Psyllid ID: psy7077

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330------
Protein Sequence
MCLLIALHHLIGVPLLSVILTAIAPQTIVTPRLMVHGAPLLLRILQNWAHQRLKITKDHTIKAKEEGDLKDTQSSSDGSQDVFCSVHLQLSTKEKDLEVNNSNLDDLKKTLANMMSDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGTIGDRTARFRGVSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVPGTELPGDKHHLELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVPGTELPGDKHHLE
Secondary Structure (PSIPRED)
ccHHHHHccccccccEEEEEEccccccccccccccccHHHHHHHHHHHcccccccccccEEEEEEEcccccccccccccccccccccEEcccccccccccccccccccHHccccccccEEEEEcccccccccccccccccEEEEEEEEcccccEEcccccccccccccccEEEEEEccccccccccccccccEEEEEEEccccccEEEEEEccEEEEEEcccEEEccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccccccccEEEEEEEccccEEEEEEccEEEEEEcccEEEccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHcccccccEccccccccccccccccccccHHHHHHHccHHHHHHcccHHHHHHHHHccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccEEEEEEEcccccccccccccccEEEEEEcccccccccccccEcccccccccEEEEEEEccccccccccccccccEEEEEEEcccccccEEEEccccEccEccccEEEcccccccccccccccccccccccccccccccccccccEEEEEEccccccccccccccccEEEEEEEcccccEEEEEcccEEEcccccEEEccccccccccccccccccccc
Coil and Loop (DISEMBL)
MCLLIALHHLIGVPLLSVILtaiapqtivtprlmvhGAPLLLRILQNWAHQRLKItkdhtikakeegdlkdtqsssdgsqdvFCSVHLQLSTKEKDLEVNNSNLDDLKKTLANMMSDKyyiaaypydstepgdltfnqDEVIYVTKkendwwtgtigdrtarfrGVSEYRRYRAIYEFVsrngdelsfqpgdiimvpvkqnaepgwlagelrgqtgwfpesyvepcdetgevvpgtelpgdkhHLELIAEVpenisdsggsgiaveegpgipadipspimglgtvvpvkqnaepgwlagelrgqtgwfpesyvepcdetgevvpgtelpgdkhhle
Flexible Loop (DISEMBL)
MCLLIALHHLIGVPLLSVILTAIAPQTIVTPRLMVHGAPLLLRILQNWAHQRLKITkdhtikakeegdlkdtqsssdgsqDVFCSVHLQLstkekdlevnnsNLDDLKKTLANMMSDKYYIAAYPYDSTEPGDLTFNQDEVIYVTkkendwwtgtigdrtarfrgvsEYRRYRAIYEFvsrngdelsfQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVPGTELPGDKHHLELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETgevvpgtelpgdkhhle
Low Complexity Region (SEG)
MCLLIALHHLIGVPLLSVILTAIAPQTIVTPRLMVHGAPLLLRILQNWAHQRLKITKDHTIKAKEEGDLKDTQSSSDGSQDVFCSVHLQLSTKEKDLEVNNSNLDDLKKTLANMMSDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGTIGDRTARFRGVSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVPGTELPGDKHHLELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVPGTELPGDKHHLE
Disordered region (IsUnstruct)
*CLLIALHHLIGVPLLSVILTAIAPQTIVTPRLMVHGAPLLLRILQNWAHQRLKITKD***********************VFCSVHLQ*****************LKKTLANMMSDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGTIGDRTARFRGVSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVP*********HLELIA*************************IPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPC********************
Disordered Region (DISOPRED)
MCLL***HHLIGVPLLS************************L********************************************************************************AY***************EVIYVTKKENDWWTGTIGDRTARFRGVSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE*************************************GIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYV***********************
Disordered Region (DISEMBL)
MCLLIALHHLIGVPLLSVILTAIAPQTIVTPRLMVHGAPLLLRILQNWAHQRLKITKDHTIKAKEE*************QDVFCSVHLQLSTKEKDLEVNNSNLDDLKKTLANMMSDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGTIGDRTARFRGVSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVPGTELPGDKHHLELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVPGTELPGDKHHLE
Disordered Region (DISPRO)
MCLLIALHHLIGVPLLSVILT*IAPQTIVTPRLMVHGAPLLLRILQNWAHQRLKITKDHTIKAK*****KDTQSSSDGSQDVFCSVHLQ**************************SDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGTIGDRTARFRGVSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE******************************GGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE******************
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MCLLIALHHLIGVPLLSVILTAIAPQTIVTPRLMVHGAPLLLRILQNWAHQRLKITKDHTIKAKEEGDLKDTQSSSDGSQDVFCSVHLQLSTKEKDLEVNNSNLDDLKKTLANMMSDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGTIGDRTARFRGVSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVPGTELPGDKHHLELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVPGTELPGDKHHLE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	336	2.2.26 [Sep-21-2011]
Q9Z0R4	1714	Intersectin-1 OS=Mus musc	yes	N/A	0.583	0.114	0.299	1e-19
Q15811	1721	Intersectin-1 OS=Homo sap	yes	N/A	0.601	0.117	0.296	3e-19
Q9NZM3	1697	Intersectin-2 OS=Homo sap	no	N/A	0.511	0.101	0.322	5e-19
Q9WVE9	1217	Intersectin-1 OS=Rattus n	no	N/A	0.526	0.145	0.297	2e-17
Q9Z0R6	1659	Intersectin-2 OS=Mus musc	no	N/A	0.505	0.102	0.310	4e-17
O42287	1270	Intersectin-1 OS=Xenopus	N/A	N/A	0.508	0.134	0.293	1e-16
Q91X43	789	SH3 domain-containing pro	no	N/A	0.261	0.111	0.324	1e-09
Q5HYK7	790	SH3 domain-containing pro	no	N/A	0.383	0.163	0.267	1e-09
Q6TXD4	1580	Dynamin-binding protein O	no	N/A	0.386	0.082	0.341	2e-09
Q6XZF7	1577	Dynamin-binding protein O	no	N/A	0.410	0.087	0.314	2e-08

>sp|Q9Z0R4|ITSN1_MOUSE Intersectin-1 OS=Mus musculus GN=Itsn1 PE=1 SV=2

 Score = 97.8 bits (242), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 106/244 (43%), Gaps = 48/244 (19%)

Query: 120  YIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGTIGDRTARFRGVSEYRRYR------ 173
            +IA Y Y+S+E GDLTF Q +VI VTKK+ DWWTGT+GD++  F   S Y R +      
Sbjct: 1000 FIAMYTYESSEQGDLTFQQGDVIVVTKKDGDWWTGTVGDKSGVF--PSNYVRLKDSEGSG 1057

Query: 174  ----------------AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRG---- 213
                             I  + +   ++L+  PG +I++  K     GW  GEL+     
Sbjct: 1058 TAGKTGSLGKKPEIAQVIASYAATGPEQLTLAPGQLILIRKKNPG--GWWEGELQARGKK 1115

Query: 214  -QTGWFPESYVEPCDETGEVVPGTELPGDKHHLELIAEVPENISDSGGSGIAVEEGPGIP 272
             Q GWFP +YV+        +  TELP         A  P      G      +    + 
Sbjct: 1116 RQIGWFPANYVKLLSPGTSKITPTELPK-------TAVQPAVCQVIGMYDYTAQNDDEL- 1167

Query: 273  ADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVPGTELPGDK 332
                      G ++ V    +P W  GE+ GQ G FP +YV+    T ++ P  +   D 
Sbjct: 1168 ------AFSKGQIINVLNKEDPDWWKGEVSGQVGLFPSNYVK---LTTDMDPSQQWCSDL 1218

Query: 333  HHLE 336
            H L+
Sbjct: 1219 HLLD 1222

Adapter protein that may provide indirect link between the endocytic membrane traffic and the actin assembly machinery. May regulate the formation of clathrin-coated vesicles. Inhibits ARHGAP31 activity toward RAC1.
Mus musculus (taxid: 10090)

>sp|Q15811|ITSN1_HUMAN Intersectin-1 OS=Homo sapiens GN=ITSN1 PE=1 SV=3

 Score = 96.3 bits (238), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 111/250 (44%), Gaps = 48/250 (19%)

Query: 114  MMSDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGTIGDRTARFRGVSEYRRYR 173
            ++S + +IA Y Y+S+E GDLTF Q +VI VTKK+ DWWTGT+GD+   F   S Y R +
Sbjct: 1001 VVSGEEFIAMYTYESSEQGDLTFQQGDVILVTKKDGDWWTGTVGDKAGVF--PSNYVRLK 1058

Query: 174  ----------------------AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL 211
                                   I  + +   ++L+  PG +I++  K     GW  GEL
Sbjct: 1059 DSEGSGTAGKTGSLGKKPEIAQVIASYTATGPEQLTLAPGQLILIRKKNPG--GWWEGEL 1116

Query: 212  RG-----QTGWFPESYVEPCDETGEVVPGTELPGDKHHLELIAEVPENISDSGGSGIAVE 266
            +      Q GWFP +YV+        +  TE P        +A V + I     +    +
Sbjct: 1117 QARGKKRQIGWFPANYVKLLSPGTSKITPTEPPKST----ALAAVCQVIGMYDYTAQNDD 1172

Query: 267  EGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVPGT 326
            E               G ++ V    +P W  GE+ GQ G FP +YV+    T ++ P  
Sbjct: 1173 EL----------AFNKGQIINVLNKEDPDWWKGEVNGQVGLFPSNYVK---LTTDMDPSQ 1219

Query: 327  ELPGDKHHLE 336
            +   D H L+
Sbjct: 1220 QWCSDLHLLD 1229

Adapter protein that may provide indirect link between the endocytic membrane traffic and the actin assembly machinery. May regulate the formation of clathrin-coated vesicles. Isoform 1 could be involved in brain-specific synaptic vesicle recycling. Inhibits ARHGAP31 activity toward RAC1.

Homo sapiens (taxid: 9606)

>sp|Q9NZM3|ITSN2_HUMAN Intersectin-2 OS=Homo sapiens GN=ITSN2 PE=1 SV=3

 Score = 95.5 bits (236), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 103/220 (46%), Gaps = 48/220 (21%)

Query: 120  YIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGTIGDRTARF---------------- 163
            YIA YPY S EPGDLTF + E I VT+K+ +WWTG+IGDR+  F                
Sbjct: 986  YIALYPYSSVEPGDLTFTEGEEILVTQKDGEWWTGSIGDRSGIFPSNYVKPKDQESFGSA 1045

Query: 164  --RGVSEYR--RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRG-----Q 214
               G S  +    +    +V+   ++LS  PG +I++ +K+N   GW  GEL+      Q
Sbjct: 1046 SKSGASNKKPEIAQVTSAYVASGSEQLSLAPGQLILI-LKKNTS-GWWQGELQARGKKRQ 1103

Query: 215  TGWFPESYVEPCDETGEVVPGTELPGDKHHLELIAEVPENISDSGGSGIAVEEGPGIPAD 274
             GWFP S+V+       + P +E      H   + +V           IA+ +      D
Sbjct: 1104 KGWFPASHVKL------LGPSSERATPAFH--PVCQV-----------IAMYDYAANNED 1144

Query: 275  IPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVE 314
              S     G ++ V    +P W  GE+ G TG FP +YV+
Sbjct: 1145 ELS--FSKGQLINVMNKDDPDWWQGEINGVTGLFPSNYVK 1182

Adapter protein that may provide indirect link between the endocytic membrane traffic and the actin assembly machinery. May regulate the formation of clathrin-coated vesicles.

Homo sapiens (taxid: 9606)

>sp|Q9WVE9|ITSN1_RAT Intersectin-1 OS=Rattus norvegicus GN=Itsn1 PE=1 SV=1

 Score = 90.5 bits (223), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 95/222 (42%), Gaps = 45/222 (20%)

Query: 120  YIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGTIGDRTARFRGVSEYRRYR------ 173
            ++A Y Y+S+E GDLTF Q  VI VTKK+ DWWTGT+G+ +  F   S Y R +      
Sbjct: 1004 FVAMYTYESSEHGDLTFQQGHVIVVTKKDGDWWTGTVGETSGVF--PSNYVRLKDSEGSG 1061

Query: 174  ----------------AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRG---- 213
                             I  + +   ++L+  PG +I++  K     GW  GEL+     
Sbjct: 1062 TAGKTGSLEKKPEIAQVIASYTATGPEQLTLAPGQLILIRKKNPG--GWWEGELQARGKK 1119

Query: 214  -QTGWFPESYVEPCDETGEVVPGTELPGDKHHLELIAEVPENISDSGGSGIAVEEGPGIP 272
             Q GWFP +YV+        +  TELP         A  P      G      +    + 
Sbjct: 1120 RQIGWFPANYVKLLSPGTSKITPTELPK-------TAVQPAVCQVIGMYDYTAQNDDEL- 1171

Query: 273  ADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVE 314
                      G ++ V    +P W  GE+ GQ G FP +YV+
Sbjct: 1172 ------AFSKGQIINVLSKEDPDWWKGEVSGQVGLFPSNYVK 1207

Adapter protein that may provide indirect link between the endocytic membrane traffic and the actin assembly machinery. May regulate the formation of clathrin-coated vesicles. Inhibits ARHGAP31 activity toward RAC1.

Rattus norvegicus (taxid: 10116)

>sp|Q9Z0R6|ITSN2_MOUSE Intersectin-2 OS=Mus musculus GN=Itsn2 PE=1 SV=2

 Score = 89.4 bits (220), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 100/222 (45%), Gaps = 52/222 (23%)

Query: 120  YIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGTIGDRTARFRGVSEYRRYRAIYEF- 178
            YIA Y Y S EPGDLTF + E I VT+K+ +WWTG+IG+RT  F   S Y R +    F 
Sbjct: 947  YIALYSYSSVEPGDLTFTEGEEILVTQKDGEWWTGSIGERTGIF--PSNYVRPKDQENFG 1004

Query: 179  -VSRNG--------------------DELSFQPGDIIMVPVKQNAEPGWLAGELRG---- 213
              S++G                    ++LS  PG +I++ +K+N   GW  GEL+     
Sbjct: 1005 NASKSGASNKKPEIAQVTSAYAASGTEQLSLAPGQLILI-LKKNTS-GWWQGELQARGKK 1062

Query: 214  -QTGWFPESYVEPCDETGEVVPGTELPGDKHHLELIAEVPENISDSGGSGIAVEEGPGIP 272
             Q GWFP S+V+    + E      +P      ++IA      ++      +        
Sbjct: 1063 RQKGWFPASHVKLLGPSSERT----MPTFHAVCQVIAMYDYMANNEDELNFSK------- 1111

Query: 273  ADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVE 314
                      G ++ V    +P W  GE  G TG FP +YV+
Sbjct: 1112 ----------GQLINVMNKDDPDWWQGETNGLTGLFPSNYVK 1143

Adapter protein that may provide indirect link between the endocytic membrane traffic and the actin assembly machinery. May regulate the formation of clathrin-coated vesicles.

Mus musculus (taxid: 10090)

>sp|O42287|ITSN1_XENLA Intersectin-1 OS=Xenopus laevis GN=itsn1 PE=1 SV=1

 Score = 87.8 bits (216), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 97/228 (42%), Gaps = 57/228 (25%)

Query: 120  YIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGTIGDRTARFRGVSEYRR-------- 171
            YI+ Y Y+S E GDLTF Q ++I V KK+ DWWTGT+G++T  F   S Y R        
Sbjct: 991  YISMYTYESNEQGDLTFQQGDLIVVIKKDGDWWTGTVGEKTGVF--PSNYVRPKDSEAAG 1048

Query: 172  --------------YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRG---- 213
                           + I  + +   ++L+  PG +I++  K     GW  GEL+     
Sbjct: 1049 SGGKTGSLGKKPEIAQVIASYAATAPEQLTLAPGQLILIRKKNPG--GWWEGELQARGKK 1106

Query: 214  -QTGWFPESYVEPCDE-TGEVVPG-----TELPGDKHHLELIAEVPENISDSGGSGIAVE 266
             Q GWFP +YV+     T +  P      T LP     + +   + +N  +   S     
Sbjct: 1107 RQIGWFPANYVKLLSPGTNKSTPTEPPKPTSLPPTCQVIGMYDYIAQNDDELAFSK---- 1162

Query: 267  EGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVE 314
                            G V+ V    +P W  GEL G  G FP +YV+
Sbjct: 1163 ----------------GQVINVLNKEDPDWWKGELNGHVGLFPSNYVK 1194

Adapter protein that may provide indirect link between the endocytic membrane traffic and the actin assembly machinery. May regulate the formation of clathrin-coated vesicles.

Xenopus laevis (taxid: 8355)

>sp|Q91X43|SH319_MOUSE SH3 domain-containing protein 19 OS=Mus musculus GN=Sh3d19 PE=1 SV=2

 Score = 64.3 bits (155), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 61/111 (54%), Gaps = 23/111 (20%)

Query: 133 DLTFNQ-DEVIYVTKKENDWWTGTIGDRTARF------------RGVSEY----RRYRAI 175
           DL F + D ++ + + ++DW+ G + DR   F            +GV+      R+ +A+
Sbjct: 678 DLPFKRGDRILILERLDSDWYRGRLHDREGIFPAVFVQPCPAEAKGVASAIPKGRKVKAL 737

Query: 176 YEFVSRNGDELSFQPGDII--MVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           Y+F+  N DELSF+ GD+I  + P+       W+ GEL G+ G FP++YV+
Sbjct: 738 YDFLGENEDELSFKAGDVITELEPIDD----AWMRGELMGRAGMFPKNYVQ 784

May play a role in regulating A disintegrin and metalloproteases (ADAMs) in the signaling of EGFR-ligand shedding. May be involved in suppression of Ras-induced cellular transformation and Ras-mediated activation of ELK1. Plays a role in the regulation of cell morphology and cytoskeletal organization.

Mus musculus (taxid: 10090)

>sp|Q5HYK7|SH319_HUMAN SH3 domain-containing protein 19 OS=Homo sapiens GN=SH3D19 PE=1 SV=2

 Score = 63.9 bits (154), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 78/157 (49%), Gaps = 28/157 (17%)

Query: 85  SVHLQLSTKEKDLEVNNSNLDDLKKTLANMMSDKYYIAAYPYDSTEPGDLTFNQDEVIYV 144
           S  + L TK++D   N+           N +  ++  A + + +    DL+F + + I +
Sbjct: 640 STKVPLKTKKEDSGSNSQ---------VNSLPAEWCEALHSFTAETSDDLSFKRGDRIQI 690

Query: 145 TKK-ENDWWTGTIGDRTARFRGV----------------SEYRRYRAIYEFVSRNGDELS 187
            ++ ++DW  G + DR   F  V                 + R+ +A+Y+F   N DELS
Sbjct: 691 LERLDSDWCRGRLQDREGIFPAVFVRPCPAEAKSMLAIVPKGRKAKALYDFRGENEDELS 750

Query: 188 FQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           F+ GDII     ++ +  W++GEL G++G FP++Y++
Sbjct: 751 FKAGDIIT--ELESVDDDWMSGELMGKSGIFPKNYIQ 785

May play a role in regulating A disintegrin and metalloproteases (ADAMs) in the signaling of EGFR-ligand shedding. May be involved in suppression of Ras-induced cellular transformation and Ras-mediated activation of ELK1. Plays a role in the regulation of cell morphology and cytoskeletal organization.

Homo sapiens (taxid: 9606)

>sp|Q6TXD4|DNMBP_MOUSE Dynamin-binding protein OS=Mus musculus GN=Dnmbp PE=1 SV=2

 Score = 63.5 bits (153), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/164 (34%), Positives = 76/164 (46%), Gaps = 34/164 (20%)

Query: 173 RAIYEFVSRNGDELSFQPGD---IIMVPVKQNAEPGWLAGELRGQTGWFPESYVE---PC 226
           RA+    ++  +EL F+ GD   II VP     EPGW  GEL G+ G FPE +VE   P 
Sbjct: 152 RALMGLSAQLDEELDFREGDLITIIGVP-----EPGWFEGELEGRRGIFPEGFVELLGPL 206

Query: 227 DETGEVVPGTELPGDKHHLELIAEVPENISDSGGS---------GIAVE-----EGPGIP 272
               E V      GD   +    +VP   ++SGG          GIA+      E   + 
Sbjct: 207 RTVDESV--NSRSGDDSAVNGEVDVPPEEAESGGDEDDQQSGTYGIALYRFQALETNELD 264

Query: 273 ADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPC 316
            ++   I  LGT+       E GWL G L+G+TG FP  +V+ C
Sbjct: 265 FEVGDRIQILGTL-------EDGWLEGCLKGKTGVFPHRFVKLC 301

Scaffold protein that links dynamin with actin-regulating proteins. May play a role in membrane trafficking between the cell surface and the Golgi.

Mus musculus (taxid: 10090)

>sp|Q6XZF7|DNMBP_HUMAN Dynamin-binding protein OS=Homo sapiens GN=DNMBP PE=1 SV=1

 Score = 60.1 bits (144), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 74/162 (45%), Gaps = 24/162 (14%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIM---VPVKQNAEPGWLAGELRGQTGWFPESYVE---PC 226
           RA+    ++  +EL F+ GD+I    VP     EPGW  GEL G+ G FPE +VE   P 
Sbjct: 151 RALMGLSAQLDEELDFREGDVITIIGVP-----EPGWFEGELEGRRGIFPEGFVELLGPL 205

Query: 227 DETGEVVPGTELPGDKHHLELIAEVPENISDSGGSGIAVEEGPG--------IPADIPSP 278
               E V      G++    +  EV   + +        EE PG          A  P+ 
Sbjct: 206 RTVDESVSS----GNQDDCIVNGEVDTPVGEEEIGPDEDEEEPGTYGVALYRFQALEPNE 261

Query: 279 I-MGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET 319
           +   +G  + +    E GWL G L+G+TG FP  +V+ C +T
Sbjct: 262 LDFEVGDKIRILATLEDGWLEGSLKGRTGIFPYRFVKLCPDT 303

Scaffold protein that links dynamin with actin-regulating proteins. May play a role in membrane trafficking between the cell surface and the Golgi.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	336
307192075	1267	Intersectin-1 [Harpegnathos saltator]	0.675	0.179	0.354	6e-34
322795863	1813	hypothetical protein SINV_80305 [Solenop	0.681	0.126	0.361	7e-34
332026969	1246	Intersectin-1 [Acromyrmex echinatior]	0.660	0.178	0.342	1e-32
328721586	1627	PREDICTED: intersectin-1 isoform 1 [Acyr	0.744	0.153	0.327	3e-32
328721590	1613	PREDICTED: intersectin-1 isoform 3 [Acyr	0.744	0.154	0.327	4e-32
307176875	1824	Intersectin-1 [Camponotus floridanus]	0.773	0.142	0.331	4e-32
383858957	1882	PREDICTED: intersectin-1-like [Megachile	0.675	0.120	0.367	5e-32
328793625	1761	PREDICTED: intersectin-1 [Apis mellifera	0.684	0.130	0.364	7e-32
340722813	1858	PREDICTED: intersectin-1-like [Bombus te	0.687	0.124	0.342	6e-31
380029395	1867	PREDICTED: LOW QUALITY PROTEIN: intersec	0.666	0.119	0.360	7e-31

>gi|307192075|gb|EFN75434.1| Intersectin-1 [Harpegnathos saltator]

 Score =  150 bits (380), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 102/288 (35%), Positives = 142/288 (49%), Gaps = 61/288 (21%)

Query: 80   QDVFCSVHLQLSTKEKDLEVNNSNLDDLKKTLANMMSD--KYYI---------------- 121
            +D    +  Q+ +K  D+E NN+ L+D+K  + N+++D  + Y+                
Sbjct: 747  KDKIADLQQQIDSKMSDIENNNAQLEDIKTQMKNLVTDCKQLYVTFDEKKKKVLELRASS 806

Query: 122  ---AAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGTIGDRTARFRGVSEYRRYRAIYEF 178
               ++  + +   GD  +  D+   V   +  W        +     V+   +YRA+YEF
Sbjct: 807  GNVSSADFATATWGDSGW--DDAPTVAGGDTPWLVSDSTTNSVDETAVTGVTKYRALYEF 864

Query: 179  VSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVPGTEL 238
            V+RN DE+SFQPGDII+VP  QNAEPGW+AGE+RG TGWFPESYVEP D TG VV   E 
Sbjct: 865  VARNQDEISFQPGDIILVPPVQNAEPGWMAGEIRGHTGWFPESYVEPVD-TGTVVSDNER 923

Query: 239  PG------DKHHLELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNA 292
                    +K  LE IAEVPEN+SD+G       E P + A IP+  +GLGT   ++  A
Sbjct: 924  AFIQQDSVEKRTLEGIAEVPENVSDAGS---LAGEAPIVEAIIPT--LGLGTSCDIRAVA 978

Query: 293  --------------EPG------------WLAGELRGQTGWFPESYVE 314
                          E G            W         GWFP+SYV+
Sbjct: 979  LFQYRPIMEQHLCFEKGETIYVSEQQNEWWYGSTSTENKGWFPKSYVK 1026

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322795863|gb|EFZ18542.1| hypothetical protein SINV_80305 [Solenopsis invicta]

 Score =  150 bits (380), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 102/282 (36%), Positives = 137/282 (48%), Gaps = 53/282 (18%)

Query: 80  QDVFCSVHLQLSTKEKDLEVNNSNLDDLKKTLANMMSD-KYYIAAYPYDSTEPGDL--TF 136
           +D    +  Q+ +K  D+E NN  L+D+K  + N++ D K     +     +  +L  + 
Sbjct: 713 KDKIADLQQQIDSKMSDIENNNGQLEDIKTQIKNIVVDCKQLYVTFDEKKKKVIELRSSS 772

Query: 137 NQDEVIYVTKKEND--WWTGTIGD----------RTARFRGVSEYRRYRAIYEFVSRNGD 184
           N     + T    D  W    + D           +     V   R+YRA+YEFV+RN D
Sbjct: 773 NVSAAAFATSAWGDSGWGDAPVSDTAWPVNETTASSVNETAVVGVRKYRALYEFVARNQD 832

Query: 185 ELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVPGTELPG---- 240
           E+SFQPGDII+VP  QNAEPGW+AGE+RG TGWFPESYVEP D TG      E       
Sbjct: 833 EISFQPGDIILVPPVQNAEPGWMAGEIRGHTGWFPESYVEPVD-TGAADLDNERTFIQQD 891

Query: 241 --DKHHLELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGT-------------- 284
             +K  LE IAEVPEN+SD+G  G    E P + A IP+  +GLGT              
Sbjct: 892 SVEKRTLEGIAEVPENVSDAGSLG---GEAPIVEAIIPT--LGLGTSCNIQVTALFPYRP 946

Query: 285 ------------VVPVKQNAEPGWLAGELRGQTGWFPESYVE 314
                        + V +  +  W      G  GWFP+SYV+
Sbjct: 947 TMEQHLSFEKGETINVSEQQDDWWYGSASTGNNGWFPKSYVK 988

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332026969|gb|EGI67065.1| Intersectin-1 [Acromyrmex echinatior]

 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/289 (34%), Positives = 138/289 (47%), Gaps = 67/289 (23%)

Query: 80  QDVFCSVHLQLSTKEKDLEVNNSNLDDLKKTLANMMSD--KYYIAAYPYDSTEPGDLTFN 137
           +D    +  Q+ +K  D+E NN+ L+D+K  + N++ D  + Y+    +D  +   +   
Sbjct: 689 KDKIIDLQQQIDSKMSDIENNNTQLEDIKTQMKNLVVDCKQLYVT---FDEKKQKVIELR 745

Query: 138 QDEVIYVTKKENDWWTGT-------------IGDRTA---RFRGVSEYRRYRAIYEFVSR 181
               +         W  +             + D  A       V   R+YRA+YEFV+R
Sbjct: 746 SSSNVSAADFATSAWGDSGWGDAPASDTAWPVNDTAASPENEAAVVGVRKYRALYEFVAR 805

Query: 182 NGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVPGTELPG- 240
           N DE+SFQPGDII+VP  QNAEPGW+AGE+RG TGWFPESYVEP D TG     T+L   
Sbjct: 806 NQDEISFQPGDIILVPPVQNAEPGWMAGEIRGHTGWFPESYVEPID-TG----ATDLDNE 860

Query: 241 ---------DKHHLELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGT------- 284
                    +K  LE IAEVPEN+SD+G  G    E P + A IP+  +GLGT       
Sbjct: 861 RTFIQQDSVEKRTLEGIAEVPENVSDAGSLG---GEAPVVEAIIPT--LGLGTPCAIQVT 915

Query: 285 -------------------VVPVKQNAEPGWLAGELRGQTGWFPESYVE 314
                               + V +  +  W      G  GWFP+ Y++
Sbjct: 916 TLFPYRPTMEQHLSFEKGETINVSEQQDDWWYGSTNTGNNGWFPKLYIK 964

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328721586|ref|XP_001947769.2| PREDICTED: intersectin-1 isoform 1 [Acyrthosiphon pisum] gi|328721588|ref|XP_003247349.1| PREDICTED: intersectin-1 isoform 2 [Acyrthosiphon pisum]

 Score =  145 bits (365), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/290 (32%), Positives = 145/290 (50%), Gaps = 40/290 (13%)

Query: 80  QDVFCSVHLQLSTKEKDLEVNNSNLDDLKKTLANMMSDKYYIAAYP-YDSTEPGDLTFNQ 138
           QD    ++ Q+  K++D+E NNS++D LK  L  ++ D   I  YP Y+      +   +
Sbjct: 571 QDKIDDLNSQIELKKQDVENNNSSIDQLKTQLTKLVEDCEKI--YPSYEENTKKVMEMKK 628

Query: 139 DEVIYVTKKENDWWTGT-----IGDRTARFRGVSEYRRYRAIYEFVSRNGDELSFQPGDI 193
            +   ++   +D W        + +++A     S Y++ RA+YEF +RN DELSFQPGDI
Sbjct: 629 SKAKEMSSWGDDAWNSAPTTDWVEEKSATTLESSAYKKCRALYEFEARNTDELSFQPGDI 688

Query: 194 IMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC---DETGEVVPGTELPGDKHH------ 244
           IMVP++QNAEPGWL GEL+  TGWFPESYVE     D+  +++   + P + +       
Sbjct: 689 IMVPLEQNAEPGWLTGELKNMTGWFPESYVETVDGSDDIRDIIANRQAPLEDNFVSTQKP 748

Query: 245 LELIAEVPEN-------ISDSGGSGIAVEEGPGIPADIPSPIMG-------------LGT 284
           LE IAE+PEN         D   S   +  G G   +I + ++               G 
Sbjct: 749 LEGIAELPENELGQGFETDDFSISNPKLILGHGKSVNIKAQVLNDWTGKDSTCLSLVAGD 808

Query: 285 VVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVPGTELPGDKHH 334
           ++ V +N +  W       + GWFP+S V   + T   +  T +P DK  
Sbjct: 809 IIDVTENQDDWWYGKTSDNRFGWFPKSSVSVIENT---IKDTNIPSDKQE 855

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328721590|ref|XP_003247350.1| PREDICTED: intersectin-1 isoform 3 [Acyrthosiphon pisum]

 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 95/290 (32%), Positives = 145/290 (50%), Gaps = 40/290 (13%)

Query: 80  QDVFCSVHLQLSTKEKDLEVNNSNLDDLKKTLANMMSDKYYIAAYP-YDSTEPGDLTFNQ 138
           QD    ++ Q+  K++D+E NNS++D LK  L  ++ D   I  YP Y+      +   +
Sbjct: 571 QDKIDDLNSQIELKKQDVENNNSSIDQLKTQLTKLVEDCEKI--YPSYEENTKKVMEMKK 628

Query: 139 DEVIYVTKKENDWWTGT-----IGDRTARFRGVSEYRRYRAIYEFVSRNGDELSFQPGDI 193
            +   ++   +D W        + +++A     S Y++ RA+YEF +RN DELSFQPGDI
Sbjct: 629 SKAKEMSSWGDDAWNSAPTTDWVEEKSATTLESSAYKKCRALYEFEARNTDELSFQPGDI 688

Query: 194 IMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC---DETGEVVPGTELPGDKHH------ 244
           IMVP++QNAEPGWL GEL+  TGWFPESYVE     D+  +++   + P + +       
Sbjct: 689 IMVPLEQNAEPGWLTGELKNMTGWFPESYVETVDGSDDIRDIIANRQAPLEDNFVSTQKP 748

Query: 245 LELIAEVPEN-------ISDSGGSGIAVEEGPGIPADIPSPIMG-------------LGT 284
           LE IAE+PEN         D   S   +  G G   +I + ++               G 
Sbjct: 749 LEGIAELPENELGQGFETDDFSISNPKLILGHGKSVNIKAQVLNDWTGKDSTCLSLVAGD 808

Query: 285 VVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVPGTELPGDKHH 334
           ++ V +N +  W       + GWFP+S V   + T   +  T +P DK  
Sbjct: 809 IIDVTENQDDWWYGKTSDNRFGWFPKSSVSVIENT---IKDTNIPSDKQE 855

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307176875|gb|EFN66216.1| Intersectin-1 [Camponotus floridanus]

 Score =  144 bits (364), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 105/317 (33%), Positives = 149/317 (47%), Gaps = 57/317 (17%)

Query: 49   AHQRLKITKDHTIKAKEEGDLKDTQSSSDGSQDVFCSVHLQLSTKEKDLEVNNSNLDDLK 108
            A  +L   +D   +   +    + Q +    +D    +  Q+ +K  D+E NN+ L+++K
Sbjct: 711  AKNKLNAAQDAAGQEAVKMAFDNKQITLKQMKDKIADLQQQIDSKMSDIENNNAQLEEIK 770

Query: 109  KTLANMMSD-KYYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDW----WTGTIG------ 157
              + ++++D K     +     +  +L  +   V       + W    W+          
Sbjct: 771  TQIKDLIADCKQLYINFDDKKKKVLELRASGSSVSAADFATSAWGDSAWSNAPSIASDAA 830

Query: 158  ---DRTARFRGVSE-----YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAG 209
               D T      +E      R+YRA+YEFV+RN DE+SFQPGDII VP  QNAEPGW+AG
Sbjct: 831  WPVDDTTTVNSTNEADVVGVRKYRALYEFVARNQDEISFQPGDIISVPPVQNAEPGWMAG 890

Query: 210  ELRGQTGWFPESYVEPCDETGEVVPGTELPG------DKHHLELIAEVPENISDSGGSGI 263
            E+RG TGWFPESYVEP D TG +    E         +K  LE IAEVPEN+SD+G  G 
Sbjct: 891  EIRGHTGWFPESYVEPVD-TGTISLDNERTFIQQDSVEKRTLEEIAEVPENVSDAGSLG- 948

Query: 264  AVEEGPGIPADIPSPIMGLGTVVPVKQNA--------------EPG------------WL 297
               E P + A IP+  +GLGT   ++  A              E G            W 
Sbjct: 949  --GEAPIVEAIIPT--LGLGTSCHIEATALFPYRPTMEQHLSFEKGETIYVSEQQADWWY 1004

Query: 298  AGELRGQTGWFPESYVE 314
                    GWFP+SYV+
Sbjct: 1005 GSTSNENKGWFPKSYVK 1021

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383858957|ref|XP_003704965.1| PREDICTED: intersectin-1-like [Megachile rotundata]

 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 104/283 (36%), Positives = 135/283 (47%), Gaps = 56/283 (19%)

Query: 80   QDVFCSVHLQLSTKEKDLEVNNSNLDDLKKTLANMMSD--KYYIA--------------- 122
            +D    +  Q++ K  D+E NN  L D+K  L N++SD    Y+                
Sbjct: 785  KDKIADLQEQINAKMADIENNNGQLQDIKTQLTNLVSDCKNLYVTFEDKKLKVLELRASG 844

Query: 123  ----AYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGTIGDRTARFRGVSEYRRYRAIYEF 178
                   Y ++  GD  +N D    V   +N W         A         +YRA+YEF
Sbjct: 845  GIGTGTDYTTSAWGDSAWN-DTTEPV--DDNAWPVTDTTTTNAVEETTPGVMKYRALYEF 901

Query: 179  VSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD--ETGEVVPGT 236
            V+RN DE+SFQPGDII+VP  QN EPGW+AGE+RG TGWFPESYVEP D   T +     
Sbjct: 902  VARNQDEISFQPGDIILVPPVQNTEPGWMAGEIRGHTGWFPESYVEPVDAGSTNDSAFIQ 961

Query: 237  ELPGDKHHLELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNA---- 292
            +   +K  LE IAEVPEN+SD+G  G    E P +   IP+  +GLG    V+  A    
Sbjct: 962  QDSVEKRTLEGIAEVPENVSDAGSLG---GEPPIVEPIIPT--LGLGVACDVQATALFQY 1016

Query: 293  ----------EPG-----------WLAGELRGQTGWFPESYVE 314
                      E G           W  G     TGWFP+SYV+
Sbjct: 1017 RPTTEQHLPFEKGDLIKVIEQQGDWWYGTSNAGTGWFPKSYVK 1059

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328793625|ref|XP_393062.4| PREDICTED: intersectin-1 [Apis mellifera]

 Score =  144 bits (362), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 102/280 (36%), Positives = 138/280 (49%), Gaps = 50/280 (17%)

Query: 80   QDVFCSVHLQLSTKEKDLEVNNSNLDDLKKTLANMMSD-KYYIAAYPYDSTEPGDLTFNQ 138
            +D    +  Q+  K  D+E NN  L D+K  L  +++D K     +     +  +L  + 
Sbjct: 784  KDKIADLQQQIDVKMADIENNNGQLQDIKTQLETLITDCKNLYVTFEDKKLKVLELRASN 843

Query: 139  DE---VIYVTKKEND-WW---TGTIGDRT------ARFRGVSE----YRRYRAIYEFVSR 181
            D      Y T   +D  W   + TI D T           V E      +YRA+YEFV+R
Sbjct: 844  DTGAGTDYTTSAWDDSAWNDTSATINDSTWPVNDTTTINTVEETTPGVMKYRALYEFVAR 903

Query: 182  NGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVPGTELPGD 241
            N DE+SFQPGDII+VP  QNAEPGW+AGE+RG TGWFPESYVEP D +G       +  D
Sbjct: 904  NQDEISFQPGDIILVPPVQNAEPGWMAGEIRGHTGWFPESYVEPID-SGTANDNAFIQQD 962

Query: 242  ---KHHLELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGL---------------- 282
               K  LE IAEVPEN+SD+G    +++E P +   IP+P +G                 
Sbjct: 963  SVEKRTLEGIAEVPENVSDAG----SLDEPPPVEPLIPTPGLGTICDIQVTTLYYYHPTM 1018

Query: 283  --------GTVVPVKQNAEPGWLAGELRGQTGWFPESYVE 314
                    G ++ V +     W      G  GWFP+SYV+
Sbjct: 1019 DQHLPFEKGDIIKVDEQQGDWWHGISNSGIKGWFPKSYVK 1058

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340722813|ref|XP_003399795.1| PREDICTED: intersectin-1-like [Bombus terrestris]

 Score =  140 bits (354), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 96/280 (34%), Positives = 127/280 (45%), Gaps = 49/280 (17%)

Query: 80   QDVFCSVHLQLSTKEKDLEVNNSNLDDLKKTLANMMSD--KYYI---------------- 121
            +D    +  Q+  K  D+E NN  L D+K  L  +M+D    Y+                
Sbjct: 759  KDKIADLQQQIDAKMADIENNNGQLQDIKTQLETLMADCKNLYLTFEDKKLKVLELRASG 818

Query: 122  ---AAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGTIGDRTARFRGVSEYRRYRAIYEF 178
               A   Y ++  GD  +N          ++ W         A         +YRA+YEF
Sbjct: 819  GTGAGTDYTTSAWGDSGWNDTSAAV---NDSAWPVNDTTTTNAVEETTPGVMKYRALYEF 875

Query: 179  VSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVPGTEL 238
            ++RN DE+SFQPGDII+VP  QNAEPGW+AGE+RG TGWFPESYVEP D  G       +
Sbjct: 876  IARNQDEISFQPGDIILVPPVQNAEPGWMAGEIRGHTGWFPESYVEPID-VGSANDNAFI 934

Query: 239  PGD---KHHLELIAEVPENISDSGGSGIAVEE--------GPGIPADIPSP--------- 278
              D   K  LE IAEVPEN+SD+G  G             G G+  DI            
Sbjct: 935  QQDSVEKRTLEGIAEVPENVSDAGSLGDEPPPVEPIIPTLGLGVVCDIQVTTLYHYRPTI 994

Query: 279  ----IMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVE 314
                +   G ++ V +     W      G  GWFP+SYV+
Sbjct: 995  EQHLLFEKGDIIKVDEQQGDWWYGTSGNGAKGWFPKSYVK 1034

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380029395|ref|XP_003698359.1| PREDICTED: LOW QUALITY PROTEIN: intersectin-1-like [Apis florea]

 Score =  140 bits (354), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 103/286 (36%), Positives = 138/286 (48%), Gaps = 62/286 (21%)

Query: 80   QDVFCSVHLQLSTKEKDLEVNNSNLDDLKKTLANMMSDKYYIAAYPYDSTEPGDLTFNQD 139
            +D    +  Q+  K  D+E NN  L D+K  L  +++D   +    Y + E   L   + 
Sbjct: 786  KDKIADLQQQIDAKMTDIENNNGQLQDIKTQLETLITDCKNL----YVTFEDKKLKVLEL 841

Query: 140  EVIYVTKKENDWWTGTIGDR------------------TARFRGVSE----YRRYRAIYE 177
                 T    D+ T   GD                   T+    V E      +YRA+YE
Sbjct: 842  RASSDTGAGTDYTTSAWGDSAWNDTSASINDSAWPVNDTSTTNTVEETTPGIMKYRALYE 901

Query: 178  FVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVPGTE 237
            FV+RN DE+SFQPGDII+VP  QNAEPGW+AGE+RG TGWFPESYVEP D TG       
Sbjct: 902  FVARNQDEISFQPGDIILVPPVQNAEPGWMAGEIRGHTGWFPESYVEPID-TGIANDNAF 960

Query: 238  LPGD---KHHLELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVP------- 287
            +  D   K  LE IAEVPEN+SD+G    +++E P +   IP+  +GLGT+         
Sbjct: 961  IQQDSVEKRTLEGIAEVPENVSDAG----SLDEPPPVEPLIPT--LGLGTICDIQVTTLY 1014

Query: 288  -----------------VKQNAEPG--WLAGELRGQTGWFPESYVE 314
                             +K + + G  W      G  GWFP+SYV+
Sbjct: 1015 YYRPTMDQHLPFEKGDIIKVDEQQGDWWHGISNSGIKGWFPKSYVK 1060

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	336
FB|FBgn0023388	1097	Dap160 "Dynamin associated pro	0.767	0.235	0.329	5.1e-24
UNIPROTKB|E1BUQ4	1712	ITSN1 "Uncharacterized protein	0.595	0.116	0.324	2.3e-23
ZFIN|ZDB-GENE-030616-226	1746	itsn1 "intersectin 1 (SH3 doma	0.738	0.142	0.283	6.2e-21
UNIPROTKB|A8CTY3	1660	ITSN1 "Intersectin 1 long form	0.598	0.121	0.314	1.3e-20
UNIPROTKB|A8CTX8	1716	ITSN1 "Intersectin-1" [Homo sa	0.598	0.117	0.314	1.4e-20
UNIPROTKB|E9PD98	1721	ITSN1 "Intersectin-1" [Homo sa	0.598	0.116	0.314	1.4e-20
UNIPROTKB|Q15811	1721	ITSN1 "Intersectin-1" [Homo sa	0.598	0.116	0.314	1.4e-20
UNIPROTKB|B4DTM2	1215	ITSN1 "Intersectin-1" [Homo sa	0.541	0.149	0.323	9.7e-20
UNIPROTKB|E7ERJ0	1178	ITSN1 "Intersectin-1" [Homo sa	0.541	0.154	0.323	2.8e-19
UNIPROTKB|G3N0W1	1215	ITSN1 "Uncharacterized protein	0.398	0.110	0.346	3.1e-19

FB|FBgn0023388 Dap160 "Dynamin associated protein 160" [Drosophila melanogaster (taxid:7227)]

 Score = 277 (102.6 bits), Expect = 5.1e-24, Sum P(2) = 5.1e-24
 Identities = 98/297 (32%), Positives = 142/297 (47%)

Query:    48 WAHQRLKITKDHTIKAKEEGDLKDTQSSSD--GSQDVFCS-VHLQLS---TKEKDL---- 97
             +AH++L I +   IK K E   K+ +S  +   + DV  S +  +LS   TK +DL    
Sbjct:   552 FAHKQLIINQ---IKDKVENISKEIESKKEDINTNDVQMSELKAELSALITKCEDLYKEY 608

Query:    98 EVNNSNLDDLKKTLANMMSDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGTIG 157
             +V  +++ +LK    N  S     +A+   S+   + T       Y     ND     + 
Sbjct:   609 DVQRTSVLELKYNRKNETSVS---SAWDTGSSSAWEETGTTVTDPYAVAS-ND--ISALA 662

Query:   158 DRTARFRGVSE--YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQT 215
                    G +   + +Y+A+YEF +RN +E++F PGDII+VP++QNAEPGWLAGE+ G T
Sbjct:   663 APAVDLGGPAPEGFVKYQAVYEFNARNAEEITFVPGDIILVPLEQNAEPGWLAGEINGHT 722

Query:   216 GWFPESYVEPCDETGEVVP--GTELPGDKHHLELIAEVPENISDSG---GSGIAVEEG-- 268
             GWFPESYVE   E GEV P    E P D     +     +NI+ S     S      G  
Sbjct:   723 GWFPESYVEKL-EVGEVAPVAAVEAPVDAQVATVADTYNDNINTSSIPAASADLTAAGDV 781

Query:   269 -------PGIPADIPSPIMGLGTVVPV-KQNAEPGWLAGELRGQTGWFPESYVEPCD 317
                    P   A+        G +V V K+  E  W  G +  +TG FP +YV+  D
Sbjct:   782 EYYIAAYPYESAEEGDLSFSAGEMVMVIKKEGE--WWTGTIGSRTGMFPSNYVQKAD 836

GO:0007269 "neurotransmitter secretion" evidence=NAS

GO:0048488 "synaptic vesicle endocytosis" evidence=IMP;TAS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0051124 "synaptic growth at neuromuscular junction" evidence=IMP

GO:0008104 "protein localization" evidence=IMP

GO:0042734 "presynaptic membrane" evidence=IDA

GO:0045746 "negative regulation of Notch signaling pathway" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0045179 "apical cortex" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0002052 "positive regulation of neuroblast proliferation" evidence=IMP

GO:0045860 "positive regulation of protein kinase activity" evidence=IDA

GO:0008021 "synaptic vesicle" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

UNIPROTKB|E1BUQ4 ITSN1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 251 (93.4 bits), Expect = 2.3e-23, Sum P(3) = 2.3e-23
 Identities = 81/250 (32%), Positives = 117/250 (46%)

Query:   115 MSDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGTIGDRTARFRGVSEYRRYR- 173
             MS + Y+A Y Y+S+E GDLTF Q ++I VTKK+ DWWTGT+GD+T  F   S Y R + 
Sbjct:   992 MSGEEYVAMYTYESSEQGDLTFQQGDMILVTKKDGDWWTGTLGDKTGVFP--SNYVRLKD 1049

Query:   174 ---------------------AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL- 211
                                   I  + +   ++L+  PG +I++  K+N   GW  GEL 
Sbjct:  1050 SEASGAAGKTGSLGKKPEIAQVIASYTATGPEQLTLAPGQLILIR-KKNPG-GWWEGELQ 1107

Query:   212 -RG---QTGWFPESYVEPCDE-TGEVVPGTELPGDKHHLELIAEVPENISDSGGSGIAVE 266
              RG   Q GWFP +YV+     T +  P TELP     L  + +V           I + 
Sbjct:  1108 ARGKKRQIGWFPANYVKLLSPGTSKTTP-TELPKSTA-LPSVCQV-----------IGMY 1154

Query:   267 EGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVPGT 326
             +      D        G ++ V    +P W  GE+ GQ G FP +YV+    T ++ P  
Sbjct:  1155 DYTAQNDD--ELAFNKGQIINVLNKEDPDWWKGEVNGQVGLFPSNYVKL---TTDMDPSQ 1209

Query:   327 ELPGDKHHLE 336
             +   D H L+
Sbjct:  1210 QWCADLHLLD 1219

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0006897 "endocytosis" evidence=IEA

GO:0035023 "regulation of Rho protein signal transduction" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005905 "coated pit" evidence=IEA

GO:0007264 "small GTPase mediated signal transduction" evidence=IEA

GO:0019209 "kinase activator activity" evidence=IEA

GO:0030027 "lamellipodium" evidence=IEA

GO:0030139 "endocytic vesicle" evidence=IEA

GO:0032947 "protein complex scaffold" evidence=IEA

GO:0043524 "negative regulation of neuron apoptotic process" evidence=IEA

GO:0051897 "positive regulation of protein kinase B signaling cascade" evidence=IEA

GO:0070064 "proline-rich region binding" evidence=IEA

ZFIN|ZDB-GENE-030616-226 itsn1 "intersectin 1 (SH3 domain protein)" [Danio rerio (taxid:7955)]

 Score = 247 (92.0 bits), Expect = 6.2e-21, Sum P(2) = 6.2e-21
 Identities = 84/296 (28%), Positives = 123/296 (41%)

Query:    67 GDLKDTQSSSDGSQDVFCSVHLQLSTKEKDLEVNNSNLDDLKKTLANMMSDKYYIAAYPY 126
             G ++ + S   GS D   SV     +  K  E+      +      +M   K Y+A Y Y
Sbjct:   981 GPVRKSMSIESGSSDSPPSVKRPSPSLNKPTELGEGQNSNSN----SMYPSKEYVAMYTY 1036

Query:   127 DSTEPGDLTFNQDEVIYVTKKENDWWTGTIGDRTARF----------RGVSEYRRY---- 172
             +S E GDLTF Q +VI VTKKE DWWTGT+  +   F           G+    +     
Sbjct:  1037 ESNEQGDLTFQQGDVITVTKKEGDWWTGTVSGKIGVFPSNYVKPKESEGLGSAGKTGSLG 1096

Query:   173 ------RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL--RG---QTGWFPES 221
                   + I  + +   ++L+  PG +I++  K+N   GW  GEL  RG   Q GWFP +
Sbjct:  1097 KKPEIAQVIAPYTATGAEQLTLAPGQLILIR-KKNPG-GWWEGELQARGKKRQIGWFPAN 1154

Query:   222 YVEPCD-ETGEVVPGTELPGDKHHLELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIM 280
             YV+     T +  P    P        + +V       G      +    +P        
Sbjct:  1155 YVKLLSPSTSKTTPTDPNPPKLPTPNAVCQV------IGMYDYTAQNDDELP-------F 1201

Query:   281 GLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVPGTELPGDKHHLE 336
             G G ++ V    +P W  GEL G  G FP +YV+   +T    P  +   D H L+
Sbjct:  1202 GKGQIINVLSREDPDWWKGELNGSVGLFPSNYVKLTTDTD---PSQQWCADLHLLD 1254

GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0006897 "endocytosis" evidence=IEA

GO:0032947 "protein complex scaffold" evidence=IEA

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0035023 "regulation of Rho protein signal transduction" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|A8CTY3 ITSN1 "Intersectin 1 long form variant 3" [Homo sapiens (taxid:9606)]

 Score = 242 (90.2 bits), Expect = 1.3e-20, Sum P(3) = 1.3e-20
 Identities = 79/251 (31%), Positives = 117/251 (46%)

Query:   114 MMSDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGTIGDRTARFRGVSEYRRYR 173
             ++S + +IA Y Y+S+E GDLTF Q +VI VTKK+ DWWTGT+GD+   F   S Y R +
Sbjct:   996 VVSGEEFIAMYTYESSEQGDLTFQQGDVILVTKKDGDWWTGTVGDKAGVFP--SNYVRLK 1053

Query:   174 ----------------------AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL 211
                                    I  + +   ++L+  PG +I++  K+N   GW  GEL
Sbjct:  1054 DSEGSGTAGKTGSLGKKPEIAQVIASYTATGPEQLTLAPGQLILIR-KKNPG-GWWEGEL 1111

Query:   212 --RG---QTGWFPESYVEPCDE-TGEVVPGTELPGDKHHLELIAEVPENISDSGGSGIAV 265
               RG   Q GWFP +YV+     T ++ P TE P        +A V + I   G      
Sbjct:  1112 QARGKKRQIGWFPANYVKLLSPGTSKITP-TEPPKST----ALAAVCQVI---GMYDYTA 1163

Query:   266 EEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVPG 325
             +    +           G ++ V    +P W  GE+ GQ G FP +YV+    T ++ P 
Sbjct:  1164 QNDDELA-------FNKGQIINVLNKEDPDWWKGEVNGQVGLFPSNYVKL---TTDMDPS 1213

Query:   326 TELPGDKHHLE 336
              +   D H L+
Sbjct:  1214 QQWCSDLHLLD 1224

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006897 "endocytosis" evidence=IEA

GO:0032947 "protein complex scaffold" evidence=IEA

GO:0035023 "regulation of Rho protein signal transduction" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

UNIPROTKB|A8CTX8 ITSN1 "Intersectin-1" [Homo sapiens (taxid:9606)]

 Score = 242 (90.2 bits), Expect = 1.4e-20, Sum P(3) = 1.4e-20
 Identities = 79/251 (31%), Positives = 117/251 (46%)

Query:   114 MMSDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGTIGDRTARFRGVSEYRRYR 173
             ++S + +IA Y Y+S+E GDLTF Q +VI VTKK+ DWWTGT+GD+   F   S Y R +
Sbjct:   996 VVSGEEFIAMYTYESSEQGDLTFQQGDVILVTKKDGDWWTGTVGDKAGVFP--SNYVRLK 1053

Query:   174 ----------------------AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL 211
                                    I  + +   ++L+  PG +I++  K+N   GW  GEL
Sbjct:  1054 DSEGSGTAGKTGSLGKKPEIAQVIASYTATGPEQLTLAPGQLILIR-KKNPG-GWWEGEL 1111

Query:   212 --RG---QTGWFPESYVEPCDE-TGEVVPGTELPGDKHHLELIAEVPENISDSGGSGIAV 265
               RG   Q GWFP +YV+     T ++ P TE P        +A V + I   G      
Sbjct:  1112 QARGKKRQIGWFPANYVKLLSPGTSKITP-TEPPKST----ALAAVCQVI---GMYDYTA 1163

Query:   266 EEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVPG 325
             +    +           G ++ V    +P W  GE+ GQ G FP +YV+    T ++ P 
Sbjct:  1164 QNDDELA-------FNKGQIINVLNKEDPDWWKGEVNGQVGLFPSNYVKL---TTDMDPS 1213

Query:   326 TELPGDKHHLE 336
              +   D H L+
Sbjct:  1214 QQWCSDLHLLD 1224

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006897 "endocytosis" evidence=IEA

GO:0032947 "protein complex scaffold" evidence=IEA

GO:0035023 "regulation of Rho protein signal transduction" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

UNIPROTKB|E9PD98 ITSN1 "Intersectin-1" [Homo sapiens (taxid:9606)]

 Score = 242 (90.2 bits), Expect = 1.4e-20, Sum P(3) = 1.4e-20
 Identities = 79/251 (31%), Positives = 117/251 (46%)

Query:   114 MMSDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGTIGDRTARFRGVSEYRRYR 173
             ++S + +IA Y Y+S+E GDLTF Q +VI VTKK+ DWWTGT+GD+   F   S Y R +
Sbjct:  1001 VVSGEEFIAMYTYESSEQGDLTFQQGDVILVTKKDGDWWTGTVGDKAGVFP--SNYVRLK 1058

Query:   174 ----------------------AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL 211
                                    I  + +   ++L+  PG +I++  K+N   GW  GEL
Sbjct:  1059 DSEGSGTAGKTGSLGKKPEIAQVIASYTATGPEQLTLAPGQLILIR-KKNPG-GWWEGEL 1116

Query:   212 --RG---QTGWFPESYVEPCDE-TGEVVPGTELPGDKHHLELIAEVPENISDSGGSGIAV 265
               RG   Q GWFP +YV+     T ++ P TE P        +A V + I   G      
Sbjct:  1117 QARGKKRQIGWFPANYVKLLSPGTSKITP-TEPPKST----ALAAVCQVI---GMYDYTA 1168

Query:   266 EEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVPG 325
             +    +           G ++ V    +P W  GE+ GQ G FP +YV+    T ++ P 
Sbjct:  1169 QNDDELA-------FNKGQIINVLNKEDPDWWKGEVNGQVGLFPSNYVKL---TTDMDPS 1218

Query:   326 TELPGDKHHLE 336
              +   D H L+
Sbjct:  1219 QQWCSDLHLLD 1229

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006897 "endocytosis" evidence=IEA

GO:0032947 "protein complex scaffold" evidence=IEA

GO:0035023 "regulation of Rho protein signal transduction" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

UNIPROTKB|Q15811 ITSN1 "Intersectin-1" [Homo sapiens (taxid:9606)]

 Score = 242 (90.2 bits), Expect = 1.4e-20, Sum P(3) = 1.4e-20
 Identities = 79/251 (31%), Positives = 117/251 (46%)

Query:   114 MMSDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGTIGDRTARFRGVSEYRRYR 173
             ++S + +IA Y Y+S+E GDLTF Q +VI VTKK+ DWWTGT+GD+   F   S Y R +
Sbjct:  1001 VVSGEEFIAMYTYESSEQGDLTFQQGDVILVTKKDGDWWTGTVGDKAGVFP--SNYVRLK 1058

Query:   174 ----------------------AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL 211
                                    I  + +   ++L+  PG +I++  K+N   GW  GEL
Sbjct:  1059 DSEGSGTAGKTGSLGKKPEIAQVIASYTATGPEQLTLAPGQLILIR-KKNPG-GWWEGEL 1116

Query:   212 --RG---QTGWFPESYVEPCDE-TGEVVPGTELPGDKHHLELIAEVPENISDSGGSGIAV 265
               RG   Q GWFP +YV+     T ++ P TE P        +A V + I   G      
Sbjct:  1117 QARGKKRQIGWFPANYVKLLSPGTSKITP-TEPPKST----ALAAVCQVI---GMYDYTA 1168

Query:   266 EEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVPG 325
             +    +           G ++ V    +P W  GE+ GQ G FP +YV+    T ++ P 
Sbjct:  1169 QNDDELA-------FNKGQIINVLNKEDPDWWKGEVNGQVGLFPSNYVKL---TTDMDPS 1218

Query:   326 TELPGDKHHLE 336
              +   D H L+
Sbjct:  1219 QQWCSDLHLLD 1229

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0035023 "regulation of Rho protein signal transduction" evidence=IEA

GO:0030054 "cell junction" evidence=IEA

GO:0045202 "synapse" evidence=IEA

GO:0019209 "kinase activator activity" evidence=IEA

GO:0030139 "endocytic vesicle" evidence=IEA

GO:0043524 "negative regulation of neuron apoptotic process" evidence=IEA

GO:0051897 "positive regulation of protein kinase B signaling cascade" evidence=IEA

GO:0030027 "lamellipodium" evidence=IEA

GO:0043005 "neuron projection" evidence=IEA

GO:0005509 "calcium ion binding" evidence=NAS

GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=NAS

GO:0070064 "proline-rich region binding" evidence=IPI

GO:0005886 "plasma membrane" evidence=IDA

GO:0005905 "coated pit" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0032947 "protein complex scaffold" evidence=IDA

GO:0048488 "synaptic vesicle endocytosis" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0006915 "apoptotic process" evidence=TAS

GO:0007264 "small GTPase mediated signal transduction" evidence=TAS

GO:0048011 "neurotrophin TRK receptor signaling pathway" evidence=TAS

GO:0051056 "regulation of small GTPase mediated signal transduction" evidence=TAS

UNIPROTKB|B4DTM2 ITSN1 "Intersectin-1" [Homo sapiens (taxid:9606)]

 Score = 237 (88.5 bits), Expect = 9.7e-20, Sum P(3) = 9.7e-20
 Identities = 74/229 (32%), Positives = 108/229 (47%)

Query:   114 MMSDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGTIGDRTARFRGVSEYRRYR 173
             ++S + +IA Y Y+S+E GDLTF Q +VI VTKK+ DWWTGT+GD+   F   S Y R +
Sbjct:   996 VVSGEEFIAMYTYESSEQGDLTFQQGDVILVTKKDGDWWTGTVGDKAGVFP--SNYVRLK 1053

Query:   174 ----------------------AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL 211
                                    I  + +   ++L+  PG +I++  K+N   GW  GEL
Sbjct:  1054 DSEGSGTAGKTGSLGKKPEIAQVIASYTATGPEQLTLAPGQLILIR-KKNPG-GWWEGEL 1111

Query:   212 --RG---QTGWFPESYVEPCDE-TGEVVPGTELPGDKHHLELIAEVPENISDSGGSGIAV 265
               RG   Q GWFP +YV+     T ++ P TE P        +A V + I   G      
Sbjct:  1112 QARGKKRQIGWFPANYVKLLSPGTSKITP-TEPPKST----ALAAVCQVI---GMYDYTA 1163

Query:   266 EEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVE 314
             +    +           G ++ V    +P W  GE+ GQ G FP +YV+
Sbjct:  1164 QNDDELA-------FNKGQIINVLNKEDPDWWKGEVNGQVGLFPSNYVK 1205

GO:0005509 "calcium ion binding" evidence=IEA

GO:0006897 "endocytosis" evidence=IEA

GO:0032947 "protein complex scaffold" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

UNIPROTKB|E7ERJ0 ITSN1 "Intersectin-1" [Homo sapiens (taxid:9606)]

 Score = 237 (88.5 bits), Expect = 2.8e-19, Sum P(3) = 2.8e-19
 Identities = 74/229 (32%), Positives = 108/229 (47%)

Query:   114 MMSDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGTIGDRTARFRGVSEYRRYR 173
             ++S + +IA Y Y+S+E GDLTF Q +VI VTKK+ DWWTGT+GD+   F   S Y R +
Sbjct:   959 VVSGEEFIAMYTYESSEQGDLTFQQGDVILVTKKDGDWWTGTVGDKAGVFP--SNYVRLK 1016

Query:   174 ----------------------AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL 211
                                    I  + +   ++L+  PG +I++  K+N   GW  GEL
Sbjct:  1017 DSEGSGTAGKTGSLGKKPEIAQVIASYTATGPEQLTLAPGQLILIR-KKNPG-GWWEGEL 1074

Query:   212 --RG---QTGWFPESYVEPCDE-TGEVVPGTELPGDKHHLELIAEVPENISDSGGSGIAV 265
               RG   Q GWFP +YV+     T ++ P TE P        +A V + I   G      
Sbjct:  1075 QARGKKRQIGWFPANYVKLLSPGTSKITP-TEPPKST----ALAAVCQVI---GMYDYTA 1126

Query:   266 EEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVE 314
             +    +           G ++ V    +P W  GE+ GQ G FP +YV+
Sbjct:  1127 QNDDELA-------FNKGQIINVLNKEDPDWWKGEVNGQVGLFPSNYVK 1168

GO:0005509 "calcium ion binding" evidence=IEA

GO:0006897 "endocytosis" evidence=IEA

GO:0032947 "protein complex scaffold" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

UNIPROTKB|G3N0W1 ITSN1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 207 (77.9 bits), Expect = 3.1e-19, Sum P(4) = 3.1e-19
 Identities = 51/147 (34%), Positives = 68/147 (46%)

Query:   151 WWTGTIGDRTARFRGVSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE 210
             W T   G  T   +   +   YRA+Y F SR+ DE++ QPGDI+MV   Q  EPGWL GE
Sbjct:   724 WSTAEKGPLTISAQENIKVVYYRALYPFESRSHDEITIQPGDIVMVDESQTGEPGWLGGE 783

Query:   211 LRGQTGWFPESYVEPCDET---GEVVPGTELPGDKHHLELIAEVPENISDSGGSGIAVEE 267
             L+G+TGWFP +Y E   E      V P TE          + E P   S +         
Sbjct:   784 LKGKTGWFPANYAEKIPENEVPAPVKPVTEAASTPTPKVAVCETPAPSSTT--------- 834

Query:   268 GPGIPADIPSPIMGLGTVVPVKQNAEP 294
              P  P++ P+      +  P   N +P
Sbjct:   835 -PAEPSETPNNWADFSSTWPTSTNEKP 860

GO:0070064 "proline-rich region binding" evidence=IEA

GO:0051897 "positive regulation of protein kinase B signaling cascade" evidence=IEA

GO:0043524 "negative regulation of neuron apoptotic process" evidence=IEA

GO:0032947 "protein complex scaffold" evidence=IEA

GO:0030139 "endocytic vesicle" evidence=IEA

GO:0030027 "lamellipodium" evidence=IEA

GO:0019209 "kinase activator activity" evidence=IEA

GO:0007264 "small GTPase mediated signal transduction" evidence=IEA

GO:0005905 "coated pit" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0006897 "endocytosis" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	336
cd11836	55	cd11836, SH3_Intersectin_1, First Src homology 3 d	1e-28
cd11838	52	cd11838, SH3_Intersectin_3, Third Src homology 3 d	4e-20
cd11988	57	cd11988, SH3_Intersectin2_1, First Src homology 3	1e-18
cd11987	55	cd11987, SH3_Intersectin1_1, First Src homology 3	2e-18
smart00326	56	smart00326, SH3, Src homology 3 domains	1e-15
cd11992	52	cd11992, SH3_Intersectin2_3, Third Src homology 3	5e-15
cd11991	52	cd11991, SH3_Intersectin1_3, Third Src homology 3	8e-15
cd11877	53	cd11877, SH3_PIX, Src Homology 3 domain of Pak Int	2e-13
cd11823	53	cd11823, SH3_Nostrin, Src homology 3 domain of Nit	2e-13
cd11840	53	cd11840, SH3_Intersectin_5, Fifth Src homology 3 d	4e-13
cd11882	54	cd11882, SH3_GRAF-like, Src Homology 3 domain of G	7e-13
cd00174	51	cd00174, SH3, Src Homology 3 domain superfamily	2e-12
cd11884	56	cd11884, SH3_MYO15, Src Homology 3 domain of Myosi	2e-11
cd11836	55	cd11836, SH3_Intersectin_1, First Src homology 3 d	3e-11
cd11875	55	cd11875, SH3_CD2AP-like_3, Third Src Homology 3 do	4e-11
cd11763	55	cd11763, SH3_SNX9_like, Src Homology 3 domain of S	5e-11
cd12142	55	cd12142, SH3_D21-like, Src Homology 3 domain of SH	9e-11
cd11771	60	cd11771, SH3_Pex13p_fungal, Src Homology 3 domain	1e-10
cd11826	52	cd11826, SH3_Abi, Src homology 3 domain of Abl Int	2e-10
cd11772	53	cd11772, SH3_OSTF1, Src Homology 3 domain of metaz	2e-10
cd11805	53	cd11805, SH3_GRB2_like_C, C-terminal Src homology	2e-10
cd12056	57	cd12056, SH3_CD2AP_3, Third Src Homology 3 domain	2e-10
cd11827	53	cd11827, SH3_MyoIe_If_like, Src homology 3 domain	3e-10
cd11976	54	cd11976, SH3_VAV1_2, C-terminal (or second) Src ho	3e-10
cd11781	53	cd11781, SH3_Sorbs_1, First Src Homology 3 domain	3e-10
cd11843	53	cd11843, SH3_PACSIN, Src homology 3 domain of Prot	7e-10
cd11789	55	cd11789, SH3_Nebulin_family_C, C-terminal Src Homo	8e-10
cd11978	56	cd11978, SH3_VAV3_2, C-terminal (or second) Src ho	8e-10
cd11830	54	cd11830, SH3_VAV_2, C-terminal (or second) Src hom	1e-09
cd00174	51	cd00174, SH3, Src Homology 3 domain superfamily	2e-09
cd11786	53	cd11786, SH3_SH3RF_1, First Src Homology 3 domain	2e-09
cd11842	55	cd11842, SH3_Ysc84p_like, Src homology 3 domain of	2e-09
cd12061	54	cd12061, SH3_betaPIX, Src Homology 3 domain of bet	2e-09
cd11803	55	cd11803, SH3_Endophilin_A, Src homology 3 domain o	2e-09
cd11793	55	cd11793, SH3_ephexin1_like, Src homology 3 domain	3e-09
pfam07653	53	pfam07653, SH3_2, Variant SH3 domain	4e-09
cd11977	58	cd11977, SH3_VAV2_2, C-terminal (or second) Src ho	4e-09
cd11818	50	cd11818, SH3_Eve1_5, Fifth Src homology 3 domain o	6e-09
smart00326	56	smart00326, SH3, Src homology 3 domains	7e-09
pfam00018	47	pfam00018, SH3_1, SH3 domain	7e-09
cd11837	53	cd11837, SH3_Intersectin_2, Second Src homology 3	7e-09
cd11934	59	cd11934, SH3_Lasp1_C, C-terminal Src Homology 3 do	1e-08
cd12060	58	cd12060, SH3_alphaPIX, Src Homology 3 domain of al	1e-08
cd11996	54	cd11996, SH3_Intersectin2_5, Fifth Src homology 3	2e-08
cd11780	55	cd11780, SH3_Sorbs_3, Third (or C-terminal) Src Ho	2e-08
cd11949	53	cd11949, SH3_GRB2_C, C-terminal Src homology 3 dom	2e-08
cd11816	51	cd11816, SH3_Eve1_3, Third Src homology 3 domain o	4e-08
cd11950	53	cd11950, SH3_GRAP2_C, C-terminal Src homology 3 do	4e-08
cd11841	54	cd11841, SH3_SH3YL1_like, Src homology 3 domain of	4e-08
cd11829	52	cd11829, SH3_GAS7, Src homology 3 domain of Growth	5e-08
cd11951	53	cd11951, SH3_GRAP_C, C-terminal Src homology 3 dom	5e-08
cd11995	54	cd11995, SH3_Intersectin1_5, Fifth Src homology 3	6e-08
cd12064	56	cd12064, SH3_GRAF, Src Homology 3 domain of GTPase	6e-08
cd11935	58	cd11935, SH3_Nebulette_C, C-terminal Src Homology	7e-08
cd11813	53	cd11813, SH3_SGSM3, Src Homology 3 domain of Small	8e-08
cd11914	59	cd11914, SH3_BAIAP2L2, Src Homology 3 domain of Br	8e-08
cd11873	53	cd11873, SH3_CD2AP-like_1, First Src Homology 3 do	9e-08
cd11883	55	cd11883, SH3_Sdc25, Src Homology 3 domain of Sdc25	9e-08
cd11972	61	cd11972, SH3_Abi2, Src homology 3 domain of Abl In	9e-08
cd11948	54	cd11948, SH3_GRAP_N, N-terminal Src homology 3 dom	1e-07
cd12057	56	cd12057, SH3_CIN85_3, Third Src Homology 3 domain	1e-07
cd11779	57	cd11779, SH3_Irsp53_BAIAP2L, Src Homology 3 domain	1e-07
cd11839	58	cd11839, SH3_Intersectin_4, Fourth Src homology 3	1e-07
cd11864	58	cd11864, SH3_PEX13_eumet, Src Homology 3 domain of	1e-07
cd11772	53	cd11772, SH3_OSTF1, Src Homology 3 domain of metaz	2e-07
cd11896	55	cd11896, SH3_SNX33, Src Homology 3 domain of Sorti	2e-07
cd12046	53	cd12046, SH3_p67phox_C, C-terminal (or second) Src	2e-07
cd11987	55	cd11987, SH3_Intersectin1_1, First Src homology 3	3e-07
cd11869	54	cd11869, SH3_p40phox, Src Homology 3 domain of the	3e-07
cd11959	53	cd11959, SH3_Cortactin, Src homology 3 domain of C	3e-07
cd11841	54	cd11841, SH3_SH3YL1_like, Src homology 3 domain of	4e-07
cd11940	55	cd11940, SH3_ARHGEF5_19, Src homology 3 domain of	4e-07
cd11778	51	cd11778, SH3_Bzz1_2, Second Src Homology 3 domain	4e-07
cd11820	54	cd11820, SH3_STAM, Src homology 3 domain of Signal	5e-07
cd11971	59	cd11971, SH3_Abi1, Src homology 3 domain of Abl In	5e-07
cd12054	55	cd12054, SH3_CD2AP_2, Second Src Homology 3 domain	5e-07
cd11766	53	cd11766, SH3_Nck_2, Second Src Homology 3 domain o	5e-07
cd11828	53	cd11828, SH3_ARHGEF9_like, Src homology 3 domain o	6e-07
cd11812	52	cd11812, SH3_AHI-1, Src Homology 3 domain of Abels	6e-07
cd11804	52	cd11804, SH3_GRB2_like_N, N-terminal Src homology	6e-07
pfam00018	47	pfam00018, SH3_1, SH3 domain	7e-07
cd11782	53	cd11782, SH3_Sorbs_2, Second Src Homology 3 domain	7e-07
cd11998	56	cd11998, SH3_PACSIN1-2, Src homology 3 domain of P	7e-07
cd11874	53	cd11874, SH3_CD2AP-like_2, Second Src Homology 3 d	7e-07
cd12068	55	cd12068, SH3_MYO15B, Src Homology 3 domain of Myos	8e-07
cd12021	53	cd12021, SH3_p47phox_1, First or N-terminal Src ho	8e-07
cd11920	55	cd11920, SH3_Sorbs2_1, First Src Homology 3 domain	9e-07
cd11964	55	cd11964, SH3_STAM1, Src homology 3 domain of Signa	9e-07
cd11790	64	cd11790, SH3_Amphiphysin, Src Homology 3 domain of	9e-07
cd11842	55	cd11842, SH3_Ysc84p_like, Src homology 3 domain of	1e-06
cd12065	54	cd12065, SH3_GRAF2, Src Homology 3 domain of GTPas	1e-06
cd11989	52	cd11989, SH3_Intersectin1_2, Second Src homology 3	1e-06
cd11796	51	cd11796, SH3_DNMBP_N3, Third N-terminal Src homolo	1e-06
cd11919	55	cd11919, SH3_Sorbs1_1, First Src Homology 3 domain	1e-06
cd12053	56	cd12053, SH3_CD2AP_1, First Src Homology 3 domain	1e-06
cd11988	57	cd11988, SH3_Intersectin2_1, First Src homology 3	2e-06
cd11884	56	cd11884, SH3_MYO15, Src Homology 3 domain of Myosi	2e-06
cd11826	52	cd11826, SH3_Abi, Src homology 3 domain of Abl Int	2e-06
cd11961	53	cd11961, SH3_Abp1_fungi_C2, Second C-terminal Src	2e-06
cd11933	58	cd11933, SH3_Nebulin_C, C-terminal Src Homology 3	2e-06
cd11856	53	cd11856, SH3_p47phox_like, Src homology 3 domains	2e-06
cd11819	54	cd11819, SH3_Cortactin_like, Src homology 3 domain	2e-06
cd11870	53	cd11870, SH3_p67phox-like_C, C-terminal Src Homolo	2e-06
cd11825	54	cd11825, SH3_PLCgamma, Src homology 3 domain of Ph	2e-06
cd11805	53	cd11805, SH3_GRB2_like_C, C-terminal Src homology	3e-06
cd11990	52	cd11990, SH3_Intersectin2_2, Second Src homology 3	3e-06
cd11791	59	cd11791, SH3_UBASH3, Src homology 3 domain of Ubiq	3e-06
cd11997	56	cd11997, SH3_PACSIN3, Src homology 3 domain of Pro	3e-06
cd11985	53	cd11985, SH3_Stac2_C, C-terminal Src homology 3 do	3e-06
cd11817	50	cd11817, SH3_Eve1_4, Fourth Src homology 3 domain	3e-06
cd11916	59	cd11916, SH3_Sorbs1_3, Third (or C-terminal) Src H	4e-06
cd11806	53	cd11806, SH3_PRMT2, Src homology 3 domain of Prote	4e-06
cd11785	55	cd11785, SH3_SH3RF_C, C-terminal (Fourth) Src Homo	4e-06
cd11897	55	cd11897, SH3_SNX18, Src Homology 3 domain of Sorti	4e-06
cd11821	53	cd11821, SH3_ASAP, Src homology 3 domain of ArfGAP	4e-06
cd11824	53	cd11824, SH3_PSTPIP1, Src homology 3 domain of Pro	5e-06
cd12045	53	cd12045, SH3_SKAP2, Src Homology 3 domain of Src K	5e-06
cd11797	50	cd11797, SH3_DNMBP_N4, Fourth N-terminal Src homol	5e-06
cd11762	57	cd11762, SH3_FCHSD_2, Second Src Homology 3 domain	5e-06
cd12073	55	cd12073, SH3_HS1, Src homology 3 domain of Hematop	5e-06
cd11833	53	cd11833, SH3_Stac_1, First C-terminal Src homology	6e-06
cd11883	55	cd11883, SH3_Sdc25, Src Homology 3 domain of Sdc25	8e-06
cd12044	53	cd12044, SH3_SKAP1, Src Homology 3 domain of Src K	8e-06
cd12058	58	cd12058, SH3_MLK4, Src Homology 3 domain of Mixed	8e-06
cd11866	53	cd11866, SH3_SKAP1-like, Src Homology 3 domain of	9e-06
cd11999	56	cd11999, SH3_PACSIN_like, Src homology 3 domain of	9e-06
cd11991	52	cd11991, SH3_Intersectin1_3, Third Src homology 3	1e-05
cd11882	54	cd11882, SH3_GRAF-like, Src Homology 3 domain of G	1e-05
cd11947	52	cd11947, SH3_GRAP2_N, N-terminal Src homology 3 do	1e-05
cd11928	54	cd11928, SH3_SH3RF3_1, First Src Homology 3 domain	1e-05
cd11845	52	cd11845, SH3_Src_like, Src homology 3 domain of Sr	1e-05
cd11858	55	cd11858, SH3_Myosin-I_fungi, Src homology 3 domain	1e-05
cd11946	56	cd11946, SH3_GRB2_N, N-terminal Src homology 3 dom	2e-05
cd11929	54	cd11929, SH3_SH3RF2_1, First Src Homology 3 domain	2e-05
cd12066	55	cd12066, SH3_GRAF3, Src Homology 3 domain of GTPas	2e-05
cd11809	53	cd11809, SH3_srGAP, Src homology 3 domain of Slit-	2e-05
cd11858	55	cd11858, SH3_Myosin-I_fungi, Src homology 3 domain	3e-05
cd11938	55	cd11938, SH3_ARHGEF16_26, Src homology 3 domain of	3e-05
cd12055	53	cd12055, SH3_CIN85_2, Second Src Homology 3 domain	3e-05
cd11963	57	cd11963, SH3_STAM2, Src homology 3 domain of Signa	3e-05
cd11840	53	cd11840, SH3_Intersectin_5, Fifth Src homology 3 d	4e-05
cd11918	58	cd11918, SH3_Vinexin_3, Third (or C-terminal) Src	4e-05
cd11921	55	cd11921, SH3_Vinexin_1, First Src Homology 3 domai	4e-05
cd11767	56	cd11767, SH3_Nck_3, Third Src Homology 3 domain of	4e-05
cd12076	54	cd12076, SH3_Tks4_2, Second Src homology 3 domain	4e-05
cd11913	58	cd11913, SH3_BAIAP2L1, Src Homology 3 domain of Br	4e-05
cd11937	60	cd11937, SH3_UBASH3A, Src homology 3 domain of Ubi	5e-05
cd11969	55	cd11969, SH3_PLCgamma2, Src homology 3 domain of P	5e-05
cd11758	55	cd11758, SH3_CRK_N, N-terminal Src Homology 3 doma	6e-05
cd11986	53	cd11986, SH3_Stac3_1, First C-terminal Src homolog	6e-05
cd11894	56	cd11894, SH3_FCHSD2_2, Second Src Homology 3 domai	6e-05
cd11966	56	cd11966, SH3_ASAP2, Src homology 3 domain of ArfGA	6e-05
cd11805	53	cd11805, SH3_GRB2_like_C, C-terminal Src homology	7e-05
cd12013	61	cd12013, SH3_RIM-BP_3, Third Src homology 3 domain	7e-05
cd11844	56	cd11844, SH3_CAS, Src homology 3 domain of CAS (Cr	7e-05
cd11970	60	cd11970, SH3_PLCgamma1, Src homology 3 domain of P	8e-05
cd11877	53	cd11877, SH3_PIX, Src Homology 3 domain of Pak Int	9e-05
cd11941	57	cd11941, SH3_ARHGEF37_C2, Second C-terminal Src ho	9e-05
cd11823	53	cd11823, SH3_Nostrin, Src homology 3 domain of Nit	1e-04
cd11766	53	cd11766, SH3_Nck_2, Second Src Homology 3 domain o	1e-04
cd11796	51	cd11796, SH3_DNMBP_N3, Third N-terminal Src homolo	1e-04
cd11887	60	cd11887, SH3_Bbc1, Src Homology 3 domain of Bbc1 a	1e-04
cd11902	55	cd11902, SH3_Nck2_2, Second Src Homology 3 domain	1e-04
smart00326	56	smart00326, SH3, Src homology 3 domains	2e-04
cd11840	53	cd11840, SH3_Intersectin_5, Fifth Src homology 3 d	2e-04
cd11827	53	cd11827, SH3_MyoIe_If_like, Src homology 3 domain	2e-04
cd12064	56	cd12064, SH3_GRAF, Src Homology 3 domain of GTPase	2e-04
cd11952	56	cd11952, SH3_iASPP, Src Homology 3 (SH3) domain of	2e-04
cd11876	58	cd11876, SH3_MLK, Src Homology 3 domain of Mixed L	2e-04
cd11886	55	cd11886, SH3_BOI, Src Homology 3 domain of fungal	2e-04
cd12059	58	cd12059, SH3_MLK1-3, Src Homology 3 domain of Mixe	2e-04
cd12061	54	cd12061, SH3_betaPIX, Src Homology 3 domain of bet	3e-04
cd11837	53	cd11837, SH3_Intersectin_2, Second Src homology 3	3e-04
cd11829	52	cd11829, SH3_GAS7, Src homology 3 domain of Growth	3e-04
cd11762	57	cd11762, SH3_FCHSD_2, Second Src Homology 3 domain	3e-04
cd11833	53	cd11833, SH3_Stac_1, First C-terminal Src homology	3e-04
cd11986	53	cd11986, SH3_Stac3_1, First C-terminal Src homolog	3e-04
cd11975	62	cd11975, SH3_ARHGEF9, Src homology 3 domain of the	3e-04
cd12052	53	cd12052, SH3_CIN85_1, First Src Homology 3 domain	3e-04
cd11917	61	cd11917, SH3_Sorbs2_3, Third (or C-terminal) Src H	3e-04
cd12142	55	cd12142, SH3_D21-like, Src Homology 3 domain of SH	4e-04
cd12046	53	cd12046, SH3_p67phox_C, C-terminal (or second) Src	4e-04
cd11974	54	cd11974, SH3_ASEF2, Src homology 3 domain of APC-S	4e-04
cd11927	54	cd11927, SH3_SH3RF1_1, First Src Homology 3 domain	4e-04
cd11936	62	cd11936, SH3_UBASH3B, Src homology 3 domain of Ubi	4e-04
cd11960	54	cd11960, SH3_Abp1_eu, Src homology 3 domain of eum	4e-04
cd12047	53	cd12047, SH3_Noxa1_C, C-terminal Src Homology 3 do	4e-04
cd12060	58	cd12060, SH3_alphaPIX, Src Homology 3 domain of al	5e-04
cd11769	57	cd11769, SH3_CSK, Src Homology 3 domain of C-termi	5e-04
cd11849	53	cd11849, SH3_SPIN90, Src homology 3 domain of SH3	5e-04
cd11788	59	cd11788, SH3_RasGAP, Src Homology 3 domain of Ras	5e-04
cd11994	59	cd11994, SH3_Intersectin2_4, Fourth Src homology 3	5e-04
cd12008	56	cd12008, SH3_Src, Src homology 3 domain of Src Pro	6e-04
cd11801	55	cd11801, SH3_JIP1_like, Src homology 3 domain of J	6e-04
cd11847	58	cd11847, SH3_Brk, Src homology 3 domain of Brk (Br	6e-04
cd11973	73	cd11973, SH3_ASEF, Src homology 3 domain of APC-St	6e-04
cd11877	53	cd11877, SH3_PIX, Src Homology 3 domain of Pak Int	7e-04
cd11901	55	cd11901, SH3_Nck1_2, Second Src Homology 3 domain	7e-04
cd11949	53	cd11949, SH3_GRB2_C, C-terminal Src homology 3 dom	8e-04
cd11783	55	cd11783, SH3_SH3RF_3, Third Src Homology 3 domain	8e-04
cd12061	54	cd12061, SH3_betaPIX, Src Homology 3 domain of bet	9e-04
cd11845	52	cd11845, SH3_Src_like, Src homology 3 domain of Sr	9e-04
cd12007	58	cd12007, SH3_Yes, Src homology 3 domain of Yes Pro	9e-04
cd11992	52	cd11992, SH3_Intersectin2_3, Third Src homology 3	0.001
cd11830	54	cd11830, SH3_VAV_2, C-terminal (or second) Src hom	0.001
cd11793	55	cd11793, SH3_ephexin1_like, Src homology 3 domain	0.001
pfam07653	53	pfam07653, SH3_2, Variant SH3 domain	0.001
cd11914	59	cd11914, SH3_BAIAP2L2, Src Homology 3 domain of Br	0.001
cd11873	53	cd11873, SH3_CD2AP-like_1, First Src Homology 3 do	0.001
cd11990	52	cd11990, SH3_Intersectin2_2, Second Src homology 3	0.001
cd11902	55	cd11902, SH3_Nck2_2, Second Src Homology 3 domain	0.001
cd11927	54	cd11927, SH3_SH3RF1_1, First Src Homology 3 domain	0.001
cd12003	62	cd12003, SH3_EFS, Src homology 3 domain of CAS (Cr	0.001
cd12016	54	cd12016, SH3_Tks_2, Second Src homology 3 domain o	0.001
cd11956	55	cd11956, SH3_srGAP4, Src homology 3 domain of Slit	0.001
cd11904	57	cd11904, SH3_Nck1_3, Third Src Homology 3 domain o	0.001
cd11871	54	cd11871, SH3_p67phox_N, N-terminal (or first) Src	0.001
cd11800	57	cd11800, SH3_DNMBP_C2_like, Second C-terminal Src	0.001
cd11763	55	cd11763, SH3_SNX9_like, Src Homology 3 domain of S	0.002
cd11978	56	cd11978, SH3_VAV3_2, C-terminal (or second) Src ho	0.002
cd11839	58	cd11839, SH3_Intersectin_4, Fourth Src homology 3	0.002
cd12021	53	cd12021, SH3_p47phox_1, First or N-terminal Src ho	0.002
cd11985	53	cd11985, SH3_Stac2_C, C-terminal Src homology 3 do	0.002
cd11928	54	cd11928, SH3_SH3RF3_1, First Src Homology 3 domain	0.002
cd11887	60	cd11887, SH3_Bbc1, Src Homology 3 domain of Bbc1 a	0.002
cd11901	55	cd11901, SH3_Nck1_2, Second Src Homology 3 domain	0.002
cd12017	53	cd12017, SH3_Tks_3, Third Src homology 3 domain of	0.002
cd11965	57	cd11965, SH3_ASAP1, Src homology 3 domain of ArfGA	0.002
cd11787	53	cd11787, SH3_SH3RF_2, Second Src Homology 3 domain	0.002
cd11945	61	cd11945, SH3_Endophilin_B1, Src homology 3 domain	0.002
cd11925	57	cd11925, SH3_SH3RF3_3, Third Src Homology 3 domain	0.002
cd11875	55	cd11875, SH3_CD2AP-like_3, Third Src Homology 3 do	0.003
cd11803	55	cd11803, SH3_Endophilin_A, Src homology 3 domain o	0.003
cd11951	53	cd11951, SH3_GRAP_C, C-terminal Src homology 3 dom	0.003
cd12065	54	cd12065, SH3_GRAF2, Src Homology 3 domain of GTPas	0.003
cd11821	53	cd11821, SH3_ASAP, Src homology 3 domain of ArfGAP	0.003
cd11776	72	cd11776, SH3_PI3K_p85, Src Homology 3 domain of th	0.003
cd12077	54	cd12077, SH3_Tks5_2, Second Src homology 3 domain	0.003
cd11761	57	cd11761, SH3_FCHSD_1, First Src Homology 3 domain	0.003
cd12002	57	cd12002, SH3_NEDD9, Src homology 3 domain of CAS (	0.003
cd11784	55	cd11784, SH3_SH3RF2_3, Third Src Homology 3 domain	0.003
cd11832	50	cd11832, SH3_Shank, Src homology 3 domain of SH3 a	0.003
cd11939	55	cd11939, SH3_ephexin1, Src homology 3 domain of th	0.003
cd11976	54	cd11976, SH3_VAV1_2, C-terminal (or second) Src ho	0.004
cd11995	54	cd11995, SH3_Intersectin1_5, Fifth Src homology 3	0.004
cd11847	58	cd11847, SH3_Brk, Src homology 3 domain of Brk (Br	0.004
cd12004	56	cd12004, SH3_Lyn, Src homology 3 domain of Lyn Pro	0.004
cd11815	52	cd11815, SH3_Eve1_2, Second Src homology 3 domain	0.004

>gnl|CDD|212770 cd11836, SH3_Intersectin_1, First Src homology 3 domain (or SH3A) of Intersectin

 Score =  104 bits (262), Expect = 1e-28
 Identities = 38/54 (70%), Positives = 45/54 (83%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           +YRA+Y F +RN DE+SFQPGDII V   Q AEPGWLAGEL+G+TGWFP +YVE
Sbjct: 1   KYRALYAFEARNPDEISFQPGDIIQVDESQVAEPGWLAGELKGKTGWFPANYVE 54

Intersectins (ITSNs) are adaptor proteins that function in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. They are essential for initiating clathrin-coated pit formation. They bind to many proteins through their multidomain structure and facilitate the assembly of multimeric complexes. Vertebrates contain two ITSN proteins, ITSN1 and ITSN2, which exist in alternatively spliced short and long isoforms. The short isoforms contain two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoforms, in addition, contain RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. ITSN1 and ITSN2 are both widely expressed, with variations depending on tissue type and stage of development. The first SH3 domain (or SH3A) of ITSN1 has been shown to bind many proteins including Sos1, dynamin1/2, CIN85, c-Cbl, PI3K-C2, SHIP2, N-WASP, and CdGAP, among others. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212772 cd11838, SH3_Intersectin_3, Third Src homology 3 domain (or SH3C) of Intersectin

 Score = 82.1 bits (203), Expect = 4e-20
 Identities = 32/45 (71%), Positives = 36/45 (80%)

Query: 119 YYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGTIGDRTARF 163
            YIA YPY+S EPGDLTFN  +VI VTKK+ +WWTGTIGDRT  F
Sbjct: 1   EYIALYPYESNEPGDLTFNAGDVILVTKKDGEWWTGTIGDRTGIF 45

Intersectins (ITSNs) are adaptor proteins that function in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. They are essential for initiating clathrin-coated pit formation. They bind to many proteins through their multidomain structure and facilitate the assembly of multimeric complexes. Vertebrates contain two ITSN proteins, ITSN1 and ITSN2, which exist in alternatively spliced short and long isoforms. The short isoforms contain two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoforms, in addition, contain RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. ITSN1 and ITSN2 are both widely expressed, with variations depending on tissue type and stage of development. The third SH3 domain (or SH3C) of ITSN1 has been shown to bind many proteins including dynamin1/2, CIN85, c-Cbl, SHIP2, Reps1, synaptojanin-1, and WNK, among others. The SH3C of ITSN2 has been shown to bind the K15 protein of Kaposi's sarcoma-associated herpesvirus. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 52

>gnl|CDD|212921 cd11988, SH3_Intersectin2_1, First Src homology 3 domain (or SH3A) of Intersectin-2

 Score = 78.0 bits (192), Expect = 1e-18
 Identities = 31/53 (58%), Positives = 36/53 (67%)

Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           YRA+Y F +RN DE+SF  GDII V  K   EPGWL G  +G  GWFP +YVE
Sbjct: 4   YRALYPFEARNHDEMSFNAGDIIQVDEKTVGEPGWLYGSFQGNFGWFPCNYVE 56

Intersectin-2 (ITSN2) is an adaptor protein that functions in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. It plays a role in clathrin-coated pit (CCP) formation. It binds to many proteins through its multidomain structure and facilitate the assembly of multimeric complexes. ITSN2 also functions as a specific GEF for Cdc42 activation in epithelial morphogenesis, and is required in mitotic spindle orientation. It exists in alternatively spliced short and long isoforms. The short isoform contains two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoform, in addition, contains RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. The first SH3 domain (or SH3A) of ITSN2 is expected to bind many protein partners, similar to ITSN1 which has been shown to bind Sos1, dynamin1/2, CIN85, c-Cbl, PI3K-C2, SHIP2, N-WASP, and CdGAP, among others. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 57

>gnl|CDD|212920 cd11987, SH3_Intersectin1_1, First Src homology 3 domain (or SH3A) of Intersectin-1

 Score = 77.7 bits (191), Expect = 2e-18
 Identities = 32/53 (60%), Positives = 41/53 (77%)

Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           YRA+Y F +R+ DE++ QPGDI+MV   Q  EPGWL GEL+G+TGWFP +Y E
Sbjct: 2   YRALYPFEARSHDEITIQPGDIVMVDESQTGEPGWLGGELKGKTGWFPANYAE 54

Intersectin-1 (ITSN1) is an adaptor protein that functions in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. It plays a role in clathrin-coated pit (CCP) formation. It binds to many proteins through its multidomain structure and facilitate the assembly of multimeric complexes. ITSN1 localizes in membranous organelles, CCPs, the Golgi complex, and may be involved in the cell membrane trafficking system. It exists in alternatively spliced short and long isoforms. The short isoform contains two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoform, in addition, contains RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. The first SH3 domain (or SH3A) of ITSN1 has been shown to bind many proteins including Sos1, dynamin1/2, CIN85, c-Cbl, PI3K-C2, SHIP2, N-WASP, and CdGAP, among others. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|214620 smart00326, SH3, Src homology 3 domains

 Score = 70.3 bits (173), Expect = 1e-15
 Identities = 26/58 (44%), Positives = 41/58 (70%), Gaps = 3/58 (5%)

Query: 168 EYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL-RGQTGWFPESYVE 224
           E  + RA+Y++ +++ DELSF+ GDII V ++++ + GW  G L RG+ G FP +YVE
Sbjct: 1   EGPQVRALYDYTAQDPDELSFKKGDIITV-LEKS-DDGWWKGRLGRGKEGLFPSNYVE 56

Src homology 3 (SH3) domains bind to target proteins through sequences containing proline and hydrophobic amino acids. Pro-containing polypeptides may bind to SH3 domains in 2 different binding orientations. Length = 56

>gnl|CDD|212925 cd11992, SH3_Intersectin2_3, Third Src homology 3 domain (or SH3C) of Intersectin-2

 Score = 68.1 bits (166), Expect = 5e-15
 Identities = 29/44 (65%), Positives = 35/44 (79%)

Query: 120 YIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGTIGDRTARF 163
           YIA YPY S+EPGDLTFN+ E I VT+K+ +WWTG+I DRT  F
Sbjct: 2   YIALYPYSSSEPGDLTFNEGEEILVTQKDGEWWTGSIEDRTGIF 45

Intersectin-2 (ITSN2) is an adaptor protein that functions in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. It plays a role in clathrin-coated pit (CCP) formation. It binds to many proteins through its multidomain structure and facilitate the assembly of multimeric complexes. ITSN2 also functions as a specific GEF for Cdc42 activation in epithelial morphogenesis, and is required in mitotic spindle orientation. It exists in alternatively spliced short and long isoforms. The short isoform contains two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoform, in addition, contains RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. The third SH3 domain (SH3C) of ITSN2 has been shown to bind the K15 protein of Kaposi's sarcoma-associated herpesvirus. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 52

>gnl|CDD|212924 cd11991, SH3_Intersectin1_3, Third Src homology 3 domain (or SH3C) of Intersectin-1

 Score = 67.3 bits (164), Expect = 8e-15
 Identities = 28/44 (63%), Positives = 34/44 (77%)

Query: 120 YIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGTIGDRTARF 163
           Y+A Y Y+S E GDLTF Q +VI VTKK+ DWWTGT+GD+T  F
Sbjct: 2   YVAMYTYESNEQGDLTFQQGDVILVTKKDGDWWTGTVGDKTGVF 45

Intersectin-1 (ITSN1) is an adaptor protein that functions in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. It plays a role in clathrin-coated pit (CCP) formation. It binds to many proteins through its multidomain structure and facilitate the assembly of multimeric complexes. ITSN1 localizes in membranous organelles, CCPs, the Golgi complex, and may be involved in the cell membrane trafficking system. It exists in alternatively spliced short and long isoforms. The short isoform contains two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoform, in addition, contains RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. The third SH3 domain (or SH3C) of ITSN1 has been shown to bind many proteins including dynamin1/2, CIN85, c-Cbl, SHIP2, Reps1, synaptojanin-1, and WNK, among others. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 52

>gnl|CDD|212810 cd11877, SH3_PIX, Src Homology 3 domain of Pak Interactive eXchange factors

 Score = 63.5 bits (155), Expect = 2e-13
 Identities = 28/54 (51%), Positives = 32/54 (59%), Gaps = 2/54 (3%)

Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
            RA + F   N DELSF  GDII   V Q  E GW  G L G+TGWFP +YV+ 
Sbjct: 2   VRAKFNFEGTNEDELSFDKGDIIT--VTQVVEGGWWEGTLNGKTGWFPSNYVKE 53

PIX proteins are Rho guanine nucleotide exchange factors (GEFs), which activate small GTPases by exchanging bound GDP for free GTP. They act as GEFs for both Cdc42 and Rac 1, and have been implicated in cell motility, adhesion, neurite outgrowth, and cell polarity. Vertebrates contain two proteins from the PIX subfamily, alpha-PIX and beta-PIX. Alpha-PIX, also called ARHGEF6, is localized in dendritic spines where it regulates spine morphogenesis. Mutations in the ARHGEF6 gene cause X-linked intellectual disability in humans. Beta-PIX play roles in regulating neuroendocrine exocytosis, focal adhesion maturation, cell migration, synaptic vesicle localization, and insulin secretion. PIX proteins contain an N-terminal SH3 domain followed by RhoGEF (also called Dbl-homologous or DH) and Pleckstrin Homology (PH) domains, and a C-terminal leucine-zipper domain for dimerization. The SH3 domain of PIX binds to an atypical PxxxPR motif in p21-activated kinases (PAKs) with high affinity. The binding of PAKs to PIX facilitate the localization of PAKs to focal complexes and also localizes PAKs to PIX targets Cdc43 and Rac, leading to the activation of PAKs. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212757 cd11823, SH3_Nostrin, Src homology 3 domain of Nitric Oxide Synthase TRaffic INducer

 Score = 63.5 bits (155), Expect = 2e-13
 Identities = 28/54 (51%), Positives = 35/54 (64%), Gaps = 2/54 (3%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           R +A+Y + +   DELS QPGDII V  KQ  + GW  GEL G+ G FP +YVE
Sbjct: 1   RCKALYSYTANREDELSLQPGDIIEVHEKQ--DDGWWLGELNGKKGIFPATYVE 52

