  .+..+.....          +.       +....+.|.||+.+.++.+.
T Consensus       104 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~~~p~~~~H~gg~l~fgpDG~LYvs~Gd  163 (450)
T d1crua_         104 KSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD  163 (450)
T ss_dssp             TC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred             CCcccccccceEEEeeecccccccccceEEEeecccccccccccceeEcCCCCEEEEecC
Confidence               0    1  1323332221          11       55678999999987776654

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=88.18  E-value=0.81  Score=32.15  Aligned_cols=62  Identities=15%  Similarity=0.019  Sum_probs=45.4

Q ss_pred             EEEEEEccCCCEEEEEe-CCCcEEEEECCcc---c--------------c--ccceEEEEccCCCEEEEEecCCceecCe
Q psy7062          60 VVEVGFQEDGKWMFTGG-EDCRARIWDLSLC---F--------------I--QQVNALRITPDKQLLASAEELSCCYCGA  119 (148)
Q Consensus        60 i~~~~~sp~~~~l~~~~-~~~~i~l~d~~~~---~--------------~--~~i~~~~~sp~~~~l~~~~~d~~~~~~~  119 (148)
                      .-++.++|||++++.++ .+.++.++|++..   |              +  -....-+|...|....+-.-|.      
T Consensus       277 PHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~~~~~~~~e~elglgPLht~fd~~g~aytslfids------  350 (459)
T d1fwxa2         277 PHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDS------  350 (459)
T ss_dssp             CCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-GGGGEEECCBCCSCEEEEEECTTSEEEEEETTTT------
T ss_pred             CCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcccCCccccEEeecccCcCccccccCCCceEEEEeeccc------
Confidence            44779999999886655 5789999999765   1              0  4456678877776555555655      


Q ss_pred             eEEEeecC
Q psy7062         120 AVFVYNSC  127 (148)
Q Consensus       120 ~i~~~d~~  127 (148)
                      +|..|++.
T Consensus       351 ~v~kw~~~  358 (459)
T d1fwxa2         351 QVVKWNIE  358 (459)
T ss_dssp             EEEEEEHH
T ss_pred             eEEEEecc
Confidence            89999974

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=87.27  E-value=2.1  Score=28.32  Aligned_cols=70  Identities=17%  Similarity=0.195  Sum_probs=44.1

Q ss_pred             EEEeCCCCccEEEEEecC-CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC------CcEEEEECCcc
Q psy7062          17 TVFDSKHLVEMVAALGGY-QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED------CRARIWDLSLC   89 (148)
Q Consensus        17 ~~~~~~~~~~~l~~~~~d-~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~------~~i~l~d~~~~   89 (148)
                      .++.++  +.+++.|+.+ .++.+||..+........+... ..--..+..+||+.++.++.+      ..+.+||..+.
T Consensus        81 ~~~~~~--g~i~v~Gg~~~~~~~~yd~~~~~w~~~~~~~~~-r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~  157 (387)
T d1k3ia3          81 ISMDGN--GQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVA-RGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSK  157 (387)
T ss_dssp             EEECTT--SCEEEECSSSTTCEEEEEGGGTEEEECCCCSSC-CSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTT
T ss_pred             EEEecC--CcEEEeecCCCcceeEecCccCccccccccccc-ccccceeeecCCceeeeccccccccccceeeeecCCCC
Confidence            344454  7888887655 4899999987621112222211 222345677899988887653      36889999776

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=86.80  E-value=2.4  Score=30.51  Aligned_cols=73  Identities=11%  Similarity=0.016  Sum_probs=42.7