Nostrin is expressed in endothelial and epithelial cells and is involved in the regulation, trafficking and targeting of endothelial NOS (eNOS). It facilitates the endocytosis of eNOS by coordinating the functions of dynamin and the Wiskott-Aldrich syndrome protein (WASP). Increased expression of Nostrin may be correlated to preeclampsia. Nostrin contains an N-terminal F-BAR domain and a C-terminal SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212774 cd11840, SH3_Intersectin_5, Fifth Src homology 3 domain (or SH3E) of Intersectin

 Score = 62.8 bits (153), Expect = 4e-13
 Identities = 29/53 (54%), Positives = 36/53 (67%), Gaps = 2/53 (3%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
            A++ + ++N DELSFQ GDII V  K   +P W  GEL GQTG FP +YVEP
Sbjct: 3   IALFPYTAQNEDELSFQKGDIINVLSKD--DPDWWRGELNGQTGLFPSNYVEP 53

Intersectins (ITSNs) are adaptor proteins that function in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. They are essential for initiating clathrin-coated pit formation. They bind to many proteins through their multidomain structure and facilitate the assembly of multimeric complexes. Vertebrates contain two ITSN proteins, ITSN1 and ITSN2, which exist in alternatively spliced short and long isoforms. The short isoforms contain two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoforms, in addition, contain RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. ITSN1 and ITSN2 are both widely expressed, with variations depending on tissue type and stage of development. The fifth SH3 domain (or SH3E) of ITSN1 has been shown to bind many protein partners including SGIP1, Sos1, dynamin1/2, CIN85, c-Cbl, SHIP2, N-WASP, and synaptojanin-1, among others. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212815 cd11882, SH3_GRAF-like, Src Homology 3 domain of GTPase Regulator Associated with Focal adhesion kinase and similar proteins

 Score = 62.3 bits (152), Expect = 7e-13
 Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
           R RA+Y   + +  ELSF+PG II   V+ + EPGWL G L G+TG  PE+YVE 
Sbjct: 1   RARALYACKAEDESELSFEPGQII-TNVQPSDEPGWLEGTLNGRTGLIPENYVEF 54

This subfamily is composed of Rho GTPase activating proteins (GAPs) with similarity to GRAF. Members contain an N-terminal BAR domain, followed by a Pleckstrin homology (PH) domain, a Rho GAP domain, and a C-terminal SH3 domain. Although vertebrates harbor four Rho GAPs in the GRAF subfamily including GRAF, GRAF2, GRAF3, and Oligophrenin-1 (OPHN1), only three are included in this model. OPHN1 contains the BAR, PH and GAP domains, but not the C-terminal SH3 domain. GRAF and GRAF2 show GAP activity towards RhoA and Cdc42. GRAF influences Rho-mediated cytoskeletal rearrangements and binds focal adhesion kinase. GRAF2 regulates caspase-activated p21-activated protein kinase-2. The SH3 domain of GRAF and GRAF2 binds PKNbeta, a target of the small GTPase Rho. SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies. Length = 54

>gnl|CDD|212690 cd00174, SH3, Src Homology 3 domain superfamily

 Score = 60.9 bits (149), Expect = 2e-12
 Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 3/53 (5%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL-RGQTGWFPESY 222
             RA+Y++ +++ DELSF+ GDII   V +  + GW  GEL  G+ G FP +Y
Sbjct: 1   YARALYDYEAQDDDELSFKKGDIIT--VLEKDDDGWWEGELNGGREGLFPANY 51

Src Homology 3 (SH3) domains are protein interaction domains that bind proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. Thus, they are referred to as proline-recognition domains (PRDs). SH3 domains are less selective and show more diverse specificity compared to other PRDs. They have been shown to bind peptide sequences that lack the PxxP motif; examples include the PxxDY motif of Eps8 and the RKxxYxxY sequence in SKAP55. SH3 domain containing proteins play versatile and diverse roles in the cell, including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies, among others. Many members of this superfamily are adaptor proteins that associate with a number of protein partners, facilitating complex formation and signal transduction. Length = 51

>gnl|CDD|212817 cd11884, SH3_MYO15, Src Homology 3 domain of Myosin XV

 Score = 58.1 bits (141), Expect = 2e-11
 Identities = 22/54 (40%), Positives = 36/54 (66%), Gaps = 1/54 (1%)

Query: 173 RAIYEFVSRNGDELSFQPGDII-MVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
            A+  +++R+   LSF  GD+I ++P +   +PGWL G L G++G FP+ YV+P
Sbjct: 3   VAVRAYITRDQTLLSFHKGDVIKLLPKEGPLDPGWLFGTLDGRSGAFPKEYVQP 56

This subfamily is composed of proteins with similarity to Myosin XVa. Myosin XVa is an unconventional myosin that is critical for the normal growth of mechanosensory stereocilia of inner ear hair cells. Mutations in the myosin XVa gene are associated with nonsyndromic hearing loss. Myosin XVa contains a unique N-terminal extension followed by a motor domain, light chain-binding IQ motifs, and a tail consisting of a pair of MyTH4-FERM tandems separated by a SH3 domain, and a PDZ domain. SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies. Length = 56

>gnl|CDD|212770 cd11836, SH3_Intersectin_1, First Src homology 3 domain (or SH3A) of Intersectin

 Score = 57.8 bits (140), Expect = 3e-11
 Identities = 21/29 (72%), Positives = 24/29 (82%)

Query: 286 VPVKQNAEPGWLAGELRGQTGWFPESYVE 314
           V   Q AEPGWLAGEL+G+TGWFP +YVE
Sbjct: 26  VDESQVAEPGWLAGELKGKTGWFPANYVE 54

Intersectins (ITSNs) are adaptor proteins that function in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. They are essential for initiating clathrin-coated pit formation. They bind to many proteins through their multidomain structure and facilitate the assembly of multimeric complexes. Vertebrates contain two ITSN proteins, ITSN1 and ITSN2, which exist in alternatively spliced short and long isoforms. The short isoforms contain two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoforms, in addition, contain RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. ITSN1 and ITSN2 are both widely expressed, with variations depending on tissue type and stage of development. The first SH3 domain (or SH3A) of ITSN1 has been shown to bind many proteins including Sos1, dynamin1/2, CIN85, c-Cbl, PI3K-C2, SHIP2, N-WASP, and CdGAP, among others. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212808 cd11875, SH3_CD2AP-like_3, Third Src Homology 3 domain (SH3C) of CD2-associated protein and similar proteins

 Score = 57.4 bits (139), Expect = 4e-11
 Identities = 21/55 (38%), Positives = 36/55 (65%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
           + R ++++ + N DEL+ + GDI+ +  K   + GW  GEL G+ G FP+++VEP
Sbjct: 1   KARVLFDYEAENEDELTLREGDIVTILSKDCEDKGWWKGELNGKRGVFPDNFVEP 55

This subfamily is composed of the third SH3 domain (SH3C) of CD2AP, CIN85 (Cbl-interacting protein of 85 kDa), and similar domains. CD2AP and CIN85 are adaptor proteins that bind to protein partners and assemble complexes that have been implicated in T cell activation, kidney function, and apoptosis of neuronal cells. They also associate with endocytic proteins, actin cytoskeleton components, and other adaptor proteins involved in receptor tyrosine kinase (RTK) signaling. CD2AP and the main isoform of CIN85 contain three SH3 domains, a proline-rich region, and a C-terminal coiled-coil domain. All of these domains enable CD2AP and CIN85 to bind various protein partners and assemble complexes that have been implicated in many different functions. SH3C of both proteins have been shown to bind to ubiquitin. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212697 cd11763, SH3_SNX9_like, Src Homology 3 domain of Sorting Nexin 9 and similar proteins

 Score = 57.0 bits (138), Expect = 5e-11
 Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 2/56 (3%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE-LRGQTGWFPESYVEP 225
           + RA+Y+F S+   ELS + G+++ +  +Q+   GWL G   RG+ G FP SYVE 
Sbjct: 1   KVRALYDFDSQPSGELSLRAGEVLTI-TRQDVGDGWLEGRNSRGEVGLFPSSYVEI 55

Sorting nexins (SNXs) are Phox homology (PX) domain containing proteins that are involved in regulating membrane traffic and protein sorting in the endosomal system. SNXs differ from each other in their lipid-binding specificity, subcellular localization and specific function in the endocytic pathway. This subfamily consists of SH3 domain containing SNXs including SNX9, SNX18, SNX33, and similar proteins. SNX9 is localized to plasma membrane endocytic sites and acts primarily in clathrin-mediated endocytosis, while SNX18 is localized to peripheral endosomal structures, and acts in a trafficking pathway that is clathrin-independent but relies on AP-1 and PACS1. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|213018 cd12142, SH3_D21-like, Src Homology 3 domain of SH3 domain-containing protein 21 (SH3D21) and similar proteins

 Score = 56.3 bits (136), Expect = 9e-11
 Identities = 20/54 (37%), Positives = 34/54 (62%)

Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
            R ++++     DEL+ + GD+I V  K+  + GW  GEL G+ G+FP+++V P
Sbjct: 2   CRVLFDYNPVAPDELALKKGDVIEVISKETEDEGWWEGELNGRRGFFPDNFVMP 55

N-terminal SH3 domain of the uncharacterized protein SH3 domain-containing protein 21, and similar uncharacterized domains, it belongs to the CD2AP-like_3 subfamily of proteins. The CD2AP-like_3 subfamily is composed of the third SH3 domain (SH3C) of CD2AP, CIN85 (Cbl-interacting protein of 85 kDa), and similar domains. CD2AP and CIN85 are adaptor proteins that bind to protein partners and assemble complexes that have been implicated in T cell activation, kidney function, and apoptosis of neuronal cells. They also associate with endocytic proteins, actin cytoskeleton components, and other adaptor proteins involved in receptor tyrosine kinase (RTK) signaling. CD2AP and the main isoform of CIN85 contain three SH3 domains, a proline-rich region, and a C-terminal coiled-coil domain. All of these domains enable CD2AP and CIN85 to bind various protein partners and assemble complexes that have been implicated in many different functions. SH3C of both proteins have been shown to bind to ubiquitin. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212705 cd11771, SH3_Pex13p_fungal, Src Homology 3 domain of fungal peroxisomal membrane protein Pex13p

 Score = 55.7 bits (135), Expect = 1e-10
 Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 5/57 (8%)

Query: 173 RAIYEFVSRN-GDELSFQPGDIIMVPVK---QNAEPGWLAGELR-GQTGWFPESYVE 224
           RA+Y+F   N   ELS + GDI+ V  K      +  W  G  R G+ GWFP +YVE
Sbjct: 3   RALYDFTPENPEMELSLKKGDIVAVLSKTDPLGRDSEWWKGRTRDGRIGWFPSNYVE 59

Pex13p, located in the peroxisomal membrane, contains two transmembrane regions and a C-terminal SH3 domain. It binds to the peroxisomal targeting type I (PTS1) receptor Pex5p and the docking factor Pex14p through its SH3 domain. It is essential for both PTS1 and PTS2 protein import pathways into the peroxisomal matrix. Pex13p binds Pex14p, which contains a PxxP motif, in a classical fashion to the proline-rich ligand binding site of its SH3 domain. It binds the WxxxF/Y motif of Pex5p in a novel site that does not compete with Pex14p binding. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 60

>gnl|CDD|212760 cd11826, SH3_Abi, Src homology 3 domain of Abl Interactor proteins

 Score = 55.4 bits (134), Expect = 2e-10
 Identities = 27/52 (51%), Positives = 34/52 (65%), Gaps = 2/52 (3%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
            A+Y++ +   DELSFQ GDII V  K+N + GW  G L G TG FP +YVE
Sbjct: 3   VALYDYTADKDDELSFQEGDIIYV-TKKNDD-GWYEGVLNGVTGLFPGNYVE 52

Abl interactor (Abi) proteins are adaptor proteins serving as binding partners and substrates of Abl tyrosine kinases. They are involved in regulating actin cytoskeletal reorganization and play important roles in membrane-ruffling, endocytosis, cell motility, and cell migration. They localize to sites of actin polymerization in epithelial adherens junction and immune synapses, as well as to the leading edge of lamellipodia. Vertebrates contain two Abi proteins, Abi1 and Abi2. Abi1 displays a wide expression pattern while Abi2 is highly expressed in the eye and brain. Abi proteins contain a homeobox homology domain, a proline-rich region, and a SH3 domain. The SH3 domain of Abi binds to a PxxP motif in Abl. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 52

>gnl|CDD|212706 cd11772, SH3_OSTF1, Src Homology 3 domain of metazoan osteoclast stimulating factor 1

 Score = 55.4 bits (134), Expect = 2e-10
 Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 2/54 (3%)

Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
           +RA+Y++ +++ DELSF+ GD++ +  K +  P W      G+TG  P +YVE 
Sbjct: 2   FRALYDYEAQHPDELSFEEGDLLYISDKSD--PNWWKATCGGKTGLIPSNYVEE 53

OSTF1, also named OSF or SH3P2, is a signaling protein containing SH3 and ankyrin-repeat domains. It acts through a Src-related pathway to enhance the formation of osteoclasts and bone resorption. It also acts as a negative regulator of cell motility. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212739 cd11805, SH3_GRB2_like_C, C-terminal Src homology 3 domain of Growth factor receptor-bound protein 2 (GRB2) and related proteins

 Score = 54.9 bits (133), Expect = 2e-10
 Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 2/55 (3%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
           R +A+Y+F  +   EL F+ GDII V    +++P W  GELRG+ G FP +YV+P
Sbjct: 1   RVQALYDFNPQEPGELEFRRGDIITV--LDSSDPDWWKGELRGRVGIFPANYVQP 53

This family includes the adaptor protein GRB2 and related proteins including Drosophila melanogaster Downstream of receptor kinase (DRK), Caenorhabditis elegans Sex muscle abnormal protein 5 (Sem-5), GRB2-related adaptor protein (GRAP), GRAP2, and similar proteins. Family members contain an N-terminal SH3 domain, a central SH2 domain, and a C-terminal SH3 domain. GRB2/Sem-5/DRK is a critical signaling molecule that regulates the Ras pathway by linking tyrosine kinases to the Ras guanine nucleotide releasing protein Sos (son of sevenless), which converts Ras to the active GTP-bound state. GRAP2 plays an important role in T cell receptor (TCR) signaling by promoting the formation of the SLP-76:LAT complex, which couples the TCR to the Ras pathway. GRAP acts as a negative regulator of T cell receptor (TCR)-induced lymphocyte proliferation by downregulating the signaling to the Ras/ERK pathway. The C-terminal SH3 domains (SH3c) of GRB2 and GRAP2 have been shown to bind to classical PxxP motif ligands, as well as to non-classical motifs. GRB2 SH3c binds Gab2 (Grb2-associated binder 2) through epitopes containing RxxK motifs, while the SH3c of GRAP2 binds to the phosphatase-like protein HD-PTP via a RxxxxK motif. SH3 domains are protein interaction domains that typically bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212989 cd12056, SH3_CD2AP_3, Third Src Homology 3 domain (SH3C) of CD2-associated protein

 Score = 55.2 bits (133), Expect = 2e-10
 Identities = 22/51 (43%), Positives = 34/51 (66%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYV 223
           +A++ +   N DEL F+ G+II++  K   EPGW  GEL G+ G FP+++V
Sbjct: 5   KALFHYEGTNEDELDFKEGEIILIISKDTGEPGWWKGELNGKEGVFPDNFV 55

CD2AP, also called CMS (Cas ligand with Multiple SH3 domains) or METS1 (Mesenchyme-to-Epithelium Transition protein with SH3 domains), is a cytosolic adaptor protein that plays a role in regulating the cytoskeleton. It is critical in cell-to-cell union necessary for kidney function. It also stabilizes the contact between a T cell and antigen-presenting cells. It is primarily expressed in podocytes at the cytoplasmic face of the slit diaphragm and serves as a linker anchoring podocin and nephrin to the actin cytoskeleton. CD2AP contains three SH3 domains, a proline-rich region, and a C-terminal coiled-coil domain. All of these domains enable CD2AP to bind various protein partners and assemble complexes that have been implicated in many different functions. This alignment model represents the third SH3 domain (SH3C) of CD2AP. SH3C has been shown to bind ubiquitin. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 57

>gnl|CDD|212761 cd11827, SH3_MyoIe_If_like, Src homology 3 domain of Myosins Ie, If, and similar proteins

 Score = 54.7 bits (132), Expect = 3e-10
 Identities = 24/54 (44%), Positives = 37/54 (68%), Gaps = 2/54 (3%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           + +A+Y + +++ DELSF  GDII + +K++   GW  G LRG+ G FP +YVE
Sbjct: 1   QCKALYAYDAQDTDELSFNEGDIIEI-LKEDPS-GWWTGRLRGKEGLFPGNYVE 52

Myosins Ie (MyoIe) and If (MyoIf) are nonmuscle, unconventional, long tailed, class I myosins containing an N-terminal motor domain and a myosin tail with TH1, TH2, and SH3 domains. MyoIe interacts with the endocytic proteins, dynamin and synaptojanin-1, through its SH3 domain; it may play a role in clathrin-dependent endocytosis. In the kidney, MyoIe is critical for podocyte function and normal glomerular filtration. Mutations in MyoIe is associated with focal segmental glomerulosclerosis, a disease characterized by massive proteinuria and progression to end-stage kidney disease. MyoIf is predominantly expressed in the immune system; it plays a role in immune cell motility and innate immunity. Mutations in MyoIf may be associated with the loss of hearing. The MyoIf gene has also been found to be fused to the MLL (Mixed lineage leukemia) gene in infant acute myeloid leukemias (AML). SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212909 cd11976, SH3_VAV1_2, C-terminal (or second) Src homology 3 domain of VAV1 protein

 Score = 54.9 bits (132), Expect = 3e-10
 Identities = 23/52 (44%), Positives = 35/52 (67%), Gaps = 1/52 (1%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           +A Y+F +R+  ELS + GDII + + +  + GW  GE+ G+ GWFP +YVE
Sbjct: 3   KARYDFCARDRSELSLKEGDIIKI-LNKKGQQGWWRGEIYGRVGWFPANYVE 53

VAV1 is expressed predominantly in the hematopoietic system and it plays an important role in the development and activation of B and T cells. It is activated by tyrosine phosphorylation to function as a guanine nucleotide exchange factor (GEF) for Rho GTPases following cell surface receptor activation, triggering various effects such as cytoskeletal reorganization, transcription regulation, cell cycle progression, and calcium mobilization. It also serves as a scaffold protein and has been shown to interact with Ku70, Socs1, Janus kinase 2, SIAH2, S100B, Abl gene, ZAP-70, SLP76, and Syk, among others. VAV proteins contain several domains that enable their function: N-terminal calponin homology (CH), acidic, RhoGEF (also called Dbl-homologous or DH), Pleckstrin Homology (PH), C1 (zinc finger), SH2, and two SH3 domains. The C-terminal SH3 domain of Vav1 interacts with a wide variety of proteins including cytoskeletal regulators (zyxin), RNA-binding proteins (Sam68), transcriptional regulators, viral proteins, and dynamin 2. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212715 cd11781, SH3_Sorbs_1, First Src Homology 3 domain of Sorbin and SH3 domain containing (Sorbs) proteins and similar domains

 Score = 54.7 bits (132), Expect = 3e-10
 Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 6/55 (10%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMV--PVKQNAEPGWLAGELRGQTGWFPESYVEP 225
           RA+Y F +++  ELS + GDII +   + +N    W  GE  G+ G FP SYVE 
Sbjct: 3   RALYPFKAQSAKELSLKKGDIIYIRRQIDKN----WYEGEHNGRVGIFPASYVEI 53

This family, also called the vinexin family, is composed predominantly of adaptor proteins containing one sorbin homology (SoHo) and three SH3 domains. Members include the first SH3 domains of Sorbs1 (or ponsin), Sorbs2 (or ArgBP2), Vinexin (or Sorbs3), and similar domains. They are involved in the regulation of cytoskeletal organization, cell adhesion, and growth factor signaling. Members of this family bind multiple partners including signaling molecules like c-Abl, c-Arg, Sos, and c-Cbl, as well as cytoskeletal molecules such as vinculin and afadin. They may have overlapping functions. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212777 cd11843, SH3_PACSIN, Src homology 3 domain of Protein kinase C and Casein kinase Substrate in Neurons (PACSIN) proteins

 Score = 53.6 bits (129), Expect = 7e-10
 Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 1/54 (1%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
             RA+Y++  +  DELSF+ GDI+   +++  E GW  G L G+ G +P +YVE
Sbjct: 1   PVRALYDYEGQESDELSFKAGDILT-KLEEEDEQGWCKGRLDGRVGLYPANYVE 53

PACSINs, also called Synaptic dynamin-associated proteins (Syndapins), act as regulators of cytoskeletal and membrane dynamics. They bind both dynamin and Wiskott-Aldrich syndrome protein (WASP), and may provide direct links between the actin cytoskeletal machinery through WASP and dynamin-dependent endocytosis. Vetebrates harbor three isoforms with distinct expression patterns and specific functions. PACSINs contain an N-terminal F-BAR domain and a C-terminal SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212723 cd11789, SH3_Nebulin_family_C, C-terminal Src Homology 3 domain of the Nebulin family of proteins

 Score = 53.9 bits (130), Expect = 8e-10
 Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 10/60 (16%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEP---GWLAG--ELRGQTGWFPESYVEP 225
           RYRA+Y++ + + DE+SFQ GD+I      N E    GW+ G  +  GQ+G  P +YVE 
Sbjct: 1   RYRAMYDYAAADDDEVSFQEGDVI-----INVEIIDDGWMEGTVQRTGQSGMLPANYVEL 55

Nebulin family proteins contain multiple nebulin repeats, and may contain an N-terminal LIM domain and/or a C-terminal SH3 domain. They have molecular weights ranging from 34 to 900 kD, depending on the number of nebulin repeats, and they all bind actin. They are involved in the regulation of actin filament architecture and function as stabilizers and scaffolds for cytoskeletal structures with which they associate, such as long actin filaments or focal adhesions. Nebulin family proteins that contain a C-terminal SH3 domain include the giant filamentous protein nebulin, nebulette, Lasp1, and Lasp2. Lasp2, also called LIM-nebulette, is an alternatively spliced variant of nebulette. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212911 cd11978, SH3_VAV3_2, C-terminal (or second) Src homology 3 domain of VAV3 protein

 Score = 53.9 bits (129), Expect = 8e-10
 Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 174 AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           A Y+F +R+  ELS   GD++ +  K +   GW  GE+ G+ GWFP +YVE
Sbjct: 5   ARYDFCARDMRELSLLKGDVVKIYTKMSTN-GWWRGEVNGRVGWFPSTYVE 54

VAV3 is ubiquitously expressed and functions as a phosphorylation-dependent guanine nucleotide exchange factor (GEF) for RhoA, RhoG, and Rac1. It has been implicated to function in the hematopoietic, bone, cerebellar, and cardiovascular systems. VAV3 is essential in axon guidance in neurons that control blood pressure and respiration. It is overexpressed in prostate cancer cells and it plays a role in regulating androgen receptor transcriptional activity. VAV proteins contain several domains that enable their function: N-terminal calponin homology (CH), acidic, RhoGEF (also called Dbl-homologous or DH), Pleckstrin Homology (PH), C1 (zinc finger), SH2, and two SH3 domains. The SH3 domain of VAV is involved in the localization of proteins to specific sites within the cell, by interacting with proline-rich sequences within target proteins. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 56

>gnl|CDD|212764 cd11830, SH3_VAV_2, C-terminal (or second) Src homology 3 domain of VAV proteins

 Score = 53.0 bits (127), Expect = 1e-09
 Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 1/51 (1%)

Query: 174 AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           A Y+F +R+  ELS + GD++ +  K+  + GW  GE+ G+ GWFP +YVE
Sbjct: 4   ARYDFCARDMRELSLKEGDVVKIYNKKGQQ-GWWRGEINGRIGWFPSTYVE 53

VAV proteins function both as cytoplasmic guanine nucleotide exchange factors (GEFs) for Rho GTPases and scaffold proteins and they play important roles in cell signaling by coupling cell surface receptors to various effector functions. They play key roles in processes that require cytoskeletal reorganization including immune synapse formation, phagocytosis, cell spreading, and platelet aggregation, among others. Vertebrates have three VAV proteins (VAV1, VAV2, and VAV3). VAV proteins contain several domains that enable their function: N-terminal calponin homology (CH), acidic, RhoGEF (also called Dbl-homologous or DH), Pleckstrin Homology (PH), C1 (zinc finger), SH2, and two SH3 domains. The SH3 domain of VAV is involved in the localization of proteins to specific sites within the cell, by interacting with proline-rich sequences within target proteins. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212690 cd00174, SH3, Src Homology 3 domain superfamily

 Score = 52.5 bits (127), Expect = 2e-09
 Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 1/41 (2%)

Query: 119 YYIAAYPYDSTEPGDLTFNQDEVIYVTKKEND-WWTGTIGD 158
           Y  A Y Y++ +  +L+F + ++I V +K++D WW G +  
Sbjct: 1   YARALYDYEAQDDDELSFKKGDIITVLEKDDDGWWEGELNG 41

Src Homology 3 (SH3) domains are protein interaction domains that bind proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. Thus, they are referred to as proline-recognition domains (PRDs). SH3 domains are less selective and show more diverse specificity compared to other PRDs. They have been shown to bind peptide sequences that lack the PxxP motif; examples include the PxxDY motif of Eps8 and the RKxxYxxY sequence in SKAP55. SH3 domain containing proteins play versatile and diverse roles in the cell, including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies, among others. Many members of this superfamily are adaptor proteins that associate with a number of protein partners, facilitating complex formation and signal transduction. Length = 51

>gnl|CDD|212720 cd11786, SH3_SH3RF_1, First Src Homology 3 domain of SH3 domain containing ring finger proteins

 Score = 52.7 bits (127), Expect = 2e-09
 Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 2/52 (3%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           +A+Y +  +   +LSF+ GDII++  ++  +  W  GE  G+ G+FP SYV+
Sbjct: 3   KALYNYEGKEPGDLSFKKGDIILL--RKRIDENWYHGECNGKQGFFPASYVQ 52

This model represents the first SH3 domain of SH3RF1 (or POSH), SH3RF2 (or POSHER), SH3RF3 (POSH2), and similar domains. Members of this family are scaffold proteins that function as E3 ubiquitin-protein ligases. They all contain an N-terminal RING finger domain and multiple SH3 domains; SH3RF1 and SH3RF3 have four SH3 domains while SH3RF2 has three. SH3RF1 plays a role in calcium homeostasis through the control of the ubiquitin domain protein Herp. It may also have a role in regulating death receptor mediated and JNK mediated apoptosis. SH3RF3 interacts with p21-activated kinase 2 (PAK2) and GTP-loaded Rac1. It may play a role in regulating JNK mediated apoptosis in certain conditions. SH3RF2 acts as an anti-apoptotic regulator of the JNK pathway by binding to and promoting the degradation of SH3RF1. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212776 cd11842, SH3_Ysc84p_like, Src homology 3 domain of Ysc84p and similar fungal proteins

 Score = 52.8 bits (127), Expect = 2e-09
 Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 3/48 (6%)

Query: 119 YYIAAYPYDSTEPGDLTFNQDEVIYVTKK---ENDWWTGTIGDRTARF 163
             +A Y +   +PGDL F + ++I + KK   +NDWWTG IG R   F
Sbjct: 1   KAVALYDFAGEQPGDLAFQKGDIITILKKSDSQNDWWTGRIGGREGIF 48

This family is composed of the Saccharomyces cerevisiae proteins, Ysc84p (also called LAS17-binding protein 4, Lsb4p) and Lsb3p, and similar fungal proteins. They contain an N-terminal SYLF domain (also called DUF500) and a C-terminal SH3 domain. Ysc84p localizes to actin patches and plays an important in actin polymerization during endocytosis. The N-terminal domain of both Ysc84p and Lsb3p can bind and bundle actin filaments. A study of the yeast SH3 domain interactome predicts that the SH3 domains of Lsb3p and Lsb4p may function as molecular hubs for the assembly of endocytic complexes. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212994 cd12061, SH3_betaPIX, Src Homology 3 domain of beta-Pak Interactive eXchange factor

 Score = 52.8 bits (126), Expect = 2e-09
 Identities = 25/51 (49%), Positives = 30/51 (58%), Gaps = 2/51 (3%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYV 223
           RA + F   N DELSF  GD+I V   +  E GW  G   G+TGWFP +YV
Sbjct: 3   RAKFNFQQTNEDELSFSKGDVIHV--TRVEEGGWWEGTHNGRTGWFPSNYV 51

Beta-PIX, also called Rho guanine nucleotide exchange factor 7 (ARHGEF7) or Cool (Cloned out of Library)-1, activates small GTPases by exchanging bound GDP for free GTP. It acts as a GEF for both Cdc42 and Rac 1, and plays important roles in regulating neuroendocrine exocytosis, focal adhesion maturation, cell migration, synaptic vesicle localization, and insulin secretion. PIX proteins contain an N-terminal SH3 domain followed by RhoGEF (also called Dbl-homologous or DH) and Pleckstrin Homology (PH) domains, and a C-terminal leucine-zipper domain for dimerization. The SH3 domain of PIX binds to an atypical PxxxPR motif in p21-activated kinases (PAKs) with high affinity. The binding of PAKs to PIX facilitate the localization of PAKs to focal complexes and also localizes PAKs to PIX targets Cdc43 and Rac, leading to the activation of PAKs. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212737 cd11803, SH3_Endophilin_A, Src homology 3 domain of Endophilin-A

 Score = 52.6 bits (127), Expect = 2e-09
 Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 2/53 (3%)

Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
            RA+Y+F   N  EL F+ GDII +   Q  E  W  G + GQ+G+FP +YVE
Sbjct: 3   CRALYDFEPENEGELGFKEGDIITL-TNQIDE-NWYEGMVNGQSGFFPVNYVE 53

Endophilins play roles in synaptic vesicle formation, virus budding, mitochondrial morphology maintenance, receptor-mediated endocytosis inhibition, and endosomal sorting. They are classified into two types, A and B. Vertebrates contain three endophilin-A isoforms (A1, A2, and A3). Endophilin-A proteins are enriched in the brain and play multiple roles in receptor-mediated endocytosis. They tubulate membranes and regulate calcium influx into neurons to trigger the activation of the endocytic machinery. They are also involved in the sorting of plasma membrane proteins, actin filament assembly, and the uncoating of clathrin-coated vesicles for fusion with endosomes. Endophilins contain an N-terminal N-BAR domain (BAR domain with an additional N-terminal amphipathic helix), followed by a variable region containing proline clusters, and a C-terminal SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212727 cd11793, SH3_ephexin1_like, Src homology 3 domain of ephexin-1-like SH3 domain containing Rho guanine nucleotide exchange factors

 Score = 52.0 bits (125), Expect = 3e-09
 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 4/53 (7%)

Query: 174 AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE-LR-GQTGWFPESYVE 224
            ++ + ++  DEL+ + GD++ V  K     GW  GE LR G+ GWFP SY E
Sbjct: 4   CVHAYTAQQPDELTLEEGDVVNVLRKMP--DGWYEGERLRDGERGWFPSSYTE 54

Members of this family contain RhoGEF (also called Dbl-homologous or DH), Pleckstrin Homology (PH), and C-terminal SH3 domains. They include the Rho guanine nucleotide exchange factors ARHGEF5, ARHGEF16, ARHGEF19, ARHGEF26, ARHGEF27 (also called ephexin-1), and similar proteins, and are also called ephexins because they interact directly with ephrin A receptors. GEFs interact with Rho GTPases via their DH domains to catalyze nucleotide exchange by stabilizing the nucleotide-free GTPase intermediate. They play important roles in neuronal development. The SH3 domains of ARHGEFs play an autoinhibitory role through intramolecular interactions with a proline-rich region N-terminal to the DH domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|219499 pfam07653, SH3_2, Variant SH3 domain

 Score = 51.7 bits (125), Expect = 4e-09
 Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 2/55 (3%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
             R I+++V+ + +ELS + GD++ V + ++   GW  GE  G+ G  P SYVE 
Sbjct: 1   YGRVIFDYVATDPNELSLKKGDVVKV-LDKDD-NGWWEGERGGRRGLVPSSYVEE 53

SH3 (Src homology 3) domains are often indicative of a protein involved in signal transduction related to cytoskeletal organisation. First described in the Src cytoplasmic tyrosine kinase. The structure is a partly opened beta barrel. Length = 53

>gnl|CDD|212910 cd11977, SH3_VAV2_2, C-terminal (or second) Src homology 3 domain of VAV2 protein

 Score = 51.6 bits (123), Expect = 4e-09
 Identities = 21/51 (41%), Positives = 31/51 (60%)

Query: 174 AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           A Y F +R+  ELS + GD++ +  +   + GW  GE  G+ GWFP +YVE
Sbjct: 5   ARYNFAARDMRELSLREGDVVRIYSRIGGDQGWWKGETNGRIGWFPSTYVE 55

VAV2 is widely expressed and functions as a guanine nucleotide exchange factor (GEF) for RhoA, RhoB and RhoG and also activates Rac1 and Cdc42. It is implicated in many cellular and physiological functions including blood pressure control, eye development, neurite outgrowth and branching, EGFR endocytosis and degradation, and cell cluster morphology, among others. It has been reported to associate with Nek3. VAV proteins contain several domains that enable their function: N-terminal calponin homology (CH), acidic, RhoGEF (also called Dbl-homologous or DH), Pleckstrin Homology (PH), C1 (zinc finger), SH2, and two SH3 domains. The SH3 domain of VAV is involved in the localization of proteins to specific sites within the cell, by interacting with proline-rich sequences within target proteins. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 58

>gnl|CDD|212752 cd11818, SH3_Eve1_5, Fifth Src homology 3 domain of ADAM-binding protein Eve-1

 Score = 50.9 bits (122), Expect = 6e-09
 Identities = 24/52 (46%), Positives = 36/52 (69%), Gaps = 2/52 (3%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESY 222
           + RA+Y+F   N DELSF+ GDII      + E  W++GELRG++G FP+++
Sbjct: 1   KARALYDFTGENEDELSFKAGDIITELESIDEE--WMSGELRGKSGIFPKNF 50

Eve-1, also called SH3 domain-containing protein 19 (SH3D19) or EEN-binding protein (EBP), exists in multiple alternatively spliced isoforms. The longest isoform contains five SH3 domain in the C-terminal region and seven proline-rich motifs in the N-terminal region. It is abundantly expressed in skeletal muscle and heart, and may be involved in regulating the activity of ADAMs (A disintegrin and metalloproteases). Eve-1 interacts with EEN, an endophilin involved in endocytosis and may be the target of the MLL-EEN fusion protein that is implicated in leukemogenesis. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 50

>gnl|CDD|214620 smart00326, SH3, Src homology 3 domains

 Score = 51.0 bits (123), Expect = 7e-09
 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 118 KYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEND-WWTGTIGD 158
               A Y Y + +P +L+F + ++I V +K +D WW G +G 
Sbjct: 3   PQVRALYDYTAQDPDELSFKKGDIITVLEKSDDGWWKGRLGR 44

Src homology 3 (SH3) domains bind to target proteins through sequences containing proline and hydrophobic amino acids. Pro-containing polypeptides may bind to SH3 domains in 2 different binding orientations. Length = 56

>gnl|CDD|215659 pfam00018, SH3_1, SH3 domain

 Score = 50.6 bits (122), Expect = 7e-09
 Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 3/48 (6%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL-RGQTGWFP 219
            A+Y++ +R  DELSF+ GDII+V  K +   GW  G L  G+ G  P
Sbjct: 1   VALYDYTAREPDELSFKKGDIIIVLEKSDD--GWWKGRLKGGKEGLIP 46

SH3 (Src homology 3) domains are often indicative of a protein involved in signal transduction related to cytoskeletal organisation. First described in the Src cytoplasmic tyrosine kinase. The structure is a partly opened beta barrel. Length = 47

>gnl|CDD|212771 cd11837, SH3_Intersectin_2, Second Src homology 3 domain (or SH3B) of Intersectin

 Score = 50.8 bits (122), Expect = 7e-09
 Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 4/54 (7%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL-RGQTGWFPESYV 223
              A+Y + ++  + LSF  GDII V  +Q     W  GEL  G+ GWFP+SYV
Sbjct: 1   TATALYPWRAKKENHLSFAKGDIITVLEQQEM---WWFGELEGGEEGWFPKSYV 51

Intersectins (ITSNs) are adaptor proteins that function in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. They are essential for initiating clathrin-coated pit formation. They bind to many proteins through their multidomain structure and facilitate the assembly of multimeric complexes. Vertebrates contain two ITSN proteins, ITSN1 and ITSN2, which exist in alternatively spliced short and long isoforms. The short isoforms contain two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoforms, in addition, contain RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. ITSN1 and ITSN2 are both widely expressed, with variations depending on tissue type and stage of development. The second SH3 domain (or SH3B) of ITSN1 has been shown to bind WNK and CdGAP. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212867 cd11934, SH3_Lasp1_C, C-terminal Src Homology 3 domain of LIM and SH3 domain protein 1

 Score = 50.8 bits (121), Expect = 1e-08
 Identities = 27/57 (47%), Positives = 38/57 (66%), Gaps = 4/57 (7%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAG--ELRGQTGWFPESYVE 224
           +RYRA+Y++ + + DE+SFQ GD I V V+Q  + GW+ G  E  G TG  P +YVE
Sbjct: 3   KRYRAVYDYNAADEDEVSFQDGDTI-VNVQQ-IDDGWMYGTVERTGDTGMLPANYVE 57

Lasp1 is a cytoplasmic protein that binds focal adhesion proteins and is involved in cell signaling, migration, and proliferation. It is overexpressed in several cancer cells including breast, ovarian, bladder, and liver. In cancer cells, it can be found in the nucleus; its degree of nuclear localization correlates with tumor size and poor prognosis. Lasp1 is a 36kD protein containing an N-terminal LIM domain, two nebulin repeats, and a C-terminal SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 59

>gnl|CDD|212993 cd12060, SH3_alphaPIX, Src Homology 3 domain of alpha-Pak Interactive eXchange factor

 Score = 50.8 bits (121), Expect = 1e-08
 Identities = 25/52 (48%), Positives = 30/52 (57%), Gaps = 2/52 (3%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           +A + F   N DELS   GDII V   +  E GW  G L G+TGWFP +YV 
Sbjct: 5   KARFNFKQTNEDELSVCKGDIIYV--TRVEEGGWWEGTLNGKTGWFPSNYVR 54

Alpha-PIX, also called Rho guanine nucleotide exchange factor 6 (ARHGEF6) or Cool (Cloned out of Library)-2, activates small GTPases by exchanging bound GDP for free GTP. It acts as a GEF for both Cdc42 and Rac 1, and is localized in dendritic spines where it regulates spine morphogenesis. It controls dendritic length and spine density in the hippocampus. Mutations in the ARHGEF6 gene cause X-linked intellectual disability in humans. PIX proteins contain an N-terminal SH3 domain followed by RhoGEF (also called Dbl-homologous or DH) and Pleckstrin Homology (PH) domains, and a C-terminal leucine-zipper domain for dimerization. The SH3 domain of PIX binds to an atypical PxxxPR motif in p21-activated kinases (PAKs) with high affinity. The binding of PAKs to PIX facilitate the localization of PAKs to focal complexes and also localizes PAKs to PIX targets Cdc43 and Rac, leading to the activation of PAKs. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 58

>gnl|CDD|212929 cd11996, SH3_Intersectin2_5, Fifth Src homology 3 domain (or SH3E) of Intersectin-2

 Score = 49.6 bits (118), Expect = 2e-08
 Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 2/51 (3%)

Query: 174 AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           A+Y++ + N DELSF  G +I V  K +  P W  GE+ G TG FP +YV+
Sbjct: 5   AMYDYTANNEDELSFSKGQLINVLNKDD--PDWWQGEINGVTGLFPSNYVK 53

Intersectin-2 (ITSN2) is an adaptor protein that functions in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. It plays a role in clathrin-coated pit (CCP) formation. It binds to many proteins through its multidomain structure and facilitate the assembly of multimeric complexes. ITSN2 also functions as a specific GEF for Cdc42 activation in epithelial morphogenesis, and is required in mitotic spindle orientation. It exists in alternatively spliced short and long isoforms. The short isoform contains two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoform, in addition, contains RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. The fifth SH3 domain (or SH3E) of ITSN2 is expected to bind protein partners, similar to ITSN1 which has been shown to bind many protein partners including SGIP1, Sos1, dynamin1/2, CIN85, c-Cbl, SHIP2, N-WASP, and synaptojanin-1, among others. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212714 cd11780, SH3_Sorbs_3, Third (or C-terminal) Src Homology 3 domain of Sorbin and SH3 domain containing (Sorbs) proteins and similar domains

 Score = 49.6 bits (119), Expect = 2e-08
 Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 4/57 (7%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAG--ELRGQTGWFPESYVEP 225
           RYRA+Y +  +N DEL  + GDI  V V +  + GW  G  E  G  G FP +YV  
Sbjct: 1   RYRALYSYTPQNEDELELREGDI--VYVMEKCDDGWFVGTSERTGLFGTFPGNYVAR 55

This family, also called the vinexin family, is composed predominantly of adaptor proteins containing one sorbin homology (SoHo) and three SH3 domains. Members include the third SH3 domains of Sorbs1 (or ponsin), Sorbs2 (or ArgBP2), Vinexin (or Sorbs3), and similar domains. They are involved in the regulation of cytoskeletal organization, cell adhesion, and growth factor signaling. Members of this family bind multiple partners including signaling molecules like c-Abl, c-Arg, Sos, and c-Cbl, as well as cytoskeletal molecules such as vinculin and afadin. They may have overlapping functions. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212882 cd11949, SH3_GRB2_C, C-terminal Src homology 3 domain of Growth factor receptor-bound protein 2

 Score = 49.5 bits (118), Expect = 2e-08
 Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 2/53 (3%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
           +A+++F  +   EL F+ GD I   V  N++P W  G   GQTG FP +YV P
Sbjct: 3   QALFDFDPQEDGELGFRRGDFI--EVMDNSDPNWWKGACHGQTGMFPRNYVTP 53

GRB2 is a critical signaling molecule that regulates the Ras pathway by linking tyrosine kinases to the Ras guanine nucleotide releasing protein Sos (son of sevenless), which converts Ras to the active GTP-bound state. It is ubiquitously expressed in all tissues throughout development and is important in cell cycle progression, motility, morphogenesis, and angiogenesis. In lymphocytes, GRB2 is associated with antigen receptor signaling components. GRB2 contains an N-terminal SH3 domain, a central SH2 domain, and a C-terminal SH3 domain. The C-terminal SH3 domain of GRB2 binds to Gab2 (Grb2-associated binder 2) through epitopes containing RxxK motifs, as well as to the proline-rich C-terminus of FGRF2. SH3 domains are protein interaction domains that typically bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212750 cd11816, SH3_Eve1_3, Third Src homology 3 domain of ADAM-binding protein Eve-1

 Score = 48.6 bits (116), Expect = 4e-08
 Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 2/53 (3%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYV 223
           R  A ++F     DELSF  GD+I +      E  W  GEL G+ G FP ++V
Sbjct: 1   RCVARFDFEGEQEDELSFSEGDVITLKEYVGEE--WAKGELNGKIGIFPLNFV 51

Eve-1, also called SH3 domain-containing protein 19 (SH3D19) or EEN-binding protein (EBP), exists in multiple alternatively spliced isoforms. The longest isoform contains five SH3 domain in the C-terminal region and seven proline-rich motifs in the N-terminal region. It is abundantly expressed in skeletal muscle and heart, and may be involved in regulating the activity of ADAMs (A disintegrin and metalloproteases). Eve-1 interacts with EEN, an endophilin involved in endocytosis and may be the target of the MLL-EEN fusion protein that is implicated in leukemogenesis. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 51

>gnl|CDD|212883 cd11950, SH3_GRAP2_C, C-terminal Src homology 3 domain of GRB2-related adaptor protein 2

 Score = 48.7 bits (116), Expect = 4e-08
 Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 2/53 (3%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
           RA+Y+F +   DEL F  GD+I   V  ++ P W  G L G+ G FP +YV P
Sbjct: 3   RALYDFEALEDDELGFNSGDVI--EVLDSSNPSWWKGRLHGKLGLFPANYVAP 53

GRAP2 is also called GADS (GRB2-related adapter downstream of Shc), GrpL, GRB2L, Mona, or GRID (Grb2-related protein with insert domain). It is expressed specifically in the hematopoietic system. It plays an important role in T cell receptor (TCR) signaling by promoting the formation of the SLP-76:LAT complex, which couples the TCR to the Ras pathway. It also has roles in antigen-receptor and tyrosine kinase mediated signaling. GRAP2 is unique from other GRB2-like adaptor proteins in that it can be regulated by caspase cleavage. It contains an N-terminal SH3 domain, a central SH2 domain, and a C-terminal SH3 domain. The C-terminal SH3 domain of GRAP2 binds to different motifs found in substrate peptides including the typical PxxP motif in hematopoietic progenitor kinase 1 (HPK1), the RxxK motif in SLP-76 and HPK1, and the RxxxxK motif in phosphatase-like protein HD-PTP. SH3 domains are protein interaction domains that typically bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212775 cd11841, SH3_SH3YL1_like, Src homology 3 domain of SH3 domain containing Ysc84-like 1 (SH3YL1) protein

 Score = 48.5 bits (116), Expect = 4e-08
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 3/45 (6%)

Query: 122 AAYPYDSTEPGDLTFNQDEVIYV---TKKENDWWTGTIGDRTARF 163
           A Y ++  +P DL+F   + I V   T  + DWW G +  R   F
Sbjct: 4   ALYSFEGQQPCDLSFQAGDRITVLTRTDSQFDWWEGRLRGRVGIF 48

SH3YL1 localizes to the plasma membrane and is required for dorsal ruffle formation. It binds phosphoinositides (PIs) with high affinity through its N-terminal SYLF domain (also called DUF500). In addition, SH3YL1 contains a C-terminal SH3 domain which has been reported to bind to N-WASP, dynamin 2, and SHIP2 (a PI 5-phosphatase). SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212763 cd11829, SH3_GAS7, Src homology 3 domain of Growth Arrest Specific protein 7

 Score = 48.7 bits (116), Expect = 5e-08
 Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 3/54 (5%)

Query: 171 RYRAIYEFVSRNGDE-LSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYV 223
             R +Y F      + LSF+ G++I V   Q  + GW  GE  G  GWFP SYV
Sbjct: 1   LCRTLYAFTGEQHQQGLSFEAGELIRV--LQAPDGGWWEGEKDGLRGWFPASYV 52

GAS7 is mainly expressed in the brain and is required for neurite outgrowth. It may also play a role in the protection and migration of embryonic stem cells. Treatment-related acute myeloid leukemia (AML) has been reported resulting from mixed-lineage leukemia (MLL)-GAS7 translocations as a complication of primary cancer treatment. GAS7 contains an N-terminal SH3 domain, followed by a WW domain, and a central F-BAR domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 52

>gnl|CDD|212884 cd11951, SH3_GRAP_C, C-terminal Src homology 3 domain of GRB2-related adaptor protein

 Score = 48.6 bits (116), Expect = 5e-08
 Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 2/53 (3%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
           +A Y+F + +  +LSF+ GDII   V    +P W  G + G+ G+FP +YV P
Sbjct: 3   QAQYDFSAEDPSQLSFRRGDII--EVLDCPDPNWWRGRISGRVGFFPRNYVHP 53

GRAP is a GRB-2 like adaptor protein that is highly expressed in lymphoid tissues. It acts as a negative regulator of T cell receptor (TCR)-induced lymphocyte proliferation by downregulating the signaling to the Ras/ERK pathway. It has been identified as a regulator of TGFbeta signaling in diabetic kidney tubules and may have a role in the pathogenesis of the disease. GRAP contains an N-terminal SH3 domain, a central SH2 domain, and a C-terminal SH3 domain. The C-terminal SH3 domains (SH3c) of the related proteins, GRB2 and GRAP2, have been shown to bind to classical PxxP motif ligands, as well as to non-classical motifs. GRB2 SH3c binds Gab2 (Grb2-associated binder 2) through epitopes containing RxxK motifs, while the SH3c of GRAP2 binds to the phosphatase-like protein HD-PTP via a RxxxxK motif. SH3 domains are protein interaction domains that typically bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212928 cd11995, SH3_Intersectin1_5, Fifth Src homology 3 domain (or SH3E) of Intersectin-1

 Score = 48.4 bits (115), Expect = 6e-08
 Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 2/51 (3%)

Query: 174 AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
            +Y++ ++N DEL+F  G II V  K+  +P W  GEL GQ G FP +YV+
Sbjct: 5   GMYDYTAQNDDELAFSKGQIINVLNKE--DPDWWKGELNGQVGLFPSNYVK 53

Intersectin-1 (ITSN1) is an adaptor protein that functions in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. It plays a role in clathrin-coated pit (CCP) formation. It binds to many proteins through its multidomain structure and facilitate the assembly of multimeric complexes. ITSN1 localizes in membranous organelles, CCPs, the Golgi complex, and may be involved in the cell membrane trafficking system. It exists in alternatively spliced short and long isoforms. The short isoform contains two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoform, in addition, contains RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. The fifth SH3 domain (or SH3E) of ITSN1 has been shown to bind many protein partners including SGIP1, Sos1, dynamin1/2, CIN85, c-Cbl, SHIP2, N-WASP, and synaptojanin-1, among others. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212997 cd12064, SH3_GRAF, Src Homology 3 domain of GTPase Regulator Associated with Focal adhesion kinase

 Score = 48.2 bits (114), Expect = 6e-08
 Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 1/55 (1%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           R+ +A+Y   + +  ELSF  G  +   V  + EPGWL G L G+TG  PE+YVE
Sbjct: 1   RKAKALYACKAEHDSELSFTAG-TVFDNVHPSQEPGWLEGTLNGKTGLIPENYVE 54

GRAF, also called Rho GTPase activating protein 26 (ARHGAP26), Oligophrenin-1-like (OPHN1L) or GRAF1, is a GAP with activity towards RhoA and Cdc42 and is only weakly active towards Rac1. It influences Rho-mediated cytoskeletal rearrangements and binds focal adhesion kinase (FAK), which is a critical component of integrin signaling. It is essential for the major clathrin-independent endocytic pathway mediated by pleiomorphic membranes. GRAF contains an N-terminal BAR domain, followed by a Pleckstrin homology (PH) domain, a Rho GAP domain, and a C-terminal SH3 domain. The SH3 domain of GRAF binds PKNbeta, a target of the small GTPase Rho. SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies. Length = 56

>gnl|CDD|212868 cd11935, SH3_Nebulette_C, C-terminal Src Homology 3 domain of Nebulette and LIM-nebulette (or Lasp2)

 Score = 48.5 bits (115), Expect = 7e-08
 Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 10/60 (16%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEP---GWLAGELR--GQTGWFPESYVE 224
           R YRA+Y++ +++ DE+SF+ GD I      N +P   GW+ G ++  G+TG  P +Y+E
Sbjct: 1   RTYRAMYDYSAQDEDEVSFRDGDYI-----VNVQPIDEGWMYGTVQRTGRTGMLPANYIE 55

Nebulette is a cardiac-specific protein that localizes to the Z-disc. It interacts with tropomyosin and is important in stabilizing actin thin filaments in cardiac muscles. Polymorphisms in the nebulette gene are associated with dilated cardiomyopathy, with some mutations resulting in severe heart failure. Nebulette is a 107kD protein that contains an N-terminal acidic region, multiple nebulin repeats, and a C-terminal SH3 domain. LIM-nebulette, also called Lasp2 (LIM and SH3 domain protein 2), is an alternatively spliced variant of nebulette. Although it shares a gene with nebulette, Lasp2 is not transcribed from a muscle-specific promoter, giving rise to its multiple tissue expression pattern with highest amounts in the brain. It can crosslink actin filaments and it affects cell spreading. Lasp2 is a 34kD protein containing an N-terminal LIM domain, three nebulin repeats, and a C-terminal SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 58

>gnl|CDD|212747 cd11813, SH3_SGSM3, Src Homology 3 domain of Small G protein Signaling Modulator 3

 Score = 47.9 bits (114), Expect = 8e-08
 Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 2/54 (3%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           R +A+ +F   + DEL F+  DII + + Q  E  W+ GEL G  GWFP  +VE
Sbjct: 1   RAKALLDFERHDDDELGFRKNDIITI-ISQKDEHCWV-GELNGLRGWFPAKFVE 52

SGSM3 is also called Merlin-associated protein (MAP), RUN and SH3 domain-containing protein (RUSC3), RUN and TBC1 domain-containing protein 3 (RUTBC3), Rab GTPase-activating protein 5 (RabGAP5), or Rab GAP-like protein (RabGAPLP). It is expressed ubiquitously and functions as a regulator of small G protein RAP- and RAB-mediated neuronal signaling. It is involved in modulating NGF-mediated neurite outgrowth and differentiation. It also interacts with the tumor suppressor merlin and may play a role in the merlin-associated suppression of cell growth. SGSM3 contains TBC, SH3, and RUN domains. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212847 cd11914, SH3_BAIAP2L2, Src Homology 3 domain of Brain-specific Angiogenesis Inhibitor 1-Associated Protein 2-Like 2

 Score = 47.9 bits (114), Expect = 8e-08
 Identities = 28/59 (47%), Positives = 33/59 (55%), Gaps = 4/59 (6%)

Query: 170 RRYRAIYEF-VSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQT--GWFPESYVEP 225
           RR RAI       N   L F  GDII V V + A  GWL G+L G +  GWFPE+YV+ 
Sbjct: 1   RRVRAIVSHPAGSNPTLLRFNRGDIITVLVPE-ARNGWLYGKLEGSSRQGWFPEAYVKA 58

BAIAP2L2 co-localizes with clathrin plaques but its function has not been determined. It contains an N-terminal IMD or Inverse-Bin/Amphiphysin/Rvs (I-BAR) domain, an SH3 domain, and a WASP homology 2 (WH2) actin-binding motif at the C-terminus. The related proteins, BAIAP2L1 and IRSp53, function as regulators of membrane dynamics and the actin cytoskeleton. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 59

>gnl|CDD|212806 cd11873, SH3_CD2AP-like_1, First Src Homology 3 domain (SH3A) of CD2-associated protein and similar proteins

 Score = 47.6 bits (114), Expect = 9e-08
 Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 2/53 (3%)

Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
               +++ +   DEL+ + GDII   VK+  E GW  G L G+ G FP+++V+
Sbjct: 2   VIVEFDYDAEEPDELTLKVGDII-TNVKKMEE-GWWEGTLNGKRGMFPDNFVK 52

This subfamily is composed of the first SH3 domain (SH3A) of CD2AP, CIN85 (Cbl-interacting protein of 85 kDa), and similar domains. CD2AP and CIN85 are adaptor proteins that bind to protein partners and assemble complexes that have been implicated in T cell activation, kidney function, and apoptosis of neuronal cells. They also associate with endocytic proteins, actin cytoskeleton components, and other adaptor proteins involved in receptor tyrosine kinase (RTK) signaling. CD2AP and the main isoform of CIN85 contain three SH3 domains, a proline-rich region, and a C-terminal coiled-coil domain. All of these domains enable CD2AP and CIN85 to bind various protein partners and assemble complexes that have been implicated in many different functions. SH3A of both proteins bind to an atypical PXXXPR motif at the C-terminus of Cbl and the cytoplasmic domain of the cell adhesion protein CD2. CIN85 SH3A binds to internal proline-rich motifs within the proline-rich region; this intramolecular interaction serves as a regulatory mechanism to keep CIN85 in a closed conformation, preventing the recruitment of other proteins. CIN85 SH3A has also been shown to bind ubiquitin. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212816 cd11883, SH3_Sdc25, Src Homology 3 domain of Sdc25/Cdc25 guanine nucleotide exchange factors

 Score = 47.7 bits (114), Expect = 9e-08
 Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 7/55 (12%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL-----RGQTGWFPESY 222
            A+Y+F  ++ ++LSF+ GDII V  K  +  GW  G +     + + GWFP +Y
Sbjct: 3   VALYDFTPKSKNQLSFKAGDIIYVLNKDPS--GWWDGVIISSSGKVKRGWFPSNY 55

This subfamily is composed of the Saccharomyces cerevisiae guanine nucleotide exchange factors (GEFs) Sdc25 and Cdc25, and similar proteins. These GEFs regulate Ras by stimulating the GDP/GTP exchange on Ras. Cdc25 is involved in the Ras/PKA pathway that plays an important role in the regulation of metabolism, stress responses, and proliferation, depending on available nutrients and conditions. Proteins in this subfamily contain an N-terminal SH3 domain as well as REM (Ras exchanger motif) and RasGEF domains at the C-terminus. SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies. Length = 55

>gnl|CDD|212905 cd11972, SH3_Abi2, Src homology 3 domain of Abl Interactor 2

 Score = 48.1 bits (114), Expect = 9e-08
 Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 2/51 (3%)

Query: 174 AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           AIY++     DELSFQ G II V +K+N + GW  G + G TG FP +YVE
Sbjct: 7   AIYDYTKDKEDELSFQEGAIIYV-IKKN-DDGWYEGVMNGVTGLFPGNYVE 55

Abi2 is highly expressed in the brain and eye. It regulates actin cytoskeletal reorganization at adherens junctions and dendritic spines, which is important in cell morphogenesis, migration, and cognitive function. Mice deficient with Abi2 show defects in orientation and migration of lens fibers, neuronal migration, dendritic spine morphology, as well as deficits in learning and memory. Abi proteins are adaptor proteins serving as binding partners and substrates of Abl tyrosine kinases. They are involved in regulating actin cytoskeletal reorganization and play important roles in membrane-ruffling, endocytosis, cell motility, and cell migration. Abi proteins contain a homeobox homology domain, a proline-rich region, and a SH3 domain. The SH3 domain of Abi binds to a PxxP motif in Abl. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 61

>gnl|CDD|212881 cd11948, SH3_GRAP_N, N-terminal Src homology 3 domain of GRB2-related adaptor protein

 Score = 47.5 bits (113), Expect = 1e-07
 Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 1/51 (1%)

Query: 174 AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           A+Y F +   DEL FQ GDI+ + +    +  W   EL+G+ G+ P++Y++
Sbjct: 4   ALYSFQATESDELPFQKGDILKI-LNMEDDQNWYKAELQGREGYIPKNYIK 53

GRAP is a GRB-2 like adaptor protein that is highly expressed in lymphoid tissues. It acts as a negative regulator of T cell receptor (TCR)-induced lymphocyte proliferation by downregulating the signaling to the Ras/ERK pathway. It has been identified as a regulator of TGFbeta signaling in diabetic kidney tubules and may have a role in the pathogenesis of the disease. GRAP contains an N-terminal SH3 domain, a central SH2 domain, and a C-terminal SH3 domain. The N-terminal SH3 domain of the related protein GRB2 binds to Sos and Sos-derived proline-rich peptides. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212990 cd12057, SH3_CIN85_3, Third Src Homology 3 domain (SH3C) of Cbl-interacting protein of 85 kDa

 Score = 47.6 bits (113), Expect = 1e-07
 Identities = 18/52 (34%), Positives = 34/52 (65%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           + ++ + ++N DEL+ + GDI+ +  K   + GW  GEL G+ G FP+++V+
Sbjct: 3   KVLFPYEAQNEDELTIKEGDIVTLISKDCIDAGWWEGELNGRRGVFPDNFVK 54

CIN85, also called SH3 domain-containing kinase-binding protein 1 (SH3KBP1) or CD2-binding protein 3 (CD2BP3) or Ruk, is an adaptor protein that is involved in the downregulation of receptor tyrosine kinases by facilitating endocytosis through interaction with endophilin-associated ubiquitin ligase Cbl proteins. It is also important in many other cellular processes including vesicle-mediated transport, cytoskeletal remodelling, apoptosis, cell adhesion and migration, and viral infection, among others. CIN85 exists as multiple variants from alternative splicing; the main variant contains three SH3 domains, a proline-rich region, and a C-terminal coiled-coil domain. All of these domains enable CIN85 to bind various protein partners and assemble complexes that have been implicated in many different functions. This alignment model represents the third SH3 domain (SH3C) of CIN85. SH3C has been shown to bind ubiquitin. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 56

>gnl|CDD|212713 cd11779, SH3_Irsp53_BAIAP2L, Src Homology 3 domain of Insulin Receptor tyrosine kinase Substrate p53, Brain-specific Angiogenesis Inhibitor 1-Associated Protein 2 (BAIAP2)-Like proteins, and similar proteins

 Score = 47.3 bits (113), Expect = 1e-07
 Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 3/58 (5%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL--RGQTGWFPESYVEP 225
            R +A+Y   +    +LSF+ GD+I +   +  + GW  GE    G+ GWFP +Y EP
Sbjct: 1   PRVKALYPHAAGGETQLSFEEGDVITLLGPEPRD-GWHYGENERSGRRGWFPIAYTEP 57

Proteins in this family include IRSp53, BAIAP2L1, BAIAP2L2, and similar proteins. They all contain an Inverse-Bin/Amphiphysin/Rvs (I-BAR) or IMD domain in addition to the SH3 domain. IRSp53, also known as BAIAP2, is a scaffolding protein that takes part in many signaling pathways including Cdc42-induced filopodia formation, Rac-mediated lamellipodia extension, and spine morphogenesis. IRSp53 exists as multiple splicing variants that differ mainly at the C-termini. BAIAP2L1, also called IRTKS (Insulin Receptor Tyrosine Kinase Substrate), serves as a substrate for the insulin receptor and binds the small GTPase Rac. It plays a role in regulating the actin cytoskeleton and colocalizes with F-actin, cortactin, VASP, and vinculin. IRSp53 and IRTKS also mediate the recruitment of effector proteins Tir and EspFu, which regulate host cell actin reorganization, to bacterial attachment sites. BAIAP2L2 co-localizes with clathrin plaques but its function has not been determined. The SH3 domains of IRSp53 and IRTKS have been shown to bind the proline-rich C-terminus of EspFu. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 57

>gnl|CDD|212773 cd11839, SH3_Intersectin_4, Fourth Src homology 3 domain (or SH3D) of Intersectin

 Score = 47.3 bits (113), Expect = 1e-07
 Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 7/57 (12%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRG-----QTGWFPESYVE 224
           + I  F +   ++LS   G +++  V++ +  GW  GEL+      Q GWFP +YV+
Sbjct: 3   QVIAPFTATAENQLSLAVGQLVL--VRKKSPSGWWEGELQARGKKRQIGWFPANYVK 57

Intersectins (ITSNs) are adaptor proteins that function in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. They are essential for initiating clathrin-coated pit formation. They bind to many proteins through their multidomain structure and facilitate the assembly of multimeric complexes. Vertebrates contain two ITSN proteins, ITSN1 and ITSN2, which exist in alternatively spliced short and long isoforms. The short isoforms contain two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoforms, in addition, contain RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. ITSN1 and ITSN2 are both widely expressed, with variations depending on tissue type and stage of development. The fourth SH3 domain (or SH3D) of ITSN1 has been shown to bind SHIP2, Numb, CdGAP, and N-WASP. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 58

>gnl|CDD|212798 cd11864, SH3_PEX13_eumet, Src Homology 3 domain of eumetazoan Peroxisomal biogenesis factor 13

 Score = 47.2 bits (113), Expect = 1e-07
 Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 3/55 (5%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVK--QNAEPGWLAGELRGQT-GWFPESYVE 224
           RA Y+FV+ + DELSF+ GD + +  K  Q    GWL   + GQ  G  P +YV+
Sbjct: 3   RAEYDFVAESEDELSFRAGDKLRLAPKELQPRVRGWLLATVDGQKIGLVPANYVK 57

PEX13 is a peroxin and is required for protein import into the peroxisomal matrix and membrane. It is an integral membrane protein that is essential for the localization of PEX14 and the import of proteins containing the peroxisome matrix targeting signals, PTS1 and PTS2. Mutations of the PEX13 gene in humans lead to a wide range of peroxisome biogenesis disorders (PBDs), the most severe of which is known as Zellweger syndrome (ZS), a severe multisystem disorder characterized by hypotonia, psychomotor retardation, and neuronal migration defects. PEX13 contains two transmembrane regions and a C-terminal SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 58

>gnl|CDD|212706 cd11772, SH3_OSTF1, Src Homology 3 domain of metazoan osteoclast stimulating factor 1

 Score = 46.9 bits (112), Expect = 2e-07
 Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 1/42 (2%)

Query: 120 YIAAYPYDSTEPGDLTFNQDEVIYVT-KKENDWWTGTIGDRT 160
           + A Y Y++  P +L+F + +++Y++ K + +WW  T G +T
Sbjct: 2   FRALYDYEAQHPDELSFEEGDLLYISDKSDPNWWKATCGGKT 43

OSTF1, also named OSF or SH3P2, is a signaling protein containing SH3 and ankyrin-repeat domains. It acts through a Src-related pathway to enhance the formation of osteoclasts and bone resorption. It also acts as a negative regulator of cell motility. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212829 cd11896, SH3_SNX33, Src Homology 3 domain of Sorting Nexin 33

 Score = 46.9 bits (111), Expect = 2e-07
 Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 2/55 (3%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE-LRGQTGWFPESYVE 224
           + RA+Y F S N +E++ Q  + +++   +N+  GWL G+  RG+TG FP SYVE
Sbjct: 1   KARALYSFQSENKEEINIQENEELVI-FSENSLDGWLQGQNSRGETGLFPASYVE 54

SNX33 interacts with Wiskott-Aldrich syndrome protein (WASP) and plays a role in the maintenance of cell shape and cell cycle progression. It modulates the shedding and endocytosis of cellular prion protein (PrP(c)) and amyloid precursor protein (APP). SNXs are Phox homology (PX) domain containing proteins that are involved in regulating membrane traffic and protein sorting in the endosomal system. SNX33 also contains BAR and SH3 domains. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212979 cd12046, SH3_p67phox_C, C-terminal (or second) Src Homology 3 domain of the p67phox subunit of NADPH oxidase

 Score = 46.7 bits (111), Expect = 2e-07
 Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 2/52 (3%)

Query: 174 AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
           A++ + +   ++L FQ GD+I+V  K N +  WL G+ +G+ G FP ++VE 
Sbjct: 4   ALFSYEASQPEDLEFQKGDVILVLSKVNED--WLEGQCKGKIGIFPSAFVED 53

p67phox, also called Neutrophil cytosol factor 2 (NCF-2), is a cytosolic subunit of the phagocytic NADPH oxidase complex (also called Nox2 or gp91phox) which plays a crucial role in the cellular response to bacterial infection. NADPH oxidase catalyzes the transfer of electrons from NADPH to oxygen during phagocytosis forming superoxide and reactive oxygen species. p67phox plays a regulatory role and contains N-terminal TPR, first SH3 (or N-terminal or central SH3), PB1, and C-terminal SH3 domains. It binds, via its C-terminal SH3 domain, to a proline-rich region of p47phox and upon activation, this complex assembles with flavocytochrome b558, the Nox2-p22phox heterodimer. Concurrently, RacGTP translocates to the membrane and interacts with the TPR domain of p67phox, which leads to the activation of NADPH oxidase. The PB1 domain of p67phox binds to its partner PB1 domain in p40phox, and this facilitates the assembly of p47phox-p67phox at the membrane. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212920 cd11987, SH3_Intersectin1_1, First Src homology 3 domain (or SH3A) of Intersectin-1

 Score = 46.1 bits (109), Expect = 3e-07
 Identities = 20/34 (58%), Positives = 24/34 (70%), Gaps = 2/34 (5%)

Query: 283 GTVVPVK--QNAEPGWLAGELRGQTGWFPESYVE 314
           G +V V   Q  EPGWL GEL+G+TGWFP +Y E
Sbjct: 21  GDIVMVDESQTGEPGWLGGELKGKTGWFPANYAE 54

Intersectin-1 (ITSN1) is an adaptor protein that functions in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. It plays a role in clathrin-coated pit (CCP) formation. It binds to many proteins through its multidomain structure and facilitate the assembly of multimeric complexes. ITSN1 localizes in membranous organelles, CCPs, the Golgi complex, and may be involved in the cell membrane trafficking system. It exists in alternatively spliced short and long isoforms. The short isoform contains two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoform, in addition, contains RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. The first SH3 domain (or SH3A) of ITSN1 has been shown to bind many proteins including Sos1, dynamin1/2, CIN85, c-Cbl, PI3K-C2, SHIP2, N-WASP, and CdGAP, among others. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212802 cd11869, SH3_p40phox, Src Homology 3 domain of the p40phox subunit of NADPH oxidase

 Score = 46.7 bits (111), Expect = 3e-07
 Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 2/54 (3%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           R  A+++F   +  EL+F+ GD+I +  + N +  WL G +RG TG FP S+V+
Sbjct: 1   RAEALFDFTGNSKLELNFKAGDVIFLLSRVNKD--WLEGTVRGATGIFPLSFVK 52

p40phox, also called Neutrophil cytosol factor 4 (NCF-4), is a cytosolic subunit of the phagocytic NADPH oxidase complex (also called Nox2 or gp91phox) which plays a crucial role in the cellular response to bacterial infection. NADPH oxidase catalyzes the transfer of electrons from NADPH to oxygen during phagocytosis forming superoxide and reactive oxygen species. p40phox positively regulates NADPH oxidase in both phosphatidylinositol-3-phosphate (PI3P)-dependent and PI3P-independent manner. It contains an N-terminal PX domain, a central SH3 domain, and a C-terminal PB1 domain that interacts with p67phox. The SH3 domain of p40phox binds to canonical polyproline and noncanonical motifs at the C-terminus of p47phox. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212892 cd11959, SH3_Cortactin, Src homology 3 domain of Cortactin

 Score = 46.3 bits (110), Expect = 3e-07
 Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 2/51 (3%)

Query: 174 AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           A+Y++ + + DE+SF P DII   ++   E GW  G  RG+ G FP +YVE
Sbjct: 4   ALYDYQAADDDEISFDPDDII-TNIEMIDE-GWWRGVCRGKYGLFPANYVE 52

Cortactin was originally identified as a substrate of Src kinase. It is an actin regulatory protein that binds to the Arp2/3 complex and stabilizes branched actin filaments. It is involved in cellular processes that affect cell motility, adhesion, migration, endocytosis, and invasion. It is expressed ubiquitously except in hematopoietic cells, where the homolog hematopoietic lineage cell-specific 1 (HS1) is expressed instead. Cortactin contains an N-terminal acidic domain, several copies of a repeat domain found in cortactin and HS1, a proline-rich region, and a C-terminal SH3 domain. The N-terminal region interacts with the Arp2/3 complex and F-actin, and is crucial in regulating branched actin assembly. Cortactin also serves as a scaffold and provides a bridge to the actin cytoskeleton for membrane trafficking and signaling proteins that bind to its SH3 domain. Binding partners for the SH3 domain of cortactin include dynamin2, N-WASp, MIM, FGD1, among others. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212775 cd11841, SH3_SH3YL1_like, Src homology 3 domain of SH3 domain containing Ysc84-like 1 (SH3YL1) protein

 Score = 46.2 bits (110), Expect = 4e-07
 Identities = 21/50 (42%), Positives = 30/50 (60%)

Query: 174 AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYV 223
           A+Y F  +   +LSFQ GD I V  + +++  W  G LRG+ G FP +YV
Sbjct: 4   ALYSFEGQQPCDLSFQAGDRITVLTRTDSQFDWWEGRLRGRVGIFPANYV 53

SH3YL1 localizes to the plasma membrane and is required for dorsal ruffle formation. It binds phosphoinositides (PIs) with high affinity through its N-terminal SYLF domain (also called DUF500). In addition, SH3YL1 contains a C-terminal SH3 domain which has been reported to bind to N-WASP, dynamin 2, and SHIP2 (a PI 5-phosphatase). SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212873 cd11940, SH3_ARHGEF5_19, Src homology 3 domain of the Rho guanine nucleotide exchange factors ARHGEF5 and ARHGEF19

 Score = 45.9 bits (109), Expect = 4e-07
 Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 6/54 (11%)

Query: 175 IYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR---GQTGWFPESYVEP 225
           I  + ++  DEL+ +  DIIMV  +Q +  GWL G +R   G+ GWFP+S+VE 
Sbjct: 5   IRSYKAQENDELTLEKADIIMV--RQQSSDGWLEG-VRLSDGERGWFPQSHVEE 55

ARHGEF5, also called ephexin-3 or TIM (Transforming immortalized mammary oncogene), is a potent activator of RhoA and it plays roles in regulating cell shape, adhesion, and migration. It binds to the SH3 domain of Src and is involved in regulating Src-induced podosome formation. ARHGEF19, also called ephexin-2 or WGEF (weak-similarity GEF), is highly expressed in the intestine, liver, heart and kidney. It activates RhoA, Cdc42, and Rac 1, and has been shown to activate RhoA in the Wnt-PCP (planar cell polarity) pathway. It is involved in the regulation of cell polarity and cytoskeletal reorganization. ARHGEF5 and ARHGEF19 contain RhoGEF (also called Dbl-homologous or DH), Pleckstrin Homology (PH), and SH3 domains. The SH3 domains of ARHGEFs play an autoinhibitory role through intramolecular interactions with a proline-rich region N-terminal to the DH domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212712 cd11778, SH3_Bzz1_2, Second Src Homology 3 domain of Bzz1 and similar domains

 Score = 46.0 bits (109), Expect = 4e-07
 Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)

Query: 174 AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESY 222
           A+Y++ ++  DE+S + GD I V ++ +   GW  GE+ G  G FP SY
Sbjct: 4   ALYDYEAQGDDEISIRVGDRIAV-IRGDDGSGWTYGEINGVKGLFPTSY 51

Bzz1 (or Bzz1p) is a WASP/Las17-interacting protein involved in endocytosis and trafficking to the vacuole. It physically interacts with type I myosins and functions in the early steps of endocytosis. Together with other proteins, it induces membrane scission in yeast. Bzz1 contains an N-terminal F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs), a central coiled-coil, and two C-terminal SH3 domains. This model represents the second C-terminal SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 51

>gnl|CDD|212754 cd11820, SH3_STAM, Src homology 3 domain of Signal Transducing Adaptor Molecules

 Score = 45.9 bits (109), Expect = 5e-07
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 2/54 (3%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYV 223
           R+ RA+Y+F +   +EL+F+ G+II   V  +++P W  G      G FP ++V
Sbjct: 1   RKVRALYDFEAAEDNELTFKAGEIIT--VLDDSDPNWWKGSNHRGEGLFPANFV 52

STAMs were discovered as proteins that are highly phosphorylated following cytokine and growth factor stimulation. They function in cytokine signaling and surface receptor degradation, as well as regulate Golgi morphology. They associate with many proteins including Jak2 and Jak3 tyrosine kinases, Hrs, AMSH, and UBPY. STAM adaptor proteins contain VHS (Vps27, Hrs, STAM homology), ubiquitin interacting (UIM), and SH3 domains. There are two vertebrate STAMs, STAM1 and STAM2, which may be functionally redundant; vertebrate STAMs contain ITAM motifs. They are part of the endosomal sorting complex required for transport (ESCRT-0). STAM2 deficiency in mice did not cause any obvious abnormality, while STAM1 deficiency resulted in growth retardation. Loss of both STAM1 and STAM2 in mice proved lethal, indicating that STAMs are important for embryonic development. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212904 cd11971, SH3_Abi1, Src homology 3 domain of Abl Interactor 1

 Score = 46.2 bits (109), Expect = 5e-07
 Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 2/51 (3%)

Query: 174 AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           AIY++     DELSF  G II V +K+N + GW  G   G TG FP +YVE
Sbjct: 4   AIYDYSKDKDDELSFMEGAIIYV-IKKN-DDGWYEGVCNGVTGLFPGNYVE 52

Abi1, also called e3B1, is a central regulator of actin cytoskeletal reorganization through interactions with many protein complexes. It is part of WAVE, a nucleation-promoting factor complex, that links Rac 1 activation to actin polymerization causing lamellipodia protrusion at the plasma membrane. Abi1 interact with formins to promote protrusions at the leading edge of motile cells. It also is a target of alpha4 integrin, regulating membrane protrusions at sites of integrin engagement. Abi proteins are adaptor proteins serving as binding partners and substrates of Abl tyrosine kinases. They are involved in regulating actin cytoskeletal reorganization and play important roles in membrane-ruffling, endocytosis, cell motility, and cell migration. Abi proteins contain a homeobox homology domain, a proline-rich region, and a SH3 domain. The SH3 domain of Abi binds to a PxxP motif in Abl. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 59

>gnl|CDD|212987 cd12054, SH3_CD2AP_2, Second Src Homology 3 domain (SH3B) of CD2-associated protein

 Score = 45.7 bits (108), Expect = 5e-07
 Identities = 21/55 (38%), Positives = 36/55 (65%), Gaps = 2/55 (3%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           R+ + ++E+V +N DEL  + GDII   + +  E GW +G L G++G FP ++V+
Sbjct: 1   RQCKVLFEYVPQNEDELELKVGDII--DINEEVEEGWWSGTLNGKSGLFPSNFVK 53

CD2AP, also called CMS (Cas ligand with Multiple SH3 domains) or METS1 (Mesenchyme-to-Epithelium Transition protein with SH3 domains), is a cytosolic adaptor protein that plays a role in regulating the cytoskeleton. It is critical in cell-to-cell union necessary for kidney function. It also stabilizes the contact between a T cell and antigen-presenting cells. It is primarily expressed in podocytes at the cytoplasmic face of the slit diaphragm and serves as a linker anchoring podocin and nephrin to the actin cytoskeleton. CD2AP contains three SH3 domains, a proline-rich region, and a C-terminal coiled-coil domain. All of these domains enable CD2AP to bind various protein partners and assemble complexes that have been implicated in many different functions. This alignment model represents the second SH3 domain (SH3B) of CD2AP. SH3B binds to c-Cbl in a site (TPSSRPLR is the core binding motif) distinct from the c-Cbl/SH3A binding site. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212700 cd11766, SH3_Nck_2, Second Src Homology 3 domain of Nck adaptor proteins

 Score = 45.7 bits (109), Expect = 5e-07
 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 2/55 (3%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
                + + ++  DELS + GD ++V  K  +  GW  GE  GQ GWFP +YV  
Sbjct: 1   PAVVKFNYEAQREDELSLRKGDRVLVLEK--SSDGWWRGECNGQVGWFPSNYVTE 53

Nck adaptor proteins regulate actin cytoskeleton dynamics by linking proline-rich effector molecules to protein tyrosine kinases and phosphorylated signaling intermediates. They contain three SH3 domains and a C-terminal SH2 domain. They function downstream of the PDGFbeta receptor and are involved in Rho GTPase signaling and actin dynamics. Vertebrates contain two Nck adaptor proteins: Nck1 (also called Nckalpha) and Nck2 (also called Nckbeta or Growth factor receptor-bound protein 4, Grb4), which show partly overlapping functions but also bind distinct targets. Their SH3 domains are involved in recruiting downstream effector molecules, such as the N-WASP/Arp2/3 complex, which when activated induces actin polymerization that results in the production of pedestals, or protrusions of the plasma membrane. The second SH3 domain of Nck appears to prefer ligands containing the APxxPxR motif. SH3 domains are protein interaction domains that usually bind to proline-rich ligands with moderate affinity and selectivity, preferentially a PxxP motif. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212762 cd11828, SH3_ARHGEF9_like, Src homology 3 domain of ARHGEF9-like Rho guanine nucleotide exchange factors

 Score = 45.4 bits (108), Expect = 6e-07
 Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 2/50 (4%)

Query: 174 AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYV 223
           A+++ V+ + +EL F+ GD+I V    + +  W  G +R + GWFP S+V
Sbjct: 4   ALWDHVTMDPEELGFKAGDVIEVLDMSDKD--WWWGSIRDEEGWFPASFV 51

Members of this family contain a SH3 domain followed by RhoGEF (also called Dbl-homologous or DH) and Pleckstrin Homology (PH) domains. They include the Rho guanine nucleotide exchange factors ARHGEF9, ASEF (also called ARHGEF4), ASEF2, and similar proteins. GEFs activate small GTPases by exchanging bound GDP for free GTP. ARHGEF9 specifically activates Cdc42, while both ASEF and ASEF2 can activate Rac1 and Cdc42. ARHGEF9 is highly expressed in the brain and it interacts with gephyrin, a postsynaptic protein associated with GABA and glycine receptors. ASEF plays a role in angiogenesis and cell migration. ASEF2 is important in cell migration and adhesion dynamics. ASEF exists in an autoinhibited form and is activated upon binding of the tumor suppressor APC (adenomatous polyposis coli), leading to the activation of Rac1 or Cdc42. In its autoinhibited form, the SH3 domain of ASEF forms an extensive interface with the DH and PH domains, blocking the Rac binding site. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212746 cd11812, SH3_AHI-1, Src Homology 3 domain of Abelson helper integration site-1 (AHI-1)

 Score = 45.6 bits (108), Expect = 6e-07
 Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 3/51 (5%)

Query: 174 AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL-RGQTGWFPESYV 223
           A+Y++ +   DEL+   GDII V  K N    W  G L  GQ G+FP +YV
Sbjct: 4   ALYDYTANRSDELTIHRGDIIRVLYKDN--DNWWFGSLVNGQQGYFPANYV 52

AHI-1, also called Jouberin, is expressed in high levels in the brain, gonad tissues, and skeletal muscle. It is an adaptor protein that interacts with the small GTPase Rab8a and regulates it distribution and function, affecting cilium formation and vesicle transport. Mutations in the AHI-1 gene can cause Joubert syndrome, a disorder characterized by brainstem malformations, cerebellar aplasia/hypoplasia, and retinal dystrophy. AHI-1 variation is also associated with susceptibility to schizophrenia and type 2 diabetes mellitus progression. AHI-1 contains WD40 and SH3 domains. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 52

>gnl|CDD|212738 cd11804, SH3_GRB2_like_N, N-terminal Src homology 3 domain of Growth factor receptor-bound protein 2 (GRB2) and related proteins

 Score = 45.4 bits (108), Expect = 6e-07
 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYV 223
            A ++F +   DELSF+ G I+ V +    +P W   EL G+ G  P++Y+
Sbjct: 3   VAKHDFKATAEDELSFKKGSILKV-LNMEDDPNWYKAELDGKEGLIPKNYI 52

This family includes the adaptor protein GRB2 and related proteins including Drosophila melanogaster Downstream of receptor kinase (DRK), Caenorhabditis elegans Sex muscle abnormal protein 5 (Sem-5), GRB2-related adaptor protein (GRAP), GRAP2, and similar proteins. Family members contain an N-terminal SH3 domain, a central SH2 domain, and a C-terminal SH3 domain. GRB2/Sem-5/DRK is a critical signaling molecule that regulates the Ras pathway by linking tyrosine kinases to the Ras guanine nucleotide releasing protein Sos (son of sevenless), which converts Ras to the active GTP-bound state. GRAP2 plays an important role in T cell receptor (TCR) signaling by promoting the formation of the SLP-76:LAT complex, which couples the TCR to the Ras pathway. GRAP acts as a negative regulator of T cell receptor (TCR)-induced lymphocyte proliferation by downregulating the signaling to the Ras/ERK pathway. The N-terminal SH3 domain of GRB2 binds to Sos and Sos-derived proline-rich peptides. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 52

>gnl|CDD|215659 pfam00018, SH3_1, SH3 domain

 Score = 45.3 bits (108), Expect = 7e-07
 Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)

Query: 121 IAAYPYDSTEPGDLTFNQDEVIYVTKKEND-WWTG 154
           +A Y Y + EP +L+F + ++I V +K +D WW G
Sbjct: 1   VALYDYTAREPDELSFKKGDIIIVLEKSDDGWWKG 35

SH3 (Src homology 3) domains are often indicative of a protein involved in signal transduction related to cytoskeletal organisation. First described in the Src cytoplasmic tyrosine kinase. The structure is a partly opened beta barrel. Length = 47

>gnl|CDD|212716 cd11782, SH3_Sorbs_2, Second Src Homology 3 domain of Sorbin and SH3 domain containing (Sorbs) proteins and similar domains

 Score = 45.4 bits (108), Expect = 7e-07
 Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 6/54 (11%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMV--PVKQNAEPGWLAGELRGQTGWFPESYVE 224
           RA Y F +  G ELSF+ GD+I +   V +N    W  G + G+ G FP SYV+
Sbjct: 3   RAKYNFNADTGVELSFRKGDVITLTRRVDEN----WYEGRIGGRQGIFPVSYVQ 52

This family, also called the vinexin family, is composed predominantly of adaptor proteins containing one sorbin homology (SoHo) and three SH3 domains. Members include the second SH3 domains of Sorbs1 (or ponsin), Sorbs2 (or ArgBP2), Vinexin (or Sorbs3), and similar domains. They are involved in the regulation of cytoskeletal organization, cell adhesion, and growth factor signaling. Members of this family bind multiple partners including signaling molecules like c-Abl, c-Arg, Sos, and c-Cbl, as well as cytoskeletal molecules such as vinculin and afadin. They may have overlapping functions. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212931 cd11998, SH3_PACSIN1-2, Src homology 3 domain of Protein kinase C and Casein kinase Substrate in Neurons 1 (PACSIN1) and PACSIN 2

 Score = 45.3 bits (107), Expect = 7e-07
 Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 2/56 (3%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL-RGQTGWFPESYVEP 225
           R RA+Y++  +  DELSF+ GD  +  ++   E GW  G L  GQ G +P +YVEP
Sbjct: 2   RVRALYDYDGQEQDELSFKAGD-ELTKLEDEDEQGWCKGRLDSGQVGLYPANYVEP 56

PACSIN 1 or Syndapin I (Synaptic dynamin-associated protein I) is expressed specifically in the brain and is localized in neurites and synaptic boutons. It binds the brain-specific proteins dynamin I, synaptojanin, synapsin I, and neural Wiskott-Aldrich syndrome protein (nWASP), and functions as a link between the cytoskeletal machinery and synaptic vesicle endocytosis. PACSIN 1 interacts with huntingtin and may be implicated in the neuropathology of Huntington's disease. PACSIN 2 or Syndapin II is expressed ubiquitously and is involved in the regulation of tubulin polymerization. It associates with Golgi membranes and forms a complex with dynamin II which is crucial in promoting vesicle formation from the trans-Golgi network. PACSINs act as regulators of cytoskeletal and membrane dynamics. Vetebrates harbor three isoforms with distinct expression patterns and specific functions. PACSINs contain an N-terminal F-BAR domain and a C-terminal SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 56

>gnl|CDD|212807 cd11874, SH3_CD2AP-like_2, Second Src Homology 3 domain (SH3B) of CD2-associated protein and similar proteins

 Score = 45.4 bits (108), Expect = 7e-07
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 2/54 (3%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           R + ++ +  +N DEL  + GD I V + +  E GW  G+L G+ G FP ++V+
Sbjct: 1   RCKVLFSYTPQNEDELELKVGDTIEV-LGE-VEEGWWEGKLNGKVGVFPSNFVK 52

This subfamily is composed of the second SH3 domain (SH3B) of CD2AP, CIN85 (Cbl-interacting protein of 85 kDa), and similar domains. CD2AP and CIN85 are adaptor proteins that bind to protein partners and assemble complexes that have been implicated in T cell activation, kidney function, and apoptosis of neuronal cells. They also associate with endocytic proteins, actin cytoskeleton components, and other adaptor proteins involved in receptor tyrosine kinase (RTK) signaling. CD2AP and the main isoform of CIN85 contain three SH3 domains, a proline-rich region, and a C-terminal coiled-coil domain. All of these domains enable CD2AP and CIN85 to bind various protein partners and assemble complexes that have been implicated in many different functions. SH3B of both proteins have been shown to bind to Cbl. In the case of CD2AP, its SH3B binds to Cbl at a site distinct from the c-Cbl/SH3A binding site. The CIN85 SH3B also binds ubiquitin. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|213001 cd12068, SH3_MYO15B, Src Homology 3 domain of Myosin XVb

 Score = 45.3 bits (107), Expect = 8e-07
 Identities = 18/52 (34%), Positives = 28/52 (53%)

Query: 174 AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
           A+  +++ +   LSF  GD+I +      EPGW  G   G++G FP   V+P
Sbjct: 4   ALRSYITDDKSLLSFHRGDLIKLLPMAGLEPGWQFGSTGGRSGLFPADIVQP 55

Myosin XVb, also called KIAA1783, was named based on its similarity with myosin XVa. It is a transcribed and unprocessed pseudogene whose predicted amino acid sequence contains mutated or deleted amino acid residues that are normally conserved and important for myosin function. The related myosin XVa is important for normal growth of mechanosensory stereocilia of inner ear hair cells. Myosin XVa contains a unique N-terminal extension followed by a motor domain, light chain-binding IQ motifs, and a tail consisting of a pair of MyTH4-FERM tandems separated by a SH3 domain, and a PDZ domain. SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies. Length = 55

>gnl|CDD|212954 cd12021, SH3_p47phox_1, First or N-terminal Src homology 3 domain of the p47phox subunit of NADPH oxidase, also called Neutrophil Cytosolic Factor 1

 Score = 45.3 bits (107), Expect = 8e-07
 Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 2/54 (3%)

Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
           YRAI ++   +  E++ + GD  +V V + +E GW   +L+ + GW P SY+EP
Sbjct: 2   YRAIADYEKSSKSEMALKTGD--VVEVVEKSENGWWFCQLKAKRGWVPASYLEP 53

p47phox, or NCF1, is a cytosolic subunit of the phagocytic NADPH oxidase complex (also called Nox2 or gp91phox), which plays a key role in the ability of phagocytes to defend against bacterial infections. NADPH oxidase catalyzes the transfer of electrons from NADPH to oxygen during phagocytosis forming superoxide and reactive oxygen species. p47phox is required for activation of NADH oxidase and plays a role in translocation. It contains an N-terminal Phox homology (PX) domain, tandem SH3 domains (N-SH3 and C-SH3), a polybasic/autoinhibitory region, and a C-terminal proline-rich region (PRR). This model characterizes the first SH3 domain (or N-SH3) of p47phox. In its inactive state, the tandem SH3 domains interact intramolecularly with the autoinhibitory region; upon activation, the tandem SH3 domains are exposed through a conformational change, resulting in their binding to the PRR of p22phox and the activation of NADPH oxidase. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212853 cd11920, SH3_Sorbs2_1, First Src Homology 3 domain of Sorbin and SH3 domain containing 2 (Sorbs2), also called Arg-binding protein 2 (ArgBP2)

 Score = 45.0 bits (106), Expect = 9e-07
 Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 2/52 (3%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           RA+Y+F ++   ELSF+ GD + +  K   +  W  GE  G+ G FP SYVE
Sbjct: 4   RAVYDFKAQTSKELSFKKGDTVYILRK--IDQNWYEGEHHGRVGIFPISYVE 53

Sorbs2 or ArgBP2 is an adaptor protein containing one sorbin homology (SoHo) and three SH3 domains. It regulates actin-dependent processes including cell adhesion, morphology, and migration. It is expressed in many tissues and is abundant in the heart. Like vinexin, it is found in focal adhesion where it interacts with vinculin and afadin. It also localizes in epithelial cell stress fibers and in cardiac muscle cell Z-discs. Sorbs2 has been implicated to play roles in the signaling of c-Arg, Akt, and Pyk2. Other interaction partners of Sorbs2 include c-Abl, flotillin, spectrin, dynamin 1/2, synaptojanin, PTP-PEST, among others. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212897 cd11964, SH3_STAM1, Src homology 3 domain of Signal Transducing Adaptor Molecule 1

 Score = 44.9 bits (106), Expect = 9e-07
 Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 2/54 (3%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYV 223
           R+ RAIY+F +   +EL+F+ GDII   +  +++P W  GE    TG FP ++V
Sbjct: 1   RKVRAIYDFEAAEDNELTFKAGDII--TILDDSDPNWWKGETPQGTGLFPSNFV 52

STAM1 is part of the endosomal sorting complex required for transport (ESCRT-0) and is involved in sorting ubiquitinated cargo proteins from the endosome. It may also be involved in the regulation of IL2 and GM-CSF mediated signaling, and has been implicated in neural cell survival. STAMs were discovered as proteins that are highly phosphorylated following cytokine and growth factor stimulation. They function in cytokine signaling and surface receptor degradation, as well as regulate Golgi morphology. They associate with many proteins including Jak2 and Jak3 tyrosine kinases, Hrs, AMSH, and UBPY. STAM adaptor proteins contain VHS (Vps27, Hrs, STAM homology), ubiquitin interacting (UIM), and SH3 domains. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212724 cd11790, SH3_Amphiphysin, Src Homology 3 domain of Amphiphysin and related domains

 Score = 45.4 bits (108), Expect = 9e-07
 Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 9/62 (14%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMV-----PVKQNAEPGWLAG--ELRGQTGWFPESYV 223
           + RA +++ + + DEL+F+ GD+I+V     P +Q  + GWL G  E  G  G FPE++ 
Sbjct: 4   KVRATHDYTAEDTDELTFEKGDVILVIPFDDPEEQ--DEGWLMGVKESTGCRGVFPENFT 61

Query: 224 EP 225
           E 
Sbjct: 62  ER 63

Amphiphysins function primarily in endocytosis and other membrane remodeling events. They exist in several isoforms and mammals possess two amphiphysin proteins from distinct genes. Amphiphysin I proteins, enriched in the brain and nervous system, contain domains that bind clathrin, Adaptor Protein complex 2 (AP2), dynamin, and synaptojanin. They function in synaptic vesicle endocytosis. Human autoantibodies to amphiphysin I hinder GABAergic signaling and contribute to the pathogenesis of paraneoplastic stiff-person syndrome. Some amphiphysin II isoforms, also called Bridging integrator 1 (Bin1), are localized in many different tissues and may function in intracellular vesicle trafficking. In skeletal muscle, Bin1 plays a role in the organization and maintenance of the T-tubule network. Mutations in Bin1 are associated with autosomal recessive centronuclear myopathy. Amphiphysins contain an N-terminal BAR domain with an additional N-terminal amphipathic helix (an N-BAR), a variable central domain, and a C-terminal SH3 domain. The SH3 domain of amphiphysins bind proline-rich motifs present in binding partners such as dynamin, synaptojanin, and nsP3. It also belongs to a subset of SH3 domains that bind ubiquitin in a site that overlaps with the peptide binding site. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 64

>gnl|CDD|212776 cd11842, SH3_Ysc84p_like, Src homology 3 domain of Ysc84p and similar fungal proteins

 Score = 44.3 bits (105), Expect = 1e-06
 Identities = 20/52 (38%), Positives = 31/52 (59%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
            A+Y+F      +L+FQ GDII +  K +++  W  G + G+ G FP +YVE
Sbjct: 3   VALYDFAGEQPGDLAFQKGDIITILKKSDSQNDWWTGRIGGREGIFPANYVE 54

This family is composed of the Saccharomyces cerevisiae proteins, Ysc84p (also called LAS17-binding protein 4, Lsb4p) and Lsb3p, and similar fungal proteins. They contain an N-terminal SYLF domain (also called DUF500) and a C-terminal SH3 domain. Ysc84p localizes to actin patches and plays an important in actin polymerization during endocytosis. The N-terminal domain of both Ysc84p and Lsb3p can bind and bundle actin filaments. A study of the yeast SH3 domain interactome predicts that the SH3 domains of Lsb3p and Lsb4p may function as molecular hubs for the assembly of endocytic complexes. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212998 cd12065, SH3_GRAF2, Src Homology 3 domain of GTPase Regulator Associated with Focal adhesion kinase 2

 Score = 45.0 bits (106), Expect = 1e-06
 Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 1/52 (1%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           +A+Y   + +  ELSF+ G I    V  + EPGWL G L G+ G  PE+YVE
Sbjct: 3   KAVYPCEAEHSSELSFEVGAIFE-DVTLSREPGWLEGTLNGKRGLIPENYVE 53

GRAF2, also called Rho GTPase activating protein 10 (ARHGAP10) or PS-GAP, is a GAP with activity towards Cdc42 and RhoA. It regulates caspase-activated p21-activated protein kinase-2 (PAK-2p34). GRAF2 interacts with PAK-2p34, leading to its stabilization and decrease of cell death. It is highly expressed in skeletal muscle, and is involved in alpha-catenin recruitment at cell-cell junctions. GRAF2 contains an N-terminal BAR domain, followed by a Pleckstrin homology (PH) domain, a Rho GAP domain, and a C-terminal SH3 domain. The SH3 domain of GRAF binds PKNbeta, a target of the small GTPase Rho. SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies. Length = 54

>gnl|CDD|212922 cd11989, SH3_Intersectin1_2, Second Src homology 3 domain (or SH3B) of Intersectin-1

 Score = 44.7 bits (105), Expect = 1e-06
 Identities = 20/52 (38%), Positives = 34/52 (65%), Gaps = 3/52 (5%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           +A+Y + ++  + L+F   D+I V  +Q+    W  GE++GQ GWFP+SYV+
Sbjct: 3   QALYPWRAKKDNHLNFNKNDVITVLEQQDM---WWFGEVQGQKGWFPKSYVK 51

Intersectin-1 (ITSN1) is an adaptor protein that functions in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. It plays a role in clathrin-coated pit (CCP) formation. It binds to many proteins through its multidomain structure and facilitate the assembly of multimeric complexes. ITSN1 localizes in membranous organelles, CCPs, the Golgi complex, and may be involved in the cell membrane trafficking system. It exists in alternatively spliced short and long isoforms. The short isoform contains two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoform, in addition, contains RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. The second SH3 domain (or SH3B) of ITSN1 has been shown to bind WNK and CdGAP. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 52

>gnl|CDD|212730 cd11796, SH3_DNMBP_N3, Third N-terminal Src homology 3 domain of Dynamin Binding Protein, also called Tuba

 Score = 44.7 bits (106), Expect = 1e-06
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYV 223
           + R + +  ++  +EL  + GD++ +      + GW  GEL G+ G FPE +V
Sbjct: 1   QARVLQDLSAQLDEELDLREGDVVTI--TGILDKGWFRGELNGRRGIFPEGFV 51

DNMBP or Tuba is a cdc42-specific guanine nucleotide exchange factor (GEF) that contains four N-terminal SH3 domains, a central RhoGEF [or Dbl homology (DH)] domain followed by a Bin/Amphiphysin/Rvs (BAR) domain, and two C-terminal SH3 domains. It provides a functional link between dynamin and key regulatory proteins of the actin cytoskeleton. It plays an important role in regulating cell junction configuration. The four N-terminal SH3 domains of DNMBP binds the GTPase dynamin, which plays an important role in the fission of endocytic vesicles. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 51

>gnl|CDD|212852 cd11919, SH3_Sorbs1_1, First Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin

 Score = 44.6 bits (105), Expect = 1e-06
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           R  RA ++F ++   EL  Q GDI+ +   +  +  W  GE  G+ G FP SY+E
Sbjct: 1   RPARAKFDFKAQTLKELPLQKGDIVYI--YKQIDQNWYEGEHHGRVGIFPRSYIE 53

Sorbs1 is also called ponsin, SH3P12, or CAP (c-Cbl associated protein). It is an adaptor protein containing one sorbin homology (SoHo) and three SH3 domains. It binds Cbl and plays a major role in regulating the insulin signaling pathway by enhancing insulin-induced phosphorylation of Cbl. Sorbs1, like vinexin, localizes at cell-ECM and cell-cell adhesion sites where it binds vinculin, paxillin, and afadin. It may function in the control of cell motility. Other interaction partners of Sorbs1 include c-Abl, Sos, flotillin, Grb4, ataxin-7, filamin C, among others. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212986 cd12053, SH3_CD2AP_1, First Src Homology 3 domain (SH3A) of CD2-associated protein

 Score = 44.4 bits (105), Expect = 1e-06
 Identities = 21/49 (42%), Positives = 34/49 (69%), Gaps = 1/49 (2%)

Query: 176 YEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           Y++ + + DEL+ + G+II   VK+  E GWL GEL G+ G FP+++V+
Sbjct: 6   YDYDAVHEDELTIRVGEIIR-NVKKLEEEGWLEGELNGRRGMFPDNFVK 53