Q ss_pred             CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc--ccceE--EEEccCCC-
Q psy7062          35 QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI--QQVNA--LRITPDKQ-  104 (148)
Q Consensus        35 ~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~--~~i~~--~~~sp~~~-  104 (148)
                      +.+.-+|++++  +.+.+... .....+-.++-.+..++.++.|+.++-+|.+++     +.  ..+..  +.|..+|+ 
T Consensus       444 G~l~AiD~~TG--~~~W~~~~-~~~~~~g~l~TagglVf~G~~dg~l~A~Da~tGe~lW~~~l~~~~~a~P~ty~~dGkq  520 (571)
T d2ad6a1         444 GQIRAFDLTTG--KAKWTKWE-KFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQ  520 (571)
T ss_dssp             EEEEEECTTTC--CEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred             ccEEEeccCCC--ceeeEcCC-CCCCCcceeEecCCEEEEECCCCeEEEEECCCCcEEEEEECCCCceecceEEEECCEE
Confidence            35777787777  55554431 111111112234667778999999999999998     22  22222  55666776 


Q ss_pred             EEEEEe
Q psy7062         105 LLASAE  110 (148)
Q Consensus       105 ~l~~~~  110 (148)
                      ++++..
T Consensus       521 Yi~v~~  526 (571)
T d2ad6a1         521 YIGSMY  526 (571)
T ss_dssp             EEEEEE
T ss_pred             EEEEEe
Confidence            554443

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=85.99  E-value=1.9  Score=31.01  Aligned_cols=73  Identities=18%  Similarity=0.138  Sum_probs=46.3

Q ss_pred             CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc----ccceEEEEccCCC-
Q psy7062          35 QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI----QQVNALRITPDKQ-  104 (148)
Q Consensus        35 ~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~----~~i~~~~~sp~~~-  104 (148)
                      +.+.-+|+.++  +.+.+...+.. ..+-.++-.+..++.++.|+.++-+|.+++     +.    ..-.=+.|..+|+ 
T Consensus       466 G~l~AiD~~TG--~i~W~~~~~~p-~~~g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~G~q  542 (582)
T d1flga_         466 GSLRAMDPVSG--KVVWEHKEHLP-LWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQ  542 (582)
T ss_dssp             EEEEEECTTTC--CEEEEEEESSC-CCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred             CeEEEEcCCCC--cEEeecCCCCC-CccceeEEcCCeEEEeCCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCEE
Confidence            46777888888  66666553222 222123456778888999999999999999     22    1112256667885 


Q ss_pred             EEEEEe
Q psy7062         105 LLASAE  110 (148)
Q Consensus       105 ~l~~~~  110 (148)
                      +++...
T Consensus       543 Yv~i~a  548 (582)
T d1flga_         543 YLGVTV  548 (582)
T ss_dssp             EEEEEE
T ss_pred             EEEEEe
Confidence            454443

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.63  E-value=3  Score=26.59  Aligned_cols=107  Identities=7%  Similarity=-0.081  Sum_probs=66.3

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeC--CCcEEEEECCcc-
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGE--DCRARIWDLSLC-   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~--~~~i~l~d~~~~-   89 (148)
                      .+..+++|+.. +.+..+-...+.|.+.+++..  ...............+++.|...++.....  .+.|.-.++... 
T Consensus        78 ~p~glAvD~~~-~~lY~~d~~~~~I~v~~~~g~--~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~  154 (266)
T d1ijqa1          78 APDGLAVDWIH-SNIYWTDSVLGTVSVADTKGV--KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD  154 (266)
T ss_dssp             CCCEEEEETTT-TEEEEEETTTTEEEEEETTSS--SEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC
T ss_pred             CcceEEEeecc-ceEEEEecCCCEEEeEecCCc--eEEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCc
Confidence            35678888764 445555456678999999876  444444445567889999996665554443  345555555433 