CD2AP, also called CMS (Cas ligand with Multiple SH3 domains) or METS1 (Mesenchyme-to-Epithelium Transition protein with SH3 domains), is a cytosolic adaptor protein that plays a role in regulating the cytoskeleton. It is critical in cell-to-cell union necessary for kidney function. It also stabilizes the contact between a T cell and antigen-presenting cells. It is primarily expressed in podocytes at the cytoplasmic face of the slit diaphragm and serves as a linker anchoring podocin and nephrin to the actin cytoskeleton. CD2AP contains three SH3 domains, a proline-rich region, and a C-terminal coiled-coil domain. All of these domains enable CD2AP to bind various protein partners and assemble complexes that have been implicated in many different functions. This alignment model represents the first SH3 domain (SH3A) of CD2AP. SH3A binds to the PXXXPR motif present in c-Cbl and the cytoplasmic domain of cell adhesion protein CD2. Its interaction with CD2 anchors CD2 at sites of cell contact. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 56

>gnl|CDD|212921 cd11988, SH3_Intersectin2_1, First Src homology 3 domain (or SH3A) of Intersectin-2

 Score = 44.1 bits (104), Expect = 2e-06
 Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 2/34 (5%)

Query: 283 GTVVPVKQN--AEPGWLAGELRGQTGWFPESYVE 314
           G ++ V +    EPGWL G  +G  GWFP +YVE
Sbjct: 23  GDIIQVDEKTVGEPGWLYGSFQGNFGWFPCNYVE 56

Intersectin-2 (ITSN2) is an adaptor protein that functions in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. It plays a role in clathrin-coated pit (CCP) formation. It binds to many proteins through its multidomain structure and facilitate the assembly of multimeric complexes. ITSN2 also functions as a specific GEF for Cdc42 activation in epithelial morphogenesis, and is required in mitotic spindle orientation. It exists in alternatively spliced short and long isoforms. The short isoform contains two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoform, in addition, contains RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. The first SH3 domain (or SH3A) of ITSN2 is expected to bind many protein partners, similar to ITSN1 which has been shown to bind Sos1, dynamin1/2, CIN85, c-Cbl, PI3K-C2, SHIP2, N-WASP, and CdGAP, among others. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 57

>gnl|CDD|212817 cd11884, SH3_MYO15, Src Homology 3 domain of Myosin XV

 Score = 44.2 bits (105), Expect = 2e-06
 Identities = 14/32 (43%), Positives = 22/32 (68%)

Query: 284 TVVPVKQNAEPGWLAGELRGQTGWFPESYVEP 315
            ++P +   +PGWL G L G++G FP+ YV+P
Sbjct: 25  KLLPKEGPLDPGWLFGTLDGRSGAFPKEYVQP 56

This subfamily is composed of proteins with similarity to Myosin XVa. Myosin XVa is an unconventional myosin that is critical for the normal growth of mechanosensory stereocilia of inner ear hair cells. Mutations in the myosin XVa gene are associated with nonsyndromic hearing loss. Myosin XVa contains a unique N-terminal extension followed by a motor domain, light chain-binding IQ motifs, and a tail consisting of a pair of MyTH4-FERM tandems separated by a SH3 domain, and a PDZ domain. SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies. Length = 56

>gnl|CDD|212760 cd11826, SH3_Abi, Src homology 3 domain of Abl Interactor proteins

 Score = 44.2 bits (105), Expect = 2e-06
 Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)

Query: 121 IAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTARFRG 165
           +A Y Y + +  +L+F + ++IYVTKK ++ W+ G +   T  F G
Sbjct: 3   VALYDYTADKDDELSFQEGDIIYVTKKNDDGWYEGVLNGVTGLFPG 48

Abl interactor (Abi) proteins are adaptor proteins serving as binding partners and substrates of Abl tyrosine kinases. They are involved in regulating actin cytoskeletal reorganization and play important roles in membrane-ruffling, endocytosis, cell motility, and cell migration. They localize to sites of actin polymerization in epithelial adherens junction and immune synapses, as well as to the leading edge of lamellipodia. Vertebrates contain two Abi proteins, Abi1 and Abi2. Abi1 displays a wide expression pattern while Abi2 is highly expressed in the eye and brain. Abi proteins contain a homeobox homology domain, a proline-rich region, and a SH3 domain. The SH3 domain of Abi binds to a PxxP motif in Abl. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 52

>gnl|CDD|212894 cd11961, SH3_Abp1_fungi_C2, Second C-terminal Src homology 3 domain of Fungal Actin-binding protein 1

 Score = 44.4 bits (105), Expect = 2e-06
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 8/55 (14%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAE---PGWLAGELRGQTGWFPESYVE 224
           +A+Y++ +   +ELSF   D I+     N E     W  GE  G  G FP +YVE
Sbjct: 3   KALYDYDAAEDNELSFFENDKII-----NIEFVDDDWWLGECHGSRGLFPSNYVE 52

Abp1 is an adaptor protein that functions in receptor-mediated endocytosis and vesicle trafficking. It contains an N-terminal actin-binding module, the actin-depolymerizing factor (ADF) homology domain, a central proline-rich region, and a C-terminal SH3 domain (many yeast Abp1 proteins contain two C-terminal SH3 domains). Yeast Abp1 also contains two acidic domains that bind directly to the Arp2/3 complex, which is required to initiate actin polymerization. The SH3 domain of yeast Abp1 binds and localizes the kinases, Ark1p and Prk1p, which facilitate actin patch disassembly following vesicle internalization. It also mediates the localization to the actin patch of the synaptojanin-like protein, Sjl2p, which plays a key role in endocytosis. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212866 cd11933, SH3_Nebulin_C, C-terminal Src Homology 3 domain of Nebulin

 Score = 44.2 bits (104), Expect = 2e-06
 Identities = 23/57 (40%), Positives = 38/57 (66%), Gaps = 4/57 (7%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR--GQTGWFPESYVE 224
           + +RA+Y++ + + DE+SF+ GD I V V Q  + GW+ G ++  G+TG  P +YVE
Sbjct: 2   KSFRAMYDYRAADDDEVSFKDGDTI-VNV-QTIDEGWMYGTVQRTGKTGMLPANYVE 56

Nebulin is a giant filamentous protein (600-900 kD) that is expressed abundantly in skeletal muscle. It binds to actin thin filaments and regulates its assembly and function. Nebulin was thought to be part of a molecular ruler complex that is critical in determining the lengths of actin thin filaments in skeletal muscle since its length, which varies due to alternative splicing, correlates with the length of thin filaments in various muscle types. Recent studies indicate that nebulin regulates thin filament length by stabilizing the filaments and preventing depolymerization. Mutations in nebulin can cause nemaline myopathy, characterized by muscle weakness which can be severe and can lead to neonatal lethality. Nebulin contains an N-terminal LIM domain, many nebulin repeats/super repeats, and a C-terminal SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 58

>gnl|CDD|212790 cd11856, SH3_p47phox_like, Src homology 3 domains of the p47phox subunit of NADPH oxidase and similar domains

 Score = 44.2 bits (105), Expect = 2e-06
 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 2/54 (3%)

Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
           Y AI ++ ++  DE+S Q G++  V V +  + GW       + GW P SY+EP
Sbjct: 2   YVAIADYEAQGDDEISLQEGEV--VEVLEKNDSGWWYVRKGDKEGWVPASYLEP 53

This family is composed of the tandem SH3 domains of p47phox subunit of NADPH oxidase and Nox Organizing protein 1 (NoxO1), the four SH3 domains of Tks4 (Tyr kinase substrate with four SH3 domains), the five SH3 domains of Tks5, the SH3 domain of obscurin, Myosin-I, and similar domains. Most members of this group also contain Phox homology (PX) domains, except for obscurin and Myosin-I. p47phox and NoxO1 are regulators of the phagocytic NADPH oxidase complex (also called Nox2 or gp91phox) and nonphagocytic NADPH oxidase Nox1, respectively. They play roles in the activation of their respective NADPH oxidase, which catalyzes the transfer of electrons from NADPH to molecular oxygen to form superoxide. Tks proteins are Src substrates and scaffolding proteins that play important roles in the formation of podosomes and invadopodia, the dynamic actin-rich structures that are related to cell migration and cancer cell invasion. Obscurin is a giant muscle protein that plays important roles in the organization and assembly of the myofibril and the sarcoplasmic reticulum. Type I myosins (Myosin-I) are actin-dependent motors in endocytic actin structures and actin patches. They play roles in membrane traffic in endocytic and secretory pathways, cell motility, and mechanosensing. Myosin-I contains an N-terminal actin-activated ATPase, a phospholipid-binding TH1 (tail homology 1) domain, and a C-terminal extension which includes an F-actin-binding TH2 domain, an SH3 domain, and an acidic peptide that participates in activating the Arp2/3complex. The SH3 domain of myosin-I is required for myosin-I-induced actin polymerization. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212753 cd11819, SH3_Cortactin_like, Src homology 3 domain of Cortactin and related proteins

 Score = 43.8 bits (104), Expect = 2e-06
 Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 3/53 (5%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR-GQTGWFPESYVE 224
           +A+Y++ +   +E+SF  GDII   ++Q  E GW  G    GQ G FP +YVE
Sbjct: 3   KALYDYQAAEDNEISFVEGDII-TQIEQIDE-GWWLGVNAKGQKGLFPANYVE 53

This subfamily includes cortactin, Abp1 (actin-binding protein 1), hematopoietic lineage cell-specific protein 1 (HS1), and similar proteins. These proteins are involved in regulating actin dynamics through direct or indirect interaction with the Arp2/3 complex, which is required to initiate actin polymerization. They all contain at least one C-terminal SH3 domain. Cortactin and HS1 bind Arp2/3 and actin through an N-terminal region that contains an acidic domain and several copies of a repeat domain found in cortactin and HS1. Abp1 binds actin via an N-terminal actin-depolymerizing factor (ADF) homology domain. Yeast Abp1 binds Arp2/3 directly through two acidic domains. Mammalian Abp1 does not directly interact with Arp2/3; instead, it regulates actin dynamics indirectly by interacting with dynamin and WASP family proteins. The C-terminal region of these proteins acts as an adaptor or scaffold that can connect membrane trafficking and signaling proteins that bind the SH3 domain within the actin network. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212803 cd11870, SH3_p67phox-like_C, C-terminal Src Homology 3 domain of the p67phox subunit of NADPH oxidase and similar proteins

 Score = 43.7 bits (103), Expect = 2e-06
 Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 2/52 (3%)

Query: 174 AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
           A++ + ++  ++L F+ GD I V  + N    WL G   G+ G FP+ +V P
Sbjct: 4   ALHRYEAQGPEDLGFREGDTIDVLSEVNEA--WLEGHSDGRVGIFPKCFVVP 53

This subfamily is composed of p67phox, NADPH oxidase activator 1 (Noxa1), and similar proteins. p67phox, also called Neutrophil cytosol factor 2 (NCF-2), and Noxa1 are homologs and are the cytosolic subunits of the phagocytic (Nox2) and nonphagocytic (Nox1) NADPH oxidase complexes, respectively. NADPH oxidase catalyzes the transfer of electrons from NADPH to oxygen during phagocytosis forming superoxide and reactive oxygen species. p67phox and Noxa1 play regulatory roles. p67phox contains N-terminal TPR, first SH3 (or N-terminal or central SH3), PB1, and C-terminal SH3 domains. Noxa1 has a similar domain architecture except it is lacking the N-terminal SH3 domain. The TPR domain of both binds activated GTP-bound Rac, while the C-terminal SH3 domain of p67phox and Noxa1 binds the polyproline motif found at the C-terminus of p47phox and Noxo1, respectively. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212759 cd11825, SH3_PLCgamma, Src homology 3 domain of Phospholipase C (PLC) gamma

 Score = 43.9 bits (104), Expect = 2e-06
 Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 3/53 (5%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQ-TGWFPESYVE 224
           +A+Y++ ++  DELSF    II    K++   GW  G+  G+   WFP +YVE
Sbjct: 3   KALYDYRAQRPDELSFCKHAIITNVEKEDG--GWWRGDYGGKKQKWFPANYVE 53

PLC catalyzes the hydrolysis of phosphatidylinositol (4,5)-bisphosphate [PtdIns(4,5)P2] to produce Ins(1,4,5)P3 and diacylglycerol (DAG) in response to various receptors. Ins(1,4,5)P3 initiates the calcium signaling cascade while DAG functions as an activator of PKC. PLCgamma catalyzes this reaction in tyrosine kinase-dependent signaling pathways. It is activated and recruited to its substrate at the membrane. Vertebrates contain two forms of PLCgamma, PLCgamma1, which is widely expressed, and PLCgamma2, which is primarily found in haematopoietic cells. PLCgamma contains a Pleckstrin homology (PH) domain followed by an elongation factor (EF) domain, two catalytic regions of PLC domains that flank two tandem SH2 domains, followed by a SH3 domain and C2 domain. The SH3 domain of PLCgamma1 directly interacts with dynamin-1 and can serve as a guanine nucleotide exchange factor (GEF). It also interacts with Cbl, inhibiting its phosphorylation and activity. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212739 cd11805, SH3_GRB2_like_C, C-terminal Src homology 3 domain of Growth factor receptor-bound protein 2 (GRB2) and related proteins

 Score = 43.4 bits (103), Expect = 3e-06
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 122 AAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTIGDRTARF 163
           A Y ++  EPG+L F + ++I V    + DWW G +  R   F
Sbjct: 4   ALYDFNPQEPGELEFRRGDIITVLDSSDPDWWKGELRGRVGIF 46

This family includes the adaptor protein GRB2 and related proteins including Drosophila melanogaster Downstream of receptor kinase (DRK), Caenorhabditis elegans Sex muscle abnormal protein 5 (Sem-5), GRB2-related adaptor protein (GRAP), GRAP2, and similar proteins. Family members contain an N-terminal SH3 domain, a central SH2 domain, and a C-terminal SH3 domain. GRB2/Sem-5/DRK is a critical signaling molecule that regulates the Ras pathway by linking tyrosine kinases to the Ras guanine nucleotide releasing protein Sos (son of sevenless), which converts Ras to the active GTP-bound state. GRAP2 plays an important role in T cell receptor (TCR) signaling by promoting the formation of the SLP-76:LAT complex, which couples the TCR to the Ras pathway. GRAP acts as a negative regulator of T cell receptor (TCR)-induced lymphocyte proliferation by downregulating the signaling to the Ras/ERK pathway. The C-terminal SH3 domains (SH3c) of GRB2 and GRAP2 have been shown to bind to classical PxxP motif ligands, as well as to non-classical motifs. GRB2 SH3c binds Gab2 (Grb2-associated binder 2) through epitopes containing RxxK motifs, while the SH3c of GRAP2 binds to the phosphatase-like protein HD-PTP via a RxxxxK motif. SH3 domains are protein interaction domains that typically bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212923 cd11990, SH3_Intersectin2_2, Second Src homology 3 domain (or SH3B) of Intersectin-2

 Score = 43.5 bits (102), Expect = 3e-06
 Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 3/52 (5%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           +A+  + ++  + L+F   DII V  +Q     W  GE+ G  GWFP+SYV+
Sbjct: 3   QALCSWTAKKDNHLNFSKNDIITVLEQQE---NWWFGEVHGGRGWFPKSYVK 51

Intersectin-2 (ITSN2) is an adaptor protein that functions in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. It plays a role in clathrin-coated pit (CCP) formation. It binds to many proteins through its multidomain structure and facilitate the assembly of multimeric complexes. ITSN2 also functions as a specific GEF for Cdc42 activation in epithelial morphogenesis, and is required in mitotic spindle orientation. It exists in alternatively spliced short and long isoforms. The short isoform contains two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoform, in addition, contains RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. The second SH3 domain (or SH3B) of ITSN2 is expected to bind protein partners, similar to ITSN1 which has been shown to bind WNK and CdGAP. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 52

>gnl|CDD|212725 cd11791, SH3_UBASH3, Src homology 3 domain of Ubiquitin-associated and SH3 domain-containing proteins, also called TULA (T cell Ubiquitin LigAnd) family of proteins

 Score = 43.8 bits (104), Expect = 3e-06
 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 4/57 (7%)

Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQ--NAEPGWLAG--ELRGQTGWFPESYVE 224
            R +Y +  +  DEL   PGD I V  ++  ++  GW+ G   L G +G  PE+Y E
Sbjct: 2   LRVLYPYTPQEEDELELVPGDYIYVSPEELDSSSDGWVEGTSWLTGCSGLLPENYTE 58

UBASH3 or TULA proteins are also referred to as Suppressor of T cell receptor Signaling (STS) proteins. They contain an N-terminal UBA domain, a central SH3 domain, and a C-terminal histidine phosphatase domain. They bind c-Cbl through the SH3 domain and to ubiquitin via UBA. In some vertebrates, there are two TULA family proteins, called UBASH3A (also called TULA or STS-2) and UBASH3B (also called TULA-2 or STS-1), which show partly overlapping as well as distinct functions. UBASH3B is widely expressed while UBASH3A is only found in lymphoid cells. UBASH3A facilitates apoptosis induced in T cells through its interaction with the apoptosis-inducing factor AIF. UBASH3B is an active phosphatase while UBASH3A is not. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 59

>gnl|CDD|212930 cd11997, SH3_PACSIN3, Src homology 3 domain of Protein kinase C and Casein kinase Substrate in Neurons 3 (PACSIN3)

 Score = 43.8 bits (103), Expect = 3e-06
 Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR-GQTGWFPESYVE 224
           R RA+Y++  +  DELSF+ G+ ++  + +  E GW  G L  G+ G +P +YVE
Sbjct: 3   RVRALYDYTGQEADELSFKAGEELL-KIGEEDEQGWCKGRLLSGRIGLYPANYVE 56

PACSIN 3 or Syndapin III (Synaptic dynamin-associated protein III) is expressed ubiquitously and regulates glucose uptake in adipocytes through its role in GLUT1 trafficking. It also modulates the subcellular localization and stimulus-specific function of the cation channel TRPV4. PACSINs act as regulators of cytoskeletal and membrane dynamics. Vetebrates harbor three isoforms with distinct expression patterns and specific functions. PACSINs contain an N-terminal F-BAR domain and a C-terminal SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 56

>gnl|CDD|212918 cd11985, SH3_Stac2_C, C-terminal Src homology 3 domain of SH3 and cysteine-rich domain-containing protein 2 (Stac2)

 Score = 43.4 bits (102), Expect = 3e-06
 Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 2/53 (3%)

Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           Y A+Y+F+ +  ++L  QPGD +MV    N +  W  G+   + G+FP ++V+
Sbjct: 2   YVALYKFLPQENNDLPLQPGDRVMVVDDSNED--WWKGKSGDRVGFFPANFVQ 52

Stac proteins are putative adaptor proteins that contain a cysteine-rich C1 domain and one or two SH3 domains at the C-terminus. There are three mammalian members (Stac1, Stac2, and Stac3) of this family. Stac2 contains a single SH3 domain at the C-terminus unlike Stac1 and Stac3, which contain two C-terminal SH3 domains. Stac1 and Stac2 have been found to be expressed differently in mature dorsal root ganglia (DRG) neurons. Stac1 is mainly expressed in peptidergic neurons while Stac2 is found in a subset of nonpeptidergic and all trkB+ neurons. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212751 cd11817, SH3_Eve1_4, Fourth Src homology 3 domain of ADAM-binding protein Eve-1

 Score = 43.2 bits (102), Expect = 3e-06
 Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%)

Query: 174 AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESY 222
           A+Y+F     ++LSFQ GD I+V    +AE  W  G L G+ G FP ++
Sbjct: 4   ALYDFTGETEEDLSFQRGDRILVTEHLDAE--WSRGRLNGREGIFPRAF 50

Eve-1, also called SH3 domain-containing protein 19 (SH3D19) or EEN-binding protein (EBP), exists in multiple alternatively spliced isoforms. The longest isoform contains five SH3 domain in the C-terminal region and seven proline-rich motifs in the N-terminal region. It is abundantly expressed in skeletal muscle and heart, and may be involved in regulating the activity of ADAMs (A disintegrin and metalloproteases). Eve-1 interacts with EEN, an endophilin involved in endocytosis and may be the target of the MLL-EEN fusion protein that is implicated in leukemogenesis. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 50

>gnl|CDD|212849 cd11916, SH3_Sorbs1_3, Third (or C-terminal) Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin

 Score = 43.4 bits (102), Expect = 4e-06
 Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 4/56 (7%)

Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR--GQTGWFPESYVEP 225
           Y+A+Y +  +N DEL  + GDI  V V +  + GW  G  R   Q G FP +YV+ 
Sbjct: 4   YQALYSYAPQNDDELELRDGDI--VDVMEKCDDGWFVGTSRRTKQFGTFPGNYVKL 57

Sorbs1 is also called ponsin, SH3P12, or CAP (c-Cbl associated protein). It is an adaptor protein containing one sorbin homology (SoHo) and three SH3 domains. It binds Cbl and plays a major role in regulating the insulin signaling pathway by enhancing insulin-induced phosphorylation of Cbl. Sorbs1, like vinexin, localizes at cell-ECM and cell-cell adhesion sites where it binds vinculin, paxillin, and afadin. It may function in the control of cell motility. Other interaction partners of Sorbs1 include c-Abl, Sos, flotillin, Grb4, ataxin-7, filamin C, among others. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 59

>gnl|CDD|212740 cd11806, SH3_PRMT2, Src homology 3 domain of Protein arginine N-methyltransferase 2

 Score = 43.1 bits (102), Expect = 4e-06
 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 2/54 (3%)

Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
           Y AI +FV+ +  +LSF+ GD ++V  K + +  W   E  G  G+ P S++  
Sbjct: 2   YVAIADFVATDDSQLSFESGDKLLVLRKPSVD--WWWAEHNGCCGYIPASHLHQ 53

PRMT2, also called HRMT1L1, belongs to the arginine methyltransferase protein family. It functions as a coactivator to both estrogen receptor alpha (ER-alpha) and androgen receptor (AR), presumably through arginine methylation. The ER-alpha transcription factor is involved in cell proliferation, differentiation, morphogenesis, and apoptosis, and is also implicated in the development and progression of breast cancer. PRMT2 and its variants are upregulated in breast cancer cells and may be involved in modulating the ER-alpha signaling pathway during formation of breast cancer. PRMT2 also plays a role in regulating the function of E2F transcription factors, which are critical cell cycle regulators, by binding to the retinoblastoma gene product (RB). It contains an N-terminal SH3 domain and an AdoMet binding domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212719 cd11785, SH3_SH3RF_C, C-terminal (Fourth) Src Homology 3 domain of SH3 domain containing ring finger 1 (SH3RF1), SH3RF3, and similar domains

 Score = 43.2 bits (102), Expect = 4e-06
 Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 4/57 (7%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR--GQTGWFPESYVEP 225
           RYR I  +  ++  EL  + GDI+ V  K+  E GW  G L+  G+TG FP S+VE 
Sbjct: 1   RYRVIVPYPPQSEAELELKEGDIVFVHKKR--EDGWFKGTLQRTGKTGLFPGSFVES 55

SH3RF1 (or POSH) and SH3RF3 (or POSH2) are scaffold proteins that function as E3 ubiquitin-protein ligases. They contain an N-terminal RING finger domain and four SH3 domains. This model represents the fourth SH3 domain, located at the C-terminus of SH3RF1 and SH3RF3, and similar domains. SH3RF1 plays a role in calcium homeostasis through the control of the ubiquitin domain protein Herp. It may also have a role in regulating death receptor mediated and JNK mediated apoptosis. SH3RF3 interacts with p21-activated kinase 2 (PAK2) and GTP-loaded Rac1. It may play a role in regulating JNK mediated apoptosis in certain conditions. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212830 cd11897, SH3_SNX18, Src Homology 3 domain of Sorting nexin 18

 Score = 43.4 bits (102), Expect = 4e-06
 Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 2/55 (3%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAG-ELRGQTGWFPESYVE 224
           R RA+Y+F S N  E+S +  +++ +  +Q+ E GWL G   RG  G FP SYVE
Sbjct: 1   RARALYDFRSENPGEISLREHEVLSLCSEQDIE-GWLEGVNSRGDRGLFPASYVE 54

SNX18 is localized to peripheral endosomal structures, and acts in a trafficking pathway that is clathrin-independent but relies on AP-1 and PACS1. It binds FIP5 and is required for apical lumen formation. It may also play a role in axonal elongation. SNXs are Phox homology (PX) domain containing proteins that are involved in regulating membrane traffic and protein sorting in the endosomal system. SNX18 also contains BAR and SH3 domains. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212755 cd11821, SH3_ASAP, Src homology 3 domain of ArfGAP with SH3 domain, ankyrin repeat and PH domain containing proteins

 Score = 43.1 bits (102), Expect = 4e-06
 Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 5/55 (9%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQ---TGWFPESY 222
           R RA+Y+  + N DEL+F  G+II+V  +++ E  W  G + G     G FP S+
Sbjct: 1   RVRALYDCQADNDDELTFSEGEIIVVTGEEDDE--WWEGHIEGDPSRRGVFPVSF 53

ASAPs are Arf GTPase activating proteins (GAPs) and they function in regulating cell growth, migration, and invasion. They contain an N-terminal BAR domain, followed by a Pleckstrin homology (PH) domain, an Arf GAP domain, ankyrin (ANK) repeats, and a C-terminal SH3 domain. Vertebrates contain at least three members, ASAP1, ASAP2, and ASAP3, but some ASAP3 proteins do not seem to harbor a C-terminal SH3 domain. ASAP1 and ASAP2 show GTPase activating protein (GAP) activity towards Arf1 and Arf5. They do not show GAP activity towards Arf6, but are able to mediate Arf6 signaling by binding stably to GTP-Arf6. ASAP3 is an Arf6-specific GAP. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212758 cd11824, SH3_PSTPIP1, Src homology 3 domain of Proline-Serine-Threonine Phosphatase-Interacting Protein 1

 Score = 43.1 bits (102), Expect = 5e-06
 Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 2/54 (3%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           +Y  +Y++ ++  DELS   GD++ V  K   E GW   E  GQ G  P +Y+E
Sbjct: 1   KYSVLYDYTAQEDDELSISKGDVVAVIEK--GEDGWWTVERNGQKGLVPGTYLE 52

PSTPIP1, also called CD2 Binding Protein 1 (CD2BP1), is mainly expressed in hematopoietic cells. It is a binding partner of the cell surface receptor CD2 and PTP-PEST, a tyrosine phosphatase which functions in cell motility and Rac1 regulation. It also plays a role in the activation of the Wiskott-Aldrich syndrome protein (WASP), which couples actin rearrangement and T cell activation. Mutations in the gene encoding PSTPIP1 cause the autoinflammatory disorder known as PAPA (pyogenic sterile arthritis, pyoderma gangrenosum, and acne) syndrome. PSTPIP1 contains an N-terminal F-BAR domain, PEST motifs, and a C-terminal SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212978 cd12045, SH3_SKAP2, Src Homology 3 domain of Src Kinase-Associated Phosphoprotein 2

 Score = 43.0 bits (101), Expect = 5e-06
 Identities = 18/52 (34%), Positives = 30/52 (57%)

Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYV 223
           Y+ +++      DELSF+ GD I +  K+    GW  GE++G  G  P++Y+
Sbjct: 2   YQGLWDCTGDQPDELSFKRGDTIYILSKEYNRFGWWVGEMKGTIGLVPKAYI 53

SKAP2, also called SKAP55-Related (SKAP55R) or SKAP55 homolog (SKAP-HOM or SKAP55-HOM), is an immune cell-specific adaptor protein that plays an important role in adhesion and migration of B-cells and macrophages. Binding partners include ADAP (adhesion and degranulation-promoting adaptor protein), YopH, SHPS1, and HPK1. SKAP2 has also been identified as a substrate for lymphoid-specific tyrosine phosphatase (Lyp), which has been implicated in a wide variety of autoimmune diseases. It contains a pleckstrin homology (PH) domain, a C-terminal SH3 domain, and several tyrosine phosphorylation sites. Like SKAP1, SKAP2 is expected to bind primarily to a proline-rich region of ADAP through its SH3 domain; its degradation may be regulated by ADAP. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212731 cd11797, SH3_DNMBP_N4, Fourth N-terminal Src homology 3 domain of Dynamin Binding Protein, also called Tuba

 Score = 42.8 bits (101), Expect = 5e-06
 Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 2/49 (4%)

Query: 174 AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESY 222
           A+Y F +   +EL F+ GD I +      E GWL GEL+G+ G FP  +
Sbjct: 4   ALYRFQALEPNELDFEVGDRIRI--IATLEDGWLEGELKGRRGIFPHRF 50

DNMBP or Tuba is a cdc42-specific guanine nucleotide exchange factor (GEF) that contains four N-terminal SH3 domains, a central RhoGEF [or Dbl homology (DH)] domain followed by a Bin/Amphiphysin/Rvs (BAR) domain, and two C-terminal SH3 domains. It provides a functional link between dynamin and key regulatory proteins of the actin cytoskeleton. It plays an important role in regulating cell junction configuration. The four N-terminal SH3 domains of DNMBP bind the GTPase dynamin, which plays an important role in the fission of endocytic vesicles. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 50

>gnl|CDD|212696 cd11762, SH3_FCHSD_2, Second Src Homology 3 domain of FCH and double SH3 domains proteins

 Score = 42.8 bits (101), Expect = 5e-06
 Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 2/54 (3%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQN--AEPGWLAGELRGQTGWFPESYVE 224
           RA+Y++ +++ +ELSF  G II +  K +   + GW  GE  G+ G FP   VE
Sbjct: 3   RALYDYEAQSDEELSFPEGAIIRILRKDDNGVDDGWWEGEFNGRVGVFPSLVVE 56

This group is composed of FCH and double SH3 domains protein 1 (FCHSD1) and FCHSD2. These proteins have a common domain structure consisting of an N-terminal F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs), two SH3, and C-terminal proline-rich domains. They have only been characterized in silico and their functions remain unknown. This group also includes the insect protein, nervous wreck, which acts as a regulator of synaptic growth signaling. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 57

>gnl|CDD|213006 cd12073, SH3_HS1, Src homology 3 domain of Hematopoietic lineage cell-specific protein 1

 Score = 42.9 bits (101), Expect = 5e-06
 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 10/55 (18%)

Query: 174 AIYEFVSRNGDELSFQPGDII----MVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           A+Y++     DE+SF P + I    MV      + GW  G   G  G FP +YVE
Sbjct: 5   ALYDYQGEGDDEISFDPQETITDIEMV------DEGWWKGTCHGHRGLFPANYVE 53

HS1, also called HCLS1 (hematopoietic cell-specific Lyn substrate 1), is a cortactin homolog expressed specifically in hematopoietic cells. It is an actin regulatory protein that binds the Arp2/3 complex and stabilizes branched actin filaments. It is required for cell spreading and signaling in lymphocytes. It regulates cytoskeletal remodeling that controls lymphocyte trafficking, and it also affects tissue invasion and infiltration of leukemic B cells. Like cortactin, HS1 contains an N-terminal acidic domain, several copies of a repeat domain found in cortactin and HS1, a proline-rich region, and a C-terminal SH3 domain. The N-terminal region binds the Arp2/3 complex and F-actin, while the C-terminal region acts as an adaptor or scaffold that can connect varied proteins that bind the SH3 domain within the actin network. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212767 cd11833, SH3_Stac_1, First C-terminal Src homology 3 domain of SH3 and cysteine-rich domain-containing (Stac) proteins

 Score = 42.5 bits (100), Expect = 6e-06
 Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 2/52 (3%)

Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYV 223
           Y A+Y+F  +  ++L  +PGD I +    N +  W  G++  + G+FP ++V
Sbjct: 2   YVALYKFKPQENEDLEMRPGDKITLLDDSNED--WWKGKIEDRVGFFPANFV 51

Stac proteins are putative adaptor proteins that contain a cysteine-rich C1 domain and one or two SH3 domains at the C-terminus. There are three mammalian members (Stac1, Stac2, and Stac3) of this family. Stac1 and Stac3 contain two SH3 domains while Stac2 contains a single SH3 domain at the C-terminus. This model represents the first C-terminal SH3 domain of Stac1 and Stac3, and the single C-terminal SH3 domain of Stac2. Stac1 and Stac2 have been found to be expressed differently in mature dorsal root ganglia (DRG) neurons. Stac1 is mainly expressed in peptidergic neurons while Stac2 is found in a subset of nonpeptidergic and all trkB+ neurons. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212816 cd11883, SH3_Sdc25, Src Homology 3 domain of Sdc25/Cdc25 guanine nucleotide exchange factors

 Score = 42.3 bits (100), Expect = 8e-06
 Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 2/47 (4%)

Query: 121 IAAYPYDSTEPGDLTFNQDEVIYV-TKKENDWWTGTIGDRTARF-RG 165
           +A Y +       L+F   ++IYV  K  + WW G I   + +  RG
Sbjct: 3   VALYDFTPKSKNQLSFKAGDIIYVLNKDPSGWWDGVIISSSGKVKRG 49

This subfamily is composed of the Saccharomyces cerevisiae guanine nucleotide exchange factors (GEFs) Sdc25 and Cdc25, and similar proteins. These GEFs regulate Ras by stimulating the GDP/GTP exchange on Ras. Cdc25 is involved in the Ras/PKA pathway that plays an important role in the regulation of metabolism, stress responses, and proliferation, depending on available nutrients and conditions. Proteins in this subfamily contain an N-terminal SH3 domain as well as REM (Ras exchanger motif) and RasGEF domains at the C-terminus. SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies. Length = 55

>gnl|CDD|212977 cd12044, SH3_SKAP1, Src Homology 3 domain of Src Kinase-Associated Phosphoprotein 1

 Score = 42.5 bits (100), Expect = 8e-06
 Identities = 21/52 (40%), Positives = 30/52 (57%)

Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYV 223
           Y+ +++    N DELSFQ GD+I +  K+    GW  GEL G  G  P+ Y+
Sbjct: 2   YQGLWDCFGDNPDELSFQRGDLIYILSKEYNMYGWWVGELNGIVGIVPKDYL 53

SKAP1, also called SKAP55 (Src kinase-associated protein of 55kDa), is an immune cell-specific adaptor protein that plays an important role in T-cell adhesion, migration, and integrin clustering. It is expressed exclusively in T-lymphocytes, mast cells, and macrophages. Binding partners include ADAP (adhesion and degranulation-promoting adaptor protein), Fyn, Riam, RapL, and RasGRP. It contains a pleckstrin homology (PH) domain, a C-terminal SH3 domain, and several tyrosine phosphorylation sites. The SH3 domain of SKAP1 is necessary for its ability to regulate T-cell conjugation with antigen-presenting cells and the formation of LFA-1 clusters. SKAP1 binds primarily to a proline-rich region of ADAP through its SH3 domain; its degradation is regulated by ADAP. A secondary interaction occurs via the ADAP SH3 domain and the RKxxYxxY motif in SKAP1. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212991 cd12058, SH3_MLK4, Src Homology 3 domain of Mixed Lineage Kinase 4

 Score = 42.6 bits (100), Expect = 8e-06
 Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 3/57 (5%)

Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNA---EPGWLAGELRGQTGWFPESYVEP 225
           + A+Y++ +   DELS + GD++ V  +  A   + GW AG++R + G FP +YV  
Sbjct: 2   WTALYDYEASGEDELSLRRGDVVEVLSQDAAVSGDDGWWAGKIRHRLGIFPANYVTR 58

MLK4 is a Serine/Threonine Kinase (STK), catalyzing the transfer of the gamma-phosphoryl group from ATP to S/T residues on protein substrates. MLKs act as mitogen-activated protein kinase kinase kinases (MAP3Ks, MKKKs, MAPKKKs), which phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MLKs play roles in immunity and inflammation, as well as in cell death, proliferation, and cell cycle regulation. The specific function of MLK4 is yet to be determined. Mutations in the kinase domain of MLK4 have been detected in colorectal cancers. MLK4 contains an SH3 domain, a catalytic kinase domain, a leucine zipper, a proline-rich region, and a CRIB domain that mediates binding to GTP-bound Cdc42 and Rac. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 58

>gnl|CDD|212800 cd11866, SH3_SKAP1-like, Src Homology 3 domain of Src Kinase-Associated Phosphoprotein 1 and similar proteins

 Score = 42.0 bits (99), Expect = 9e-06
 Identities = 19/52 (36%), Positives = 29/52 (55%)

Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYV 223
           Y  +++      DELSF+ GD+I +  K+    GW  GEL G+ G  P+ Y+
Sbjct: 2   YMGLWDCSGNEPDELSFKRGDLIYIISKEYDSFGWWVGELNGKVGLVPKDYL 53

This subfamily is composed of SKAP1, SKAP2, and similar proteins. SKAP1 and SKAP2 are immune cell-specific adaptor proteins that play roles in T- and B-cell adhesion, respectively, and are thus important in the migration of T- and B-cells to sites of inflammation and for movement during T-cell conjugation with antigen-presenting cells. Both SKAP1 and SKAP2 bind to ADAP (adhesion and degranulation-promoting adaptor protein), among many other binding partners. They contain a pleckstrin homology (PH) domain, a C-terminal SH3 domain, and several tyrosine phosphorylation sites. The SH3 domain of SKAP1 is necessary for its ability to regulate T-cell conjugation with antigen-presenting cells and the formation of LFA-1 clusters. SKAP1 binds primarily to a proline-rich region of ADAP through its SH3 domain; its degradation is regulated by ADAP. A secondary interaction occurs via the ADAP SH3 domain and the RKxxYxxY motif in SKAP1. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212932 cd11999, SH3_PACSIN_like, Src homology 3 domain of an unknown subfamily of proteins with similarity to Protein kinase C and Casein kinase Substrate in Neurons (PACSIN) proteins

 Score = 42.2 bits (99), Expect = 9e-06
 Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 2/55 (3%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAG-ELRGQTGWFPESYVE 224
           R RA+Y++  +  DELSF+ G+ ++  V+   E GW  G    G  G +P +YVE
Sbjct: 3   RVRAVYDYTGQEPDELSFKAGEELL-KVEDEDEQGWCKGVTDGGAVGLYPANYVE 56

PACSINs, also called Synaptic dynamin-associated proteins (Syndapins), act as regulators of cytoskeletal and membrane dynamics. They bind both dynamin and Wiskott-Aldrich syndrome protein (WASP), and may provide direct links between the actin cytoskeletal machinery through WASP and dynamin-dependent endocytosis. Vetebrates harbor three isoforms with distinct expression patterns and specific functions. PACSINs contain an N-terminal F-BAR domain and a C-terminal SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 56

>gnl|CDD|212924 cd11991, SH3_Intersectin1_3, Third Src homology 3 domain (or SH3C) of Intersectin-1

 Score = 41.9 bits (98), Expect = 1e-05
 Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)

Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
           Y A+Y + S    +L+FQ GD+I+V  K   +  W  G +  +TG FP +YV P
Sbjct: 2   YVAMYTYESNEQGDLTFQQGDVILVTKK---DGDWWTGTVGDKTGVFPSNYVRP 52

Intersectin-1 (ITSN1) is an adaptor protein that functions in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. It plays a role in clathrin-coated pit (CCP) formation. It binds to many proteins through its multidomain structure and facilitate the assembly of multimeric complexes. ITSN1 localizes in membranous organelles, CCPs, the Golgi complex, and may be involved in the cell membrane trafficking system. It exists in alternatively spliced short and long isoforms. The short isoform contains two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoform, in addition, contains RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. The third SH3 domain (or SH3C) of ITSN1 has been shown to bind many proteins including dynamin1/2, CIN85, c-Cbl, SHIP2, Reps1, synaptojanin-1, and WNK, among others. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 52

>gnl|CDD|212815 cd11882, SH3_GRAF-like, Src Homology 3 domain of GTPase Regulator Associated with Focal adhesion kinase and similar proteins

 Score = 41.5 bits (98), Expect = 1e-05
 Identities = 16/28 (57%), Positives = 20/28 (71%)

Query: 288 VKQNAEPGWLAGELRGQTGWFPESYVEP 315
           V+ + EPGWL G L G+TG  PE+YVE 
Sbjct: 27  VQPSDEPGWLEGTLNGRTGLIPENYVEF 54

This subfamily is composed of Rho GTPase activating proteins (GAPs) with similarity to GRAF. Members contain an N-terminal BAR domain, followed by a Pleckstrin homology (PH) domain, a Rho GAP domain, and a C-terminal SH3 domain. Although vertebrates harbor four Rho GAPs in the GRAF subfamily including GRAF, GRAF2, GRAF3, and Oligophrenin-1 (OPHN1), only three are included in this model. OPHN1 contains the BAR, PH and GAP domains, but not the C-terminal SH3 domain. GRAF and GRAF2 show GAP activity towards RhoA and Cdc42. GRAF influences Rho-mediated cytoskeletal rearrangements and binds focal adhesion kinase. GRAF2 regulates caspase-activated p21-activated protein kinase-2. The SH3 domain of GRAF and GRAF2 binds PKNbeta, a target of the small GTPase Rho. SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies. Length = 54

>gnl|CDD|212880 cd11947, SH3_GRAP2_N, N-terminal Src homology 3 domain of GRB2-related adaptor protein 2

 Score = 41.7 bits (98), Expect = 1e-05
 Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 3/52 (5%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           R  ++F +   DELSF+ GD++ +    +    W   EL G+ G+ P+++V+
Sbjct: 3   RGKFDFTASGEDELSFKKGDVLKILSSDDI---WFKAELNGEEGYVPKNFVD 51

GRAP2 is also called GADS (GRB2-related adapter downstream of Shc), GrpL, GRB2L, Mona, or GRID (Grb2-related protein with insert domain). It is expressed specifically in the hematopoietic system. It plays an important role in T cell receptor (TCR) signaling by promoting the formation of the SLP-76:LAT complex, which couples the TCR to the Ras pathway. It also have roles in antigen-receptor and tyrosine kinase mediated signaling. GRAP2 is unique from other GRB2-like adaptor proteins in that it can be regulated by caspase cleavage. It contains an N-terminal SH3 domain, a central SH2 domain, and a C-terminal SH3 domain. The N-terminal SH3 domain of the related protein GRB2 binds to Sos and Sos-derived proline-rich peptides. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 52

>gnl|CDD|212861 cd11928, SH3_SH3RF3_1, First Src Homology 3 domain of SH3 domain containing ring finger 3, an E3 ubiquitin-protein ligase

 Score = 41.8 bits (98), Expect = 1e-05
 Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 2/52 (3%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           +A+Y +  +   +L F  GDII++  ++  +  W  GEL G  G+ P SY++
Sbjct: 4   KALYSYEGKEPGDLKFNKGDIIIL--RRKVDENWYHGELNGCHGFLPASYIQ 53

SH3RF3 is also called POSH2 (Plenty of SH3s 2) or SH3MD4 (SH3 multiple domains protein 4). It is a scaffold protein with E3 ubiquitin-protein ligase activity. It was identified in the screen for interacting partners of p21-activated kinase 2 (PAK2). It may play a role in regulating JNK mediated apoptosis in certain conditions. It also interacts with GTP-loaded Rac1. SH3RF3 is highly homologous to SH3RF1; it also contains an N-terminal RING finger domain and four SH3 domains. This model represents the first SH3 domain, located at the N-terminal half, of SH3RF3. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212779 cd11845, SH3_Src_like, Src homology 3 domain of Src kinase-like Protein Tyrosine Kinases

 Score = 41.8 bits (99), Expect = 1e-05
 Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)

Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR-GQTGWFPESY 222
           Y A+Y++ +R  D+LSF+ GD + + +  +    WLA  L  G+ G+ P +Y
Sbjct: 2   YVALYDYEARTDDDLSFKKGDRLQI-LDDSDGDWWLARHLSTGKEGYIPSNY 52

Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, Yes, and Brk. Src (or c-Src) proteins are cytoplasmic (or non-receptor) PTKs which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). However, Brk lacks the N-terminal myristoylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells, and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, Lyn, and Brk show a limited expression pattern. This subfamily also includes Drosophila Src42A, Src oncogene at 42A (also known as Dsrc41) which accumulates at sites of cell-cell or cell-matrix adhesion, and participates in Drosphila development and wound healing. It has been shown to promote tube elongation in the tracheal system, is essential for proper cell-cell matching during dorsal closure, and regulates cell-cell contacts in developing Drosophila eyes. The SH3 domain of Src kinases contributes to substrate recruitment by binding adaptor proteins/substrates, and regulation of kinase activity through an intramolecular interaction. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 52

>gnl|CDD|212792 cd11858, SH3_Myosin-I_fungi, Src homology 3 domain of Type I fungal Myosins

 Score = 41.6 bits (98), Expect = 1e-05
 Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 4/57 (7%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGW-LAGELRGQT-GWFPESYVEP 225
            Y+A+Y+F     +ELS +  DI+ +  K++   GW LA +L     GW P +Y+E 
Sbjct: 1   TYKALYDFAGSVANELSLKKDDIVYIVQKEDN--GWWLAKKLDESKEGWVPAAYLEE 55

Type I myosins (myosin-I) are actin-dependent motors in endocytic actin structures and actin patches. They play roles in membrane traffic in endocytic and secretory pathways, cell motility, and mechanosensing. Saccharomyces cerevisiae has two myosins-I, Myo3 and Myo5, which are involved in endocytosis and the polarization of the actin cytoskeleton. Myosin-I contains an N-terminal actin-activated ATPase, a phospholipid-binding TH1 (tail homology 1) domain, and a C-terminal extension which includes an F-actin-binding TH2 domain, an SH3 domain, and an acidic peptide that participates in activating the Arp2/3complex. The SH3 domain of myosin-I is required for myosin-I-induced actin polymerization. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212879 cd11946, SH3_GRB2_N, N-terminal Src homology 3 domain of Growth factor receptor-bound protein 2

 Score = 41.5 bits (97), Expect = 2e-05
 Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 174 AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           A Y+F +   DELSF+ GDI+ V + +  +  W   EL G+ G+ P++Y+E
Sbjct: 5   AKYDFKATADDELSFKRGDILKV-LNEECDQNWYKAELNGKDGFIPKNYIE 54

GRB2 is a critical signaling molecule that regulates the Ras pathway by linking tyrosine kinases to the Ras guanine nucleotide releasing protein Sos (son of sevenless), which converts Ras to the active GTP-bound state. It is ubiquitously expressed in all tissues throughout development and is important in cell cycle progression, motility, morphogenesis, and angiogenesis. In lymphocytes, GRB2 is associated with antigen receptor signaling components. GRB2 contains an N-terminal SH3 domain, a central SH2 domain, and a C-terminal SH3 domain. Its N-terminal SH3 domain binds to Sos and Sos-derived proline-rich peptides. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 56

>gnl|CDD|212862 cd11929, SH3_SH3RF2_1, First Src Homology 3 domain of SH3 domain containing ring finger 2

 Score = 41.1 bits (96), Expect = 2e-05
 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 2/54 (3%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           R +A+  +   N  +L F  GD+I+  +++  +  W  GE+ G +G FP S VE
Sbjct: 2   RAKALCNYRGHNPGDLKFNKGDVIL--LRRQLDENWYLGEINGVSGIFPASSVE 53

SH3RF2 is also called POSHER (POSH-eliminating RING protein) or HEPP1 (heart protein phosphatase 1-binding protein). It acts as an anti-apoptotic regulator of the JNK pathway by binding to and promoting the degradation of SH3RF1 (or POSH), a scaffold protein that is required for pro-apoptotic JNK activation. It may also play a role in cardiac functions together with protein phosphatase 1. SH3RF2 contains an N-terminal RING finger domain and three SH3 domains. This model represents the first SH3 domain, located at the N-terminal half, of SH3RF2. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212999 cd12066, SH3_GRAF3, Src Homology 3 domain of GTPase Regulator Associated with Focal adhesion kinase 3

 Score = 41.2 bits (96), Expect = 2e-05
 Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 1/52 (1%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           +A+Y   + +  ELSF P   I   V  + EPGWL     G+TG  PE+YV 
Sbjct: 3   KAMYSCKAEHSHELSF-PQGAIFSNVYPSVEPGWLKATYEGKTGLVPENYVV 53

GRAF3 is also called Rho GTPase activating protein 42 (ARHGAP42) or ARHGAP10-like. Though its function has not been characterized, it may be a GAP with activity towards RhoA and Cdc42, based on its similarity to GRAF and GRAF2. It contains an N-terminal BAR domain, followed by a Pleckstrin homology (PH) domain, a Rho GAP domain, and a C-terminal SH3 domain. The SH3 domain of GRAF and GRAF2 binds PKNbeta, a target of the small GTPase Rho. SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies. Length = 55

>gnl|CDD|212743 cd11809, SH3_srGAP, Src homology 3 domain of Slit-Robo GTPase Activating Proteins

 Score = 41.2 bits (97), Expect = 2e-05
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)

Query: 174 AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
           A +++  R+  ELSF+ GD +   + +     W  G+L GQ G  P  Y+  
Sbjct: 4   AQFDYTGRSERELSFKKGDSLT--LYRQVSDDWWRGQLNGQDGLVPHKYITL 53

Slit-Robo GTPase Activating Proteins (srGAPs) are Rho GAPs that interact with Robo1, the transmembrane receptor of Slit proteins. Slit proteins are secreted proteins that control axon guidance and the migration of neurons and leukocytes. Vertebrates contain three isoforms of srGAPs (srGAP1-3), all of which are expressed during embryonic and early development in the nervous system but with different localization and timing. A fourth member has also been reported (srGAP4, also called ARHGAP4). srGAPs contain an N-terminal F-BAR domain, a Rho GAP domain, and a C-terminal SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212792 cd11858, SH3_Myosin-I_fungi, Src homology 3 domain of Type I fungal Myosins

 Score = 40.8 bits (96), Expect = 3e-05
 Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 120 YIAAYPYDSTEPGDLTFNQDEVIYVTKKE-NDWWTGTIGDRTA 161
           Y A Y +  +   +L+  +D+++Y+ +KE N WW     D + 
Sbjct: 2   YKALYDFAGSVANELSLKKDDIVYIVQKEDNGWWLAKKLDESK 44

Type I myosins (myosin-I) are actin-dependent motors in endocytic actin structures and actin patches. They play roles in membrane traffic in endocytic and secretory pathways, cell motility, and mechanosensing. Saccharomyces cerevisiae has two myosins-I, Myo3 and Myo5, which are involved in endocytosis and the polarization of the actin cytoskeleton. Myosin-I contains an N-terminal actin-activated ATPase, a phospholipid-binding TH1 (tail homology 1) domain, and a C-terminal extension which includes an F-actin-binding TH2 domain, an SH3 domain, and an acidic peptide that participates in activating the Arp2/3complex. The SH3 domain of myosin-I is required for myosin-I-induced actin polymerization. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212871 cd11938, SH3_ARHGEF16_26, Src homology 3 domain of the Rho guanine nucleotide exchange factors ARHGEF16 and ARHGEF26

 Score = 41.0 bits (96), Expect = 3e-05
 Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 4/54 (7%)

Query: 174 AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE-LR-GQTGWFPESYVEP 225
            I  + ++  DELS Q  D+++V   Q    GW  GE LR G+ GWFP S  + 
Sbjct: 4   IIKAYTAKQPDELSLQQADVVLV--LQTESDGWYYGERLRDGERGWFPSSCAKE 55

ARHGEF16, also called ephexin-4, acts as a GEF for RhoG, activating it by exchanging bound GDP for free GTP. RhoG is a small GTPase that is a crucial regulator of Rac in migrating cells. ARHGEF16 interacts directly with the ephrin receptor EphA2 and mediates cell migration and invasion in breast cancer cells by activating RhoG. ARHGEF26, also called SGEF (SH3 domain-containing guanine exchange factor), also activates RhoG. It is highly expressed in liver and may play a role in regulating membrane dynamics. ARHGEF16 and ARHGEF26 contain RhoGEF (also called Dbl-homologous or DH), Pleckstrin Homology (PH), and SH3 domains. The SH3 domains of ARHGEFs play an autoinhibitory role through intramolecular interactions with a proline-rich region N-terminal to the DH domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212988 cd12055, SH3_CIN85_2, Second Src Homology 3 domain (SH3B) of Cbl-interacting protein of 85 kDa

 Score = 40.8 bits (95), Expect = 3e-05
 Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 2/54 (3%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           R +  + ++ +N DEL  + GDII   V    E GW  G L G+TG FP ++++
Sbjct: 1   RCQVAFSYLPQNEDELELKVGDII--EVVGEVEEGWWEGVLNGKTGMFPSNFIK 52

CIN85, also called SH3 domain-containing kinase-binding protein 1 (SH3KBP1) or CD2-binding protein 3 (CD2BP3) or Ruk, is an adaptor protein that is involved in the downregulation of receptor tyrosine kinases by facilitating endocytosis through interaction with endophilin-associated ubiquitin ligase Cbl proteins. It is also important in many other cellular processes including vesicle-mediated transport, cytoskeletal remodelling, apoptosis, cell adhesion and migration, and viral infection, among others. CIN85 exists as multiple variants from alternative splicing; the main variant contains three SH3 domains, a proline-rich region, and a C-terminal coiled-coil domain. All of these domains enable CIN85 to bind various protein partners and assemble complexes that have been implicated in many different functions. This alignment model represents the second SH3 domain (SH3B) of CIN85. SH3B has been shown to bind Cbl proline-rich peptides and ubiquitin. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212896 cd11963, SH3_STAM2, Src homology 3 domain of Signal Transducing Adaptor Molecule 2

 Score = 40.8 bits (95), Expect = 3e-05
 Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 2/54 (3%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYV 223
           R+ RA+Y+F +   +EL+F+ G+II+  V  +++  W  GE     G FP ++V
Sbjct: 2   RKVRALYDFEAVEDNELTFKHGEIII--VLDDSDANWWKGENHRGVGLFPSNFV 53

STAM2, also called EAST (Epidermal growth factor receptor-associated protein with SH3 and TAM domain) or Hbp (Hrs binding protein), is part of the endosomal sorting complex required for transport (ESCRT-0). It plays a role in sorting mono-ubiquinated endosomal cargo for trafficking to the lysosome for degradation. It is also involved in the regulation of exocytosis. STAMs were discovered as proteins that are highly phosphorylated following cytokine and growth factor stimulation. They function in cytokine signaling and surface receptor degradation, as well as regulate Golgi morphology. They associate with many proteins including Jak2 and Jak3 tyrosine kinases, Hrs, AMSH, and UBPY. STAM adaptor proteins contain VHS (Vps27, Hrs, STAM homology), ubiquitin interacting (UIM), and SH3 domains. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 57

>gnl|CDD|212774 cd11840, SH3_Intersectin_5, Fifth Src homology 3 domain (or SH3E) of Intersectin

 Score = 40.5 bits (95), Expect = 4e-05
 Identities = 17/33 (51%), Positives = 21/33 (63%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEP 315
           G ++ V    +P W  GEL GQTG FP +YVEP
Sbjct: 21  GDIINVLSKDDPDWWRGELNGQTGLFPSNYVEP 53

Intersectins (ITSNs) are adaptor proteins that function in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. They are essential for initiating clathrin-coated pit formation. They bind to many proteins through their multidomain structure and facilitate the assembly of multimeric complexes. Vertebrates contain two ITSN proteins, ITSN1 and ITSN2, which exist in alternatively spliced short and long isoforms. The short isoforms contain two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoforms, in addition, contain RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. ITSN1 and ITSN2 are both widely expressed, with variations depending on tissue type and stage of development. The fifth SH3 domain (or SH3E) of ITSN1 has been shown to bind many protein partners including SGIP1, Sos1, dynamin1/2, CIN85, c-Cbl, SHIP2, N-WASP, and synaptojanin-1, among others. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212851 cd11918, SH3_Vinexin_3, Third (or C-terminal) Src Homology 3 domain of Vinexin, also called Sorbin and SH3 domain containing 3 (Sorbs3)

 Score = 40.7 bits (95), Expect = 4e-05
 Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 4/56 (7%)

Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR--GQTGWFPESYVEP 225
           Y+A+Y++  +N DEL  + GD   V V Q  + GW  G  R   + G FP +YV P
Sbjct: 4   YKAVYQYRPQNEDELELREGDR--VDVMQQCDDGWFVGVSRRTQKFGTFPGNYVAP 57

Vinexin is also called Sorbs3, SH3P3, and SH3-containing adapter molecule 1 (SCAM-1). It is an adaptor protein containing one sorbin homology (SoHo) and three SH3 domains. Vinexin was first identified as a vinculin binding protein; it is co-localized with vinculin at cell-ECM and cell-cell adhesion sites. There are several splice variants of vinexin: alpha, which contains the SoHo and three SH3 domains and displays tissue-specific expression; and beta, which contains only the three SH3 domains and is widely expressed. Vinexin alpha stimulates the accumulation of F-actin at focal contact sites. Vinexin also promotes keratinocyte migration and wound healing. The SH3 domains of vinexin have been reported to bind a number of ligands including vinculin, WAVE2, DLG5, Abl, and Cbl. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 58

>gnl|CDD|212854 cd11921, SH3_Vinexin_1, First Src Homology 3 domain of Vinexin, also called Sorbin and SH3 domain containing 3 (Sorbs3)

 Score = 40.3 bits (94), Expect = 4e-05
 Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 2/55 (3%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           +  R  ++F +++  EL+ Q GDI  V + +  +  WL GE  G+ G FP +YVE
Sbjct: 1   KAARLKFDFQAQSPKELTLQKGDI--VYIHKEVDKNWLEGEHHGRVGIFPANYVE 53

Vinexin is also called Sorbs3, SH3P3, and SH3-containing adapter molecule 1 (SCAM-1). It is an adaptor protein containing one sorbin homology (SoHo) and three SH3 domains. Vinexin was first identified as a vinculin binding protein; it is co-localized with vinculin at cell-ECM and cell-cell adhesion sites. There are several splice variants of vinexin: alpha, which contains the SoHo and three SH3 domains and displays tissue-specific expression; and beta, which contains only the three SH3 domains and is widely expressed. Vinexin alpha stimulates the accumulation of F-actin at focal contact sites. Vinexin also promotes keratinocyte migration and wound healing. The SH3 domains of vinexin have been reported to bind a number of ligands including vinculin, WAVE2, DLG5, Abl, and Cbl. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212701 cd11767, SH3_Nck_3, Third Src Homology 3 domain of Nck adaptor proteins

 Score = 40.4 bits (95), Expect = 4e-05
 Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGW-LAGELRGQTGWFPESYVE 224
            A+Y F   N +ELSF+ G+ + +  K   +P W  A    G TG  P +YVE
Sbjct: 3   VALYPFTGENDEELSFEKGERLEIIEKPEDDPDWWKARNALGTTGLVPRNYVE 55

This group contains the third SH3 domain of Nck, the first SH3 domain of Caenorhabditis elegans Ced-2 (Cell death abnormality protein 2), and similar domains. Nck adaptor proteins regulate actin cytoskeleton dynamics by linking proline-rich effector molecules to protein tyrosine kinases and phosphorylated signaling intermediates. They contain three SH3 domains and a C-terminal SH2 domain. They function downstream of the PDGFbeta receptor and are involved in Rho GTPase signaling and actin dynamics. Vertebrates contain two Nck adaptor proteins: Nck1 (also called Nckalpha) and Nck2 (also called Nckbeta or Growth factor receptor-bound protein 4, Grb4), which show partly overlapping functions but also bind distinct targets. Their SH3 domains are involved in recruiting downstream effector molecules, such as the N-WASP/Arp2/3 complex, which when activated induces actin polymerization that results in the production of pedestals, or protrusions of the plasma membrane. The third SH3 domain of Nck appears to prefer ligands with a PxAPxR motif. SH3 domains are protein interaction domains that usually bind to proline-rich ligands with moderate affinity and selectivity, preferentially a PxxP motif. Ced-2 is a cell corpse engulfment protein that interacts with Ced-5 in a pathway that regulates the activation of Ced-10, a Rac small GTPase. Length = 56

>gnl|CDD|213009 cd12076, SH3_Tks4_2, Second Src homology 3 domain of Tyrosine kinase substrate with four SH3 domains

 Score = 40.4 bits (94), Expect = 4e-05
 Identities = 18/54 (33%), Positives = 34/54 (62%), Gaps = 2/54 (3%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           +Y  IY + +R+ DE++ + G ++ V +++N E GW     +G+ GW P SY++
Sbjct: 2   KYTVIYPYTARDQDEINLEKGAVVEV-IQKNLE-GWWKIRYQGKEGWAPASYLK 53

Tks4, also called SH3 and PX domain-containing protein 2B (SH3PXD2B) or HOFI, is a Src substrate and scaffolding protein that plays an important role in the formation of podosomes and invadopodia, the dynamic actin-rich structures that are related to cell migration and cancer cell invasion. It is required in the formation of functional podosomes, EGF-induced membrane ruffling, and lamellipodia generation. It plays an important role in cellular attachment and cell spreading. Tks4 is essential for the localization of MT1-MMP (membrane-type 1 matrix metalloproteinase) to invadopodia. It contains an N-terminal Phox homology (PX) domain and four SH3 domains. This model characterizes the second SH3 domain of Tks4. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212846 cd11913, SH3_BAIAP2L1, Src Homology 3 domain of Brain-specific Angiogenesis Inhibitor 1-Associated Protein 2-Like 1, also called Insulin Receptor Tyrosine Kinase Substrate (IRTKS)

 Score = 40.3 bits (94), Expect = 4e-05
 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 4/59 (6%)

Query: 170 RRYRAIYEFVSRNGDE-LSFQPGDIIMVPVKQNAEPGWLAGELR--GQTGWFPESYVEP 225
           ++ + I+   + N    LSF  GD+I + + +  + GWL GE       GWFP SY  P
Sbjct: 1   QKVKTIFPHTAGNNKTLLSFAQGDVITLLIPEEKD-GWLYGEHDTTKARGWFPSSYTRP 58

BAIAP2L1 or IRTKS is widely expressed, serves as a substrate for the insulin receptor, and binds the small GTPase Rac. It plays a role in regulating the actin cytoskeleton and colocalizes with F-actin, cortactin, VASP, and vinculin. BAIAP2L1 expression leads to the formation of short actin bundles, distinct from filopodia-like protrusions induced by the expression of the related protein IRSp53. IRTKS mediates the recruitment of effector proteins Tir and EspFu, which regulate host cell actin reorganization, to bacterial attachment sites. It contains an N-terminal IMD or Inverse-Bin/Amphiphysin/Rvs (I-BAR) domain, an SH3 domain, and a WASP homology 2 (WH2) actin-binding motif at the C-terminus. The SH3 domain of IRTKS has been shown to bind the proline-rich C-terminus of EspFu. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 58

>gnl|CDD|212870 cd11937, SH3_UBASH3A, Src homology 3 domain of Ubiquitin-associated and SH3 domain-containing protein A

 Score = 40.4 bits (94), Expect = 5e-05
 Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 4/56 (7%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMV-PVKQN-AEPGWLAG--ELRGQTGWFPESYVE 224
           RA++++  +N DEL   PGD I V P +Q+ A  GW+ G     G  G+ PE+Y E
Sbjct: 4   RALFQYKPQNIDELMLSPGDYIFVDPTQQSEASEGWVIGISHRTGCRGFLPENYTE 59

UBASH3A is also called Cbl-Interacting Protein 4 (CLIP4), T cell Ubiquitin LigAnd (TULA), or T cell receptor Signaling (STS)-2. It is only found in lymphoid cells and exhibits weak phosphatase activity. UBASH3A facilitates T cell-induced apoptosis through interaction with the apoptosis-inducing factor AIF. It is involved in regulating the level of phosphorylation of the zeta-associated protein (ZAP)-70 tyrosine kinase. TULA proteins contain an N-terminal UBA domain, a central SH3 domain, and a C-terminal histidine phosphatase domain. They bind c-Cbl through the SH3 domain and to ubiquitin via UBA. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 60

>gnl|CDD|212902 cd11969, SH3_PLCgamma2, Src homology 3 domain of Phospholipase C (PLC) gamma 2

 Score = 40.2 bits (94), Expect = 5e-05
 Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 122 AAYPYDSTEPGDLTFNQDEVIY-VTKKENDWWTGTIGDRTARF 163
           A Y Y +    +L+F +  +I+ V+K+   WW G  G +   +
Sbjct: 4   ALYDYRAKRSDELSFCKGALIHNVSKETGGWWKGDYGGKVQHY 46

PLCgamma2 is primarily expressed in haematopoietic cells, specifically in B cells. It is activated by tyrosine phosphorylation by B cell receptor (BCR) kinases and is recruited to the plasma membrane where its substrate is located. It is required in pre-BCR signaling and in the maturation of B cells. PLCs catalyze the hydrolysis of phosphatidylinositol (4,5)-bisphosphate [PtdIns(4,5)P2] to produce Ins(1,4,5)P3 and diacylglycerol (DAG). Ins(1,4,5)P3 initiates the calcium signaling cascade while DAG functions as an activator of PKC. PLCgamma contains a Pleckstrin homology (PH) domain followed by an elongation factor (EF) domain, two catalytic regions of PLC domains that flank two tandem SH2 domains, followed by a SH3 domain and C2 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212692 cd11758, SH3_CRK_N, N-terminal Src Homology 3 domain of Ct10 Regulator of Kinase adaptor proteins

 Score = 40.0 bits (94), Expect = 6e-05
 Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           RA+++F   + ++L F+ G+I+ V +++  E  W A    G+TG  P  YVE
Sbjct: 4   RALFDFPGNDDEDLPFKKGEILTV-IRKPEEQWWNARNSEGKTGMIPVPYVE 54

CRK adaptor proteins consists of SH2 and SH3 domains, which bind tyrosine-phosphorylated peptides and proline-rich motifs, respectively. They function downstream of protein tyrosine kinases in many signaling pathways started by various extracellular signals, including growth and differentiation factors. Cellular CRK (c-CRK) contains a single SH2 domain, followed by N-terminal and C-terminal SH3 domains. It is involved in the regulation of many cellular processes including cell growth, motility, adhesion, and apoptosis. CRK has been implicated in the malignancy of various human cancers. The N-terminal SH3 domain of CRK binds a number of target proteins including DOCK180, C3G, SOS, and cABL. The CRK family includes two alternatively spliced protein forms, CRKI and CRKII, that are expressed by the CRK gene, and the CRK-like (CRKL) protein, which is expressed by a distinct gene (CRKL). SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212919 cd11986, SH3_Stac3_1, First C-terminal Src homology 3 domain of SH3 and cysteine-rich domain-containing protein 3 (Stac3)

 Score = 39.9 bits (93), Expect = 6e-05
 Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 2/52 (3%)

Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYV 223
           + A+Y F +   D+L F PG+ I V    N E  W  G++  +TG+FP +++
Sbjct: 2   FVALYRFKALEKDDLDFHPGERITVIDDSNEE--WWRGKIGEKTGYFPMNFI 51

Stac proteins are putative adaptor proteins that contain a cysteine-rich C1 domain and one or two SH3 domains at the C-terminus. There are three mammalian members (Stac1, Stac2, and Stac3) of this family. Stac1 and Stac3 contain two SH3 domains while Stac2 contains a single SH3 domain at the C-terminus. Stac1 and Stac2 have been found to be expressed differently in mature dorsal root ganglia (DRG) neurons. Stac1 is mainly expressed in peptidergic neurons while Stac2 is found in a subset of nonpeptidergic and all trkB+ neurons. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212827 cd11894, SH3_FCHSD2_2, Second Src Homology 3 domain of FCH and double SH3 domains protein 2

 Score = 39.9 bits (93), Expect = 6e-05
 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQN-AEPGWLAGELRGQTGWFPESYVE 224
           +A+Y++  +  DELSF  G II +  K+N  + G+  GE  G+ G FP   VE
Sbjct: 3   KALYDYEGQTDDELSFPEGAIIRILNKENQDDDGFWEGEFNGRIGVFPSVLVE 55

FCHSD2 has a domain structure consisting of an N-terminal F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs), two SH3, and C-terminal proline-rich domains. It has only been characterized in silico and its function is unknown. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 56

>gnl|CDD|212899 cd11966, SH3_ASAP2, Src homology 3 domain of ArfGAP with SH3 domain, ankyrin repeat and PH domain containing protein 2

 Score = 39.9 bits (93), Expect = 6e-05
 Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 5/56 (8%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQ---TGWFPESYV 223
           R +A+Y  V+ N DEL+F  G+II+V  +++ E  W  G + G+    G FP S+V
Sbjct: 1   RVKALYNCVADNPDELTFSEGEIIIVDGEEDKE--WWIGHIDGEPTRRGAFPVSFV 54

ASAP2 is also called DDEF2 (Development and Differentiation Enhancing Factor 2), AMAP2, centaurin beta-3, or PAG3. It mediates the functions of Arf GTPases vial dual mechanisms: it exhibits GTPase activating protein (GAP) activity towards class I (Arf1) and II (Arf5) Arfs; and it binds class III Arfs (GTP-Arf6) stably without GAP activity. It binds paxillin and is implicated in Fcgamma receptor-mediated phagocytosis in macrophages and in cell migration. ASAP2 contains an N-terminal BAR domain, followed by a Pleckstrin homology (PH) domain, an Arf GAP domain, ankyrin (ANK) repeats, and a C-terminal SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 56

>gnl|CDD|212739 cd11805, SH3_GRB2_like_C, C-terminal Src homology 3 domain of Growth factor receptor-bound protein 2 (GRB2) and related proteins

 Score = 39.5 bits (93), Expect = 7e-05
 Identities = 15/33 (45%), Positives = 23/33 (69%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEP 315
           G ++ V  +++P W  GELRG+ G FP +YV+P
Sbjct: 21  GDIITVLDSSDPDWWKGELRGRVGIFPANYVQP 53

This family includes the adaptor protein GRB2 and related proteins including Drosophila melanogaster Downstream of receptor kinase (DRK), Caenorhabditis elegans Sex muscle abnormal protein 5 (Sem-5), GRB2-related adaptor protein (GRAP), GRAP2, and similar proteins. Family members contain an N-terminal SH3 domain, a central SH2 domain, and a C-terminal SH3 domain. GRB2/Sem-5/DRK is a critical signaling molecule that regulates the Ras pathway by linking tyrosine kinases to the Ras guanine nucleotide releasing protein Sos (son of sevenless), which converts Ras to the active GTP-bound state. GRAP2 plays an important role in T cell receptor (TCR) signaling by promoting the formation of the SLP-76:LAT complex, which couples the TCR to the Ras pathway. GRAP acts as a negative regulator of T cell receptor (TCR)-induced lymphocyte proliferation by downregulating the signaling to the Ras/ERK pathway. The C-terminal SH3 domains (SH3c) of GRB2 and GRAP2 have been shown to bind to classical PxxP motif ligands, as well as to non-classical motifs. GRB2 SH3c binds Gab2 (Grb2-associated binder 2) through epitopes containing RxxK motifs, while the SH3c of GRAP2 binds to the phosphatase-like protein HD-PTP via a RxxxxK motif. SH3 domains are protein interaction domains that typically bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212946 cd12013, SH3_RIM-BP_3, Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins

 Score = 40.1 bits (94), Expect = 7e-05
 Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 8/62 (12%)

Query: 171 RYRAIYEF----VSRNGD---ELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYV 223
           R  A++++     S N D   ELSF+ GDII V  + + E G+  GEL GQ G  P +++
Sbjct: 1   RMVALFDYDPRESSPNVDAEVELSFRAGDIITVFGEMD-EDGFYYGELNGQRGLVPSNFL 59

Query: 224 EP 225
           E 
Sbjct: 60  EE 61

RIMs binding proteins (RBPs, RIM-BPs) associate with calcium channels present in photoreceptors, neurons, and hair cells; they interact simultaneously with specific calcium channel subunits, and active zone proteins, RIM1 and RIM2. RIMs are part of the matrix at the presynaptic active zone and are associated with synaptic vesicles through their interaction with the small GTPase Rab3. RIM-BPs play a role in regulating synaptic transmission by serving as adaptors and linking calcium channels with the synaptic vesicle release machinery. RIM-BPs contain three SH3 domains and two to three fibronectin III repeats. Invertebrates contain one, while vertebrates contain at least two RIM-BPs, RIM-BP1 and RIM-BP2. RIM-BP1 is also called peripheral-type benzodiazapine receptor associated protein 1 (PRAX-1). Mammals contain a third protein, RIM-BP3. RIM-BP1 and RIM-BP2 are predominantly expressed in the brain where they display overlapping but distinct expression patterns, while RIM-BP3 is almost exclusively expressed in the testis and is essential in spermiogenesis. The SH3 domains of RIM-BPs bind to the PxxP motifs of RIM1, RIM2, and L-type (alpha1D) and N-type (alpha1B) calcium channel subunits. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 61

>gnl|CDD|212778 cd11844, SH3_CAS, Src homology 3 domain of CAS (Crk-Associated Substrate) scaffolding proteins

 Score = 39.6 bits (93), Expect = 7e-05
 Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 3/49 (6%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAE--PGWLAGELRGQTGWFP 219
           RA+Y+ V+ + DEL+F+ GDI+ V ++QN     GW    LRG+ G  P
Sbjct: 3   RALYDNVAESPDELAFRRGDILTV-LEQNTAGLEGWWLCSLRGRQGIAP 50

CAS proteins function as molecular scaffolds to regulate protein complexes that are involved in many cellular processes including migration, chemotaxis, apoptosis, differentiation, and progenitor cell function. They mediate the signaling of integrins at focal adhesions where they localize, and thus, regulate cell invasion and survival. Over-expression of these proteins is implicated in poor prognosis, increased metastasis, and resistance to chemotherapeutics in many cancers such as breast, lung, melanoma, and glioblastoma. CAS proteins have also been linked to the pathogenesis of inflammatory disorders, Alzheimer's, Parkinson's, and developmental defects. They share a common domain structure that includes an N-terminal SH3 domain, an unstructured substrate domain that contains many YxxP motifs, a serine-rich four-helix bundle, and a FAT-like C-terminal domain. Vertebrates contain four CAS proteins: BCAR1 (or p130Cas), NEDD9 (or HEF1), EFS (or SIN), and CASS4 (or HEPL). The SH3 domain of CAS proteins binds to diverse partners including FAK, FRNK, Pyk2, PTP-PEST, DOCK180, among others. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 56

>gnl|CDD|212903 cd11970, SH3_PLCgamma1, Src homology 3 domain of Phospholipase C (PLC) gamma 1

 Score = 40.0 bits (93), Expect = 8e-05
 Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 3/53 (5%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTG-WFPESYVE 224
           +A++++ ++  DEL+F    II    KQ  E GW  G+  G+   WFP +YVE
Sbjct: 7   KALFDYKAQREDELTFTKNAIIQNVEKQ--EGGWWRGDYGGKKQLWFPSNYVE 57

PLCgamma1 is widely expressed and is essential in growth and development. It is activated by the TrkA receptor tyrosine kinase and functions as a key regulator of cell differentiation. It is also the predominant PLCgamma in T cells and is required for T cell and NK cell function. PLCs catalyze the hydrolysis of phosphatidylinositol (4,5)-bisphosphate [PtdIns(4,5)P2] to produce Ins(1,4,5)P3 and diacylglycerol (DAG). Ins(1,4,5)P3 initiates the calcium signaling cascade while DAG functions as an activator of PKC. PLCgamma contains a Pleckstrin homology (PH) domain followed by an elongation factor (EF) domain, two catalytic regions of PLC domains that flank two tandem SH2 domains, followed by a SH3 domain and C2 domain. The SH3 domain of PLCgamma1 directly interacts with dynamin-1 and can serve as a guanine nucleotide exchange factor (GEF). It also interacts with Cbl, inhibiting its phosphorylation and activity. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 60

>gnl|CDD|212810 cd11877, SH3_PIX, Src Homology 3 domain of Pak Interactive eXchange factors

 Score = 39.2 bits (92), Expect = 9e-05
 Identities = 16/33 (48%), Positives = 21/33 (63%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEP 315
           G ++ V Q  E GW  G L G+TGWFP +YV+ 
Sbjct: 21  GDIITVTQVVEGGWWEGTLNGKTGWFPSNYVKE 53

PIX proteins are Rho guanine nucleotide exchange factors (GEFs), which activate small GTPases by exchanging bound GDP for free GTP. They act as GEFs for both Cdc42 and Rac 1, and have been implicated in cell motility, adhesion, neurite outgrowth, and cell polarity. Vertebrates contain two proteins from the PIX subfamily, alpha-PIX and beta-PIX. Alpha-PIX, also called ARHGEF6, is localized in dendritic spines where it regulates spine morphogenesis. Mutations in the ARHGEF6 gene cause X-linked intellectual disability in humans. Beta-PIX play roles in regulating neuroendocrine exocytosis, focal adhesion maturation, cell migration, synaptic vesicle localization, and insulin secretion. PIX proteins contain an N-terminal SH3 domain followed by RhoGEF (also called Dbl-homologous or DH) and Pleckstrin Homology (PH) domains, and a C-terminal leucine-zipper domain for dimerization. The SH3 domain of PIX binds to an atypical PxxxPR motif in p21-activated kinases (PAKs) with high affinity. The binding of PAKs to PIX facilitate the localization of PAKs to focal complexes and also localizes PAKs to PIX targets Cdc43 and Rac, leading to the activation of PAKs. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212874 cd11941, SH3_ARHGEF37_C2, Second C-terminal Src homology 3 domain of Rho guanine nucleotide exchange factor 37

 Score = 39.5 bits (92), Expect = 9e-05
 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)

Query: 174 AIYEFVSRNGDELSFQPGDIIMV--PVKQNAEPGWLAGELRGQTGWFPESYV 223
           A Y F +R+  E+S Q G  + V  P  +   P W   E+ GQ G+ P SY+
Sbjct: 4   AAYPFTARSKHEVSLQAGQPVTVLEPHDKKGSPEWSLVEVNGQRGYVPSSYL 55

ARHGEF37 contains a RhoGEF [or Dbl homology (DH)] domain followed by a Bin/Amphiphysin/Rvs (BAR) domain, and two C-terminal SH3 domains. Its specific function is unknown. Its domain architecture is similar to the C-terminal half of DNMBP or Tuba, a cdc42-specific GEF that provides a functional link between dynamin, Rho GTPase signaling, and actin dynamics, and plays an important role in regulating cell junction configuration. GEFs activate small GTPases by exchanging bound GDP for free GTP. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 57

>gnl|CDD|212757 cd11823, SH3_Nostrin, Src homology 3 domain of Nitric Oxide Synthase TRaffic INducer

 Score = 38.9 bits (91), Expect = 1e-04
 Identities = 14/32 (43%), Positives = 20/32 (62%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVE 314
           G ++ V +  + GW  GEL G+ G FP +YVE
Sbjct: 21  GDIIEVHEKQDDGWWLGELNGKKGIFPATYVE 52

Nostrin is expressed in endothelial and epithelial cells and is involved in the regulation, trafficking and targeting of endothelial NOS (eNOS). It facilitates the endocytosis of eNOS by coordinating the functions of dynamin and the Wiskott-Aldrich syndrome protein (WASP). Increased expression of Nostrin may be correlated to preeclampsia. Nostrin contains an N-terminal F-BAR domain and a C-terminal SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212700 cd11766, SH3_Nck_2, Second Src Homology 3 domain of Nck adaptor proteins

 Score = 39.2 bits (92), Expect = 1e-04
 Identities = 15/33 (45%), Positives = 18/33 (54%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEP 315
           G  V V + +  GW  GE  GQ GWFP +YV  
Sbjct: 21  GDRVLVLEKSSDGWWRGECNGQVGWFPSNYVTE 53

Nck adaptor proteins regulate actin cytoskeleton dynamics by linking proline-rich effector molecules to protein tyrosine kinases and phosphorylated signaling intermediates. They contain three SH3 domains and a C-terminal SH2 domain. They function downstream of the PDGFbeta receptor and are involved in Rho GTPase signaling and actin dynamics. Vertebrates contain two Nck adaptor proteins: Nck1 (also called Nckalpha) and Nck2 (also called Nckbeta or Growth factor receptor-bound protein 4, Grb4), which show partly overlapping functions but also bind distinct targets. Their SH3 domains are involved in recruiting downstream effector molecules, such as the N-WASP/Arp2/3 complex, which when activated induces actin polymerization that results in the production of pedestals, or protrusions of the plasma membrane. The second SH3 domain of Nck appears to prefer ligands containing the APxxPxR motif. SH3 domains are protein interaction domains that usually bind to proline-rich ligands with moderate affinity and selectivity, preferentially a PxxP motif. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212730 cd11796, SH3_DNMBP_N3, Third N-terminal Src homology 3 domain of Dynamin Binding Protein, also called Tuba

 Score = 38.9 bits (91), Expect = 1e-04
 Identities = 14/31 (45%), Positives = 18/31 (58%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYV 313
           G VV +    + GW  GEL G+ G FPE +V
Sbjct: 21  GDVVTITGILDKGWFRGELNGRRGIFPEGFV 51

DNMBP or Tuba is a cdc42-specific guanine nucleotide exchange factor (GEF) that contains four N-terminal SH3 domains, a central RhoGEF [or Dbl homology (DH)] domain followed by a Bin/Amphiphysin/Rvs (BAR) domain, and two C-terminal SH3 domains. It provides a functional link between dynamin and key regulatory proteins of the actin cytoskeleton. It plays an important role in regulating cell junction configuration. The four N-terminal SH3 domains of DNMBP binds the GTPase dynamin, which plays an important role in the fission of endocytic vesicles. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 51

>gnl|CDD|212820 cd11887, SH3_Bbc1, Src Homology 3 domain of Bbc1 and similar domains

 Score = 39.2 bits (92), Expect = 1e-04
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)

Query: 121 IAAYPYDSTEPGDLTFNQDEVIYVTKKE-NDWWTGTIGD 158
            A YPY+S    DL F+  ++I VT++E  DW+ G   D
Sbjct: 5   KALYPYESDHEDDLNFDVGQLITVTEEEDADWYFGEYVD 43

This subfamily is composed of Saccharomyces cerevisiae Bbc1p, also called Mti1p (Myosin tail region-interacting protein), and similar proteins. Bbc1p interacts with and regulates type I myosins in yeast, Myo3p and Myo5p, which are involved in actin cytoskeletal reorganization. It also binds and inhibits Las17, a WASp family protein that functions as an activator of the Arp2/3 complex. Bbc1p contains an N-terminal SH3 domain. SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies. Length = 60

>gnl|CDD|212835 cd11902, SH3_Nck2_2, Second Src Homology 3 domain of Nck2 adaptor protein

 Score = 38.8 bits (90), Expect = 1e-04
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 2/48 (4%)

Query: 176 YEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYV 223
           + +V+   DELS   G    V V +    GW  G   GQ GWFP +YV
Sbjct: 7   FAYVAEREDELSLVKGS--RVTVMEKCSDGWWRGSYNGQIGWFPSNYV 52

Nck2 (also called Nckbeta or Growth factor receptor-bound protein 4, Grb4) plays a crucial role in connecting signaling pathways of tyrosine kinase receptors and important effectors in actin dynamics and cytoskeletal remodeling. It binds neuronal signaling proteins such as ephrinB and Disabled-1 (Dab-1) exclusively. Nck adaptor proteins regulate actin cytoskeleton dynamics by linking proline-rich effector molecules to protein tyrosine kinases and phosphorylated signaling intermediates. They contain three SH3 domains and a C-terminal SH2 domain. They function downstream of the PDGFbeta receptor and are involved in Rho GTPase signaling and actin dynamics. Vertebrates contain two Nck adaptor proteins: Nck1 (also called Nckalpha) and Nck2, which show partly overlapping functions but also bind distinct targets. The second SH3 domain of Nck appears to prefer ligands containing the APxxPxR motif. SH3 domains are protein interaction domains that usually bind to proline-rich ligands with moderate affinity and selectivity, preferentially a PxxP motif. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|214620 smart00326, SH3, Src homology 3 domains

 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)

Query: 283 GTVVPVKQNAEPGWLAGEL-RGQTGWFPESYVE 314
           G ++ V + ++ GW  G L RG+ G FP +YVE
Sbjct: 24  GDIITVLEKSDDGWWKGRLGRGKEGLFPSNYVE 56

Src homology 3 (SH3) domains bind to target proteins through sequences containing proline and hydrophobic amino acids. Pro-containing polypeptides may bind to SH3 domains in 2 different binding orientations. Length = 56

>gnl|CDD|212774 cd11840, SH3_Intersectin_5, Fifth Src homology 3 domain (or SH3E) of Intersectin

 Score = 38.2 bits (89), Expect = 2e-04
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)

Query: 121 IAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTIGDRTARF 163
           IA +PY +    +L+F + ++I V  K++ DWW G +  +T  F
Sbjct: 3   IALFPYTAQNEDELSFQKGDIINVLSKDDPDWWRGELNGQTGLF 46

Intersectins (ITSNs) are adaptor proteins that function in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. They are essential for initiating clathrin-coated pit formation. They bind to many proteins through their multidomain structure and facilitate the assembly of multimeric complexes. Vertebrates contain two ITSN proteins, ITSN1 and ITSN2, which exist in alternatively spliced short and long isoforms. The short isoforms contain two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoforms, in addition, contain RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. ITSN1 and ITSN2 are both widely expressed, with variations depending on tissue type and stage of development. The fifth SH3 domain (or SH3E) of ITSN1 has been shown to bind many protein partners including SGIP1, Sos1, dynamin1/2, CIN85, c-Cbl, SHIP2, N-WASP, and synaptojanin-1, among others. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212761 cd11827, SH3_MyoIe_If_like, Src homology 3 domain of Myosins Ie, If, and similar proteins

 Score = 38.5 bits (90), Expect = 2e-04
 Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 1/45 (2%)

Query: 122 AAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTARFRG 165
           A Y YD+ +  +L+FN+ ++I + K+  + WWTG +  +   F G
Sbjct: 4   ALYAYDAQDTDELSFNEGDIIEILKEDPSGWWTGRLRGKEGLFPG 48

Myosins Ie (MyoIe) and If (MyoIf) are nonmuscle, unconventional, long tailed, class I myosins containing an N-terminal motor domain and a myosin tail with TH1, TH2, and SH3 domains. MyoIe interacts with the endocytic proteins, dynamin and synaptojanin-1, through its SH3 domain; it may play a role in clathrin-dependent endocytosis. In the kidney, MyoIe is critical for podocyte function and normal glomerular filtration. Mutations in MyoIe is associated with focal segmental glomerulosclerosis, a disease characterized by massive proteinuria and progression to end-stage kidney disease. MyoIf is predominantly expressed in the immune system; it plays a role in immune cell motility and innate immunity. Mutations in MyoIf may be associated with the loss of hearing. The MyoIf gene has also been found to be fused to the MLL (Mixed lineage leukemia) gene in infant acute myeloid leukemias (AML). SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212997 cd12064, SH3_GRAF, Src Homology 3 domain of GTPase Regulator Associated with Focal adhesion kinase

 Score = 38.2 bits (88), Expect = 2e-04
 Identities = 19/33 (57%), Positives = 22/33 (66%), Gaps = 1/33 (3%)

Query: 283 GTVVP-VKQNAEPGWLAGELRGQTGWFPESYVE 314
           GTV   V  + EPGWL G L G+TG  PE+YVE
Sbjct: 22  GTVFDNVHPSQEPGWLEGTLNGKTGLIPENYVE 54

GRAF, also called Rho GTPase activating protein 26 (ARHGAP26), Oligophrenin-1-like (OPHN1L) or GRAF1, is a GAP with activity towards RhoA and Cdc42 and is only weakly active towards Rac1. It influences Rho-mediated cytoskeletal rearrangements and binds focal adhesion kinase (FAK), which is a critical component of integrin signaling. It is essential for the major clathrin-independent endocytic pathway mediated by pleiomorphic membranes. GRAF contains an N-terminal BAR domain, followed by a Pleckstrin homology (PH) domain, a Rho GAP domain, and a C-terminal SH3 domain. The SH3 domain of GRAF binds PKNbeta, a target of the small GTPase Rho. SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies. Length = 56

>gnl|CDD|212885 cd11952, SH3_iASPP, Src Homology 3 (SH3) domain of Inhibitor of ASPP protein (iASPP)

 Score = 38.8 bits (90), Expect = 2e-04
 Identities = 16/49 (32%), Positives = 27/49 (55%)

Query: 174 AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESY 222
           A++++ +   DELSF+ GD++ V  K      W    L G+ G+ P +Y
Sbjct: 5   ALWDYSAEFPDELSFKEGDMVTVLRKDGEGTDWWWASLCGREGYVPRNY 53

iASPP, also called RelA-associated inhibitor (RAI), is an oncoprotein that inhibits the apoptotic transactivation potential of p53. It is upregulated in human breast cancers expressing wild-type p53, in acute leukemias regardless of the p53 mutation status, as well as in ovarian cancer where it is associated with poor patient outcome and chemoresistance. iASPP is also a binding partner and negative regulator of p65RelA, which promotes cell proliferation and inhibits apoptosis; p65RelA has the opposite effect on cell growth compared to the p53 family. It contains a proline-rich region, four ankyrin (ANK) repeats, and an SH3 domain at its C-terminal half. The SH3 domain and the ANK repeats of iASPP contribute to the p53 binding site; they bind to the DNA binding domain of p53. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 56

>gnl|CDD|212809 cd11876, SH3_MLK, Src Homology 3 domain of Mixed Lineage Kinases

 Score = 38.3 bits (89), Expect = 2e-04
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 3/55 (5%)

Query: 174 AIYEFVSRNGDELSFQPGDIIMV---PVKQNAEPGWLAGELRGQTGWFPESYVEP 225
           A++++ +R  DEL+ + G  + V       + + GW  G++  + G FP +YV P
Sbjct: 4   ALFDYDARGEDELTLRRGQPVEVLSKDAAVSGDEGWWTGKIGDKVGIFPSNYVAP 58

MLKs are Serine/Threonine Kinases (STKs), catalyzing the transfer of the gamma-phosphoryl group from ATP to S/T residues on protein substrates. MLKs act as mitogen-activated protein kinase kinase kinases (MAP3Ks, MKKKs, MAPKKKs), which phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MLKs play roles in immunity and inflammation, as well as in cell death, proliferation, and cell cycle regulation. Mammals have four MLKs (MLK1-4), mostly conserved in vertebrates, which contain an SH3 domain, a catalytic kinase domain, a leucine zipper, a proline-rich region, and a CRIB domain that mediates binding to GTP-bound Cdc42 and Rac. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 58

>gnl|CDD|212819 cd11886, SH3_BOI, Src Homology 3 domain of fungal BOI-like proteins

 Score = 38.1 bits (89), Expect = 2e-04
 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 5/55 (9%)

Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAE--PGWLAGE--LRGQTGWFPESY 222
              I++F +R+ DEL+ +PGD I + ++ + E   GW  G     G+TG FP  +
Sbjct: 2   LIVIHDFNARSEDELTLKPGDKIEL-IEDDEEFGDGWYLGRNLRTGETGLFPVVF 55

This subfamily includes the Saccharomyces cerevisiae proteins BOI1 and BOI2, and similar proteins. They contain an N-terminal SH3 domain, a Sterile alpha motif (SAM), and a Pleckstrin homology (PH) domain at the C-terminus. BOI1 and BOI2 interact with the SH3 domain of Bem1p, a protein involved in bud formation. They promote polarized cell growth and participates in the NoCut signaling pathway, which is involved in the control of cytokinesis. SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies. Length = 55

>gnl|CDD|212992 cd12059, SH3_MLK1-3, Src Homology 3 domain of Mixed Lineage Kinases 1, 2, and 3

 Score = 38.2 bits (89), Expect = 2e-04
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 3/55 (5%)

Query: 174 AIYEFVSRNGDELSFQPGDIIMVPVKQNA---EPGWLAGELRGQTGWFPESYVEP 225
           A++++ +   DEL+ + GD + V  K +A   + GW  G++  + G FP +YV  
Sbjct: 4   AVFDYEASAEDELTLRRGDRVEVLSKDSAVSGDEGWWTGKINDRVGIFPSNYVTS 58

MLKs 1, 2, and 3 are Serine/Threonine Kinases (STKs), catalyzing the transfer of the gamma-phosphoryl group from ATP to S/T residues on protein substrates. MLKs act as mitogen-activated protein kinase kinase kinases (MAP3Ks, MKKKs, MAPKKKs), which phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MLKs play roles in immunity and inflammation, as well as in cell death, proliferation, and cell cycle regulation. Little is known about the specific function of MLK1, also called MAP3K9. It is capable of activating the c-Jun N-terminal kinase pathway. Mice lacking both MLK1 and MLK2 are viable, fertile, and have normal life spans. MLK2, also called MAP3K10, is abundant in brain, skeletal muscle, and testis. It functions upstream of the MAPK, c-Jun N-terminal kinase. It binds hippocalcin, a calcium-sensor protein that protects neurons against calcium-induced cell death. Both MLK2 and hippocalcin may be associated with the pathogenesis of Parkinson's disease. MLK3, also called MAP3K11, is highly expressed in breast cancer cells and its signaling through c-Jun N-terminal kinase has been implicated in the migration, invasion, and malignancy of cancer cells. It also functions as a negative regulator of Inhibitor of Nuclear Factor-KappaB Kinase (IKK) and thus, impacts inflammation and immunity. MLKs contain an SH3 domain, a catalytic kinase domain, a leucine zipper, a proline-rich region, and a CRIB domain that mediates binding to GTP-bound Cdc42 and Rac. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 58

>gnl|CDD|212994 cd12061, SH3_betaPIX, Src Homology 3 domain of beta-Pak Interactive eXchange factor

 Score = 37.7 bits (87), Expect = 3e-04
 Identities = 15/31 (48%), Positives = 19/31 (61%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYV 313
           G V+ V +  E GW  G   G+TGWFP +YV
Sbjct: 21  GDVIHVTRVEEGGWWEGTHNGRTGWFPSNYV 51

Beta-PIX, also called Rho guanine nucleotide exchange factor 7 (ARHGEF7) or Cool (Cloned out of Library)-1, activates small GTPases by exchanging bound GDP for free GTP. It acts as a GEF for both Cdc42 and Rac 1, and plays important roles in regulating neuroendocrine exocytosis, focal adhesion maturation, cell migration, synaptic vesicle localization, and insulin secretion. PIX proteins contain an N-terminal SH3 domain followed by RhoGEF (also called Dbl-homologous or DH) and Pleckstrin Homology (PH) domains, and a C-terminal leucine-zipper domain for dimerization. The SH3 domain of PIX binds to an atypical PxxxPR motif in p21-activated kinases (PAKs) with high affinity. The binding of PAKs to PIX facilitate the localization of PAKs to focal complexes and also localizes PAKs to PIX targets Cdc43 and Rac, leading to the activation of PAKs. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212771 cd11837, SH3_Intersectin_2, Second Src homology 3 domain (or SH3B) of Intersectin

 Score = 37.7 bits (88), Expect = 3e-04
 Identities = 10/35 (28%), Positives = 20/35 (57%)

Query: 120 YIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTG 154
             A YP+ + +   L+F + ++I V +++  WW G
Sbjct: 2   ATALYPWRAKKENHLSFAKGDIITVLEQQEMWWFG 36

Intersectins (ITSNs) are adaptor proteins that function in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. They are essential for initiating clathrin-coated pit formation. They bind to many proteins through their multidomain structure and facilitate the assembly of multimeric complexes. Vertebrates contain two ITSN proteins, ITSN1 and ITSN2, which exist in alternatively spliced short and long isoforms. The short isoforms contain two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoforms, in addition, contain RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. ITSN1 and ITSN2 are both widely expressed, with variations depending on tissue type and stage of development. The second SH3 domain (or SH3B) of ITSN1 has been shown to bind WNK and CdGAP. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212763 cd11829, SH3_GAS7, Src homology 3 domain of Growth Arrest Specific protein 7

 Score = 37.9 bits (88), Expect = 3e-04
 Identities = 15/31 (48%), Positives = 18/31 (58%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYV 313
           G ++ V Q  + GW  GE  G  GWFP SYV
Sbjct: 22  GELIRVLQAPDGGWWEGEKDGLRGWFPASYV 52

GAS7 is mainly expressed in the brain and is required for neurite outgrowth. It may also play a role in the protection and migration of embryonic stem cells. Treatment-related acute myeloid leukemia (AML) has been reported resulting from mixed-lineage leukemia (MLL)-GAS7 translocations as a complication of primary cancer treatment. GAS7 contains an N-terminal SH3 domain, followed by a WW domain, and a central F-BAR domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 52

>gnl|CDD|212696 cd11762, SH3_FCHSD_2, Second Src Homology 3 domain of FCH and double SH3 domains proteins

 Score = 38.1 bits (89), Expect = 3e-04
 Identities = 12/50 (24%), Positives = 24/50 (48%), Gaps = 5/50 (10%)

Query: 122 AAYPYDSTEPGDLTFNQDEVIYVTKKEND-----WWTGTIGDRTARFRGV 166
           A Y Y++    +L+F +  +I + +K+++     WW G    R   F  +
Sbjct: 4   ALYDYEAQSDEELSFPEGAIIRILRKDDNGVDDGWWEGEFNGRVGVFPSL 53

This group is composed of FCH and double SH3 domains protein 1 (FCHSD1) and FCHSD2. These proteins have a common domain structure consisting of an N-terminal F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs), two SH3, and C-terminal proline-rich domains. They have only been characterized in silico and their functions remain unknown. This group also includes the insect protein, nervous wreck, which acts as a regulator of synaptic growth signaling. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 57

>gnl|CDD|212767 cd11833, SH3_Stac_1, First C-terminal Src homology 3 domain of SH3 and cysteine-rich domain-containing (Stac) proteins

 Score = 37.9 bits (88), Expect = 3e-04
 Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 119 YYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTIGDRTARF 163
            Y+A Y +   E  DL     + I +    N DWW G I DR   F
Sbjct: 1   TYVALYKFKPQENEDLEMRPGDKITLLDDSNEDWWKGKIEDRVGFF 46

Stac proteins are putative adaptor proteins that contain a cysteine-rich C1 domain and one or two SH3 domains at the C-terminus. There are three mammalian members (Stac1, Stac2, and Stac3) of this family. Stac1 and Stac3 contain two SH3 domains while Stac2 contains a single SH3 domain at the C-terminus. This model represents the first C-terminal SH3 domain of Stac1 and Stac3, and the single C-terminal SH3 domain of Stac2. Stac1 and Stac2 have been found to be expressed differently in mature dorsal root ganglia (DRG) neurons. Stac1 is mainly expressed in peptidergic neurons while Stac2 is found in a subset of nonpeptidergic and all trkB+ neurons. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212919 cd11986, SH3_Stac3_1, First C-terminal Src homology 3 domain of SH3 and cysteine-rich domain-containing protein 3 (Stac3)

 Score = 38.0 bits (88), Expect = 3e-04
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 119 YYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTIGDRTARF 163
           Y++A Y + + E  DL F+  E I V    N +WW G IG++T  F
Sbjct: 1   YFVALYRFKALEKDDLDFHPGERITVIDDSNEEWWRGKIGEKTGYF 46

Stac proteins are putative adaptor proteins that contain a cysteine-rich C1 domain and one or two SH3 domains at the C-terminus. There are three mammalian members (Stac1, Stac2, and Stac3) of this family. Stac1 and Stac3 contain two SH3 domains while Stac2 contains a single SH3 domain at the C-terminus. Stac1 and Stac2 have been found to be expressed differently in mature dorsal root ganglia (DRG) neurons. Stac1 is mainly expressed in peptidergic neurons while Stac2 is found in a subset of nonpeptidergic and all trkB+ neurons. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212908 cd11975, SH3_ARHGEF9, Src homology 3 domain of the Rho guanine nucleotide exchange factor ARHGEF9

 Score = 38.5 bits (89), Expect = 3e-04
 Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 2/50 (4%)

Query: 174 AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYV 223
           A+++ V+    EL+F+ GD+I V    N +  W  G++  + GWFP S+V
Sbjct: 9   AVWDHVTMANRELAFKAGDVIKVLDASNKD--WWWGQIDDEEGWFPASFV 56

ARHGEF9, also called PEM2 or collybistin, selectively activates Cdc42 by exchanging bound GDP for free GTP. It is highly expressed in the brain and it interacts with gephyrin, a postsynaptic protein associated with GABA and glycine receptors. Mutations in the ARHGEF9 gene cause X-linked mental retardation with associated features like seizures, hyper-anxiety, aggressive behavior, and sensory hyperarousal. ARHGEF9 contains a SH3 domain followed by RhoGEF (also called Dbl-homologous or DH) and Pleckstrin Homology (PH) domains. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 62

>gnl|CDD|212985 cd12052, SH3_CIN85_1, First Src Homology 3 domain (SH3A) of Cbl-interacting protein of 85 kDa

 Score = 38.0 bits (88), Expect = 3e-04
 Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 2/48 (4%)

Query: 176 YEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYV 223
           +++ +++ DEL+   GDII    K +   GW  GE++G+ G FP+++V
Sbjct: 6   FDYKAQHEDELTITVGDIITKIKKDDG--GWWEGEIKGRRGLFPDNFV 51

CIN85, also called SH3 domain-containing kinase-binding protein 1 (SH3KBP1) or CD2-binding protein 3 (CD2BP3) or Ruk, is an adaptor protein that is involved in the downregulation of receptor tyrosine kinases by facilitating endocytosis through interaction with endophilin-associated ubiquitin ligase Cbl proteins. It is also important in many other cellular processes including vesicle-mediated transport, cytoskeletal remodelling, apoptosis, cell adhesion and migration, and viral infection, among others. CIN85 exists as multiple variants from alternative splicing; the main variant contains three SH3 domains, a proline-rich region, and a C-terminal coiled-coil domain. All of these domains enable CIN85 to bind various protein partners and assemble complexes that have been implicated in many different functions. This alignment model represents the first SH3 domain (SH3A) of CIN85; SH3A binds to internal proline-rich motifs within the proline-rich region. This intramolecular interaction serves as a regulatory mechanism to keep CIN85 in a closed conformation, preventing the recruitment of other proteins. SH3A has also been shown to bind ubiquitin and to an atypical PXXXPR motif at the C-terminus of Cbl and the cytoplasmic end of the cell adhesion protein CD2. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212850 cd11917, SH3_Sorbs2_3, Third (or C-terminal) Src Homology 3 domain of Sorbin and SH3 domain containing 2 (Sorbs2), also called Arg-binding protein 2 (ArgBP2)

 Score = 38.1 bits (88), Expect = 3e-04
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 4/55 (7%)

Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQT--GWFPESYVE 224
           ++A+Y ++ RN DEL  + GD+I   V +  + GW  G  R     G FP +YV+
Sbjct: 7   FQALYNYMPRNEDELELREGDVI--DVMEKCDDGWFVGTSRRTKFFGTFPGNYVK 59

Sorbs2 or ArgBP2 is an adaptor protein containing one sorbin homology (SoHo) and three SH3 domains. It regulates actin-dependent processes including cell adhesion, morphology, and migration. It is expressed in many tissues and is abundant in the heart. Like vinexin, it is found in focal adhesion where it interacts with vinculin and afadin. It also localizes in epithelial cell stress fibers and in cardiac muscle cell Z-discs. Sorbs2 has been implicated to play roles in the signaling of c-Arg, Akt, and Pyk2. Other interaction partners of Sorbs2 include c-Abl, flotillin, spectrin, dynamin 1/2, synaptojanin, PTP-PEST, among others. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 61

>gnl|CDD|213018 cd12142, SH3_D21-like, Src Homology 3 domain of SH3 domain-containing protein 21 (SH3D21) and similar proteins

 Score = 37.4 bits (87), Expect = 4e-04
 Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 2/35 (5%)

Query: 283 GTVVPV--KQNAEPGWLAGELRGQTGWFPESYVEP 315
           G V+ V  K+  + GW  GEL G+ G+FP+++V P
Sbjct: 21  GDVIEVISKETEDEGWWEGELNGRRGFFPDNFVMP 55

N-terminal SH3 domain of the uncharacterized protein SH3 domain-containing protein 21, and similar uncharacterized domains, it belongs to the CD2AP-like_3 subfamily of proteins. The CD2AP-like_3 subfamily is composed of the third SH3 domain (SH3C) of CD2AP, CIN85 (Cbl-interacting protein of 85 kDa), and similar domains. CD2AP and CIN85 are adaptor proteins that bind to protein partners and assemble complexes that have been implicated in T cell activation, kidney function, and apoptosis of neuronal cells. They also associate with endocytic proteins, actin cytoskeleton components, and other adaptor proteins involved in receptor tyrosine kinase (RTK) signaling. CD2AP and the main isoform of CIN85 contain three SH3 domains, a proline-rich region, and a C-terminal coiled-coil domain. All of these domains enable CD2AP and CIN85 to bind various protein partners and assemble complexes that have been implicated in many different functions. SH3C of both proteins have been shown to bind to ubiquitin. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212979 cd12046, SH3_p67phox_C, C-terminal (or second) Src Homology 3 domain of the p67phox subunit of NADPH oxidase

 Score = 37.5 bits (87), Expect = 4e-04
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 119 YYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTG 154
             +A + Y++++P DL F + +VI V  K N DW  G
Sbjct: 1   QVVALFSYEASQPEDLEFQKGDVILVLSKVNEDWLEG 37

p67phox, also called Neutrophil cytosol factor 2 (NCF-2), is a cytosolic subunit of the phagocytic NADPH oxidase complex (also called Nox2 or gp91phox) which plays a crucial role in the cellular response to bacterial infection. NADPH oxidase catalyzes the transfer of electrons from NADPH to oxygen during phagocytosis forming superoxide and reactive oxygen species. p67phox plays a regulatory role and contains N-terminal TPR, first SH3 (or N-terminal or central SH3), PB1, and C-terminal SH3 domains. It binds, via its C-terminal SH3 domain, to a proline-rich region of p47phox and upon activation, this complex assembles with flavocytochrome b558, the Nox2-p22phox heterodimer. Concurrently, RacGTP translocates to the membrane and interacts with the TPR domain of p67phox, which leads to the activation of NADPH oxidase. The PB1 domain of p67phox binds to its partner PB1 domain in p40phox, and this facilitates the assembly of p47phox-p67phox at the membrane. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212907 cd11974, SH3_ASEF2, Src homology 3 domain of APC-Stimulated guanine nucleotide Exchange Factor 2

 Score = 37.7 bits (87), Expect = 4e-04
 Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 2/50 (4%)

Query: 174 AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYV 223
           A+++ V+ +  EL+F+ GD+I V    N +  W  G    +  WFP S+V
Sbjct: 5   ALWDHVTMDDQELAFKAGDVIRVLEASNKD--WWWGRNEDREAWFPASFV 52

ASEF2, also called Spermatogenesis-associated protein 13 (SPATA13), is a GEF that localizes with actin at the leading edge of cells and is important in cell migration and adhesion dynamics. GEFs activate small GTPases by exchanging bound GDP for free GTP. ASEF2 can activate both Rac 1 and Cdc42, but only Rac1 activation is necessary for increased cell migration and adhesion turnover. Together with APC (adenomatous polyposis coli) and Neurabin2, a scaffold protein that binds F-actin, it is involved in regulating HGF-induced cell migration. ASEF2 contains a SH3 domain followed by RhoGEF (also called Dbl-homologous or DH) and Pleckstrin Homology (PH) domains. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212860 cd11927, SH3_SH3RF1_1, First Src Homology 3 domain of SH3 domain containing ring finger protein 1, an E3 ubiquitin-protein ligase

 Score = 37.6 bits (87), Expect = 4e-04
 Identities = 16/52 (30%), Positives = 31/52 (59%), Gaps = 2/52 (3%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           +A+Y +  +   +L F  GDII++  ++  +  W  GE+ G  G+FP ++V+
Sbjct: 4   KALYNYEGKEPGDLKFSKGDIIIL--RRQVDENWYHGEVNGIHGFFPTNFVQ 53

SH3RF1 is also called POSH (Plenty of SH3s) or SH3MD2 (SH3 multiple domains protein 2). It is a scaffold protein that acts as an E3 ubiquitin-protein ligase. It plays a role in calcium homeostasis through the control of the ubiquitin domain protein Herp. It may also have a role in regulating death receptor mediated and JNK mediated apoptosis. SH3RF1 also enhances the ubiquitination of ROMK1 potassium channel resulting in its increased endocytosis. It contains an N-terminal RING finger domain and four SH3 domains. This model represents the first SH3 domain, located at the N-terminal half, of SH3RF1. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212869 cd11936, SH3_UBASH3B, Src homology 3 domain of Ubiquitin-associated and SH3 domain-containing protein B

 Score = 37.7 bits (87), Expect = 4e-04
 Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 4/57 (7%)

Query: 173 RAIYEFVSRNGDELSFQPGD-IIMVPVKQNA-EPGWLAGE--LRGQTGWFPESYVEP 225
           + IY +  +N DEL   PGD I M P++Q +   GW+ G     G +G  PE+Y+  
Sbjct: 5   QVIYPYTPQNDDELELVPGDYIFMSPMEQTSTSEGWIYGTSLTTGCSGLLPENYITK 61

UBASH3B, also called Suppressor of T cell receptor Signaling (STS)-1 or T cell Ubiquitin LigAnd (TULA)-2 is an active phosphatase that is expressed ubiquitously. The phosphatase activity of UBASH3B is essential for its roles in the suppression of TCR signaling and the regulation of EGFR. It also interacts with Syk and functions as a negative regulator of platelet glycoprotein VI signaling. TULA proteins contain an N-terminal UBA domain, a central SH3 domain, and a C-terminal histidine phosphatase domain. They bind c-Cbl through the SH3 domain and to ubiquitin via UBA. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 62

>gnl|CDD|212893 cd11960, SH3_Abp1_eu, Src homology 3 domain of eumetazoan Actin-binding protein 1

 Score = 37.8 bits (88), Expect = 4e-04
 Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 1/54 (1%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           R RA+Y++ + +  E+SF PGDII   ++Q  E  W      G  G FP +YVE
Sbjct: 1   RARALYDYQAADDTEISFDPGDII-TDIEQIDEGWWRGTGPDGTYGLFPANYVE 53

Abp1, also called drebrin-like protein, is an adaptor protein that functions in receptor-mediated endocytosis and vesicle trafficking. It contains an N-terminal actin-binding module, the actin-depolymerizing factor (ADF) homology domain, a helical domain, and a C-terminal SH3 domain. Mammalian Abp1, unlike yeast Abp1, does not contain an acidic domain that interacts with the Arp2/3 complex. It regulates actin dynamics indirectly by interacting with dynamin and WASP family proteins. Abp1 deficiency causes abnormal organ structure and function of the spleen, heart, and lung of mice. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212980 cd12047, SH3_Noxa1_C, C-terminal Src Homology 3 domain of NADPH oxidase activator 1

 Score = 37.5 bits (87), Expect = 4e-04
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 2/55 (3%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
           R  A +++ ++  ++L F  GD I +  + N E  WL G   G+ G FP+ +   
Sbjct: 1   RMVAQHDYSAQGPEDLEFSQGDTIDILSEVNQE--WLEGHCDGRIGIFPKCFAVR 53

Noxa1 is a homolog of p67phox and is a cytosolic subunit of the nonphagocytic NADPH oxidase complex Nox1, which catalyzes the transfer of electrons from NADPH to molecular oxygen to form superoxide. Noxa1 is co-expressed with Nox1 in colon, stomach, uterus, prostate, and vascular smooth muscle cells, consistent with its regulatory role. It does not interact with p40phox, unlike p67phox, making Nox1 activity independent of p40phox, unlike Nox2. Noxa1 contains TPR, PB1, and C-terminal SH3 domains, but lacks the central SH3 domain that is present in p67phox. The TPR domain binds activated GTP-bound Rac. The C-terminal SH3 domain binds the polyproline motif found at the C-terminus of Noxo1, a homolog of p47phox. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212993 cd12060, SH3_alphaPIX, Src Homology 3 domain of alpha-Pak Interactive eXchange factor

 Score = 37.3 bits (86), Expect = 5e-04
 Identities = 15/32 (46%), Positives = 20/32 (62%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVE 314
           G ++ V +  E GW  G L G+TGWFP +YV 
Sbjct: 23  GDIIYVTRVEEGGWWEGTLNGKTGWFPSNYVR 54

Alpha-PIX, also called Rho guanine nucleotide exchange factor 6 (ARHGEF6) or Cool (Cloned out of Library)-2, activates small GTPases by exchanging bound GDP for free GTP. It acts as a GEF for both Cdc42 and Rac 1, and is localized in dendritic spines where it regulates spine morphogenesis. It controls dendritic length and spine density in the hippocampus. Mutations in the ARHGEF6 gene cause X-linked intellectual disability in humans. PIX proteins contain an N-terminal SH3 domain followed by RhoGEF (also called Dbl-homologous or DH) and Pleckstrin Homology (PH) domains, and a C-terminal leucine-zipper domain for dimerization. The SH3 domain of PIX binds to an atypical PxxxPR motif in p21-activated kinases (PAKs) with high affinity. The binding of PAKs to PIX facilitate the localization of PAKs to focal complexes and also localizes PAKs to PIX targets Cdc43 and Rac, leading to the activation of PAKs. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 58

>gnl|CDD|212703 cd11769, SH3_CSK, Src Homology 3 domain of C-terminal Src kinase

 Score = 37.3 bits (87), Expect = 5e-04
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 2/52 (3%)

Query: 174 AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGW-LAGELRGQTGWFPESYVE 224
           A Y F   + ++L F+ GDI+ + V    +P W  A    G+ G  P +YV+
Sbjct: 6   AKYNFNGASEEDLPFKKGDILTI-VAVTKDPNWYKAKNKDGREGMIPANYVQ 56

CSK is a cytoplasmic (or nonreceptor) tyr kinase containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, CSK is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. CSK catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. It is expressed in a wide variety of tissues and plays a role, as a regulator of Src, in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, CSK also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 57

>gnl|CDD|212783 cd11849, SH3_SPIN90, Src homology 3 domain of SH3 protein interacting with Nck, 90 kDa (SPIN90)

 Score = 37.3 bits (87), Expect = 5e-04
 Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 1/53 (1%)

Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           YRA+Y+F S   + LSF  G+  ++  + NA   WL     G+TG+ P +YV+
Sbjct: 2   YRALYDFKSAEPNTLSFSEGETFLLLERSNAH-WWLVTNHSGETGYVPANYVK 53

SPIN90 is also called NCK interacting protein with SH3 domain (NCKIPSD), Dia-interacting protein (DIP), 54 kDa vimentin-interacting protein (VIP54), or WASP-interacting SH3-domain protein (WISH). It is an F-actin binding protein that regulates actin polymerization and endocytosis. It associates with the Arp2/3 complex near actin filaments and determines filament localization at the leading edge of lamellipodia. SPIN90 is expressed in the early stages of neuronal differentiation and plays a role in regulating growth cone dynamics and neurite outgrowth. It also interacts with IRSp53 and regulates cell motility by playing a role in the formation of membrane protrusions. SPIN90 contains an N-terminal SH3 domain, a proline-rich domain, and a C-terminal VCA (verprolin-homology and cofilin-like acidic) domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212722 cd11788, SH3_RasGAP, Src Homology 3 domain of Ras GTPase-Activating Protein 1

 Score = 37.4 bits (87), Expect = 5e-04
 Identities = 23/59 (38%), Positives = 27/59 (45%), Gaps = 5/59 (8%)

Query: 170 RRYRAIYEFVSRNG-DELSFQPGDIIMVPVKQNAEPGWLAGELR--GQTGWFPESYVEP 225
           RR RAI  +      DELSFQ GDI +  V    E GWL       G++G      VE 
Sbjct: 2   RRVRAILPYNKVPDTDELSFQKGDIFV--VHNELEDGWLWVTSLRTGESGLVFRDLVEE 58

RasGAP, also called Ras p21 protein activator, RASA1, or p120RasGAP, is part of the GAP1 family of GTPase-activating proteins. It is a 120kD cytosolic protein containing an SH3 domain flanked by two SH2 domains at the N-terminal end, a pleckstrin homology (PH) domain, a calcium dependent phospholipid binding domain (CaLB/C2), and a C-terminal catalytic GAP domain. It stimulates the GTPase activity of normal RAS p21. It acts as a positive effector of Ras in tumor cells. It also functions as a regulator downstream of tyrosine receptors such as those of PDGF, EGF, ephrin, and insulin, among others. The SH3 domain of RasGAP is unable to bind proline-rich sequences but have been shown to interact with protein partners such as the G3BP protein, Aurora kinases, and the Calpain small subunit 1. The RasGAP SH3 domain is necessary for the downstream signaling of Ras and it also influences Rho-mediated cytoskeletal reorganization. SH3 domains are protein interaction domains that typically bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 59

>gnl|CDD|212927 cd11994, SH3_Intersectin2_4, Fourth Src homology 3 domain (or SH3D) of Intersectin-2

 Score = 37.2 bits (86), Expect = 5e-04
 Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 7/46 (15%)

Query: 184 DELSFQPGDIIMVPVKQNAEPGWLAGEL--RG---QTGWFPESYVE 224
           ++LS  PG +I++ +K+N+  GW  GEL  RG   Q GWFP S+V+
Sbjct: 14  EQLSLSPGQLILI-LKKNSS-GWWLGELQARGKKRQKGWFPASHVK 57

Intersectin-2 (ITSN2) is an adaptor protein that functions in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. It plays a role in clathrin-coated pit (CCP) formation. It binds to many proteins through its multidomain structure and facilitate the assembly of multimeric complexes. ITSN2 also functions as a specific GEF for Cdc42 activation in epithelial morphogenesis, and is required in mitotic spindle orientation. It exists in alternatively spliced short and long isoforms. The short isoform contains two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoform, in addition, contains RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. The fourth SH3 domain (or SH3D) of ITSN2 is expected to bind protein partners, similar to ITSN1 which has been shown to bind SHIP2, Numb, CdGAP, and N-WASP. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 59

>gnl|CDD|212941 cd12008, SH3_Src, Src homology 3 domain of Src Protein Tyrosine Kinase

 Score = 37.4 bits (86), Expect = 6e-04
 Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 2/55 (3%)

Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR-GQTGWFPESYVEP 225
           + A+Y++ SR   +LSF+ G+ + + V       WLA  L  GQTG+ P +YV P
Sbjct: 2   FVALYDYESRTETDLSFKKGERLQI-VNNTEGDWWLAHSLTTGQTGYIPSNYVAP 55

Src (or c-Src) is a cytoplasmic (or non-receptor) PTK and is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells, and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The SH3 domain of Src kinases contributes to substrate recruitment by binding adaptor proteins/substrates, and regulation of kinase activity through an intramolecular interaction. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 56

>gnl|CDD|212735 cd11801, SH3_JIP1_like, Src homology 3 domain of JNK-interacting proteins 1 and 2, and similar domains

 Score = 36.9 bits (86), Expect = 6e-04
 Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 4/54 (7%)

Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAG-ELR-GQTGWFPESYV 223
           +RA+++F+ R+ DE+    GD +   V+Q A+  W  G  LR GQ G FP +YV
Sbjct: 2   HRALHKFIPRHEDEIELDIGDPVY--VEQEADDLWCEGTNLRTGQRGIFPAAYV 53

JNK-interacting proteins (JIPs) function as scaffolding proteins for c-Jun N-terminal kinase (JNK) signaling pathways. They bind to components of Mitogen-activated protein kinase (MAPK) pathways such as JNK, MKK, and several MAP3Ks such as MLK and DLK. There are four JIPs (JIP1-4); all contain a JNK binding domain. JIP1 and JIP2 also contain SH3 and Phosphotyrosine-binding (PTB) domains. Both are highly expressed in the brain and pancreatic beta-cells. JIP1 functions as an adaptor linking motor to cargo during axonal transport and also is involved in regulating insulin secretion. JIP2 form complexes with fibroblast growth factor homologous factors (FHFs), which facilitates activation of the p38delta MAPK. The SH3 domain of JIP1 homodimerizes at the interface usually involved in proline-rich ligand recognition, despite the lack of this motif in the domain itself. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212781 cd11847, SH3_Brk, Src homology 3 domain of Brk (Breast tumor kinase) Protein Tyrosine Kinase (PTK), also called PTK6

 Score = 37.2 bits (86), Expect = 6e-04
 Identities = 10/40 (25%), Positives = 19/40 (47%)

Query: 120 YIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGTIGDR 159
           Y A + + +    +L+F   +   + ++  DWWT    DR
Sbjct: 2   YKALWDFKARGDEELSFQAGDQFRIAERSGDWWTALKLDR 41

Brk is a cytoplasmic (or non-receptor) PTK with limited homology to Src kinases. It has been found to be overexpressed in a majority of breast tumors. It plays roles in normal cell differentiation, proliferation, survival, migration, and cell cycle progression. Brk substrates include RNA-binding proteins (SLM-1/2, Sam68), transcription factors (STAT3/5), and signaling molecules (Akt, paxillin, IRS-4). Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). However, Brk lacks the N-terminal myristoylation site. The SH3 domain of Src kinases contributes to substrate recruitment by binding adaptor proteins/substrates, and regulation of kinase activity through an intramolecular interaction. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 58

>gnl|CDD|212906 cd11973, SH3_ASEF, Src homology 3 domain of APC-Stimulated guanine nucleotide Exchange Factor

 Score = 37.7 bits (87), Expect = 6e-04
 Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 2/50 (4%)

Query: 174 AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYV 223
           A+++ V+ +  EL F+ GD+I V    N E  W  G +    GWFP S+V
Sbjct: 22  ALWDHVTMDDQELGFKAGDVIEVMDATNKE--WWWGRVLDSEGWFPASFV 69

ASEF, also called ARHGEF4, exists in an autoinhibited form and is activated upon binding of the tumor suppressor APC (adenomatous polyposis coli). GEFs activate small GTPases by exchanging bound GDP for free GTP. ASEF can activate Rac1 or Cdc42. Truncated ASEF, which is found in colorectal cancers, is constitutively active and has been shown to promote angiogenesis and cancer cell migration. ASEF contains a SH3 domain followed by RhoGEF (also called Dbl-homologous or DH) and Pleckstrin Homology (PH) domains. In its autoinhibited form, the SH3 domain of ASEF forms an extensive interface with the DH and PH domains, blocking the Rac binding site. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 73

>gnl|CDD|212810 cd11877, SH3_PIX, Src Homology 3 domain of Pak Interactive eXchange factors

 Score = 36.9 bits (86), Expect = 7e-04
 Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 1/43 (2%)

Query: 122 AAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTARF 163
           A + ++ T   +L+F++ ++I VT+  E  WW GT+  +T  F
Sbjct: 4   AKFNFEGTNEDELSFDKGDIITVTQVVEGGWWEGTLNGKTGWF 46

PIX proteins are Rho guanine nucleotide exchange factors (GEFs), which activate small GTPases by exchanging bound GDP for free GTP. They act as GEFs for both Cdc42 and Rac 1, and have been implicated in cell motility, adhesion, neurite outgrowth, and cell polarity. Vertebrates contain two proteins from the PIX subfamily, alpha-PIX and beta-PIX. Alpha-PIX, also called ARHGEF6, is localized in dendritic spines where it regulates spine morphogenesis. Mutations in the ARHGEF6 gene cause X-linked intellectual disability in humans. Beta-PIX play roles in regulating neuroendocrine exocytosis, focal adhesion maturation, cell migration, synaptic vesicle localization, and insulin secretion. PIX proteins contain an N-terminal SH3 domain followed by RhoGEF (also called Dbl-homologous or DH) and Pleckstrin Homology (PH) domains, and a C-terminal leucine-zipper domain for dimerization. The SH3 domain of PIX binds to an atypical PxxxPR motif in p21-activated kinases (PAKs) with high affinity. The binding of PAKs to PIX facilitate the localization of PAKs to focal complexes and also localizes PAKs to PIX targets Cdc43 and Rac, leading to the activation of PAKs. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212834 cd11901, SH3_Nck1_2, Second Src Homology 3 domain of Nck1 adaptor protein

 Score = 36.9 bits (85), Expect = 7e-04
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 2/48 (4%)

Query: 176 YEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYV 223
           + + +   DELS   G  ++V   +    GW  G   GQ GWFP +YV
Sbjct: 8   FNYTAEREDELSLVKGTKVIV--MEKCSDGWWRGSYNGQVGWFPSNYV 53

Nck1 (also called Nckalpha) plays a crucial role in connecting signaling pathways of tyrosine kinase receptors and important effectors in actin dynamics and cytoskeletal remodeling. It binds and activates RasGAP, resulting in the downregulation of Ras. It is also involved in the signaling of endothilin-mediated inhibition of cell migration. Nck adaptor proteins regulate actin cytoskeleton dynamics by linking proline-rich effector molecules to protein tyrosine kinases and phosphorylated signaling intermediates. They contain three SH3 domains and a C-terminal SH2 domain. They function downstream of the PDGFbeta receptor and are involved in Rho GTPase signaling and actin dynamics. Vertebrates contain two Nck adaptor proteins: Nck1 (also called Nckalpha) and Nck2, which show partly overlapping functions but also bind distinct targets. The second SH3 domain of Nck appears to prefer ligands containing the APxxPxR motif. SH3 domains are protein interaction domains that usually bind to proline-rich ligands with moderate affinity and selectivity, preferentially a PxxP motif. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212882 cd11949, SH3_GRB2_C, C-terminal Src homology 3 domain of Growth factor receptor-bound protein 2

 Score = 36.7 bits (85), Expect = 8e-04
 Identities = 15/33 (45%), Positives = 19/33 (57%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEP 315
           G  + V  N++P W  G   GQTG FP +YV P
Sbjct: 21  GDFIEVMDNSDPNWWKGACHGQTGMFPRNYVTP 53

GRB2 is a critical signaling molecule that regulates the Ras pathway by linking tyrosine kinases to the Ras guanine nucleotide releasing protein Sos (son of sevenless), which converts Ras to the active GTP-bound state. It is ubiquitously expressed in all tissues throughout development and is important in cell cycle progression, motility, morphogenesis, and angiogenesis. In lymphocytes, GRB2 is associated with antigen receptor signaling components. GRB2 contains an N-terminal SH3 domain, a central SH2 domain, and a C-terminal SH3 domain. The C-terminal SH3 domain of GRB2 binds to Gab2 (Grb2-associated binder 2) through epitopes containing RxxK motifs, as well as to the proline-rich C-terminus of FGRF2. SH3 domains are protein interaction domains that typically bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212717 cd11783, SH3_SH3RF_3, Third Src Homology 3 domain of SH3 domain containing ring finger 1 (SH3RF1), SH3RF3, and similar domains

 Score = 36.6 bits (85), Expect = 8e-04
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 4/57 (7%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE--LRGQTGWFPESYVEP 225
            Y A+Y +  +  DEL  + G++  V  K     GW  G     GQ+G FP +YV+P
Sbjct: 1   IYVALYPYKPQKPDELELRKGEMYTVTEKCQ--DGWFKGTSLRTGQSGVFPGNYVQP 55

SH3RF1 (or POSH) and SH3RF3 (or POSH2) are scaffold proteins that function as E3 ubiquitin-protein ligases. They contain an N-terminal RING finger domain and four SH3 domains. This model represents the third SH3 domain, located in the middle of SH3RF1 and SH3RF3, and similar domains. SH3RF1 plays a role in calcium homeostasis through the control of the ubiquitin domain protein Herp. It may also have a role in regulating death receptor mediated and JNK mediated apoptosis. SH3RF3 interacts with p21-activated kinase 2 (PAK2) and GTP-loaded Rac1. It may play a role in regulating JNK mediated apoptosis in certain conditions. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212994 cd12061, SH3_betaPIX, Src Homology 3 domain of beta-Pak Interactive eXchange factor

 Score = 36.6 bits (84), Expect = 9e-04
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)

Query: 122 AAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTIGDRTARF 163
           A + +  T   +L+F++ +VI+VT+ E   WW GT   RT  F
Sbjct: 4   AKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWEGTHNGRTGWF 46

Beta-PIX, also called Rho guanine nucleotide exchange factor 7 (ARHGEF7) or Cool (Cloned out of Library)-1, activates small GTPases by exchanging bound GDP for free GTP. It acts as a GEF for both Cdc42 and Rac 1, and plays important roles in regulating neuroendocrine exocytosis, focal adhesion maturation, cell migration, synaptic vesicle localization, and insulin secretion. PIX proteins contain an N-terminal SH3 domain followed by RhoGEF (also called Dbl-homologous or DH) and Pleckstrin Homology (PH) domains, and a C-terminal leucine-zipper domain for dimerization. The SH3 domain of PIX binds to an atypical PxxxPR motif in p21-activated kinases (PAKs) with high affinity. The binding of PAKs to PIX facilitate the localization of PAKs to focal complexes and also localizes PAKs to PIX targets Cdc43 and Rac, leading to the activation of PAKs. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212779 cd11845, SH3_Src_like, Src homology 3 domain of Src kinase-like Protein Tyrosine Kinases

 Score = 36.4 bits (85), Expect = 9e-04
 Identities = 10/34 (29%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 120 YIAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWW 152
           Y+A Y Y++    DL+F + + + +    + DWW
Sbjct: 2   YVALYDYEARTDDDLSFKKGDRLQILDDSDGDWW 35

Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, Yes, and Brk. Src (or c-Src) proteins are cytoplasmic (or non-receptor) PTKs which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). However, Brk lacks the N-terminal myristoylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells, and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, Lyn, and Brk show a limited expression pattern. This subfamily also includes Drosophila Src42A, Src oncogene at 42A (also known as Dsrc41) which accumulates at sites of cell-cell or cell-matrix adhesion, and participates in Drosphila development and wound healing. It has been shown to promote tube elongation in the tracheal system, is essential for proper cell-cell matching during dorsal closure, and regulates cell-cell contacts in developing Drosophila eyes. The SH3 domain of Src kinases contributes to substrate recruitment by binding adaptor proteins/substrates, and regulation of kinase activity through an intramolecular interaction. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 52

>gnl|CDD|212940 cd12007, SH3_Yes, Src homology 3 domain of Yes Protein Tyrosine Kinase

 Score = 36.9 bits (85), Expect = 9e-04
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 4/58 (6%)

Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE--LRGQTGWFPESYVEPCD 227
           + A+Y++ +R  ++LSF+ G+     +  N E  W        G+ G+ P +YV P D
Sbjct: 3   FVALYDYEARTTEDLSFKKGE--RFQIINNTEGDWWEARSIATGKNGYIPSNYVAPAD 58

Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The SH3 domain of Src kinases contributes to substrate recruitment by binding adaptor proteins/substrates, and regulation of kinase activity through an intramolecular interaction. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 58

>gnl|CDD|212925 cd11992, SH3_Intersectin2_3, Third Src homology 3 domain (or SH3C) of Intersectin-2

 Score = 36.1 bits (83), Expect = 0.001
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 3/54 (5%)

Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
           Y A+Y + S    +L+F  G+ I+V  K      W  G +  +TG FP +YV P
Sbjct: 2   YIALYPYSSSEPGDLTFNEGEEILVTQKDGE---WWTGSIEDRTGIFPSNYVRP 52

Intersectin-2 (ITSN2) is an adaptor protein that functions in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. It plays a role in clathrin-coated pit (CCP) formation. It binds to many proteins through its multidomain structure and facilitate the assembly of multimeric complexes. ITSN2 also functions as a specific GEF for Cdc42 activation in epithelial morphogenesis, and is required in mitotic spindle orientation. It exists in alternatively spliced short and long isoforms. The short isoform contains two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoform, in addition, contains RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. The third SH3 domain (SH3C) of ITSN2 has been shown to bind the K15 protein of Kaposi's sarcoma-associated herpesvirus. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 52

>gnl|CDD|212764 cd11830, SH3_VAV_2, C-terminal (or second) Src homology 3 domain of VAV proteins

 Score = 36.1 bits (83), Expect = 0.001
 Identities = 12/20 (60%), Positives = 15/20 (75%)

Query: 295 GWLAGELRGQTGWFPESYVE 314
           GW  GE+ G+ GWFP +YVE
Sbjct: 34  GWWRGEINGRIGWFPSTYVE 53

VAV proteins function both as cytoplasmic guanine nucleotide exchange factors (GEFs) for Rho GTPases and scaffold proteins and they play important roles in cell signaling by coupling cell surface receptors to various effector functions. They play key roles in processes that require cytoskeletal reorganization including immune synapse formation, phagocytosis, cell spreading, and platelet aggregation, among others. Vertebrates have three VAV proteins (VAV1, VAV2, and VAV3). VAV proteins contain several domains that enable their function: N-terminal calponin homology (CH), acidic, RhoGEF (also called Dbl-homologous or DH), Pleckstrin Homology (PH), C1 (zinc finger), SH2, and two SH3 domains. The SH3 domain of VAV is involved in the localization of proteins to specific sites within the cell, by interacting with proline-rich sequences within target proteins. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212727 cd11793, SH3_ephexin1_like, Src homology 3 domain of ephexin-1-like SH3 domain containing Rho guanine nucleotide exchange factors

 Score = 36.5 bits (85), Expect = 0.001
 Identities = 18/35 (51%), Positives = 20/35 (57%), Gaps = 2/35 (5%)

Query: 282 LGTVVPVKQNAEPGWLAGE-LR-GQTGWFPESYVE 314
            G VV V +    GW  GE LR G+ GWFP SY E
Sbjct: 20  EGDVVNVLRKMPDGWYEGERLRDGERGWFPSSYTE 54

Members of this family contain RhoGEF (also called Dbl-homologous or DH), Pleckstrin Homology (PH), and C-terminal SH3 domains. They include the Rho guanine nucleotide exchange factors ARHGEF5, ARHGEF16, ARHGEF19, ARHGEF26, ARHGEF27 (also called ephexin-1), and similar proteins, and are also called ephexins because they interact directly with ephrin A receptors. GEFs interact with Rho GTPases via their DH domains to catalyze nucleotide exchange by stabilizing the nucleotide-free GTPase intermediate. They play important roles in neuronal development. The SH3 domains of ARHGEFs play an autoinhibitory role through intramolecular interactions with a proline-rich region N-terminal to the DH domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|219499 pfam07653, SH3_2, Variant SH3 domain

 Score = 36.3 bits (85), Expect = 0.001
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 119 YYIAAYPYDSTEPGDLTFNQDEVIYVTKKE-NDWWTGTIGDRTARF 163
           Y    + Y +T+P +L+  + +V+ V  K+ N WW G  G R    
Sbjct: 1   YGRVIFDYVATDPNELSLKKGDVVKVLDKDDNGWWEGERGGRRGLV 46

SH3 (Src homology 3) domains are often indicative of a protein involved in signal transduction related to cytoskeletal organisation. First described in the Src cytoplasmic tyrosine kinase. The structure is a partly opened beta barrel. Length = 53

>gnl|CDD|212847 cd11914, SH3_BAIAP2L2, Src Homology 3 domain of Brain-specific Angiogenesis Inhibitor 1-Associated Protein 2-Like 2

 Score = 35.9 bits (83), Expect = 0.001
 Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 5/33 (15%)

Query: 285 VVPVKQNAEPGWLAGELRGQT--GWFPESYVEP 315
           +VP  +N   GWL G+L G +  GWFPE+YV+ 
Sbjct: 29  LVPEARN---GWLYGKLEGSSRQGWFPEAYVKA 58

BAIAP2L2 co-localizes with clathrin plaques but its function has not been determined. It contains an N-terminal IMD or Inverse-Bin/Amphiphysin/Rvs (I-BAR) domain, an SH3 domain, and a WASP homology 2 (WH2) actin-binding motif at the C-terminus. The related proteins, BAIAP2L1 and IRSp53, function as regulators of membrane dynamics and the actin cytoskeleton. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 59

>gnl|CDD|212806 cd11873, SH3_CD2AP-like_1, First Src Homology 3 domain (SH3A) of CD2-associated protein and similar proteins

 Score = 35.7 bits (83), Expect = 0.001
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)

Query: 120 YIAAYPYDSTEPGDLTFNQDEVIY-VTKKENDWWTGTIGDRTARF 163
            I  + YD+ EP +LT    ++I  V K E  WW GT+  +   F
Sbjct: 2   VIVEFDYDAEEPDELTLKVGDIITNVKKMEEGWWEGTLNGKRGMF 46

This subfamily is composed of the first SH3 domain (SH3A) of CD2AP, CIN85 (Cbl-interacting protein of 85 kDa), and similar domains. CD2AP and CIN85 are adaptor proteins that bind to protein partners and assemble complexes that have been implicated in T cell activation, kidney function, and apoptosis of neuronal cells. They also associate with endocytic proteins, actin cytoskeleton components, and other adaptor proteins involved in receptor tyrosine kinase (RTK) signaling. CD2AP and the main isoform of CIN85 contain three SH3 domains, a proline-rich region, and a C-terminal coiled-coil domain. All of these domains enable CD2AP and CIN85 to bind various protein partners and assemble complexes that have been implicated in many different functions. SH3A of both proteins bind to an atypical PXXXPR motif at the C-terminus of Cbl and the cytoplasmic domain of the cell adhesion protein CD2. CIN85 SH3A binds to internal proline-rich motifs within the proline-rich region; this intramolecular interaction serves as a regulatory mechanism to keep CIN85 in a closed conformation, preventing the recruitment of other proteins. CIN85 SH3A has also been shown to bind ubiquitin. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212923 cd11990, SH3_Intersectin2_2, Second Src homology 3 domain (or SH3B) of Intersectin-2

 Score = 36.6 bits (84), Expect = 0.001
 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)

Query: 285 VVPVKQNAEPGWLAGELRGQTGWFPESYVE 314
           ++ V +  E  W  GE+ G  GWFP+SYV+
Sbjct: 23  IITVLEQQENWWF-GEVHGGRGWFPKSYVK 51

Intersectin-2 (ITSN2) is an adaptor protein that functions in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. It plays a role in clathrin-coated pit (CCP) formation. It binds to many proteins through its multidomain structure and facilitate the assembly of multimeric complexes. ITSN2 also functions as a specific GEF for Cdc42 activation in epithelial morphogenesis, and is required in mitotic spindle orientation. It exists in alternatively spliced short and long isoforms. The short isoform contains two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoform, in addition, contains RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. The second SH3 domain (or SH3B) of ITSN2 is expected to bind protein partners, similar to ITSN1 which has been shown to bind WNK and CdGAP. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 52

>gnl|CDD|212835 cd11902, SH3_Nck2_2, Second Src Homology 3 domain of Nck2 adaptor protein

 Score = 36.1 bits (83), Expect = 0.001
 Identities = 14/31 (45%), Positives = 17/31 (54%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYV 313
           G+ V V +    GW  G   GQ GWFP +YV
Sbjct: 22  GSRVTVMEKCSDGWWRGSYNGQIGWFPSNYV 52

Nck2 (also called Nckbeta or Growth factor receptor-bound protein 4, Grb4) plays a crucial role in connecting signaling pathways of tyrosine kinase receptors and important effectors in actin dynamics and cytoskeletal remodeling. It binds neuronal signaling proteins such as ephrinB and Disabled-1 (Dab-1) exclusively. Nck adaptor proteins regulate actin cytoskeleton dynamics by linking proline-rich effector molecules to protein tyrosine kinases and phosphorylated signaling intermediates. They contain three SH3 domains and a C-terminal SH2 domain. They function downstream of the PDGFbeta receptor and are involved in Rho GTPase signaling and actin dynamics. Vertebrates contain two Nck adaptor proteins: Nck1 (also called Nckalpha) and Nck2, which show partly overlapping functions but also bind distinct targets. The second SH3 domain of Nck appears to prefer ligands containing the APxxPxR motif. SH3 domains are protein interaction domains that usually bind to proline-rich ligands with moderate affinity and selectivity, preferentially a PxxP motif. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212860 cd11927, SH3_SH3RF1_1, First Src Homology 3 domain of SH3 domain containing ring finger protein 1, an E3 ubiquitin-protein ligase

 Score = 36.1 bits (83), Expect = 0.001
 Identities = 12/37 (32%), Positives = 24/37 (64%), Gaps = 1/37 (2%)

Query: 122 AAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIG 157
           A Y Y+  EPGDL F++ ++I + ++ + +W+ G + 
Sbjct: 5   ALYNYEGKEPGDLKFSKGDIIILRRQVDENWYHGEVN 41

SH3RF1 is also called POSH (Plenty of SH3s) or SH3MD2 (SH3 multiple domains protein 2). It is a scaffold protein that acts as an E3 ubiquitin-protein ligase. It plays a role in calcium homeostasis through the control of the ubiquitin domain protein Herp. It may also have a role in regulating death receptor mediated and JNK mediated apoptosis. SH3RF1 also enhances the ubiquitination of ROMK1 potassium channel resulting in its increased endocytosis. It contains an N-terminal RING finger domain and four SH3 domains. This model represents the first SH3 domain, located at the N-terminal half, of SH3RF1. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212936 cd12003, SH3_EFS, Src homology 3 domain of CAS (Crk-Associated Substrate) scaffolding protein family member, Embryonal Fyn-associated Substrate

 Score = 36.8 bits (85), Expect = 0.001
 Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 1/48 (2%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAE-PGWLAGELRGQTGWFP 219
           +A+Y+  + + +ELSF+ GD++MV  +++   PGW    L GQ G  P
Sbjct: 4   KALYDNAAESPEELSFRRGDVLMVLKREHGSLPGWWLCSLHGQQGIAP 51

EFS is also called HEFS, CASS3 (Cas scaffolding protein family member 3) or SIN (Src-interacting protein). It was identified based on interactions with the Src kinases, Fyn and Yes. It plays a role in thymocyte development and acts as a negative regulator of T cell proliferation. CAS proteins function as molecular scaffolds to regulate protein complexes that are involved in many cellular processes. They share a common domain structure that includes an N-terminal SH3 domain, an unstructured substrate domain that contains many YxxP motifs, a serine-rich four-helix bundle, and a FAT-like C-terminal domain. The SH3 domain of CAS proteins binds to diverse partners including FAK, FRNK, Pyk2, PTP-PEST, DOCK180, among others. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 62

>gnl|CDD|212949 cd12016, SH3_Tks_2, Second Src homology 3 domain of Tyrosine kinase substrate (Tks) proteins

 Score = 36.3 bits (84), Expect = 0.001
 Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 2/54 (3%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           +Y     + + N DE+ F+ G ++ V +++N + GW     +G+ GW P +Y++
Sbjct: 2   KYITTQAYKAENEDEIGFETGVVVEV-IQKNLD-GWWKIRYQGKEGWAPATYLK 53

Tks proteins are Src substrates and scaffolding proteins that play important roles in the formation of podosomes and invadopodia, the dynamic actin-rich structures that are related to cell migration and cancer cell invasion. Vertebrates contain two Tks proteins, Tks4 (Tyr kinase substrate with four SH3 domains) and Tks5 (Tyr kinase substrate with five SH3 domains), which display partially overlapping but non-redundant functions. Both associate with the ADAMs family of transmembrane metalloproteases, which function as sheddases and mediators of cell and matrix interactions. Tks5 interacts with N-WASP and Nck, while Tks4 is essential for the localization of MT1-MMP (membrane-type 1 matrix metalloproteinase) to invadopodia. Tks proteins contain an N-terminal Phox homology (PX) domain and four or five SH3 domains. This model characterizes the second SH3 domain of Tks proteins. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212889 cd11956, SH3_srGAP4, Src homology 3 domain of Slit-Robo GTPase Activating Protein 4

 Score = 36.4 bits (84), Expect = 0.001
 Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 2/50 (4%)

Query: 174 AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYV 223
           A +++  R   ELSF+ GD++++  K +++  W  GE  G  G  P  Y+
Sbjct: 6   ACFDYTGRTAQELSFKRGDVLLLHSKASSD--WWRGEHNGMRGLIPHKYI 53

srGAP4, also called ARHGAP4, is highly expressed in hematopoietic cells and may play a role in lymphocyte differentiation. It is able to stimulate the GTPase activity of Rac1, Cdc42, and RhoA. In the nervous system, srGAP4 has been detected in differentiating neurites and may be involved in axon and dendritic growth. srGAPs are Rho GAPs that interact with Robo1, the transmembrane receptor of Slit proteins. Slit proteins are secreted proteins that control axon guidance and the migration of neurons and leukocytes. srGAPs contain an N-terminal F-BAR domain, a Rho GAP domain, and a C-terminal SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212837 cd11904, SH3_Nck1_3, Third Src Homology 3 domain of Nck1 adaptor protein

 Score = 36.5 bits (84), Expect = 0.001
 Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWL-AGELRGQTGWFPESYV 223
           +A+Y F S N +EL+F+ G+++ V  K   +P W    +  GQ G  P++YV
Sbjct: 4   QALYPFSSSNDEELNFEKGEVMDVIEKPENDPEWWKCRKANGQVGLVPKNYV 55

Nck1 (also called Nckalpha) plays a crucial role in connecting signaling pathways of tyrosine kinase receptors and important effectors in actin dynamics and cytoskeletal remodeling. It binds and activates RasGAP, resulting in the downregulation of Ras. It is also involved in the signaling of endothilin-mediated inhibition of cell migration. Nck adaptor proteins regulate actin cytoskeleton dynamics by linking proline-rich effector molecules to protein tyrosine kinases and phosphorylated signaling intermediates. They contain three SH3 domains and a C-terminal SH2 domain. They function downstream of the PDGFbeta receptor and are involved in Rho GTPase signaling and actin dynamics. Vertebrates contain two Nck adaptor proteins: Nck1 (also called Nckalpha) and Nck2, which show partly overlapping functions but also bind distinct targets. The third SH3 domain of Nck appears to prefer ligands with a PxAPxR motif. SH3 domains are protein interaction domains that usually bind to proline-rich ligands with moderate affinity and selectivity, preferentially a PxxP motif. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 57

>gnl|CDD|212804 cd11871, SH3_p67phox_N, N-terminal (or first) Src Homology 3 domain of the p67phox subunit of NADPH oxidase

 Score = 36.0 bits (83), Expect = 0.001
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)

Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
           +R +YEFV    +EL   PG+I+ V  K      W      G+ G  P +++EP
Sbjct: 2   HRVLYEFVPETKEELQVLPGNIVFVLKKGT--DNWATVVFNGKKGLVPCNFLEP 53

p67phox, also called Neutrophil cytosol factor 2 (NCF-2), is a cytosolic subunit of the phagocytic NADPH oxidase complex (also called Nox2 or gp91phox) which plays a crucial role in the cellular response to bacterial infection. NADPH oxidase catalyzes the transfer of electrons from NADPH to oxygen during phagocytosis forming superoxide and reactive oxygen species. p67phox plays a regulatory role and contains N-terminal TPR, first SH3 (or N-terminal or central SH3), PB1, and C-terminal SH3 domains. It binds, via its C-terminal SH3 domain, to a proline-rich region of p47phox and upon activation, this complex assembles with flavocytochrome b558, the Nox2-p22phox heterodimer. Concurrently, RacGTP translocates to the membrane and interacts with the TPR domain of p67phox, which leads to the activation of NADPH oxidase. The PB1 domain of p67phox binds to its partner PB1 domain in p40phox, and this facilitates the assembly of p47phox-p67phox at the membrane. The N-terminal SH3 domain increases the affinity of p67phox for the oxidase complex. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212734 cd11800, SH3_DNMBP_C2_like, Second C-terminal Src homology 3 domain of Dynamin Binding Protein, also called Tuba, and similar domains

 Score = 36.2 bits (84), Expect = 0.001
 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 2/56 (3%)

Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAE--PGWLAGELRGQTGWFPESYVEP 225
           Y A+Y F +R+  ELS   G ++ V  K + +  P W   E RG+ G+ P +Y+  
Sbjct: 2   YYALYTFEARSPGELSVTEGQVVTVLEKHDLKGNPEWWLVEDRGKQGYVPSNYLAK 57

DNMBP or Tuba is a cdc42-specific guanine nucleotide exchange factor (GEF) that contains four N-terminal SH3 domains, a central RhoGEF [or Dbl homology (DH)] domain followed by a Bin/Amphiphysin/Rvs (BAR) domain, and two C-terminal SH3 domains. It provides a functional link between dynamin, Rho GTPase signaling, and actin dynamics. It plays an important role in regulating cell junction configuration. The C-terminal SH3 domains of DNMBP bind to N-WASP and Ena/VASP proteins, which are key regulatory proteins of the actin cytoskeleton. Also included in this subfamily is the second C-terminal SH3 domain of Rho guanine nucleotide exchange factor 37 (ARHGEF37), whose function is still unknown. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 57

>gnl|CDD|212697 cd11763, SH3_SNX9_like, Src Homology 3 domain of Sorting Nexin 9 and similar proteins

 Score = 35.4 bits (82), Expect = 0.002
 Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%)

Query: 290 QNAEPGWLAGE-LRGQTGWFPESYVEP 315
           Q+   GWL G   RG+ G FP SYVE 
Sbjct: 29  QDVGDGWLEGRNSRGEVGLFPSSYVEI 55

Sorting nexins (SNXs) are Phox homology (PX) domain containing proteins that are involved in regulating membrane traffic and protein sorting in the endosomal system. SNXs differ from each other in their lipid-binding specificity, subcellular localization and specific function in the endocytic pathway. This subfamily consists of SH3 domain containing SNXs including SNX9, SNX18, SNX33, and similar proteins. SNX9 is localized to plasma membrane endocytic sites and acts primarily in clathrin-mediated endocytosis, while SNX18 is localized to peripheral endosomal structures, and acts in a trafficking pathway that is clathrin-independent but relies on AP-1 and PACS1. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212911 cd11978, SH3_VAV3_2, C-terminal (or second) Src homology 3 domain of VAV3 protein

 Score = 35.8 bits (82), Expect = 0.002
 Identities = 12/20 (60%), Positives = 15/20 (75%)

Query: 295 GWLAGELRGQTGWFPESYVE 314
           GW  GE+ G+ GWFP +YVE
Sbjct: 35  GWWRGEVNGRVGWFPSTYVE 54

VAV3 is ubiquitously expressed and functions as a phosphorylation-dependent guanine nucleotide exchange factor (GEF) for RhoA, RhoG, and Rac1. It has been implicated to function in the hematopoietic, bone, cerebellar, and cardiovascular systems. VAV3 is essential in axon guidance in neurons that control blood pressure and respiration. It is overexpressed in prostate cancer cells and it plays a role in regulating androgen receptor transcriptional activity. VAV proteins contain several domains that enable their function: N-terminal calponin homology (CH), acidic, RhoGEF (also called Dbl-homologous or DH), Pleckstrin Homology (PH), C1 (zinc finger), SH2, and two SH3 domains. The SH3 domain of VAV is involved in the localization of proteins to specific sites within the cell, by interacting with proline-rich sequences within target proteins. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 56

>gnl|CDD|212773 cd11839, SH3_Intersectin_4, Fourth Src homology 3 domain (or SH3D) of Intersectin

 Score = 35.8 bits (83), Expect = 0.002
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 5/37 (13%)

Query: 283 GTVVPVKQNAEPGWLAGELRG-----QTGWFPESYVE 314
           G +V V++ +  GW  GEL+      Q GWFP +YV+
Sbjct: 21  GQLVLVRKKSPSGWWEGELQARGKKRQIGWFPANYVK 57

Intersectins (ITSNs) are adaptor proteins that function in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. They are essential for initiating clathrin-coated pit formation. They bind to many proteins through their multidomain structure and facilitate the assembly of multimeric complexes. Vertebrates contain two ITSN proteins, ITSN1 and ITSN2, which exist in alternatively spliced short and long isoforms. The short isoforms contain two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoforms, in addition, contain RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. ITSN1 and ITSN2 are both widely expressed, with variations depending on tissue type and stage of development. The fourth SH3 domain (or SH3D) of ITSN1 has been shown to bind SHIP2, Numb, CdGAP, and N-WASP. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 58

>gnl|CDD|212954 cd12021, SH3_p47phox_1, First or N-terminal Src homology 3 domain of the p47phox subunit of NADPH oxidase, also called Neutrophil Cytosolic Factor 1

 Score = 35.7 bits (82), Expect = 0.002
 Identities = 15/33 (45%), Positives = 21/33 (63%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEP 315
           G VV V + +E GW   +L+ + GW P SY+EP
Sbjct: 21  GDVVEVVEKSENGWWFCQLKAKRGWVPASYLEP 53

p47phox, or NCF1, is a cytosolic subunit of the phagocytic NADPH oxidase complex (also called Nox2 or gp91phox), which plays a key role in the ability of phagocytes to defend against bacterial infections. NADPH oxidase catalyzes the transfer of electrons from NADPH to oxygen during phagocytosis forming superoxide and reactive oxygen species. p47phox is required for activation of NADH oxidase and plays a role in translocation. It contains an N-terminal Phox homology (PX) domain, tandem SH3 domains (N-SH3 and C-SH3), a polybasic/autoinhibitory region, and a C-terminal proline-rich region (PRR). This model characterizes the first SH3 domain (or N-SH3) of p47phox. In its inactive state, the tandem SH3 domains interact intramolecularly with the autoinhibitory region; upon activation, the tandem SH3 domains are exposed through a conformational change, resulting in their binding to the PRR of p22phox and the activation of NADPH oxidase. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212918 cd11985, SH3_Stac2_C, C-terminal Src homology 3 domain of SH3 and cysteine-rich domain-containing protein 2 (Stac2)

 Score = 35.7 bits (82), Expect = 0.002
 Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 1/45 (2%)

Query: 120 YIAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTIGDRTARF 163
           Y+A Y +   E  DL     + + V    N DWW G  GDR   F
Sbjct: 2   YVALYKFLPQENNDLPLQPGDRVMVVDDSNEDWWKGKSGDRVGFF 46

Stac proteins are putative adaptor proteins that contain a cysteine-rich C1 domain and one or two SH3 domains at the C-terminus. There are three mammalian members (Stac1, Stac2, and Stac3) of this family. Stac2 contains a single SH3 domain at the C-terminus unlike Stac1 and Stac3, which contain two C-terminal SH3 domains. Stac1 and Stac2 have been found to be expressed differently in mature dorsal root ganglia (DRG) neurons. Stac1 is mainly expressed in peptidergic neurons while Stac2 is found in a subset of nonpeptidergic and all trkB+ neurons. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212861 cd11928, SH3_SH3RF3_1, First Src Homology 3 domain of SH3 domain containing ring finger 3, an E3 ubiquitin-protein ligase

 Score = 35.7 bits (82), Expect = 0.002
 Identities = 13/31 (41%), Positives = 21/31 (67%)

Query: 122 AAYPYDSTEPGDLTFNQDEVIYVTKKENDWW 152
           A Y Y+  EPGDL FN+ ++I + +K ++ W
Sbjct: 5   ALYSYEGKEPGDLKFNKGDIIILRRKVDENW 35

SH3RF3 is also called POSH2 (Plenty of SH3s 2) or SH3MD4 (SH3 multiple domains protein 4). It is a scaffold protein with E3 ubiquitin-protein ligase activity. It was identified in the screen for interacting partners of p21-activated kinase 2 (PAK2). It may play a role in regulating JNK mediated apoptosis in certain conditions. It also interacts with GTP-loaded Rac1. SH3RF3 is highly homologous to SH3RF1; it also contains an N-terminal RING finger domain and four SH3 domains. This model represents the first SH3 domain, located at the N-terminal half, of SH3RF3. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212820 cd11887, SH3_Bbc1, Src Homology 3 domain of Bbc1 and similar domains

 Score = 36.2 bits (84), Expect = 0.002
 Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 7/60 (11%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRG-----QTGWFPESYVEP 225
           + +A+Y + S + D+L+F  G +I V  +++A+  W  GE        + G FP+++VE 
Sbjct: 3   KVKALYPYESDHEDDLNFDVGQLITVTEEEDAD--WYFGEYVDSNGNTKEGIFPKNFVEV 60

This subfamily is composed of Saccharomyces cerevisiae Bbc1p, also called Mti1p (Myosin tail region-interacting protein), and similar proteins. Bbc1p interacts with and regulates type I myosins in yeast, Myo3p and Myo5p, which are involved in actin cytoskeletal reorganization. It also binds and inhibits Las17, a WASp family protein that functions as an activator of the Arp2/3 complex. Bbc1p contains an N-terminal SH3 domain. SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies. Length = 60

>gnl|CDD|212834 cd11901, SH3_Nck1_2, Second Src Homology 3 domain of Nck1 adaptor protein

 Score = 35.8 bits (82), Expect = 0.002
 Identities = 15/31 (48%), Positives = 17/31 (54%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYV 313
           GT V V +    GW  G   GQ GWFP +YV
Sbjct: 23  GTKVIVMEKCSDGWWRGSYNGQVGWFPSNYV 53

Nck1 (also called Nckalpha) plays a crucial role in connecting signaling pathways of tyrosine kinase receptors and important effectors in actin dynamics and cytoskeletal remodeling. It binds and activates RasGAP, resulting in the downregulation of Ras. It is also involved in the signaling of endothilin-mediated inhibition of cell migration. Nck adaptor proteins regulate actin cytoskeleton dynamics by linking proline-rich effector molecules to protein tyrosine kinases and phosphorylated signaling intermediates. They contain three SH3 domains and a C-terminal SH2 domain. They function downstream of the PDGFbeta receptor and are involved in Rho GTPase signaling and actin dynamics. Vertebrates contain two Nck adaptor proteins: Nck1 (also called Nckalpha) and Nck2, which show partly overlapping functions but also bind distinct targets. The second SH3 domain of Nck appears to prefer ligands containing the APxxPxR motif. SH3 domains are protein interaction domains that usually bind to proline-rich ligands with moderate affinity and selectivity, preferentially a PxxP motif. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212950 cd12017, SH3_Tks_3, Third Src homology 3 domain of Tyrosine kinase substrate (Tks) proteins

 Score = 35.9 bits (83), Expect = 0.002
 Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 2/53 (3%)

Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           Y  I EF +   D +SFQ G  + V  K  +  GW   ++ G+ GW P SY+E
Sbjct: 2   YFTIGEFQATIQDGISFQKGQKVEVIDKNPS--GWWYVKIDGKEGWAPSSYIE 52

Tks proteins are Src substrates and scaffolding proteins that play important roles in the formation of podosomes and invadopodia, the dynamic actin-rich structures that are related to cell migration and cancer cell invasion. Vertebrates contain two Tks proteins, Tks4 (Tyr kinase substrate with four SH3 domains) and Tks5 (Tyr kinase substrate with five SH3 domains), which display partially overlapping but non-redundant functions. Both associate with the ADAMs family of transmembrane metalloproteases, which function as sheddases and mediators of cell and matrix interactions. Tks5 interacts with N-WASP and Nck, while Tks4 is essential for the localization of MT1-MMP (membrane-type 1 matrix metalloproteinase) to invadopodia. Tks proteins contain an N-terminal Phox homology (PX) domain and four or five SH3 domains. This model characterizes the third SH3 domain of Tks proteins. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212898 cd11965, SH3_ASAP1, Src homology 3 domain of ArfGAP with SH3 domain, ankyrin repeat and PH domain containing protein 1

 Score = 36.1 bits (83), Expect = 0.002
 Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 5/56 (8%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQ---TGWFPESYV 223
           R + IY+  + N DEL+F  G++I+V  +++ E  W  G + GQ    G FP S+V
Sbjct: 1   RVKTIYDCQADNDDELTFVEGEVIIVTGEEDQE--WWIGHIEGQPERKGVFPVSFV 54

ASAP1 is also called DDEF1 (Development and Differentiation Enhancing Factor 1), AMAP1, centaurin beta-4, or PAG2. an Arf GTPase activating protein (GAP) with activity towards Arf1 and Arf5 but not Arf6. However, it has been shown to bind GTP-Arf6 stably without GAP activity. It has been implicated in cell growth, migration, and survival, as well as in tumor invasion and malignancy. It binds paxillin and cortactin, two components of invadopodia which are essential for tumor invasiveness. It also binds focal adhesion kinase (FAK) and the SH2/SH3 adaptor CrkL. ASAP1 contains an N-terminal BAR domain, followed by a Pleckstrin homology (PH) domain, an Arf GAP domain, ankyrin (ANK) repeats, and a C-terminal SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 57

>gnl|CDD|212721 cd11787, SH3_SH3RF_2, Second Src Homology 3 domain of SH3 domain containing ring finger proteins

 Score = 35.8 bits (83), Expect = 0.002
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 9/55 (16%)

Query: 173 RAIYEFVSRNGDE---LSFQPGDIIMV--PVKQNAEPGWLAGELRGQTGWFPESY 222
           +A+Y+F  ++ DE   L+F+ GD+I V   V +N    W  G L  + G FP S+
Sbjct: 3   KALYDFEMKDEDEKDCLTFKKGDVITVIRRVDEN----WAEGRLGDKIGIFPISF 53

This model represents the second SH3 domain of SH3RF1 (or POSH), SH3RF2 (or POSHER), SH3RF3 (POSH2), and similar domains. Members of this family are scaffold proteins that function as E3 ubiquitin-protein ligases. They all contain an N-terminal RING finger domain and multiple SH3 domains; SH3RF1 and SH3RF3 have four SH3 domains while SH3RF2 has three. SH3RF1 plays a role in calcium homeostasis through the control of the ubiquitin domain protein Herp. It may also have a role in regulating death receptor mediated and JNK mediated apoptosis. SH3RF3 interacts with p21-activated kinase 2 (PAK2) and GTP-loaded Rac1. It may play a role in regulating JNK mediated apoptosis in certain conditions. SH3RF2 acts as an anti-apoptotic regulator of the JNK pathway by binding to and promoting the degradation of SH3RF1. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212878 cd11945, SH3_Endophilin_B1, Src homology 3 domain of Endophilin-B1

 Score = 35.8 bits (82), Expect = 0.002
 Identities = 19/58 (32%), Positives = 29/58 (50%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           S  R+ R +Y++ + N  ELS    ++I V      +  WL GE   Q G  P +Y+E
Sbjct: 1   SGSRKARVLYDYDAANSTELSLLADEVITVYSVPGMDSDWLMGERGNQKGKVPITYLE 58

Endophilin-B1, also called Bax-interacting factor 1 (Bif-1) or SH3GLB1 (SH3-domain GRB2-like endophilin B1), is localized mainly to the Golgi apparatus. It is involved in the regulation of many biological events including autophagy, tumorigenesis, nerve growth factor (NGF) trafficking, neurite outgrowth, mitochondrial outer membrane dynamics, and cell death. Endophilins play roles in synaptic vesicle formation, virus budding, mitochondrial morphology maintenance, receptor-mediated endocytosis inhibition, and endosomal sorting. They contain an N-terminal N-BAR domain (BAR domain with an additional N-terminal amphipathic helix), followed by a variable region containing proline clusters, and a C-terminal SH3 domain. Endophilin-B1 forms homo- and heterodimers (with endophilin-B2) through its BAR domain. It interacts with amphiphysin 1 and dynamin 1 through its SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 61

>gnl|CDD|212858 cd11925, SH3_SH3RF3_3, Third Src Homology 3 domain of SH3 domain containing ring finger 3, an E3 ubiquitin-protein ligase

 Score = 35.4 bits (81), Expect = 0.002
 Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 4/56 (7%)

Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAG-ELR-GQTGWFPESYVEP 225
           Y A+Y +  +  DEL  + G+  M  V +  + GW  G  LR G +G FP +YV P
Sbjct: 3   YLALYAYKPQKNDELELRKGE--MYRVIEKCQDGWFKGTSLRTGVSGVFPGNYVTP 56

SH3RF3 is also called POSH2 (Plenty of SH3s 2) or SH3MD4 (SH3 multiple domains protein 4). It is a scaffold protein with E3 ubiquitin-protein ligase activity. It was identified in the screen for interacting partners of p21-activated kinase 2 (PAK2). It may play a role in regulating JNK mediated apoptosis in certain conditions. It also interacts with GTP-loaded Rac1. SH3RF3 is highly homologous to SH3RF1; it also contains an N-terminal RING finger domain and four SH3 domains. This model represents the third SH3 domain, located in the middle, of SH3RF3. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 57

>gnl|CDD|212808 cd11875, SH3_CD2AP-like_3, Third Src Homology 3 domain (SH3C) of CD2-associated protein and similar proteins

 Score = 35.0 bits (81), Expect = 0.003
 Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 2/35 (5%)

Query: 283 GTVVPV--KQNAEPGWLAGELRGQTGWFPESYVEP 315
           G +V +  K   + GW  GEL G+ G FP+++VEP
Sbjct: 21  GDIVTILSKDCEDKGWWKGELNGKRGVFPDNFVEP 55

This subfamily is composed of the third SH3 domain (SH3C) of CD2AP, CIN85 (Cbl-interacting protein of 85 kDa), and similar domains. CD2AP and CIN85 are adaptor proteins that bind to protein partners and assemble complexes that have been implicated in T cell activation, kidney function, and apoptosis of neuronal cells. They also associate with endocytic proteins, actin cytoskeleton components, and other adaptor proteins involved in receptor tyrosine kinase (RTK) signaling. CD2AP and the main isoform of CIN85 contain three SH3 domains, a proline-rich region, and a C-terminal coiled-coil domain. All of these domains enable CD2AP and CIN85 to bind various protein partners and assemble complexes that have been implicated in many different functions. SH3C of both proteins have been shown to bind to ubiquitin. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212737 cd11803, SH3_Endophilin_A, Src homology 3 domain of Endophilin-A

 Score = 34.9 bits (81), Expect = 0.003
 Identities = 10/19 (52%), Positives = 14/19 (73%)

Query: 296 WLAGELRGQTGWFPESYVE 314
           W  G + GQ+G+FP +YVE
Sbjct: 35  WYEGMVNGQSGFFPVNYVE 53

Endophilins play roles in synaptic vesicle formation, virus budding, mitochondrial morphology maintenance, receptor-mediated endocytosis inhibition, and endosomal sorting. They are classified into two types, A and B. Vertebrates contain three endophilin-A isoforms (A1, A2, and A3). Endophilin-A proteins are enriched in the brain and play multiple roles in receptor-mediated endocytosis. They tubulate membranes and regulate calcium influx into neurons to trigger the activation of the endocytic machinery. They are also involved in the sorting of plasma membrane proteins, actin filament assembly, and the uncoating of clathrin-coated vesicles for fusion with endosomes. Endophilins contain an N-terminal N-BAR domain (BAR domain with an additional N-terminal amphipathic helix), followed by a variable region containing proline clusters, and a C-terminal SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212884 cd11951, SH3_GRAP_C, C-terminal Src homology 3 domain of GRB2-related adaptor protein

 Score = 35.2 bits (81), Expect = 0.003
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEP 315
           G ++ V    +P W  G + G+ G+FP +YV P
Sbjct: 21  GDIIEVLDCPDPNWWRGRISGRVGFFPRNYVHP 53

GRAP is a GRB-2 like adaptor protein that is highly expressed in lymphoid tissues. It acts as a negative regulator of T cell receptor (TCR)-induced lymphocyte proliferation by downregulating the signaling to the Ras/ERK pathway. It has been identified as a regulator of TGFbeta signaling in diabetic kidney tubules and may have a role in the pathogenesis of the disease. GRAP contains an N-terminal SH3 domain, a central SH2 domain, and a C-terminal SH3 domain. The C-terminal SH3 domains (SH3c) of the related proteins, GRB2 and GRAP2, have been shown to bind to classical PxxP motif ligands, as well as to non-classical motifs. GRB2 SH3c binds Gab2 (Grb2-associated binder 2) through epitopes containing RxxK motifs, while the SH3c of GRAP2 binds to the phosphatase-like protein HD-PTP via a RxxxxK motif. SH3 domains are protein interaction domains that typically bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212998 cd12065, SH3_GRAF2, Src Homology 3 domain of GTPase Regulator Associated with Focal adhesion kinase 2

 Score = 35.3 bits (81), Expect = 0.003
 Identities = 15/27 (55%), Positives = 18/27 (66%)

Query: 288 VKQNAEPGWLAGELRGQTGWFPESYVE 314
           V  + EPGWL G L G+ G  PE+YVE
Sbjct: 27  VTLSREPGWLEGTLNGKRGLIPENYVE 53

GRAF2, also called Rho GTPase activating protein 10 (ARHGAP10) or PS-GAP, is a GAP with activity towards Cdc42 and RhoA. It regulates caspase-activated p21-activated protein kinase-2 (PAK-2p34). GRAF2 interacts with PAK-2p34, leading to its stabilization and decrease of cell death. It is highly expressed in skeletal muscle, and is involved in alpha-catenin recruitment at cell-cell junctions. GRAF2 contains an N-terminal BAR domain, followed by a Pleckstrin homology (PH) domain, a Rho GAP domain, and a C-terminal SH3 domain. The SH3 domain of GRAF binds PKNbeta, a target of the small GTPase Rho. SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies. Length = 54

>gnl|CDD|212755 cd11821, SH3_ASAP, Src homology 3 domain of ArfGAP with SH3 domain, ankyrin repeat and PH domain containing proteins

 Score = 35.0 bits (81), Expect = 0.003
 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)

Query: 122 AAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTI 156
           A Y   +    +LTF++ E+I VT +E+ +WW G I
Sbjct: 4   ALYDCQADNDDELTFSEGEIIVVTGEEDDEWWEGHI 39

ASAPs are Arf GTPase activating proteins (GAPs) and they function in regulating cell growth, migration, and invasion. They contain an N-terminal BAR domain, followed by a Pleckstrin homology (PH) domain, an Arf GAP domain, ankyrin (ANK) repeats, and a C-terminal SH3 domain. Vertebrates contain at least three members, ASAP1, ASAP2, and ASAP3, but some ASAP3 proteins do not seem to harbor a C-terminal SH3 domain. ASAP1 and ASAP2 show GTPase activating protein (GAP) activity towards Arf1 and Arf5. They do not show GAP activity towards Arf6, but are able to mediate Arf6 signaling by binding stably to GTP-Arf6. ASAP3 is an Arf6-specific GAP. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212710 cd11776, SH3_PI3K_p85, Src Homology 3 domain of the p85 regulatory subunit of Class IA Phosphatidylinositol 3-kinases

 Score = 35.9 bits (83), Expect = 0.003
 Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 15/69 (21%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMV----------PVKQNAEP---GWLAG--ELRGQT 215
           +YRA+Y++     +++  + GD+++V          P  +   P   GWL G  E  G+ 
Sbjct: 2   QYRALYDYEKERDEDIILKTGDVLVVENPELLALGVPDGKETVPKPEGWLEGKNERTGER 61

Query: 216 GWFPESYVE 224
           G FP +YVE
Sbjct: 62  GDFPGTYVE 70

Class I PI3Ks convert PtdIns(4,5)P2 to the critical second messenger PtdIns(3,4,5)P3. They are heterodimers and exist in multiple isoforms consisting of one catalytic subunit (out of four isoforms) and one of several regulatory subunits. Class IA PI3Ks associate with the p85 regulatory subunit family, which contains SH3, RhoGAP, and SH2 domains. The p85 subunits recruit the PI3K p110 catalytic subunit to the membrane, where p110 phosphorylates inositol lipids. Vertebrates harbor two p85 isoforms, called alpha and beta. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 72

>gnl|CDD|213010 cd12077, SH3_Tks5_2, Second Src homology 3 domain of Tyrosine kinase substrate with five SH3 domains

 Score = 35.4 bits (81), Expect = 0.003
 Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 2/54 (3%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           +Y  +  + S+  DE+ F+ G  + V +++N E GW      G+ GW P SY++
Sbjct: 2   KYVTVQPYTSQGKDEIGFEKGVTVEV-IQKNLE-GWWYIRYLGKEGWAPASYLK 53

Tks5, also called SH3 and PX domain-containing protein 2A (SH3PXD2A) or Five SH (FISH), is a scaffolding protein and Src substrate that is localized in podosomes, which are electron-dense structures found in Src-transformed fibroblasts, osteoclasts, macrophages, and some invasive cancer cells. It binds and regulates some members of the ADAMs family of transmembrane metalloproteases, which function as sheddases and mediators of cell and matrix interactions. It is required for podosome formation, degradation of the extracellular matrix, and cancer cell invasion. Tks5 contains an N-terminal Phox homology (PX) domain and five SH3 domains. This model characterizes the second SH3 domain of Tks5. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212695 cd11761, SH3_FCHSD_1, First Src Homology 3 domain of FCH and double SH3 domains proteins

 Score = 35.0 bits (81), Expect = 0.003
 Identities = 13/52 (25%), Positives = 28/52 (53%), Gaps = 2/52 (3%)

Query: 174 AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAG-ELRGQTGWFPESYVE 224
            +Y + ++  DEL+   G+ + V ++     GW+      G+ G+ PE+Y++
Sbjct: 6   VLYSYEAQRPDELTITEGEELEV-IEDGDGDGWVKARNKSGEVGYVPENYLQ 56

This group is composed of FCH and double SH3 domains protein 1 (FCHSD1) and FCHSD2. These proteins have a common domain structure consisting of an N-terminal F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs), two SH3, and C-terminal proline-rich domains. They have only been characterized in silico and their functions remain unknown. This group also includes the insect protein, nervous wreck, which acts as a regulator of synaptic growth signaling. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 57

>gnl|CDD|212935 cd12002, SH3_NEDD9, Src homology 3 domain of CAS (Crk-Associated Substrate) scaffolding protein family member, Neural precursor cell Expressed, Developmentally Down-regulated 9

 Score = 35.3 bits (81), Expect = 0.003
 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 3/49 (6%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAE--PGWLAGELRGQTGWFP 219
           RA+Y+ V    +EL+F+ GDI+ V ++QN     GW    L G+ G  P
Sbjct: 3   RALYDNVPECAEELAFRKGDILTV-IEQNTGGLEGWWLCSLHGRQGIAP 50

NEDD9 is also called human enhancer of filamentation 1 (HEF1) or CAS-L (Crk-associated substrate in lymphocyte). It was first described as a gene predominantly expressed in early embryonic brain, and was also isolated from a screen of human proteins that regulate filamentous budding in yeast, and as a tyrosine phosphorylated protein in lymphocytes. It promotes metastasis in different solid tumors. NEDD9 localizes in focal adhesions and associates with FAK and Abl kinase. It also interacts with SMAD3 and the proteasomal machinery which allows its rapid turnover; these interactions are not shared by other CAS proteins. CAS proteins function as molecular scaffolds to regulate protein complexes that are involved in many cellular processes. They share a common domain structure that includes an N-terminal SH3 domain, an unstructured substrate domain that contains many YxxP motifs, a serine-rich four-helix bundle, and a FAT-like C-terminal domain. The SH3 domain of CAS proteins binds to diverse partners including FAK, FRNK, Pyk2, PTP-PEST, DOCK180, among others. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 57

>gnl|CDD|212718 cd11784, SH3_SH3RF2_3, Third Src Homology 3 domain of SH3 domain containing ring finger 2

 Score = 35.1 bits (81), Expect = 0.003
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 4/57 (7%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE--LRGQTGWFPESYVEP 225
              A++ + +   +EL  Q G+   V V    + GWL G   + G+ G FP +YV P
Sbjct: 1   MCVALHSYSAHRPEELELQKGE--GVRVLGKFQEGWLRGLSLVTGRVGIFPSNYVSP 55

SH3RF2 is also called POSHER (POSH-eliminating RING protein) or HEPP1 (heart protein phosphatase 1-binding protein). It acts as an anti-apoptotic regulator of the JNK pathway by binding to and promoting the degradation of SH3RF1 (or POSH), a scaffold protein that is required for pro-apoptotic JNK activation. It may also play a role in cardiac functions together with protein phosphatase 1. SH3RF2 contains an N-terminal RING finger domain and three SH3 domains. This model represents the third SH3 domain, located in the middle, of SH3RF2. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212766 cd11832, SH3_Shank, Src homology 3 domain of SH3 and multiple ankyrin repeat domains (Shank) proteins

 Score = 35.1 bits (81), Expect = 0.003
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFP 219
            + A+  +  +   E+S   GD   V V    E G+  G +RG+TGWFP
Sbjct: 1   YFIAVKSYSPQEEGEISLHKGDR--VKVLSIGEGGFWEGSVRGRTGWFP 47

Shank proteins carry scaffolding functions through multiple sites of protein-protein interaction in its domain architecture, including ankyrin (ANK) repeats, a long proline rich region, as well as SH3, PDZ, and SAM domains. They bind a variety of membrane and cytosolic proteins, and exist in alternatively spliced isoforms. They are highly enriched in postsynaptic density (PSD) where they interact with the cytoskeleton and with postsynaptic membrane receptors including NMDA and glutamate receptors. They are crucial in the construction and organization of the PSD and dendritic spines of excitatory synapses. There are three members of this family (Shank1, Shank2, Shank3) which show distinct and cell-type specific patterns of expression. Shank1 is brain-specific; Shank2 is found in neurons, glia, endocrine cells, liver, and kidney; Shank3 is widely expressed. The SH3 domain of Shank binds GRIP, a scaffold protein that binds AMPA receptors and Eph receptors/ligands. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 50

>gnl|CDD|212872 cd11939, SH3_ephexin1, Src homology 3 domain of the Rho guanine nucleotide exchange factor, ephexin-1 (also called NGEF or ARHGEF27)

 Score = 34.9 bits (80), Expect = 0.003
 Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 4/52 (7%)

Query: 175 IYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL--RGQTGWFPESYVE 224
           ++ +VS+  DELS +  D++ +  K   + GW+ GE     + GWFP S VE
Sbjct: 5   VHPYVSQEPDELSLELADVLNILDK--TDDGWIFGERLHDQERGWFPSSVVE 54

Ephexin-1, also called NGEF (neuronal GEF) or ARHGEF27, activates RhoA, Tac1, and Cdc42 by exchanging bound GDP for free GTP. It is expressed mainly in the brain in a region associated with movement control. It regulates the stability of postsynaptic acetylcholine receptor (AChR) clusters and thus, plays a critical role in the maturation and neurotransmission of neuromuscular junctions. Ephexin-1 directly interacts with the ephrin receptor EphA4 and their coexpression enhances the ability of ephexin-1 to activate RhoA. It is required for normal axon growth and EphA-induced growth cone collapse. Ephexin-1 contains RhoGEF (also called Dbl-homologous or DH), Pleckstrin Homology (PH), and SH3 domains. The SH3 domains of ARHGEFs play an autoinhibitory role through intramolecular interactions with a proline-rich region N-terminal to the DH domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212909 cd11976, SH3_VAV1_2, C-terminal (or second) Src homology 3 domain of VAV1 protein

 Score = 34.5 bits (79), Expect = 0.004
 Identities = 12/27 (44%), Positives = 18/27 (66%)

Query: 288 VKQNAEPGWLAGELRGQTGWFPESYVE 314
           + +  + GW  GE+ G+ GWFP +YVE
Sbjct: 27  LNKKGQQGWWRGEIYGRVGWFPANYVE 53

VAV1 is expressed predominantly in the hematopoietic system and it plays an important role in the development and activation of B and T cells. It is activated by tyrosine phosphorylation to function as a guanine nucleotide exchange factor (GEF) for Rho GTPases following cell surface receptor activation, triggering various effects such as cytoskeletal reorganization, transcription regulation, cell cycle progression, and calcium mobilization. It also serves as a scaffold protein and has been shown to interact with Ku70, Socs1, Janus kinase 2, SIAH2, S100B, Abl gene, ZAP-70, SLP76, and Syk, among others. VAV proteins contain several domains that enable their function: N-terminal calponin homology (CH), acidic, RhoGEF (also called Dbl-homologous or DH), Pleckstrin Homology (PH), C1 (zinc finger), SH2, and two SH3 domains. The C-terminal SH3 domain of Vav1 interacts with a wide variety of proteins including cytoskeletal regulators (zyxin), RNA-binding proteins (Sam68), transcriptional regulators, viral proteins, and dynamin 2. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212928 cd11995, SH3_Intersectin1_5, Fifth Src homology 3 domain (or SH3E) of Intersectin-1

 Score = 34.9 bits (80), Expect = 0.004
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 281 GLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVE 314
             G ++ V    +P W  GEL GQ G FP +YV+
Sbjct: 20  SKGQIINVLNKEDPDWWKGELNGQVGLFPSNYVK 53

Intersectin-1 (ITSN1) is an adaptor protein that functions in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. It plays a role in clathrin-coated pit (CCP) formation. It binds to many proteins through its multidomain structure and facilitate the assembly of multimeric complexes. ITSN1 localizes in membranous organelles, CCPs, the Golgi complex, and may be involved in the cell membrane trafficking system. It exists in alternatively spliced short and long isoforms. The short isoform contains two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoform, in addition, contains RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. The fifth SH3 domain (or SH3E) of ITSN1 has been shown to bind many protein partners including SGIP1, Sos1, dynamin1/2, CIN85, c-Cbl, SHIP2, N-WASP, and synaptojanin-1, among others. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212781 cd11847, SH3_Brk, Src homology 3 domain of Brk (Breast tumor kinase) Protein Tyrosine Kinase (PTK), also called PTK6

 Score = 34.8 bits (80), Expect = 0.004
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 7/57 (12%)

Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL-----RGQTGWFPESYV 223
           Y+A+++F +R  +ELSFQ GD   +  +      W A +L         G+ P +Y+
Sbjct: 2   YKALWDFKARGDEELSFQAGDQFRIAERS--GDWWTALKLDRAGGVVAQGFVPNNYL 56

Brk is a cytoplasmic (or non-receptor) PTK with limited homology to Src kinases. It has been found to be overexpressed in a majority of breast tumors. It plays roles in normal cell differentiation, proliferation, survival, migration, and cell cycle progression. Brk substrates include RNA-binding proteins (SLM-1/2, Sam68), transcription factors (STAT3/5), and signaling molecules (Akt, paxillin, IRS-4). Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). However, Brk lacks the N-terminal myristoylation site. The SH3 domain of Src kinases contributes to substrate recruitment by binding adaptor proteins/substrates, and regulation of kinase activity through an intramolecular interaction. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 58

>gnl|CDD|212937 cd12004, SH3_Lyn, Src homology 3 domain of Lyn Protein Tyrosine Kinase

 Score = 35.0 bits (80), Expect = 0.004
 Identities = 12/32 (37%), Positives = 19/32 (59%)

Query: 121 IAAYPYDSTEPGDLTFNQDEVIYVTKKENDWW 152
           +A YPYD     DL+F + E + V ++  +WW
Sbjct: 3   VALYPYDGIHEDDLSFKKGEKLKVIEEHGEWW 34

Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The SH3 domain of Src kinases contributes to substrate recruitment by binding adaptor proteins/substrates, and regulation of kinase activity through an intramolecular interaction. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 56

>gnl|CDD|212749 cd11815, SH3_Eve1_2, Second Src homology 3 domain of ADAM-binding protein Eve-1

 Score = 34.5 bits (79), Expect = 0.004
 Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 2/50 (4%)

Query: 175 IYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           +++F + + D+LS   G+I+ +  K + E  W  G+ +  TG FP ++V+
Sbjct: 5   LHDFPAEHSDDLSLNSGEIVYLLEKIDTE--WYRGKCKNTTGIFPANHVK 52

Eve-1, also called SH3 domain-containing protein 19 (SH3D19) or EEN-binding protein (EBP), exists in multiple alternatively spliced isoforms. The longest isoform contains five SH3 domain in the C-terminal region and seven proline-rich motifs in the N-terminal region. It is abundantly expressed in skeletal muscle and heart, and may be involved in regulating the activity of ADAMs (A disintegrin and metalloproteases). Eve-1 interacts with EEN, an endophilin involved in endocytosis and may be the target of the MLL-EEN fusion protein that is implicated in leukemogenesis. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 52

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	336
KOG1029|consensus	1118		100.0
KOG4348|consensus	627		99.96
KOG1029|consensus	1118		99.96
KOG4226|consensus	379		99.96
KOG4225|consensus	489		99.94
KOG4226|consensus	379		99.91
KOG4348|consensus	627		99.85
KOG4225|consensus	489		99.8
KOG3601|consensus	222		99.65
KOG4792|consensus	293		99.64
PF14604	49	SH3_9: Variant SH3 domain; PDB: 2CRE_A 2E5K_A 2CT3	99.47
KOG4792|consensus	293		99.46
KOG3632|consensus	1335		99.43
KOG2996|consensus	865		99.41
PF14604	49	SH3_9: Variant SH3 domain; PDB: 2CRE_A 2E5K_A 2CT3	99.33
PF07653	55	SH3_2: Variant SH3 domain; InterPro: IPR011511 SH3	99.33
KOG2996|consensus	865		99.26
KOG2070|consensus	661		99.17
KOG2070|consensus	661		99.13
KOG3601|consensus	222		99.1
KOG3632|consensus	1335		99.1
PF07653	55	SH3_2: Variant SH3 domain; InterPro: IPR011511 SH3	99.09
smart00326	58	SH3 Src homology 3 domains. Src homology 3 (SH3) d	99.06
KOG2199|consensus	462		99.06
PF00018	48	SH3_1: SH3 domain; InterPro: IPR001452 SH3 (src Ho	99.06
cd00174	54	SH3 Src homology 3 domains; SH3 domains bind to pr	99.01
PF00018	48	SH3_1: SH3 domain; InterPro: IPR001452 SH3 (src Ho	99.0
KOG1118|consensus	366		98.99
KOG2199|consensus	462		98.81
KOG1118|consensus	366		98.76
KOG2546|consensus	483		98.75
KOG0162|consensus	1106		98.73
smart00326	58	SH3 Src homology 3 domains. Src homology 3 (SH3) d	98.71
KOG2856|consensus	472		98.64
cd00174	54	SH3 Src homology 3 domains; SH3 domains bind to pr	98.59
KOG0162|consensus	1106		98.59
KOG1264|consensus	1267		98.45
KOG0515|consensus	752		98.43
KOG2546|consensus	483		98.33
KOG1702|consensus	264		98.19
KOG3655|consensus	484		98.15
KOG2856|consensus	472		98.12
KOG1843|consensus	473		98.11
KOG3655|consensus	484		98.03
KOG1264|consensus	1267		98.01
KOG3875|consensus	362		98.0
KOG3523|consensus	695		97.76
KOG2222|consensus	848		97.71
KOG0515|consensus	752		97.68
KOG4773|consensus	386		97.67
KOG3875|consensus	362		97.53
KOG3523|consensus	695		97.48
KOG4278|consensus	1157		97.48
KOG1843|consensus	473		97.45
KOG2528|consensus	490		97.4
KOG3725|consensus	375		97.39
KOG4773|consensus	386		97.34
KOG1702|consensus	264		97.17
KOG2222|consensus	848		97.11
KOG1451|consensus	812		97.01
KOG1451|consensus	812		96.9
KOG4429|consensus	421		96.85
KOG3557|consensus	721		96.77
KOG3775|consensus	482		96.56
KOG4575|consensus	874		96.54
KOG4278|consensus	1157		96.5
KOG4575|consensus	874		96.3
PF08239	55	SH3_3: Bacterial SH3 domain; InterPro: IPR013247 S	96.19
KOG3725|consensus	375		96.1
KOG0197|consensus	468		96.07
KOG3775|consensus	482		95.95
KOG3771|consensus	460		95.92
KOG3771|consensus	460		95.7
KOG4429|consensus	421		95.37
smart00287	63	SH3b Bacterial SH3 domain homologues.	95.28
KOG2528|consensus	490		95.17
KOG3557|consensus	721		94.99
COG3103	205	SH3 domain protein [Signal transduction mechanisms	94.61
KOG0609|consensus	542		94.58
KOG0609|consensus	542		94.55
KOG0197|consensus	468		94.54
KOG3565|consensus	640		93.64
PRK10884	206	SH3 domain-containing protein; Provisional	93.42
PF08239	55	SH3_3: Bacterial SH3 domain; InterPro: IPR013247 S	92.84
PF06347	55	SH3_4: Bacterial SH3 domain; InterPro: IPR010466 S	92.41
KOG0199|consensus	1039		92.3
KOG3565|consensus	640		91.91
KOG0199|consensus	1039		91.71
COG3103	205	SH3 domain protein [Signal transduction mechanisms	91.16
PF14603	89	hSH3: Helically-extended SH3 domain; PDB: 1RI9_A.	90.27
PF14603	89	hSH3: Helically-extended SH3 domain; PDB: 1RI9_A.	90.11
smart00287	63	SH3b Bacterial SH3 domain homologues.	89.71
PRK10884	206	SH3 domain-containing protein; Provisional	88.42
PRK13914	481	invasion associated secreted endopeptidase; Provis	88.25
PF06347	55	SH3_4: Bacterial SH3 domain; InterPro: IPR010466 S	87.6
KOG3705|consensus	580		86.76
KOG0040|consensus	2399		85.09
KOG3812|consensus	475		81.96
KOG3812|consensus	475		80.57

>KOG1029|consensus

Probab=100.00  E-value=1.9e-36  Score=298.65  Aligned_cols=247  Identities=27%  Similarity=0.508  Sum_probs=191.4

Q ss_pred             cceeeccCCceEEecccccccccccccCCCcccchhhhhcccc----cc---ccccccCc----Chh-hhHHHhccccCc
Q psy7077          50 HQRLKITKDHTIKAKEEGDLKDTQSSSDGSQDVFCSVHLQLST----KE---KDLEVNNS----NLD-DLKKTLANMMSD  117 (336)
Q Consensus        50 h~~lk~~k~~~i~~~ee~~~~~~~~t~~~~r~~~~~~~~qi~s----k~---~~l~~~~~----~l~-el~~~~~~~~~~  117 (336)
                      ...|+|.|+++|.+.|+++.||.. +..+.+++|.+.++++..    ..   ..+++...    ... +.-.+.+.....
T Consensus       827 e~dLsFskgd~I~VlekqemwW~G-~v~g~~GwFPksYVk~~~~~t~st~~~~s~es~sae~p~~~~~~a~~taa~v~~q  905 (1118)
T KOG1029|consen  827 ENDLSFSKGDTITVLEKQEMWWFG-EVAGEIGWFPKSYVKEVGAITGSTTKIESPESLSAEAPGAAASDATPTAAPVAPQ  905 (1118)
T ss_pred             cccccccCCCeeeeehhccceecc-cccCccCcCcHHhhhhccccccccccccCcccccccCccccccccCccccccccc
Confidence            678999999999999999999888 778889999999988321    11   11111110    000 010111222233


Q ss_pred             c-EEEEecccCCCCCCCccccCCCEEEEEeecCCceecccCCCcccccccc---------------------cceeeeee
Q psy7077         118 K-YYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGTIGDRTARFRGVS---------------------EYRRYRAI  175 (336)
Q Consensus       118 ~-~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~Ww~g~~~~~~g~~p~~~---------------------~~~~~~al  175 (336)
                      . +|..+++|++.+..||.|..||.|.|++++++||.|+++++.|.||++.                     ....+.++
T Consensus       906 eq~ya~~~~~e~vEq~dlt~~egd~iLvtekdgeww~gt~~~r~gifPan~y~r~~~q~gs~Tp~k~g~~~kkpeiAqVi  985 (1118)
T KOG1029|consen  906 EQLYAVYPYFEAVEQGDLTFHEGDEILVTEKDGEWWTGTCGDREGIFPANYYVRPKDQEGSGTPPKQGPTPKKPEIAQVI  985 (1118)
T ss_pred             ceeEEEecccccccCCCccccccceEEEeeccCceeccccCCccccccccceeeehhccCCCCCCCCCCCCCCchhhhhh
Confidence            3 6655556666999999999999999999999999999999999999761                     12347789


Q ss_pred             eecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe--eCc---eeeecccceeecCCCCCCCCCCCCCCCCcccccccc
Q psy7077         176 YEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL--RGQ---TGWFPESYVEPCDETGEVVPGTELPGDKHHLELIAE  250 (336)
Q Consensus       176 ~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~--~g~---~G~fP~~yve~~~~~~~~~~~~~~~~~~~~~~~~a~  250 (336)
                      -+|.+..++.|++.+|++|.+  ..+...|||.|++  +|+   .||||++||+.+.+......+    .....+..|+.
T Consensus       986 a~yvAs~peQLsla~GqlIlI--rkKn~sGWWeGELqarGkkrq~GWFPa~yVKvL~~~s~raTP----a~~~v~qviam 1059 (1118)
T KOG1029|consen  986 ADYVASGPEQLSLAPGQLILI--RKKNASGWWEGELQARGKKRQIGWFPAEYVKVLEPGSGRATP----ATRPVCQVIAM 1059 (1118)
T ss_pred             hhhhccCchhccccCccEEEE--EecCCCccchhhHhhcCCccccccccHHHhhhccCCCCcCCC----CCCccceeEEe
Confidence            999999999999999999988  4678999999986  454   599999999999865322222    22224677899


Q ss_pred             CCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCCC
Q psy7077         251 VPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETG  320 (336)
Q Consensus       251 ~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~~  320 (336)
                      |+|.+.+.++|+                 |.+||+|.|+.+++..||.|+.||++|+||+|||.....++
T Consensus      1060 YdY~AqndDELs-----------------F~kgdiI~VlnkdepeWW~Ge~ng~sGLFPSNYV~k~ttd~ 1112 (1118)
T KOG1029|consen 1060 YDYEAQNDDELS-----------------FKKGDIINVLNKDEPEWWSGERNGKSGLFPSNYVQKQTTDG 1112 (1118)
T ss_pred             eccccCCccccc-----------------ccCCCEEEecCCCChhhhcccccCccccCccccccccccCC
Confidence            999999988866                 99999999999999999999999999999999997665443

>KOG4348|consensus

Probab=99.96  E-value=1.8e-30  Score=243.25  Aligned_cols=196  Identities=27%  Similarity=0.494  Sum_probs=142.0

Q ss_pred             EEEecccCCCCCCCccccCCCEEEEEee-cCCceecccCCCccccccc--------------------------------
Q psy7077         120 YIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTARFRGV--------------------------------  166 (336)
Q Consensus       120 ~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~Ww~g~~~~~~g~~p~~--------------------------------  166 (336)
                      |++-|||++..+|||+++.|++|.-+.+ +.+||.|+.+|+.|.||.+                                
T Consensus         4 ~ive~dy~a~hddelti~vgeii~nvkk~e~gw~egelngrrg~fpdnfV~eik~e~k~d~l~nk~~r~~l~q~~s~n~l   83 (627)
T KOG4348|consen    4 YIVEYDYDAVHDDELTIRVGEIIRNVKKLEEGWLEGELNGRRGQFPDNFVVEIKVEFKDDDLVNKLSRDSLVQMTSRNPL   83 (627)
T ss_pred             eeeecccccccCceeeEeHHHHHHhhhhhccceeeceeccccccCCchhhhhhhhhcccccccccccccchhhcccCCCc
Confidence            7889999999999999999999998888 9999999999999999753                                


Q ss_pred             --------------ccceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCCCCCC
Q psy7077         167 --------------SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEV  232 (336)
Q Consensus       167 --------------~~~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~~~~~  232 (336)
                                    ...+.|+++|.|.+++.|||.|+.||+|.+.  .+...|||.|.++|+.|+||+|||..+....+.
T Consensus        84 ~~~q~v~rtn~~~q~~~r~c~v~f~Y~pqndDELelkVGDiIeli--~eVEeGWw~G~Lngk~GmFPsNFVkel~~~sde  161 (627)
T KOG4348|consen   84 TVHQQVERTNPPPQPQARICVVTFAYSPQNDDELELKVGDIIELI--SEVEEGWWKGKLNGKVGMFPSNFVKELPTPSDE  161 (627)
T ss_pred             cccCcccccCCCCCccceeEEEEEeecCCCCceeeeeeccHHHhh--hHhhhhhhhceecCcccccchhhceecCCCCcc
Confidence                          1235699999999999999999999999994  568899999999999999999999988743321


Q ss_pred             CCCCC--------------C-C----------CCCccccccccCCC--------------C-cCCC----------CCCC
Q psy7077         233 VPGTE--------------L-P----------GDKHHLELIAEVPE--------------N-ISDS----------GGSG  262 (336)
Q Consensus       233 ~~~~~--------------~-~----------~~~~~~~~~a~~~~--------------~-~~~~----------~~l~  262 (336)
                      .....              + +          +.......+....+              + .+..          ..++
T Consensus       162 ~~~aqd~~~S~stlagst~~~ps~s~~SE~a~gsv~qPKkI~g~gfgdIfk~~pVklr~rt~~sete~~p~~~~i~~~l~  241 (627)
T KOG4348|consen  162 SAAAQDPAASASTLAGSTARTPSKSIGSEVAMGSVTQPKKIDGTGFGDIFKPAPVKLRLRTKFSETEKKPEKPFISSALS  241 (627)
T ss_pred             hhhhcCcccchhhhcCcCCCCCcccccchhhcccccCcccccCCCcccccCCccceecccccccccccccccchhhhccC
Confidence            10000              0 0          00000000000000              0 0000          0000


Q ss_pred             -----------------ccccCCCCCCCCC----CCCCCCCCCEEEEEeec--CCCeEEEEeCCceeEeeCCCeeecC
Q psy7077         263 -----------------IAVEEGPGIPADI----PSPIMGLGTVVPVKQNA--EPGWLAGELRGQTGWFPESYVEPCD  317 (336)
Q Consensus       263 -----------------~~~~~~~~~~~~~----~~Lsf~~Gd~V~V~~~~--~~~W~~g~~~G~~G~fPsnyV~~i~  317 (336)
                                       -....|++.+++.    ++|.|++||+|.++.++  |-|||+|++||+.|+||-|||+.+.
T Consensus       242 asT~s~d~tktd~~~~tKtKeycrv~F~Ye~qndDELt~KEgdil~lItK~cgdaGWweGELnGk~GvFPDNFv~lv~  319 (627)
T KOG4348|consen  242 ASTQSVDITKTDTAETTKTKEYCRVKFVYEPQNDDELTLKEGDILILITKNCGDAGWWEGELNGKKGVFPDNFVELVQ  319 (627)
T ss_pred             ccccCccccccccccchhhhhheeeeeeecCCCccceeeccccEEEEecccccccceeeeeecCccccCCchhhhhcC
Confidence                             0012233334443    35999999999988654  6699999999999999999999886

>KOG1029|consensus

Probab=99.96  E-value=2.1e-29  Score=248.96  Aligned_cols=270  Identities=23%  Similarity=0.409  Sum_probs=187.7

Q ss_pred             hhHHHHHHHhhccceeeccCCceEEecccc--cccccccccCCCcccchhhhhcc-ccc--------ccccccc------
Q psy7077          38 APLLLRILQNWAHQRLKITKDHTIKAKEEG--DLKDTQSSSDGSQDVFCSVHLQL-STK--------EKDLEVN------  100 (336)
Q Consensus        38 ~~~~~~~~~~~~h~~lk~~k~~~i~~~ee~--~~~~~~~t~~~~r~~~~~~~~qi-~sk--------~~~l~~~------  100 (336)
                      .|=|+--|+.+.|++++|..|+.|.+.+..  +--|.....++.-++|...+++. .+.        ...++..      
T Consensus       695 kyrAly~FeaRs~dEisf~pGDII~V~esq~aEPGWlaGel~gktGWFPenyvEki~~~e~p~~v~Pv~~l~~~~~psas  774 (1118)
T KOG1029|consen  695 KYRALYPFEARSHDEISFEPGDIIIVFESQAAEPGWLAGELRGKTGWFPENYVEKIPAVETPGGVPPVQNLPPTMTPSAS  774 (1118)
T ss_pred             EEeeecccccCCcccccccCCCEEEEehhccCCcccccceeccccCcCcHHHHhhcccCCCCCCCCchhcCCCCCCcccc
Confidence            455666678889999999999999998765  33478888888889996666553 211        1111111      