Q ss_pred             ---c-c---ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          90 ---F-I---QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        90 ---~-~---~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                         + .   ..+..+++.+.++.|.-+...     ...|...|+.
T Consensus       155 ~~~l~~~~~~~p~gl~iD~~~~~lYw~d~~-----~~~I~~~~~d  194 (266)
T d1ijqa1         155 IYSLVTENIQWPNGITLDLLSGRLYWVDSK-----LHSISSIDVN  194 (266)
T ss_dssp             EEEEECSSCSCEEEEEEETTTTEEEEEETT-----TTEEEEEETT
T ss_pred             eecccccccceeeEEEeeccccEEEEecCC-----cCEEEEEECC
Confidence               2 1   456788888877666655431     2256666654

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=85.16  E-value=1.3  Score=31.80  Aligned_cols=74  Identities=18%  Similarity=0.111  Sum_probs=46.9

Q ss_pred             CeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-----cc--ccceE--EEEccCCC-
Q psy7062          35 QHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-----FI--QQVNA--LRITPDKQ-  104 (148)
Q Consensus        35 ~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-----~~--~~i~~--~~~sp~~~-  104 (148)
                      +.+.-||+.++  +.+...+... ...+=.++-.+..++.++.|+.++.+|.+++     +.  ..+..  +.|.-+|+ 
T Consensus       457 G~l~AiD~~tG--k~~W~~~~~~-p~~gg~lstagglVF~G~~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~GkQ  533 (573)
T d1kb0a2         457 GRLLAWDPVAQ--KAAWSVEHVS-PWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQ  533 (573)
T ss_dssp             EEEEEEETTTT--EEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred             ccEEEeCCCCC--ceEeeecCCC-CCCCceEEEcCCEEEEECCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCEE
Confidence            46888999998  7776665322 1111123446788888999999999999999     22  22222  45555776 


Q ss_pred             EEEEEec
Q psy7062         105 LLASAEE  111 (148)
Q Consensus       105 ~l~~~~~  111 (148)
                      +++..+.
T Consensus       534 Yv~v~~G  540 (573)
T d1kb0a2         534 YVSVAVG  540 (573)
T ss_dssp             EEEEEEC
T ss_pred             EEEEEeC
Confidence            4444443

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=82.65  E-value=3.3  Score=29.73  Aligned_cols=48  Identities=15%  Similarity=0.180  Sum_probs=34.2

Q ss_pred             ccEEEEEecCCeEEEEeCCCCCCCceEEecCCCC-CEEEEEEccCCC-EEEE
Q psy7062          25 VEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSK-NVVEVGFQEDGK-WMFT   74 (148)
Q Consensus        25 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~-~i~~~~~sp~~~-~l~~   74 (148)
                      +.++.+|+.|+.++.+|.+++  +.+..++.... .-.-+.|..+|+ +++.
T Consensus       497 gglVF~Gt~dg~l~A~Da~TG--e~LW~~~~~~~~~~~P~ty~~~G~qYv~i  546 (582)
T d1flga_         497 GNLVFTGTGDGYFKAFDAKSG--KELWKFQTGSGIVSPPITWEQDGEQYLGV  546 (582)
T ss_dssp             TTEEEEECTTSEEEEEETTTC--CEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred             CCeEEEeCCCCeEEEEECCCC--cEeEEEECCCCccccCEEEEECCEEEEEE
Confidence            567778899999999999999  88888764221 112256778887 4444

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=82.39  E-value=4.3  Score=25.82  Aligned_cols=107  Identities=7%  Similarity=-0.081  Sum_probs=63.9

Q ss_pred             CcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCC-Cc--EEEEECCcc
Q psy7062          13 GQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGED-CR--ARIWDLSLC   89 (148)
Q Consensus        13 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~-~~--i~l~d~~~~   89 (148)
                      .+..+++|... +.+..+-...+.|.+.+++..  .....+...-..+..+++.|...+++..... +.  |.--++...
T Consensus        80 ~p~~iAvD~~~-~~lY~~d~~~~~I~~~~~dg~--~~~~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~  156 (263)
T d1npea_          80 SPEGIALDHLG-RTIFWTDSQLDRIEVAKMDGT--QRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT  156 (263)
T ss_dssp             CEEEEEEETTT-TEEEEEETTTTEEEEEETTSC--SCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC
T ss_pred             cccEEEEeccC-CeEEEeccCCCEEEEEecCCc--eEEEEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCC
Confidence            46788888763 344445455678999999866  3333333334678899999977766554432 23  444455433