Q ss_pred             CcChh---hhHHH------hc------cc-cC--cc----EEEEecccCCCCCCCccccCCCEEEEEeecCCceecccCC
Q psy7077         101 NSNLD---DLKKT------LA------NM-MS--DK----YYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGTIGD  158 (336)
Q Consensus       101 ~~~l~---el~~~------~~------~~-~~--~~----~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~Ww~g~~~~  158 (336)
                      .++..   +-++.      +.      .+ +.  ..    +|+|+|.|.+..+++|+|.+||+|+|+++.+.||+|+..|
T Consensus       775 ~nq~a~~ad~~~~~~n~~~~t~~aA~p~~tapg~~eve~lq~iA~y~wrakke~dLsFskgd~I~VlekqemwW~G~v~g  854 (1118)
T KOG1029|consen  775 VNQIAVVADTKNESANAMGLTEGAAPPALTAPGQGEVEILQAIALYPWRAKKENDLSFSKGDTITVLEKQEMWWFGEVAG  854 (1118)
T ss_pred             cccceeecccccchhhccCCCCCCCCccccCCCchhhhhhhHHhhccccccccccccccCCCeeeeehhccceecccccC
Confidence            11111   00000      00      00 01  11    7999999999999999999999999999999999999999


Q ss_pred             Cccccccc----------------------------------------ccceeeeeeee-cccCCCCCCCCCCCCEEEEe
Q psy7077         159 RTARFRGV----------------------------------------SEYRRYRAIYE-FVSRNGDELSFQPGDIIMVP  197 (336)
Q Consensus       159 ~~g~~p~~----------------------------------------~~~~~~~al~d-f~a~~~~eLs~~~Gdii~v~  197 (336)
                      ..||||.+                                        .....+.++|. |.+....+|.|..||.|.|+
T Consensus       855 ~~GwFPksYVk~~~~~t~st~~~~s~es~sae~p~~~~~~a~~taa~v~~qeq~ya~~~~~e~vEq~dlt~~egd~iLvt  934 (1118)
T KOG1029|consen  855 EIGWFPKSYVKEVGAITGSTTKIESPESLSAEAPGAAASDATPTAAPVAPQEQLYAVYPYFEAVEQGDLTFHEGDEILVT  934 (1118)
T ss_pred             ccCcCcHHhhhhccccccccccccCcccccccCccccccccCcccccccccceeEEEecccccccCCCccccccceEEEe
Confidence            99999853                                        01123445555 45588899999999999996


Q ss_pred             eeecCCCCeEEEEeeCceeeeccc-ceeecCCCCCCCCCCCCCCCCccccccccCCCCcCCCCCCCccccCCCCCCCCCC
Q psy7077         198 VKQNAEPGWLAGELRGQTGWFPES-YVEPCDETGEVVPGTELPGDKHHLELIAEVPENISDSGGSGIAVEEGPGIPADIP  276 (336)
Q Consensus       198 ~~~~~~~gW~~g~~~g~~G~fP~~-yve~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~  276 (336)
                      +   .++.||.|+++++.|.||+| |+.+.+..+...++...+..+++..+..-.+|.++....                
T Consensus       935 e---kdgeww~gt~~~r~gifPan~y~r~~~q~gs~Tp~k~g~~~kkpeiAqVia~yvAs~peQ----------------  995 (1118)
T KOG1029|consen  935 E---KDGEWWTGTCGDREGIFPANYYVRPKDQEGSGTPPKQGPTPKKPEIAQVIADYVASGPEQ----------------  995 (1118)
T ss_pred             e---ccCceeccccCCccccccccceeeehhccCCCCCCCCCCCCCCchhhhhhhhhhccCchh----------------
Confidence            4   46789999999999999999 566665444444333222222222221122333333222                


Q ss_pred             CCCCCCCCEEEEEeecCCCeEEEEe--CCc---eeEeeCCCeeecCCCCCCCCCCC
Q psy7077         277 SPIMGLGTVVPVKQNAEPGWLAGEL--RGQ---TGWFPESYVEPCDETGEVVPGTE  327 (336)
Q Consensus       277 ~Lsf~~Gd~V~V~~~~~~~W~~g~~--~G~---~G~fPsnyV~~i~~~~~~~~~~~  327 (336)
                       |++..|++|.|.++.+.|||+|++  +|+   .||||++||+.+.+.+....|+.
T Consensus       996 -Lsla~GqlIlIrkKn~sGWWeGELqarGkkrq~GWFPa~yVKvL~~~s~raTPa~ 1050 (1118)
T KOG1029|consen  996 -LSLAPGQLILIRKKNASGWWEGELQARGKKRQIGWFPAEYVKVLEPGSGRATPAT 1050 (1118)
T ss_pred             -ccccCccEEEEEecCCCccchhhHhhcCCccccccccHHHhhhccCCCCcCCCCC
Confidence             669999999999999999999986  554   59999999999988755555544

>KOG4226|consensus

Probab=99.96  E-value=9.5e-29  Score=219.90  Aligned_cols=187  Identities=21%  Similarity=0.405  Sum_probs=142.8

Q ss_pred             ccEEEEecccCCCCCCCccccCCCEEEEEeecCCceecccC-CCccccccc-----------------------------
Q psy7077         117 DKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGTIG-DRTARFRGV-----------------------------  166 (336)
Q Consensus       117 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~Ww~g~~~-~~~g~~p~~-----------------------------  166 (336)
                      .|+.+|.|||.++++.||.+++++...+++.+..||+.++. .++|++|++                             
T Consensus         4 ~~~vvak~dy~aq~~qeldikkner~~llddsk~wwrvrns~n~tgyvpsnyverkn~~~~~si~knlkd~~g~kt~~k~   83 (379)
T KOG4226|consen    4 EVIVVAKWDYTAQQDQELDIKKNERLWLLDDSKTWWRVRNSANRTGYVPSNYVERKNSLKKGSIVKNLKDTLGLKTRRKT   83 (379)
T ss_pred             EEEEEEEechhcccchhccccccceEEEEcCCccceeeecccccCCcccchhhhcccchhhhHHHHhhhhccccccccCC
Confidence            45789999999999999999999999999999999999886 677888753                             


Q ss_pred             ---------------------ccceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceee
Q psy7077         167 ---------------------SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP  225 (336)
Q Consensus       167 ---------------------~~~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~  225 (336)
                                           .....+.+.|.|.++.++||++.+|+.|.|.  ++..+|||+|..+|+.||||+|||++
T Consensus        84 s~~~~~~sp~~d~~~ppd~~~~~~t~AvVKf~Y~a~~eDELsLtKGtrv~vm--EKssDGWWrG~~ng~VGWFPSNYv~E  161 (379)
T KOG4226|consen   84 SARDASPSPSTDAEYPPDRIYDLNTPAVVKFNYVAEREDELSLTKGTRVTVM--EKSSDGWWRGSYNGQVGWFPSNYVTE  161 (379)
T ss_pred             CccccCCCCCccccCCcchhhhcCCceEEEEeeccccccccccccCcEEEEE--EeccCcceecccCCeeccccccceeh
Confidence                                 0112377899999999999999999999995  56899999999999999999999988


Q ss_pred             cCCCCCCCCCCCCC-----------CCCccccccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEee---
Q psy7077         226 CDETGEVVPGTELP-----------GDKHHLELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQN---  291 (336)
Q Consensus       226 ~~~~~~~~~~~~~~-----------~~~~~~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~---  291 (336)
                      ..++.....++-.+           .....--.++.|++..++..+                 |+|++||++.|+++   
T Consensus       162 ~~ds~~gd~~s~~~~~~~A~a~n~~~s~vl~vVvaLYsFsssndeE-----------------LsFeKGerleivd~Pe~  224 (379)
T KOG4226|consen  162 EVDSAAGDSPSFLSLRKAASASNGQGSRVLHVVVALYSFSSSNDEE-----------------LSFEKGERLEIVDKPEN  224 (379)
T ss_pred             hccccccCCccceecchhhcccCCCCceEEEEEEEEecccCCChhh-----------------cccccCceeEeccCCCC
Confidence            66542221111000           000001123445555554444                 66999999999977   


Q ss_pred             cCCCeEEEEeCCceeEeeCCCeeecCCCCCC
Q psy7077         292 AEPGWLAGELRGQTGWFPESYVEPCDETGEV  322 (336)
Q Consensus       292 ~~~~W~~g~~~G~~G~fPsnyV~~i~~~~~~  322 (336)
                      +.|||.+...+|++|++|.|||+.+.+.+.+
T Consensus       225 DPdWwkarn~~G~vGLVPrNYv~vl~d~~~t  255 (379)
T KOG4226|consen  225 DPDWWKARNARGQVGLVPRNYVVVLSDGPST  255 (379)
T ss_pred             CchHHhhcccCCccceeecceEEEeccCccc
Confidence            3456666678999999999999998766533

>KOG4225|consensus

Probab=99.94  E-value=1.3e-26  Score=218.18  Aligned_cols=196  Identities=24%  Similarity=0.463  Sum_probs=140.4

Q ss_pred             EEEEecccCCCCCCCccccCCCEEEEEee-cCCceecccCCCcccccccc---------------------cceeeeeee
Q psy7077         119 YYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTARFRGVS---------------------EYRRYRAIY  176 (336)
Q Consensus       119 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~Ww~g~~~~~~g~~p~~~---------------------~~~~~~al~  176 (336)
                      .++|+|+|+++...||+|++||+|.|+.+ |.+|+.|+.+|+.|+||.+.                     ....++|.|
T Consensus       232 ~aralf~F~~qt~kEL~~~kGDIVyI~rkvD~nWyeGEhhGr~GifP~sYvE~~~~~e~~qP~~~~P~q~~~~g~a~A~y  311 (489)
T KOG4225|consen  232 AARALFDFEAQTPKELPFNKGDIVYILRKVDQNWYEGEHHGRVGIFPASYVEILTPREKAQPARPPPQQVLEQGEAIAKY  311 (489)
T ss_pred             hhhheeccccCCccccccCCCCEEEEEeeccCceeeeeecceecceechheeecCcccccCcCCCCcccccccccccccC
Confidence            68999999999999999999999999999 99999999999999998640                     123589999


Q ss_pred             ecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEee--CceeeecccceeecCCCCCCCC--CCCC------CCCC----
Q psy7077         177 EFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR--GQTGWFPESYVEPCDETGEVVP--GTEL------PGDK----  242 (336)
Q Consensus       177 df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~--g~~G~fP~~yve~~~~~~~~~~--~~~~------~~~~----  242 (336)
                      +|.+..+.||++++|+.|.++  ...+..|++|...  ++.|+||.+||+.+.......+  ....      +...    
T Consensus       312 ~F~~~s~~Els~~kge~v~L~--r~vd~nw~eG~i~g~~rqgifP~SyVev~~~~~~~~~~~~~~~p~~p~~s~~~~~~~  389 (489)
T KOG4225|consen  312 NFNADSPVELSLRKGERVTLT--RQVDENWYEGKIPGTNRQGIFPASYVEVIKSPKLELPLDYPDLPIPPRSSNELRPLS  389 (489)
T ss_pred             CCCCCCchhcccccCceEEEE--EeccCceeeccccccccccccchhHhhhhhccccccccccCCCCCCcccchhhcccc
Confidence            999999999999999999985  3588899999975  7899999999998764321110  0000      0000    


Q ss_pred             -----------c------cccccccCCCCcCC----CCCCCcc---ccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEE
Q psy7077         243 -----------H------HLELIAEVPENISD----SGGSGIA---VEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLA  298 (336)
Q Consensus       243 -----------~------~~~~~a~~~~~~~~----~~~l~~~---~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~  298 (336)
                                 .      .+...+.-+-....    ....+-+   .+-+++.+.+..+|.|.+||+|.|+++.||||+.
T Consensus       390 ~~s~~~~~~~~~t~~~~q~~~n~~qepr~~~~~~~~~qt~~~~l~yrAly~Y~pqnedeLEl~egDii~VmeKcddgWfv  469 (489)
T KOG4225|consen  390 EDSMKNAWPQTHTQSSTQPPENFPQEPRVTEKNDAHSQTSSEPLKYRALYSYRPQNEDELELREGDIIDVMEKCDDGWFV  469 (489)
T ss_pred             cchhhhcccccccccccCCCCCcccccccccccCcccCCCCCcccceeccccCCCCchhheeccCCEEeeeecccCccee
Confidence                       0      00000000000000    0000000   0011122233345999999999999999999999


Q ss_pred             E--EeCCceeEeeCCCeeec
Q psy7077         299 G--ELRGQTGWFPESYVEPC  316 (336)
Q Consensus       299 g--~~~G~~G~fPsnyV~~i  316 (336)
                      |  +..|+.|+||.|||+.+
T Consensus       470 Gts~rtg~fGtFPgnyV~~~  489 (489)
T KOG4225|consen  470 GTSRRTGKFGTFPGNYVKRL  489 (489)
T ss_pred             ccceecccccccCccccccC
Confidence            9  78999999999999853

>KOG4226|consensus

Probab=99.91  E-value=7.2e-25  Score=195.20  Aligned_cols=186  Identities=19%  Similarity=0.325  Sum_probs=143.1

Q ss_pred             HHhhccceeeccCCceEEecccccccccccccCCCcccchhhhhcccccc--ccccccCcC-----------hhhhHHHh
Q psy7077          45 LQNWAHQRLKITKDHTIKAKEEGDLKDTQSSSDGSQDVFCSVHLQLSTKE--KDLEVNNSN-----------LDDLKKTL  111 (336)
Q Consensus        45 ~~~~~h~~lk~~k~~~i~~~ee~~~~~~~~t~~~~r~~~~~~~~qi~sk~--~~l~~~~~~-----------l~el~~~~  111 (336)
                      |-.+..|+|.+.|++++-+.++++.||..++.....+-+.+..++.+..+  ..|-.+-..           ..+..++.
T Consensus        13 y~aq~~qeldikkner~~llddsk~wwrvrns~n~tgyvpsnyverkn~~~~~si~knlkd~~g~kt~~k~s~~~~~~sp   92 (379)
T KOG4226|consen   13 YTAQQDQELDIKKNERLWLLDDSKTWWRVRNSANRTGYVPSNYVERKNSLKKGSIVKNLKDTLGLKTRRKTSARDASPSP   92 (379)
T ss_pred             hhcccchhccccccceEEEEcCCccceeeecccccCCcccchhhhcccchhhhHHHHhhhhccccccccCCCccccCCCC
Confidence            34567899999999999999999999999888777777766666554211  111111000           00000000


Q ss_pred             c--------ccc-CccEEEEecccCCCCCCCccccCCCEEEEEee-cCCceecccCCCcccccccc--------------
Q psy7077         112 A--------NMM-SDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTARFRGVS--------------  167 (336)
Q Consensus       112 ~--------~~~-~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~Ww~g~~~~~~g~~p~~~--------------  167 (336)
                      +        .++ .+.-+++.|.|.++.+|||++.+|+.|.|+++ .++||+|..+|..||||++.              
T Consensus        93 ~~d~~~ppd~~~~~~t~AvVKf~Y~a~~eDELsLtKGtrv~vmEKssDGWWrG~~ng~VGWFPSNYv~E~~ds~~gd~~s  172 (379)
T KOG4226|consen   93 STDAEYPPDRIYDLNTPAVVKFNYVAEREDELSLTKGTRVTVMEKSSDGWWRGSYNGQVGWFPSNYVTEEVDSAAGDSPS  172 (379)
T ss_pred             CccccCCcchhhhcCCceEEEEeeccccccccccccCcEEEEEEeccCcceecccCCeeccccccceehhccccccCCcc
Confidence            0        011 11147889999999999999999999999999 99999999999999999751              


Q ss_pred             -----------------cceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe-eCceeeecccceeecCCC
Q psy7077         168 -----------------EYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL-RGQTGWFPESYVEPCDET  229 (336)
Q Consensus       168 -----------------~~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~-~g~~G~fP~~yve~~~~~  229 (336)
                                       ....++|||.|.+.+.+||+|++||.+.|+.....++.||.++. +|+.|+||.|||+.+.+.
T Consensus       173 ~~~~~~~A~a~n~~~s~vl~vVvaLYsFsssndeELsFeKGerleivd~Pe~DPdWwkarn~~G~vGLVPrNYv~vl~d~  252 (379)
T KOG4226|consen  173 FLSLRKAASASNGQGSRVLHVVVALYSFSSSNDEELSFEKGERLEIVDKPENDPDWWKARNARGQVGLVPRNYVVVLSDG  252 (379)
T ss_pred             ceecchhhcccCCCCceEEEEEEEEecccCCChhhcccccCceeEeccCCCCCchHHhhcccCCccceeecceEEEeccC
Confidence                             12347899999999999999999999999877778999999995 799999999999998865


Q ss_pred             C
Q psy7077         230 G  230 (336)
Q Consensus       230 ~  230 (336)
                      .
T Consensus       253 ~  253 (379)
T KOG4226|consen  253 P  253 (379)
T ss_pred             c
Confidence            4

>KOG4348|consensus

Probab=99.85  E-value=2.7e-22  Score=188.60  Aligned_cols=183  Identities=20%  Similarity=0.450  Sum_probs=137.3

Q ss_pred             HHhhccceeeccCCceEEecccccccccccccCCCcccc-hhhhhcccccccc--cccc--CcChhhh--H------HHh
Q psy7077          45 LQNWAHQRLKITKDHTIKAKEEGDLKDTQSSSDGSQDVF-CSVHLQLSTKEKD--LEVN--NSNLDDL--K------KTL  111 (336)
Q Consensus        45 ~~~~~h~~lk~~k~~~i~~~ee~~~~~~~~t~~~~r~~~-~~~~~qi~sk~~~--l~~~--~~~l~el--~------~~~  111 (336)
                      |...-.++|.++.|+.|.....-+.-|.+...++-+++| ++..+++...+++  +.+.  ...|-+.  +      ++.
T Consensus        10 y~a~hddelti~vgeii~nvkk~e~gw~egelngrrg~fpdnfV~eik~e~k~d~l~nk~~r~~l~q~~s~n~l~~~q~v   89 (627)
T KOG4348|consen   10 YDAVHDDELTIRVGEIIRNVKKLEEGWLEGELNGRRGQFPDNFVVEIKVEFKDDDLVNKLSRDSLVQMTSRNPLTVHQQV   89 (627)
T ss_pred             cccccCceeeEeHHHHHHhhhhhccceeeceeccccccCCchhhhhhhhhcccccccccccccchhhcccCCCccccCcc
Confidence            344456789999999988864444458888888888888 4444444443222  2111  0111110  0      000


Q ss_pred             -cccc----CccEEEEecccCCCCCCCccccCCCEEEEEee-cCCceecccCCCccccccc-------------------
Q psy7077         112 -ANMM----SDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTARFRGV-------------------  166 (336)
Q Consensus       112 -~~~~----~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~Ww~g~~~~~~g~~p~~-------------------  166 (336)
                       .+..    ....|+++|.|.++++|||+|..||+|.+++. ++|||.|..+|+.|.||++                   
T Consensus        90 ~rtn~~~q~~~r~c~v~f~Y~pqndDELelkVGDiIeli~eVEeGWw~G~Lngk~GmFPsNFVkel~~~sde~~~aqd~~  169 (627)
T KOG4348|consen   90 ERTNPPPQPQARICVVTFAYSPQNDDELELKVGDIIELISEVEEGWWKGKLNGKVGMFPSNFVKELPTPSDESAAAQDPA  169 (627)
T ss_pred             cccCCCCCccceeEEEEEeecCCCCceeeeeeccHHHhhhHhhhhhhhceecCcccccchhhceecCCCCcchhhhcCcc
Confidence             1111    12289999999999999999999999999998 9999999999999998742                   


Q ss_pred             --------------------------------------------------------------------------------
Q psy7077         167 --------------------------------------------------------------------------------  166 (336)
Q Consensus       167 --------------------------------------------------------------------------------  166 (336)
                                                                                                      
T Consensus       170 ~S~stlagst~~~ps~s~~SE~a~gsv~qPKkI~g~gfgdIfk~~pVklr~rt~~sete~~p~~~~i~~~l~asT~s~d~  249 (627)
T KOG4348|consen  170 ASASTLAGSTARTPSKSIGSEVAMGSVTQPKKIDGTGFGDIFKPAPVKLRLRTKFSETEKKPEKPFISSALSASTQSVDI  249 (627)
T ss_pred             cchhhhcCcCCCCCcccccchhhcccccCcccccCCCcccccCCccceecccccccccccccccchhhhccCccccCccc
Confidence                                                                                            


Q ss_pred             ---------ccceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecC
Q psy7077         167 ---------SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD  227 (336)
Q Consensus       167 ---------~~~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~  227 (336)
                               ....+|+++|.|++++.|||+|++||+|.++.+...+.|||+|+++|+.|.||-|||+.+.
T Consensus       250 tktd~~~~tKtKeycrv~F~Ye~qndDELt~KEgdil~lItK~cgdaGWweGELnGk~GvFPDNFv~lv~  319 (627)
T KOG4348|consen  250 TKTDTAETTKTKEYCRVKFVYEPQNDDELTLKEGDILILITKNCGDAGWWEGELNGKKGVFPDNFVELVQ  319 (627)
T ss_pred             cccccccchhhhhheeeeeeecCCCccceeeccccEEEEecccccccceeeeeecCccccCCchhhhhcC
Confidence                     0123599999999999999999999999998777888999999999999999999999877

>KOG4225|consensus

Probab=99.80  E-value=1.3e-19  Score=171.01  Aligned_cols=130  Identities=28%  Similarity=0.519  Sum_probs=104.3

Q ss_pred             eeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCCCCCCCCCCCCCC-CCccccccc
Q psy7077         171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVPGTELPG-DKHHLELIA  249 (336)
Q Consensus       171 ~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~~~~~~~~~~~~~-~~~~~~~~a  249 (336)
                      -++|+|+|+++...||+|.+||||.|+  .+.+..|+.|+.+|+.|+||+|||+.+.......+....+. .....+++|
T Consensus       232 ~aralf~F~~qt~kEL~~~kGDIVyI~--rkvD~nWyeGEhhGr~GifP~sYvE~~~~~e~~qP~~~~P~q~~~~g~a~A  309 (489)
T KOG4225|consen  232 AARALFDFEAQTPKELPFNKGDIVYIL--RKVDQNWYEGEHHGRVGIFPASYVEILTPREKAQPARPPPQQVLEQGEAIA  309 (489)
T ss_pred             hhhheeccccCCccccccCCCCEEEEE--eeccCceeeeeecceecceechheeecCcccccCcCCCCcccccccccccc
Confidence            478999999999999999999999995  56899999999999999999999999987444322221110 111224567


Q ss_pred             cCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeC--CceeEeeCCCeeecCCC
Q psy7077         250 EVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELR--GQTGWFPESYVEPCDET  319 (336)
Q Consensus       250 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~--G~~G~fPsnyV~~i~~~  319 (336)
                      .|++++....+                 |+|++||.|.++++++..|++|..-  |++|+||.+||+.+...
T Consensus       310 ~y~F~~~s~~E-----------------ls~~kge~v~L~r~vd~nw~eG~i~g~~rqgifP~SyVev~~~~  364 (489)
T KOG4225|consen  310 KYNFNADSPVE-----------------LSLRKGERVTLTRQVDENWYEGKIPGTNRQGIFPASYVEVIKSP  364 (489)
T ss_pred             cCCCCCCCchh-----------------cccccCceEEEEEeccCceeeccccccccccccchhHhhhhhcc
Confidence            77777666555                 4599999999999999999999875  89999999999987643

>KOG3601|consensus

Probab=99.65  E-value=1.1e-16  Score=138.70  Aligned_cols=196  Identities=14%  Similarity=0.172  Sum_probs=135.6

Q ss_pred             EEEecccCCCCCCCccccCCCEEEEEee--cCCceecccCCCcccccccc----cceeeeeeeecccCCCCCCCCCCCCE
Q psy7077         120 YIAAYPYDSTEPGDLTFNQDEVIYVTKK--ENDWWTGTIGDRTARFRGVS----EYRRYRAIYEFVSRNGDELSFQPGDI  193 (336)
Q Consensus       120 ~~al~dy~~~~~~eLs~~~Gd~i~v~~~--~~~Ww~g~~~~~~g~~p~~~----~~~~~~al~df~a~~~~eLs~~~Gdi  193 (336)
                      ++++++|.+...+||+|.+||.+.+.+.  +-+|...+..|..|..|.+.    ....+.+++++.......+..+.|+.
T Consensus         3 a~a~n~f~a~i~dELsFlkg~~lk~l~~~d~~nw~~ael~g~~g~~P~Nai~~~~~~wve~~i~r~~ae~~l~~~~~G~f   82 (222)
T KOG3601|consen    3 AVAKNDFLAGIRDELSFLKGDNLKILNMEDDINWYKAELDGPEGFIPKNAIRMKPHEWVEGLIPRPLAEDLLSKKRDGDF   82 (222)
T ss_pred             hhhhhhhhhcCcccceeecCCceEecchHHhhhhhhHhhcCccccCcccccccccccceecccccchhhhhhhccCcchh
Confidence            4678999999999999999999999887  56799999999999998763    34567788999888888888999999


Q ss_pred             EEEeeeecCCCCeEEEEeeCceeeecccceeecCCCCC------CCC----CCCC--CCCCccccccccCCCC---cCCC
Q psy7077         194 IMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGE------VVP----GTEL--PGDKHHLELIAEVPEN---ISDS  258 (336)
Q Consensus       194 i~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~~~~------~~~----~~~~--~~~~~~~~~~a~~~~~---~~~~  258 (336)
                      +...  .+..+||+.+.++...|.+|.++|++-.....      ++.    .-.+  +..+.....++.+.+.   ....
T Consensus        83 l~r~--s~sSPg~fsgsvr~~d~vqhfkvvrpa~~k~~lw~skfnslnplv~Y~rt~s~~r~~qi~l~d~~~~~~~~~~~  160 (222)
T KOG3601|consen   83 LIRL--SESSPGDFSGSVRFPDGVQHFKVVRPAFGKYFLWSSKFNSLNPLVSYHRTASQSRNQQIFLRDMEPPPAPLPPA  160 (222)
T ss_pred             hhhh--hhcCcccccccccCCCCceeccccccCccccccchhhccCCCCCcccCcccccccceeeeecccccccccCCCC
Confidence            8774  56899999999999999999999975432100      000    0000  1111000111111100   0000


Q ss_pred             CCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecC
Q psy7077         259 GGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD  317 (336)
Q Consensus       259 ~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~  317 (336)
                      .+.-..+..++.....-.+|.|+.||.++|+...+.-||.|.+.|+.|+||++||...+
T Consensus       161 ~~~~yqQa~~df~~~pp~ql~f~~gq~~~v~~~ss~~ww~Gs~lg~agiFpagyv~p~d  219 (222)
T KOG3601|consen  161 PTNYYQQALYDFQPQPPGQLAFRRGQQIQVLDSSSPFWWFGSKLGRAGIFPAGYVAPSD  219 (222)
T ss_pred             ccchhhhhcCCCCCCCchhhccccCCcceeecCCCcchhhccccCceeeecCccccccc
Confidence            01011111111111222348899999999999999999999999999999999997654

>KOG4792|consensus

Probab=99.64  E-value=4.9e-16  Score=135.64  Aligned_cols=150  Identities=21%  Similarity=0.308  Sum_probs=98.5

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe-eCceeeecccceeecCCCCCCCCC---CC-CCCCCc
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL-RGQTGWFPESYVEPCDETGEVVPG---TE-LPGDKH  243 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~-~g~~G~fP~~yve~~~~~~~~~~~---~~-~~~~~~  243 (336)
                      ...++++|||.+.+.++|.|++|+++.+.  ++.+..||.++. .|++|++|.+||+...+.......   +. ...-..
T Consensus       124 ~~~vr~~fdF~G~deeDLPFkkGeiL~I~--~K~eeqWW~Arns~Gk~GmIPvpYVe~~~~~~~~~~~~~~ga~e~si~q  201 (293)
T KOG4792|consen  124 AEYVRALFDFNGNDEEDLPFKKGEILRIR--DKPEEQWWNARNSEGKRGMIPVPYVEKYRPASASVSALIGGASESSIPQ  201 (293)
T ss_pred             hhheeeeeccCCCccccCCcccCcEEEEe--cCcHHHhhhhhccCCcccceechHHHhhhhhhcccccccCCcccccCCC
Confidence            45677899999999999999999999994  567888999996 699999999999987754322110   00 000000


Q ss_pred             cccccccCCCCcCCCCC-CC----cccc----CCCCCCCCCC-CCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCe
Q psy7077         244 HLELIAEVPENISDSGG-SG----IAVE----EGPGIPADIP-SPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYV  313 (336)
Q Consensus       244 ~~~~~a~~~~~~~~~~~-l~----~~~~----~~~~~~~~~~-~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV  313 (336)
                      +...+...+........ +.    .+++    ..++..++.+ .|.+++||+|.|.++.-+|-|+|++||+.|.||-.||
T Consensus       202 ~~~g~e~~s~a~~s~~~~l~l~~~lPa~Arv~q~RVPnAYDkTaL~levGdiVkVTk~ninGqwegElnGk~G~fPfThv  281 (293)
T KOG4792|consen  202 SGGGAERFSSASTSSDTPLPLQQNLPAYARVIQKRVPNAYDKTALALEVGDIVKVTKKNINGQWEGELNGKIGHFPFTHV  281 (293)
T ss_pred             CCCCCCCCCCCCcccCCcCccccCCChheeeehhcCCCccChhhhhhhcCcEEEEEeeccCceeeeeecCccccccceeE
Confidence            00011111110000000 00    0000    0011122222 2899999999999999999999999999999999999


Q ss_pred             eecCCCC
Q psy7077         314 EPCDETG  320 (336)
Q Consensus       314 ~~i~~~~  320 (336)
                      +..+...
T Consensus       282 rf~d~~~  288 (293)
T KOG4792|consen  282 RFTDVQN  288 (293)
T ss_pred             EeeccCC
Confidence            9987643

>PF14604 SH3_9: Variant SH3 domain; PDB: 2CRE_A 2E5K_A 2CT3_A 2DE0_X 2D8H_A 2DA9_A 2X3X_E 2X3W_D 2KRN_A 2ED0_A

Probab=99.47  E-value=4.7e-14  Score=96.83  Aligned_cols=49  Identities=45%  Similarity=0.935  Sum_probs=43.7

Q ss_pred             eeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeeccccee
Q psy7077         174 AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE  224 (336)
Q Consensus       174 al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve  224 (336)
                      |+|+|.++.++||+|++||+|.|+  .+.+++||+|+.+|+.|+||++||+
T Consensus         1 Al~~y~~~~~dELs~~~Gd~i~v~--~~~~~~W~~g~~~g~~G~~P~~yV~   49 (49)
T PF14604_consen    1 ALYDYEAQDPDELSFKKGDVITVL--EKSDDGWWYGRNTGRTGLFPANYVE   49 (49)
T ss_dssp             ESSCBCSSSTTB-EB-TTEEEEEE--EESSTSEEEEEETTEEEEEEGGGEE
T ss_pred             CCccCCCCCcCEeeEcCCCEEEEE--EeCCCCEEEEEECCEEEEECHHhCC
Confidence            789999999999999999999996  4478999999999999999999996

...

>KOG4792|consensus

Probab=99.46  E-value=9.8e-14  Score=121.33  Aligned_cols=109  Identities=26%  Similarity=0.461  Sum_probs=90.7

Q ss_pred             EEEEecccCCCCCCCccccCCCEEEEEee-cCCceecccC-CCccccccc------------------------------
Q psy7077         119 YYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIG-DRTARFRGV------------------------------  166 (336)
Q Consensus       119 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~Ww~g~~~-~~~g~~p~~------------------------------  166 (336)
                      +.+++|||.+++.+||.|++|+++.++++ ++.||.+++. |+.|.+|..                              
T Consensus       126 ~vr~~fdF~G~deeDLPFkkGeiL~I~~K~eeqWW~Arns~Gk~GmIPvpYVe~~~~~~~~~~~~~~ga~e~si~q~~~g  205 (293)
T KOG4792|consen  126 YVRALFDFNGNDEEDLPFKKGEILRIRDKPEEQWWNARNSEGKRGMIPVPYVEKYRPASASVSALIGGASESSIPQSGGG  205 (293)
T ss_pred             heeeeeccCCCccccCCcccCcEEEEecCcHHHhhhhhccCCcccceechHHHhhhhhhcccccccCCcccccCCCCCCC
Confidence            67789999999999999999999999999 8999999875 777766521                              


Q ss_pred             -------------------ccceeeeeeeecccC--CCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceee
Q psy7077         167 -------------------SEYRRYRAIYEFVSR--NGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP  225 (336)
Q Consensus       167 -------------------~~~~~~~al~df~a~--~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~  225 (336)
                                         .....++++++..+.  +...|.+++||+|.|+  ....+|-|+|+++|+.|.||.+||+.
T Consensus       206 ~e~~s~a~~s~~~~l~l~~~lPa~Arv~q~RVPnAYDkTaL~levGdiVkVT--k~ninGqwegElnGk~G~fPfThvrf  283 (293)
T KOG4792|consen  206 AERFSSASTSSDTPLPLQQNLPAYARVIQKRVPNAYDKTALALEVGDIVKVT--KKNINGQWEGELNGKIGHFPFTHVRF  283 (293)
T ss_pred             CCCCCCCCcccCCcCccccCCChheeeehhcCCCccChhhhhhhcCcEEEEE--eeccCceeeeeecCccccccceeEEe
Confidence                               012346777776543  6678999999999996  45788999999999999999999999


Q ss_pred             cCCC
Q psy7077         226 CDET  229 (336)
Q Consensus       226 ~~~~  229 (336)
                      .+..
T Consensus       284 ~d~~  287 (293)
T KOG4792|consen  284 TDVQ  287 (293)
T ss_pred             eccC
Confidence            8754

>KOG3632|consensus

Probab=99.43  E-value=3.6e-13  Score=137.62  Aligned_cols=135  Identities=24%  Similarity=0.423  Sum_probs=94.4

Q ss_pred             eeeeeeeecccC--------CCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCCCC-----------
Q psy7077         170 RRYRAIYEFVSR--------NGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETG-----------  230 (336)
Q Consensus       170 ~~~~al~df~a~--------~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~~~-----------  230 (336)
                      ..++|+|||++.        ...||.|++||||.|+ .+++.+|+|.|+++|++|++|+|+|.++.-..           
T Consensus      1139 rifVAlfDYDpl~MSpNpDAaEeELpFregqIikV~-GDkDadgFY~GE~ngr~GlIPcNmvae~~vd~eq~~~r~rqG~ 1217 (1335)
T KOG3632|consen 1139 RIFVALFDYDPLQMSPNPDAAEEELPFREGQIIKVL-GDKDADGFYMGELNGRRGLIPCNMVAEQPVDNEQTDRRWRQGL 1217 (1335)
T ss_pred             eeeEeeeccCccccCCCCChhhhccccccCcEEEEe-ccccccceeecccccccccccccccccccCCcHHHHHHHHhcc
Confidence            568999999874        5679999999999998 46788999999999999999999998865322           


Q ss_pred             -CCCCC------CCCC--------CCCccccccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEee-cCC
Q psy7077         231 -EVVPG------TELP--------GDKHHLELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQN-AEP  294 (336)
Q Consensus       231 -~~~~~------~~~~--------~~~~~~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~-~~~  294 (336)
                       ...+.      ...+        ...+.+-+..+|+...+..+-            +...+|.|..||||+|.++ +++
T Consensus      1218 lPsv~~~e~~~gs~~s~g~~k~vp~~p~~mvaa~dydpqeSSpg~------------dgeAelafraGdIitVfg~mddd 1285 (1335)
T KOG3632|consen 1218 LPSVPTEEMRKGSAFSDGQQKMVPWPPRQMVAASDYDPQESSPGL------------DGEAELAFRAGDIITVFGKMDDD 1285 (1335)
T ss_pred             CCCCCchhhhcccccCCCCccccCCchhhhhhhhcCCcccCCCCc------------ccceeeccccCCeEEeeccccCC
Confidence             00000      0000        011112222222222221110            1113477999999999977 567


Q ss_pred             CeEEEEeCCceeEeeCCCeeecC
Q psy7077         295 GWLAGELRGQTGWFPESYVEPCD  317 (336)
Q Consensus       295 ~W~~g~~~G~~G~fPsnyV~~i~  317 (336)
                      |+++|++||+.|++|+||++-.+
T Consensus      1286 gfyyGelngqkglvpsnfle~p~ 1308 (1335)
T KOG3632|consen 1286 GFYYGELNGQKGLVPSNFLEAPN 1308 (1335)
T ss_pred             cccccccCCccCccccccccCCC
Confidence            99999999999999999999764

>KOG2996|consensus

Probab=99.41  E-value=2.3e-13  Score=132.70  Aligned_cols=50  Identities=34%  Similarity=0.651  Sum_probs=41.0

Q ss_pred             CCCCCCCCCCCCCCCCCEEEEEeecC--CCeEEEEeCCceeEeeCCCeeecC
Q psy7077         268 GPGIPADIPSPIMGLGTVVPVKQNAE--PGWLAGELRGQTGWFPESYVEPCD  317 (336)
Q Consensus       268 ~~~~~~~~~~Lsf~~Gd~V~V~~~~~--~~W~~g~~~G~~G~fPsnyV~~i~  317 (336)
                      +.++..+..+|||++||+|.|+.+.+  .|||.|+.+|++||||++||+.-+
T Consensus       812 Ydf~ard~~eLSlk~GDvV~i~~k~g~d~GWWkGevngrvGwFPstYVee~~  863 (865)
T KOG2996|consen  812 YDFCARDMRELSLKEGDVVKIYDKVGEDQGWWKGEVNGRVGWFPSTYVEEDD  863 (865)
T ss_pred             cccCCCchhhcccccCCEEEEehhccccCceecceecCcccccccccccccC
Confidence            33334444569999999999998864  599999999999999999999754

>PF14604 SH3_9: Variant SH3 domain; PDB: 2CRE_A 2E5K_A 2CT3_A 2DE0_X 2D8H_A 2DA9_A 2X3X_E 2X3W_D 2KRN_A 2ED0_A

Probab=99.33  E-value=2e-12  Score=88.69  Aligned_cols=37  Identities=38%  Similarity=0.747  Sum_probs=33.5

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCee
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVE  314 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~  314 (336)
                      |+|++||+|.|+++.+++||.|+.+|++|+||+|||+
T Consensus        13 Ls~~~Gd~i~v~~~~~~~W~~g~~~g~~G~~P~~yV~   49 (49)
T PF14604_consen   13 LSFKKGDVITVLEKSDDGWWYGRNTGRTGLFPANYVE   49 (49)
T ss_dssp             -EB-TTEEEEEEEESSTSEEEEEETTEEEEEEGGGEE
T ss_pred             eeEcCCCEEEEEEeCCCCEEEEEECCEEEEECHHhCC
Confidence            6699999999999999999999999999999999996

...

>PF07653 SH3_2: Variant SH3 domain; InterPro: IPR011511 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]

Probab=99.33  E-value=1.6e-12  Score=91.38  Aligned_cols=55  Identities=49%  Similarity=0.992  Sum_probs=47.4

Q ss_pred             eeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeec
Q psy7077         171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC  226 (336)
Q Consensus       171 ~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~  226 (336)
                      .++|++||.+..+++|+|++||+|.|+ .+..+++||.|+.+|+.||||++||+++
T Consensus         1 ~~~a~~d~~~~~~~~Ls~~~Gd~i~v~-~~~~~~~ww~~~~~g~~G~~P~~~v~~~   55 (55)
T PF07653_consen    1 YYRAIFDYVAEDPDELSFKKGDVIEVL-GEKDDDGWWLGENNGRRGWFPSSYVEEI   55 (55)
T ss_dssp             EEEESSSBESSSTTB-EB-TTEEEEEE-EEECSTSEEEEEETTEEEEEEGGGEEEH
T ss_pred             CEEEeEEECCCCCCceEEecCCEEEEE-EeecCCCEEEEEECCcEEEEcHHHEEEC
Confidence            478999999999999999999999996 2457779999999999999999999874

They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. This entry represents a variant of the SH3 domain.; PDB: 1I1J_B 1K0X_A 1HJD_A 2KEA_A 1KJW_A 1JXM_A 1JXO_B 2EBP_A 2DL3_A 2EYX_A ....

>KOG2996|consensus

Probab=99.26  E-value=4.7e-12  Score=123.72  Aligned_cols=57  Identities=40%  Similarity=0.824  Sum_probs=50.9

Q ss_pred             eeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecC
Q psy7077         171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD  227 (336)
Q Consensus       171 ~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~  227 (336)
                      .++|-|||.+++..||||+.||+|.++..-..+.|||+|+.+|+.||||++||++-+
T Consensus       807 ~AvarYdf~ard~~eLSlk~GDvV~i~~k~g~d~GWWkGevngrvGwFPstYVee~~  863 (865)
T KOG2996|consen  807 TAVARYDFCARDMRELSLKEGDVVKIYDKVGEDQGWWKGEVNGRVGWFPSTYVEEDD  863 (865)
T ss_pred             eeeeccccCCCchhhcccccCCEEEEehhccccCceecceecCcccccccccccccC
Confidence            467889999999999999999999997655567899999999999999999998754

>KOG2070|consensus

Probab=99.17  E-value=2e-11  Score=117.38  Aligned_cols=58  Identities=47%  Similarity=0.843  Sum_probs=53.0

Q ss_pred             cceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecC
Q psy7077         168 EYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD  227 (336)
Q Consensus       168 ~~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~  227 (336)
                      ..-.++|-|.|.+.+.|||+|.+||+|.|+  +..++|||+|..+|++||||+|||.++.
T Consensus        16 ~pLvvrAkf~F~gsNnDELsf~KgDvItVT--q~eeGGWWEGTlng~TGWFPsnYV~eik   73 (661)
T KOG2070|consen   16 NPLVVRAKFNFQGSNNDELSFSKGDVITVT--QVEEGGWWEGTLNGRTGWFPSNYVREIK   73 (661)
T ss_pred             CceEEEEEeecccCCCceeccccCCEEEEE--EeccCcceeccccCccCccchHHHHHHh
Confidence            345689999999999999999999999996  4578999999999999999999999887

>KOG2070|consensus

Probab=99.13  E-value=2.1e-11  Score=117.23  Aligned_cols=56  Identities=34%  Similarity=0.613  Sum_probs=48.0

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~  319 (336)
                      +-|.+.+..++++++                 +|.+||+|+|.+..++|||+|.++|++||||+|||..|...
T Consensus        20 vrAkf~F~gsNnDEL-----------------sf~KgDvItVTq~eeGGWWEGTlng~TGWFPsnYV~eik~e   75 (661)
T KOG2070|consen   20 VRAKFNFQGSNNDEL-----------------SFSKGDVITVTQVEEGGWWEGTLNGRTGWFPSNYVREIKSE   75 (661)
T ss_pred             EEEEeecccCCCcee-----------------ccccCCEEEEEEeccCcceeccccCccCccchHHHHHHhhc
Confidence            345666777766665                 49999999999999999999999999999999999988744

>KOG3601|consensus

Probab=99.10  E-value=6.2e-11  Score=103.18  Aligned_cols=163  Identities=18%  Similarity=0.241  Sum_probs=116.9

Q ss_pred             hHHHHHHHhhccceeeccCCceEEecccccc-cccccccCCCcccchhhhhccccccccccccCcChhhhHHHhccccCc
Q psy7077          39 PLLLRILQNWAHQRLKITKDHTIKAKEEGDL-KDTQSSSDGSQDVFCSVHLQLSTKEKDLEVNNSNLDDLKKTLANMMSD  117 (336)
Q Consensus        39 ~~~~~~~~~~~h~~lk~~k~~~i~~~ee~~~-~~~~~t~~~~r~~~~~~~~qi~sk~~~l~~~~~~l~el~~~~~~~~~~  117 (336)
                      ++|+-.+.+....+|+|.||..+++...-+. .|+-....+.              ...++.|-..++          ..
T Consensus         3 a~a~n~f~a~i~dELsFlkg~~lk~l~~~d~~nw~~ael~g~--------------~g~~P~Nai~~~----------~~   58 (222)
T KOG3601|consen    3 AVAKNDFLAGIRDELSFLKGDNLKILNMEDDINWYKAELDGP--------------EGFIPKNAIRMK----------PH   58 (222)
T ss_pred             hhhhhhhhhcCcccceeecCCceEecchHHhhhhhhHhhcCc--------------cccCcccccccc----------cc
Confidence            4566667788899999999999888633321 1222222221              111222221111          22


Q ss_pred             cEEEEecccCCCCCCCccccCCCEEEEEee-cCCceecccCCCcccccc-------------------------------
Q psy7077         118 KYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTARFRG-------------------------------  165 (336)
Q Consensus       118 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~Ww~g~~~~~~g~~p~-------------------------------  165 (336)
                      .+|-+++++...+..++..+.|+.+..+++ +.+|+.|.++...|.++.                               
T Consensus        59 ~wve~~i~r~~ae~~l~~~~~G~fl~r~s~sSPg~fsgsvr~~d~vqhfkvvrpa~~k~~lw~skfnslnplv~Y~rt~s  138 (222)
T KOG3601|consen   59 EWVEGLIPRPLAEDLLSKKRDGDFLIRLSESSPGDFSGSVRFPDGVQHFKVVRPAFGKYFLWSSKFNSLNPLVSYHRTAS  138 (222)
T ss_pred             cceecccccchhhhhhhccCcchhhhhhhhcCcccccccccCCCCceeccccccCccccccchhhccCCCCCcccCcccc
Confidence            368889999999999999999999888877 899999887655543311                               


Q ss_pred             ---------------------cccceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeeccccee
Q psy7077         166 ---------------------VSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE  224 (336)
Q Consensus       166 ---------------------~~~~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve  224 (336)
                                           .......+++|+|+++.+.+|.|++||.+.|+  ...+..||.|+..|+.|+||++|+.
T Consensus       139 ~~r~~qi~l~d~~~~~~~~~~~~~~~yqQa~~df~~~pp~ql~f~~gq~~~v~--~~ss~~ww~Gs~lg~agiFpagyv~  216 (222)
T KOG3601|consen  139 QSRNQQIFLRDMEPPPAPLPPAPTNYYQQALYDFQPQPPGQLAFRRGQQIQVL--DSSSPFWWFGSKLGRAGIFPAGYVA  216 (222)
T ss_pred             cccceeeeecccccccccCCCCccchhhhhcCCCCCCCchhhccccCCcceee--cCCCcchhhccccCceeeecCcccc
Confidence                                 01223467999999999999999999999994  5688899999999999999999986


Q ss_pred             ecC
Q psy7077         225 PCD  227 (336)
Q Consensus       225 ~~~  227 (336)
                      ..+
T Consensus       217 p~d  219 (222)
T KOG3601|consen  217 PSD  219 (222)
T ss_pred             ccc
Confidence            543

>KOG3632|consensus

Probab=99.10  E-value=1.2e-10  Score=119.52  Aligned_cols=109  Identities=26%  Similarity=0.508  Sum_probs=91.9

Q ss_pred             EEEEecccCCCC--------CCCccccCCCEEEEEee--cCCceecccCCCccccccc----------------------
Q psy7077         119 YYIAAYPYDSTE--------PGDLTFNQDEVIYVTKK--ENDWWTGTIGDRTARFRGV----------------------  166 (336)
Q Consensus       119 ~~~al~dy~~~~--------~~eLs~~~Gd~i~v~~~--~~~Ww~g~~~~~~g~~p~~----------------------  166 (336)
                      .++|||||++-.        ..||+|++|++|.|..+  .++++.|+++|+.|.+|.+                      
T Consensus      1140 ifVAlfDYDpl~MSpNpDAaEeELpFregqIikV~GDkDadgFY~GE~ngr~GlIPcNmvae~~vd~eq~~~r~rqG~lP 1219 (1335)
T KOG3632|consen 1140 IFVALFDYDPLQMSPNPDAAEEELPFREGQIIKVLGDKDADGFYMGELNGRRGLIPCNMVAEQPVDNEQTDRRWRQGLLP 1219 (1335)
T ss_pred             eeEeeeccCccccCCCCChhhhccccccCcEEEEeccccccceeecccccccccccccccccccCCcHHHHHHHHhccCC
Confidence            899999999753        45999999999999987  6889999999999888753                      


Q ss_pred             ---------------------c-cceeeeeeeecccC-------CCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceee
Q psy7077         167 ---------------------S-EYRRYRAIYEFVSR-------NGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGW  217 (336)
Q Consensus       167 ---------------------~-~~~~~~al~df~a~-------~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~  217 (336)
                                           + ....++|.|||.++       ...+|.|..||||.|. ...+++|+++|+++|++|+
T Consensus      1220 sv~~~e~~~gs~~s~g~~k~vp~~p~~mvaa~dydpqeSSpg~dgeAelafraGdIitVf-g~mdddgfyyGelngqkgl 1298 (1335)
T KOG3632|consen 1220 SVPTEEMRKGSAFSDGQQKMVPWPPRQMVAASDYDPQESSPGLDGEAELAFRAGDIITVF-GKMDDDGFYYGELNGQKGL 1298 (1335)
T ss_pred             CCCchhhhcccccCCCCccccCCchhhhhhhhcCCcccCCCCcccceeeccccCCeEEee-ccccCCcccccccCCccCc
Confidence                                 0 12356789999876       3468999999999997 4568889999999999999


Q ss_pred             ecccceeecCC
Q psy7077         218 FPESYVEPCDE  228 (336)
Q Consensus       218 fP~~yve~~~~  228 (336)
                      +|++|++..+.
T Consensus      1299 vpsnfle~p~~ 1309 (1335)
T KOG3632|consen 1299 VPSNFLEAPNA 1309 (1335)
T ss_pred             cccccccCCCc
Confidence            99999987753

>PF07653 SH3_2: Variant SH3 domain; InterPro: IPR011511 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]

Probab=99.09  E-value=1.6e-10  Score=81.22  Aligned_cols=39  Identities=41%  Similarity=0.835  Sum_probs=34.1

Q ss_pred             CCCCCCCEEEEE-eecCCCeEEEEeCCceeEeeCCCeeec
Q psy7077         278 PIMGLGTVVPVK-QNAEPGWLAGELRGQTGWFPESYVEPC  316 (336)
Q Consensus       278 Lsf~~Gd~V~V~-~~~~~~W~~g~~~G~~G~fPsnyV~~i  316 (336)
                      |+|++||+|.|+ ++.+++||.++.+|+.||||++||+++
T Consensus        16 Ls~~~Gd~i~v~~~~~~~~ww~~~~~g~~G~~P~~~v~~~   55 (55)
T PF07653_consen   16 LSFKKGDVIEVLGEKDDDGWWLGENNGRRGWFPSSYVEEI   55 (55)
T ss_dssp             -EB-TTEEEEEEEEECSTSEEEEEETTEEEEEEGGGEEEH
T ss_pred             eEEecCCEEEEEEeecCCCEEEEEECCcEEEEcHHHEEEC
Confidence            669999999999 888889999999999999999999874

They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. This entry represents a variant of the SH3 domain.; PDB: 1I1J_B 1K0X_A 1HJD_A 2KEA_A 1KJW_A 1JXM_A 1JXO_B 2EBP_A 2DL3_A 2EYX_A ....

>smart00326 SH3 Src homology 3 domains

Probab=99.06  E-value=4.5e-10  Score=78.48  Aligned_cols=55  Identities=44%  Similarity=0.900  Sum_probs=48.8

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEee-Cceeeecccceeec
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR-GQTGWFPESYVEPC  226 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~-g~~G~fP~~yve~~  226 (336)
                      ..++|+|+|.+..+++|+|++||.|.+.  ...+++||.++.. |+.||||.+|++.+
T Consensus         3 ~~~~a~~~~~~~~~~~l~~~~Gd~v~v~--~~~~~~w~~~~~~~~~~G~vP~~~v~~~   58 (58)
T smart00326        3 PQVRALYDYTAQDPDELSFKKGDIITVL--EKSDDGWWKGRLGRGKEGLFPSNYVEEI   58 (58)
T ss_pred             cEEEEeeeeCCCCCCCCCCCCCCEEEEE--EcCCCCeEEEEeCCCCEEEEchHHEEEC
Confidence            4678999999999999999999999995  3458899999986 99999999999863

Src homology 3 (SH3) domains bind to target proteins through sequences containing proline and hydrophobic amino acids. Pro-containing polypeptides may bind to SH3 domains in 2 different binding orientations.

>KOG2199|consensus

Probab=99.06  E-value=4.1e-11  Score=112.77  Aligned_cols=59  Identities=37%  Similarity=0.727  Sum_probs=53.7

Q ss_pred             ccceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecC
Q psy7077         167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD  227 (336)
Q Consensus       167 ~~~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~  227 (336)
                      ...+++||||||++...+||+|++||||.|+  ++.++.||.|++++..|+||+|||...-
T Consensus       213 ~~~rkVRALYDFeAaE~nELsFkaGdIItVL--d~s~~~WWKG~~~~~~GlFPsnfVT~~l  271 (462)
T KOG2199|consen  213 TVVRKVRALYDFEAAEDNELSFKAGDIITVL--DDSDPNWWKGENHRGIGLFPSNFVTADL  271 (462)
T ss_pred             ccchhhhhhhcccccCCCccceecCcEEEEc--ccCCcchhccccCCcccccchhhhhhhh
Confidence            4567899999999999999999999999995  6789999999999999999999998644

>PF00018 SH3_1: SH3 domain; InterPro: IPR001452 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]

Probab=99.06  E-value=1.6e-10  Score=78.81  Aligned_cols=46  Identities=43%  Similarity=0.897  Sum_probs=40.0

Q ss_pred             eeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEee--Cceeeecc
Q psy7077         173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR--GQTGWFPE  220 (336)
Q Consensus       173 ~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~--g~~G~fP~  220 (336)
                      +|+|+|.++.++||+|++||.|.|+  +..+++||.++..  |+.||||+
T Consensus         1 ~Alydf~~~~~~eLs~~~Gd~i~v~--~~~~~~Ww~~~~~~~~~~G~vP~   48 (48)
T PF00018_consen    1 RALYDFDAEDPDELSFKKGDIIEVL--EKSDDGWWKVRNESTGKEGWVPS   48 (48)
T ss_dssp             EESSCBETSSTTBSEB-TTEEEEEE--EESSSSEEEEEETTTTEEEEEEG
T ss_pred             CCCeeeCCCCCCEEeEECCCEEEEE--EecCCCEEEEEECCCCcEEEeeC
Confidence            5899999999999999999999996  4467799999974  68999996

They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. The crystal structure of the SH3 domain of the cytoskeletal protein spectrin, and the solution structures of SH3 domains of phospholipase C (PLC-y) and phosphatidylinositol 3-kinase p85 alpha-subunit, have been determined [, , ]. In spite of relatively limited sequence similarity, their overall structures are similar. The domains belong to the alpha+beta structural class, with 5 to 8 beta-strands forming 2 tightly-packed, anti-parallel beta-sheets arranged in a barrel-like structure, and intervening loops sometimes forming helices. Conserved aliphatic and aromatic residues form a hydrophobic core (A11, L23, A29, V34, W42, L52 and V59 in PLC-y []) and a hydrophobic pocket on the molecular surface (L12, F13, W53 and P55 in PLC-y). The conserved core is believed to stabilise the fold, while the pocket is thought to serve as a binding site for target proteins. Conserved carboxylic amino acids located in the loops, on the periphery of the pocket (D14 and E22), may be involved in protein-protein interactions via proline-rich regions. The N- and C-termini are packed in close proximity, indicating that they are independent structural modules.; GO: 0005515 protein binding; PDB: 1UHF_A 1W1F_A 1WA7_A 1SEM_A 1KFZ_A 2SEM_B 1K76_A 3SEM_B 1X2Q_A 2J06_B ....

>cd00174 SH3 Src homology 3 domains; SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies

Probab=99.01  E-value=7.1e-10  Score=76.47  Aligned_cols=51  Identities=49%  Similarity=0.963  Sum_probs=45.7

Q ss_pred             eeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeC-ceeeeccccee
Q psy7077         172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRG-QTGWFPESYVE  224 (336)
Q Consensus       172 ~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g-~~G~fP~~yve  224 (336)
                      ++|+|+|.++.+++|+|.+||.|.+.  ...++|||.++..+ +.||||.+|++
T Consensus         2 ~~a~~~~~~~~~~~l~~~~Gd~v~v~--~~~~~~w~~~~~~~~~~G~vP~~~v~   53 (54)
T cd00174           2 VRALYDYDARDPDELSFKKGDIIEVL--EKSDDGWWEGRLLGGKRGLFPSNYVE   53 (54)
T ss_pred             EEEEEeeCCCCCCCCCCCCCCEEEEE--EcCCCCeEEEEECCCCEEEEccccCc
Confidence            67999999999999999999999995  34678999999865 99999999986

>PF00018 SH3_1: SH3 domain; InterPro: IPR001452 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]

Probab=99.00  E-value=2.5e-10  Score=77.88  Aligned_cols=45  Identities=24%  Similarity=0.637  Sum_probs=40.4

Q ss_pred             EEecccCCCCCCCccccCCCEEEEEee-cCCceecccC--CCcccccc
Q psy7077         121 IAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIG--DRTARFRG  165 (336)
Q Consensus       121 ~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~Ww~g~~~--~~~g~~p~  165 (336)
                      +|+|+|.++.++||+|++||++.|+++ +++||.++..  ++.|+||.
T Consensus         1 ~Alydf~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~~~~~~~~~~G~vP~   48 (48)
T PF00018_consen    1 RALYDFDAEDPDELSFKKGDIIEVLEKSDDGWWKVRNESTGKEGWVPS   48 (48)
T ss_dssp             EESSCBETSSTTBSEB-TTEEEEEEEESSSSEEEEEETTTTEEEEEEG
T ss_pred             CCCeeeCCCCCCEEeEECCCEEEEEEecCCCEEEEEECCCCcEEEeeC
Confidence            589999999999999999999999998 8899999986  58899984

They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. The crystal structure of the SH3 domain of the cytoskeletal protein spectrin, and the solution structures of SH3 domains of phospholipase C (PLC-y) and phosphatidylinositol 3-kinase p85 alpha-subunit, have been determined [, , ]. In spite of relatively limited sequence similarity, their overall structures are similar. The domains belong to the alpha+beta structural class, with 5 to 8 beta-strands forming 2 tightly-packed, anti-parallel beta-sheets arranged in a barrel-like structure, and intervening loops sometimes forming helices. Conserved aliphatic and aromatic residues form a hydrophobic core (A11, L23, A29, V34, W42, L52 and V59 in PLC-y []) and a hydrophobic pocket on the molecular surface (L12, F13, W53 and P55 in PLC-y). The conserved core is believed to stabilise the fold, while the pocket is thought to serve as a binding site for target proteins. Conserved carboxylic amino acids located in the loops, on the periphery of the pocket (D14 and E22), may be involved in protein-protein interactions via proline-rich regions. The N- and C-termini are packed in close proximity, indicating that they are independent structural modules.; GO: 0005515 protein binding; PDB: 1UHF_A 1W1F_A 1WA7_A 1SEM_A 1KFZ_A 2SEM_B 1K76_A 3SEM_B 1X2Q_A 2J06_B ....

>KOG1118|consensus

Probab=98.99  E-value=2.1e-10  Score=104.76  Aligned_cols=58  Identities=36%  Similarity=0.706  Sum_probs=53.6

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~  228 (336)
                      .+.|+|+|||++++.+||.|++||+|.|+  ...+.+||.|+..|.+|+||.|||+.+.+
T Consensus       306 ~p~cralYdFepenEgEL~fkeGDlI~l~--~QIdenWyeG~~~g~sG~FPvnYv~vlvp  363 (366)
T KOG1118|consen  306 QPCCRALYDFEPENEGELDFKEGDLITLT--NQIDENWYEGEKHGESGMFPVNYVEVLVP  363 (366)
T ss_pred             chhheeeeccCCCCCCccCcccCceeeeh--hhcCcchhhheecCccCccccceeEEecc
Confidence            46799999999999999999999999995  56899999999999999999999998764

>KOG2199|consensus

Probab=98.81  E-value=1.4e-09  Score=102.59  Aligned_cols=48  Identities=23%  Similarity=0.542  Sum_probs=46.4

Q ss_pred             EEEEecccCCCCCCCccccCCCEEEEEee-cCCceecccCCCccccccc
Q psy7077         119 YYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTARFRGV  166 (336)
Q Consensus       119 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~Ww~g~~~~~~g~~p~~  166 (336)
                      .++|||||++.+++||+|++||+|.|++. +.+||.|++.+..|.||.+
T Consensus       217 kVRALYDFeAaE~nELsFkaGdIItVLd~s~~~WWKG~~~~~~GlFPsn  265 (462)
T KOG2199|consen  217 KVRALYDFEAAEDNELSFKAGDIITVLDDSDPNWWKGENHRGIGLFPSN  265 (462)
T ss_pred             hhhhhhcccccCCCccceecCcEEEEcccCCcchhccccCCcccccchh
Confidence            78999999999999999999999999999 9999999999999999976

>KOG1118|consensus

Probab=98.76  E-value=5.7e-09  Score=95.50  Aligned_cols=41  Identities=27%  Similarity=0.556  Sum_probs=38.6

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  318 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~  318 (336)
                      |.|++||+|+|+.+.|++||.|+..|.+|+||.|||+.+-+
T Consensus       323 L~fkeGDlI~l~~QIdenWyeG~~~g~sG~FPvnYv~vlvp  363 (366)
T KOG1118|consen  323 LDFKEGDLITLTNQIDENWYEGEKHGESGMFPVNYVEVLVP  363 (366)
T ss_pred             cCcccCceeeehhhcCcchhhheecCccCccccceeEEecc
Confidence            44999999999999999999999999999999999998864

>KOG2546|consensus

Probab=98.75  E-value=3.6e-09  Score=100.56  Aligned_cols=52  Identities=29%  Similarity=0.505  Sum_probs=44.6

Q ss_pred             ccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecC
Q psy7077         249 AEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD  317 (336)
Q Consensus       249 a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~  317 (336)
                      +-|++..+..+++                 +|.+|-+|.|++++|||||+|..+|.+|+||.|||+.+-
T Consensus       428 ~iydy~~~KddeL-----------------sf~E~ailyv~kknddgw~EgV~~~VTglFpgnyve~~~  479 (483)
T KOG2546|consen  428 AIYDYTADKDDEL-----------------SFAEGAILYVLKKNDDGWYEGVQDGVTGLFPGNYVEPLK  479 (483)
T ss_pred             hhccccccccccc-----------------ccccccEEEEEEecCCcchhheecCcceeccCccccccc
Confidence            4456666665554                 499999999999999999999999999999999999774

>KOG0162|consensus

Probab=98.73  E-value=5.4e-09  Score=104.91  Aligned_cols=54  Identities=39%  Similarity=0.799  Sum_probs=50.4

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceee
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP  225 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~  225 (336)
                      +.|.|+|+|.+++.+||+|++||+|.+.  .++..|||.|+.+|+.||||.+||++
T Consensus      1052 p~~~A~Y~y~gq~~dEls~~~~diIei~--~edpSGWw~gk~~~keG~~P~~Yv~~ 1105 (1106)
T KOG0162|consen 1052 PVCEALYDYPGQDVDELSFKKGDIIEIM--REDPSGWWLGKLNGKEGLFPGNYVTE 1105 (1106)
T ss_pred             cceeeeccCCCCCcccccccCCCEEEEe--ccCCCcchhhccCCcccccccccccc
Confidence            6799999999999999999999999995  56788999999999999999999975

>smart00326 SH3 Src homology 3 domains

Probab=98.71  E-value=3e-08  Score=69.04  Aligned_cols=39  Identities=33%  Similarity=0.740  Sum_probs=34.9

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEeC-CceeEeeCCCeeec
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGELR-GQTGWFPESYVEPC  316 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~~-G~~G~fPsnyV~~i  316 (336)
                      |+|++||+|.|+++.+++||.++.. |+.||||++||+.+
T Consensus        19 l~~~~Gd~v~v~~~~~~~w~~~~~~~~~~G~vP~~~v~~~   58 (58)
T smart00326       19 LSFKKGDIITVLEKSDDGWWKGRLGRGKEGLFPSNYVEEI   58 (58)
T ss_pred             CCCCCCCEEEEEEcCCCCeEEEEeCCCCEEEEchHHEEEC
Confidence            5699999999999988888888876 99999999999864

Src homology 3 (SH3) domains bind to target proteins through sequences containing proline and hydrophobic amino acids. Pro-containing polypeptides may bind to SH3 domains in 2 different binding orientations.

>KOG2856|consensus

Probab=98.64  E-value=9e-09  Score=96.14  Aligned_cols=56  Identities=41%  Similarity=0.815  Sum_probs=51.0

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEee-Cceeeecccceeec
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR-GQTGWFPESYVEPC  226 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~-g~~G~fP~~yve~~  226 (336)
                      ..++|||||.++..|||+|++||.+..++ +.+..||..|+++ |+.|++|+|||+.+
T Consensus       415 v~vraLYDY~gqE~DElsfkaGd~l~kl~-eeDeqGWC~Grl~~G~vGLyPAnYVe~~  471 (472)
T KOG2856|consen  415 VRVRALYDYAGQEGDELSFKAGDELEKLE-EEDEQGWCKGRLDSGRVGLYPANYVECI  471 (472)
T ss_pred             eeEEeeeccCcccccchhhccccHhhhcC-CccccccccccccCCcccccchhhhhcc
Confidence            67899999999999999999999999874 5678899999986 99999999999864

>cd00174 SH3 Src homology 3 domains; SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies

Probab=98.59  E-value=1e-07  Score=65.52  Aligned_cols=39  Identities=33%  Similarity=0.739  Sum_probs=33.4

Q ss_pred             CCCCCCCCEEEEEeecCCCeEEEEeCC-ceeEeeCCCeee
Q psy7077         277 SPIMGLGTVVPVKQNAEPGWLAGELRG-QTGWFPESYVEP  315 (336)
Q Consensus       277 ~Lsf~~Gd~V~V~~~~~~~W~~g~~~G-~~G~fPsnyV~~  315 (336)
                      +|+|.+||+|.|++..+++||.++..+ ++||||++||++
T Consensus        15 ~l~~~~Gd~v~v~~~~~~~w~~~~~~~~~~G~vP~~~v~~   54 (54)
T cd00174          15 ELSFKKGDIIEVLEKSDDGWWEGRLLGGKRGLFPSNYVEE   54 (54)
T ss_pred             CCCCCCCCEEEEEEcCCCCeEEEEECCCCEEEEccccCcC
Confidence            366999999999999878888887755 999999999863

>KOG0162|consensus

Probab=98.59  E-value=4.6e-08  Score=98.38  Aligned_cols=40  Identities=28%  Similarity=0.669  Sum_probs=37.3

Q ss_pred             CCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeec
Q psy7077         277 SPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPC  316 (336)
Q Consensus       277 ~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i  316 (336)
                      +|+|++||+|.|++++..|||.|+.+|+.||||.|||+++
T Consensus      1067 Els~~~~diIei~~edpSGWw~gk~~~keG~~P~~Yv~~~ 1106 (1106)
T KOG0162|consen 1067 ELSFKKGDIIEIMREDPSGWWLGKLNGKEGLFPGNYVTEY 1106 (1106)
T ss_pred             cccccCCCEEEEeccCCCcchhhccCCccccccccccccC
Confidence            3669999999999999999999999999999999999863

>KOG1264|consensus

Probab=98.45  E-value=7.3e-08  Score=97.95  Aligned_cols=57  Identities=37%  Similarity=0.788  Sum_probs=51.1

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCc-eeeecccceeecCC
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQ-TGWFPESYVEPCDE  228 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~-~G~fP~~yve~~~~  228 (336)
                      ..++|||+|.++.+|||+|.+|-+|+..  .+..+|||.|..+|+ .+|||+|||+.+.+
T Consensus       775 vt~kAL~~Yka~r~DELSFpk~aiItnv--~keeg~wWrGdYGg~iq~wfPsnyVeei~~  832 (1267)
T KOG1264|consen  775 VTVKALYDYKAKRSDELSFPKGAIITNV--SKEEGGWWRGDYGGRIQQWFPSNYVEEIST  832 (1267)
T ss_pred             hhhhhhhccccCCcccccccccceeEee--eccCCceeecccccceeeeccHHHhhhhcc
Confidence            4588999999999999999999999985  557888999999876 69999999998875

>KOG0515|consensus

Probab=98.43  E-value=8.2e-08  Score=93.69  Aligned_cols=60  Identities=27%  Similarity=0.524  Sum_probs=51.9

Q ss_pred             cceeeeeeeecccCCCCCCCCCCCCEEEEeee-ecCCCCeEEEEeeCceeeecccceeecC
Q psy7077         168 EYRRYRAIYEFVSRNGDELSFQPGDIIMVPVK-QNAEPGWLAGELRGQTGWFPESYVEPCD  227 (336)
Q Consensus       168 ~~~~~~al~df~a~~~~eLs~~~Gdii~v~~~-~~~~~gW~~g~~~g~~G~fP~~yve~~~  227 (336)
                      +...+.|+|||+++..|||+|.+||.++|+++ +..+..||+++++|+.|+||.||+-.+.
T Consensus       682 N~G~vYAlwdYeaqf~DELsf~eGd~lTvirr~d~~eteWWwa~lng~eGyVPRnylgLyP  742 (752)
T KOG0515|consen  682 NKGVVYALWDYEAQFEDELSFDEGDELTVIRRDDEVETEWWWARLNGEEGYVPRNYLGLYP  742 (752)
T ss_pred             ccceeEEeecccccccccccccCCceeEEEecCCcchhhhhhHhhcCcccccchhhhhcCc
Confidence            34567899999999999999999999999865 3355679999999999999999997764

>KOG2546|consensus

Probab=98.33  E-value=2e-07  Score=88.80  Aligned_cols=56  Identities=41%  Similarity=0.808  Sum_probs=51.6

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecC
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD  227 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~  227 (336)
                      .+++++|||.+...+||+|.+|-+|.|+  .++++|||+|-.+|.+|+||.|||+.+.
T Consensus       424 EkVv~iydy~~~KddeLsf~E~ailyv~--kknddgw~EgV~~~VTglFpgnyve~~~  479 (483)
T KOG2546|consen  424 EKVVAIYDYTADKDDELSFAEGAILYVL--KKNDDGWYEGVQDGVTGLFPGNYVEPLK  479 (483)
T ss_pred             HHHHhhcccccccccccccccccEEEEE--EecCCcchhheecCcceeccCccccccc
Confidence            5688999999999999999999999996  4589999999999999999999998764

>KOG1702|consensus

Probab=98.19  E-value=1.2e-06  Score=76.10  Aligned_cols=56  Identities=38%  Similarity=0.773  Sum_probs=49.4

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe--eCceeeecccceeec
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPC  226 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~--~g~~G~fP~~yve~~  226 (336)
                      ...++|.|||.|++.+|++|.-||.|.-  .+..++||.+|.+  .|.+|..|+||++.+
T Consensus       207 gktyra~ydysaqdedevsF~dgd~ivn--vq~iddGWmygtv~rtg~tGmlpaNyie~v  264 (264)
T KOG1702|consen  207 GKTYRAFYDYSAQDEDEVSFVDGDYIVN--VQSIDDGWMYGTVVRTGWTGMLPANYIEFV  264 (264)
T ss_pred             CccchhhccCcccCcceeEEecCCeEEE--EEeccCCceeeEEEeccccCCCchhheeeC
Confidence            4679999999999999999999999865  4668899999986  699999999999853

>KOG3655|consensus

Probab=98.15  E-value=8e-07  Score=86.09  Aligned_cols=57  Identities=35%  Similarity=0.732  Sum_probs=50.9

Q ss_pred             cceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe-eCceeeecccceeec
Q psy7077         168 EYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL-RGQTGWFPESYVEPC  226 (336)
Q Consensus       168 ~~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~-~g~~G~fP~~yve~~  226 (336)
                      ....++|+|||++.+..|++|..+|+|.+  ++..+.|||.|.. +|+.|+||+|||+.+
T Consensus       426 ~~q~A~A~~dyqAAddtEisf~p~d~it~--Id~vdegww~g~~pdG~~glfPaNyV~li  483 (484)
T KOG3655|consen  426 EPQTARALYDYQAADDTEISFDPPDAITL--IDQVDEGWWTGQGPDGEVGLFPANYVELI  483 (484)
T ss_pred             cCCCccccccccccCCcccccCCcccccc--ccccCCccccccCCCCCcCcccccccccC
Confidence            34678999999999999999999999988  4668899999995 799999999999875

>KOG2856|consensus

Probab=98.12  E-value=5e-07  Score=84.70  Aligned_cols=40  Identities=28%  Similarity=0.586  Sum_probs=35.5

Q ss_pred             CCCCCCCCEEEEEeecCC-CeEEEEeC-CceeEeeCCCeeec
Q psy7077         277 SPIMGLGTVVPVKQNAEP-GWLAGELR-GQTGWFPESYVEPC  316 (336)
Q Consensus       277 ~Lsf~~Gd~V~V~~~~~~-~W~~g~~~-G~~G~fPsnyV~~i  316 (336)
                      +|+|++||.+++++..|+ ||+.|+++ |++|+||+|||+-+
T Consensus       430 ElsfkaGd~l~kl~eeDeqGWC~Grl~~G~vGLyPAnYVe~~  471 (472)
T KOG2856|consen  430 ELSFKAGDELEKLEEEDEQGWCKGRLDSGRVGLYPANYVECI  471 (472)
T ss_pred             chhhccccHhhhcCCccccccccccccCCcccccchhhhhcc
Confidence            488999999999877654 99999997 99999999999854

>KOG1843|consensus

Probab=98.11  E-value=1.3e-06  Score=82.96  Aligned_cols=57  Identities=35%  Similarity=0.618  Sum_probs=51.0

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceee
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP  225 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~  225 (336)
                      ...+.++|+|..+.+++|+|++||+|.++.+...-..||.|+.+++.|+||+|||+.
T Consensus       416 ~n~a~a~ysfage~~GDl~f~kgDii~il~ks~s~~dwwtgr~~~~egifPanyv~~  472 (473)
T KOG1843|consen  416 PNIATALYSFAGEQPGDLSFQKGDIITILKKSDSANDWWTGRGNGYEGIFPANYVSL  472 (473)
T ss_pred             cceeeeeehhccCCCCCcccccCceEEEecCCcchhhHHHhhccccccccccceecc
Confidence            347999999999999999999999999876555567899999999999999999974

>KOG3655|consensus

Probab=98.03  E-value=2e-06  Score=83.35  Aligned_cols=43  Identities=23%  Similarity=0.504  Sum_probs=38.2

Q ss_pred             CCCCCCCCCCEEEEEeecCCCeEEEEe-CCceeEeeCCCeeecC
Q psy7077         275 IPSPIMGLGTVVPVKQNAEPGWLAGEL-RGQTGWFPESYVEPCD  317 (336)
Q Consensus       275 ~~~Lsf~~Gd~V~V~~~~~~~W~~g~~-~G~~G~fPsnyV~~i~  317 (336)
                      ..+++|-.+|.|+++...|+|||.|.. +|..|+||+|||+++.
T Consensus       441 dtEisf~p~d~it~Id~vdegww~g~~pdG~~glfPaNyV~li~  484 (484)
T KOG3655|consen  441 DTEISFDPPDAITLIDQVDEGWWTGQGPDGEVGLFPANYVELIE  484 (484)
T ss_pred             CcccccCCccccccccccCCccccccCCCCCcCcccccccccCC
Confidence            345779999999999999999999975 7999999999999873

>KOG1264|consensus

Probab=98.01  E-value=3.6e-06  Score=86.01  Aligned_cols=41  Identities=29%  Similarity=0.662  Sum_probs=37.5

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEeCC-ceeEeeCCCeeecCC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGELRG-QTGWFPESYVEPCDE  318 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~~G-~~G~fPsnyV~~i~~  318 (336)
                      |||.+|.+|+++++.++|||.|..|| .+||||+|||+.|.+
T Consensus       791 LSFpk~aiItnv~keeg~wWrGdYGg~iq~wfPsnyVeei~~  832 (1267)
T KOG1264|consen  791 LSFPKGAIITNVSKEEGGWWRGDYGGRIQQWFPSNYVEEIST  832 (1267)
T ss_pred             ccccccceeEeeeccCCceeecccccceeeeccHHHhhhhcc
Confidence            55999999999999999999999986 589999999999875

>KOG3875|consensus

Probab=98.00  E-value=1.2e-06  Score=80.62  Aligned_cols=59  Identities=32%  Similarity=0.470  Sum_probs=47.6

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeec---CCCCeEEEE-e-eCceeeecccceeecCC
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQN---AEPGWLAGE-L-RGQTGWFPESYVEPCDE  228 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~---~~~gW~~g~-~-~g~~G~fP~~yve~~~~  228 (336)
                      ..|+|+|||.++++.||+|++||++.|..+++   .+..||..+ . +|..||||.|||+.+..
T Consensus       269 ~~arA~YdF~a~np~ElSlk~Gdml~ia~K~dq~~~~~~gW~lat~dg~~tG~iP~NYvkIi~r  332 (362)
T KOG3875|consen  269 EFARALYDFVARNPVELSLKKGDMLAIASKEDQQGVRCEGWLLATRDGGTTGLIPINYVKIIGR  332 (362)
T ss_pred             HHHHHHhhhhcCCHHHhhhhcCchhhcccccccCCCCCcceeeeeccCCeeeeeehhhhhhhhc
Confidence            57899999999999999999999999874432   223366665 4 56789999999999875

>KOG3523|consensus

Probab=97.76  E-value=4.2e-06  Score=83.18  Aligned_cols=57  Identities=35%  Similarity=0.759  Sum_probs=50.9

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe--eCceeeecccceeecCC
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPCDE  228 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~--~g~~G~fP~~yve~~~~  228 (336)
                      +.+.+...|.+..+|||+++.+|++.|+  .+..+||++|+.  +|.+||||..|++.+..
T Consensus       609 pQv~~~~sy~a~q~Del~Le~~Dvv~v~--~k~~DGWl~GeRl~Dge~GWFP~~~veeI~~  667 (695)
T KOG3523|consen  609 PQVQCVHSYKAKQPDELTLELADVVNVL--QKTPDGWLEGERLRDGERGWFPSSYVEEITN  667 (695)
T ss_pred             ChhheeeccccCCCceeeeehhhhhhhh--hcCCCccccccccccCccCcchHHHHHHhcC
Confidence            4677899999999999999999999995  568899999984  79999999999999873

>KOG2222|consensus

Probab=97.71  E-value=7.3e-06  Score=79.47  Aligned_cols=61  Identities=38%  Similarity=0.730  Sum_probs=53.1

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCCCCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGE  231 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~~~~  231 (336)
                      ..+++|+.||.....+||.|+++|+|+++  ...+..-|.|+.+|-+||||+.||+.+++.+.
T Consensus       548 ~krakal~df~r~dddelgfrkndiitii--sekdehcwvgelnglrgwfpakfvellder~k  608 (848)
T KOG2222|consen  548 AKRAKALHDFAREDDDELGFRKNDIITII--SEKDEHCWVGELNGLRGWFPAKFVELLDERGK  608 (848)
T ss_pred             hHHHHHHhhhhhccccccccccccEEEEe--ecCCcceeeeccccccccchHHHHHHHHhccc
Confidence            35789999999999999999999999996  34556677899999999999999999887543

>KOG0515|consensus

Probab=97.68  E-value=2e-05  Score=77.36  Aligned_cols=54  Identities=19%  Similarity=0.523  Sum_probs=46.6

Q ss_pred             EEEEecccCCCCCCCccccCCCEEEEEee----cCCceecccCCCcccccccccceeeeeeee
Q psy7077         119 YYIAAYPYDSTEPGDLTFNQDEVIYVTKK----ENDWWTGTIGDRTARFRGVSEYRRYRAIYE  177 (336)
Q Consensus       119 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~----~~~Ww~g~~~~~~g~~p~~~~~~~~~al~d  177 (336)
                      ..-|||||+++..|||+|.+||.+.|+.+    +.+||..+++|+.|++|.+     +..||.
T Consensus       685 ~vYAlwdYeaqf~DELsf~eGd~lTvirr~d~~eteWWwa~lng~eGyVPRn-----ylgLyP  742 (752)
T KOG0515|consen  685 VVYALWDYEAQFEDELSFDEGDELTVIRRDDEVETEWWWARLNGEEGYVPRN-----YLGLYP  742 (752)
T ss_pred             eeEEeecccccccccccccCCceeEEEecCCcchhhhhhHhhcCcccccchh-----hhhcCc
Confidence            45589999999999999999999999987    6789999999999999864     455554

>KOG4773|consensus

Probab=97.67  E-value=1.1e-06  Score=82.04  Aligned_cols=59  Identities=32%  Similarity=0.644  Sum_probs=52.9

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  229 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~~  229 (336)
                      ...+.+++||.++...||.|.+||++.+.  ..++.+||.|..+|.+||+|.+|+..++.-
T Consensus       175 ~q~~~a~~df~gns~~EL~l~agdV~~~~--~r~ek~W~~gk~R~~~g~yp~sF~~~ld~f  233 (386)
T KOG4773|consen  175 AQRAEASFDFPGNSKLELNLVAGDVEFLL--SRDEKYWLLGKVRGLTGYYPDSFVKQLDDF  233 (386)
T ss_pred             hHHHHhhccCCCCccceeeeehhhHHHHH--hhcccceeeeeeccccccccHHhhhhhccC
Confidence            45688999999999999999999999985  458899999999999999999999988643

>KOG3875|consensus

Probab=97.53  E-value=3.9e-05  Score=70.81  Aligned_cols=42  Identities=24%  Similarity=0.461  Sum_probs=34.6

Q ss_pred             CCCCCCCCEEEEEeec------CCCeEEEEe-CCceeEeeCCCeeecCC
Q psy7077         277 SPIMGLGTVVPVKQNA------EPGWLAGEL-RGQTGWFPESYVEPCDE  318 (336)
Q Consensus       277 ~Lsf~~Gd~V~V~~~~------~~~W~~g~~-~G~~G~fPsnyV~~i~~  318 (336)
                      +|||++||++.|.-+.      .+||..... +|.+||||.|||+++.-
T Consensus       284 ElSlk~Gdml~ia~K~dq~~~~~~gW~lat~dg~~tG~iP~NYvkIi~r  332 (362)
T KOG3875|consen  284 ELSLKKGDMLAIASKEDQQGVRCEGWLLATRDGGTTGLIPINYVKIIGR  332 (362)
T ss_pred             HhhhhcCchhhcccccccCCCCCcceeeeeccCCeeeeeehhhhhhhhc
Confidence            4679999999998543      357777777 78999999999999975

>KOG3523|consensus

Probab=97.48  E-value=1.4e-05  Score=79.69  Aligned_cols=42  Identities=45%  Similarity=0.844  Sum_probs=38.4

Q ss_pred             CCCCCCCCEEEEEeecCCCeEEEEe--CCceeEeeCCCeeecCC
Q psy7077         277 SPIMGLGTVVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPCDE  318 (336)
Q Consensus       277 ~Lsf~~Gd~V~V~~~~~~~W~~g~~--~G~~G~fPsnyV~~i~~  318 (336)
                      +|+++.||+|.|+.+..|||++|+.  +|.+||||++||+.|..
T Consensus       624 el~Le~~Dvv~v~~k~~DGWl~GeRl~Dge~GWFP~~~veeI~~  667 (695)
T KOG3523|consen  624 ELTLELADVVNVLQKTPDGWLEGERLRDGERGWFPSSYVEEITN  667 (695)
T ss_pred             eeeeehhhhhhhhhcCCCccccccccccCccCcchHHHHHHhcC
Confidence            4889999999999999999999974  89999999999998864

>KOG4278|consensus

Probab=97.48  E-value=0.0001  Score=74.42  Aligned_cols=58  Identities=29%  Similarity=0.647  Sum_probs=49.3

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe-eCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL-RGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~-~g~~G~fP~~yve~~~~  228 (336)
                      ...++|||||.+..+..|++.+||.+.|+.. ..++.|.+++. +|+ ||||+||+.++..
T Consensus        90 pNLFVALYDFvasGdntLSitKGeklRvLGY-N~NgEWcEartKNGq-GWVPSNyItPvNS  148 (1157)
T KOG4278|consen   90 PNLFVALYDFVASGDNTLSITKGEKLRVLGY-NKNGEWCEARTKNGQ-GWVPSNYITPVNS  148 (1157)
T ss_pred             CceeEeeeeeeccccceeeeecCceEEEeee-cCCCcceeecccCCC-ccccccccccccc
Confidence            3578999999999999999999999999853 45667988885 565 9999999998763

>KOG1843|consensus

Probab=97.45  E-value=7.6e-05  Score=71.24  Aligned_cols=48  Identities=35%  Similarity=0.729  Sum_probs=45.5

Q ss_pred             EEEEecccCCCCCCCccccCCCEEEEEee---cCCceecccCCCccccccc
Q psy7077         119 YYIAAYPYDSTEPGDLTFNQDEVIYVTKK---ENDWWTGTIGDRTARFRGV  166 (336)
Q Consensus       119 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~---~~~Ww~g~~~~~~g~~p~~  166 (336)
                      .++|+|+|..+.++||+|++||+|.++++   -++||.|..+++.|+||.+
T Consensus       418 ~a~a~ysfage~~GDl~f~kgDii~il~ks~s~~dwwtgr~~~~egifPan  468 (473)
T KOG1843|consen  418 IATALYSFAGEQPGDLSFQKGDIITILKKSDSANDWWTGRGNGYEGIFPAN  468 (473)
T ss_pred             eeeeeehhccCCCCCcccccCceEEEecCCcchhhHHHhhccccccccccc
Confidence            89999999999999999999999999998   5789999999999999976

>KOG2528|consensus

Probab=97.40  E-value=0.00012  Score=70.74  Aligned_cols=58  Identities=38%  Similarity=0.730  Sum_probs=51.8

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe-eCceeeecccceeecCC
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL-RGQTGWFPESYVEPCDE  228 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~-~g~~G~fP~~yve~~~~  228 (336)
                      .+++++|||.+.+..|++...||++.+. .+....|||.|.+ .|.+|+||+.||+.+..
T Consensus         3 sk~RamyDf~~E~~sElsi~~~evl~i~-~e~~~~GwLeg~Nsrge~GlfPa~yVeV~~~   61 (490)
T KOG2528|consen    3 SKARAMYDFQSEGHSELSIWEGEVLSIT-SEDVIEGWLEGSNSRGERGLFPASYVEVTRL   61 (490)
T ss_pred             cchhhhcchhhcccccccccccceeeec-CcccccccccCCCccCccCCCcccceeeecc
Confidence            3578999999999999999999999987 4667889999985 79999999999999873

>KOG3725|consensus

Probab=97.39  E-value=4e-05  Score=68.97  Aligned_cols=59  Identities=29%  Similarity=0.500  Sum_probs=53.8

Q ss_pred             cceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeec
Q psy7077         168 EYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC  226 (336)
Q Consensus       168 ~~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~  226 (336)
                      ...+++++|||++..+.||++-..++|.|....-.+..|..|+.+++.|-+|.+|++.+
T Consensus       316 gtrkArVlyDYdAa~s~ElslladeiitVyslpGMD~dwlmgErGnkkGKvPvtYlELL  374 (375)
T KOG3725|consen  316 GTRKARVLYDYDAALSQELSLLADEIITVYSLPGMDADWLMGERGNKKGKVPVTYLELL  374 (375)
T ss_pred             cccceeeeecccccchhhhhhhhcceEEEEecCCCChHHhhhhhcCCCCCcchhHHHhc
Confidence            46789999999999999999999999999876667888999999999999999999865

>KOG4773|consensus

Probab=97.34  E-value=5.9e-05  Score=70.63  Aligned_cols=45  Identities=33%  Similarity=0.585  Sum_probs=41.2

Q ss_pred             CCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCCCC
Q psy7077         277 SPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGE  321 (336)
Q Consensus       277 ~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~~~  321 (336)
                      +|.|.+||++.+..+++.+||.|...|.+||||.+|++.+++-..
T Consensus       191 EL~l~agdV~~~~~r~ek~W~~gk~R~~~g~yp~sF~~~ld~fpe  235 (386)
T KOG4773|consen  191 ELNLVAGDVEFLLSRDEKYWLLGKVRGLTGYYPDSFVKQLDDFPE  235 (386)
T ss_pred             eeeeehhhHHHHHhhcccceeeeeeccccccccHHhhhhhccCcc
Confidence            477999999999999999999999999999999999999976554

>KOG1702|consensus

Probab=97.17  E-value=0.00035  Score=61.00  Aligned_cols=39  Identities=28%  Similarity=0.489  Sum_probs=34.4

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEE--eCCceeEeeCCCeeec
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGE--LRGQTGWFPESYVEPC  316 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~--~~G~~G~fPsnyV~~i  316 (336)
                      .+|.-||.|.-....||||-.|.  .+|.+|..|+|||+-+
T Consensus       224 vsF~dgd~ivnvq~iddGWmygtv~rtg~tGmlpaNyie~v  264 (264)
T KOG1702|consen  224 VSFVDGDYIVNVQSIDDGWMYGTVVRTGWTGMLPANYIEFV  264 (264)
T ss_pred             eEEecCCeEEEEEeccCCceeeEEEeccccCCCchhheeeC
Confidence            45999999999999999999885  4899999999999853

>KOG2222|consensus

Probab=97.11  E-value=0.00011  Score=71.39  Aligned_cols=47  Identities=28%  Similarity=0.565  Sum_probs=41.9

Q ss_pred             CCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCCCCC
Q psy7077         276 PSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEV  322 (336)
Q Consensus       276 ~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~~~~  322 (336)
                      .+|.|++.|+|+|+..-|+.-|.|++||-+||||+-||+.+++-++.
T Consensus       563 delgfrkndiitiisekdehcwvgelnglrgwfpakfvellder~k~  609 (848)
T KOG2222|consen  563 DELGFRKNDIITIISEKDEHCWVGELNGLRGWFPAKFVELLDERGKL  609 (848)
T ss_pred             cccccccccEEEEeecCCcceeeeccccccccchHHHHHHHHhccce
Confidence            34779999999999999998899999999999999999999876553

>KOG1451|consensus

Probab=97.01  E-value=0.00092  Score=66.71  Aligned_cols=40  Identities=43%  Similarity=0.794  Sum_probs=35.7

Q ss_pred             CCCCCCCCEE-EEEeecCCCeEEEEeCCceeEeeCCCeeec
Q psy7077         277 SPIMGLGTVV-PVKQNAEPGWLAGELRGQTGWFPESYVEPC  316 (336)
Q Consensus       277 ~Lsf~~Gd~V-~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i  316 (336)
                      +|+|..|.++ .|.+..++||..|+++|++|++|+|||+.+
T Consensus       772 elsf~~gt~f~nv~~S~e~Gwl~GtLnGktglip~nyve~l  812 (812)
T KOG1451|consen  772 ELSFEPGTIFTNVYESNEDGWLVGTLNGKTGLIPSNYVEPL  812 (812)
T ss_pred             cccccCcceeeeecccCCCCceeeecCCCcccCcccccCcC
Confidence            4889999999 566688999999999999999999999863

>KOG1451|consensus

Probab=96.90  E-value=0.00085  Score=66.94  Aligned_cols=57  Identities=42%  Similarity=0.816  Sum_probs=49.3

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeec
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC  226 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~  226 (336)
                      ..++.++|.-.+....+++|..|.++.-. .....+||..|+++|++|++|+|||+++
T Consensus       756 ~rk~k~lyAc~a~h~selsf~~gt~f~nv-~~S~e~Gwl~GtLnGktglip~nyve~l  812 (812)
T KOG1451|consen  756 SRRVKTLYACTADHHSELSFEPGTIFTNV-YESNEDGWLVGTLNGKTGLIPSNYVEPL  812 (812)
T ss_pred             cccccceeccCCCCcccccccCcceeeee-cccCCCCceeeecCCCcccCcccccCcC
Confidence            35678899999999999999999998653 3457889999999999999999999864

>KOG4429|consensus

Probab=96.85  E-value=0.00045  Score=63.41  Aligned_cols=55  Identities=29%  Similarity=0.361  Sum_probs=49.6

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeec
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC  226 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~  226 (336)
                      ..|.++|.|+++..+||....||++.+.  +....|||.|++.|..|-||+.|++..
T Consensus       364 ~lcdafYSfqarqddel~~e~gditif~--Ekkeeg~~f~rl~gd~~hf~Aa~iEea  418 (421)
T KOG4429|consen  364 ILCDAFYSFQARQDDELGGEIGDITIFD--EKKEEGPTFCRLLGDFEHFHAAEIEEA  418 (421)
T ss_pred             HHhhhhhccccccccccCCcccceeeec--CcccCCCceeeeccccCCCcHHHHHHh
Confidence            4588999999999999999999999884  557889999999999999999999764

>KOG3557|consensus

Probab=96.77  E-value=0.00039  Score=69.96  Aligned_cols=57  Identities=25%  Similarity=0.560  Sum_probs=50.2

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe-eCceeeecccceeecCCC
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL-RGQTGWFPESYVEPCDET  229 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~-~g~~G~fP~~yve~~~~~  229 (336)
                      ..+.++|||.+++..||++.+||++.|+   .+..+||.++. .|+.|++|+|.+..+.+.
T Consensus       501 k~~~~~Ydf~arNs~ELsV~k~E~LEvl---~d~R~WW~~kn~~G~~GyvP~nIL~~~~~~  558 (721)
T KOG3557|consen  501 KWVLVLYDFQARNSSELSVKKGEVLEVL---DDGRKWWKVKNGHGRAGYVPSNILAPLQPE  558 (721)
T ss_pred             eeeeeehhhhcccchhhhhhhhhhhhhh---hccccceeccCccCCCCCcchhhhccCCCc
Confidence            4688999999999999999999999995   36778999987 599999999999988753

>KOG3775|consensus

Probab=96.56  E-value=0.0015  Score=62.03  Aligned_cols=60  Identities=35%  Similarity=0.664  Sum_probs=51.2

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe--eCceeeecccceeecCCCCC
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPCDETGE  231 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~--~g~~G~fP~~yve~~~~~~~  231 (336)
                      ..-++++.|.++.++||-+..||-|.|  ..+.++-|++|.+  .|++|+||+.|+-.++....
T Consensus       263 ~THR~~~rFvPRHpDELeLEIgDav~V--e~eadD~W~~G~NlRTG~~GIFPA~ya~evd~~ee  324 (482)
T KOG3775|consen  263 QTHRAVFRFVPRHPDELELEIGDAVLV--EAEADDFWFEGFNLRTGERGIFPAFYAHEVDGPEE  324 (482)
T ss_pred             hhhhhhhhccCCCcceeeeecCCeeEe--eecccchhhccccccccccccccceeEEecCCchh
Confidence            346799999999999999999999999  3457778999975  69999999999998875443

>KOG4575|consensus

Probab=96.54  E-value=0.0024  Score=64.30  Aligned_cols=56  Identities=27%  Similarity=0.411  Sum_probs=45.3

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEE-e--eCceeeecccceeecCC
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE-L--RGQTGWFPESYVEPCDE  228 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~-~--~g~~G~fP~~yve~~~~  228 (336)
                      ..++|+|.+.++..++|.|.+||++.+++   ..+|||++. .  ....|+||+|||..++.
T Consensus         9 ~~vrA~y~w~ge~eGdl~f~egDlie~tr---I~dgkwwi~lhrNk~~~g~fpsNFvhcLd~   67 (874)
T KOG4575|consen    9 CMVRALYAWPGEREGDLKFTEGDLIEQTR---IEDGKWWILLHRNKDEDGLFPSNFVHCLDK   67 (874)
T ss_pred             ceEEeeccCCCCcccccceecccceeEEe---eccceeeeeeeecccccccCcccceeeccc
Confidence            46889999999999999999999999964   456666664 3  35679999999976653

>KOG4278|consensus

Probab=96.50  E-value=0.0025  Score=64.65  Aligned_cols=48  Identities=13%  Similarity=0.306  Sum_probs=44.3

Q ss_pred             EEEEecccCCCCCCCccccCCCEEEEEee--cCCceecccCCCccccccc
Q psy7077         119 YYIAAYPYDSTEPGDLTFNQDEVIYVTKK--ENDWWTGTIGDRTARFRGV  166 (336)
Q Consensus       119 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~--~~~Ww~g~~~~~~g~~p~~  166 (336)
                      +++|||||.+..++.|++.+||.+.|+.-  +.+|.+.+..+..||+|++
T Consensus        92 LFVALYDFvasGdntLSitKGeklRvLGYN~NgEWcEartKNGqGWVPSN  141 (1157)
T KOG4278|consen   92 LFVALYDFVASGDNTLSITKGEKLRVLGYNKNGEWCEARTKNGQGWVPSN  141 (1157)
T ss_pred             eeEeeeeeeccccceeeeecCceEEEeeecCCCcceeecccCCCcccccc
Confidence            99999999999999999999999999886  8999999887667999986

>KOG4575|consensus

Probab=96.30  E-value=0.0042  Score=62.54  Aligned_cols=40  Identities=18%  Similarity=0.337  Sum_probs=34.2

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEe--CCceeEeeCCCeeecC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPCD  317 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~--~G~~G~fPsnyV~~i~  317 (336)
                      |.|-+||+|++++-.|+|||.+..  ....|+||+|||-.++
T Consensus        25 l~f~egDlie~trI~dgkwwi~lhrNk~~~g~fpsNFvhcLd   66 (874)
T KOG4575|consen   25 LKFTEGDLIEQTRIEDGKWWILLHRNKDEDGLFPSNFVHCLD   66 (874)
T ss_pred             cceecccceeEEeeccceeeeeeeecccccccCcccceeecc
Confidence            449999999999999999998865  4678999999996655

>PF08239 SH3_3: Bacterial SH3 domain; InterPro: IPR013247 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]

Probab=96.19  E-value=0.0082  Score=41.44  Aligned_cols=35  Identities=31%  Similarity=0.658  Sum_probs=30.5

Q ss_pred             CCCCCEEEEEeecCCC-eEEE-EeCCceeEeeCCCee
Q psy7077         280 MGLGTVVPVKQNAEPG-WLAG-ELRGQTGWFPESYVE  314 (336)
Q Consensus       280 f~~Gd~V~V~~~~~~~-W~~g-~~~G~~G~fPsnyV~  314 (336)
                      +..|+.|.|+.+.+++ |+.. ..+|+.||++++||+
T Consensus        19 l~~g~~v~v~~~~~~~~W~~V~~~~g~~GwV~~~~l~   55 (55)
T PF08239_consen   19 LPKGEKVTVLGESGDGNWYKVRTYDGKTGWVSSSYLS   55 (55)
T ss_dssp             EETTSEEEEEEEETT--EEEEEEETTEEEEEEGGCEE
T ss_pred             EeCCCEEEEEEEcCCcEEEEEECcCCcEEEEEccccC
Confidence            7889999999988776 8888 779999999999985

They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. A homologue of the SH3 domain has been found in a number of different bacterial proteins including glycyl-glycine endopeptidase, bacteriocin and some hypothetical proteins.; PDB: 3PVQ_B 3NPF_B 3H41_A 2KQ8_A 2KRS_A 2KYB_A 2KT8_A.

>KOG3725|consensus

Probab=96.10  E-value=0.011  Score=53.69  Aligned_cols=47  Identities=26%  Similarity=0.461  Sum_probs=43.3

Q ss_pred             EEEEecccCCCCCCCccccCCCEEEEEee---cCCceecccCCCcccccc
Q psy7077         119 YYIAAYPYDSTEPGDLTFNQDEVIYVTKK---ENDWWTGTIGDRTARFRG  165 (336)
Q Consensus       119 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~---~~~Ww~g~~~~~~g~~p~  165 (336)
                      .++++|||++..+.||++-++|+|.|.+-   |.+|..|+.+++.|-+|-
T Consensus       319 kArVlyDYdAa~s~ElslladeiitVyslpGMD~dwlmgErGnkkGKvPv  368 (375)
T KOG3725|consen  319 KARVLYDYDAALSQELSLLADEIITVYSLPGMDADWLMGERGNKKGKVPV  368 (375)
T ss_pred             ceeeeecccccchhhhhhhhcceEEEEecCCCChHHhhhhhcCCCCCcch
Confidence            58899999999999999999999999886   999999999999988874

>KOG0197|consensus

Probab=96.07  E-value=0.0024  Score=63.24  Aligned_cols=57  Identities=28%  Similarity=0.624  Sum_probs=48.2

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCE-EEEeeeecCCCCeEEEEe--eCceeeecccceeecC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDI-IMVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPCD  227 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdi-i~v~~~~~~~~gW~~g~~--~g~~G~fP~~yve~~~  227 (336)
                      ...++|+|+|.+..+.+|+|.+||. ..+  .+..+..||+++.  .+..|++|+|||....
T Consensus        11 ~~~~valyd~~s~~~~dLsf~~Gd~~~~~--~~~~~~~Ww~ar~~~~~~~g~ip~N~v~~~~   70 (468)
T KOG0197|consen   11 ETIVVALYDYASRTPEDLSFRKGDVVLIL--LETTNGDWWRARSLQLGQEGYIPSNYVARNR   70 (468)
T ss_pred             cceEEEeccccCCCccccccccCceEEEe--eccCChhHHHHHHhhcCCCCcCcCceeeccc
Confidence            4578999999999999999999999 555  3556788999874  5889999999998753

>KOG3775|consensus

Probab=95.95  E-value=0.0045  Score=58.79  Aligned_cols=52  Identities=27%  Similarity=0.450  Sum_probs=43.4

Q ss_pred             CCCCCCCCCCCCCCCEEEEEeecCCCeEEEE--eCCceeEeeCCCeeecCCCCC
Q psy7077         270 GIPADIPSPIMGLGTVVPVKQNAEPGWLAGE--LRGQTGWFPESYVEPCDETGE  321 (336)
Q Consensus       270 ~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~--~~G~~G~fPsnyV~~i~~~~~  321 (336)
                      .++....+|.|+.||-|.|-+..+|-|++|.  ..|+.|+||+.|+-.++-..+
T Consensus       271 FvPRHpDELeLEIgDav~Ve~eadD~W~~G~NlRTG~~GIFPA~ya~evd~~ee  324 (482)
T KOG3775|consen  271 FVPRHPDELELEIGDAVLVEAEADDFWFEGFNLRTGERGIFPAFYAHEVDGPEE  324 (482)
T ss_pred             ccCCCcceeeeecCCeeEeeecccchhhccccccccccccccceeEEecCCchh
Confidence            4455556799999999999999999999995  379999999999998875433

>KOG3771|consensus

Probab=95.92  E-value=0.0034  Score=61.40  Aligned_cols=56  Identities=23%  Similarity=0.294  Sum_probs=45.7

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceee
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP  225 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~  225 (336)
                      ...+.++|+|.++..++|+|+.||+|.|+. .++.+.||.|.+.|..+-+|.+|+..
T Consensus       400 ~~~v~a~~dy~a~~~deLsf~~gd~i~vi~-s~~~~e~~eg~~mg~ke~~~~~~~~~  455 (460)
T KOG3771|consen  400 LYKVKALHDYAAQDTDELSFEAGDVILVIP-SDNPEEQDEGWLMGVKESDWNGLFPL  455 (460)
T ss_pred             ccceeccccccccccccccccCCCEEEEec-CCCccchhhHHHhhhcccccccceec
Confidence            356889999999999999999999999975 45667799998887776666666643

>KOG3771|consensus

Probab=95.70  E-value=0.0059  Score=59.79  Aligned_cols=46  Identities=17%  Similarity=0.164  Sum_probs=39.3

Q ss_pred             EEEEecccCCCCCCCccccCCCEEEEEee--cCCceecccCCCccccc
Q psy7077         119 YYIAAYPYDSTEPGDLTFNQDEVIYVTKK--ENDWWTGTIGDRTARFR  164 (336)
Q Consensus       119 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~--~~~Ww~g~~~~~~g~~p  164 (336)
                      ...++|||.+++.+||+|..||+|.|+..  .++||.|...|..+-++
T Consensus       402 ~v~a~~dy~a~~~deLsf~~gd~i~vi~s~~~~e~~eg~~mg~ke~~~  449 (460)
T KOG3771|consen  402 KVKALHDYAAQDTDELSFEAGDVILVIPSDNPEEQDEGWLMGVKESDW  449 (460)
T ss_pred             ceeccccccccccccccccCCCEEEEecCCCccchhhHHHhhhccccc
Confidence            67889999999999999999999999987  78898888766555444

>KOG4429|consensus

Probab=95.37  E-value=0.011  Score=54.38  Aligned_cols=39  Identities=18%  Similarity=0.152  Sum_probs=35.7

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeec
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPC  316 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i  316 (336)
                      |....||++.+-++-.+|||.|+++|..|-||+.||+..
T Consensus       380 l~~e~gditif~Ekkeeg~~f~rl~gd~~hf~Aa~iEea  418 (421)
T KOG4429|consen  380 LGGEIGDITIFDEKKEEGPTFCRLLGDFEHFHAAEIEEA  418 (421)
T ss_pred             cCCcccceeeecCcccCCCceeeeccccCCCcHHHHHHh
Confidence            448999999999999999999999999999999999854

>smart00287 SH3b Bacterial SH3 domain homologues

Probab=95.28  E-value=0.032  Score=39.44  Aligned_cols=35  Identities=26%  Similarity=0.375  Sum_probs=30.5

Q ss_pred             CCCCCEEEEEeecCCCeEEEEeC-CceeEeeCCCee
Q psy7077         280 MGLGTVVPVKQNAEPGWLAGELR-GQTGWFPESYVE  314 (336)
Q Consensus       280 f~~Gd~V~V~~~~~~~W~~g~~~-G~~G~fPsnyV~  314 (336)
                      +..|+.|.|+...+++|+..+.. |+.||+|..++.
T Consensus        27 l~~g~~v~i~~~~~~~W~~v~~~~g~~Gwi~~~~~~   62 (63)
T smart00287       27 LKKGDKVKVLGVDGQDWAKITYGSGQRGYVPGYVVN   62 (63)
T ss_pred             ecCCCEEEEEEccCCceEEEEcCCCCEEEEEeeeec
Confidence            78899999999887689988875 999999988874

>KOG2528|consensus

Probab=95.17  E-value=0.013  Score=56.90  Aligned_cols=41  Identities=37%  Similarity=0.680  Sum_probs=34.7

Q ss_pred             CCCCCCCCEEEEEe-ecCCCeEEEE-eCCceeEeeCCCeeecC
Q psy7077         277 SPIMGLGTVVPVKQ-NAEPGWLAGE-LRGQTGWFPESYVEPCD  317 (336)
Q Consensus       277 ~Lsf~~Gd~V~V~~-~~~~~W~~g~-~~G~~G~fPsnyV~~i~  317 (336)
                      +++...||++.+.. ...+||+.|. ..|.+|+||++||+++.
T Consensus        18 Elsi~~~evl~i~~e~~~~GwLeg~Nsrge~GlfPa~yVeV~~   60 (490)
T KOG2528|consen   18 ELSIWEGEVLSITSEDVIEGWLEGSNSRGERGLFPASYVEVTR   60 (490)
T ss_pred             cccccccceeeecCcccccccccCCCccCccCCCcccceeeec
Confidence            35589999999984 4678999985 58999999999999986

>KOG3557|consensus

Probab=94.99  E-value=0.0089  Score=60.49  Aligned_cols=48  Identities=19%  Similarity=0.500  Sum_probs=44.9

Q ss_pred             EEEEecccCCCCCCCccccCCCEEEEEeecCCceecccC-CCccccccc
Q psy7077         119 YYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGTIG-DRTARFRGV  166 (336)
Q Consensus       119 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~Ww~g~~~-~~~g~~p~~  166 (336)
                      +..++|||.+....||+..+||+..|+...-.||..++. |+.|++|.+
T Consensus       502 ~~~~~Ydf~arNs~ELsV~k~E~LEvl~d~R~WW~~kn~~G~~GyvP~n  550 (721)
T KOG3557|consen  502 WVLVLYDFQARNSSELSVKKGEVLEVLDDGRKWWKVKNGHGRAGYVPSN  550 (721)
T ss_pred             eeeeehhhhcccchhhhhhhhhhhhhhhccccceeccCccCCCCCcchh
Confidence            788999999999999999999999999999999999886 889999875

>COG3103 SH3 domain protein [Signal transduction mechanisms]

Probab=94.61  E-value=0.055  Score=48.12  Aligned_cols=103  Identities=21%  Similarity=0.341  Sum_probs=68.4

Q ss_pred             CCCCCCEEEEeeeecCCCCeEEEEe-eCceeeecccceeecCCCCCCCCCCCCCCCCccccccccCCCCcCCCCCCCccc
Q psy7077         187 SFQPGDIIMVPVKQNAEPGWLAGEL-RGQTGWFPESYVEPCDETGEVVPGTELPGDKHHLELIAEVPENISDSGGSGIAV  265 (336)
Q Consensus       187 s~~~Gdii~v~~~~~~~~gW~~g~~-~g~~G~fP~~yve~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~  265 (336)
                      ++++|+.+.|+. .+...||...+. +|+.||||..++..-+......+.....        +...+.      .++   
T Consensus        49 ~i~~Ge~vtvl~-~~~~~~~~qI~~~~g~t~wi~~~~lt~e~s~~~~~p~~~~n--------Vr~~t~------t~~---  110 (205)
T COG3103          49 SIKAGEKVTVLG-TDGNTGYYQIRDSSGRTGWILSKNLTSEPSSNERVPDLELN--------VRELTK------TLS---  110 (205)
T ss_pred             EecCCcEEEEEE-EcCcccEEEEEecCCceEEEechhhccccccceecCchhhh--------hhhccc------chh---
Confidence            578999999973 345557999986 6899999999987644221111111100        000000      000   


Q ss_pred             cCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeec
Q psy7077         266 EEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPC  316 (336)
Q Consensus       266 ~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i  316 (336)
                             ....  .++.|..+++..+...+|.....+|+.|++=.-|+..-
T Consensus       111 -------~v~g--~~~~~t~~~~~sk~~~~w~~~~~~~k~~~vs~q~~~~~  152 (205)
T COG3103         111 -------NVDG--TWKQGTAVMQISKTQNNWYIITLKGKNGYVSGQLVTAQ  152 (205)
T ss_pred             -------hhhh--hhhcCcEEEEEeeccccchhhhhhcccchhhhhheecc
Confidence                   0001  18899999999999999999999999999999887644

>KOG0609|consensus

Probab=94.58  E-value=0.022  Score=56.82  Aligned_cols=48  Identities=17%  Similarity=0.465  Sum_probs=39.8

Q ss_pred             EEEEecccCCCCCCC-------ccccCCCEEEEEee-cCCceecccC-----CCccccccc
Q psy7077         119 YYIAAYPYDSTEPGD-------LTFNQDEVIYVTKK-ENDWWTGTIG-----DRTARFRGV  166 (336)
Q Consensus       119 ~~~al~dy~~~~~~e-------Ls~~~Gd~i~v~~~-~~~Ww~g~~~-----~~~g~~p~~  166 (336)
                      +.+|+|||.+.+++-       |+|++||++.|+++ |.+||.+...     +..|..|+.
T Consensus       216 ~vra~FdYdP~~D~~IPCkEagl~F~~GDILqIv~qdD~nWWQA~~~~~~~~~~AGLiPS~  276 (542)
T KOG0609|consen  216 FVRALFDYDPKEDDLIPCKEAGLPFQRGDILQIVSQDDPNWWQARRVGDPFGGLAGLIPSK  276 (542)
T ss_pred             eehhhcCcCcccCCcccchhcCCcccccceeeeccCCCcchhhhhcccCccccccccccCH
Confidence            788999999998874       48999999999999 9999998654     345777764

>KOG0609|consensus

Probab=94.55  E-value=0.013  Score=58.39  Aligned_cols=54  Identities=24%  Similarity=0.558  Sum_probs=43.4

Q ss_pred             eeeeeeeecccCCC-------CCCCCCCCCEEEEeeeecCCCCeEEEEee-----Cceeeecccceee
Q psy7077         170 RRYRAIYEFVSRNG-------DELSFQPGDIIMVPVKQNAEPGWLAGELR-----GQTGWFPESYVEP  225 (336)
Q Consensus       170 ~~~~al~df~a~~~-------~eLs~~~Gdii~v~~~~~~~~gW~~g~~~-----g~~G~fP~~yve~  225 (336)
                      ..++|+|||++...       -.|+|++||++.|  ..++|..||.++.-     +..|++|+..++.
T Consensus       215 ~~vra~FdYdP~~D~~IPCkEagl~F~~GDILqI--v~qdD~nWWQA~~~~~~~~~~AGLiPS~~~qe  280 (542)
T KOG0609|consen  215 VFVRALFDYDPKEDDLIPCKEAGLPFQRGDILQI--VSQDDPNWWQARRVGDPFGGLAGLIPSKELQE  280 (542)
T ss_pred             eeehhhcCcCcccCCcccchhcCCcccccceeee--ccCCCcchhhhhcccCccccccccccCHHHHH
Confidence            56889999998644       4689999999999  46789999998753     4579999977654

>KOG0197|consensus

Probab=94.54  E-value=0.025  Score=56.20  Aligned_cols=49  Identities=24%  Similarity=0.557  Sum_probs=41.7

Q ss_pred             cEEEEecccCCCCCCCccccCCCE-EEEEee-cCCceecccC--CCccccccc
Q psy7077         118 KYYIAAYPYDSTEPGDLTFNQDEV-IYVTKK-ENDWWTGTIG--DRTARFRGV  166 (336)
Q Consensus       118 ~~~~al~dy~~~~~~eLs~~~Gd~-i~v~~~-~~~Ww~g~~~--~~~g~~p~~  166 (336)
                      ..++|+|+|.+..++||+|.+||+ ..+.+. +.+||+.+..  +..|.+|++
T Consensus        12 ~~~valyd~~s~~~~dLsf~~Gd~~~~~~~~~~~~Ww~ar~~~~~~~g~ip~N   64 (468)
T KOG0197|consen   12 TIVVALYDYASRTPEDLSFRKGDVVLILLETTNGDWWRARSLQLGQEGYIPSN   64 (468)
T ss_pred             ceEEEeccccCCCccccccccCceEEEeeccCChhHHHHHHhhcCCCCcCcCc
Confidence            379999999999999999999999 566666 7999998764  777888876

>KOG3565|consensus

Probab=93.64  E-value=0.019  Score=59.49  Aligned_cols=58  Identities=29%  Similarity=0.694  Sum_probs=51.0

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEE--eeCceeeecccceeecC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE--LRGQTGWFPESYVEPCD  227 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~--~~g~~G~fP~~yve~~~  227 (336)
                      ...+.|+|.|.+++++++++.+|+++.+++ .+..+||-+++  .+|..|.||.+|++...
T Consensus       578 ~~~~~a~~~~~~~s~~~~si~~~~il~~ie-~~~g~gwt~~r~~~~~~~g~~Ptsyl~~~~  637 (640)
T KOG3565|consen  578 IRTSKALYAFEGQSEGTISIDPGEILQVIE-EDKGDGWTRGRLEPNGEKGYVPTSYLDVTE  637 (640)
T ss_pred             ccceecccCcCCCCCCccccCcchhHHHHh-hcccCCCCCCCCCCCCcCCCCCcccccccc
Confidence            356889999999999999999999999975 46778999998  68999999999998754

>PRK10884 SH3 domain-containing protein; Provisional

Probab=93.42  E-value=0.081  Score=47.23  Aligned_cols=38  Identities=18%  Similarity=0.353  Sum_probs=32.5

Q ss_pred             CCCCCEEEEEeecC-CCeEEEE-eCCceeEeeCCCeeecC
Q psy7077         280 MGLGTVVPVKQNAE-PGWLAGE-LRGQTGWFPESYVEPCD  317 (336)
Q Consensus       280 f~~Gd~V~V~~~~~-~~W~~g~-~~G~~G~fPsnyV~~i~  317 (336)
                      +..|+.|+|++..+ ++|...+ .+|++||+++.|+....
T Consensus        50 l~~G~~v~vl~~~~~~~w~~Vr~~~G~~GWV~~~~Ls~~p   89 (206)
T PRK10884         50 LNAGEEVTLLQVNANTNYAQIRDSKGRTAWIPLKQLSTTP   89 (206)
T ss_pred             EcCCCEEEEEEEcCCCCEEEEEeCCCCEEeEEHHHhcCCc
Confidence            78999999998876 6898886 58999999999997543

>PF08239 SH3_3: Bacterial SH3 domain; InterPro: IPR013247 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]

Probab=92.84  E-value=0.17  Score=34.72  Aligned_cols=37  Identities=24%  Similarity=0.606  Sum_probs=27.1

Q ss_pred             CCCCCCEEEEeeeecCCCCeEEE-EeeCceeeeccccee
Q psy7077         187 SFQPGDIIMVPVKQNAEPGWLAG-ELRGQTGWFPESYVE  224 (336)
Q Consensus       187 s~~~Gdii~v~~~~~~~~gW~~g-~~~g~~G~fP~~yve  224 (336)
                      .+..|+.|.++.. ..+.+|++. ..+|..||++..||+
T Consensus        18 ~l~~g~~v~v~~~-~~~~~W~~V~~~~g~~GwV~~~~l~   55 (55)
T PF08239_consen   18 QLPKGEKVTVLGE-SGDGNWYKVRTYDGKTGWVSSSYLS   55 (55)
T ss_dssp             EEETTSEEEEEEE-ETT--EEEEEEETTEEEEEEGGCEE
T ss_pred             EEeCCCEEEEEEE-cCCcEEEEEECcCCcEEEEEccccC
Confidence            3578899999643 233339999 468899999999985

They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. A homologue of the SH3 domain has been found in a number of different bacterial proteins including glycyl-glycine endopeptidase, bacteriocin and some hypothetical proteins.; PDB: 3PVQ_B 3NPF_B 3H41_A 2KQ8_A 2KRS_A 2KYB_A 2KT8_A.

>PF06347 SH3_4: Bacterial SH3 domain; InterPro: IPR010466 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]

Probab=92.41  E-value=0.27  Score=33.93  Aligned_cols=33  Identities=30%  Similarity=0.577  Sum_probs=28.2

Q ss_pred             CCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCe
Q psy7077         280 MGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYV  313 (336)
Q Consensus       280 f~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV  313 (336)
                      ++.|..+.|.+. .++|...+.+|.+||++.+.|
T Consensus        21 l~~g~~v~v~~~-~~~W~~V~~~g~~GWv~~~~l   53 (55)
T PF06347_consen   21 LEPGVPVRVIEC-RGGWCKVRADGRTGWVHKSLL   53 (55)
T ss_pred             ECCCCEEEEEEc-cCCeEEEEECCeEEeEEeeec
Confidence            788999999955 567888889999999998765

They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. This family consists of several hypothetical bacterial proteins of unknown function, but that contain an SH-3 region.

>KOG0199|consensus

Probab=92.30  E-value=0.13  Score=53.32  Aligned_cols=47  Identities=28%  Similarity=0.435  Sum_probs=38.2

Q ss_pred             EEEecccCCCCCCCccccCCCEEEEEee--cCCceecccC--CCccccccc
Q psy7077         120 YIAAYPYDSTEPGDLTFNQDEVIYVTKK--ENDWWTGTIG--DRTARFRGV  166 (336)
Q Consensus       120 ~~al~dy~~~~~~eLs~~~Gd~i~v~~~--~~~Ww~g~~~--~~~g~~p~~  166 (336)
                      .+|..+|+..+++-|-|++||.|.|++.  .+.||+|.+.  ++.|.||..
T Consensus       377 ~~a~~~~d~~ep~aLh~~kgD~IvVIegs~a~y~WfgQn~Rn~kvG~Fprs  427 (1039)
T KOG0199|consen  377 AVARETYDSIEPGALHLTKGDEIVVIEGSGAGYDWFGQNKRNQKVGTFPRS  427 (1039)
T ss_pred             ceeeeeccccCCCceeeccCCeEEEEecCCccceeeccccccceecccCcc
Confidence            3444566778899999999999999998  5689999764  678999864

>KOG3565|consensus

Probab=91.91  E-value=0.067  Score=55.50  Aligned_cols=41  Identities=24%  Similarity=0.620  Sum_probs=36.0

Q ss_pred             CCCCCCCCEEEEEeec-CCCeEEEE--eCCceeEeeCCCeeecC
Q psy7077         277 SPIMGLGTVVPVKQNA-EPGWLAGE--LRGQTGWFPESYVEPCD  317 (336)
Q Consensus       277 ~Lsf~~Gd~V~V~~~~-~~~W~~g~--~~G~~G~fPsnyV~~i~  317 (336)
                      +++..+|+++.|++.+ ++||.+++  .+|..|.||.+||+.+.
T Consensus       594 ~~si~~~~il~~ie~~~g~gwt~~r~~~~~~~g~~Ptsyl~~~~  637 (640)
T KOG3565|consen  594 TISIDPGEILQVIEEDKGDGWTRGRLEPNGEKGYVPTSYLDVTE  637 (640)
T ss_pred             ccccCcchhHHHHhhcccCCCCCCCCCCCCcCCCCCcccccccc
Confidence            4779999999998765 78999998  79999999999998664

>KOG0199|consensus

Probab=91.71  E-value=0.21  Score=51.86  Aligned_cols=38  Identities=21%  Similarity=0.179  Sum_probs=31.5

Q ss_pred             CCCCCCCEEEEEeecC-CCeEEE--EeCCceeEeeCCCeee
Q psy7077         278 PIMGLGTVVPVKQNAE-PGWLAG--ELRGQTGWFPESYVEP  315 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~-~~W~~g--~~~G~~G~fPsnyV~~  315 (336)
                      |.|++||.|+|++... +.||.|  ..++++|.||.+-|..
T Consensus       391 Lh~~kgD~IvVIegs~a~y~WfgQn~Rn~kvG~Fprsvvt~  431 (1039)
T KOG0199|consen  391 LHLTKGDEIVVIEGSGAGYDWFGQNKRNQKVGTFPRSVVTA  431 (1039)
T ss_pred             eeeccCCeEEEEecCCccceeeccccccceecccCcceeee
Confidence            7799999999998875 456666  3589999999999983

>COG3103 SH3 domain protein [Signal transduction mechanisms]

Probab=91.16  E-value=0.3  Score=43.48  Aligned_cols=42  Identities=21%  Similarity=0.340  Sum_probs=35.1

Q ss_pred             CCCCCEEEEEeecCC-CeEEEEe-CCceeEeeCCCeeecCCCCC
Q psy7077         280 MGLGTVVPVKQNAEP-GWLAGEL-RGQTGWFPESYVEPCDETGE  321 (336)
Q Consensus       280 f~~Gd~V~V~~~~~~-~W~~g~~-~G~~G~fPsnyV~~i~~~~~  321 (336)
                      +++||.|+|+...+. +|...+. +|+.||||+.++..-+..++
T Consensus        50 i~~Ge~vtvl~~~~~~~~~qI~~~~g~t~wi~~~~lt~e~s~~~   93 (205)
T COG3103          50 IKAGEKVTVLGTDGNTGYYQIRDSSGRTGWILSKNLTSEPSSNE   93 (205)
T ss_pred             ecCCcEEEEEEEcCcccEEEEEecCCceEEEechhhccccccce
Confidence            899999999999887 7888765 79999999999986655433

>PF14603 hSH3: Helically-extended SH3 domain; PDB: 1RI9_A

Probab=90.27  E-value=0.29  Score=37.26  Aligned_cols=40  Identities=23%  Similarity=0.272  Sum_probs=25.8

Q ss_pred             CCCCCCCEEEEEeecCC-CeEEEEeCCceeEeeCCCeeecC
Q psy7077         278 PIMGLGTVVPVKQNAEP-GWLAGELRGQTGWFPESYVEPCD  317 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~-~W~~g~~~G~~G~fPsnyV~~i~  317 (336)
                      |.+.+|+++.|++..++ -|.+....|+-|++|.+++-..+
T Consensus        33 Lpi~~GE~LeVI~~t~~~kvlCRN~~GKYGYV~~~~L~~~d   73 (89)
T PF14603_consen   33 LPIKPGEILEVIQFTDDNKVLCRNSEGKYGYVLRSHLLPLD   73 (89)
T ss_dssp             ----TT-B-EEEEESSSSEEEEEETTTEEEEEEGGGS----
T ss_pred             CCcCCCCEEEEEEeCCCCeEEEeCCCCceeEEEHHHccCCC
Confidence            66999999999988655 66667779999999999985543

>PF14603 hSH3: Helically-extended SH3 domain; PDB: 1RI9_A

Probab=90.11  E-value=0.4  Score=36.49  Aligned_cols=44  Identities=27%  Similarity=0.456  Sum_probs=27.9

Q ss_pred             CCCCCCCCCCCEEEEeeeecCCCCeEEEEe-eCceeeecccceeecC
Q psy7077         182 NGDELSFQPGDIIMVPVKQNAEPGWLAGEL-RGQTGWFPESYVEPCD  227 (336)
Q Consensus       182 ~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~-~g~~G~fP~~yve~~~  227 (336)
                      ..-+|.+.+|+++.|+  +..+.+-|.+++ .|+.|+||.+++-..+
T Consensus        29 G~kDLpi~~GE~LeVI--~~t~~~kvlCRN~~GKYGYV~~~~L~~~d   73 (89)
T PF14603_consen   29 GGKDLPIKPGEILEVI--QFTDDNKVLCRNSEGKYGYVLRSHLLPLD   73 (89)
T ss_dssp             -TTB----TT-B-EEE--EESSSSEEEEEETTTEEEEEEGGGS----
T ss_pred             CcccCCcCCCCEEEEE--EeCCCCeEEEeCCCCceeEEEHHHccCCC
Confidence            4679999999999995  456777888886 6999999999986544

>smart00287 SH3b Bacterial SH3 domain homologues

Probab=89.71  E-value=0.52  Score=33.06  Aligned_cols=36  Identities=25%  Similarity=0.415  Sum_probs=27.4

Q ss_pred             CCCCCCEEEEeeeecCCCCeEEEEee-Cceeeeccccee
Q psy7077         187 SFQPGDIIMVPVKQNAEPGWLAGELR-GQTGWFPESYVE  224 (336)
Q Consensus       187 s~~~Gdii~v~~~~~~~~gW~~g~~~-g~~G~fP~~yve  224 (336)
                      .+..|+.+.++.  ...++|+..+.. |..||+|..++.
T Consensus        26 ~l~~g~~v~i~~--~~~~~W~~v~~~~g~~Gwi~~~~~~   62 (63)
T smart00287       26 TLKKGDKVKVLG--VDGQDWAKITYGSGQRGYVPGYVVN   62 (63)
T ss_pred             EecCCCEEEEEE--ccCCceEEEEcCCCCEEEEEeeeec
Confidence            467899999853  233489999975 999999877653

>PRK10884 SH3 domain-containing protein; Provisional

Probab=88.42  E-value=0.52  Score=42.11  Aligned_cols=40  Identities=18%  Similarity=0.380  Sum_probs=31.4

Q ss_pred             CCCCCCEEEEeeeecCCCCeEEEEe-eCceeeecccceeecC
Q psy7077         187 SFQPGDIIMVPVKQNAEPGWLAGEL-RGQTGWFPESYVEPCD  227 (336)
Q Consensus       187 s~~~Gdii~v~~~~~~~~gW~~g~~-~g~~G~fP~~yve~~~  227 (336)
                      ++..|+.|.|+. ...+.+|.+.+. +|+.||++..|+....
T Consensus        49 ~l~~G~~v~vl~-~~~~~~w~~Vr~~~G~~GWV~~~~Ls~~p   89 (206)
T PRK10884         49 TLNAGEEVTLLQ-VNANTNYAQIRDSKGRTAWIPLKQLSTTP   89 (206)
T ss_pred             EEcCCCEEEEEE-EcCCCCEEEEEeCCCCEEeEEHHHhcCCc
Confidence            467899999964 234468999985 7999999999997644

>PRK13914 invasion associated secreted endopeptidase; Provisional

Probab=88.25  E-value=0.76  Score=46.00  Aligned_cols=44  Identities=25%  Similarity=0.397  Sum_probs=35.7

Q ss_pred             CCCCCEEEEEeecCCCeEEEEeC-CceeEeeCCCeeecCCCCCCC
Q psy7077         280 MGLGTVVPVKQNAEPGWLAGELR-GQTGWFPESYVEPCDETGEVV  323 (336)
Q Consensus       280 f~~Gd~V~V~~~~~~~W~~g~~~-G~~G~fPsnyV~~i~~~~~~~  323 (336)
                      +..|+.|.|+...+.+|+..+.+ |+.||+=+.||..-....++.
T Consensus       105 l~~G~~V~Vl~~~~ngW~kI~~~~GktGwV~~~YLs~~~~~~~~~  149 (481)
T PRK13914        105 IKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTDKVTSTPVA  149 (481)
T ss_pred             ecCCCEEEEeecccCCeEEEEcCCCCEEEEecccccCCCccCccc
Confidence            88999999987667789999884 999999999998654444444

>PF06347 SH3_4: Bacterial SH3 domain; InterPro: IPR010466 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]

Probab=87.60  E-value=0.86  Score=31.34  Aligned_cols=35  Identities=29%  Similarity=0.605  Sum_probs=28.3

Q ss_pred             CCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccce
Q psy7077         186 LSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYV  223 (336)
Q Consensus       186 Ls~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yv  223 (336)
                      ..+.+|..+.+.   ....+|.+.+.+|..||++.+.|
T Consensus        19 ~~l~~g~~v~v~---~~~~~W~~V~~~g~~GWv~~~~l   53 (55)
T PF06347_consen   19 ARLEPGVPVRVI---ECRGGWCKVRADGRTGWVHKSLL   53 (55)
T ss_pred             EEECCCCEEEEE---EccCCeEEEEECCeEEeEEeeec
Confidence            356788888884   35778999999999999998765

They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. This family consists of several hypothetical bacterial proteins of unknown function, but that contain an SH-3 region.

>KOG3705|consensus

Probab=86.76  E-value=0.78  Score=44.49  Aligned_cols=55  Identities=24%  Similarity=0.323  Sum_probs=43.4

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe--eCceeeecccceee
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL--RGQTGWFPESYVEP  225 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~--~g~~G~fP~~yve~  225 (336)
                      ....+++++..++..+|+.++.||+|.|-  ....+|.-.|.+  .++.|+||+--|++
T Consensus       509 AHn~ivi~aH~prt~~ei~l~vGD~vgvA--GNHWdGySKG~Nr~t~~~GlfPSyKvre  565 (580)
T KOG3705|consen  509 AHNVIVIEAHIPRTNKEIDLKVGDKVGVA--GNHWDGYSKGTNRQTYKEGLFPSYKVRE  565 (580)
T ss_pred             ccceEEEEecCCCcccccCcccCCeeeec--ccccccccccccccccccCCCccceeee
Confidence            45678999999999999999999999983  334555556654  47899999977765

>KOG0040|consensus

Probab=85.09  E-value=0.033  Score=61.23  Aligned_cols=58  Identities=21%  Similarity=0.529  Sum_probs=50.7

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCCC
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  229 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~~  229 (336)
                      .++.|+|+|...++.+.+.++||+++.+  ....-.||.++++.+.|++|+.||+.+.+.
T Consensus       969 ~~v~alyd~q~kSprev~mKkgDvltll--~s~nkdwwkve~~d~qg~vpa~yvk~~~~~ 1026 (2399)
T KOG0040|consen  969 ECVLALYDYQEKSPREVTMKKGDVLTLL--NSINKDWWKVEVNDRQGFVPAAYVKRLDPG 1026 (2399)
T ss_pred             HHHHHHHHHHhcCHHHHHHhhhhHHHHH--hhcccccccchhhhhcCcchHHHHHHhccC
Confidence            3467999999999999999999998774  346678999999999999999999998855

>KOG3812|consensus

Probab=81.96  E-value=0.92  Score=43.07  Aligned_cols=46  Identities=24%  Similarity=0.593  Sum_probs=34.7

Q ss_pred             EEEecccCCCCCCC-------ccccCCCEEEEEee-cCCceeccc---CCCcccccc
Q psy7077         120 YIAAYPYDSTEPGD-------LTFNQDEVIYVTKK-ENDWWTGTI---GDRTARFRG  165 (336)
Q Consensus       120 ~~al~dy~~~~~~e-------Ls~~~Gd~i~v~~~-~~~Ww~g~~---~~~~g~~p~  165 (336)
                      +++.-+|.+.-++|       ++|...|.+.|.++ +++||.|+.   ++..|++|.
T Consensus        61 V~tnv~Y~gslde~~Pv~g~aisF~~kDFlHIkeKynnDWWIGRlVkeg~e~gFiPs  117 (475)
T KOG3812|consen   61 VRTNVSYDGSLDEDSPVQGHAISFEAKDFLHIKEKYNNDWWIGRLVKEGCEIGFIPS  117 (475)
T ss_pred             EEeccccCCccCCCCCCCCceeeeccccceeehhhcccchhHHHHhhcCCccccccc
Confidence            34455788776654       58999999999999 999999975   345577664

>KOG3812|consensus

Probab=80.57  E-value=0.42  Score=45.28  Aligned_cols=34  Identities=18%  Similarity=0.421  Sum_probs=29.5

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEe---CCceeEeeCC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGEL---RGQTGWFPES  311 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~---~G~~G~fPsn  311 (336)
                      .+|+.-|.+.|.++.++.||.|++   ++..|++|+-
T Consensus        82 isF~~kDFlHIkeKynnDWWIGRlVkeg~e~gFiPsp  118 (475)
T KOG3812|consen   82 ISFEAKDFLHIKEKYNNDWWIGRLVKEGCEIGFIPSP  118 (475)
T ss_pred             eeeccccceeehhhcccchhHHHHhhcCCccccccch
Confidence            679999999999998888888864   7899999973

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	336
1uff_A	93	Solution Structure Of The First Sh3 Domain Of Human		2e-12
1uhf_A	69	Solution Structure Of The Third Sh3 Domain Of Human		7e-11
2kbt_A	142	Attachment Of An Nmr-Invisible Solubility Enhanceme		1e-07
1zsg_A	65	Beta Pix-Sh3 Complexed With An Atypical Peptide Fro		2e-07
2drk_A	59	Acanthamoeba Myosin I Sh3 Domain Bound To Acan125 L		4e-07
2drm_A	58	Acanthamoeba Myosin I Sh3 Domain Bound To Acan125 L		4e-07
3jv3_A	283	Structure Of Sh3e-Dh Unit Of Murine Intersectin-1l		5e-07
2dm1_A	73	Solution Structure Of The Second Sh3 Domain Of Huma		7e-07
2yuo_A	78	Solution Structure Of The Sh3 Domain Of Mouse Run A		1e-06
2yun_A	79	Solution Structure Of The Sh3 Domain Of Human Nostr		2e-06
2ak5_A	64	Beta Pix-Sh3 Complexed With A Cbl-B Peptide Length		3e-06
2df6_A	59	Crystal Structure Of The Sh3 Domain Of Betapix In C		3e-06
2esw_A	61	Atomic Structure Of The N-Terminal Sh3 Domain Of Mo		3e-06
1uec_A	193	Crystal Structure Of Autoinhibited Form Of Tandem S		4e-06
1ugv_A	72	Solution Structure Of The Sh3 Domain Of Human Olygo		4e-06
2jte_A	64	Third Sh3 Domain Of Cd2ap Length = 64		4e-06
3i35_A	60	Human Sh3 Domain Of Protein Lasp1 Length = 60		6e-06
1ng2_A	193	Structure Of Autoinhibited P47phox Length = 193		6e-06
1wlp_B	138	Solution Structure Of The P22phox-P47phox Complex L		6e-06
3gf9_A	295	Crystal Structure Of Human Intersectin 2 Rhogef Dom		6e-06
1ujy_A	76	Solution Structure Of Sh3 Domain In RacCDC42 GUANIN		7e-06
1ov3_A	138	Structure Of The P22phox-P47phox Complex Length = 1		1e-05
2dil_A	69	Solution Structure Of The Sh3 Domain Of The Human P		1e-05
2d8h_A	80	Solution Structure Of The Sh3 Domain Of Hypothetica		1e-05
1udl_A	98	The Solution Structure Of The Fifth Sh3 Domain Of I		1e-05
1gcq_A	61	Crystal Structure Of Vav And Grb2 Sh3 Domains Lengt		2e-05
1io6_A	59	Growth Factor Receptor-Bound Protein 2 (Grb2) C-Ter		2e-05
3u23_A	65	Atomic Resolution Crystal Structure Of The 2nd Sh3		2e-05
4f14_A	64	Structure Of The Sh3 Domain Of Human Nebulette In C		2e-05
2ed0_A	78	Solution Structure Of The Sh3 Domain Of Abl Interac		2e-05
1gri_A	217	Grb2 Length = 217		2e-05
2vvk_A	56	Grb2 Sh3c (1) Length = 56		2e-05
1w6x_A	60	Sh3 Domain Of P40phox, Component Of The Nadph Oxida		3e-05
3iql_A	71	Crystal Structure Of The Rat Endophilin-A1 Sh3 Doma		4e-05
2ydl_A	69	Crystal Structure Of Sh3c From Cin85 Length = 69		4e-05
1h3h_A	60	Structural Basis For Specific Recognition Of An Rxx		4e-05
4iim_A	70	Crystal Structure Of The Second Sh3 Domain Of Itsn1		4e-05
1uti_A	58	MonaGADS SH3C IN COMPLEX WITH HPK DERIVED PEPTIDE L		4e-05
2l0a_A	72	Solution Nmr Structure Of Signal Transducing Adapte		5e-05
1z9q_A	79	Solution Structure Of Sh3 Domain Of P40phox Length		5e-05
1k4u_S	62	Solution Structure Of The C-Terminal Sh3 Domain Of		5e-05
2lj0_A	65	The Third Sh3 Domain Of R85fl Length = 65		5e-05
2da9_A	70	Solution Structure Of The Third Sh3 Domain Of Sh3-D		5e-05
2k9g_A	73	Solution Structure Of The Third Sh3 Domain Of The C		6e-05
2k6d_A	62	Cin85 Sh3-C Domain In Complex With Ubiquitin Length		6e-05
1ark_A	60	Sh3 Domain From Human Nebulin, Nmr, 15 Structures L		6e-05
1oeb_A	62	MonaGADS SH3C DOMAIN Length = 62		6e-05
2lj1_A	64	The Third Sh3 Domain Of R85fl With Ataxin-7 Prr Len		6e-05
3haj_A	486	Crystal Structure Of Human Pacsin2 F-Bar Domain (P2		6e-05
2a28_A	54	Atomic-Resolution Crystal Structure Of The Second S		7e-05
2fei_A	65	Solution Structure Of The Second Sh3 Domain Of Huma		7e-05
2dyb_A	341	The Crystal Structure Of Human P40(Phox) Length = 3		7e-05
2xmf_A	60	Myosin 1e Sh3 Length = 60		7e-05
2d0n_A	59	Crystal Structure Of The C-Terminal Sh3 Domain Of T		1e-04
4glm_A	72	Crystal Structure Of The Sh3 Domain Of Dnmbp Protei		1e-04
3c0c_A	73	X-Ray Crystal Structure Of The Rat Endophilin A2 Sh		1e-04
2vwf_A	58	Grb2 Sh3c (2) Length = 58		1e-04
2dbm_A	73	Solution Structures Of The Sh3 Domain Of Human Sh3-		1e-04
1oot_A	60	Crystal Structure Of The Sh3 Domain From A S. Cerev		1e-04
4gbq_A	74	Solution Nmr Structure Of The Grb2 N-Terminal Sh3 D		2e-04
2krm_A	57	Rdc Refined Solution Structure Of The First Sh3 Dom		2e-04
2x3w_D	60	Structure Of Mouse Syndapin I (Crystal Form 2) Leng		2e-04
1wi7_A	68	Solution Structure Of The Sh3 Domain Of Sh3-Domain		2e-04
2j6f_A	62	N-Terminal Sh3 Domain Of Cms (Cd2ap Human Homolog)		3e-04
1zlm_A	58	Crystal Structure Of The Sh3 Domain Of Human Osteoc		3e-04
1k76_A	62	Solution Structure Of The C-Terminal Sem-5 Sh3 Doma		3e-04
1j3t_A	74	Solution Structure Of The Second Sh3 Domain Of Huma		3e-04
1x2k_A	68	Solution Structure Of The Sh3 Domain Of Human Osteo		4e-04
3ehq_A	222	Crystal Structure Of Human Osteoclast Stimulating F		4e-04
2a08_A	60	Structure Of The Yeast Yhh6 Sh3 Domain Length = 60		5e-04
2ew3_A	68	Solution Structure Of The Sh3 Domain Of Human Sh3gl		5e-04
3sem_A	60	Sem5 Sh3 Domain Complexed With Peptoid Inhibitor Le		6e-04
1sem_A	58	Structural Determinants Of Peptide-Binding Orientat		7e-04
1aze_A	56	Nmr Structure Of The Complex Between The C32s-Y7v M		7e-04
1x6b_A	79	Solution Structures Of The Sh3 Domain Of Human Rho		8e-04
4hxj_A	60	Crystal Structure Of Sh3:rgt Complex Length = 60		8e-04
2e5k_A	94	Solution Structure Of Sh3 Domain In Suppressor Of T		9e-04

>pdb|1UFF|A Chain A, Solution Structure Of The First Sh3 Domain Of Human Intersectin2 (Kiaa1256) Length = 93

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/71 (50%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 165 GVSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           G S    YRA+Y F +RN DE+SF  GDII V  K   EPGWL G  +G  GWFP +YVE
Sbjct: 1   GSSGSSGYRALYPFEARNHDEMSFNSGDIIQVDEKTVGEPGWLYGSFQGNFGWFPCNYVE 60
Query: 225 --PCDETGEVV 233
             P  E  + V
Sbjct: 61  KMPSSENEKAV 71

>pdb|1UHF|A Chain A, Solution Structure Of The Third Sh3 Domain Of Human Intersectin 2(Kiaa1256) Length = 69

Iteration: 1
 Score = 64.7 bits (156), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 28/44 (63%), Positives = 34/44 (77%)
Query: 120 YIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGTIGDRTARF 163
           YIA YPY S EPGDLTF + E I VT+K+ +WWTG+IGDR+  F
Sbjct: 11  YIALYPYSSVEPGDLTFTEGEEILVTQKDGEWWTGSIGDRSGIF 54

>pdb|2KBT|A Chain A, Attachment Of An Nmr-Invisible Solubility Enhancement Tag (Inset) Using A Sortase-Mediated Protein Ligation Method Length = 142

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 23/52 (44%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           +A Y+F +R+  ELS + GDII + + +  + GW  GE+ G+ GWFP +YVE
Sbjct: 9   KARYDFCARDRSELSLKEGDIIKI-LNKKGQQGWWRGEIYGRIGWFPSNYVE 59

>pdb|1ZSG|A Chain A, Beta Pix-Sh3 Complexed With An Atypical Peptide From Alpha- Pak Length = 65

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/51 (50%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYV 223
           RA + F   N DELSF  GD+I V   +  E GW  G L G+TGWFP +YV
Sbjct: 12  RAKFNFQQTNEDELSFSKGDVIHV--TRVEEGGWWEGTLNGRTGWFPSNYV 60

>pdb|2DRK|A Chain A, Acanthamoeba Myosin I Sh3 Domain Bound To Acan125 Length = 59

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           +A+Y++ ++ GDEL+F+ GD I+V  K  A  GW  GEL G+ GW P +YV+
Sbjct: 8   KALYDYDAQTGDELTFKEGDTIIVHQKDPA--GWWEGELNGKRGWVPANYVQ 57

>pdb|2DRM|A Chain A, Acanthamoeba Myosin I Sh3 Domain Bound To Acan125 Length = 58

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           +A+Y++ ++ GDEL+F+ GD I+V  K  A  GW  GEL G+ GW P +YV+
Sbjct: 7   KALYDYDAQTGDELTFKEGDTIIVHQKDPA--GWWEGELNGKRGWVPANYVQ 56

>pdb|3JV3|A Chain A, Structure Of Sh3e-Dh Unit Of Murine Intersectin-1l Length = 283

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 175 IYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVP 234
           +Y++ ++N DEL+F  G II V  K++  P W  GE+ GQ G FP +YV+    T ++ P
Sbjct: 8   MYDYTAQNDDELAFSKGQIINVLNKED--PDWWKGEVSGQVGLFPSNYVKL---TTDMDP 62
Query: 235 GTELPGDKHHLELIA 249
             +   D H L+++ 
Sbjct: 63  SQQWCSDLHLLDMLT 77

>pdb|2DM1|A Chain A, Solution Structure Of The Second Sh3 Domain Of Human Protein Vav-2 Length = 73

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 174 AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           A Y F +R+  ELS + GD++ +  +   + GW  GE  G+ GWFP +YVE
Sbjct: 12  ARYNFAARDMRELSLREGDVVRIYSRIGGDQGWWKGETNGRIGWFPSTYVE 62

>pdb|2YUO|A Chain A, Solution Structure Of The Sh3 Domain Of Mouse Run And Tbc1 Domain Containing 3 Length = 78

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC 226
           S  RR +A+ +F   + DEL F+  DII + + Q  E  W+ GEL G  GWFP  +VE  
Sbjct: 5   SSGRRAKALLDFERHDDDELGFRKNDIITI-ISQKDEHCWV-GELNGLRGWFPAKFVEVL 62
Query: 227 DE 228
           DE
Sbjct: 63  DE 64

>pdb|2YUN|A Chain A, Solution Structure Of The Sh3 Domain Of Human Nostrin Length = 79

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           S  R  +A+Y F +R  DEL+ + GDI+++  K+  E GW  G L G+ G FP +YVE
Sbjct: 5   SSGRLCKALYSFQARQDDELNLEKGDIVIIHEKK--EEGWWFGSLNGKKGHFPAAYVE 60

>pdb|2AK5|A Chain A, Beta Pix-Sh3 Complexed With A Cbl-B Peptide Length = 64

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/51 (49%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYV 223
           RA + F   N DELSF  GD+I V   +  E GW  G   G+TGWFP +YV
Sbjct: 10  RAKFNFQQTNEDELSFSKGDVIHV--TRVEEGGWWEGTHNGRTGWFPSNYV 58

>pdb|2DF6|A Chain A, Crystal Structure Of The Sh3 Domain Of Betapix In Complex With A High Affinity Peptide From Pak2 Length = 59

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYV 223
           RA + F   N DELSF  GD+I V   +  E GW  G   G+TGWFP +YV
Sbjct: 8   RAKFNFQQTNEDELSFSKGDVIHVTRVE--EGGWWEGTHNGRTGWFPSNYV 56

>pdb|2ESW|A Chain A, Atomic Structure Of The N-Terminal Sh3 Domain Of Mouse Beta Pix,P21-Activated Kinase (Pak)-Interacting Exchange Factor Length = 61

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYV 223
           RA + F   N DELSF  GD+I V   +  E GW  G   G+TGWFP +YV
Sbjct: 10  RAKFNFQQTNEDELSFSKGDVIHVTRVE--EGGWWEGTHNGRTGWFPSNYV 58

>pdb|1UEC|A Chain A, Crystal Structure Of Autoinhibited Form Of Tandem Sh3 Domain Of P47phox Length = 193

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 22/143 (15%)
Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGE 231
           YRAI ++   +G E++   GD+  V V + +E GW   +++ + GW P S++EP D   E
Sbjct: 14  YRAIADYEKTSGSEMALSTGDV--VEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDE 71
Query: 232 VVPGTELPGDKHHLELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQN 291
               TE P   +              +G   +A++    +  D  S +   G  V V   
Sbjct: 72  ----TEDPEPNY--------------AGEPYVAIKAYTAVEGDEVSLLE--GEAVEVIHK 111
Query: 292 AEPGWLAGELRGQTGWFPESYVE 314
              GW        TG+FP  Y++
Sbjct: 112 LLDGWWVIRKDDVTGYFPSMYLQ 134

>pdb|1UGV|A Chain A, Solution Structure Of The Sh3 Domain Of Human Olygophrein-1 Like Protein (Kiaa0621) Length = 72

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           +R+ +A+Y   + +  ELSF  G  +   V  + EPGWL G L G+TG  PE+YVE
Sbjct: 10  FRKAKALYACKAEHDSELSFTAG-TVFDNVHPSQEPGWLEGTLNGKTGLIPENYVE 64

>pdb|2JTE|A Chain A, Third Sh3 Domain Of Cd2ap Length = 64

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 165 GVSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYV 223
           G  EY   R ++ +   N DEL+F+ G+II +  K+  E GW  GEL G+ G FP+++ 
Sbjct: 4   GAKEY--CRTLFPYTGTNEDELTFREGEIIHLISKETGEAGWWKGELNGKEGVFPDNFA 60

>pdb|3I35|A Chain A, Human Sh3 Domain Of Protein Lasp1 Length = 60

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/57 (47%), Positives = 38/57 (66%), Gaps = 4/57 (7%)
Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAG--ELRGQTGWFPESYVE 224
           +RYRA+Y++ + + DE+SFQ GD I V V+Q  + GW+ G  E  G TG  P +YVE
Sbjct: 4   KRYRAVYDYSAADEDEVSFQDGDTI-VNVQQ-IDDGWMYGTVERTGDTGMLPANYVE 58

>pdb|1NG2|A Chain A, Structure Of Autoinhibited P47phox Length = 193

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 22/143 (15%)
Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGE 231
           YRAI ++   +G E++   GD+  V V + +E GW   +++ + GW P S++EP D   E
Sbjct: 14  YRAIADYEKTSGSEMALSTGDV--VEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDE 71
Query: 232 VVPGTELPGDKHHLELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQN 291
               TE P   +              +G   +A++    +  D  S +   G  V V   
Sbjct: 72  ----TEDPEPNY--------------AGEPYVAIKAYTAVEGDEVSLLE--GEAVEVIHK 111
Query: 292 AEPGWLAGELRGQTGWFPESYVE 314
              GW        TG+FP  Y++
Sbjct: 112 LLDGWWVIRKDDVTGYFPSMYLQ 134

>pdb|1WLP|B Chain B, Solution Structure Of The P22phox-P47phox Complex Length = 138

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 63/145 (43%), Gaps = 22/145 (15%)
Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET 229
           + YRAI ++   +G E++   GD+  V V + +E GW   +++ + GW P S++EP D  
Sbjct: 11  QTYRAIADYEKTSGSEMALSTGDV--VEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSP 68
Query: 230 GEVVPGTELPGDKHHLELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVK 289
            E    TE P   +              +G   +A++    +  D  S +   G  V V 
Sbjct: 69  DE----TEDPEPNY--------------AGEPYVAIKAYTAVEGDEVSLLE--GEAVEVI 108
Query: 290 QNAEPGWLAGELRGQTGWFPESYVE 314
                GW        TG+FP  Y++
Sbjct: 109 HKLLDGWWVIRKDDVTGYFPSMYLQ 133

>pdb|3GF9|A Chain A, Crystal Structure Of Human Intersectin 2 Rhogef Domain Length = 295

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 174 AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           A+Y++ + N DELSF  G +I V  K +  P W  GE+ G TG FP +YV+
Sbjct: 23  AMYDYAANNEDELSFSKGQLINVMNKDD--PDWWQGEINGVTGLFPSNYVK 71

>pdb|1UJY|A Chain A, Solution Structure Of Sh3 Domain In RacCDC42 GUANINE Nucleotide Exchange Factor(Gef) 6 Length = 76

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYV 223
           +A + F   N DELS   GDII V   +  E GW  G L G+TGWFP +YV
Sbjct: 14  KARFNFKQTNEDELSVCKGDIIYVT--RVEEGGWWEGTLNGRTGWFPSNYV 62

>pdb|1OV3|A Chain A, Structure Of The P22phox-P47phox Complex Length = 138

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 63/145 (43%), Gaps = 22/145 (15%)
Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET 229
           + YRAI ++   +G E++   GD+  V V + +E GW   +++ + GW P S++EP D  
Sbjct: 12  QTYRAIADYEKTSGSEMALSTGDV--VEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSP 69
Query: 230 GEVVPGTELPGDKHHLELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVK 289
            E    TE P   +              +G   +A++    +  D  S +   G  V V 
Sbjct: 70  DE----TEDPEPNY--------------AGEPYVAIKAYTAVEGDEVSLLE--GEAVEVI 109
Query: 290 QNAEPGWLAGELRGQTGWFPESYVE 314
                GW        TG+FP  Y++
Sbjct: 110 HKLLDGWWVIRKDDVTGYFPSMYLQ 134

>pdb|2DIL|A Chain A, Solution Structure Of The Sh3 Domain Of The Human Proline- Serine-Threonine Phosphatase-Interacting Protein 1 Length = 69

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 165 GVSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           G S  + YRA+Y++ ++N DEL    GDI+ V ++   E GW   E  GQ G+ P SY+E
Sbjct: 4   GSSGAQEYRALYDYTAQNPDELDLSAGDILEVILE--GEDGWWTVERNGQRGFVPGSYLE 61

>pdb|2D8H|A Chain A, Solution Structure Of The Sh3 Domain Of Hypothetical Protein Sh3yl1 Length = 80

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 174 AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYV 223
           A+Y F  +   +L+FQ GD I V  K ++   W  G+LRGQTG FP +YV
Sbjct: 22  ALYSFEGQQPGDLNFQAGDRITVISKTDSHFDWWEGKLRGQTGIFPANYV 71

>pdb|1UDL|A Chain A, The Solution Structure Of The Fifth Sh3 Domain Of Intersectin 2 (Kiaa1256) Length = 98

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 174 AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           A+Y++ + N DELSF  G +I V  K   +P W  GE+ G TG FP +YV+
Sbjct: 39  AMYDYAANNEDELSFSKGQLINVMNKD--DPDWWQGEINGVTGLFPSNYVK 87

>pdb|1GCQ|A Chain A, Crystal Structure Of Vav And Grb2 Sh3 Domains Length = 61

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD 227
           +A+++F  +   EL F+ GD I V    N++P W  G   GQTG FP +YV P +
Sbjct: 6   QALFDFDPQEDGELGFRRGDFIHV--MDNSDPNWWKGACHGQTGMFPRNYVTPVN 58

>pdb|1IO6|A Chain A, Growth Factor Receptor-Bound Protein 2 (Grb2) C-Terminal Sh3 Domain Complexed With A Ligand Peptide (Nmr, Minimized Mean Structure) Length = 59

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD 227
           +A+++F  +   EL F+ GD I V    N++P W  G   GQTG FP +YV P +
Sbjct: 6   QALFDFDPQEDGELGFRRGDFIHV--MDNSDPNWWKGACHGQTGMFPRNYVTPVN 58

>pdb|3U23|A Chain A, Atomic Resolution Crystal Structure Of The 2nd Sh3 Domain From Human Cd2ap (Cms) In Complex With A Proline-Rich Peptide From Human Rin3 Length = 65

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC 226
           S+ R+ + ++E++ +N DEL  + GDII   + +  E GW +G L  + G FP ++V+  
Sbjct: 5   SKKRQCKVLFEYIPQNEDELELKVGDII--DINEEVEEGWWSGTLNNKLGLFPSNFVKEL 62
Query: 227 DET 229
           + T
Sbjct: 63  EVT 65

>pdb|4F14|A Chain A, Structure Of The Sh3 Domain Of Human Nebulette In Complex With A Peptide Of Xirp2 Length = 64

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 10/65 (15%)
Query: 165 GVSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEP---GWLAGELR--GQTGWFP 219
            ++  R YRA+Y++ +++ DE+SF+ GD I+     N +P   GW+ G ++  G+TG  P
Sbjct: 2   AMANLRTYRAMYDYSAQDEDEVSFRDGDYIV-----NVQPIDDGWMYGTVQRTGRTGMLP 56
Query: 220 ESYVE 224
            +Y+E
Sbjct: 57  ANYIE 61

>pdb|2ED0|A Chain A, Solution Structure Of The Sh3 Domain Of Abl Interactor 2 (Abelson Interactor 2) Length = 78

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 174 AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           AIY++     DELSFQ G II V +K+N + GW  G + G TG FP +YVE
Sbjct: 22  AIYDYTKDKEDELSFQEGAIIYV-IKKN-DDGWYEGVMNGVTGLFPGNYVE 70

>pdb|1GRI|A Chain A, Grb2 Length = 217

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET 229
           +A+++F  +   EL F+ GD I V    N++P W  G   GQTG FP +YV P +  
Sbjct: 162 QALFDFDPQEDGELGFRRGDFIHV--MDNSDPNWWKGACHGQTGMFPRNYVTPVNRN 216

>pdb|2VVK|A Chain A, Grb2 Sh3c (1) Length = 56

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD 227
           +A+++F  +   EL F+ GD I V    N++P W  G   GQTG FP +YV P +
Sbjct: 4   QALFDFDPQEDGELGFRRGDFIHV--MDNSDPNWWKGACHGQTGMFPRNYVTPVN 56

>pdb|1W6X|A Chain A, Sh3 Domain Of P40phox, Component Of The Nadph Oxidase Length = 60

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 168 EYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           ++ R  A+++F   +  EL+F+ GD+I +  + N +  WL G +RG TG FP S+V+
Sbjct: 3   KHMRAEALFDFTGNSKLELNFKAGDVIFLLSRINKD--WLEGTVRGATGIFPLSFVK 57

>pdb|3IQL|A Chain A, Crystal Structure Of The Rat Endophilin-A1 Sh3 Domain Length = 71

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           RA+Y+F   N  EL F+ GDII +      +  W  G L GQ+G+FP +YVE
Sbjct: 15  RALYDFEPENEGELGFKEGDIITL--TNQIDENWYEGMLHGQSGFFPINYVE 64

>pdb|2YDL|A Chain A, Crystal Structure Of Sh3c From Cin85 Length = 69

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 34/52 (65%)
Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           + I+ + ++N DEL+ + GDI+ +  K   + GW  GEL G+ G FP+++V+
Sbjct: 6   KVIFPYEAQNDDELTIKEGDIVTLINKDCIDVGWWEGELNGRRGVFPDNFVK 57

>pdb|1H3H|A Chain A, Structural Basis For Specific Recognition Of An Rxxk-Containing Slp-76 Peptide By The Gads C-Terminal Sh3 Domain Length = 60

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
           R  RA+Y+F +   DEL F+ G++  V V  ++ P W  G L  + G FP +YV P
Sbjct: 4   RWARALYDFEALEEDELGFRSGEV--VEVLDSSNPSWWTGRLHNKLGLFPANYVAP 57

>pdb|4IIM|A Chain A, Crystal Structure Of The Second Sh3 Domain Of Itsn1 Bound With A Synthetic Peptide Length = 70

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/52 (38%), Positives = 34/52 (65%), Gaps = 3/52 (5%)
Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           +A+Y + ++  + L+F   D+I V  +Q+    W  GE++GQ GWFP+SYV+
Sbjct: 16  QALYPWRAKKDNHLNFNKNDVITVLEQQDM---WWFGEVQGQKGWFPKSYVK 64

>pdb|1UTI|A Chain A, MonaGADS SH3C IN COMPLEX WITH HPK DERIVED PEPTIDE Length = 58

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
           R  RA+Y+F +   DEL F+ G++  V V  ++ P W  G L  + G FP +YV P
Sbjct: 2   RWARALYDFEALEEDELGFRSGEV--VEVLDSSNPSWWTGRLHNKLGLFPANYVAP 55

>pdb|2L0A|A Chain A, Solution Nmr Structure Of Signal Transducing Adapter Molecule 1 Stam-1 From Homo Sapiens, Northeast Structural Genomics Consortium Target Hr4479e Length = 72

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 168 EYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYV 223
           E R+ RAIY+F +   +EL+F+ G+II   V  +++P W  GE     G FP ++V
Sbjct: 16  EARKVRAIYDFEAAEDNELTFKAGEIIT--VLDDSDPNWWKGETHQGIGLFPSNFV 69

>pdb|1Z9Q|A Chain A, Solution Structure Of Sh3 Domain Of P40phox Length = 79

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           R  A+++F   +  EL+F+ GD+I +  + N +  WL G +RG TG FP S+V+
Sbjct: 20  RAEALFDFTGNSKLELNFKAGDVIFLLSRINKD--WLEGTVRGATGIFPLSFVK 71

>pdb|1K4U|S Chain S, Solution Structure Of The C-Terminal Sh3 Domain Of P67phox Complexed With The C-Terminal Tail Region Of P47phox Length = 62

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           +  A++ + +   ++L FQ GDII+V  K N E  WL GE +G+ G FP+ +VE
Sbjct: 7   QVEALFSYEATQPEDLEFQEGDIILVLSKVNEE--WLEGESKGKVGIFPKVFVE 58

>pdb|2LJ0|A Chain A, The Third Sh3 Domain Of R85fl Length = 65

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR--GQTGWFPESYVEP 225
           Y+A+Y ++ +N DEL  + GDI  V V +  + GW  G  R   Q G FP +YV+P
Sbjct: 9   YQALYSYIPQNDDELELRDGDI--VDVMEKCDDGWFVGTSRRTKQFGTFPGNYVKP 62

>pdb|2DA9|A Chain A, Solution Structure Of The Third Sh3 Domain Of Sh3-Domain Kinase Binding Protein 1 (Regulator Of Ubiquitous Kinase, Ruk) Length = 70

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 34/52 (65%)
Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           + I+ + ++N DEL+ + GDI+ +  K   + GW  GEL G+ G FP+++V+
Sbjct: 11  KVIFPYEAQNDDELTIKEGDIVTLINKDCIDVGWWEGELNGRRGVFPDNFVK 62

>pdb|2K9G|A Chain A, Solution Structure Of The Third Sh3 Domain Of The Cin85 Adapter Protein Length = 73

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 19/52 (36%), Positives = 34/52 (65%)
Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           + I+ + ++N DEL+ + GDI+ +  K   + GW  GEL G+ G FP+++V+
Sbjct: 13  KVIFPYEAQNDDELTIKEGDIVTLINKDCIDVGWWEGELNGRRGVFPDNFVK 64

>pdb|2K6D|A Chain A, Cin85 Sh3-C Domain In Complex With Ubiquitin Length = 62

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 19/52 (36%), Positives = 34/52 (65%)
Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           + I+ + ++N DEL+ + GDI+ +  K   + GW  GEL G+ G FP+++V+
Sbjct: 7   KVIFPYEAQNDDELTIKEGDIVTLINKDCIDVGWWEGELNGRRGVFPDNFVK 58

>pdb|1ARK|A Chain A, Sh3 Domain From Human Nebulin, Nmr, 15 Structures Length = 60

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 21/55 (38%), Positives = 37/55 (67%), Gaps = 4/55 (7%)
Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR--GQTGWFPESYVE 224
           +RA+Y++++ + DE+SF+ GD I+    Q  + GW+ G ++  G+TG  P +YVE
Sbjct: 6   FRAMYDYMAADADEVSFKDGDAII--NVQAIDEGWMYGTVQRTGRTGMLPANYVE 58

>pdb|1OEB|A Chain A, MonaGADS SH3C DOMAIN Length = 62

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
           R  RA+Y+F +   DEL F+ G++  V V  ++ P W  G L  + G FP +YV P
Sbjct: 6   RWARALYDFEALEEDELGFRSGEV--VEVLDSSNPSWWTGRLHNKLGLFPANYVAP 59

>pdb|2LJ1|A Chain A, The Third Sh3 Domain Of R85fl With Ataxin-7 Prr Length = 64

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR--GQTGWFPESYVEP 225
           Y+A+Y ++ +N DEL  + GDI  V V +  + GW  G  R   Q G FP +YV+P
Sbjct: 9   YQALYSYIPQNDDELELRDGDI--VDVMEKCDDGWFVGTSRRTKQFGTFPGNYVKP 62

>pdb|3HAJ|A Chain A, Crystal Structure Of Human Pacsin2 F-Bar Domain (P212121 Lattice) Length = 486

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL-RGQTGWFPESYVE 224
           R RA+Y++  +  DELSF+ GD +   ++   E GW  G L  GQ G +P +YVE
Sbjct: 430 RVRALYDYEGQEHDELSFKAGDEL-TKMEDEDEQGWCKGRLDNGQVGLYPANYVE 483

>pdb|2A28|A Chain A, Atomic-Resolution Crystal Structure Of The Second Sh3 Domain Of Yeast Bzz1 Determined From A Pseudomerohedrally Twinned Crystal Length = 54

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
            AIY + ++  DE+S  PGDII V ++ +   GW  GE  G  G FP SY +
Sbjct: 4   EAIYAYEAQGDDEISIDPGDIITV-IRGDDGSGWTYGECDGLKGLFPTSYCK 54

>pdb|2FEI|A Chain A, Solution Structure Of The Second Sh3 Domain Of Human Cms Protein Length = 65

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 19/55 (34%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           R+ + ++E++ +N DEL  + GDII   + +  E GW +G L  + G FP ++V+
Sbjct: 2   RQCKVLFEYIPQNEDELELKVGDII--DINEEVEEGWWSGTLNNKLGLFPSNFVK 54

>pdb|2DYB|A Chain A, The Crystal Structure Of Human P40(Phox) Length = 341

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           R  A+++F   +  EL+F+ GD+I +  + N +  WL G +RG TG FP S+V+
Sbjct: 176 RAEALFDFTGNSKLELNFKAGDVIFLLSRINKD--WLEGTVRGATGIFPLSFVK 227

>pdb|2XMF|A Chain A, Myosin 1e Sh3 Length = 60

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYV 223
           +A+Y + +++ DELSF   DII + +K++   GW  G LRG+ G FP +YV
Sbjct: 9   KALYAYDAQDTDELSFNANDIIDI-IKEDPS-GWWTGRLRGKQGLFPNNYV 57

>pdb|2D0N|A Chain A, Crystal Structure Of The C-Terminal Sh3 Domain Of The Adaptor Protein Gads In Complex With Slp-76 Motif Peptide Reveals A Unique Sh3-Sh3 Interaction Length = 59

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
           RA+Y+F +   DEL F+ G++  V V  ++ P W  G L  + G FP +YV P
Sbjct: 6   RALYDFEALEEDELGFRSGEV--VEVLDSSNPSWWTGRLHNKLGLFPANYVAP 56

>pdb|4GLM|A Chain A, Crystal Structure Of The Sh3 Domain Of Dnmbp Protein [homo Sapiens] Length = 72

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 174 AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC 226
           A+Y F +   +EL F+ GD I +      E GWL G L+G+TG FP  +V+ C
Sbjct: 18  ALYRFQALEPNELDFEVGDKIRILA--TLEDGWLEGSLKGRTGIFPYRFVKLC 68

>pdb|3C0C|A Chain A, X-Ray Crystal Structure Of The Rat Endophilin A2 Sh3 Domain Length = 73

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           +A+Y+F   N  EL F+ GD+I +      +  W  G L GQ+G+FP SYV+
Sbjct: 17  KALYDFEPENDGELGFREGDLITL--TNQIDENWYEGXLHGQSGFFPLSYVQ 66

>pdb|2VWF|A Chain A, Grb2 Sh3c (2) Length = 58

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYV 223
           +A+++F  +   EL F+ GD I V    N++P W  G   GQTG FP +YV
Sbjct: 6   QALFDFDPQEDGELGFRRGDFIHV--MDNSDPNWWKGACHGQTGMFPRNYV 54

>pdb|2DBM|A Chain A, Solution Structures Of The Sh3 Domain Of Human Sh3- Containing Grb2-Like Protein 2 Length = 73

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           RA+Y+F   N  EL F+ GDII   +    +  W  G L G +G+FP +YVE
Sbjct: 11  RALYDFEPENEGELGFKEGDIIT--LTNQIDENWYEGMLHGHSGFFPINYVE 60

>pdb|1OOT|A Chain A, Crystal Structure Of The Sh3 Domain From A S. Cerevisiae Hypothetical 40.4 Kda Protein At 1.39 A Resolution Length = 60

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 174 AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           A+Y F      +L F+ GD+I +  K +++  W  G + G+ G FP +YVE
Sbjct: 8   ALYSFAGEESGDLPFRKGDVITILKKSDSQNDWWTGRVNGREGIFPANYVE 58

>pdb|4GBQ|A Chain A, Solution Nmr Structure Of The Grb2 N-Terminal Sh3 Domain Complexed With A Ten-Residue Peptide Derived From Sos Direct Refinement Against Noes, J-Couplings, And 1h And 13c Chemical Shifts, 15 Structures Length = 74

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 174 AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           A Y+F +   DELSF+ GDI+ V + +  +  W   EL G+ G+ P++Y+E
Sbjct: 14  AKYDFKATADDELSFKRGDILKV-LNEECDQNWYKAELNGKDGFIPKNYIE 63

>pdb|2KRM|A Chain A, Rdc Refined Solution Structure Of The First Sh3 Domain Of Cd2ap Length = 57

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           Y   Y++ + + DEL+ + G+II   VK+  E GWL GEL G+ G FP+++V+
Sbjct: 3   YIVEYDYDAVHDDELTIRVGEIIR-NVKKLQEEGWLEGELNGRRGMFPDNFVK 54

>pdb|2X3W|D Chain D, Structure Of Mouse Syndapin I (Crystal Form 2) Length = 60

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL-RGQTGWFPESYVE 224
           R RA+Y++  +  DELSF+ GD  +  + +  E GW  G L  GQ G +P +YVE
Sbjct: 5   RVRALYDYDGQEQDELSFKAGD-ELTKLGEEDEQGWCRGRLDSGQLGLYPANYVE 58

>pdb|1WI7|A Chain A, Solution Structure Of The Sh3 Domain Of Sh3-Domain Kinase Binding Protein 1 Length = 68

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           S  RR +  + ++ +N DEL  + GDII   V    E GW  G L G+TG FP ++++
Sbjct: 5   SSGRRCQVAFSYLPQNDDELELKVGDII--EVVGEVEEGWWEGVLNGKTGMFPSNFIK 60

>pdb|2J6F|A Chain A, N-Terminal Sh3 Domain Of Cms (Cd2ap Human Homolog) Bound To Cbl-B Peptide Length = 62

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           Y   Y++ + + DEL+ + G+II   VK+  E GWL GEL G+ G FP+++V+
Sbjct: 4   YIVEYDYDAVHDDELTIRVGEIIR-NVKKLQEEGWLEGELNGRRGMFPDNFVK 55

>pdb|1ZLM|A Chain A, Crystal Structure Of The Sh3 Domain Of Human Osteoclast Stimulating Factor Length = 58

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYV 223
           +RA+Y F  R  DEL F+ GDII   +   ++  W  G  +G+TG  P +YV
Sbjct: 6   FRALYTFEPRTPDELYFEEGDIIY--ITDMSDTNWWKGTSKGRTGLIPSNYV 55

>pdb|1K76|A Chain A, Solution Structure Of The C-Terminal Sem-5 Sh3 Domain (Minimized Average Structure) Length = 62

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 168 EYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
           E +  +A+++F  +   EL+F+ GD+I +  K   +P W  G+L  + G FP +YV P
Sbjct: 3   ETKFVQALFDFNPQESGELAFKRGDVITLINKD--DPNWWEGQLNNRRGIFPSNYVAP 58

>pdb|1J3T|A Chain A, Solution Structure Of The Second Sh3 Domain Of Human Intersectin 2 (Kiaa1256) Length = 74

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 10/70 (14%)
Query: 168 EYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD 227
           E  + +A+  + ++  + L+F   DII V  +Q     W  GE+ G  GWFP+SYV    
Sbjct: 9   ENLKAQALCSWTAKKDNHLNFSKHDIITVLEQQE---NWWFGEVHGGRGWFPKSYV---- 61
Query: 228 ETGEVVPGTE 237
              +++PG+E
Sbjct: 62  ---KIIPGSE 68

>pdb|1X2K|A Chain A, Solution Structure Of The Sh3 Domain Of Human Osteoclast Stimulating Factor 1 (Ostf1) Length = 68

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYV 223
           +RA+Y F  R  DEL F+ GDII   +   ++  W  G  +G+TG  P +YV
Sbjct: 10  FRALYTFEPRTPDELYFEEGDIIY--ITDMSDTNWWKGTSKGRTGLIPSNYV 59

>pdb|3EHQ|A Chain A, Crystal Structure Of Human Osteoclast Stimulating Factor Length = 222

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 168 EYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYV 223
           + + +RA+Y F  R  DEL  + GDII +     ++  W  G  +G+TG  P +YV
Sbjct: 13  QVKVFRALYTFEPRTPDELYIEEGDIIYIT--DXSDTNWWKGTSKGRTGLIPSNYV 66

>pdb|2A08|A Chain A, Structure Of The Yeast Yhh6 Sh3 Domain Length = 60

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 174 AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYV 223
           A+Y F      +L+F+ GD+I +  K +++  W  G   G+ G FP +YV
Sbjct: 8   ALYNFAGEQPGDLAFKKGDVITILKKSDSQNDWWTGRTNGKEGIFPANYV 57

>pdb|2EW3|A Chain A, Solution Structure Of The Sh3 Domain Of Human Sh3gl3 Length = 68

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           R +Y+F   N  EL F+ GDII +      +  W  G + G++G+FP +YVE
Sbjct: 7   RGLYDFEPENQGELGFKEGDIITL--TNQIDENWYEGMIHGESGFFPINYVE 56

>pdb|3SEM|A Chain A, Sem5 Sh3 Domain Complexed With Peptoid Inhibitor Length = 60

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 168 EYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
           E +  +A+++F  +   EL+F+ GD+I +  K   +P W  G+L  + G FP +YV P
Sbjct: 1   ETKFVQALFDFNPQESGELAFKRGDVITLINKD--DPNWWEGQLNNRRGIFPSNYVCP 56

>pdb|1SEM|A Chain A, Structural Determinants Of Peptide-Binding Orientation And Of Sequence Specificity In Sh3 Domains Length = 58

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 168 EYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
           E +  +A+++F  +   EL+F+ GD+I +  K   +P W  G+L  + G FP +YV P
Sbjct: 1   ETKFVQALFDFNPQESGELAFKRGDVITLINKD--DPNWWEGQLNNRRGIFPSNYVCP 56

>pdb|1AZE|A Chain A, Nmr Structure Of The Complex Between The C32s-Y7v Mutant Of The Nsh3 Domain Of Grb2 With A Peptide From Sos, 10 Structures Length = 56

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 174 AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           A  +F +   DELSF+ GDI+ V + + ++  W   EL G+ G+ P++Y+E
Sbjct: 5   AKVDFKATADDELSFKRGDILKV-LNEESDQNWYKAELNGKDGFIPKNYIE 54

>pdb|1X6B|A Chain A, Solution Structures Of The Sh3 Domain Of Human Rho Guanine Exchange Factor (Gef) 16 Length = 79

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 5/48 (10%)
Query: 178 FVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE-LR-GQTGWFPESYV 223
           F ++  DE++ Q  D+++V      E GWL GE LR G+TGWFPE + 
Sbjct: 26  FFAKQADEVTLQQADVVLVL---QQEDGWLYGERLRDGETGWFPEDFA 70

>pdb|4HXJ|A Chain A, Crystal Structure Of Sh3:rgt Complex Length = 60

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR-GQTGWFPESYVEPCD 227
           + A+Y++ SR   +LSF+ G+ + + V       WLA  L  GQTG+ P +YV P D
Sbjct: 5   FVALYDYESRTETDLSFKKGERLQI-VNNTEGDWWLAHSLSTGQTGYIPSNYVAPSD 60

>pdb|2E5K|A Chain A, Solution Structure Of Sh3 Domain In Suppressor Of T-Cell Receptor Signaling 1 Length = 94

Iteration: 1
 Score = 41.2 bits (95), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Query: 159 RTARFRGVSEYRRYRAIYEFVSRNGDELSFQPGD-IIMVPVKQNA-EPGWLAGE--LRGQ 214
           R  RF   + +   + IY +  +N DEL   PGD I M P++Q +   GW+ G     G 
Sbjct: 9   RDIRF---ANHETLQVIYPYTPQNDDELELVPGDFIFMSPMEQTSTSEGWIYGTSLTTGC 65
Query: 215 TGWFPESYVEPCDE 228
           +G  PE+Y+   DE
Sbjct: 66  SGLLPENYITKADE 79

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	336
1ng2_A	193	Neutrophil cytosolic factor 1; P47PHOX, autoinhibi	2e-25
1ng2_A	193	Neutrophil cytosolic factor 1; P47PHOX, autoinhibi	1e-23
1ng2_A	193	Neutrophil cytosolic factor 1; P47PHOX, autoinhibi	2e-07
1ng2_A	193	Neutrophil cytosolic factor 1; P47PHOX, autoinhibi	5e-06
1uff_A	93	Intersectin 2; beta barrel, SH3 domain, endocytosi	2e-24
1uff_A	93	Intersectin 2; beta barrel, SH3 domain, endocytosi	5e-09
2dlp_A	85	KIAA1783 protein; SH3 domain, structural genomics,	8e-24
2dlp_A	85	KIAA1783 protein; SH3 domain, structural genomics,	8e-10
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	6e-23
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	4e-16
2dm1_A	73	Protein VAV-2; RHO family guanine nucleotide excha	4e-22
2dm1_A	73	Protein VAV-2; RHO family guanine nucleotide excha	2e-08
1ugv_A	72	KIAA0621, olygophrenin-1 like protein; beta barrel	5e-22
1ugv_A	72	KIAA0621, olygophrenin-1 like protein; beta barrel	1e-08
1x43_A	81	Endophilin B1, SH3 domain GRB2-like protein B1; st	2e-21
1x43_A	81	Endophilin B1, SH3 domain GRB2-like protein B1; st	6e-07
2j6f_A	62	CD2-associated protein; metal-binding, immune resp	3e-21
2j6f_A	62	CD2-associated protein; metal-binding, immune resp	3e-09
2jte_A	64	CD2-associated protein; SH3 domain, coiled coil, c	7e-21
2jte_A	64	CD2-associated protein; SH3 domain, coiled coil, c	8e-08
2dil_A	69	Proline-serine-threonine phosphatase-interacting p	1e-20
2dil_A	69	Proline-serine-threonine phosphatase-interacting p	1e-08
2dil_A	69	Proline-serine-threonine phosphatase-interacting p	7e-08
2k9g_A	73	SH3 domain-containing kinase-binding protein 1; CI	2e-20
2k9g_A	73	SH3 domain-containing kinase-binding protein 1; CI	7e-08
2o2o_A	92	SH3-domain kinase-binding protein 1; CIN85, protei	3e-20
2o2o_A	92	SH3-domain kinase-binding protein 1; CIN85, protei	2e-08
2o2o_A	92	SH3-domain kinase-binding protein 1; CIN85, protei	7e-08
1ujy_A	76	RHO guanine nucleotide exchange factor 6; structur	4e-20
1ujy_A	76	RHO guanine nucleotide exchange factor 6; structur	2e-08
1ujy_A	76	RHO guanine nucleotide exchange factor 6; structur	2e-08
2ydl_A	69	SH3 domain-containing kinase-binding protein 1; si	4e-20
2ydl_A	69	SH3 domain-containing kinase-binding protein 1; si	8e-08
2da9_A	70	SH3-domain kinase binding protein 1; structural ge	7e-20
2da9_A	70	SH3-domain kinase binding protein 1; structural ge	2e-07
2dmo_A	68	Neutrophil cytosol factor 2; SH3 domain, structura	9e-20
2dmo_A	68	Neutrophil cytosol factor 2; SH3 domain, structura	4e-08
2dmo_A	68	Neutrophil cytosol factor 2; SH3 domain, structura	2e-07
2yun_A	79	Nostrin; nitric oxide synthase trafficker, structu	1e-19
2yun_A	79	Nostrin; nitric oxide synthase trafficker, structu	8e-08
2yun_A	79	Nostrin; nitric oxide synthase trafficker, structu	1e-07
2kbt_A	142	Chimera of proto-oncogene VAV, linker, immunoglobu	2e-19
2kbt_A	142	Chimera of proto-oncogene VAV, linker, immunoglobu	2e-06
2e5k_A	94	Suppressor of T-cell receptor signaling 1; SH3 dom	2e-19
2e5k_A	94	Suppressor of T-cell receptor signaling 1; SH3 dom	1e-05
2a28_A	54	BZZ1 protein; SH3 domain, signaling protein; 1.07A	3e-19
2a28_A	54	BZZ1 protein; SH3 domain, signaling protein; 1.07A	2e-07
2a28_A	54	BZZ1 protein; SH3 domain, signaling protein; 1.07A	4e-07
1x2k_A	68	OSTF1, osteoclast stimulating factor 1; SH3 domain	5e-19
1x2k_A	68	OSTF1, osteoclast stimulating factor 1; SH3 domain	3e-09
1x2k_A	68	OSTF1, osteoclast stimulating factor 1; SH3 domain	1e-07
2dl3_A	68	Sorbin and SH3 domain-containing protein 1; ponsin	6e-19
2dl3_A	68	Sorbin and SH3 domain-containing protein 1; ponsin	3e-08
2dl3_A	68	Sorbin and SH3 domain-containing protein 1; ponsin	1e-07
3u23_A	65	CD2-associated protein; structural genomics, struc	6e-19
3u23_A	65	CD2-associated protein; structural genomics, struc	1e-08
3u23_A	65	CD2-associated protein; structural genomics, struc	1e-07
2yuo_A	78	CIP85, RUN and TBC1 domain containing 3; structura	7e-19
2yuo_A	78	CIP85, RUN and TBC1 domain containing 3; structura	4e-08
2yuo_A	78	CIP85, RUN and TBC1 domain containing 3; structura	2e-07
1spk_A	72	RSGI RUH-010, riken cDNA 1300006M19; structural ge	9e-19
1spk_A	72	RSGI RUH-010, riken cDNA 1300006M19; structural ge	1e-06
1k4u_S	62	Phagocyte NADPH oxidase subunit P67PHOX; SH3-pepti	1e-18
1k4u_S	62	Phagocyte NADPH oxidase subunit P67PHOX; SH3-pepti	3e-10
1k4u_S	62	Phagocyte NADPH oxidase subunit P67PHOX; SH3-pepti	6e-08
2kxc_A	67	Brain-specific angiogenesis inhibitor 1-associate	1e-18
2kxc_A	67	Brain-specific angiogenesis inhibitor 1-associate	7e-07
2dyb_A	341	Neutrophil cytosol factor 4; P40(PHOX), NADPH oxid	2e-18
2dyb_A	341	Neutrophil cytosol factor 4; P40(PHOX), NADPH oxid	5e-07
1w70_A	60	Neutrophil cytosol factor 4; NADPH oxidase, P40PHO	2e-18
1w70_A	60	Neutrophil cytosol factor 4; NADPH oxidase, P40PHO	1e-10
1w70_A	60	Neutrophil cytosol factor 4; NADPH oxidase, P40PHO	1e-06
2ak5_A	64	RHO guanine nucleotide exchange factor 7; adaptor	2e-18
2ak5_A	64	RHO guanine nucleotide exchange factor 7; adaptor	1e-08
2ak5_A	64	RHO guanine nucleotide exchange factor 7; adaptor	2e-07
1wi7_A	68	SH3-domain kinase binding protein 1; beta barrel,	2e-18
1wi7_A	68	SH3-domain kinase binding protein 1; beta barrel,	3e-08
1wi7_A	68	SH3-domain kinase binding protein 1; beta barrel,	4e-07
2g6f_X	59	RHO guanine nucleotide exchange factor 7; SH3 doma	3e-18
2g6f_X	59	RHO guanine nucleotide exchange factor 7; SH3 doma	1e-08
2g6f_X	59	RHO guanine nucleotide exchange factor 7; SH3 doma	3e-07
2nwm_A	65	Vinexin; cell adhesion; NMR {Homo sapiens} Length	3e-18
2nwm_A	65	Vinexin; cell adhesion; NMR {Homo sapiens} Length	2e-08
2nwm_A	65	Vinexin; cell adhesion; NMR {Homo sapiens} Length	5e-07
1sem_A	58	SEM-5; SRC-homology 3 (SH3) domain, peptide-bindin	3e-18
1sem_A	58	SEM-5; SRC-homology 3 (SH3) domain, peptide-bindin	1e-10
1sem_A	58	SEM-5; SRC-homology 3 (SH3) domain, peptide-bindin	2e-07
1zlm_A	58	Osteoclast stimulating factor 1; beta barrel, sign	4e-18
1zlm_A	58	Osteoclast stimulating factor 1; beta barrel, sign	2e-10
1zlm_A	58	Osteoclast stimulating factor 1; beta barrel, sign	2e-06
2dnu_A	71	RUH-061, SH3 multiple domains 1; RSGI, structural	4e-18
2dnu_A	71	RUH-061, SH3 multiple domains 1; RSGI, structural	3e-09
2dnu_A	71	RUH-061, SH3 multiple domains 1; RSGI, structural	2e-07
3rnj_A	67	Brain-specific angiogenesis inhibitor 1-associate	4e-18
3rnj_A	67	Brain-specific angiogenesis inhibitor 1-associate	3e-06
2fei_A	65	CD2-associated protein; CMS SH3 domain, structural	5e-18
2fei_A	65	CD2-associated protein; CMS SH3 domain, structural	1e-08
2fei_A	65	CD2-associated protein; CMS SH3 domain, structural	3e-07
1gbq_A	74	GRB2; complex (signal transduction/peptide), SH3 d	5e-18
1gbq_A	74	GRB2; complex (signal transduction/peptide), SH3 d	2e-06
2djq_A	68	SH3 domain containing ring finger 2; MUS musculus	6e-18
2djq_A	68	SH3 domain containing ring finger 2; MUS musculus	7e-09
2djq_A	68	SH3 domain containing ring finger 2; MUS musculus	1e-06
2bz8_A	58	SH3-domain kinase binding protein 1; SH3 domain, C	7e-18
2bz8_A	58	SH3-domain kinase binding protein 1; SH3 domain, C	2e-08
2bz8_A	58	SH3-domain kinase binding protein 1; SH3 domain, C	1e-07
2lqn_A	303	CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT	7e-18
2lqn_A	303	CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT	2e-10
2lqn_A	303	CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT	6e-04
2drm_A	58	Acanthamoeba myosin IB; SH3 domain, contractIle pr	7e-18
2drm_A	58	Acanthamoeba myosin IB; SH3 domain, contractIle pr	1e-08
2drm_A	58	Acanthamoeba myosin IB; SH3 domain, contractIle pr	6e-07
2ed0_A	78	ABL interactor 2; coiled coil, cytoskeleton, nucle	7e-18
2ed0_A	78	ABL interactor 2; coiled coil, cytoskeleton, nucle	2e-09
2ed0_A	78	ABL interactor 2; coiled coil, cytoskeleton, nucle	5e-07
2xmf_A	60	Myosin 1E SH3; motor protein, SH3 domain; HET: DIA	8e-18
2xmf_A	60	Myosin 1E SH3; motor protein, SH3 domain; HET: DIA	8e-10
2xmf_A	60	Myosin 1E SH3; motor protein, SH3 domain; HET: DIA	5e-07
2dl7_A	73	KIAA0769 protein; SH3 domain, FCHSD2, structural g	9e-18
2dl7_A	73	KIAA0769 protein; SH3 domain, FCHSD2, structural g	4e-07
2i0n_A	80	Class VII unconventional myosin; beta-sheet loop,	9e-18
2i0n_A	80	Class VII unconventional myosin; beta-sheet loop,	6e-07
2eyz_A	304	V-CRK sarcoma virus CT10 oncogene homolog isoform	1e-17
2eyz_A	304	V-CRK sarcoma virus CT10 oncogene homolog isoform	2e-15
2ega_A	70	SH3 and PX domain-containing protein 2A; SH3 domai	1e-17
2ega_A	70	SH3 and PX domain-containing protein 2A; SH3 domai	9e-09
2ega_A	70	SH3 and PX domain-containing protein 2A; SH3 domai	4e-07
2d8h_A	80	SH3YL1 protein; SH3 domain, hypothetical protein S	1e-17
2d8h_A	80	SH3YL1 protein; SH3 domain, hypothetical protein S	2e-10
2d8h_A	80	SH3YL1 protein; SH3 domain, hypothetical protein S	4e-06
1bb9_A	115	Amphiphysin 2; transferase, SH3 domain; 2.20A {Rat	1e-17
3o5z_A	90	Phosphatidylinositol 3-kinase regulatory subunit;	2e-17
3o5z_A	90	Phosphatidylinositol 3-kinase regulatory subunit;	9e-05
2cre_A	71	HEF-like protein; SH3 domain, SRC homology 3 domai	3e-17
2cre_A	71	HEF-like protein; SH3 domain, SRC homology 3 domai	3e-06
2dl4_A	68	Protein STAC; SH3 domain, STAC protein, SRC homolo	3e-17
2dl4_A	68	Protein STAC; SH3 domain, STAC protein, SRC homolo	6e-10
2dl4_A	68	Protein STAC; SH3 domain, STAC protein, SRC homolo	2e-06
1x2p_A	68	Protein arginine N-methyltransferase 2; SH3 domain	4e-17
1x2p_A	68	Protein arginine N-methyltransferase 2; SH3 domain	5e-10
1x2p_A	68	Protein arginine N-methyltransferase 2; SH3 domain	3e-06
1zx6_A	58	YPR154WP; SH3 domain, protein binding; 1.60A {Sacc	4e-17
1zx6_A	58	YPR154WP; SH3 domain, protein binding; 1.60A {Sacc	3e-11
1zx6_A	58	YPR154WP; SH3 domain, protein binding; 1.60A {Sacc	4e-07
2dbm_A	73	SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH	4e-17
2dbm_A	73	SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH	4e-08
2dbm_A	73	SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH	3e-06
1udl_A	98	Intersectin 2, KIAA1256; beta barrel, SH3 domain,	4e-17
1udl_A	98	Intersectin 2, KIAA1256; beta barrel, SH3 domain,	2e-09
1udl_A	98	Intersectin 2, KIAA1256; beta barrel, SH3 domain,	4e-09
3thk_A	73	Spectrin alpha chain, brain; SH3 domain, chimera,	4e-17
3thk_A	73	Spectrin alpha chain, brain; SH3 domain, chimera,	3e-10
3thk_A	73	Spectrin alpha chain, brain; SH3 domain, chimera,	5e-07
1uti_A	58	GRB2-related adaptor protein 2; signaling protein	4e-17
1uti_A	58	GRB2-related adaptor protein 2; signaling protein	5e-10
1uti_A	58	GRB2-related adaptor protein 2; signaling protein	2e-06
2dl8_A	72	SLIT-ROBO RHO GTPase-activating protein 2; SH3 dom	5e-17
2dl8_A	72	SLIT-ROBO RHO GTPase-activating protein 2; SH3 dom	8e-09
2dl8_A	72	SLIT-ROBO RHO GTPase-activating protein 2; SH3 dom	3e-07
2ed1_A	76	130 kDa phosphatidylinositol 4,5-biphosphate- depe	5e-17
2ed1_A	76	130 kDa phosphatidylinositol 4,5-biphosphate- depe	1e-05
1uhf_A	69	Intersectin 2; beta barrel, SH3 domain, riken stru	6e-17
1uhf_A	69	Intersectin 2; beta barrel, SH3 domain, riken stru	2e-15
1uhf_A	69	Intersectin 2; beta barrel, SH3 domain, riken stru	8e-06
2csi_A	76	RIM-BP2, RIM binding protein 2; SH3 domain, struct	6e-17
2csi_A	76	RIM-BP2, RIM binding protein 2; SH3 domain, struct	1e-06
2cub_A	88	Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor	6e-17
2cub_A	88	Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor	4e-08
2cub_A	88	Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor	9e-07
2fpe_A	62	C-JUN-amino-terminal kinase interacting protein 1;	6e-17
2fpe_A	62	C-JUN-amino-terminal kinase interacting protein 1;	2e-05
1uhc_A	79	KIAA1010 protein; beta barrel, SH3, human cDNA, st	7e-17
1uhc_A	79	KIAA1010 protein; beta barrel, SH3, human cDNA, st	9e-06
1z9q_A	79	Neutrophil cytosol factor 4; oxidoreductase activa	7e-17
1z9q_A	79	Neutrophil cytosol factor 4; oxidoreductase activa	2e-09
1z9q_A	79	Neutrophil cytosol factor 4; oxidoreductase activa	1e-06
2x3w_D	60	Syndapin I, protein kinase C and casein kinase sub	8e-17
2x3w_D	60	Syndapin I, protein kinase C and casein kinase sub	1e-04
1j3t_A	74	Intersectin 2; beta barrel, SH3 domain, riken stru	9e-17
1j3t_A	74	Intersectin 2; beta barrel, SH3 domain, riken stru	2e-09
1j3t_A	74	Intersectin 2; beta barrel, SH3 domain, riken stru	2e-05
3ngp_A	62	Spectrin alpha chain, brain; beta barrel, structur	9e-17
3ngp_A	62	Spectrin alpha chain, brain; beta barrel, structur	8e-10
3ngp_A	62	Spectrin alpha chain, brain; beta barrel, structur	6e-07
4f14_A	64	Nebulette; SH3 domain, heart muscle, actin-binding	1e-16
4f14_A	64	Nebulette; SH3 domain, heart muscle, actin-binding	4e-07
4f14_A	64	Nebulette; SH3 domain, heart muscle, actin-binding	7e-05
2vwf_A	58	Growth factor receptor-bound protein 2; polymorphi	1e-16
2vwf_A	58	Growth factor receptor-bound protein 2; polymorphi	1e-10
2vwf_A	58	Growth factor receptor-bound protein 2; polymorphi	1e-06
1oot_A	60	Hypothetical 40.4 kDa protein in PES4-His2 interge	1e-16
1oot_A	60	Hypothetical 40.4 kDa protein in PES4-His2 interge	2e-10
1oot_A	60	Hypothetical 40.4 kDa protein in PES4-His2 interge	5e-05
2epd_A	76	RHO GTPase-activating protein 4; SH3 domain, struc	1e-16
2epd_A	76	RHO GTPase-activating protein 4; SH3 domain, struc	6e-09
2epd_A	76	RHO GTPase-activating protein 4; SH3 domain, struc	1e-06
1uj0_A	62	Signal transducing adaptor molecule (SH3 domain an	1e-16
1uj0_A	62	Signal transducing adaptor molecule (SH3 domain an	2e-09
1uj0_A	62	Signal transducing adaptor molecule (SH3 domain an	1e-05
2ew3_A	68	SH3-containing GRB2-like protein 3; SH3GL3, soluti	1e-16
2ew3_A	68	SH3-containing GRB2-like protein 3; SH3GL3, soluti	1e-08
2ew3_A	68	SH3-containing GRB2-like protein 3; SH3GL3, soluti	2e-06
2cuc_A	70	SH3 domain containing ring finger 2; structural ge	1e-16
2cuc_A	70	SH3 domain containing ring finger 2; structural ge	2e-05
1wxu_A	93	Peroxisomal biogenesis factor 13; SH3 domain, PEX1	2e-16
1wxu_A	93	Peroxisomal biogenesis factor 13; SH3 domain, PEX1	5e-04
3c0c_A	73	Endophilin-A2; endocytosis, SH3, voltage-gated cal	2e-16
3c0c_A	73	Endophilin-A2; endocytosis, SH3, voltage-gated cal	2e-08
3c0c_A	73	Endophilin-A2; endocytosis, SH3, voltage-gated cal	2e-06
2ct3_A	70	Vinexin; SH3 domian, structural genomics, NPPSFA,	2e-16
2ct3_A	70	Vinexin; SH3 domian, structural genomics, NPPSFA,	3e-05
2ysq_A	81	RHO guanine nucleotide exchange factor 9; SH3 doma	2e-16
2ysq_A	81	RHO guanine nucleotide exchange factor 9; SH3 doma	5e-09
2ysq_A	81	RHO guanine nucleotide exchange factor 9; SH3 doma	8e-07
1x2q_A	88	Signal transducing adapter molecule 2; SH3 domain,	2e-16
1x2q_A	88	Signal transducing adapter molecule 2; SH3 domain,	6e-08
1x2q_A	88	Signal transducing adapter molecule 2; SH3 domain,	3e-06
1yn8_A	59	NBP2, NAP1-binding protein 2; SH3 domain, unknown	2e-16
1yn8_A	59	NBP2, NAP1-binding protein 2; SH3 domain, unknown	2e-05
3eg3_A	63	Proto-oncogene tyrosine-protein kinase ABL1; beta,	2e-16
3eg3_A	63	Proto-oncogene tyrosine-protein kinase ABL1; beta,	1e-05
2pqh_A	80	Spectrin alpha chain, brain; SH3 domain, chimera,	3e-16
2pqh_A	80	Spectrin alpha chain, brain; SH3 domain, chimera,	1e-09
2pqh_A	80	Spectrin alpha chain, brain; SH3 domain, chimera,	1e-06
2ekh_A	80	SH3 and PX domain-containing protein 2A; SH3 domai	3e-16
2ekh_A	80	SH3 and PX domain-containing protein 2A; SH3 domai	5e-08
2ekh_A	80	SH3 and PX domain-containing protein 2A; SH3 domai	3e-06
1s1n_A	68	Nephrocystin 1; beta barrel, cell adhesion; NMR {H	3e-16
1s1n_A	68	Nephrocystin 1; beta barrel, cell adhesion; NMR {H	2e-05
2l0a_A	72	STAM-1, signal transducing adapter molecule 1; str	4e-16
2l0a_A	72	STAM-1, signal transducing adapter molecule 1; str	5e-09
2l0a_A	72	STAM-1, signal transducing adapter molecule 1; str	3e-05
2fpf_A	71	C-JUN-amino-terminal kinase interacting protein 1;	4e-16
2fpf_A	71	C-JUN-amino-terminal kinase interacting protein 1;	2e-04
2eqi_A	69	Phospholipase C, gamma 2; SH3 domain, PLCG2, struc	4e-16
2eqi_A	69	Phospholipase C, gamma 2; SH3 domain, PLCG2, struc	4e-08
2eqi_A	69	Phospholipase C, gamma 2; SH3 domain, PLCG2, struc	1e-04
2lcs_A	73	NAP1-binding protein 2; adaptor, transferase, sign	5e-16
2lcs_A	73	NAP1-binding protein 2; adaptor, transferase, sign	3e-05
2ege_A	75	Uncharacterized protein KIAA1666; SH3 domain, KIAA	6e-16
2ege_A	75	Uncharacterized protein KIAA1666; SH3 domain, KIAA	3e-06
1neg_A	83	Spectrin alpha chain, brain; SH3-domain fold, five	7e-16
1neg_A	83	Spectrin alpha chain, brain; SH3-domain fold, five	1e-09
1neg_A	83	Spectrin alpha chain, brain; SH3-domain fold, five	7e-06
1x69_A	79	Cortactin isoform A; SH3 domain, CTTN, oncogene EM	7e-16
1x69_A	79	Cortactin isoform A; SH3 domain, CTTN, oncogene EM	3e-07
1x69_A	79	Cortactin isoform A; SH3 domain, CTTN, oncogene EM	1e-05
3ulr_B	65	SRC substrate cortactin; SH3, protein-protein inte	8e-16
3ulr_B	65	SRC substrate cortactin; SH3, protein-protein inte	5e-08
3ulr_B	65	SRC substrate cortactin; SH3, protein-protein inte	2e-05
1x6b_A	79	RHO guanine exchange factor (GEF) 16; SH3 domain,	1e-15
1x6b_A	79	RHO guanine exchange factor (GEF) 16; SH3 domain,	1e-04
2gnc_A	60	SLIT-ROBO RHO GTPase-activating protein 1; beta ba	1e-15
2gnc_A	60	SLIT-ROBO RHO GTPase-activating protein 1; beta ba	8e-10
2gnc_A	60	SLIT-ROBO RHO GTPase-activating protein 1; beta ba	5e-06
2dbk_A	88	CRK-like protein; structural genomics, NPPSFA, nat	1e-15
2dbk_A	88	CRK-like protein; structural genomics, NPPSFA, nat	4e-07
2dbk_A	88	CRK-like protein; structural genomics, NPPSFA, nat	7e-07
1ruw_A	69	Myosin-3 isoform, MYO3; SH3 domain, yeast, high-th	1e-15
1ruw_A	69	Myosin-3 isoform, MYO3; SH3 domain, yeast, high-th	5e-07
1wxb_A	68	Epidermal growth factor receptor pathway substrate	2e-15
1wxb_A	68	Epidermal growth factor receptor pathway substrate	1e-08
1wxb_A	68	Epidermal growth factor receptor pathway substrate	3e-05
1wyx_A	69	CRK-associated substrate; beta sheets, cell adhesi	3e-15
1wyx_A	69	CRK-associated substrate; beta sheets, cell adhesi	2e-08
1wyx_A	69	CRK-associated substrate; beta sheets, cell adhesi	3e-05
1wie_A	96	RIM binding protein 2; beta barrel, KIAA0318 prote	4e-15
1wie_A	96	RIM binding protein 2; beta barrel, KIAA0318 prote	1e-05
2bzy_A	67	CRK-like protein, CRKL SH3C; SH3 domain, dimer, nu	4e-15
2bzy_A	67	CRK-like protein, CRKL SH3C; SH3 domain, dimer, nu	5e-07
2bzy_A	67	CRK-like protein, CRKL SH3C; SH3 domain, dimer, nu	3e-06
2ebp_A	73	SAM and SH3 domain-containing protein 1; proline-g	4e-15
2ebp_A	73	SAM and SH3 domain-containing protein 1; proline-g	2e-06
2ebp_A	73	SAM and SH3 domain-containing protein 1; proline-g	2e-06
3i5r_A	83	Phosphatidylinositol 3-kinase regulatory subunit a	4e-15
3i5r_A	83	Phosphatidylinositol 3-kinase regulatory subunit a	3e-04
1b07_A	65	Protein (proto-oncogene CRK (CRK)); SH3 domain, in	7e-15
1b07_A	65	Protein (proto-oncogene CRK (CRK)); SH3 domain, in	3e-08
1b07_A	65	Protein (proto-oncogene CRK (CRK)); SH3 domain, in	3e-04
2rf0_A	89	Mitogen-activated protein kinase kinase kinase 10;	8e-15
2rf0_A	89	Mitogen-activated protein kinase kinase kinase 10;	3e-04
2gqi_A	71	RAS GTPase-activating protein 1; GAP, RAS P21 prot	8e-15
2gqi_A	71	RAS GTPase-activating protein 1; GAP, RAS P21 prot	2e-04
1y0m_A	61	1-phosphatidylinositol-4,5-bisphosphate phosphodie	9e-15
1y0m_A	61	1-phosphatidylinositol-4,5-bisphosphate phosphodie	7e-09
1y0m_A	61	1-phosphatidylinositol-4,5-bisphosphate phosphodie	6e-04
1hsq_A	71	Phospholipase C-gamma (SH3 domain); phosphoric die	1e-14
1hsq_A	71	Phospholipase C-gamma (SH3 domain); phosphoric die	2e-08
1hsq_A	71	Phospholipase C-gamma (SH3 domain); phosphoric die	2e-04
4esr_A	69	Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domai	1e-14
4esr_A	69	Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domai	6e-08
4esr_A	69	Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domai	2e-04
1cka_A	57	C-CRK N-terminal SH3 domain; complex (oncogene pro	1e-14
1cka_A	57	C-CRK N-terminal SH3 domain; complex (oncogene pro	1e-08
1cka_A	57	C-CRK N-terminal SH3 domain; complex (oncogene pro	3e-04
2eyx_A	67	V-CRK sarcoma virus CT10 oncogene homolog isoform	1e-14
2eyx_A	67	V-CRK sarcoma virus CT10 oncogene homolog isoform	9e-07
2eyx_A	67	V-CRK sarcoma virus CT10 oncogene homolog isoform	6e-06
1wxt_A	68	Hypothetical protein FLJ21522; SH3 domain, EPS8-re	1e-14
1wxt_A	68	Hypothetical protein FLJ21522; SH3 domain, EPS8-re	6e-08
1wxt_A	68	Hypothetical protein FLJ21522; SH3 domain, EPS8-re	4e-05
1ue9_A	80	Intersectin 2; beta barrel, SH3 domain, riken stru	3e-14
1ue9_A	80	Intersectin 2; beta barrel, SH3 domain, riken stru	2e-04
2j05_A	65	RAS GTPase-activating protein 1; GTPase activation	3e-14
2j05_A	65	RAS GTPase-activating protein 1; GTPase activation	3e-04
1zuu_A	58	BZZ1 protein; SH3 domain, unknown function; 0.97A	3e-14
2ecz_A	70	Sorbin and SH3 domain-containing protein 1; glycop	3e-14
2ecz_A	70	Sorbin and SH3 domain-containing protein 1; glycop	6e-09
2ecz_A	70	Sorbin and SH3 domain-containing protein 1; glycop	9e-04
3haj_A	486	Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR,	4e-14
3haj_A	486	Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR,	1e-04
2jt4_A	71	Cytoskeleton assembly control protein SLA1; endocy	5e-14
1wx6_A	91	Cytoplasmic protein NCK2; SH3 domain, structural g	5e-14
1wx6_A	91	Cytoplasmic protein NCK2; SH3 domain, structural g	1e-06
2csq_A	97	RIM-BP2, RIM binding protein 2; SH3 domain, struct	5e-14
2csq_A	97	RIM-BP2, RIM binding protein 2; SH3 domain, struct	2e-05
3h0h_A	73	Proto-oncogene tyrosine-protein kinase FYN; beta b	6e-14
3h0h_A	73	Proto-oncogene tyrosine-protein kinase FYN; beta b	3e-08
2yup_A	90	Vinexin; sorbin and SH3 domain-containing protein	6e-14
4e6r_A	58	Cytoplasmic protein NCK2; SH3 domain, protein bind	6e-14
4e6r_A	58	Cytoplasmic protein NCK2; SH3 domain, protein bind	2e-06
4e6r_A	58	Cytoplasmic protein NCK2; SH3 domain, protein bind	1e-05
1zuy_A	58	Myosin-5 isoform; SH3 domain, contractIle protein;	6e-14
1zuy_A	58	Myosin-5 isoform; SH3 domain, contractIle protein;	4e-07
1zuy_A	58	Myosin-5 isoform; SH3 domain, contractIle protein;	2e-05
2enm_A	77	Sorting nexin-9; SH3-like barrel, protein transpor	7e-14
2enm_A	77	Sorting nexin-9; SH3-like barrel, protein transpor	2e-04
2dl5_A	78	KIAA0769 protein; SH3 domain, FCHSD2, structural g	8e-14
1gri_A	217	Growth factor bound protein 2; SH2, SH3, signal tr	9e-14
1gri_A	217	Growth factor bound protein 2; SH2, SH3, signal tr	2e-13
2v1q_A	60	SLA1, cytoskeleton assembly control protein SLA1;	9e-14
2o9s_A	67	Ponsin; SH3 domain, signaling protein; 0.83A {Homo	1e-13
2o9s_A	67	Ponsin; SH3 domain, signaling protein; 0.83A {Homo	1e-08
2o9s_A	67	Ponsin; SH3 domain, signaling protein; 0.83A {Homo	4e-04
1jo8_A	58	ABP1P, actin binding protein; SH3 domain actin-bin	1e-13
1jo8_A	58	ABP1P, actin binding protein; SH3 domain actin-bin	3e-08
1jo8_A	58	ABP1P, actin binding protein; SH3 domain actin-bin	3e-04
1u5s_A	71	Cytoplasmic protein NCK2; protein-protein complex,	2e-13
1aww_A	67	ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linke	3e-13
1aww_A	67	ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linke	4e-08
4ag1_C	84	Fynomer; hydrolase-de novo protein complex, inhibi	4e-13
4ag1_C	84	Fynomer; hydrolase-de novo protein complex, inhibi	3e-08
1tg0_A	68	BBC1 protein, myosin tail region-interacting prote	4e-13
1tg0_A	68	BBC1 protein, myosin tail region-interacting prote	2e-10
2rqv_A	108	BUD emergence protein 1; BEM1P, SH3, CDC42P, cytop	6e-13
2rqv_A	108	BUD emergence protein 1; BEM1P, SH3, CDC42P, cytop	7e-04
3cqt_A	79	P59-FYN, proto-oncogene tyrosine-protein kinase FY	7e-13
3cqt_A	79	P59-FYN, proto-oncogene tyrosine-protein kinase FY	1e-07
2ct4_A	70	CDC42-interacting protein 4; thyroid receptor inte	7e-13
1csk_A	71	C-SRC SH3 domain; phosphotransferase; 2.50A {Homo	8e-13
1csk_A	71	C-SRC SH3 domain; phosphotransferase; 2.50A {Homo	2e-07
2kxd_A	73	11-MER peptide, SH3 domain of spectrin alpha CHAI;	9e-13
2kxd_A	73	11-MER peptide, SH3 domain of spectrin alpha CHAI;	2e-08
2kxd_A	73	11-MER peptide, SH3 domain of spectrin alpha CHAI;	1e-05
2vkn_A	70	Protein SSU81; membrane, SH3 domain, transmembrane	1e-12
2vkn_A	70	Protein SSU81; membrane, SH3 domain, transmembrane	2e-07
2vkn_A	70	Protein SSU81; membrane, SH3 domain, transmembrane	1e-04
1jqq_A	92	PEX13P, peroxisomal membrane protein PAS20, PAS20P	1e-12
1jqq_A	92	PEX13P, peroxisomal membrane protein PAS20, PAS20P	2e-04
2kgt_A	72	Tyrosine-protein kinase 6; SH3 domain, SRC kinase,	3e-12
2kgt_A	72	Tyrosine-protein kinase 6; SH3 domain, SRC kinase,	2e-08
2k2m_A	68	EPS8-like protein 1; alternative splicing, coiled	3e-12
2k2m_A	68	EPS8-like protein 1; alternative splicing, coiled	5e-08
2v1r_A	80	Peroxisomal membrane protein PAS20; protein transp	4e-12
2v1r_A	80	Peroxisomal membrane protein PAS20; protein transp	3e-04
2jmc_A	77	Spectrin alpha chain, brain and P41 peptide chimer	5e-12
2jmc_A	77	Spectrin alpha chain, brain and P41 peptide chimer	4e-06
2jmc_A	77	Spectrin alpha chain, brain and P41 peptide chimer	5e-05
2ke9_A	83	Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosp	5e-12
2yt6_A	109	Adult MALE urinary bladder cDNA, riken FULL- lengt	5e-12
1gl5_A	67	Tyrosine-protein kinase TEC; transferase, ATP-bind	6e-12
1gl5_A	67	Tyrosine-protein kinase TEC; transferase, ATP-bind	6e-08
1tuc_A	63	Alpha-spectrin; capping protein, calcium-binding,	1e-11
1tuc_A	63	Alpha-spectrin; capping protein, calcium-binding,	2e-06
1tuc_A	63	Alpha-spectrin; capping protein, calcium-binding,	5e-06
1k1z_A	78	VAV; SH3, proto-oncogene, signaling protein; NMR {	1e-11
2d8j_A	77	FYN-related kinase; SH3 domain, structural genomic	1e-11
2kym_A	120	BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI	1e-11
1nm7_A	69	Peroxisomal membrane protein PAS20; yeast, PEX5P,	2e-11
1nm7_A	69	Peroxisomal membrane protein PAS20; yeast, PEX5P,	4e-04
2yuq_A	85	Tyrosine-protein kinase ITK/TSK; T-cell-specific k	2e-11
2yuq_A	85	Tyrosine-protein kinase ITK/TSK; T-cell-specific k	1e-06
1w1f_A	65	Tyrosine-protein kinase LYN; SH3-domain, SH3 domai	2e-11
1w1f_A	65	Tyrosine-protein kinase LYN; SH3-domain, SH3 domai	3e-11
2oaw_A	65	Spectrin alpha chain, brain; SH3 domain, chimera,	2e-11
2iim_A	62	Proto-oncogene tyrosine-protein kinase LCK; beta-b	4e-11
2iim_A	62	Proto-oncogene tyrosine-protein kinase LCK; beta-b	9e-10
2jw4_A	72	Cytoplasmic protein NCK1; SH3 domain, phosphorylat	7e-11
2jw4_A	72	Cytoplasmic protein NCK1; SH3 domain, phosphorylat	3e-08
2oi3_A	86	Tyrosine-protein kinase HCK; human HCK, SH3, SRC-t	9e-11
2oi3_A	86	Tyrosine-protein kinase HCK; human HCK, SH3, SRC-t	1e-10
3reb_B	90	Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain	9e-11
3reb_B	90	Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain	1e-09
2b86_A	67	Cytoplasmic protein NCK2; NCK SH3 domain, signalin	1e-10
2b86_A	67	Cytoplasmic protein NCK2; NCK SH3 domain, signalin	1e-09
2cud_A	79	SRC-like-adapter; SH3 domain, negative mitogenesis	1e-10
2cud_A	79	SRC-like-adapter; SH3 domain, negative mitogenesis	2e-09
1awj_A	77	ITK; transferase, regulatory intramolecular comple	1e-10
1awj_A	77	ITK; transferase, regulatory intramolecular comple	4e-07
2rqr_A	119	CED-12 homolog, engulfment and cell motility prote	2e-10
1x6g_A	81	Megakaryocyte-associated tyrosine-protein kinase;	2e-10
1x6g_A	81	Megakaryocyte-associated tyrosine-protein kinase;	3e-06
1gcq_C	70	VAV proto-oncogene; SH3 domain, protein-protein co	2e-10
1i07_A	60	Epidermal growth factor receptor kinase substrate	3e-10
1i07_A	60	Epidermal growth factor receptor kinase substrate	5e-07
2jxb_A	86	T-cell surface glycoprotein CD3 epsilon chain, cyt	3e-10
2jxb_A	86	T-cell surface glycoprotein CD3 epsilon chain, cyt	5e-08
2egc_A	75	SH3 and PX domain-containing protein 2A; SH3 domai	5e-10
2egc_A	75	SH3 and PX domain-containing protein 2A; SH3 domai	1e-06
2egc_A	75	SH3 and PX domain-containing protein 2A; SH3 domai	7e-04
2pz1_A	466	RHO guanine nucleotide exchange factor 4; helical	1e-09
2pz1_A	466	RHO guanine nucleotide exchange factor 4; helical	3e-04
1mv3_A	213	MYC box dependent interacting protein 1; tumor sup	2e-09
3qwx_X	174	Cell death abnormality protein 2; cell engulfment,	3e-09
3qwx_X	174	Cell death abnormality protein 2; cell engulfment,	5e-07
3a98_A	184	DOCK2, dedicator of cytokinesis protein 2; protein	4e-09
3a98_A	184	DOCK2, dedicator of cytokinesis protein 2; protein	3e-07
2dvj_A	230	V-CRK sarcoma virus CT10 oncogene homolog, isoform	1e-08
1i1j_A	108	Melanoma derived growth regulatory protein; SH3 su	1e-08
1i1j_A	108	Melanoma derived growth regulatory protein; SH3 su	3e-05
1g2b_A	62	Spectrin alpha chain; capping protein, calcium-bin	1e-08
1g2b_A	62	Spectrin alpha chain; capping protein, calcium-bin	4e-07
3jv3_A	283	Intersectin-1; SH3 domain, DH domain, guanine nucl	2e-08
3jv3_A	283	Intersectin-1; SH3 domain, DH domain, guanine nucl	2e-04
2de0_X	526	Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran	3e-08
1ug1_A	92	KIAA1010 protein; structural genomics, SH3 domain,	2e-07
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	3e-07
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	3e-04
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	2e-06
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	5e-04
4d8k_A	175	Tyrosine-protein kinase LCK; protein kinases, SH2	5e-06
4d8k_A	175	Tyrosine-protein kinase LCK; protein kinases, SH2	4e-05
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	8e-06
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	5e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	3e-05
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	4e-05
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	1e-04