Q ss_pred             ----cc----ccceEEEEccCCCEEEEEecCCceecCeeEEEeecC
Q psy7062          90 ----FI----QQVNALRITPDKQLLASAEELSCCYCGAAVFVYNSC  127 (148)
Q Consensus        90 ----~~----~~i~~~~~sp~~~~l~~~~~d~~~~~~~~i~~~d~~  127 (148)
                          +.    .....+++.+.++.|..+...     ...|...|+.
T Consensus       157 ~~~~i~~~~~~~P~glaiD~~~~~lYw~d~~-----~~~I~~~~~~  197 (263)
T d1npea_         157 NRRILAQDNLGLPNGLTFDAFSSQLCWVDAG-----THRAECLNPA  197 (263)
T ss_dssp             CCEEEECTTCSCEEEEEEETTTTEEEEEETT-----TTEEEEEETT
T ss_pred             CceeeeeecccccceEEEeecCcEEEEEeCC-----CCEEEEEECC
Confidence                11    556788888877666555421     2256666654

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=81.51  E-value=6  Score=26.92  Aligned_cols=92  Identities=10%  Similarity=-0.035  Sum_probs=60.3

Q ss_pred             ecCcEEEEEeCCCCccEEEEEecCCeEEEEeCCCCCCCceEEecCCCCCEEEEEEccCCCEEEEEeCCCcEEEEECCcc-
Q psy7062          11 AFGQISTVFDSKHLVEMVAALGGYQHIRMYDFGSNNPNPVINCEGVSKNVVEVGFQEDGKWMFTGGEDCRARIWDLSLC-   89 (148)
Q Consensus        11 ~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~i~l~d~~~~-   89 (148)
                      +.....++|+.+    .|+. ..++.+..++...-  ........-...+..+.++|  ..++....++.+.++++... 
T Consensus        86 ip~v~~vafs~d----~l~v-~~~~~l~~~~~~~l--~~~~~~~~~~~~~~~~~~~p--~~~~l~~~~~~~~~~~l~~~~  156 (381)
T d1xipa_          86 IPDVIFVCFHGD----QVLV-STRNALYSLDLEEL--SEFRTVTSFEKPVFQLKNVN--NTLVILNSVNDLSALDLRTKS  156 (381)
T ss_dssp             CTTEEEEEEETT----EEEE-EESSEEEEEESSST--TCEEEEEECSSCEEEEEECS--SEEEEEETTSEEEEEETTTCC
T ss_pred             CCCeEEEEeeCC----EEEE-EeCCCEEEEEeecc--ccccccccccccccceecCC--ceeEEEecCCCEEEEEeccCc
Confidence            344566777644    3555 45677888888765  33333333345577777666  45566677888888888766 


Q ss_pred             ---c-------c--ccceEEEEccCCCEEEEEec
Q psy7062          90 ---F-------I--QQVNALRITPDKQLLASAEE  111 (148)
Q Consensus        90 ---~-------~--~~i~~~~~sp~~~~l~~~~~  111 (148)
                         +       .  ....+++|++.|.+++++..
T Consensus       157 ~~~~~~~v~~~~~~~~~~~v~ws~kgkq~v~~~g  190 (381)
T d1xipa_         157 TKQLAQNVTSFDVTNSQLAVLLKDRSFQSFAWRN  190 (381)
T ss_dssp             EEEEEESEEEEEECSSEEEEEETTSCEEEEEEET
T ss_pred             cccccCCcceEEecCCceEEEEeCCcEEEEEeCC
Confidence               1       1  66788899999988887753