>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B Length = 193

 Score =  100 bits (249), Expect = 2e-25
 Identities = 26/130 (20%), Positives = 46/130 (35%), Gaps = 20/130 (15%)

Query: 118 KYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTARF------------- 163
           + Y A   Y+ T   ++  +  +V+ V +K E+ WW   +  +                 
Sbjct: 12  QTYRAIADYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDE 71

Query: 164 ----RGVSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFP 219
                       Y AI  + +  GDE+S   G+ +   V      GW        TG+FP
Sbjct: 72  TEDPEPNYAGEPYVAIKAYTAVEGDEVSLLEGEAVE--VIHKLLDGWWVIRKDDVTGYFP 129

Query: 220 ESYVEPCDET 229
             Y++   + 
Sbjct: 130 SMYLQKSGQD 139

>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B Length = 193

 Score = 95.1 bits (236), Expect = 1e-23
 Identities = 34/156 (21%), Positives = 59/156 (37%), Gaps = 28/156 (17%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC 226
              + YRAI ++   +G E++   GD++ V  K   E GW   +++ + GW P S++EP 
Sbjct: 9   IILQTYRAIADYEKTSGSEMALSTGDVVEVVEKS--ESGWWFCQMKAKRGWIPASFLEPL 66

Query: 227 DETGEVVPGTELPGDKHHLEL---IAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLG 283
           D   E          + ++ +    A   + +S        + E               G
Sbjct: 67  DSPDETEDPEPNYAGEPYVAIKAYTAVEGDEVS--------LLE---------------G 103

Query: 284 TVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET 319
             V V      GW        TG+FP  Y++   + 
Sbjct: 104 EAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQKSGQD 139

>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B Length = 193

 Score = 49.6 bits (118), Expect = 2e-07
 Identities = 13/66 (19%), Positives = 26/66 (39%), Gaps = 1/66 (1%)

Query: 99  VNNSNLDDLKKTLANMMSDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIG 157
           +   +  D  +      + + Y+A   Y + E  +++  + E + V  K  + WW     
Sbjct: 63  LEPLDSPDETEDPEPNYAGEPYVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIRKD 122

Query: 158 DRTARF 163
           D T  F
Sbjct: 123 DVTGYF 128

>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B Length = 193

 Score = 45.4 bits (107), Expect = 5e-06
 Identities = 15/42 (35%), Positives = 23/42 (54%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVP 324
           G VV V + +E GW   +++ + GW P S++EP D   E   
Sbjct: 33  GDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDETED 74

>1uff_A Intersectin 2; beta barrel, SH3 domain, endocytosis, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 93

 Score = 94.5 bits (235), Expect = 2e-24
 Identities = 33/65 (50%), Positives = 39/65 (60%)

Query: 165 GVSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           G S    YRA+Y F +RN DE+SF  GDII V  K   EPGWL G  +G  GWFP +YVE
Sbjct: 1   GSSGSSGYRALYPFEARNHDEMSFNSGDIIQVDEKTVGEPGWLYGSFQGNFGWFPCNYVE 60

Query: 225 PCDET 229
               +
Sbjct: 61  KMPSS 65

>1uff_A Intersectin 2; beta barrel, SH3 domain, endocytosis, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 93

 Score = 52.1 bits (125), Expect = 5e-09
 Identities = 16/34 (47%), Positives = 19/34 (55%)

Query: 286 VPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET 319
           V  K   EPGWL G  +G  GWFP +YVE    +
Sbjct: 32  VDEKTVGEPGWLYGSFQGNFGWFPCNYVEKMPSS 65

>2dlp_A KIAA1783 protein; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 85

 Score = 92.5 bits (230), Expect = 8e-24
 Identities = 22/76 (28%), Positives = 32/76 (42%)

Query: 165 GVSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           G S      A+  +++ N   LSF  GD+I +      EPGW  G   G++G FP   V+
Sbjct: 4   GSSGSGYVIALRSYITDNCSLLSFHRGDLIKLLPVATLEPGWQFGSAGGRSGLFPADIVQ 63

Query: 225 PCDETGEVVPGTELPG 240
           P           +  G
Sbjct: 64  PAAAPDFSFSKEQRSG 79

>2dlp_A KIAA1783 protein; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 85

 Score = 54.0 bits (130), Expect = 8e-10
 Identities = 12/45 (26%), Positives = 17/45 (37%)

Query: 286 VPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVPGTELPG 330
           +      EPGW  G   G++G FP   V+P           +  G
Sbjct: 35  LLPVATLEPGWQFGSAGGRSGLFPADIVQPAAAPDFSFSKEQRSG 79

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans} Length = 308

 Score = 96.0 bits (238), Expect = 6e-23
 Identities = 36/238 (15%), Positives = 65/238 (27%), Gaps = 46/238 (19%)

Query: 127 DSTEPGD--LTFNQDEVIYVTK---------KENDWWTGTIGDRTARFRGVSE------- 168
           DS+ PG+  LT  + +               KE+      +      F  +         
Sbjct: 71  DSSRPGEYSLTVREADEGNAVCHYLIERGEPKEDGTAAAGVKIANQSFPDIPALLNHFKM 130

Query: 169 ----------------YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR 212
                                  ++F      +L F+ G+ + + + +  +  W A    
Sbjct: 131 RVLTEASLLAAYKKPIIEVVVGTFKFTGERETDLPFEQGERLEI-LSKTNQDWWEARNAL 189

Query: 213 GQTGWFPESYVEPCDETGEVVPGTELPGDKHHLELIAEVPENISDSGGSGIAVEEGPGIP 272
           G TG  P +YV+   E                         + + +    I ++      
Sbjct: 190 GTTGLVPANYVQIQMEFHNDRTSKGASQSSIGSSGGGAERFSSASTSSDNIELQPRLPAK 249

Query: 273 ADIPSPIMGL-----------GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET 319
           A +    +             G  V V Q    G    EL GQ G  P +Y+     +
Sbjct: 250 AKVTFDRVPNAYDPTQLRVKKGQTVLVTQKMSNGMYKAELDGQIGSVPHTYLRFTAVS 307

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans} Length = 308

 Score = 76.8 bits (188), Expect = 4e-16
 Identities = 26/229 (11%), Positives = 53/229 (23%), Gaps = 57/229 (24%)

Query: 51  QRLKITKDHTIKAKEEGDLKDTQSSSDGSQDVFCSVHLQLSTKEKDLEVNNSNLDDLKKT 110
                   + I+  E  +     +    +   F  +   L+  +          +     
Sbjct: 86  DEGNAVCHYLIERGEPKEDGTAAAGVKIANQSFPDIPALLNHFKM-----RVLTEASLLA 140

Query: 111 LANMMSDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIG------------ 157
                  +  +  + +      DL F Q E + +  K   DWW                 
Sbjct: 141 AYKKPIIEVVVGTFKFTGERETDLPFEQGERLEILSKTNQDWWEARNALGTTGLVPANYV 200

Query: 158 -------------------------------------DRTARFRGVSEYRRYRAIYEFVS 180
                                                D       +    +        +
Sbjct: 201 QIQMEFHNDRTSKGASQSSIGSSGGGAERFSSASTSSDNIELQPRLPAKAKVTFDRVPNA 260

Query: 181 RNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET 229
            +  +L  + G  ++V  K +   G    EL GQ G  P +Y+     +
Sbjct: 261 YDPTQLRVKKGQTVLVTQKMS--NGMYKAELDGQIGSVPHTYLRFTAVS 307

>2dm1_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 73

 Score = 87.4 bits (217), Expect = 4e-22
 Identities = 23/69 (33%), Positives = 33/69 (47%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC 226
           S      A Y F +R+  ELS + GD++ +  +   + GW  GE  G+ GWFP +YVE  
Sbjct: 5   SSGGTAVARYNFAARDMRELSLREGDVVRIYSRIGGDQGWWKGETNGRIGWFPSTYVEEE 64

Query: 227 DETGEVVPG 235
                   G
Sbjct: 65  GIQSGPSSG 73

>2dm1_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 73

 Score = 50.0 bits (120), Expect = 2e-08
 Identities = 13/37 (35%), Positives = 17/37 (45%)

Query: 289 KQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVPG 325
           +   + GW  GE  G+ GWFP +YVE          G
Sbjct: 37  RIGGDQGWWKGETNGRIGWFPSTYVEEEGIQSGPSSG 73

>1ugv_A KIAA0621, olygophrenin-1 like protein; beta barrel, GRAF protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 72

 Score = 86.9 bits (216), Expect = 5e-22
 Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
           + +R+ +A+Y   + +  ELSF  G +    V  + EPGWL G L G+TG  PE+YVE 
Sbjct: 8   TPFRKAKALYACKAEHDSELSFTAGTVFDN-VHPSQEPGWLEGTLNGKTGLIPENYVEF 65

>1ugv_A KIAA0621, olygophrenin-1 like protein; beta barrel, GRAF protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 72

 Score = 50.3 bits (121), Expect = 1e-08
 Identities = 16/28 (57%), Positives = 19/28 (67%)

Query: 288 VKQNAEPGWLAGELRGQTGWFPESYVEP 315
           V  + EPGWL G L G+TG  PE+YVE 
Sbjct: 38  VHPSQEPGWLEGTLNGKTGLIPENYVEF 65

>1x43_A Endophilin B1, SH3 domain GRB2-like protein B1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 81

 Score = 85.9 bits (213), Expect = 2e-21
 Identities = 19/63 (30%), Positives = 30/63 (47%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC 226
           S  R+ R +Y++ + N  ELS    ++I V      +  WL GE   Q G  P +Y+E  
Sbjct: 15  SNNRKARVLYDYDAANSTELSLLADEVITVFSVVGMDSDWLMGERGNQKGKVPITYLELL 74

Query: 227 DET 229
           +  
Sbjct: 75  NSG 77

>1x43_A Endophilin B1, SH3 domain GRB2-like protein B1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 81

 Score = 45.8 bits (109), Expect = 6e-07
 Identities = 9/31 (29%), Positives = 13/31 (41%)

Query: 289 KQNAEPGWLAGELRGQTGWFPESYVEPCDET 319
               +  WL GE   Q G  P +Y+E  +  
Sbjct: 47  VVGMDSDWLMGERGNQKGKVPITYLELLNSG 77

>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A Length = 62

 Score = 84.9 bits (211), Expect = 3e-21
 Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 1/61 (1%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETG 230
            Y   Y++ + + DEL+ + G+II   VK+  E GWL GEL G+ G FP+++V+      
Sbjct: 3   DYIVEYDYDAVHDDELTIRVGEIIRN-VKKLQEEGWLEGELNGRRGMFPDNFVKEIKRET 61

Query: 231 E 231
           E
Sbjct: 62  E 62

>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A Length = 62

 Score = 51.8 bits (125), Expect = 3e-09
 Identities = 15/34 (44%), Positives = 21/34 (61%)

Query: 288 VKQNAEPGWLAGELRGQTGWFPESYVEPCDETGE 321
           VK+  E GWL GEL G+ G FP+++V+      E
Sbjct: 29  VKKLQEEGWLEGELNGRRGMFPDNFVKEIKRETE 62

>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A Length = 64

 Score = 83.8 bits (208), Expect = 7e-21
 Identities = 20/56 (35%), Positives = 32/56 (57%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
              R ++ +   N DEL+F+ G+II +  K+  E GW  GEL G+ G FP+++   
Sbjct: 7   EYCRTLFPYTGTNEDELTFREGEIIHLISKETGEAGWWKGELNGKEGVFPDNFAVQ 62

>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A Length = 64

 Score = 47.6 bits (114), Expect = 8e-08
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 289 KQNAEPGWLAGELRGQTGWFPESYVEP 315
           K+  E GW  GEL G+ G FP+++   
Sbjct: 36  KETGEAGWWKGELNGKEGVFPDNFAVQ 62

>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens} Length = 69

 Score = 83.1 bits (206), Expect = 1e-20
 Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 2/64 (3%)

Query: 165 GVSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           G S  + YRA+Y++ ++N DEL    GDI+ V + +  E GW   E  GQ G+ P SY+E
Sbjct: 4   GSSGAQEYRALYDYTAQNPDELDLSAGDILEV-ILEG-EDGWWTVERNGQRGFVPGSYLE 61

Query: 225 PCDE 228
               
Sbjct: 62  KLSG 65

>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens} Length = 69

 Score = 50.3 bits (121), Expect = 1e-08
 Identities = 11/47 (23%), Positives = 21/47 (44%), Gaps = 1/47 (2%)

Query: 118 KYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTARF 163
           + Y A Y Y +  P +L  +  +++ V  + E+ WWT     +    
Sbjct: 9   QEYRALYDYTAQNPDELDLSAGDILEVILEGEDGWWTVERNGQRGFV 55

>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens} Length = 69

 Score = 48.0 bits (115), Expect = 7e-08
 Identities = 13/36 (36%), Positives = 17/36 (47%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE 318
           G ++ V    E GW   E  GQ G+ P SY+E    
Sbjct: 30  GDILEVILEGEDGWWTVERNGQRGFVPGSYLEKLSG 65

>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens} Length = 73

 Score = 82.8 bits (205), Expect = 2e-20
 Identities = 20/62 (32%), Positives = 35/62 (56%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET 229
              + I+ + ++N DEL+ + GDI+ +  K   + GW  GEL G+ G FP+++V+     
Sbjct: 10  DYCKVIFPYEAQNDDELTIKEGDIVTLINKDCIDVGWWEGELNGRRGVFPDNFVKLLPPD 69

Query: 230 GE 231
            E
Sbjct: 70  FE 71

>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens} Length = 73

 Score = 48.1 bits (115), Expect = 7e-08
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 289 KQNAEPGWLAGELRGQTGWFPESYVEPCDETGE 321
           K   + GW  GEL G+ G FP+++V+      E
Sbjct: 39  KDCIDVGWWEGELNGRRGVFPDNFVKLLPPDFE 71

>2o2o_A SH3-domain kinase-binding protein 1; CIN85, protein binding; NMR {Homo sapiens} Length = 92

 Score = 82.9 bits (205), Expect = 3e-20
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 3/82 (3%)

Query: 164 RGVSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYV 223
           RG    RR +  + ++ +N DEL  + GDII V V +  E GW  G L G+TG FP +++
Sbjct: 13  RGERRRRRCQVAFSYLPQNDDELELKVGDIIEV-VGEV-EEGWWEGVLNGKTGMFPSNFI 70

Query: 224 EPC-DETGEVVPGTELPGDKHH 244
           +    E+ E+    +     HH
Sbjct: 71  KELSGESDELGISQDEHHHHHH 92

>2o2o_A SH3-domain kinase-binding protein 1; CIN85, protein binding; NMR {Homo sapiens} Length = 92

 Score = 50.1 bits (120), Expect = 2e-08
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPC-DETGEVVPGTELPGDKHH 334
           G ++ V    E GW  G L G+TG FP ++++    E+ E+    +     HH
Sbjct: 40  GDIIEVVGEVEEGWWEGVLNGKTGMFPSNFIKELSGESDELGISQDEHHHHHH 92

>2o2o_A SH3-domain kinase-binding protein 1; CIN85, protein binding; NMR {Homo sapiens} Length = 92

 Score = 48.6 bits (116), Expect = 7e-08
 Identities = 10/47 (21%), Positives = 19/47 (40%), Gaps = 1/47 (2%)

Query: 118 KYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEND-WWTGTIGDRTARF 163
           +    A+ Y      +L     ++I V  +  + WW G +  +T  F
Sbjct: 19  RRCQVAFSYLPQNDDELELKVGDIIEVVGEVEEGWWEGVLNGKTGMF 65

>1ujy_A RHO guanine nucleotide exchange factor 6; structural genomics, SH3 domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 76

 Score = 82.0 bits (203), Expect = 4e-20
 Identities = 27/70 (38%), Positives = 34/70 (48%), Gaps = 2/70 (2%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC 226
           S     +A + F   N DELS   GDII V   +  E GW  G L G+TGWFP +YV   
Sbjct: 8   SHQLIVKARFNFKQTNEDELSVCKGDIIYVTRVE--EGGWWEGTLNGRTGWFPSNYVREI 65

Query: 227 DETGEVVPGT 236
             +    P +
Sbjct: 66  KSSERSGPSS 75

>1ujy_A RHO guanine nucleotide exchange factor 6; structural genomics, SH3 domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 76

 Score = 50.0 bits (120), Expect = 2e-08
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 109 KTLANMMSDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTARF 163
            + ++        A + +  T   +L+  + ++IYVT+  E  WW GT+  RT  F
Sbjct: 2   SSGSSGSHQLIVKARFNFKQTNEDELSVCKGDIIYVTRVEEGGWWEGTLNGRTGWF 57

>1ujy_A RHO guanine nucleotide exchange factor 6; structural genomics, SH3 domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 76

 Score = 50.0 bits (120), Expect = 2e-08
 Identities = 16/44 (36%), Positives = 23/44 (52%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVPGT 326
           G ++ V +  E GW  G L G+TGWFP +YV     +    P +
Sbjct: 32  GDIIYVTRVEEGGWWEGTLNGRTGWFPSNYVREIKSSERSGPSS 75

>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A Length = 69

 Score = 81.9 bits (203), Expect = 4e-20
 Identities = 19/60 (31%), Positives = 34/60 (56%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET 229
              + I+ + ++N DEL+ + GDI+ +  K   + GW  GEL G+ G FP+++V+     
Sbjct: 3   DYCKVIFPYEAQNDDELTIKEGDIVTLINKDCIDVGWWEGELNGRRGVFPDNFVKLLPPL 62

>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A Length = 69

 Score = 47.6 bits (114), Expect = 8e-08
 Identities = 11/31 (35%), Positives = 17/31 (54%)

Query: 289 KQNAEPGWLAGELRGQTGWFPESYVEPCDET 319
           K   + GW  GEL G+ G FP+++V+     
Sbjct: 32  KDCIDVGWWEGELNGRRGVFPDNFVKLLPPL 62

>2da9_A SH3-domain kinase binding protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 70

 Score = 81.2 bits (201), Expect = 7e-20
 Identities = 19/57 (33%), Positives = 34/57 (59%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC 226
              + I+ + ++N DEL+ + GDI+ +  K   + GW  GEL G+ G FP+++V+  
Sbjct: 8   DYCKVIFPYEAQNDDELTIKEGDIVTLINKDCIDVGWWEGELNGRRGVFPDNFVKLL 64

>2da9_A SH3-domain kinase binding protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 70

 Score = 46.5 bits (111), Expect = 2e-07
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query: 289 KQNAEPGWLAGELRGQTGWFPESYVEPC 316
           K   + GW  GEL G+ G FP+++V+  
Sbjct: 37  KDCIDVGWWEGELNGRRGVFPDNFVKLL 64

>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 68

 Score = 81.1 bits (201), Expect = 9e-20
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
           S    +R ++ FV    +EL   PG+I+ V +K+     W      GQ G  P +Y+EP
Sbjct: 5   SSGEAHRVLFGFVPETKEELQVMPGNIVFV-LKKG-NDNWATVMFNGQKGLVPCNYLEP 61

>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 68

 Score = 48.7 bits (117), Expect = 4e-08
 Identities = 9/46 (19%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 116 SDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEND-WWTGTIGDRT 160
           S + +   + +      +L      +++V KK ND W T     + 
Sbjct: 6   SGEAHRVLFGFVPETKEELQVMPGNIVFVLKKGNDNWATVMFNGQK 51

>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 68

 Score = 46.8 bits (112), Expect = 2e-07
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEP 315
           G +V V +     W      GQ G  P +Y+EP
Sbjct: 29  GNIVFVLKKGNDNWATVMFNGQKGLVPCNYLEP 61

>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 79

 Score = 80.9 bits (200), Expect = 1e-19
 Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 2/68 (2%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC 226
           S  R  +A+Y F +R  DEL+ + GDI+++  K+  E GW  G L G+ G FP +YVE  
Sbjct: 5   SSGRLCKALYSFQARQDDELNLEKGDIVIIHEKK--EEGWWFGSLNGKKGHFPAAYVEEL 62

Query: 227 DETGEVVP 234
                   
Sbjct: 63  PSNAGNTA 70

>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 79

 Score = 48.1 bits (115), Expect = 8e-08
 Identities = 14/42 (33%), Positives = 19/42 (45%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVP 324
           G +V + +  E GW  G L G+ G FP +YVE          
Sbjct: 29  GDIVIIHEKKEEGWWFGSLNGKKGHFPAAYVEELPSNAGNTA 70

>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 79

 Score = 47.7 bits (114), Expect = 1e-07
 Identities = 10/49 (20%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 116 SDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTARF 163
           S +   A Y + + +  +L   + +++ + +K E  WW G++  +   F
Sbjct: 6   SGRLCKALYSFQARQDDELNLEKGDIVIIHEKKEEGWWFGSLNGKKGHF 54

>2kbt_A Chimera of proto-oncogene VAV, linker, immunoglobulin G-binding protein G; sortase, protein ligation, intein, inset, solubility enhancement; NMR {Mus musculus} Length = 142

 Score = 82.0 bits (202), Expect = 2e-19
 Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 7/108 (6%)

Query: 165 GVSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           G   +   +A Y+F +R+  ELS + GDII + + +  + GW  GE+ G+ GWFP +YVE
Sbjct: 1   GPGTFGTAKARYDFCARDRSELSLKEGDIIKI-LNKKGQQGWWRGEIYGRIGWFPSNYVE 59

Query: 225 PCDETGEVVPGTELPGDKHHLE------LIAEVPENISDSGGSGIAVE 266
                     G        +        L  E      D+  +    +
Sbjct: 60  EDYSEYLPETGGGSGSSMTYKLILNGKTLKGETTTEAVDAATAEKVFK 107

>2kbt_A Chimera of proto-oncogene VAV, linker, immunoglobulin G-binding protein G; sortase, protein ligation, intein, inset, solubility enhancement; NMR {Mus musculus} Length = 142

 Score = 45.8 bits (108), Expect = 2e-06
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)

Query: 283 GTVVPV-KQNAEPGWLAGELRGQTGWFPESYVEPCDETGE 321
           G ++ +  +  + GW  GE+ G+ GWFP +YVE       
Sbjct: 27  GDIIKILNKKGQQGWWRGEIYGRIGWFPSNYVEEDYSEYL 66

>2e5k_A Suppressor of T-cell receptor signaling 1; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 94

 Score = 80.6 bits (199), Expect = 2e-19
 Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 4/80 (5%)

Query: 154 GTIGDRTARFRGVSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVK--QNAEPGWLAG-- 209
           G+ G   +R    + +   + IY +  +N DEL   PGD I +      +   GW+ G  
Sbjct: 1   GSSGSSGSRDIRFANHETLQVIYPYTPQNDDELELVPGDFIFMSPMEQTSTSEGWIYGTS 60

Query: 210 ELRGQTGWFPESYVEPCDET 229
              G +G  PE+Y+   DE 
Sbjct: 61  LTTGCSGLLPENYITKADEC 80

>2e5k_A Suppressor of T-cell receptor signaling 1; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 94

 Score = 42.5 bits (100), Expect = 1e-05
 Identities = 10/33 (30%), Positives = 16/33 (48%), Gaps = 2/33 (6%)

Query: 289 KQNAEPGWLAG--ELRGQTGWFPESYVEPCDET 319
           + +   GW+ G     G +G  PE+Y+   DE 
Sbjct: 48  QTSTSEGWIYGTSLTTGCSGLLPENYITKADEC 80

>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae} Length = 54

 Score = 79.1 bits (196), Expect = 3e-19
 Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 1/54 (1%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
              AIY + ++  DE+S  PGDII V ++ +   GW  GE  G  G FP SY +
Sbjct: 2   AMEAIYAYEAQGDDEISIDPGDIITV-IRGDDGSGWTYGECDGLKGLFPTSYCK 54

>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae} Length = 54

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 8/44 (18%), Positives = 19/44 (43%), Gaps = 2/44 (4%)

Query: 122 AAYPYDSTEPGDLTFNQDEVIYVTKKEND--WWTGTIGDRTARF 163
           A Y Y++    +++ +  ++I V + ++   W  G        F
Sbjct: 5   AIYAYEAQGDDEISIDPGDIITVIRGDDGSGWTYGECDGLKGLF 48

>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae} Length = 54

 Score = 45.2 bits (108), Expect = 4e-07
 Identities = 10/27 (37%), Positives = 14/27 (51%)

Query: 288 VKQNAEPGWLAGELRGQTGWFPESYVE 314
           ++ +   GW  GE  G  G FP SY +
Sbjct: 28  IRGDDGSGWTYGECDGLKGLFPTSYCK 54

>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 68

 Score = 78.8 bits (195), Expect = 5e-19
 Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC 226
           S  + +RA+Y F  R  DEL F+ GDII +    + +  W  G  +G+TG  P +YV   
Sbjct: 5   SSGKVFRALYTFEPRTPDELYFEEGDIIYI-TDMS-DTNWWKGTSKGRTGLIPSNYVAEQ 62

Query: 227 DE 228
             
Sbjct: 63  SG 64

>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 68

 Score = 51.8 bits (125), Expect = 3e-09
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 116 SDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTIGDRT 160
           S K + A Y ++   P +L F + ++IY+T   + +WW GT   RT
Sbjct: 6   SGKVFRALYTFEPRTPDELYFEEGDIIYITDMSDTNWWKGTSKGRT 51

>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 68

 Score = 46.8 bits (112), Expect = 1e-07
 Identities = 9/36 (25%), Positives = 17/36 (47%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE 318
           G ++ +   ++  W  G  +G+TG  P +YV     
Sbjct: 29  GDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAEQSG 64

>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A Length = 68

 Score = 78.8 bits (195), Expect = 6e-19
 Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC 226
           S  R  RA ++F ++   EL  Q GDI+ +  KQ  +  W  GE  G+ G FP +Y+E  
Sbjct: 5   SSGRPARAKFDFKAQTLKELPLQKGDIVYI-YKQI-DQNWYEGEHHGRVGIFPRTYIELL 62

Query: 227 DE 228
             
Sbjct: 63  SG 64

>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A Length = 68

 Score = 48.8 bits (117), Expect = 3e-08
 Identities = 8/46 (17%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 116 SDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTIGDRT 160
           S +   A + + +    +L   + +++Y+ K+ + +W+ G    R 
Sbjct: 6   SGRPARAKFDFKAQTLKELPLQKGDIVYIYKQIDQNWYEGEHHGRV 51

>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A Length = 68

 Score = 47.2 bits (113), Expect = 1e-07
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE 318
           G +V + +  +  W  GE  G+ G FP +Y+E    
Sbjct: 29  GDIVYIYKQIDQNWYEGEHHGRVGIFPRTYIELLSG 64

>3u23_A CD2-associated protein; structural genomics, structural genomics consortium, SGC, BE barrel, adaptor protein, protein binding; 1.11A {Homo sapiens} PDB: 2krn_A Length = 65

 Score = 78.8 bits (195), Expect = 6e-19
 Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 2/63 (3%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC 226
           S+ R+ + ++E++ +N DEL  + GDII +  ++  E GW +G L  + G FP ++V+  
Sbjct: 5   SKKRQCKVLFEYIPQNEDELELKVGDIIDI-NEEV-EEGWWSGTLNNKLGLFPSNFVKEL 62

Query: 227 DET 229
           + T
Sbjct: 63  EVT 65

>3u23_A CD2-associated protein; structural genomics, structural genomics consortium, SGC, BE barrel, adaptor protein, protein binding; 1.11A {Homo sapiens} PDB: 2krn_A Length = 65

 Score = 50.3 bits (121), Expect = 1e-08
 Identities = 9/47 (19%), Positives = 21/47 (44%), Gaps = 1/47 (2%)

Query: 118 KYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTARF 163
           +     + Y      +L     ++I + ++ E  WW+GT+ ++   F
Sbjct: 8   RQCKVLFEYIPQNEDELELKVGDIIDINEEVEEGWWSGTLNNKLGLF 54

>3u23_A CD2-associated protein; structural genomics, structural genomics consortium, SGC, BE barrel, adaptor protein, protein binding; 1.11A {Homo sapiens} PDB: 2krn_A Length = 65

 Score = 47.6 bits (114), Expect = 1e-07
 Identities = 11/37 (29%), Positives = 21/37 (56%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET 319
           G ++ + +  E GW +G L  + G FP ++V+  + T
Sbjct: 29  GDIIDINEEVEEGWWSGTLNNKLGLFPSNFVKELEVT 65

>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 78

 Score = 78.9 bits (195), Expect = 7e-19
 Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 2/73 (2%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC 226
           S  RR +A+ +F   + DEL F+  DII +  ++  +     GEL G  GWFP  +VE  
Sbjct: 5   SSGRRAKALLDFERHDDDELGFRKNDIITIISQK--DEHCWVGELNGLRGWFPAKFVEVL 62

Query: 227 DETGEVVPGTELP 239
           DE  +       P
Sbjct: 63  DERSKEYSIASGP 75

>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 78

 Score = 48.9 bits (117), Expect = 4e-08
 Identities = 8/49 (16%), Positives = 22/49 (44%), Gaps = 1/49 (2%)

Query: 116 SDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTIGDRTARF 163
           S +   A   ++  +  +L F ++++I +  +++   W G +      F
Sbjct: 6   SGRRAKALLDFERHDDDELGFRKNDIITIISQKDEHCWVGELNGLRGWF 54

>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 78

 Score = 46.9 bits (112), Expect = 2e-07
 Identities = 13/47 (27%), Positives = 19/47 (40%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVPGTELP 329
             ++ +    +     GEL G  GWFP  +VE  DE  +       P
Sbjct: 29  NDIITIISQKDEHCWVGELNGLRGWFPAKFVEVLDERSKEYSIASGP 75

>1spk_A RSGI RUH-010, riken cDNA 1300006M19; structural genomics, SH3 domain, five-stranded barrel, mouse cDNA; NMR {Mus musculus} SCOP: b.34.2.1 Length = 72

 Score = 78.6 bits (194), Expect = 9e-19
 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 4/65 (6%)

Query: 167 SEYRRYRAIYEFVS-RNGDELSFQPGDIIMVPVKQNAEPGWLAGELR--GQTGWFPESYV 223
           S  ++ + I+   +  N   LSF  GD++ + +    + GWL GE       GWFP SY 
Sbjct: 5   SSGQKVKTIFPHTAGNNKTLLSFAQGDVLTL-LIPEEKDGWLYGEHDTTKARGWFPSSYT 63

Query: 224 EPCDE 228
           +    
Sbjct: 64  KLLSG 68

>1spk_A RSGI RUH-010, riken cDNA 1300006M19; structural genomics, SH3 domain, five-stranded barrel, mouse cDNA; NMR {Mus musculus} SCOP: b.34.2.1 Length = 72

 Score = 44.7 bits (106), Expect = 1e-06
 Identities = 11/33 (33%), Positives = 14/33 (42%), Gaps = 2/33 (6%)

Query: 288 VKQNAEPGWLAGELR--GQTGWFPESYVEPCDE 318
           +    + GWL GE       GWFP SY +    
Sbjct: 36  LIPEEKDGWLYGEHDTTKARGWFPSSYTKLLSG 68

>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 62

 Score = 78.0 bits (193), Expect = 1e-18
 Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 2/62 (3%)

Query: 166 VSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
           + +  +  A++ + +   ++L FQ GDII+V + +     WL GE +G+ G FP+ +VE 
Sbjct: 2   LKKGSQVEALFSYEATQPEDLEFQEGDIILV-LSKV-NEEWLEGESKGKVGIFPKVFVED 59

Query: 226 CD 227
             
Sbjct: 60  SA 61

>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 62

 Score = 54.5 bits (132), Expect = 3e-10
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 118 KYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTIGDRTARF 163
               A + Y++T+P DL F + ++I V  K N +W  G    +   F
Sbjct: 6   SQVEALFSYEATQPEDLEFQEGDIILVLSKVNEEWLEGESKGKVGIF 52

>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 62

 Score = 48.0 bits (115), Expect = 6e-08
 Identities = 12/35 (34%), Positives = 18/35 (51%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD 317
           G ++ V       WL GE +G+ G FP+ +VE   
Sbjct: 27  GDIILVLSKVNEEWLEGESKGKVGIFPKVFVEDSA 61

>2kxc_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 1; IRTKS-SH3, espfu, complex structure, protein binding; NMR {Homo sapiens} Length = 67

 Score = 77.7 bits (192), Expect = 1e-18
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 4/62 (6%)

Query: 170 RRYRAIYEFV-SRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR--GQTGWFPESYVEPC 226
           ++ + I+      N   LSF  GD+I + + +  + GWL GE       GWFP SY +  
Sbjct: 7   QKVKTIFPHTAGSNKTLLSFAQGDVITLLIPEEKD-GWLYGEHDVSKARGWFPSSYTKLL 65

Query: 227 DE 228
           +E
Sbjct: 66  EE 67

>2kxc_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 1; IRTKS-SH3, espfu, complex structure, protein binding; NMR {Homo sapiens} Length = 67

 Score = 45.0 bits (107), Expect = 7e-07
 Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 2/33 (6%)

Query: 288 VKQNAEPGWLAGELR--GQTGWFPESYVEPCDE 318
           +    + GWL GE       GWFP SY +  +E
Sbjct: 35  LIPEEKDGWLYGEHDVSKARGWFPSSYTKLLEE 67

>2dyb_A Neutrophil cytosol factor 4; P40(PHOX), NADPH oxidase, oxidoreductase; HET: CAF; 3.15A {Homo sapiens} Length = 341

 Score = 83.9 bits (206), Expect = 2e-18
 Identities = 34/161 (21%), Positives = 67/161 (41%), Gaps = 14/161 (8%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET 229
            R  A+++F   +  EL+F+ GD+I +  + N    WL G +RG TG FP S+V+   + 
Sbjct: 175 PRAEALFDFTGNSKLELNFKAGDVIFLLSRIN--KDWLEGTVRGATGIFPLSFVKILKDF 232

Query: 230 GEVVPGTELPGDKHHLELIAEVPEN--ISDSGGSGIAVEEGPGIPADIPSPIMGL----- 282
            E    T      ++ + I+ + +     D   + +  +       +     + L     
Sbjct: 233 PEEDDPTNWLRCYYYEDTISTIKDIAVEEDLSSTPLLKDLLELTRREFQREDIALNYRDA 292

Query: 283 -GTVVPVKQNAEPGWLAGELRG---QTGWFP-ESYVEPCDE 318
            G +V +  + +   +  + RG   Q   FP + ++   D 
Sbjct: 293 EGDLVRLLSDEDVALMVRQARGLPSQKRLFPWKLHITQKDN 333

>2dyb_A Neutrophil cytosol factor 4; P40(PHOX), NADPH oxidase, oxidoreductase; HET: CAF; 3.15A {Homo sapiens} Length = 341

 Score = 50.0 bits (118), Expect = 5e-07
 Identities = 28/196 (14%), Positives = 48/196 (24%), Gaps = 32/196 (16%)

Query: 169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE 228
           YRRYR  +   S+  +                   P   A    G      E  +   + 
Sbjct: 58  YRRYRQFHALQSKLEERFGPDSKS----SALAXTLPTLPAKVYVGVKQEIAEMRIPALNA 113

Query: 229 -TGEVVPGTELPGDKHHLELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGL----- 282
               ++           + +        S+     +             SP         
Sbjct: 114 YMKSLLSLPVWVLMDEDVRIFFYQSPYDSEQVPQALRRLRPRTRKVKSVSPQGNSVDRMA 173

Query: 283 ----------------------GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETG 320
                                 G V+ +       WL G +RG TG FP S+V+   +  
Sbjct: 174 APRAEALFDFTGNSKLELNFKAGDVIFLLSRINKDWLEGTVRGATGIFPLSFVKILKDFP 233

Query: 321 EVVPGTELPGDKHHLE 336
           E    T      ++ +
Sbjct: 234 EEDDPTNWLRCYYYED 249

>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A Length = 60

 Score = 77.2 bits (191), Expect = 2e-18
 Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 2/60 (3%)

Query: 166 VSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
           + ++ R  A+++F   +  EL+F+ GD+I + + +     WL G +RG TG FP S+V+ 
Sbjct: 1   LIKHMRAEALFDFTGNSKLELNFKAGDVIFL-LSRI-NKDWLEGTVRGATGIFPLSFVKI 58

>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A Length = 60

 Score = 55.2 bits (134), Expect = 1e-10
 Identities = 12/51 (23%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 114 MMSDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTIGDRTARF 163
           ++      A + +      +L F   +VI++  + N DW  GT+   T  F
Sbjct: 1   LIKHMRAEALFDFTGNSKLELNFKAGDVIFLLSRINKDWLEGTVRGATGIF 51

>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A Length = 60

 Score = 44.0 bits (105), Expect = 1e-06
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEP 315
           G V+ +       WL G +RG TG FP S+V+ 
Sbjct: 26  GDVIFLLSRINKDWLEGTVRGATGIFPLSFVKI 58

>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A Length = 64

 Score = 77.3 bits (191), Expect = 2e-18
 Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 2/60 (3%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET 229
              RA + F   N DELSF  GD+I V  +   E GW  G   G+TGWFP +YV     +
Sbjct: 7   LVVRAKFNFQQTNEDELSFSKGDVIHV-TRVE-EGGWWEGTHNGRTGWFPSNYVREIKPS 64

>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A Length = 64

 Score = 49.9 bits (120), Expect = 1e-08
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 116 SDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTARF 163
           S     A + +  T   +L+F++ +VI+VT+  E  WW GT   RT  F
Sbjct: 5   SQLVVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWEGTHNGRTGWF 53

>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A Length = 64

 Score = 46.5 bits (111), Expect = 2e-07
 Identities = 15/37 (40%), Positives = 20/37 (54%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET 319
           G V+ V +  E GW  G   G+TGWFP +YV     +
Sbjct: 28  GDVIHVTRVEEGGWWEGTHNGRTGWFPSNYVREIKPS 64

>1wi7_A SH3-domain kinase binding protein 1; beta barrel, SH3KBP1, RUK, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} Length = 68

 Score = 76.9 bits (190), Expect = 2e-18
 Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 2/56 (3%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
           RR +  + ++ +N DEL  + GDII V V +  E GW  G L G+TG FP ++++ 
Sbjct: 8   RRCQVAFSYLPQNDDELELKVGDIIEV-VGEV-EEGWWEGVLNGKTGMFPSNFIKE 61

>1wi7_A SH3-domain kinase binding protein 1; beta barrel, SH3KBP1, RUK, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} Length = 68

 Score = 48.8 bits (117), Expect = 3e-08
 Identities = 11/49 (22%), Positives = 20/49 (40%), Gaps = 1/49 (2%)

Query: 116 SDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEND-WWTGTIGDRTARF 163
           S +    A+ Y      +L     ++I V  +  + WW G +  +T  F
Sbjct: 6   SGRRCQVAFSYLPQNDDELELKVGDIIEVVGEVEEGWWEGVLNGKTGMF 54

>1wi7_A SH3-domain kinase binding protein 1; beta barrel, SH3KBP1, RUK, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} Length = 68

 Score = 45.7 bits (109), Expect = 4e-07
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEP 315
           G ++ V    E GW  G L G+TG FP ++++ 
Sbjct: 29  GDIIEVVGEVEEGWWEGVLNGKTGMFPSNFIKE 61

>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A Length = 59

 Score = 76.5 bits (189), Expect = 3e-18
 Identities = 25/56 (44%), Positives = 30/56 (53%), Gaps = 2/56 (3%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
              RA + F   N DELSF  GD+I V   +  E GW  G   G+TGWFP +YV  
Sbjct: 5   SVVRAKFNFQQTNEDELSFSKGDVIHVTRVE--EGGWWEGTHNGRTGWFPSNYVRE 58

>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A Length = 59

 Score = 49.9 bits (120), Expect = 1e-08
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 119 YYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTARF 163
              A + +  T   +L+F++ +VI+VT+  E  WW GT   RT  F
Sbjct: 6   VVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWEGTHNGRTGWF 51

>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A Length = 59

 Score = 45.7 bits (109), Expect = 3e-07
 Identities = 15/33 (45%), Positives = 19/33 (57%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEP 315
           G V+ V +  E GW  G   G+TGWFP +YV  
Sbjct: 26  GDVIHVTRVEEGGWWEGTHNGRTGWFPSNYVRE 58

>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens} Length = 65

 Score = 76.9 bits (190), Expect = 3e-18
 Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 2/56 (3%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
           +  R  ++F +++  EL+ Q GDI+ +  K+  +  WL GE  G+ G FP +YVE 
Sbjct: 2   KAARLKFDFQAQSPKELTLQKGDIVYI-HKEV-DKNWLEGEHHGRLGIFPANYVEV 55

>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens} Length = 65

 Score = 49.5 bits (119), Expect = 2e-08
 Identities = 10/47 (21%), Positives = 22/47 (46%), Gaps = 1/47 (2%)

Query: 118 KYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTIGDRTARF 163
           K     + + +  P +LT  + +++Y+ K+ + +W  G    R   F
Sbjct: 2   KAARLKFDFQAQSPKELTLQKGDIVYIHKEVDKNWLEGEHHGRLGIF 48

>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens} Length = 65

 Score = 45.7 bits (109), Expect = 5e-07
 Identities = 13/33 (39%), Positives = 19/33 (57%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEP 315
           G +V + +  +  WL GE  G+ G FP +YVE 
Sbjct: 23  GDIVYIHKEVDKNWLEGEHHGRLGIFPANYVEV 55

>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A Length = 58

 Score = 76.4 bits (189), Expect = 3e-18
 Identities = 19/60 (31%), Positives = 37/60 (61%), Gaps = 2/60 (3%)

Query: 168 EYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD 227
           E +  +A+++F  +   EL+F+ GD+I + + ++ +P W  G+L  + G FP +YV P +
Sbjct: 1   ETKFVQALFDFNPQESGELAFKRGDVITL-INKD-DPNWWEGQLNNRRGIFPSNYVCPYN 58

>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A Length = 58

 Score = 55.6 bits (135), Expect = 1e-10
 Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 1/47 (2%)

Query: 118 KYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTIGDRTARF 163
           K+  A + ++  E G+L F + +VI +  K++ +WW G + +R   F
Sbjct: 3   KFVQALFDFNPQESGELAFKRGDVITLINKDDPNWWEGQLNNRRGIF 49

>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A Length = 58

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 12/35 (34%), Positives = 19/35 (54%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD 317
           G V+ +    +P W  G+L  + G FP +YV P +
Sbjct: 24  GDVITLINKDDPNWWEGQLNNRRGIFPSNYVCPYN 58

>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens} Length = 58

 Score = 76.0 bits (188), Expect = 4e-18
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           + +RA+Y F  R  DEL F+ GDII +    + +  W  G  +G+TG  P +YV 
Sbjct: 4   KVFRALYTFEPRTPDELYFEEGDIIYI-TDMS-DTNWWKGTSKGRTGLIPSNYVA 56

>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens} Length = 58

 Score = 54.8 bits (133), Expect = 2e-10
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 118 KYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTIGDRTARF 163
           K + A Y ++   P +L F + ++IY+T   + +WW GT   RT   
Sbjct: 4   KVFRALYTFEPRTPDELYFEEGDIIYITDMSDTNWWKGTSKGRTGLI 50

>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens} Length = 58

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 9/32 (28%), Positives = 17/32 (53%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVE 314
           G ++ +   ++  W  G  +G+TG  P +YV 
Sbjct: 25  GDIIYITDMSDTNWWKGTSKGRTGLIPSNYVA 56

>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 71

 Score = 76.6 bits (189), Expect = 4e-18
 Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 2/66 (3%)

Query: 165 GVSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           G S   +Y  +  + S++ DE+ F+ G  + V +++N   GW      G+ GW P SY++
Sbjct: 4   GSSGEEKYVTVQPYTSQSKDEIGFEKGVTVEV-IRKN-LEGWWYIRYLGKEGWAPASYLK 61

Query: 225 PCDETG 230
              ++G
Sbjct: 62  KAKDSG 67

>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 71

 Score = 51.9 bits (125), Expect = 3e-09
 Identities = 9/46 (19%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 116 SDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRT 160
            ++ Y+   PY S    ++ F +   + V +K    WW      + 
Sbjct: 7   GEEKYVTVQPYTSQSKDEIGFEKGVTVEVIRKNLEGWWYIRYLGKE 52

>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 71

 Score = 46.5 bits (111), Expect = 2e-07
 Identities = 12/38 (31%), Positives = 18/38 (47%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETG 320
           G  V V +    GW      G+ GW P SY++   ++G
Sbjct: 30  GVTVEVIRKNLEGWWYIRYLGKEGWAPASYLKKAKDSG 67

>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural genomics, structural genomics consortium, SGC, BE barrel; HET: EDT; 1.50A {Homo sapiens} Length = 67

 Score = 76.2 bits (188), Expect = 4e-18
 Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 4/61 (6%)

Query: 170 RRYRAIYEFVS-RNGDELSFQPGDIIMVPVKQNAEPGWLAGELR--GQTGWFPESYVEPC 226
            R +AI+   +  N   LSF+ GD+I + V + A  GW  GE       GWFP SY    
Sbjct: 8   MRVKAIFSHAAGDNSTLLSFKEGDLITLLVPE-ARDGWHYGESEKTKMRGWFPFSYTRVL 66

Query: 227 D 227
           D
Sbjct: 67  D 67

>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural genomics, structural genomics consortium, SGC, BE barrel; HET: EDT; 1.50A {Homo sapiens} Length = 67

 Score = 43.1 bits (102), Expect = 3e-06
 Identities = 12/32 (37%), Positives = 13/32 (40%), Gaps = 2/32 (6%)

Query: 288 VKQNAEPGWLAGELR--GQTGWFPESYVEPCD 317
           +   A  GW  GE       GWFP SY    D
Sbjct: 36  LVPEARDGWHYGESEKTKMRGWFPFSYTRVLD 67

>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR {Homo sapiens} Length = 65

 Score = 76.1 bits (188), Expect = 5e-18
 Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 2/60 (3%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET 229
           R+ + ++E++ +N DEL  + GDII +  ++  E GW +G L  + G FP ++V+  +  
Sbjct: 2   RQCKVLFEYIPQNEDELELKVGDIIDI-NEEV-EEGWWSGTLNNKLGLFPSNFVKELELE 59

>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR {Homo sapiens} Length = 65

 Score = 49.9 bits (120), Expect = 1e-08
 Identities = 8/47 (17%), Positives = 21/47 (44%), Gaps = 1/47 (2%)

Query: 118 KYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEND-WWTGTIGDRTARF 163
           +     + Y      +L     ++I + ++  + WW+GT+ ++   F
Sbjct: 2   RQCKVLFEYIPQNEDELELKVGDIIDINEEVEEGWWSGTLNNKLGLF 48

>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR {Homo sapiens} Length = 65

 Score = 46.1 bits (110), Expect = 3e-07
 Identities = 10/37 (27%), Positives = 20/37 (54%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET 319
           G ++ + +  E GW +G L  + G FP ++V+  +  
Sbjct: 23  GDIIDINEEVEEGWWSGTLNNKLGLFPSNFVKELELE 59

>1gbq_A GRB2; complex (signal transduction/peptide), SH3 domain; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 1gbr_A 2gbq_A 3gbq_A 4gbq_A Length = 74

 Score = 76.2 bits (188), Expect = 5e-18
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 1/71 (1%)

Query: 164 RGVSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYV 223
           R         A Y+F +   DELSF+ GDI+ V + +  +  W   EL G+ G+ P++Y+
Sbjct: 4   RASVGSMEAIAKYDFKATADDELSFKRGDILKV-LNEECDQNWYKAELNGKDGFIPKNYI 62

Query: 224 EPCDETGEVVP 234
           E       +V 
Sbjct: 63  EMKPHPEFIVT 73

>1gbq_A GRB2; complex (signal transduction/peptide), SH3 domain; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 1gbr_A 2gbq_A 3gbq_A 4gbq_A Length = 74

 Score = 44.2 bits (105), Expect = 2e-06
 Identities = 9/37 (24%), Positives = 18/37 (48%)

Query: 288 VKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVP 324
           + +  +  W   EL G+ G+ P++Y+E       +V 
Sbjct: 37  LNEECDQNWYKAELNGKDGFIPKNYIEMKPHPEFIVT 73

>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus} Length = 68

 Score = 76.1 bits (188), Expect = 6e-18
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC 226
           S   R +A+  +  +N  +L F  GD+I++  +Q  +  W  GE+ G +G FP S VE  
Sbjct: 5   SSGPRAKALCNYRGKNPGDLKFNKGDVILL-RRQL-DENWYQGEINGVSGIFPASSVEVI 62

Query: 227 DE 228
             
Sbjct: 63  SG 64

>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus} Length = 68

 Score = 50.7 bits (122), Expect = 7e-09
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 119 YYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTIGDRTARF 163
              A   Y    PGDL FN+ +VI + ++ + +W+ G I   +  F
Sbjct: 9   RAKALCNYRGKNPGDLKFNKGDVILLRRQLDENWYQGEINGVSGIF 54

>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus} Length = 68

 Score = 44.5 bits (106), Expect = 1e-06
 Identities = 12/36 (33%), Positives = 19/36 (52%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE 318
           G V+ +++  +  W  GE+ G +G FP S VE    
Sbjct: 29  GDVILLRRQLDENWYQGEINGVSGIFPASSVEVISG 64

>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens} Length = 58

 Score = 75.7 bits (187), Expect = 7e-18
 Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 2/58 (3%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE 228
                +++ +++ DEL+   G+II    K+  + GW  G++ G+ G FP+++V    +
Sbjct: 3   EAIVEFDYQAQHDDELTISVGEIITNIRKE--DGGWWEGQINGRRGLFPDNFVREIKK 58

>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens} Length = 58

 Score = 49.1 bits (118), Expect = 2e-08
 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 121 IAAYPYDSTEPGDLTFNQDEVIYVTKKEND-WWTGTIGDRTARF 163
           I  + Y +    +LT +  E+I   +KE+  WW G I  R   F
Sbjct: 5   IVEFDYQAQHDDELTISVGEIITNIRKEDGGWWEGQINGRRGLF 48

>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens} Length = 58

 Score = 47.1 bits (113), Expect = 1e-07
 Identities = 9/36 (25%), Positives = 20/36 (55%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE 318
           G ++   +  + GW  G++ G+ G FP+++V    +
Sbjct: 23  GEIITNIRKEDGGWWEGQINGRRGLFPDNFVREIKK 58

>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A* Length = 303

 Score = 82.0 bits (201), Expect = 7e-18
 Identities = 32/175 (18%), Positives = 59/175 (33%), Gaps = 24/175 (13%)

Query: 168 EYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD 227
                R +Y+F   + ++L F+ G+I+++ +++  E  W A    G+ G  P  YVE   
Sbjct: 124 NLEYVRTLYDFPGNDAEDLPFKKGEILVI-IEKPEEQWWSARNKDGRVGMIPVPYVEKLV 182

Query: 228 ETGEVVPGTELPGDKHHLELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGL----- 282
            +           + + +   A        +                +PS   G      
Sbjct: 183 RSSPHGKHGNRNSNSYGIPEPAHAYAQPQTTTPLPAVSGSPGAAITPLPSTQNGPVFAKA 242

Query: 283 ------------------GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET 319
                             G +V V +    G   GE+ G+ G FP ++V+  D  
Sbjct: 243 IQKRVPCAYDKTALALEVGDIVKVTRMNINGQWEGEVNGRKGLFPFTHVKIFDPQ 297

>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A* Length = 303

 Score = 59.6 bits (143), Expect = 2e-10
 Identities = 16/116 (13%), Positives = 30/116 (25%), Gaps = 2/116 (1%)

Query: 114 MMSDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGTIGDRTARFRGVSEYRRYR 173
                 +          P                      G         +    + +  
Sbjct: 184 SSPHGKHGNRNSNSYGIPEPAHAYAQPQTTTPLPAVSGSPGAAITPLPSTQNGPVFAKAI 243

Query: 174 AIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET 229
                 + +   L+ + GDI+ V        G   GE+ G+ G FP ++V+  D  
Sbjct: 244 QKRVPCAYDKTALALEVGDIVKVTRMN--INGQWEGEVNGRKGLFPFTHVKIFDPQ 297

>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A* Length = 303

 Score = 40.0 bits (92), Expect = 6e-04
 Identities = 12/105 (11%), Positives = 27/105 (25%), Gaps = 1/105 (0%)

Query: 57  KDHTIKAKEEGDLKDTQSSSDGSQDVFCSVHLQLSTKEKDLEVNNSNLDDLKKTLANMMS 116
           +     +          +S    +        Q +T    +  +         +  N   
Sbjct: 179 EKLVRSSPHGKHGNRNSNSYGIPEPAHAYAQPQTTTPLPAVSGSPGAAITPLPSTQNGPV 238

Query: 117 DKYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRT 160
               I      + +   L     +++ VT+   N  W G +  R 
Sbjct: 239 FAKAIQKRVPCAYDKTALALEVGDIVKVTRMNINGQWEGEVNGRK 283

>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A Length = 58

 Score = 75.3 bits (186), Expect = 7e-18
 Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 2/55 (3%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
           + +A+Y++ ++ GDEL+F+ GD I+V  K     GW  GEL G+ GW P +YV+ 
Sbjct: 5   QVKALYDYDAQTGDELTFKEGDTIIVHQKD--PAGWWEGELNGKRGWVPANYVQD 57

>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A Length = 58

 Score = 49.5 bits (119), Expect = 1e-08
 Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 119 YYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTARF 163
              A Y YD+    +LTF + + I V +K    WW G +  +    
Sbjct: 5   QVKALYDYDAQTGDELTFKEGDTIIVHQKDPAGWWEGELNGKRGWV 50

>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A Length = 58

 Score = 45.2 bits (108), Expect = 6e-07
 Identities = 14/33 (42%), Positives = 18/33 (54%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEP 315
           G  + V Q    GW  GEL G+ GW P +YV+ 
Sbjct: 25  GDTIIVHQKDPAGWWEGELNGKRGWVPANYVQD 57

>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 78

 Score = 75.9 bits (187), Expect = 7e-18
 Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 2/62 (3%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC 226
           S   +  AIY++     DELSFQ G II V +K+N + GW  G + G TG FP +YVE  
Sbjct: 15  SYLEKVVAIYDYTKDKEDELSFQEGAIIYV-IKKN-DDGWYEGVMNGVTGLFPGNYVESI 72

Query: 227 DE 228
             
Sbjct: 73  SG 74

>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 78

 Score = 52.4 bits (126), Expect = 2e-09
 Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 118 KYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTARF 163
           +  +A Y Y   +  +L+F +  +IYV KK ++ W+ G +   T  F
Sbjct: 18  EKVVAIYDYTKDKEDELSFQEGAIIYVIKKNDDGWYEGVMNGVTGLF 64

>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 78

 Score = 45.8 bits (109), Expect = 5e-07
 Identities = 13/36 (36%), Positives = 19/36 (52%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE 318
           G ++ V +  + GW  G + G TG FP +YVE    
Sbjct: 39  GAIIYVIKKNDDGWYEGVMNGVTGLFPGNYVESISG 74

>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus} Length = 60

 Score = 75.3 bits (186), Expect = 8e-18
 Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 2/56 (3%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
            + +A+Y + +++ DELSF   DII + +K++   GW  G LRG+ G FP +YV  
Sbjct: 6   PQCKALYAYDAQDTDELSFNANDIIDI-IKED-PSGWWTGRLRGKQGLFPNNYVTK 59

>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus} Length = 60

 Score = 53.0 bits (128), Expect = 8e-10
 Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%)

Query: 115 MSDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTARF 163
           +      A Y YD+ +  +L+FN +++I + K+  + WWTG +  +   F
Sbjct: 3   LGSPQCKALYAYDAQDTDELSFNANDIIDIIKEDPSGWWTGRLRGKQGLF 52

>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus} Length = 60

 Score = 45.3 bits (108), Expect = 5e-07
 Identities = 11/33 (33%), Positives = 17/33 (51%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEP 315
             ++ + +    GW  G LRG+ G FP +YV  
Sbjct: 27  NDIIDIIKEDPSGWWTGRLRGKQGLFPNNYVTK 59

>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 75.8 bits (187), Expect = 9e-18
 Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 165 GVSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNA-EPGWLAGELRGQTGWFPESYV 223
           G S     +A+Y++  +  DELSF  G II +  K+N  + G+  GE  G+ G FP   V
Sbjct: 4   GSSGVCFVKALYDYEGQTDDELSFPEGAIIRILNKENQDDDGFWEGEFNGRIGVFPSVLV 63

Query: 224 EPCDE 228
           E    
Sbjct: 64  EELSS 68

>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 45.8 bits (109), Expect = 4e-07
 Identities = 9/35 (25%), Positives = 15/35 (42%)

Query: 284 TVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE 318
            ++  +   + G+  GE  G+ G FP   VE    
Sbjct: 34  RILNKENQDDDGFWEGEFNGRIGVFPSVLVEELSS 68

>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum} Length = 80

 Score = 75.9 bits (187), Expect = 9e-18
 Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET 229
           +  RA+ ++   +   L F+  DII +   ++ E  W  G+L G+ G FP  +VE     
Sbjct: 11  KYARALKDYNVSDTSLLPFKRNDIITI-TFKDQENKWFMGQLNGKEGSFPVDHVEILLSD 69

>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum} Length = 80

 Score = 45.4 bits (108), Expect = 6e-07
 Identities = 10/32 (31%), Positives = 15/32 (46%)

Query: 288 VKQNAEPGWLAGELRGQTGWFPESYVEPCDET 319
             ++ E  W  G+L G+ G FP  +VE     
Sbjct: 38  TFKDQENKWFMGQLNGKEGSFPVDHVEILLSD 69

>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A Length = 304

 Score = 81.2 bits (199), Expect = 1e-17
 Identities = 42/226 (18%), Positives = 70/226 (30%), Gaps = 18/226 (7%)

Query: 108 KKTLANMMSDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGTIGDRTARFRGVS 167
            +    +   +  I    +DS  P  L F +   +  T              +       
Sbjct: 76  AQPPPGVSPSRLRIGDQEFDSL-PALLEFYKIHYLDTTTLIEPVSR--SRQGSGVILRQE 132

Query: 168 EYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD 227
           E    RA+++F   + ++L F+ GDI+ +  K   +  W A +  G+ G  P  YVE   
Sbjct: 133 EAEYVRALFDFNGNDEEDLPFKKGDILRIRDKPEEQW-WNAEDSEGKRGMIPVPYVEKYR 191

Query: 228 ETGEVVPGTELPGDKHHLELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIM------- 280
                V        +         PE    +  S                 I        
Sbjct: 192 PASASVSALIGGNQEGSHPQPLGGPEPGPYAQPSVNTPLPNLQNGPIYARVIQKRVPNAY 251

Query: 281 -------GLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET 319
                   +G +V V +    G   GE  G+ G FP ++V   D+ 
Sbjct: 252 DKTALALEVGELVKVTKINVSGQWEGECNGKRGHFPFTHVRLLDQQ 297

>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A Length = 304

 Score = 74.6 bits (182), Expect = 2e-15
 Identities = 31/247 (12%), Positives = 61/247 (24%), Gaps = 56/247 (22%)

Query: 36  HGAPLLLRILQNWAHQRLKITKDHTIKAKEEGDLKDTQSSSDGSQDVFCSVHLQLSTKEK 95
           +       I  +     +  +            L+      D S       +        
Sbjct: 54  NSRVSHYIINSSGPRPPVPPSPAQPPPGVSPSRLRIGDQEFD-SLPALLEFYKIHYLDTT 112

Query: 96  DLEVNNSNLDDLKKTLANMMSDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTG 154
            L    S        +      +Y  A + ++  +  DL F + +++ +  K E  WW  
Sbjct: 113 TLIEPVSRSRQGSGVILRQEEAEYVRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNA 172

Query: 155 TIGD----------------------------------------------------RTAR 162
              +                                                        
Sbjct: 173 EDSEGKRGMIPVPYVEKYRPASASVSALIGGNQEGSHPQPLGGPEPGPYAQPSVNTPLPN 232

Query: 163 FRGVSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESY 222
            +    Y R        + +   L+ + G+++ V  K N   G   GE  G+ G FP ++
Sbjct: 233 LQNGPIYARVIQKRVPNAYDKTALALEVGELVKV-TKINVS-GQWEGECNGKRGHFPFTH 290

Query: 223 VEPCDET 229
           V   D+ 
Sbjct: 291 VRLLDQQ 297

>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 70

 Score = 75.0 bits (185), Expect = 1e-17
 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 2/65 (3%)

Query: 165 GVSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           G S   +Y  +  +  +   ELS Q G+++ V +++N E GW       + GW P +Y+E
Sbjct: 4   GSSGLEQYVVVSNYKKQENSELSLQAGEVVDV-IEKN-ESGWWFVSTSEEQGWVPATYLE 61

Query: 225 PCDET 229
             +  
Sbjct: 62  AQNSG 66

>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 70

 Score = 50.4 bits (121), Expect = 9e-09
 Identities = 11/44 (25%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 118 KYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRT 160
           + Y+    Y   E  +L+    EV+ V +K E+ WW  +  +  
Sbjct: 9   EQYVVVSNYKKQENSELSLQAGEVVDVIEKNESGWWFVSTSEEQ 52

>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 70

 Score = 45.7 bits (109), Expect = 4e-07
 Identities = 12/37 (32%), Positives = 17/37 (45%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET 319
           G VV V +  E GW       + GW P +Y+E  +  
Sbjct: 30  GEVVDVIEKNESGWWFVSTSEEQGWVPATYLEAQNSG 66

>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 80

 Score = 75.5 bits (186), Expect = 1e-17
 Identities = 23/64 (35%), Positives = 34/64 (53%)

Query: 165 GVSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
            +++     A+Y F  +   +L+FQ GD I V  K ++   W  G+LRGQTG FP +YV 
Sbjct: 13  NLNQPIEVTALYSFEGQQPGDLNFQAGDRITVISKTDSHFDWWEGKLRGQTGIFPANYVT 72

Query: 225 PCDE 228
               
Sbjct: 73  MNSG 76

>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 80

 Score = 55.5 bits (134), Expect = 2e-10
 Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 3/59 (5%)

Query: 108 KKTLANMMSDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN---DWWTGTIGDRTARF 163
            + + N+       A Y ++  +PGDL F   + I V  K +   DWW G +  +T  F
Sbjct: 8   HERVGNLNQPIEVTALYSFEGQQPGDLNFQAGDRITVISKTDSHFDWWEGKLRGQTGIF 66

>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 80

 Score = 43.1 bits (102), Expect = 4e-06
 Identities = 13/30 (43%), Positives = 17/30 (56%)

Query: 289 KQNAEPGWLAGELRGQTGWFPESYVEPCDE 318
           K ++   W  G+LRGQTG FP +YV     
Sbjct: 47  KTDSHFDWWEGKLRGQTGIFPANYVTMNSG 76

>1bb9_A Amphiphysin 2; transferase, SH3 domain; 2.20A {Rattus norvegicus} SCOP: b.34.2.1 PDB: 1muz_A 1mv0_B Length = 115

 Score = 76.7 bits (188), Expect = 1e-17
 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 13/71 (18%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAE---PGWLAG----------ELRGQTG 216
            + +A +++ + + DEL  + GD+++V   QN E    GWL G          EL    G
Sbjct: 45  FKVQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRG 104

Query: 217 WFPESYVEPCD 227
            FPE++ E   
Sbjct: 105 VFPENFTERVQ 115

>3o5z_A Phosphatidylinositol 3-kinase regulatory subunit; SRC homology 3 domain, protein binding; 2.01A {Homo sapiens} PDB: 2kt1_A Length = 90

 Score = 75.0 bits (184), Expect = 2e-17
 Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 15/73 (20%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMV-------------PVKQNAEPGWLAG--EL 211
            E  +YRA+Y F     ++L   PGD+++V               +     GW+ G  E 
Sbjct: 9   PEGFQYRALYPFRRERPEDLELLPGDVLVVSRAALQALGVAEGGERCPQSVGWMPGLNER 68

Query: 212 RGQTGWFPESYVE 224
             Q G FP +YVE
Sbjct: 69  TRQRGDFPGTYVE 81

>3o5z_A Phosphatidylinositol 3-kinase regulatory subunit; SRC homology 3 domain, protein binding; 2.01A {Homo sapiens} PDB: 2kt1_A Length = 90

 Score = 40.0 bits (93), Expect = 9e-05
 Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 2/30 (6%)

Query: 287 PVKQNAEPGWLAG--ELRGQTGWFPESYVE 314
             +     GW+ G  E   Q G FP +YVE
Sbjct: 52  GERCPQSVGWMPGLNERTRQRGDFPGTYVE 81

>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 71

 Score = 74.2 bits (183), Expect = 3e-17
 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 3/64 (4%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNA--EPGWLAGELRGQTGWFPESYVE 224
           S     RA+Y+      DEL+F  GDI+ + ++Q+     GW    L G+ G  P + ++
Sbjct: 5   SSGLLARALYDNCPDCSDELAFSRGDILTI-LEQHVPESEGWWKCLLHGRQGLAPANRLQ 63

Query: 225 PCDE 228
               
Sbjct: 64  ILSG 67

>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 71

 Score = 43.4 bits (103), Expect = 3e-06
 Identities = 7/35 (20%), Positives = 13/35 (37%)

Query: 284 TVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE 318
           T++        GW    L G+ G  P + ++    
Sbjct: 33  TILEQHVPESEGWWKCLLHGRQGLAPANRLQILSG 67

>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 68

 Score = 73.8 bits (182), Expect = 3e-17
 Identities = 17/59 (28%), Positives = 35/59 (59%), Gaps = 2/59 (3%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE 228
             Y A+Y+FV +  ++L  +PGDII + ++ +    W  G+++ + G+FP ++V+    
Sbjct: 8   NTYVALYKFVPQENEDLEMRPGDIITL-LEDS-NEDWWKGKIQDRIGFFPANFVQRLSG 64

>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 68

 Score = 53.8 bits (130), Expect = 6e-10
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 116 SDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTIGDRTARF 163
           S   Y+A Y +   E  DL     ++I + +  N DWW G I DR   F
Sbjct: 6   SGNTYVALYKFVPQENEDLEMRPGDIITLLEDSNEDWWKGKIQDRIGFF 54

>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 68

 Score = 43.8 bits (104), Expect = 2e-06
 Identities = 7/36 (19%), Positives = 21/36 (58%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE 318
           G ++ + +++   W  G+++ + G+FP ++V+    
Sbjct: 29  GDIITLLEDSNEDWWKGKIQDRIGFFPANFVQRLSG 64

>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 68

 Score = 73.8 bits (182), Expect = 4e-17
 Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 2/62 (3%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC 226
           S    + AI ++ + +  +LSF  G+ I+  + +     W  GE  G  G+ P ++V   
Sbjct: 5   SSGEEFVAIADYAATDETQLSFLRGEKIL--ILRQTTADWWWGERAGCCGYIPANHVGKH 62

Query: 227 DE 228
             
Sbjct: 63  SG 64

>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 68

 Score = 54.2 bits (131), Expect = 5e-10
 Identities = 12/46 (26%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 116 SDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTIGDRT 160
           S + ++A   Y +T+   L+F + E I + ++   DWW G      
Sbjct: 6   SGEEFVAIADYAATDETQLSFLRGEKILILRQTTADWWWGERAGCC 51

>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 68

 Score = 43.4 bits (103), Expect = 3e-06
 Identities = 8/36 (22%), Positives = 14/36 (38%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE 318
           G  + + +     W  GE  G  G+ P ++V     
Sbjct: 29  GEKILILRQTTADWWWGERAGCCGYIPANHVGKHSG 64

>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A Length = 58

 Score = 73.3 bits (181), Expect = 4e-17
 Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC 226
               A+Y+F  +   +L  +PGD + + +++   P W  G   G+TG FP +YV+P 
Sbjct: 3   EYVEALYQFDPQQDGDLGLKPGDKVQL-LEKL-SPEWYKGSCNGRTGIFPANYVKPA 57

>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A Length = 58

 Score = 56.8 bits (138), Expect = 3e-11
 Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 118 KYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTIGDRTARF 163
           +Y  A Y +D  + GDL     + + + +K + +W+ G+   RT  F
Sbjct: 3   EYVEALYQFDPQQDGDLGLKPGDKVQLLEKLSPEWYKGSCNGRTGIF 49

>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A Length = 58

 Score = 45.6 bits (109), Expect = 4e-07
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPC 316
           G  V + +   P W  G   G+TG FP +YV+P 
Sbjct: 24  GDKVQLLEKLSPEWYKGSCNGRTGIFPANYVKPA 57

>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain protein 2A, endophilin 1, EEN-B1, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2knb_B 3iql_A Length = 73

 Score = 73.8 bits (182), Expect = 4e-17
 Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 2/68 (2%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC 226
           S     RA+Y+F   N  EL F+ GDII +   Q  +  W  G L G +G+FP +YVE  
Sbjct: 5   SSGPCCRALYDFEPENEGELGFKEGDIITL-TNQI-DENWYEGMLHGHSGFFPINYVEIL 62

Query: 227 DETGEVVP 234
                  P
Sbjct: 63  VALPHSGP 70

>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain protein 2A, endophilin 1, EEN-B1, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2knb_B 3iql_A Length = 73

 Score = 48.8 bits (117), Expect = 4e-08
 Identities = 10/46 (21%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 119 YYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTIGDRTARF 163
              A Y ++    G+L F + ++I +T + + +W+ G +   +  F
Sbjct: 9   CCRALYDFEPENEGELGFKEGDIITLTNQIDENWYEGMLHGHSGFF 54

>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain protein 2A, endophilin 1, EEN-B1, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2knb_B 3iql_A Length = 73

 Score = 43.4 bits (103), Expect = 3e-06
 Identities = 12/42 (28%), Positives = 19/42 (45%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVP 324
           G ++ +    +  W  G L G +G+FP +YVE         P
Sbjct: 29  GDIITLTNQIDENWYEGMLHGHSGFFPINYVEILVALPHSGP 70

>1udl_A Intersectin 2, KIAA1256; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 98

 Score = 74.8 bits (184), Expect = 4e-17
 Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 2/62 (3%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET 229
            +  A+Y++ + N DELSF  G +I V + ++ +P W  GE+ G TG FP +YV+   ++
Sbjct: 35  CQVIAMYDYAANNEDELSFSKGQLINV-MNKD-DPDWWQGEINGVTGLFPSNYVKMTTDS 92

Query: 230 GE 231
             
Sbjct: 93  SG 94

>1udl_A Intersectin 2, KIAA1256; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 98

 Score = 52.8 bits (127), Expect = 2e-09
 Identities = 26/113 (23%), Positives = 43/113 (38%), Gaps = 27/113 (23%)

Query: 212 RGQTGWFPESYVEPCDETGEVVPGTELPGDKHHLELIAE---VPENISDSGGSGIAVEEG 268
            GQ GWFP S+V+    + E       P  +    +IA       N  +     ++  +G
Sbjct: 6   SGQKGWFPASHVKLLGPSSERATPAFHPVCQ----VIAMYDYAANNEDE-----LSFSKG 56

Query: 269 PGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGE 321
                 +          + V    +P W  GE+ G TG FP +YV+   ++  
Sbjct: 57  -----QL----------INVMNKDDPDWWQGEINGVTGLFPSNYVKMTTDSSG 94

>1udl_A Intersectin 2, KIAA1256; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 98

 Score = 52.4 bits (126), Expect = 4e-09
 Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 1/57 (1%)

Query: 108 KKTLANMMSDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTARF 163
           ++           IA Y Y +    +L+F++ ++I V  K + DWW G I   T  F
Sbjct: 25  ERATPAFHPVCQVIAMYDYAANNEDELSFSKGQLINVMNKDDPDWWQGEINGVTGLF 81

>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} Length = 73

 Score = 73.9 bits (182), Expect = 4e-17
 Identities = 13/61 (21%), Positives = 30/61 (49%), Gaps = 2/61 (3%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC 226
           +      A+Y++  ++  E++ + GDI+ +    +    W   E+  + G+ P +YV+  
Sbjct: 3   TGKELVLALYDYQEKSPREVTMKKGDILTL--LNSTNKDWWKVEVNDRQGFVPAAYVKKL 60

Query: 227 D 227
           D
Sbjct: 61  D 61

>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} Length = 73

 Score = 55.0 bits (133), Expect = 3e-10
 Identities = 11/47 (23%), Positives = 21/47 (44%), Gaps = 1/47 (2%)

Query: 118 KYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTIGDRTARF 163
           +  +A Y Y    P ++T  + +++ +    N DWW   + DR    
Sbjct: 6   ELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFV 52

>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} Length = 73

 Score = 45.8 bits (109), Expect = 5e-07
 Identities = 8/35 (22%), Positives = 17/35 (48%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD 317
           G ++ +  +    W   E+  + G+ P +YV+  D
Sbjct: 27  GDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLD 61

>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A Length = 58

 Score = 73.3 bits (181), Expect = 4e-17
 Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 2/56 (3%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
           R  RA+Y+F +   DEL F+ G+++ V +  +  P W  G L  + G FP +YV P
Sbjct: 2   RWARALYDFEALEEDELGFRSGEVVEV-LDSS-NPSWWTGRLHNKLGLFPANYVAP 55

>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A Length = 58

 Score = 53.7 bits (130), Expect = 5e-10
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 118 KYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTIGDRTARF 163
           ++  A Y +++ E  +L F   EV+ V    N  WWTG + ++   F
Sbjct: 2   RWARALYDFEALEEDELGFRSGEVVEVLDSSNPSWWTGRLHNKLGLF 48

>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A Length = 58

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 14/33 (42%), Positives = 18/33 (54%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEP 315
           G VV V  ++ P W  G L  + G FP +YV P
Sbjct: 23  GEVVEVLDSSNPSWWTGRLHNKLGLFPANYVAP 55

>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 72

 Score = 73.5 bits (181), Expect = 5e-17
 Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 2/64 (3%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC 226
            E     A +++V R   ELSF+ G  +++   Q A   W  G   G  G  P  Y+   
Sbjct: 7   GEPIEAIAKFDYVGRTARELSFKKGASLLL--YQRASDDWWEGRHNGIDGLIPHQYIVVQ 64

Query: 227 DETG 230
           D +G
Sbjct: 65  DTSG 68

>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 72

 Score = 50.8 bits (122), Expect = 8e-09
 Identities = 9/44 (20%), Positives = 18/44 (40%), Gaps = 1/44 (2%)

Query: 121 IAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTIGDRTARF 163
           IA + Y      +L+F +   + + ++ + DWW G         
Sbjct: 13  IAKFDYVGRTARELSFKKGASLLLYQRASDDWWEGRHNGIDGLI 56

>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 72

 Score = 46.2 bits (110), Expect = 3e-07
 Identities = 11/38 (28%), Positives = 15/38 (39%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETG 320
           G  + + Q A   W  G   G  G  P  Y+   D +G
Sbjct: 31  GASLLLYQRASDDWWEGRHNGIDGLIPHQYIVVQDTSG 68

>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A Length = 76

 Score = 73.5 bits (181), Expect = 5e-17
 Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 5/67 (7%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQ---TGWFPESYV 223
           ++ RR + IY+  + N DEL+F  G++I+V   +  +  W  G + GQ    G FP S+V
Sbjct: 8   NKVRRVKTIYDCQADNDDELTFIEGEVIIV-TGEE-DQEWWIGHIEGQPERKGVFPVSFV 65

Query: 224 EPCDETG 230
               ++G
Sbjct: 66  HILSDSG 72

>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A Length = 76

 Score = 41.9 bits (99), Expect = 1e-05
 Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 3/41 (7%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQ---TGWFPESYVEPCDETG 320
           G V+ V    +  W  G + GQ    G FP S+V    ++G
Sbjct: 32  GEVIIVTGEEDQEWWIGHIEGQPERKGVFPVSFVHILSDSG 72

>1uhf_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 69

 Score = 73.5 bits (181), Expect = 6e-17
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 3/63 (4%)

Query: 165 GVSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           G S    Y A+Y + S    +L+F  G+ I+V      +  W  G +  ++G FP +YV+
Sbjct: 4   GSSGGEEYIALYPYSSVEPGDLTFTEGEEILV---TQKDGEWWTGSIGDRSGIFPSNYVK 60

Query: 225 PCD 227
           P D
Sbjct: 61  PKD 63

>1uhf_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 69

 Score = 68.8 bits (169), Expect = 2e-15
 Identities = 28/48 (58%), Positives = 35/48 (72%)

Query: 116 SDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGTIGDRTARF 163
             + YIA YPY S EPGDLTF + E I VT+K+ +WWTG+IGDR+  F
Sbjct: 7   GGEEYIALYPYSSVEPGDLTFTEGEEILVTQKDGEWWTGSIGDRSGIF 54

>1uhf_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 69

 Score = 42.3 bits (100), Expect = 8e-06
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query: 293 EPGWLAGELRGQTGWFPESYVEPCD 317
           +  W  G +  ++G FP +YV+P D
Sbjct: 39  DGEWWTGSIGDRSGIFPSNYVKPKD 63

>2csi_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 76

 Score = 73.6 bits (181), Expect = 6e-17
 Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 8/64 (12%)

Query: 170 RRYRAIYEFVSRNG-------DELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESY 222
           RR  A+Y++  R          EL+F  GDII V   +  E G+  GEL GQ G  P ++
Sbjct: 8   RRMVALYDYDPRESSPNVDVEAELTFCTGDIITV-FGEIDEDGFYYGELNGQKGLVPSNF 66

Query: 223 VEPC 226
           +E  
Sbjct: 67  LEEV 70

>2csi_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 76

 Score = 44.7 bits (106), Expect = 1e-06
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 288 VKQNAEPGWLAGELRGQTGWFPESYVEPC 316
             +  E G+  GEL GQ G  P +++E  
Sbjct: 42  FGEIDEDGFYYGELNGQKGLVPSNFLEEV 70

>2cub_A Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor, tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88

 Score = 74.0 bits (182), Expect = 6e-17
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET 229
                + +++   DELS   G  ++V  K     GW  G   GQ GWFP +YV    ++
Sbjct: 19  PAYVKFNYMAEREDELSLIKGTKVIVMEKC--SDGWWRGSYNGQVGWFPSNYVTEEGDS 75

>2cub_A Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor, tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88

 Score = 49.4 bits (118), Expect = 4e-08
 Identities = 9/49 (18%), Positives = 20/49 (40%), Gaps = 1/49 (2%)

Query: 116 SDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEND-WWTGTIGDRTARF 163
            +      + Y +    +L+  +   + V +K +D WW G+   +   F
Sbjct: 16  LNMPAYVKFNYMAEREDELSLIKGTKVIVMEKCSDGWWRGSYNGQVGWF 64

>2cub_A Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor, tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88

 Score = 45.5 bits (108), Expect = 9e-07
 Identities = 15/37 (40%), Positives = 19/37 (51%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET 319
           GT V V +    GW  G   GQ GWFP +YV    ++
Sbjct: 39  GTKVIVMEKCSDGWWRGSYNGQVGWFPSNYVTEEGDS 75

>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A* Length = 62

 Score = 73.0 bits (180), Expect = 6e-17
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 4/61 (6%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR--GQTGWFPESYVEPCD 227
           + +RAI+ FV R+ DEL  +  D ++V ++  AE  W        G  G FP  Y     
Sbjct: 4   QTHRAIFRFVPRHEDELELEVDDPLLVELQ--AEDYWYEAYNMRTGARGVFPAYYAIEVT 61

Query: 228 E 228
           +
Sbjct: 62  K 62

>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A* Length = 62

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 9/38 (23%), Positives = 12/38 (31%), Gaps = 2/38 (5%)

Query: 283 GTVVPVKQNAEPGWLAGELR--GQTGWFPESYVEPCDE 318
              + V+  AE  W        G  G FP  Y     +
Sbjct: 25  DDPLLVELQAEDYWYEAYNMRTGARGVFPAYYAIEVTK 62

>1uhc_A KIAA1010 protein; beta barrel, SH3, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 79

 Score = 73.6 bits (181), Expect = 7e-17
 Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 2/64 (3%)

Query: 166 VSEYRRYRAIYEFVSRNGDELSFQPGDIIMV--PVKQNAEPGWLAGELRGQTGWFPESYV 223
               + Y A+Y F +RN +ELS      + +           W   E+ G+ G+ P +Y+
Sbjct: 10  AEGNQVYFAVYTFKARNPNELSVSANQKLKILEFKDVTGNTEWWLAEVNGKKGYVPSNYI 69

Query: 224 EPCD 227
              +
Sbjct: 70  RKTE 73

>1uhc_A KIAA1010 protein; beta barrel, SH3, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 79

 Score = 42.4 bits (100), Expect = 9e-06
 Identities = 6/28 (21%), Positives = 12/28 (42%)

Query: 290 QNAEPGWLAGELRGQTGWFPESYVEPCD 317
                 W   E+ G+ G+ P +Y+   +
Sbjct: 46  VTGNTEWWLAEVNGKKGYVPSNYIRKTE 73

>1z9q_A Neutrophil cytosol factor 4; oxidoreductase activator; NMR {Homo sapiens} Length = 79

 Score = 73.5 bits (181), Expect = 7e-17
 Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 2/65 (3%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC 226
               R  A+++F   +  EL+F+ GD+I + + +     WL G +RG TG FP S+V+  
Sbjct: 16  MAAPRAEALFDFTGNSKLELNFKAGDVIFL-LSRI-NKDWLEGTVRGATGIFPLSFVKIL 73

Query: 227 DETGE 231
            +  E
Sbjct: 74  KDFPE 78

>1z9q_A Neutrophil cytosol factor 4; oxidoreductase activator; NMR {Homo sapiens} Length = 79

 Score = 53.1 bits (128), Expect = 2e-09
 Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 1/41 (2%)

Query: 121 IAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTIGDRT 160
            A + +      +L F   +VI++  + N DW  GT+   T
Sbjct: 22  EALFDFTGNSKLELNFKAGDVIFLLSRINKDWLEGTVRGAT 62

>1z9q_A Neutrophil cytosol factor 4; oxidoreductase activator; NMR {Homo sapiens} Length = 79

 Score = 45.0 bits (107), Expect = 1e-06
 Identities = 14/39 (35%), Positives = 20/39 (51%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGE 321
           G V+ +       WL G +RG TG FP S+V+   +  E
Sbjct: 40  GDVIFLLSRINKDWLEGTVRGATGIFPLSFVKILKDFPE 78

>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N protein 1; endocytosis, N-WAsp, dynamin, pacsin I, transferase; 2.64A {Mus musculus} PDB: 2x3x_D Length = 60

 Score = 72.6 bits (179), Expect = 8e-17
 Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 2/60 (3%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL-RGQTGWFPESYVEP 225
           ++  R RA+Y++  +  DELSF+ GD +   + +  E GW  G L  GQ G +P +YVE 
Sbjct: 1   AKGVRVRALYDYDGQEQDELSFKAGDELTK-LGEEDEQGWCRGRLDSGQLGLYPANYVEA 59

>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N protein 1; endocytosis, N-WAsp, dynamin, pacsin I, transferase; 2.64A {Mus musculus} PDB: 2x3x_D Length = 60

 Score = 38.7 bits (91), Expect = 1e-04
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)

Query: 288 VKQNAEPGWLAGEL-RGQTGWFPESYVEP 315
           + +  E GW  G L  GQ G +P +YVE 
Sbjct: 31  LGEEDEQGWCRGRLDSGQLGLYPANYVEA 59

>1j3t_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 74

 Score = 73.1 bits (180), Expect = 9e-17
 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC 226
            E  + +A+  + ++  + L+F   DII V  +Q     W  GE+ G  GWFP+SYV+  
Sbjct: 8   VENLKAQALCSWTAKKDNHLNFSKHDIITVLEQQE---NWWFGEVHGGRGWFPKSYVKII 64

Query: 227 DET 229
             +
Sbjct: 65  PGS 67

>1j3t_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 74

 Score = 52.7 bits (127), Expect = 2e-09
 Identities = 9/45 (20%), Positives = 21/45 (46%)

Query: 119 YYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGTIGDRTARF 163
              A   + + +   L F++ ++I V +++ +WW G +      F
Sbjct: 12  KAQALCSWTAKKDNHLNFSKHDIITVLEQQENWWFGEVHGGRGWF 56

>1j3t_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 74

 Score = 41.2 bits (97), Expect = 2e-05
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 293 EPGWLAGELRGQTGWFPESYVEPCDET 319
           +  W  GE+ G  GWFP+SYV+    +
Sbjct: 41  QENWWFGEVHGGRGWFPKSYVKIIPGS 67

>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ... Length = 62

 Score = 72.6 bits (179), Expect = 9e-17
 Identities = 13/61 (21%), Positives = 30/61 (49%), Gaps = 2/61 (3%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC 226
           +       +Y++  ++  EL+ + GDI+ +    +    W   E+ G+ G+ P +Y++  
Sbjct: 4   TGKELVLVLYDYQEKSPRELTVKKGDILTL--LNSTNKDWWKIEVNGRQGFVPAAYLKKL 61

Query: 227 D 227
           D
Sbjct: 62  D 62

>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ... Length = 62

 Score = 53.4 bits (129), Expect = 8e-10
 Identities = 10/47 (21%), Positives = 19/47 (40%), Gaps = 1/47 (2%)

Query: 118 KYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTIGDRTARF 163
           +  +  Y Y    P +LT  + +++ +    N DWW   +  R    
Sbjct: 7   ELVLVLYDYQEKSPRELTVKKGDILTLLNSTNKDWWKIEVNGRQGFV 53

>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ... Length = 62

 Score = 44.9 bits (107), Expect = 6e-07
 Identities = 8/35 (22%), Positives = 18/35 (51%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD 317
           G ++ +  +    W   E+ G+ G+ P +Y++  D
Sbjct: 28  GDILTLLNSTNKDWWKIEVNGRQGFVPAAYLKKLD 62

>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A Length = 64

 Score = 72.3 bits (178), Expect = 1e-16
 Identities = 22/64 (34%), Positives = 42/64 (65%), Gaps = 4/64 (6%)

Query: 166 VSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR--GQTGWFPESYV 223
           ++  R YRA+Y++ +++ DE+SF+ GD I+  V+   + GW+ G ++  G+TG  P +Y+
Sbjct: 3   MANLRTYRAMYDYSAQDEDEVSFRDGDYIVN-VQPI-DDGWMYGTVQRTGRTGMLPANYI 60

Query: 224 EPCD 227
           E  +
Sbjct: 61  EFVN 64

>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A Length = 64

 Score = 45.7 bits (109), Expect = 4e-07
 Identities = 10/46 (21%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 112 ANMMSDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTI 156
             M + + Y A Y Y + +  +++F   + I   +  ++ W  GT+
Sbjct: 1   GAMANLRTYRAMYDYSAQDEDEVSFRDGDYIVNVQPIDDGWMYGTV 46

>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A Length = 64

 Score = 39.1 bits (92), Expect = 7e-05
 Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 283 GTVVPVKQNAEPGWLAGELR--GQTGWFPESYVEPCD 317
           G  +   Q  + GW+ G ++  G+TG  P +Y+E  +
Sbjct: 28  GDYIVNVQPIDDGWMYGTVQRTGRTGMLPANYIEFVN 64

>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A Length = 58

 Score = 72.2 bits (178), Expect = 1e-16
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 2/55 (3%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD 227
           +A+++F  +   EL F+ GD I V +  + +P W  G   GQTG FP +YV   +
Sbjct: 6   QALFDFDPQEDGELGFRRGDFIHV-MDNS-DPNWWKGACHGQTGMFPRNYVTAVN 58

>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A Length = 58

 Score = 55.3 bits (134), Expect = 1e-10
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 118 KYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTIGDRTARF 163
            Y  A + +D  E G+L F + + I+V    + +WW G    +T  F
Sbjct: 3   TYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGACHGQTGMF 49

>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A Length = 58

 Score = 44.1 bits (105), Expect = 1e-06
 Identities = 14/35 (40%), Positives = 19/35 (54%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD 317
           G  + V  N++P W  G   GQTG FP +YV   +
Sbjct: 24  GDFIHVMDNSDPNWWKGACHGQTGMFPRNYVTAVN 58

>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A Length = 60

 Score = 72.2 bits (178), Expect = 1e-16
 Identities = 18/55 (32%), Positives = 30/55 (54%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
           +  A+Y F      +L F+ GD+I +  K +++  W  G + G+ G FP +YVE 
Sbjct: 5   KAVALYSFAGEESGDLPFRKGDVITILKKSDSQNDWWTGRVNGREGIFPANYVEL 59

>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A Length = 60

 Score = 54.9 bits (133), Expect = 2e-10
 Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 3/51 (5%)

Query: 116 SDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKK---ENDWWTGTIGDRTARF 163
           S    +A Y +   E GDL F + +VI + KK   +NDWWTG +  R   F
Sbjct: 2   SSPKAVALYSFAGEESGDLPFRKGDVITILKKSDSQNDWWTGRVNGREGIF 52

>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A Length = 60

 Score = 39.5 bits (93), Expect = 5e-05
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query: 289 KQNAEPGWLAGELRGQTGWFPESYVEP 315
           K +++  W  G + G+ G FP +YVE 
Sbjct: 33  KSDSQNDWWTGRVNGREGIFPANYVEL 59

>2epd_A RHO GTPase-activating protein 4; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 76

 Score = 72.8 bits (179), Expect = 1e-16
 Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 2/69 (2%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC 226
                  A + +  R   ELSF+ GD++ +   + A   W  GE  G  G  P  Y+   
Sbjct: 8   EGVVEAVACFAYTGRTAQELSFRRGDVLRL--HERASSDWWRGEHNGMRGLIPHKYITLP 65

Query: 227 DETGEVVPG 235
             T + V G
Sbjct: 66  AGTEKQVVG 74

>2epd_A RHO GTPase-activating protein 4; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 76

 Score = 51.2 bits (123), Expect = 6e-09
 Identities = 9/44 (20%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 121 IAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTARF 163
           +A + Y      +L+F + +V+ + ++  +DWW G         
Sbjct: 14  VACFAYTGRTAQELSFRRGDVLRLHERASSDWWRGEHNGMRGLI 57

>2epd_A RHO GTPase-activating protein 4; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 76

 Score = 44.6 bits (106), Expect = 1e-06
 Identities = 13/43 (30%), Positives = 18/43 (41%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVPG 325
           G V+ + + A   W  GE  G  G  P  Y+     T + V G
Sbjct: 32  GDVLRLHERASSDWWRGEHNGMRGLIPHKYITLPAGTEKQVVG 74

>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1 Length = 62

 Score = 72.2 bits (178), Expect = 1e-16
 Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 2/55 (3%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           RR RA+Y+F +   +EL+F+ G++I V +  + +  W  GE    TG FP ++V 
Sbjct: 6   RRVRALYDFEAVEDNELTFKHGELITV-LDDS-DANWWQGENHRGTGLFPSNFVT 58

>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1 Length = 62

 Score = 52.2 bits (126), Expect = 2e-09
 Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 1/47 (2%)

Query: 118 KYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTIGDRTARF 163
           +   A Y +++ E  +LTF   E+I V    + +WW G     T  F
Sbjct: 6   RRVRALYDFEAVEDNELTFKHGELITVLDDSDANWWQGENHRGTGLF 52

>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1 Length = 62

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVE 314
           G ++ V  +++  W  GE    TG FP ++V 
Sbjct: 27  GELITVLDDSDANWWQGENHRGTGLFPSNFVT 58

>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens} Length = 68

 Score = 72.3 bits (178), Expect = 1e-16
 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 2/53 (3%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
           R +Y+F   N  EL F+ GDII +   Q  +  W  G + G++G+FP +YVE 
Sbjct: 7   RGLYDFEPENQGELGFKEGDIITL-TNQI-DENWYEGMIHGESGFFPINYVEV 57

>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens} Length = 68

 Score = 50.3 bits (121), Expect = 1e-08
 Identities = 10/44 (22%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 121 IAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTARF 163
              Y ++    G+L F + ++I +T + + +W+ G I   +  F
Sbjct: 7   RGLYDFEPENQGELGFKEGDIITLTNQIDENWYEGMIHGESGFF 50

>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens} Length = 68

 Score = 43.4 bits (103), Expect = 2e-06
 Identities = 10/33 (30%), Positives = 19/33 (57%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEP 315
           G ++ +    +  W  G + G++G+FP +YVE 
Sbjct: 25  GDIITLTNQIDENWYEGMIHGESGFFPINYVEV 57

>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus} Length = 70

 Score = 72.2 bits (178), Expect = 1e-16
 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 4/64 (6%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE--LRGQTGWFPESYVE 224
           S    + A++ + +   +EL  Q G+ I   V    + GWL G   L G+TG FP  YV 
Sbjct: 5   SSGNMFVALHTYSAHRPEELDLQKGEGIR--VLGKYQDGWLKGLSLLTGRTGIFPSDYVI 62

Query: 225 PCDE 228
           P   
Sbjct: 63  PVSG 66

>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus} Length = 70

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 2/38 (5%)

Query: 283 GTVVPVKQNAEPGWLAGE--LRGQTGWFPESYVEPCDE 318
           G  + V    + GWL G   L G+TG FP  YV P   
Sbjct: 29  GEGIRVLGKYQDGWLKGLSLLTGRTGIFPSDYVIPVSG 66

>1wxu_A Peroxisomal biogenesis factor 13; SH3 domain, PEX13, protein-protein interaction, structural genomics; NMR {Mus musculus} Length = 93

 Score = 72.9 bits (179), Expect = 2e-16
 Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 4/75 (5%)

Query: 154 GTIGDRTARFR-GVSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVK--QNAEPGWLAGE 210
           G+ G     +  G  ++   RA Y+FV+ + +E+SF+ GD++ + +K  Q    GWL   
Sbjct: 1   GSSGSSGTNWASGEDDHVVARAEYDFVAVSDEEISFRAGDMLNLALKEQQPKVRGWLLAS 60

Query: 211 LRGQ-TGWFPESYVE 224
           L GQ TG  P +YV+
Sbjct: 61  LDGQTTGLIPANYVK 75

>1wxu_A Peroxisomal biogenesis factor 13; SH3 domain, PEX13, protein-protein interaction, structural genomics; NMR {Mus musculus} Length = 93

 Score = 37.9 bits (88), Expect = 5e-04
 Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 1/26 (3%)

Query: 290 QNAEPGWLAGELRGQ-TGWFPESYVE 314
           Q    GWL   L GQ TG  P +YV+
Sbjct: 50  QPKVRGWLLASLDGQTTGLIPANYVK 75

>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus} Length = 73

 Score = 72.3 bits (178), Expect = 2e-16
 Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 2/55 (3%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
              +A+Y+F   N  EL F+ GD+I +   Q  +  W  G L GQ+G+FP SYV+
Sbjct: 14  PSCKALYDFEPENDGELGFREGDLITL-TNQI-DENWYEGMLHGQSGFFPLSYVQ 66

>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus} Length = 73

 Score = 49.6 bits (119), Expect = 2e-08
 Identities = 10/44 (22%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 121 IAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTIGDRTARF 163
            A Y ++    G+L F + ++I +T + + +W+ G +  ++  F
Sbjct: 17  KALYDFEPENDGELGFREGDLITLTNQIDENWYEGMLHGQSGFF 60

>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus} Length = 73

 Score = 43.8 bits (104), Expect = 2e-06
 Identities = 12/32 (37%), Positives = 19/32 (59%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVE 314
           G ++ +    +  W  G L GQ+G+FP SYV+
Sbjct: 35  GDLITLTNQIDENWYEGMLHGQSGFFPLSYVQ 66

>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 70

 Score = 71.9 bits (177), Expect = 2e-16
 Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 4/61 (6%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR--GQTGWFPESYVE 224
           S    YRA+Y++  +N DEL  + GD +   V Q  + GW  G  R   + G FP +YV 
Sbjct: 5   SSGTPYRAMYQYRPQNEDELELREGDRVD--VMQQCDDGWFVGVSRRTQKFGTFPGNYVA 62

Query: 225 P 225
           P
Sbjct: 63  P 63

>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 70

 Score = 40.3 bits (95), Expect = 3e-05
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 2/35 (5%)

Query: 283 GTVVPVKQNAEPGWLAGELR--GQTGWFPESYVEP 315
           G  V V Q  + GW  G  R   + G FP +YV P
Sbjct: 29  GDRVDVMQQCDDGWFVGVSRRTQKFGTFPGNYVAP 63

>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 81

 Score = 72.0 bits (177), Expect = 2e-16
 Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 2/70 (2%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET 229
               A+++ V+    EL+F+ GD+I V    N    W  G++  + GWFP S+V      
Sbjct: 11  VSAEAVWDHVTMANRELAFKAGDVIKVLDASN--KDWWWGQIDDEEGWFPASFVRLWVNQ 68

Query: 230 GEVVPGTELP 239
            + V     P
Sbjct: 69  EDEVEEGSGP 78

>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 81

 Score = 51.6 bits (124), Expect = 5e-09
 Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 119 YYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTIGDRTARF 163
              A + + +    +L F   +VI V    N DWW G I D    F
Sbjct: 12  SAEAVWDHVTMANRELAFKAGDVIKVLDASNKDWWWGQIDDEEGWF 57

>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 81

 Score = 45.5 bits (108), Expect = 8e-07
 Identities = 13/47 (27%), Positives = 20/47 (42%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVPGTELP 329
           G V+ V   +   W  G++  + GWFP S+V       + V     P
Sbjct: 32  GDVIKVLDASNKDWWWGQIDDEEGWFPASFVRLWVNQEDEVEEGSGP 78

>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88

 Score = 72.5 bits (178), Expect = 2e-16
 Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 2/70 (2%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET 229
           R+ RA+Y+F +   +EL+F+ G+II+V +  + +  W  GE     G FP ++V      
Sbjct: 18  RKVRALYDFEAVEDNELTFKHGEIIIV-LDDS-DANWWKGENHRGIGLFPSNFVTTNLNI 75

Query: 230 GEVVPGTELP 239
                    P
Sbjct: 76  ETEAAAVSGP 85

>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88

 Score = 48.6 bits (116), Expect = 6e-08
 Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 121 IAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTIGDRTARF 163
            A Y +++ E  +LTF   E+I V    + +WW G        F
Sbjct: 21  RALYDFEAVEDNELTFKHGEIIIVLDDSDANWWKGENHRGIGLF 64

>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88

 Score = 44.0 bits (104), Expect = 3e-06
 Identities = 10/47 (21%), Positives = 17/47 (36%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVPGTELP 329
           G ++ V  +++  W  GE     G FP ++V               P
Sbjct: 39  GEIIIVLDDSDANWWKGENHRGIGLFPSNFVTTNLNIETEAAAVSGP 85

>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae} Length = 59

 Score = 71.4 bits (176), Expect = 2e-16
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 4/57 (7%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL--RGQTGWFPESYVE 224
           +R  A+Y+F   N +EL    GDI+ +   ++   GWL  E     +TG  PE +V 
Sbjct: 2   QRAVALYDFEPENDNELRLAEGDIVFI-SYKH-GQGWLVAENESGSKTGLVPEEFVS 56

>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae} Length = 59

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 2/34 (5%)

Query: 283 GTVVPVKQNAEPGWLAGEL--RGQTGWFPESYVE 314
           G +V +      GWL  E     +TG  PE +V 
Sbjct: 23  GDIVFISYKHGQGWLVAENESGSKTGLVPEEFVS 56

>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A Length = 63

 Score = 71.5 bits (176), Expect = 2e-16
 Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 1/56 (1%)

Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD 227
           + A+Y+FV+   + LS   G+ + V +  N    W   + +   GW P +Y+ P +
Sbjct: 8   FVALYDFVASGDNTLSITKGEKLRV-LGYNHNGEWCEAQTKNGQGWVPSAYITPVN 62

>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A Length = 63

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 7/30 (23%), Positives = 13/30 (43%)

Query: 288 VKQNAEPGWLAGELRGQTGWFPESYVEPCD 317
           +  N    W   + +   GW P +Y+ P +
Sbjct: 33  LGYNHNGEWCEAQTKNGQGWVPSAYITPVN 62

>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 80

 Score = 71.8 bits (176), Expect = 3e-16
 Identities = 15/64 (23%), Positives = 23/64 (35%), Gaps = 2/64 (3%)

Query: 165 GVSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           G S    Y     +      E+SF  G  + V +++  E GW         GW P  Y+ 
Sbjct: 4   GSSGATSYMTCSAYQKVQDSEISFPAGVEVQV-LEKQ-ESGWWYVRFGELEGWAPSHYLV 61

Query: 225 PCDE 228
             + 
Sbjct: 62  LDEN 65

>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 80

 Score = 48.6 bits (116), Expect = 5e-08
 Identities = 9/46 (19%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 116 SDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRT 160
               Y+    Y   +  +++F     + V +K E+ WW    G+  
Sbjct: 7   GATSYMTCSAYQKVQDSEISFPAGVEVQVLEKQESGWWYVRFGELE 52

>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 80

 Score = 44.0 bits (104), Expect = 3e-06
 Identities = 10/36 (27%), Positives = 13/36 (36%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE 318
           G  V V +  E GW         GW P  Y+   + 
Sbjct: 30  GVEVQVLEKQESGWWYVRFGELEGWAPSHYLVLDEN 65

>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens} Length = 68

 Score = 71.1 bits (175), Expect = 3e-16
 Identities = 18/62 (29%), Positives = 37/62 (59%), Gaps = 1/62 (1%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC 226
           S    Y A+ +F ++   +L+F+ G+I++V +++  +  W+A + +G  G  P +Y+EP 
Sbjct: 8   STGEEYIAVGDFTAQQVGDLTFKKGEILLV-IEKKPDGWWIAKDAKGNEGLVPRTYLEPY 66

Query: 227 DE 228
            E
Sbjct: 67  SE 68

>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens} Length = 68

 Score = 41.1 bits (97), Expect = 2e-05
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 283 GTVVPVKQNAEPGW-LAGELRGQTGWFPESYVEPCDE 318
           G ++ V +    GW +A + +G  G  P +Y+EP  E
Sbjct: 32  GEILLVIEKKPDGWWIAKDAKGNEGLVPRTYLEPYSE 68

>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens} Length = 72

 Score = 71.2 bits (175), Expect = 4e-16
 Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 2/58 (3%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
            E R+ RAIY+F +   +EL+F+ G+II V +  + +P W  GE     G FP ++V 
Sbjct: 15  HEARKVRAIYDFEAAEDNELTFKAGEIITV-LDDS-DPNWWKGETHQGIGLFPSNFVT 70

>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens} Length = 72

 Score = 51.2 bits (123), Expect = 5e-09
 Identities = 13/63 (20%), Positives = 24/63 (38%), Gaps = 1/63 (1%)

Query: 102 SNLDDLKKTLANMMSDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTIGDRT 160
            +       + +    +   A Y +++ E  +LTF   E+I V    + +WW G      
Sbjct: 2   GHHHHHHSHMNHQHEARKVRAIYDFEAAEDNELTFKAGEIITVLDDSDPNWWKGETHQGI 61

Query: 161 ARF 163
             F
Sbjct: 62  GLF 64

>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens} Length = 72

 Score = 40.8 bits (96), Expect = 3e-05
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVE 314
           G ++ V  +++P W  GE     G FP ++V 
Sbjct: 39  GEIITVLDDSDPNWWKGETHQGIGLFPSNFVT 70

>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold protein 1, islet-brain-1, IB-1, mitogen-activated P kinase 8-interacting protein 1; 3.00A {Rattus norvegicus} Length = 71

 Score = 71.2 bits (175), Expect = 4e-16
 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 4/69 (5%)

Query: 165 GVSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR--GQTGWFPESY 222
           G    + +RAI+ FV R+ DEL  +  D ++V ++  AE  W        G  G FP  Y
Sbjct: 2   GEEHEQTHRAIFRFVPRHEDELELEVDDPLLVELQ--AEDYWYEAYNMRTGARGVFPAYY 59

Query: 223 VEPCDETGE 231
                +  E
Sbjct: 60  AIEVTKEPE 68

>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold protein 1, islet-brain-1, IB-1, mitogen-activated P kinase 8-interacting protein 1; 3.00A {Rattus norvegicus} Length = 71

 Score = 38.0 bits (89), Expect = 2e-04
 Identities = 10/41 (24%), Positives = 13/41 (31%), Gaps = 2/41 (4%)

Query: 283 GTVVPVKQNAEPGWLAGELR--GQTGWFPESYVEPCDETGE 321
              + V+  AE  W        G  G FP  Y     +  E
Sbjct: 28  DDPLLVELQAEDYWYEAYNMRTGARGVFPAYYAIEVTKEPE 68

>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 69

 Score = 70.8 bits (174), Expect = 4e-16
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 3/63 (4%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQ-TGWFPESYVEP 225
           S  R  +A+Y++ ++  DEL+F  G +I    K+    GW  G+   +   +FP +YVE 
Sbjct: 5   SSGRTVKALYDYKAKRSDELTFCRGALIHNVSKE--PGGWWKGDYGTRIQQYFPSNYVED 62

Query: 226 CDE 228
              
Sbjct: 63  ISG 65

>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 69

 Score = 48.4 bits (116), Expect = 4e-08
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)

Query: 116 SDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEND-WWTGTIGDR 159
           S +   A Y Y +    +LTF +  +I+   KE   WW G  G R
Sbjct: 6   SGRTVKALYDYKAKRSDELTFCRGALIHNVSKEPGGWWKGDYGTR 50

>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 69

 Score = 38.8 bits (91), Expect = 1e-04
 Identities = 9/37 (24%), Positives = 15/37 (40%), Gaps = 1/37 (2%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQ-TGWFPESYVEPCDE 318
           G ++        GW  G+   +   +FP +YVE    
Sbjct: 29  GALIHNVSKEPGGWWKGDYGTRIQQYFPSNYVEDISG 65

>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae} Length = 73

 Score = 70.8 bits (174), Expect = 5e-16
 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 4/64 (6%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE--LRGQTGWFPESYVEPCD 227
           +R  A+Y+F   N +EL    GDI+ +   ++   GWL  E     +TG  PE +V    
Sbjct: 6   QRAVALYDFEPENDNELRLAEGDIVFI-SYKH-GQGWLVAENESGSKTGLVPEEFVSYIQ 63

Query: 228 ETGE 231
              E
Sbjct: 64  PELE 67

>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae} Length = 73

 Score = 40.8 bits (96), Expect = 3e-05
 Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)

Query: 283 GTVVPVKQNAEPGWLAGE--LRGQTGWFPESYVEPCDETGE 321
           G +V +      GWL  E     +TG  PE +V       E
Sbjct: 27  GDIVFISYKHGQGWLVAENESGSKTGLVPEEFVSYIQPELE 67

>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 75

 Score = 70.5 bits (173), Expect = 6e-16
 Identities = 16/74 (21%), Positives = 28/74 (37%), Gaps = 8/74 (10%)

Query: 164 RGVSEYRRYRAIYEFVSRNG-------DELSFQPGDIIMVPVKQNAEPGWLAGELRGQTG 216
              S  +   A  ++   +G         L+ + GD++MV      + G+  GEL G  G
Sbjct: 2   SSGSSGKIMIAALDYDPGDGQMGGQGKGRLALRAGDVVMV-YGPMDDQGFYYGELGGHRG 60

Query: 217 WFPESYVEPCDETG 230
             P   ++     G
Sbjct: 61  LVPAHLLDHMSLHG 74

>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 75

 Score = 43.5 bits (103), Expect = 3e-06
 Identities = 8/28 (28%), Positives = 12/28 (42%)

Query: 293 EPGWLAGELRGQTGWFPESYVEPCDETG 320
           + G+  GEL G  G  P   ++     G
Sbjct: 47  DQGFYYGELGGHRGLVPAHLLDHMSLHG 74

>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1 Length = 83

 Score = 70.9 bits (174), Expect = 7e-16
 Identities = 12/62 (19%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC 226
           +      A+Y++  ++  E++ + GDI+   +  +    W   E+  + G+ P +YV+  
Sbjct: 15  TGKELVLALYDYQEKSPREVTMKKGDILT--LLNSTNKDWWKVEVNDRQGFVPAAYVKKL 72

Query: 227 DE 228
             
Sbjct: 73  AA 74

>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1 Length = 83

 Score = 53.6 bits (129), Expect = 1e-09
 Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 1/49 (2%)

Query: 116 SDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTIGDRTARF 163
             +  +A Y Y    P ++T  + +++ +    N DWW   + DR    
Sbjct: 16  GKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFV 64

>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1 Length = 83

 Score = 42.8 bits (101), Expect = 7e-06
 Identities = 7/36 (19%), Positives = 16/36 (44%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE 318
           G ++ +  +    W   E+  + G+ P +YV+    
Sbjct: 39  GDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLAA 74

>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 79

 Score = 70.5 bits (173), Expect = 7e-16
 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
                  A+Y++ +   DE+SF P DII   ++   + GW  G  +G+ G FP +YVE
Sbjct: 15  DLGITAVALYDYQAAGDDEISFDPDDIITN-IEMI-DDGWWRGVCKGRYGLFPANYVE 70

>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 79

 Score = 46.6 bits (111), Expect = 3e-07
 Identities = 11/45 (24%), Positives = 21/45 (46%), Gaps = 1/45 (2%)

Query: 120 YIAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTIGDRTARF 163
            +A Y Y +    +++F+ D++I   +  +  WW G    R   F
Sbjct: 20  AVALYDYQAAGDDEISFDPDDIITNIEMIDDGWWRGVCKGRYGLF 64

>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 79

 Score = 41.6 bits (98), Expect = 1e-05
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVE 314
             ++   +  + GW  G  +G+ G FP +YVE
Sbjct: 39  DDIITNIEMIDDGWWRGVCKGRYGLFPANYVE 70

>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} PDB: 2d1x_A Length = 65

 Score = 70.0 bits (172), Expect = 8e-16
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 2/55 (3%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
               A+Y++ +   DE+SF P DII   ++   + GW  G  +G+ G FP +YVE
Sbjct: 10  ITAIALYDYQAAGDDEISFDPDDIITN-IEMI-DDGWWRGVCKGRYGLFPANYVE 62

>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} PDB: 2d1x_A Length = 65

 Score = 48.4 bits (116), Expect = 5e-08
 Identities = 12/45 (26%), Positives = 21/45 (46%), Gaps = 1/45 (2%)

Query: 120 YIAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTIGDRTARF 163
            IA Y Y +    +++F+ D++I   +  +  WW G    R   F
Sbjct: 12  AIALYDYQAAGDDEISFDPDDIITNIEMIDDGWWRGVCKGRYGLF 56

>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} PDB: 2d1x_A Length = 65

 Score = 41.1 bits (97), Expect = 2e-05
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVE 314
             ++   +  + GW  G  +G+ G FP +YVE
Sbjct: 31  DDIITNIEMIDDGWWRGVCKGRYGLFPANYVE 62

>1x6b_A RHO guanine exchange factor (GEF) 16; SH3 domain, neuroblastoma, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 79

 Score = 70.1 bits (172), Expect = 1e-15
 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 5/57 (8%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR--GQTGWFPESYVEP 225
           +      F ++  DE++ Q  D+++V  +   E GWL GE    G+TGWFPE +   
Sbjct: 19  QVEITKAFFAKQADEVTLQQADVVLVLQQ---EDGWLYGERLRDGETGWFPEDFARF 72

>1x6b_A RHO guanine exchange factor (GEF) 16; SH3 domain, neuroblastoma, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 79

 Score = 39.3 bits (92), Expect = 1e-04
 Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 3/35 (8%)

Query: 283 GTVVPVKQNAEPGWLAGELR--GQTGWFPESYVEP 315
             VV V Q  E GWL GE    G+TGWFPE +   
Sbjct: 39  ADVVLVLQQ-EDGWLYGERLRDGETGWFPEDFARF 72

>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus} Length = 60

 Score = 69.5 bits (171), Expect = 1e-15
 Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 2/52 (3%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
            A +++V R+  ELSF+ G  +++     A   W  G   G  G  P  Y+ 
Sbjct: 10  IAKFDYVGRSARELSFKKGASLLL--YHRASEDWWEGRHNGIDGLVPHQYIV 59

>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus} Length = 60

 Score = 53.4 bits (129), Expect = 8e-10
 Identities = 9/47 (19%), Positives = 18/47 (38%), Gaps = 1/47 (2%)

Query: 118 KYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTARF 163
           ++ IA + Y      +L+F +   + +  +   DWW G         
Sbjct: 7   EFAIAKFDYVGRSARELSFKKGASLLLYHRASEDWWEGRHNGIDGLV 53

>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus} Length = 60

 Score = 42.2 bits (100), Expect = 5e-06
 Identities = 8/32 (25%), Positives = 11/32 (34%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVE 314
           G  + +   A   W  G   G  G  P  Y+ 
Sbjct: 28  GASLLLYHRASEDWWEGRHNGIDGLVPHQYIV 59

>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 88

 Score = 70.2 bits (172), Expect = 1e-15
 Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 2/60 (3%)

Query: 169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE 228
           + +        + +   L+ + GDI+ V  + N   G   GE+ G+ G FP ++V+  D 
Sbjct: 18  FAKAIQKRVPCAYDKTALALEVGDIVKV-TRMN-INGQWEGEVNGRKGLFPFTHVKIFDP 75

>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 88

 Score = 46.3 bits (110), Expect = 4e-07
 Identities = 12/36 (33%), Positives = 19/36 (52%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE 318
           G +V V +    G   GE+ G+ G FP ++V+  D 
Sbjct: 40  GDIVKVTRMNINGQWEGEVNGRKGLFPFTHVKIFDP 75

>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 88

 Score = 45.9 bits (109), Expect = 7e-07
 Identities = 9/44 (20%), Positives = 16/44 (36%), Gaps = 1/44 (2%)

Query: 121 IAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTARF 163
           I      + +   L     +++ VT+   N  W G +  R   F
Sbjct: 22  IQKRVPCAYDKTALALEVGDIVKVTRMNINGQWEGEVNGRKGLF 65

>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A Length = 69

 Score = 69.7 bits (171), Expect = 1e-15
 Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 5/70 (7%)

Query: 168 EYRRYRAIYEFV-SRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR--GQTGWFPESYVE 224
           +  ++ A Y+F  S +  EL  + GDI+ +   ++   GW   +L    + GW P +Y+ 
Sbjct: 1   KDPKFEAAYDFPGSGSSSELPLKKGDIVFI--SRDEPSGWSLAKLLDGSKEGWVPTAYMT 58

Query: 225 PCDETGEVVP 234
           P  +T   VP
Sbjct: 59  PYKDTRNTVP 68

>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A Length = 69

 Score = 45.8 bits (109), Expect = 5e-07
 Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 283 GTVVPVKQNAEPGWLAGELR--GQTGWFPESYVEPCDETGEVVP 324
           G +V + ++   GW   +L    + GW P +Y+ P  +T   VP
Sbjct: 25  GDIVFISRDEPSGWSLAKLLDGSKEGWVPTAYMTPYKDTRNTVP 68

>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 68

 Score = 69.2 bits (170), Expect = 2e-15
 Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 2/59 (3%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
           S  +  + +Y+F +RN +ELS    +++   V ++    W      GQ G+ P + +  
Sbjct: 5   SSGKYVKILYDFTARNANELSVLKDEVLE--VLEDGRQWWKLRSRSGQAGYVPCNILGE 61

>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 68

 Score = 49.9 bits (120), Expect = 1e-08
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 116 SDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWW 152
           S KY    Y + +    +L+  +DEV+ V +    WW
Sbjct: 6   SGKYVKILYDFTARNANELSVLKDEVLEVLEDGRQWW 42

>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 68

 Score = 40.7 bits (96), Expect = 3e-05
 Identities = 7/33 (21%), Positives = 13/33 (39%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEP 315
             V+ V ++    W      GQ G+ P + +  
Sbjct: 29  DEVLEVLEDGRQWWKLRSRSGQAGYVPCNILGE 61

>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo sapiens} Length = 69

 Score = 68.5 bits (168), Expect = 3e-15
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNA-EPGWLAGELRGQTGWFPESYVEPCDETGE 231
           +A+Y+ V+ + DELSF+ GDI+ V  +      GW    L G+ G  P + ++      +
Sbjct: 7   KALYDNVAESPDELSFRKGDIMTVLEQDTQGLDGWWLCSLHGRQGIVPGNRLKILVGMYD 66

Query: 232 VVP 234
             P
Sbjct: 67  KKP 69

>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo sapiens} Length = 69

 Score = 49.6 bits (119), Expect = 2e-08
 Identities = 9/47 (19%), Positives = 21/47 (44%), Gaps = 4/47 (8%)

Query: 121 IAAYPYDSTEPGDLTFNQDEVIYVTKK----ENDWWTGTIGDRTARF 163
            A Y   +  P +L+F + +++ V ++     + WW  ++  R    
Sbjct: 7   KALYDNVAESPDELSFRKGDIMTVLEQDTQGLDGWWLCSLHGRQGIV 53

>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo sapiens} Length = 69

 Score = 40.4 bits (95), Expect = 3e-05
 Identities = 9/41 (21%), Positives = 15/41 (36%)

Query: 284 TVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVP 324
           TV+        GW    L G+ G  P + ++      +  P
Sbjct: 29  TVLEQDTQGLDGWWLCSLHGRQGIVPGNRLKILVGMYDKKP 69

>1wie_A RIM binding protein 2; beta barrel, KIAA0318 protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 96

 Score = 69.2 bits (169), Expect = 4e-15
 Identities = 21/87 (24%), Positives = 33/87 (37%), Gaps = 8/87 (9%)

Query: 160 TARFRGVSEYRRYRAIYEFVSRNG------DELSFQPGDIIMVPVKQNAEPGWLAGE-LR 212
           T++ R   +     A Y +   +G       EL    G  + V      E G+  GE L 
Sbjct: 8   TSKQRYSGKVHLCVARYSYNPFDGPNENPEAELPLTAGKYLYV-YGDMDEDGFYEGELLD 66

Query: 213 GQTGWFPESYVEPCDETGEVVPGTELP 239
           GQ G  P ++V+   +    +  T  P
Sbjct: 67  GQRGLVPSNFVDFVQDNESRLASTSGP 93

>1wie_A RIM binding protein 2; beta barrel, KIAA0318 protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 96

 Score = 42.6 bits (100), Expect = 1e-05
 Identities = 12/43 (27%), Positives = 18/43 (41%), Gaps = 1/43 (2%)

Query: 288 VKQNAEPGWLAGE-LRGQTGWFPESYVEPCDETGEVVPGTELP 329
                E G+  GE L GQ G  P ++V+   +    +  T  P
Sbjct: 51  YGDMDEDGFYEGELLDGQRGLVPSNFVDFVQDNESRLASTSGP 93

>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A Length = 67

 Score = 68.1 bits (167), Expect = 4e-15
 Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 4/59 (6%)

Query: 173 RAIYEFV--SRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET 229
           +AI + V  + +   L+ + GDI+ V  + N   G   GE+ G+ G FP ++V+  D  
Sbjct: 5   KAIQKRVPCAYDKTALALEVGDIVKV-TRMN-INGQWEGEVNGRKGLFPFTHVKIFDPQ 61

>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A Length = 67

 Score = 45.8 bits (109), Expect = 5e-07
 Identities = 12/37 (32%), Positives = 19/37 (51%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET 319
           G +V V +    G   GE+ G+ G FP ++V+  D  
Sbjct: 25  GDIVKVTRMNINGQWEGEVNGRKGLFPFTHVKIFDPQ 61

>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A Length = 67

 Score = 43.1 bits (102), Expect = 3e-06
 Identities = 9/44 (20%), Positives = 16/44 (36%), Gaps = 1/44 (2%)

Query: 121 IAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTARF 163
           I      + +   L     +++ VT+   N  W G +  R   F
Sbjct: 7   IQKRVPCAYDKTALALEVGDIVKVTRMNINGQWEGEVNGRKGLF 50

>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate repeat-containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2kea_A Length = 73

 Score = 68.2 bits (167), Expect = 4e-15
 Identities = 15/64 (23%), Positives = 23/64 (35%), Gaps = 2/64 (3%)

Query: 165 GVSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           G     R    +     + D L  + GDII + + +    G   G L  + G F   YV+
Sbjct: 7   GFCGRARVHTDFTPSPYDTDSLKLKKGDIIDI-ISKP-PMGTWMGLLNNKVGTFKFIYVD 64

Query: 225 PCDE 228
               
Sbjct: 65  VLSS 68

>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate repeat-containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2kea_A Length = 73

 Score = 44.3 bits (105), Expect = 2e-06
 Identities = 8/36 (22%), Positives = 13/36 (36%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE 318
           G ++ +      G   G L  + G F   YV+    
Sbjct: 33  GDIIDIISKPPMGTWMGLLNNKVGTFKFIYVDVLSS 68

>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate repeat-containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2kea_A Length = 73

 Score = 43.9 bits (104), Expect = 2e-06
 Identities = 6/44 (13%), Positives = 15/44 (34%), Gaps = 1/44 (2%)

Query: 121 IAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTARF 163
              +     +   L   + ++I +  K     W G + ++   F
Sbjct: 15  HTDFTPSPYDTDSLKLKKGDIIDIISKPPMGTWMGLLNNKVGTF 58

>3i5r_A Phosphatidylinositol 3-kinase regulatory subunit alpha; SH3 domain, peptide complex, alternative splicing, disease mutation, HOST-virus interaction, phosphoprotein, polymorphism; 1.70A {Homo sapiens} PDB: 3i5s_A 1pht_A 1pnj_A 2pni_A 1pks_A 1pkt_A Length = 83

 Score = 68.6 bits (167), Expect = 4e-15
 Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 15/74 (20%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVP-------------VKQNAEPGWLAG--EL 211
           +E  +YRA+Y++     +++    GDI+ V                +  E GWL G  E 
Sbjct: 3   AEGYQYRALYDYKKEREEDIDLHLGDILTVNKGSLVALGFSDGQEARPEEIGWLNGYNET 62

Query: 212 RGQTGWFPESYVEP 225
            G+ G FP +YVE 
Sbjct: 63  TGERGDFPGTYVEY 76

>3i5r_A Phosphatidylinositol 3-kinase regulatory subunit alpha; SH3 domain, peptide complex, alternative splicing, disease mutation, HOST-virus interaction, phosphoprotein, polymorphism; 1.70A {Homo sapiens} PDB: 3i5s_A 1pht_A 1pnj_A 2pni_A 1pks_A 1pkt_A Length = 83

 Score = 38.1 bits (88), Expect = 3e-04
 Identities = 19/69 (27%), Positives = 26/69 (37%), Gaps = 10/69 (14%)

Query: 249 AEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAG--ELRGQTG 306
            E  E+I    G  + V +G  +                  +  E GWL G  E  G+ G
Sbjct: 16  KEREEDIDLHLGDILTVNKGSLVALGFSDGQ--------EARPEEIGWLNGYNETTGERG 67

Query: 307 WFPESYVEP 315
            FP +YVE 
Sbjct: 68  DFPGTYVEY 76

>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1 Length = 65

 Score = 67.6 bits (166), Expect = 7e-15
 Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE 228
              RA+++F   + ++L F+ GDI+ +   +  E  W A +  G+ G  P  YVE    
Sbjct: 4   EYVRALFDFNGNDEEDLPFKKGDILRI-RDKPEEQWWNAEDSEGKRGMIPVPYVEKYHH 61

>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1 Length = 65

 Score = 48.8 bits (117), Expect = 3e-08
 Identities = 9/40 (22%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 116 SDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTG 154
           S +Y  A + ++  +  DL F + +++ +  K    WW  
Sbjct: 2   SAEYVRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNA 41

>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1 Length = 65

 Score = 37.6 bits (88), Expect = 3e-04
 Identities = 10/37 (27%), Positives = 15/37 (40%), Gaps = 1/37 (2%)

Query: 283 GTVVPVKQNAEPGWLAGE-LRGQTGWFPESYVEPCDE 318
           G ++ ++   E  W   E   G+ G  P  YVE    
Sbjct: 25  GDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEKYHH 61

>2rf0_A Mitogen-activated protein kinase kinase kinase 10; MAP3K10, MLK2, SH3 domain, TKL kinase, MKN28, structural GEN structural genomics consortium, SGC; 2.00A {Homo sapiens} Length = 89

 Score = 68.3 bits (167), Expect = 8e-15
 Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 4/59 (6%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMV---PVKQNAEPGWLAGEL-RGQTGWFPESYVEP 225
            + A++++ +   +EL+ + GD + V       + + GW  G+L  G+ G FP +YV P
Sbjct: 31  VWTAVFDYEAAGDEELTLRRGDRVQVLSQDCAVSGDEGWWTGQLPSGRVGVFPSNYVAP 89

>2rf0_A Mitogen-activated protein kinase kinase kinase 10; MAP3K10, MLK2, SH3 domain, TKL kinase, MKN28, structural GEN structural genomics consortium, SGC; 2.00A {Homo sapiens} Length = 89

 Score = 38.7 bits (90), Expect = 3e-04
 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 1/28 (3%)

Query: 289 KQNAEPGWLAGEL-RGQTGWFPESYVEP 315
             + + GW  G+L  G+ G FP +YV P
Sbjct: 62  AVSGDEGWWTGQLPSGRVGVFPSNYVAP 89

>2gqi_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 71

 Score = 67.3 bits (165), Expect = 8e-15
 Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 5/62 (8%)

Query: 170 RRYRAIYEFV-SRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR--GQTGWFPESYVEPC 226
           RR RAI  +    + DE+SF  GD+ +V      E GW+        + G   E  VE  
Sbjct: 8   RRVRAILPYTKVPDTDEISFLKGDMFIV--HNELEDGWMWVTNLRTDEQGLIVEDLVEEV 65

Query: 227 DE 228
             
Sbjct: 66  SG 67

>2gqi_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 71

 Score = 38.4 bits (90), Expect = 2e-04
 Identities = 9/38 (23%), Positives = 12/38 (31%), Gaps = 2/38 (5%)

Query: 283 GTVVPVKQNAEPGWLAGELR--GQTGWFPESYVEPCDE 318
           G +  V    E GW+        + G   E  VE    
Sbjct: 30  GDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEVSG 67

>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A Length = 61

 Score = 66.9 bits (164), Expect = 9e-15
 Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 3/54 (5%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTG-WFPESYVEP 225
           +A++++ ++  DEL+F    II   V++  + GW  G+  G+   WFP +YVE 
Sbjct: 7   KALFDYKAQREDELTFTKSAIIQN-VEKQ-DGGWWRGDYGGKKQLWFPSNYVEE 58

>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A Length = 61

 Score = 50.7 bits (122), Expect = 7e-09
 Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 121 IAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTIGDRT 160
            A + Y +    +LTF +  +I   +K++  WW G  G + 
Sbjct: 7   KALFDYKAQREDELTFTKSAIIQNVEKQDGGWWRGDYGGKK 47

>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A Length = 61

 Score = 36.4 bits (85), Expect = 6e-04
 Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTG-WFPESYVEP 315
             ++   +  + GW  G+  G+   WFP +YVE 
Sbjct: 25  SAIIQNVEKQDGGWWRGDYGGKKQLWFPSNYVEE 58

>1hsq_A Phospholipase C-gamma (SH3 domain); phosphoric diester hydrolase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2hsp_A Length = 71

 Score = 67.3 bits (165), Expect = 1e-14
 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTG-WFPESYVEPCDETGE 231
           +A++++ ++  DEL+F    II    KQ  E GW  G+  G+   WFP +YVE       
Sbjct: 10  KALFDYKAQREDELTFIKSAIIQNVEKQ--EGGWWRGDYGGKKQLWFPSNYVEEMVNPEG 67

Query: 232 V 232
           +
Sbjct: 68  I 68

>1hsq_A Phospholipase C-gamma (SH3 domain); phosphoric diester hydrolase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2hsp_A Length = 71

 Score = 49.6 bits (119), Expect = 2e-08
 Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 1/41 (2%)

Query: 121 IAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTIGDRT 160
            A + Y +    +LTF +  +I   +K+   WW G  G + 
Sbjct: 10  KALFDYKAQREDELTFIKSAIIQNVEKQEGGWWRGDYGGKK 50

>1hsq_A Phospholipase C-gamma (SH3 domain); phosphoric diester hydrolase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2hsp_A Length = 71

 Score = 38.4 bits (90), Expect = 2e-04
 Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 1/41 (2%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTG-WFPESYVEPCDETGEV 322
             ++   +  E GW  G+  G+   WFP +YVE       +
Sbjct: 28  SAIIQNVEKQEGGWWRGDYGGKKQLWFPSNYVEEMVNPEGI 68

>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens} Length = 69

 Score = 67.0 bits (164), Expect = 1e-14
 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 3/68 (4%)

Query: 166 VSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL-RGQTGWFPESYVE 224
           V       A+Y++ +   DEL+   GDII V  K      W  G + +GQ G+FP ++V 
Sbjct: 3   VDTAPTVVALYDYTANRSDELTIHRGDIIRVFFKD--NEDWWYGSIGKGQEGYFPANHVA 60

Query: 225 PCDETGEV 232
                 E+
Sbjct: 61  SETLYQEL 68

>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens} Length = 69

 Score = 48.1 bits (115), Expect = 6e-08
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 116 SDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGD 158
           +    +A Y Y +    +LT ++ ++I V  K   DWW G+IG 
Sbjct: 5   TAPTVVALYDYTANRSDELTIHRGDIIRVFFKDNEDWWYGSIGK 48

>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens} Length = 69

 Score = 38.5 bits (90), Expect = 2e-04
 Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 1/41 (2%)

Query: 283 GTVVPVKQNAEPGWLAGEL-RGQTGWFPESYVEPCDETGEV 322
           G ++ V       W  G + +GQ G+FP ++V       E+
Sbjct: 28  GDIIRVFFKDNEDWWYGSIGKGQEGYFPANHVASETLYQEL 68

>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A Length = 57

 Score = 66.4 bits (163), Expect = 1e-14
 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
              RA+++F   + ++L F+ GDI+ +   +  E  W A +  G+ G  P  YVE 
Sbjct: 2   EYVRALFDFNGNDEEDLPFKKGDILRI-RDKPEEQWWNAEDSEGKRGMIPVPYVEK 56

>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A Length = 57

 Score = 49.8 bits (120), Expect = 1e-08
 Identities = 9/38 (23%), Positives = 19/38 (50%), Gaps = 1/38 (2%)

Query: 118 KYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTG 154
           +Y  A + ++  +  DL F + +++ +  K E  WW  
Sbjct: 2   EYVRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNA 39

>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A Length = 57

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 1/34 (2%)

Query: 283 GTVVPVKQNAEPGWLAGE-LRGQTGWFPESYVEP 315
           G ++ ++   E  W   E   G+ G  P  YVE 
Sbjct: 23  GDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEK 56

>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens} Length = 67

 Score = 67.0 bits (164), Expect = 1e-14
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 4/58 (6%)

Query: 173 RAIYEFVS--RNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE 228
           R I + V    +   L+ + G+++ V  K N   G   GE  G+ G FP ++V   D+
Sbjct: 10  RVIQKRVPNAYDKTALALEVGELVKV-TKIN-VSGQWEGECNGKRGHFPFTHVRLLDQ 65

>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens} Length = 67

 Score = 45.0 bits (107), Expect = 9e-07
 Identities = 12/36 (33%), Positives = 18/36 (50%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE 318
           G +V V +    G   GE  G+ G FP ++V   D+
Sbjct: 30  GELVKVTKINVSGQWEGECNGKRGHFPFTHVRLLDQ 65

>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens} Length = 67

 Score = 42.3 bits (100), Expect = 6e-06
 Identities = 9/44 (20%), Positives = 16/44 (36%), Gaps = 1/44 (2%)

Query: 121 IAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTARF 163
           I     ++ +   L     E++ VTK   +  W G    +   F
Sbjct: 12  IQKRVPNAYDKTALALEVGELVKVTKINVSGQWEGECNGKRGHF 55

>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens} Length = 68

 Score = 66.9 bits (164), Expect = 1e-14
 Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 2/61 (3%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC 226
           S   + + +YEF +RN  EL+   G+ +   V  +++  WL     G++G+ P + +EP 
Sbjct: 5   SSGLKMQVLYEFEARNPRELTVVQGEKLE--VLDHSKRWWLVKNEAGRSGYIPSNILEPL 62

Query: 227 D 227
            
Sbjct: 63  S 63

>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens} Length = 68

 Score = 48.0 bits (115), Expect = 6e-08
 Identities = 10/37 (27%), Positives = 15/37 (40%)

Query: 116 SDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWW 152
           S       Y +++  P +LT  Q E + V      WW
Sbjct: 6   SGLKMQVLYEFEARNPRELTVVQGEKLEVLDHSKRWW 42

>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens} Length = 68

 Score = 39.9 bits (94), Expect = 4e-05
 Identities = 9/35 (25%), Positives = 18/35 (51%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD 317
           G  + V  +++  WL     G++G+ P + +EP  
Sbjct: 29  GEKLEVLDHSKRWWLVKNEAGRSGYIPSNILEPLS 63

>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 80

 Score = 66.3 bits (162), Expect = 3e-14
 Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 7/70 (10%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRG-----QTGWFPES 221
           S     +    +V+   ++LS  PG +I++  K     GW  GEL+      Q GWFP S
Sbjct: 5   SSGEIAQVTSAYVASGSEQLSLAPGQLILILKKN--TSGWWQGELQARGKKRQKGWFPAS 62

Query: 222 YVEPCDETGE 231
           +V+    + E
Sbjct: 63  HVKLLGPSSE 72

>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 80

 Score = 38.6 bits (90), Expect = 2e-04
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 5/44 (11%)

Query: 283 GTVVPVKQNAEPGWLAGELRG-----QTGWFPESYVEPCDETGE 321
           G ++ + +    GW  GEL+      Q GWFP S+V+    + E
Sbjct: 29  GQLILILKKNTSGWWQGELQARGKKRQKGWFPASHVKLLGPSSE 72

>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A Length = 65

 Score = 65.9 bits (161), Expect = 3e-14
 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 5/60 (8%)

Query: 170 RRYRAIYEFV-SRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR--GQTGWFPESYVEPC 226
           RR RAI  +    + DE+SF  GD+ +  V    E GW+        + G   E  VE  
Sbjct: 6   RRVRAILPYTKVPDTDEISFLKGDMFI--VHNELEDGWMWVTNLRTDEQGLIVEDLVEEV 63

>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A Length = 65

 Score = 37.8 bits (88), Expect = 3e-04
 Identities = 9/36 (25%), Positives = 12/36 (33%), Gaps = 2/36 (5%)

Query: 283 GTVVPVKQNAEPGWLAGELR--GQTGWFPESYVEPC 316
           G +  V    E GW+        + G   E  VE  
Sbjct: 28  GDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEV 63

>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1 Length = 58

 Score = 65.6 bits (161), Expect = 3e-14
 Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 3/56 (5%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLA--GELRGQTGWFPESYVE 224
             + +Y +V ++ DE++  PGD I + V ++   GW     +  G+TG  P +Y+ 
Sbjct: 3   ENKVLYAYVQKDDDEITITPGDKISL-VARDTGSGWTKINNDTTGETGLVPTTYIR 57

>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane, nuclear protein, phosphorylation, polymorphism, transport, structural genomics; NMR {Homo sapiens} Length = 70

 Score = 65.7 bits (161), Expect = 3e-14
 Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 4/64 (6%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRG--QTGWFPESYVE 224
           S      A + F      E+SF+ G+ I   + +  +  W  G + G  + G FP +YV+
Sbjct: 5   SSGGEAIAKFNFNGDTQVEMSFRKGERIT--LLRQVDENWYEGRIPGTSRQGIFPITYVD 62

Query: 225 PCDE 228
               
Sbjct: 63  VISG 66

>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane, nuclear protein, phosphorylation, polymorphism, transport, structural genomics; NMR {Homo sapiens} Length = 70

 Score = 51.1 bits (123), Expect = 6e-09
 Identities = 9/46 (19%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 112 ANMMSDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTI 156
           ++  S    IA + ++     +++F + E I + ++ + +W+ G I
Sbjct: 2   SSGSSGGEAIAKFNFNGDTQVEMSFRKGERITLLRQVDENWYEGRI 47

>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane, nuclear protein, phosphorylation, polymorphism, transport, structural genomics; NMR {Homo sapiens} Length = 70

 Score = 36.4 bits (85), Expect = 9e-04
 Identities = 9/38 (23%), Positives = 17/38 (44%), Gaps = 2/38 (5%)

Query: 283 GTVVPVKQNAEPGWLAGELRG--QTGWFPESYVEPCDE 318
           G  + + +  +  W  G + G  + G FP +YV+    
Sbjct: 29  GERITLLRQVDENWYEGRIPGTSRQGIFPITYVDVISG 66

>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens} Length = 486

 Score = 72.1 bits (175), Expect = 4e-14
 Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 2/58 (3%)

Query: 169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL-RGQTGWFPESYVEP 225
             R RA+Y++  +  DELSF+ GD +   ++   E GW  G L  GQ G +P +YVE 
Sbjct: 428 EVRVRALYDYEGQEHDELSFKAGDELTK-MEDEDEQGWCKGRLDNGQVGLYPANYVEA 484

>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens} Length = 486

 Score = 42.8 bits (99), Expect = 1e-04
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)

Query: 288 VKQNAEPGWLAGEL-RGQTGWFPESYVEP 315
           ++   E GW  G L  GQ G +P +YVE 
Sbjct: 456 MEDEDEQGWCKGRLDNGQVGLYPANYVEA 484

>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae} Length = 71

 Score = 65.4 bits (160), Expect = 5e-14
 Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 3/61 (4%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPCD 227
           +R    Y+F++ + DEL+ + GD + + +       W   +L   G++G  P  ++EP  
Sbjct: 7   KRGIVQYDFMAESQDELTIKSGDKVYI-LDDKKSKDWWMCQLVDSGKSGLVPAQFIEPVR 65

Query: 228 E 228
           +
Sbjct: 66  D 66

>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal transduction, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} Length = 91

 Score = 66.0 bits (161), Expect = 5e-14
 Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 1/77 (1%)

Query: 164 RGVSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE-LRGQTGWFPESY 222
           +G       + +Y F S   +EL+F+ G+ + V  K   +P W   +  RGQ G  P++Y
Sbjct: 12  QGSRVLHVVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNY 71

Query: 223 VEPCDETGEVVPGTELP 239
           V    +   + P    P
Sbjct: 72  VVVLSDGPALHPAHSGP 88

>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal transduction, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} Length = 91

 Score = 45.5 bits (108), Expect = 1e-06
 Identities = 10/40 (25%), Positives = 17/40 (42%), Gaps = 3/40 (7%)

Query: 118 KYYIAAYPYDSTEPGDLTFNQDEVIYVTKK---ENDWWTG 154
                 YP+ S    +L F + E + V +K   + +WW  
Sbjct: 18  HVVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKC 57

>2csq_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 97

 Score = 66.1 bits (161), Expect = 5e-14
 Identities = 17/78 (21%), Positives = 28/78 (35%), Gaps = 9/78 (11%)

Query: 170 RRYRAIYEFVSRNG--------DELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPES 221
           R + A++++             +EL F+ G II V        G+  GE   + G  P +
Sbjct: 18  RIFVALFDYDPLTMSPNPDAAEEELPFKEGQIIKV-YGDKDADGFYRGETCARLGLIPCN 76

Query: 222 YVEPCDETGEVVPGTELP 239
            V       E +     P
Sbjct: 77  MVSEIQADDEEMMDQSGP 94

>2csq_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 97

 Score = 42.2 bits (99), Expect = 2e-05
 Identities = 8/37 (21%), Positives = 12/37 (32%)

Query: 293 EPGWLAGELRGQTGWFPESYVEPCDETGEVVPGTELP 329
             G+  GE   + G  P + V       E +     P
Sbjct: 58  ADGFYRGETCARLGLIPCNMVSEIQADDEEMMDQSGP 94

>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} PDB: 3h0i_A 3h0f_A* Length = 73

 Score = 65.4 bits (160), Expect = 6e-14
 Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 4/70 (5%)

Query: 160 TARFRGVSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE--LRGQTGW 217
           T R RG +    + A+Y++ +   D+LSF  G+     +  ++E  W        G+TG+
Sbjct: 6   TLRTRGGTGVTLFVALYDYEAITEDDLSFHKGEKFQ--ILNSSEGDWWEARSLTTGETGY 63

Query: 218 FPESYVEPCD 227
            P +YV P D
Sbjct: 64  IPSNYVAPVD 73

>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} PDB: 3h0i_A 3h0f_A* Length = 73

 Score = 49.2 bits (118), Expect = 3e-08
 Identities = 10/39 (25%), Positives = 18/39 (46%), Gaps = 1/39 (2%)

Query: 118 KYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGT 155
             ++A Y Y++    DL+F++ E   +      DWW   
Sbjct: 16  TLFVALYDYEAITEDDLSFHKGEKFQILNSSEGDWWEAR 54

>2yup_A Vinexin; sorbin and SH3 domain-containing protein 3, SH3-containing adapter molecule 1, SCAM-1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 90

 Score = 65.5 bits (160), Expect = 6e-14
 Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 4/76 (5%)

Query: 166 VSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL--RGQTGWFPESYV 223
           V EY    A Y F      ELSF+ G+ I + +++     W  G +   G+ G FP SYV
Sbjct: 14  VLEYGEAVAQYTFKGDLEVELSFRKGEHICL-IRKV-NENWYEGRITGTGRQGIFPASYV 71

Query: 224 EPCDETGEVVPGTELP 239
           +   E    +     P
Sbjct: 72  QVSREPRLRLCDDSGP 87

>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MLY; 2.20A {Homo sapiens} PDB: 2frw_A 2js0_A Length = 58

 Score = 64.5 bits (157), Expect = 6e-14
 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 2/54 (3%)

Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
               + +V+   DELS   G  + V   +    GW  G   GQ GWFP +YV  
Sbjct: 4   AFVXFAYVAEREDELSLVXGSRVTV--MEXCSDGWWRGSYNGQIGWFPSNYVLE 55

>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MLY; 2.20A {Homo sapiens} PDB: 2frw_A 2js0_A Length = 58

 Score = 43.3 bits (102), Expect = 2e-06
 Identities = 8/45 (17%), Positives = 17/45 (37%), Gaps = 1/45 (2%)

Query: 120 YIAAYPYDSTEPGDLTFNQDEVIYVTKKEND-WWTGTIGDRTARF 163
               + Y +    +L+      + V +  +D WW G+   +   F
Sbjct: 4   AFVXFAYVAEREDELSLVXGSRVTVMEXCSDGWWRGSYNGQIGWF 48

>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MLY; 2.20A {Homo sapiens} PDB: 2frw_A 2js0_A Length = 58

 Score = 41.3 bits (97), Expect = 1e-05
 Identities = 14/33 (42%), Positives = 17/33 (51%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEP 315
           G+ V V +    GW  G   GQ GWFP +YV  
Sbjct: 23  GSRVTVMEXCSDGWWRGSYNGQIGWFPSNYVLE 55

>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A Length = 58

 Score = 64.6 bits (158), Expect = 6e-14
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 5/58 (8%)

Query: 171 RYRAIYEFV-SRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR--GQTGWFPESYVEP 225
            + A Y+F  S +  EL  + GD+I +   +    GW  G+L    + GW P +Y++P
Sbjct: 2   MFEAAYDFPGSGSPSELPLKKGDVIYI--TREEPSGWSLGKLLDGSKEGWVPTAYMKP 57

>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A Length = 58

 Score = 45.3 bits (108), Expect = 4e-07
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 120 YIAAYPYD-STEPGDLTFNQDEVIYVTKKEND-WWTGTIGDRTAR 162
           + AAY +  S  P +L   + +VIY+T++E   W  G + D +  
Sbjct: 3   FEAAYDFPGSGSPSELPLKKGDVIYITREEPSGWSLGKLLDGSKE 47

>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A Length = 58

 Score = 40.7 bits (96), Expect = 2e-05
 Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 2/35 (5%)

Query: 283 GTVVPVKQNAEPGWLAGELR--GQTGWFPESYVEP 315
           G V+ + +    GW  G+L    + GW P +Y++P
Sbjct: 23  GDVIYITREEPSGWSLGKLLDGSKEGWVPTAYMKP 57

>2enm_A Sorting nexin-9; SH3-like barrel, protein transport, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 77

 Score = 65.0 bits (159), Expect = 7e-14
 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 3/63 (4%)

Query: 170 RRYRAIYEFV-SRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL-RGQTGWFPESYVEPCD 227
            + R +Y+F      +EL+   G+II V    N   GWL G+  +G+ G  P  YVE   
Sbjct: 10  TKARVMYDFAAEPGNNELTVTEGEIITV-TNPNVGGGWLEGKNNKGEQGLVPTDYVEILP 68

Query: 228 ETG 230
             G
Sbjct: 69  NDG 71

>2enm_A Sorting nexin-9; SH3-like barrel, protein transport, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 77

 Score = 38.5 bits (90), Expect = 2e-04
 Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 1/34 (2%)

Query: 288 VKQNAEPGWLAGEL-RGQTGWFPESYVEPCDETG 320
              N   GWL G+  +G+ G  P  YVE     G
Sbjct: 38  TNPNVGGGWLEGKNNKGEQGLVPTDYVEILPNDG 71

>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 65.1 bits (159), Expect = 8e-14
 Identities = 13/61 (21%), Positives = 29/61 (47%), Gaps = 2/61 (3%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE-LRGQTGWFPESYVEPCDET 229
             + +Y + +   DEL+ +  +++ V ++      W+      GQ G+ PE Y++    +
Sbjct: 15  TCKVVYSYKASQPDELTIEEHEVLEV-IEDGDMEDWVKARNKVGQVGYVPEKYLQFPTSS 73

Query: 230 G 230
           G
Sbjct: 74  G 74

>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A Length = 217

 Score = 68.6 bits (167), Expect = 9e-14
 Identities = 40/233 (17%), Positives = 70/233 (30%), Gaps = 54/233 (23%)

Query: 120 YIAAYPYDSTEPGDLTFNQDEVIYVTKKEND--WWTGTIGDRTARF-------------- 163
            IA Y + +T   +L+F + +++ V  +E D  W+   +  +                  
Sbjct: 3   AIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEMKPHPWFF 62

Query: 164 ----RGVSEYRRYRA-------IYEFVSRNGD-ELSFQPGD------IIMVPVKQNAEPG 205
               R  +E    +        I E  S  GD  LS + G+      ++     +     
Sbjct: 63  GKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWV 122

Query: 206 WLAGELRGQTGWFPESYVEPCDETGEVVPGTELPGDKHHLELIAEVPENISDSGGSGIAV 265
                L     +   + V    +              +   L    P+   + G      
Sbjct: 123 VKFNSLNELVDYHRSTSVSRNQQIFLRDIEQVPQQPTYVQALFDFDPQEDGELG------ 176

Query: 266 EEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE 318
                            G  + V  N++P W  G   GQTG FP +YV P + 
Sbjct: 177 --------------FRRGDFIHVMDNSDPNWWKGACHGQTGMFPRNYVTPVNR 215

>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A Length = 217

 Score = 67.4 bits (164), Expect = 2e-13
 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET 229
              A Y+F +   DELSF+ GDI+ V + +  +  W   EL G+ G+ P++Y+E     
Sbjct: 2   EAIAKYDFKATADDELSFKRGDILKV-LNEECDQNWYKAELNGKDGFIPKNYIEMKPHP 59

>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A Length = 60

 Score = 64.1 bits (157), Expect = 9e-14
 Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 3/58 (5%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL--RGQTGWFPESYVEP 225
            R    Y+F++ + DEL+ + GD + + +       W   +L   G++G  P  ++EP
Sbjct: 3   ERGIVQYDFMAESQDELTIKSGDKVYI-LDDKKSKDWWMCQLVDSGKSGLVPAQFIEP 59

>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A Length = 67

 Score = 64.2 bits (157), Expect = 1e-13
 Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 4/60 (6%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRG--QTGWFPESYVEPCDE 228
              A + F      E+SF+ G+ I   + +  +  W  G + G  + G FP +YV+    
Sbjct: 8   EAIAKFNFNGDTQVEMSFRKGERIT--LLRQVDENWYEGRIPGTSRQGIFPITYVDVIKR 65

>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A Length = 67

 Score = 50.3 bits (121), Expect = 1e-08
 Identities = 8/39 (20%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 119 YYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTI 156
             IA + ++     +++F + E I + ++ + +W+ G I
Sbjct: 8   EAIAKFNFNGDTQVEMSFRKGERITLLRQVDENWYEGRI 46

>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A Length = 67

 Score = 37.2 bits (87), Expect = 4e-04
 Identities = 9/38 (23%), Positives = 17/38 (44%), Gaps = 2/38 (5%)

Query: 283 GTVVPVKQNAEPGWLAGELRG--QTGWFPESYVEPCDE 318
           G  + + +  +  W  G + G  + G FP +YV+    
Sbjct: 28  GERITLLRQVDENWYEGRIPGTSRQGIFPITYVDVIKR 65

>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A Length = 58

 Score = 63.8 bits (156), Expect = 1e-13
 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 4/57 (7%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR--GQTGWFPESYVEPCD 227
            A Y++ +   +EL+F   D I+  ++   +  W  GEL   G  G FP +YV   +
Sbjct: 4   TAEYDYDAAEDNELTFVENDKIIN-IEFV-DDDWWLGELEKDGSKGLFPSNYVSLGN 58

>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A Length = 58

 Score = 48.7 bits (117), Expect = 3e-08
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 119 YYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTIG 157
           +  A Y YD+ E  +LTF +++ I   +  + DWW G + 
Sbjct: 2   WATAEYDYDAAEDNELTFVENDKIINIEFVDDDWWLGELE 41

>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A Length = 58

 Score = 37.2 bits (87), Expect = 3e-04
 Identities = 10/37 (27%), Positives = 15/37 (40%), Gaps = 2/37 (5%)

Query: 283 GTVVPVKQNAEPGWLAGELR--GQTGWFPESYVEPCD 317
              +   +  +  W  GEL   G  G FP +YV   +
Sbjct: 22  NDKIINIEFVDDDWWLGELEKDGSKGLFPSNYVSLGN 58

>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel, beta sheet, zinc finger, metal binding protein; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A Length = 71

 Score = 63.8 bits (156), Expect = 2e-13
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE-LRGQTGWFPESYVEPCDE 228
              + +Y F S   +EL+F+ G+ + V  K   +P W   +  RGQ G  P++YV    +
Sbjct: 7   HVVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVVLSD 66

Query: 229 T 229
            
Sbjct: 67  G 67

>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked agammaglobulinemia, XLA, BTK, SH3 domain, transferase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A Length = 67

 Score = 63.0 bits (154), Expect = 3e-13
 Identities = 15/64 (23%), Positives = 33/64 (51%), Gaps = 3/64 (4%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR-GQTGWFPESYVEP 225
           SE ++  A+Y+++  N ++L  + GD     + + +   W     + GQ G+ P +YV  
Sbjct: 6   SELKKVVALYDYMPMNANDLQLRKGDEYF--ILEESNLPWWRARDKNGQEGYIPSNYVTE 63

Query: 226 CDET 229
            +++
Sbjct: 64  AEDS 67

>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked agammaglobulinemia, XLA, BTK, SH3 domain, transferase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A Length = 67

 Score = 48.4 bits (116), Expect = 4e-08
 Identities = 9/38 (23%), Positives = 16/38 (42%), Gaps = 1/38 (2%)

Query: 118 KYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTG 154
           K  +A Y Y      DL   + +  ++ ++ N  WW  
Sbjct: 9   KKVVALYDYMPMNANDLQLRKGDEYFILEESNLPWWRA 46

>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C* 4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 1fyn_A 1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C* 1qwe_A 1qwf_A 1prl_C ... Length = 84

 Score = 63.2 bits (154), Expect = 4e-13
 Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 5/81 (6%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE--LRGQTGWFPESYVE 224
           S    + A+Y++ +    +LSF  G+     + +     W        G+TG+ P +YV 
Sbjct: 4   SGVTLFVALYDYNATRWTDLSFHKGEKFQ--ILEFGPGDWWEARSLTTGETGYIPSNYVA 61

Query: 225 PCDET-GEVVPGTELPGDKHH 244
           P D   GE    +E     HH
Sbjct: 62  PVDSIQGEQKLISEEDLHHHH 82

>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C* 4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 1fyn_A 1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C* 1qwe_A 1qwf_A 1prl_C ... Length = 84

 Score = 49.3 bits (118), Expect = 3e-08
 Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 116 SDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGT 155
               ++A Y Y++T   DL+F++ E   + +    DWW   
Sbjct: 5   GVTLFVALYDYNATRWTDLSFHKGEKFQILEFGPGDWWEAR 45

>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A Length = 68

 Score = 62.7 bits (153), Expect = 4e-13
 Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 7/59 (11%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRG-----QTGWFPESYVE 224
           +  A + + S   D+L+F+    I+V      +  W  GE +        G FP+S+V 
Sbjct: 9   KVVAQFPYKSDYEDDLNFEKDQEIIV-TSVE-DAEWYFGEYQDSNGDVIEGIFPKSFVA 65

>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A Length = 68

 Score = 55.0 bits (133), Expect = 2e-10
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)

Query: 121 IAAYPYDSTEPGDLTFNQDEVIYVTKKEND-WWTGTIGDRTARFR 164
           +A +PY S    DL F +D+ I VT  E+  W+ G   D      
Sbjct: 11  VAQFPYKSDYEDDLNFEKDQEIIVTSVEDAEWYFGEYQDSNGDVI 55

>2rqv_A BUD emergence protein 1; BEM1P, SH3, CDC42P, cytoplasm, cytoskeleton, SH3 domain, SIG protein; NMR {Saccharomyces cerevisiae} PDB: 2rqw_A Length = 108

 Score = 63.7 bits (155), Expect = 6e-13
 Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 5/72 (6%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL---RGQTGWFPESYVEPCDET 229
             +Y+F +   DEL+   G+ + +    N    W   +     G  G  P  +V   D  
Sbjct: 9   IVLYDFKAEKADELTTYVGENLFICAHHN--CEWFIAKPIGRLGGPGLVPVGFVSIIDIA 66

Query: 230 GEVVPGTELPGD 241
                G ++  D
Sbjct: 67  TGYATGNDVIED 78

>2rqv_A BUD emergence protein 1; BEM1P, SH3, CDC42P, cytoplasm, cytoskeleton, SH3 domain, SIG protein; NMR {Saccharomyces cerevisiae} PDB: 2rqw_A Length = 108

 Score = 37.8 bits (88), Expect = 7e-04
 Identities = 9/52 (17%), Positives = 16/52 (30%), Gaps = 3/52 (5%)

Query: 283 GTVVPVKQNAEPGWLAGEL---RGQTGWFPESYVEPCDETGEVVPGTELPGD 331
           G  + +  +    W   +     G  G  P  +V   D       G ++  D
Sbjct: 27  GENLFICAHHNCEWFIAKPIGRLGGPGLVPVGFVSIIDIATGYATGNDVIED 78

>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A Length = 79

 Score = 62.4 bits (152), Expect = 7e-13
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 4/65 (6%)

Query: 166 VSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE--LRGQTGWFPESYV 223
           V     + A+Y++ +R  D+LSF  G+     +  ++E  W        G+TG+ P  Y+
Sbjct: 2   VQISTLFEALYDYEARTEDDLSFHKGEKFQ--ILNSSEGDWWEARSLTTGETGYIPSIYL 59

Query: 224 EPCDE 228
            P D 
Sbjct: 60  APVDR 64

>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A Length = 79

 Score = 47.7 bits (114), Expect = 1e-07
 Identities = 10/40 (25%), Positives = 17/40 (42%), Gaps = 1/40 (2%)

Query: 117 DKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGT 155
              + A Y Y++    DL+F++ E   +      DWW   
Sbjct: 5   STLFEALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEAR 44

>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein 10, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 70

 Score = 61.9 bits (151), Expect = 7e-13
 Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 2/63 (3%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL-RGQTGWFPESYVEP 225
           S      AIY F   +   +S   G+ + + ++++   GW       G  G+ P SY+  
Sbjct: 5   SSGGHCVAIYHFEGSSEGTISMAEGEDLSL-MEEDKGDGWTRVRRKEGGEGYVPTSYLRV 63

Query: 226 CDE 228
              
Sbjct: 64  TSG 66

>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1 Length = 71

 Score = 61.9 bits (151), Expect = 8e-13
 Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 2/58 (3%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR-GQTGWFPESYVEPCD 227
              A Y F      +L F  GD++ + V    +P W   + + G+ G  P +YV+  +
Sbjct: 13  ECIAKYNFHGTAEQDLPFCKGDVLTI-VAVTKDPNWYKAKNKVGREGIIPANYVQKRE 69

>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1 Length = 71

 Score = 46.9 bits (112), Expect = 2e-07
 Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 2/37 (5%)

Query: 120 YIAAYPYDSTEPGDLTFNQDEVIYVTKKEND--WWTG 154
            IA Y +  T   DL F + +V+ +     D  W+  
Sbjct: 14  CIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKA 50

>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin SH3 domain, SPC-S19P20S circular permutant, S protein; NMR {Synthetic} Length = 73

 Score = 62.0 bits (151), Expect = 9e-13
 Identities = 12/55 (21%), Positives = 25/55 (45%), Gaps = 3/55 (5%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD 227
             +  + +    E++ + GDI+ +    N    W   E+  + G+ P +YV+  D
Sbjct: 4   PPLPPYSAGG-REVTMKKGDILTLLNSTN--KDWWKVEVNDRQGFVPAAYVKKLD 55

>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin SH3 domain, SPC-S19P20S circular permutant, S protein; NMR {Synthetic} Length = 73

 Score = 49.3 bits (118), Expect = 2e-08
 Identities = 9/44 (20%), Positives = 18/44 (40%), Gaps = 2/44 (4%)

Query: 121 IAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTIGDRTARF 163
               PY +    ++T  + +++ +    N DWW   + DR    
Sbjct: 4   PPLPPYSA-GGREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFV 46

>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin SH3 domain, SPC-S19P20S circular permutant, S protein; NMR {Synthetic} Length = 73

 Score = 41.6 bits (98), Expect = 1e-05
 Identities = 8/35 (22%), Positives = 17/35 (48%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD 317
           G ++ +  +    W   E+  + G+ P +YV+  D
Sbjct: 21  GDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLD 55

>2vkn_A Protein SSU81; membrane, SH3 domain, transmembrane, membrane; 2.05A {Saccharomyces cerevisiae} Length = 70

 Score = 61.6 bits (150), Expect = 1e-12
 Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 6/65 (9%)

Query: 171 RYRAIYEFVSRNGD--ELSFQPGDIIMVPVKQNAEPG-WLAGELRGQTGWFPESYVEPCD 227
           + +A+Y + + + D  E+SF+  +I+ V    + E   W A    G+TG  P +YV+  D
Sbjct: 7   KAKALYPYDADDDDAYEISFEQNEILQV---SDIEGRWWKARRANGETGIIPSNYVQLID 63

Query: 228 ETGEV 232
              E+
Sbjct: 64  GPEEM 68

>2vkn_A Protein SSU81; membrane, SH3 domain, transmembrane, membrane; 2.05A {Saccharomyces cerevisiae} Length = 70

 Score = 46.6 bits (111), Expect = 2e-07
 Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 2/40 (5%)

Query: 121 IAAYPYDS--TEPGDLTFNQDEVIYVTKKENDWWTGTIGD 158
            A YPYD+   +  +++F Q+E++ V+  E  WW     +
Sbjct: 9   KALYPYDADDDDAYEISFEQNEILQVSDIEGRWWKARRAN 48

>2vkn_A Protein SSU81; membrane, SH3 domain, transmembrane, membrane; 2.05A {Saccharomyces cerevisiae} Length = 70

 Score = 38.9 bits (91), Expect = 1e-04
 Identities = 11/40 (27%), Positives = 17/40 (42%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEV 322
             ++ V       W A    G+TG  P +YV+  D   E+
Sbjct: 29  NEILQVSDIEGRWWKARRANGETGIIPSNYVQLIDGPEEM 68

>1jqq_A PEX13P, peroxisomal membrane protein PAS20, PAS20P, roxin-13; compact beta-barrel of five anti-parrallel beta-strands; 2.65A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1n5z_A Length = 92

 Score = 62.1 bits (151), Expect = 1e-12
 Identities = 16/73 (21%), Positives = 32/73 (43%), Gaps = 5/73 (6%)

Query: 167 SEYRRYRAIYEFVSRN-GDELSFQPGDIIMV---PVKQNAEPGWLAGELR-GQTGWFPES 221
           S+    RA+Y+FV  N   E++ + GD++ +         +  W     + G  G+ P +
Sbjct: 12  SKLEFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYN 71

Query: 222 YVEPCDETGEVVP 234
           Y+E      ++  
Sbjct: 72  YIEIIKRRKKIEH 84

>1jqq_A PEX13P, peroxisomal membrane protein PAS20, PAS20P, roxin-13; compact beta-barrel of five anti-parrallel beta-strands; 2.65A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1n5z_A Length = 92

 Score = 39.0 bits (91), Expect = 2e-04
 Identities = 7/48 (14%), Positives = 20/48 (41%), Gaps = 7/48 (14%)

Query: 118 KYYIAAYPYDSTEP-GDLTFNQDEVIYVTKK------ENDWWTGTIGD 158
           ++  A Y +    P  ++   + +++ +  K      ++DWW     +
Sbjct: 15  EFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKN 62

>2kgt_A Tyrosine-protein kinase 6; SH3 domain, SRC kinase, PTK6, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; NMR {Homo sapiens} Length = 72

 Score = 60.1 bits (146), Expect = 3e-12
 Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 7/63 (11%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL-----RGQTGWFPESYVE 224
            +Y  +++F SR  +ELSF+ GD+    V +  E  W A  L         G+ P +Y+ 
Sbjct: 11  PKYVGLWDFKSRTDEELSFRAGDVFH--VARKEEQWWWATLLDEAGGAVAQGYVPHNYLA 68

Query: 225 PCD 227
             +
Sbjct: 69  ERE 71

>2kgt_A Tyrosine-protein kinase 6; SH3 domain, SRC kinase, PTK6, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; NMR {Homo sapiens} Length = 72

 Score = 49.7 bits (119), Expect = 2e-08
 Identities = 10/34 (29%), Positives = 18/34 (52%)

Query: 119 YYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWW 152
            Y+  + + S    +L+F   +V +V +KE  WW
Sbjct: 12  KYVGLWDFKSRTDEELSFRAGDVFHVARKEEQWW 45

>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A Length = 68

 Score = 60.0 bits (146), Expect = 3e-12
 Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 2/61 (3%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC 226
              +     Y+F +RN  ELS +  D++   V  ++   W   +  GQ G+ P + + P 
Sbjct: 6   GALKWVLCNYDFQARNSSELSVKQRDVLE--VLDDSRKWWKVRDPAGQEGYVPYNILTPY 63

Query: 227 D 227
            
Sbjct: 64  P 64

>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A Length = 68

 Score = 48.1 bits (115), Expect = 5e-08
 Identities = 8/37 (21%), Positives = 16/37 (43%)

Query: 118 KYYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTG 154
           K+ +  Y + +    +L+  Q +V+ V      WW  
Sbjct: 9   KWVLCNYDFQARNSSELSVKQRDVLEVLDDSRKWWKV 45

>2v1r_A Peroxisomal membrane protein PAS20; protein transport, translocation, transmembrane, peptide COM structural genomics, peroxisome; 2.1A {Saccharomyces cerevisiae} SCOP: b.34.2.1 Length = 80

 Score = 60.1 bits (146), Expect = 4e-12
 Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 5/68 (7%)

Query: 167 SEYRRYRAIYEFVSRNGD-ELSFQPGDIIMV---PVKQNAEPGWLAGELR-GQTGWFPES 221
           S+    RA+Y+FV  N + E++ + GD++ +         +  W     + G  G+ P +
Sbjct: 12  SKLEFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYN 71

Query: 222 YVEPCDET 229
           Y+E     
Sbjct: 72  YIEIIKRR 79

>2v1r_A Peroxisomal membrane protein PAS20; protein transport, translocation, transmembrane, peptide COM structural genomics, peroxisome; 2.1A {Saccharomyces cerevisiae} SCOP: b.34.2.1 Length = 80

 Score = 38.2 bits (89), Expect = 3e-04
 Identities = 7/48 (14%), Positives = 20/48 (41%), Gaps = 7/48 (14%)

Query: 118 KYYIAAYPYDSTEPG-DLTFNQDEVIYVTKK------ENDWWTGTIGD 158
           ++  A Y +    P  ++   + +++ +  K      ++DWW     +
Sbjct: 15  EFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKN 62

>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3, signaling protein; NMR {Gallus gallus} Length = 77

 Score = 59.9 bits (145), Expect = 5e-12
 Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 7/77 (9%)

Query: 181 RNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD-----ETGEVVPG 235
               E++ + GDI+ +    +    W   E+  + G+ P +YV+  D     E    +  
Sbjct: 3   MGPREVTMKKGDILTL--LNSTNKDWWKVEVNDRQGFVPAAYVKKLDSGTGKELVLALYD 60

Query: 236 TELPGDKHHLELIAEVP 252
            +  GD          P
Sbjct: 61  YQESGDNAPSYSPPPPP 77

>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3, signaling protein; NMR {Gallus gallus} Length = 77

 Score = 43.3 bits (102), Expect = 4e-06
 Identities = 8/36 (22%), Positives = 17/36 (47%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE 318
           G ++ +  +    W   E+  + G+ P +YV+  D 
Sbjct: 13  GDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLDS 48

>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3, signaling protein; NMR {Gallus gallus} Length = 77

 Score = 40.2 bits (94), Expect = 5e-05
 Identities = 8/35 (22%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 130 EPGDLTFNQDEVIYVTKKEN-DWWTGTIGDRTARF 163
            P ++T  + +++ +    N DWW   + DR    
Sbjct: 4   GPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFV 38

>2ke9_A Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosphoprotein, protein binding; NMR {Homo sapiens} Length = 83

 Score = 60.3 bits (146), Expect = 5e-12
 Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 9/69 (13%)

Query: 167 SEYRRYRAIYEFV-SRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRG------QTGWFP 219
               + RA+ +F    +   L+ + GD+I V ++Q+   G   G +        + G+FP
Sbjct: 16  RGSLKVRALKDFWNLHDPTALNVRAGDVITV-LEQH-PDGRWKGHIHESQRGTDRIGYFP 73

Query: 220 ESYVEPCDE 228
              VE   +
Sbjct: 74  PGIVEVVSK 82

>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched library, clone:9530076O17...; SH3_1 domain; NMR {Mus musculus} Length = 109

 Score = 60.9 bits (148), Expect = 5e-12
 Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 2/59 (3%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR-GQTGWFPESYVEPCD 227
             + A+Y++ +R  ++LSF+ G+   + +       W A  +  G++G+ P +YV P D
Sbjct: 28  TIFVALYDYEARTTEDLSFKKGERFQI-INNTEGDWWEARSIATGKSGYIPSNYVVPAD 85

>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1 Length = 67

 Score = 59.2 bits (144), Expect = 6e-12
 Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 1/60 (1%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET 229
               A+Y+F +    +L  + G   ++ +++N    W A +  G  G+ P +YV      
Sbjct: 3   EIVVAMYDFQATEAHDLRLERGQEYII-LEKNDLHWWRARDKYGSEGYIPSNYVTGKKSN 61

>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1 Length = 67

 Score = 48.0 bits (115), Expect = 6e-08
 Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 1/38 (2%)

Query: 118 KYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTG 154
           +  +A Y + +TE  DL   + +   + +K +  WW  
Sbjct: 3   EIVVAMYDFQATEAHDLRLERGQEYIILEKNDLHWWRA 40

>1tuc_A Alpha-spectrin; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton; 2.02A {Gallus gallus} SCOP: b.34.2.1 Length = 63

 Score = 58.5 bits (142), Expect = 1e-11
 Identities = 12/46 (26%), Positives = 22/46 (47%), Gaps = 2/46 (4%)

Query: 184 DELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET 229
            E++ + GDI+ +    N    W   E+  + G+ P +YV+  D  
Sbjct: 4   REVTMKKGDILTLLNSTN--KDWWKVEVNDRQGFVPAAYVKKLDSG 47

>1tuc_A Alpha-spectrin; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton; 2.02A {Gallus gallus} SCOP: b.34.2.1 Length = 63

 Score = 43.9 bits (104), Expect = 2e-06
 Identities = 8/35 (22%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 130 EPGDLTFNQDEVIYVTKKEN-DWWTGTIGDRTARF 163
            P ++T  + +++ +    N DWW   + DR    
Sbjct: 2   GPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFV 36

>1tuc_A Alpha-spectrin; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton; 2.02A {Gallus gallus} SCOP: b.34.2.1 Length = 63

 Score = 42.7 bits (101), Expect = 5e-06
 Identities = 8/37 (21%), Positives = 17/37 (45%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET 319
           G ++ +  +    W   E+  + G+ P +YV+  D  
Sbjct: 11  GDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLDSG 47

>1k1z_A VAV; SH3, proto-oncogene, signaling protein; NMR {Mus musculus} SCOP: b.34.2.1 Length = 78

 Score = 58.9 bits (142), Expect = 1e-11
 Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 3/58 (5%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL--RGQTGWFPESYVEP 225
           + Y  I       G  L   PGDI+ +  K  AE  W  G      + GWFP + V P
Sbjct: 19  QEYYGIPPPPGAFGGFLRLNPGDIVEL-TKAEAEHNWWEGRNTATNEVGWFPCNRVHP 75

>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 77

 Score = 58.6 bits (142), Expect = 1e-11
 Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 11/68 (16%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGW---------LAGELRGQTGW 217
           S  + + A++++ +R  ++LSF+ GD +   V   +  GW           G  +   G+
Sbjct: 5   SSGQYFVALFDYQARTAEDLSFRAGDKLQ--VLDTSHEGWWLARHLEKKGTGLGQQLQGY 62

Query: 218 FPESYVEP 225
            P +YV  
Sbjct: 63  IPSNYVAE 70

>2kym_A BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI, STE20P PRR, CDC42P-interacting, S signaling protein; NMR {Lodderomyces elongisporus} Length = 120

 Score = 60.0 bits (145), Expect = 1e-11
 Identities = 24/124 (19%), Positives = 39/124 (31%), Gaps = 13/124 (10%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL---RGQTGWFPESYVEPCDET 229
             +YEF +   DEL   PG+ + +    +    W   +     G  G  P SYV   D  
Sbjct: 7   VTLYEFKAERDDELDVSPGENLSICAHYD--YEWFIAKPINRLGGPGLVPVSYVRIIDLM 64

Query: 230 GEVVPGTELPGDKHHLELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVK 289
                 +    D+       +V + I +       VE+            + +G      
Sbjct: 65  DPAKYASVDTYDRE------QVMKIIDEFKIPT--VEQWKDQTRRYKESSIQIGNGHGQS 116

Query: 290 QNAE 293
           Q  E
Sbjct: 117 QGLE 120

>1nm7_A Peroxisomal membrane protein PAS20; yeast, PEX5P, PEX14P, PEX13P, import machine, SH3 domain, protein transport; NMR {Saccharomyces cerevisiae} SCOP: b.34.2.1 Length = 69

 Score = 58.2 bits (141), Expect = 2e-11
 Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 5/58 (8%)

Query: 173 RAIYEFVSRNGD-ELSFQPGDIIMV---PVKQNAEPGWLAGELR-GQTGWFPESYVEP 225
           RA+Y+FV  N + E++ + GD++ +         +  W     + G  G+ P +Y+E 
Sbjct: 11  RALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEI 68

>1nm7_A Peroxisomal membrane protein PAS20; yeast, PEX5P, PEX14P, PEX13P, import machine, SH3 domain, protein transport; NMR {Saccharomyces cerevisiae} SCOP: b.34.2.1 Length = 69

 Score = 37.4 bits (87), Expect = 4e-04
 Identities = 7/48 (14%), Positives = 19/48 (39%), Gaps = 7/48 (14%)

Query: 118 KYYIAAYPYDSTEP-GDLTFNQDEVIYVTKK------ENDWWTGTIGD 158
            +  A Y +    P  ++   + +++ +  K      ++DWW     +
Sbjct: 8   HFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKN 55

>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase, tyrosine-protein kinase LYK, kinase EMT, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 85

 Score = 58.5 bits (142), Expect = 2e-11
 Identities = 16/79 (20%), Positives = 33/79 (41%), Gaps = 3/79 (3%)

Query: 153 TGTIGDRTARFRGVSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR 212
           +G+ G+   R     E     A+Y++ + +  EL+ +  +     +  ++E  W   + R
Sbjct: 3   SGSSGEDNRRPLWEPEETVVIALYDYQTNDPQELALRRNEEYC--LLDSSEIHWWRVQDR 60

Query: 213 -GQTGWFPESYVEPCDETG 230
            G  G+ P SY+       
Sbjct: 61  NGHEGYVPSSYLVEKSPNN 79

>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase, tyrosine-protein kinase LYK, kinase EMT, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 85

 Score = 45.1 bits (107), Expect = 1e-06
 Identities = 9/39 (23%), Positives = 16/39 (41%), Gaps = 1/39 (2%)

Query: 117 DKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTG 154
           +   IA Y Y + +P +L   ++E   +       WW  
Sbjct: 19  ETVVIALYDYQTNDPQELALRRNEEYCLLDSSEIHWWRV 57

>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A Length = 65

 Score = 57.7 bits (140), Expect = 2e-11
 Identities = 13/64 (20%), Positives = 30/64 (46%), Gaps = 10/64 (15%)

Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGW--------LAGELRGQTGWFPESYV 223
             A+Y++  ++  E++ + GDI+   +  +    W        + G+   + G+ P +YV
Sbjct: 4   VLALYDYQEKSPREVTMKKGDILT--LLNSTNKDWWKVEVKITVNGKTYERQGFVPAAYV 61

Query: 224 EPCD 227
           +  D
Sbjct: 62  KKLD 65

>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A Length = 62

 Score = 56.9 bits (138), Expect = 4e-11
 Identities = 11/40 (27%), Positives = 21/40 (52%)

Query: 115 MSDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTG 154
           + D   IA + Y+ +  GDL F + E + + ++  +WW  
Sbjct: 4   LQDNLVIALHSYEPSHDGDLGFEKGEQLRILEQSGEWWKA 43

>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A Length = 62

 Score = 53.1 bits (128), Expect = 9e-10
 Identities = 10/60 (16%), Positives = 24/60 (40%), Gaps = 5/60 (8%)

Query: 168 EYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE--LRGQTGWFPESYVEP 225
           +     A++ +   +  +L F+ G+ + +         W   +    GQ G+ P ++V  
Sbjct: 5   QDNLVIALHSYEPSHDGDLGFEKGEQLRI---LEQSGEWWKAQSLTTGQEGFIPFNFVAK 61

>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain, signaling protein; NMR {Homo sapiens} Length = 72

 Score = 56.5 bits (137), Expect = 7e-11
 Identities = 12/61 (19%), Positives = 29/61 (47%), Gaps = 2/61 (3%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC 226
           +E     A +++V++   EL  +  + +   +  +++  W       +TG+ P +YVE  
Sbjct: 5   AEEVVVVAKFDYVAQQEQELDIKKNERLW--LLDDSKSWWRVRNSMNKTGFVPSNYVERK 62

Query: 227 D 227
           +
Sbjct: 63  N 63

>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain, signaling protein; NMR {Homo sapiens} Length = 72

 Score = 49.2 bits (118), Expect = 3e-08
 Identities = 7/43 (16%), Positives = 19/43 (44%)

Query: 112 ANMMSDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTG 154
           + M  +   +A + Y + +  +L   ++E +++      WW  
Sbjct: 2   STMAEEVVVVAKFDYVAQQEQELDIKKNERLWLLDDSKSWWRV 44

>2oi3_A Tyrosine-protein kinase HCK; human HCK, SH3, SRC-type tyrosine kinase, transferase; NMR {Homo sapiens} PDB: 2oj2_A 4hck_A 5hck_A Length = 86

 Score = 56.7 bits (137), Expect = 9e-11
 Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 3/62 (4%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR-GQTGWFPESYVEP 225
           SE     A+Y++ + + ++LSFQ GD ++V ++++ E  W A  L   + G+ P +YV  
Sbjct: 23  SEDIIVVALYDYEAIHHEDLSFQKGDQMVV-LEESGE-WWKARSLATRKEGYIPSNYVAR 80

Query: 226 CD 227
            D
Sbjct: 81  VD 82

>2oi3_A Tyrosine-protein kinase HCK; human HCK, SH3, SRC-type tyrosine kinase, transferase; NMR {Homo sapiens} PDB: 2oj2_A 4hck_A 5hck_A Length = 86

 Score = 55.9 bits (135), Expect = 1e-10
 Identities = 10/39 (25%), Positives = 20/39 (51%)

Query: 116 SDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTG 154
            D   +A Y Y++    DL+F + + + V ++  +WW  
Sbjct: 24  EDIIVVALYDYEAIHHEDLSFQKGDQMVVLEESGEWWKA 62

>3reb_B Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain binding, signaling, HCK SH3 domain, PR binding; 3.45A {Homo sapiens} Length = 90

 Score = 56.6 bits (137), Expect = 9e-11
 Identities = 13/40 (32%), Positives = 21/40 (52%)

Query: 115 MSDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTG 154
           M D   +A Y Y S  P DL+F + + + V ++  +WW  
Sbjct: 1   MEDIIVVALYDYVSWSPDDLSFQKGDQMVVLEESGEWWKA 40

>3reb_B Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain binding, signaling, HCK SH3 domain, PR binding; 3.45A {Homo sapiens} Length = 90

 Score = 53.6 bits (129), Expect = 1e-09
 Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 3/57 (5%)

Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR-GQTGWFPESYVEPCD 227
             A+Y++VS + D+LSFQ GD ++V ++++ E  W A  L   + G+ P +YV   D
Sbjct: 6   VVALYDYVSWSPDDLSFQKGDQMVV-LEESGE-WWKARSLATRKEGYIPSNYVARVD 60

>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2js2_A Length = 67

 Score = 55.7 bits (135), Expect = 1e-10
 Identities = 12/63 (19%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC 226
           +E     A +++ ++   EL  +  + +   +  +++  W       +TG+ P +YVE  
Sbjct: 2   TEEVIVIAKWDYTAQQDQELDIKKNERLW--LLDDSKTWWRVRNAANRTGYVPSNYVERK 59

Query: 227 DET 229
            E 
Sbjct: 60  LEH 62

>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2js2_A Length = 67

 Score = 53.0 bits (128), Expect = 1e-09
 Identities = 8/41 (19%), Positives = 18/41 (43%)

Query: 114 MMSDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTG 154
           M  +   IA + Y + +  +L   ++E +++      WW  
Sbjct: 1   MTEEVIVIAKWDYTAQQDQELDIKKNERLWLLDDSKTWWRV 41

>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 79

 Score = 56.3 bits (136), Expect = 1e-10
 Identities = 10/62 (16%), Positives = 21/62 (33%), Gaps = 3/62 (4%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR-GQTGWFPESYVEP 225
            +      + ++ S +     F+ G+ + V +       W A  L  G+  + P   V  
Sbjct: 15  LDSDFLAVLSDYPSPDISPPIFRRGEKLRV-ISDEGG-WWKAISLSTGRESYIPGICVAR 72

Query: 226 CD 227
             
Sbjct: 73  VS 74

>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 79

 Score = 52.8 bits (127), Expect = 2e-09
 Identities = 8/39 (20%), Positives = 12/39 (30%)

Query: 116 SDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTG 154
              +      Y S +     F + E + V   E  WW  
Sbjct: 16  DSDFLAVLSDYPSPDISPPIFRRGEKLRVISDEGGWWKA 54

>1awj_A ITK; transferase, regulatory intramolecular complex, kinase; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 2rn8_A 2rna_A 2k79_A 2k7a_A Length = 77

 Score = 56.2 bits (136), Expect = 1e-10
 Identities = 11/58 (18%), Positives = 25/58 (43%), Gaps = 1/58 (1%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
            E     A+Y++ + +  EL+ +  +   + +  +    W   +  G  G+ P SY+ 
Sbjct: 18  PEETLVIALYDYQTNDPQELALRCDEEYYL-LDSSEIHWWRVQDKNGHEGYAPSSYLV 74

>1awj_A ITK; transferase, regulatory intramolecular complex, kinase; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 2rn8_A 2rna_A 2k79_A 2k7a_A Length = 77

 Score = 46.2 bits (110), Expect = 4e-07
 Identities = 11/40 (27%), Positives = 16/40 (40%), Gaps = 1/40 (2%)

Query: 116 SDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTG 154
            +   IA Y Y + +P +L    DE  Y+       WW  
Sbjct: 19  EETLVIALYDYQTNDPQELALRCDEEYYLLDSSEIHWWRV 58

>2rqr_A CED-12 homolog, engulfment and cell motility protein 1, linker, D of cytokinesis protein 2; KIAA0209, KIAA0281, apoptosis, membrane, phagocytosis; NMR {Homo sapiens} Length = 119

 Score = 57.0 bits (137), Expect = 2e-10
 Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 6/69 (8%)

Query: 164 RGVSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL---RGQTGWFPE 220
               + R   AIY F      +LS Q GD++ +  +      W  G L   +   G FP+
Sbjct: 54  SSGDKERHGVAIYNFQGSGAPQLSLQIGDVVRI-QETC--GDWYRGYLIKHKMLQGIFPK 110

Query: 221 SYVEPCDET 229
           S++   + T
Sbjct: 111 SFIHIKEVT 119

>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 81

 Score = 55.5 bits (134), Expect = 2e-10
 Identities = 10/57 (17%), Positives = 20/57 (35%), Gaps = 3/57 (5%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE--LRGQTGWFPESYVEP 225
           +     E       EL+F+ GD++ + ++      W   +    GQ G      +  
Sbjct: 19  QCITKCEHTRPKPGELAFRKGDVVTI-LEACENKSWYRVKHHTSGQEGLLAAGALRE 74

>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 81

 Score = 43.9 bits (104), Expect = 3e-06
 Identities = 7/37 (18%), Positives = 17/37 (45%), Gaps = 2/37 (5%)

Query: 120 YIAAYPYDSTEPGDLTFNQDEVIYVTKKEND--WWTG 154
            I    +   +PG+L F + +V+ + +   +  W+  
Sbjct: 20  CITKCEHTRPKPGELAFRKGDVVTILEACENKSWYRV 56

>1gcq_C VAV proto-oncogene; SH3 domain, protein-protein complex, GRB2,VAV, signaling protein/signaling protein complex; 1.68A {Mus musculus} SCOP: b.34.2.1 PDB: 1gcp_A Length = 70

 Score = 55.4 bits (133), Expect = 2e-10
 Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 3/58 (5%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL--RGQTGWFPESYVEP 225
           + Y  I       G  L   PGDI+ +  K  AE  W  G      + GWFP + V P
Sbjct: 11  QEYYGIPPPPGAFGPFLRLNPGDIVEL-TKAEAEHNWWEGRNTATNEVGWFPCNRVHP 67

>1i07_A Epidermal growth factor receptor kinase substrate EPS8; hormone/growth factor; 1.80A {Mus musculus} SCOP: b.34.2.1 PDB: 1aoj_A 1i0c_A Length = 60

 Score = 54.6 bits (132), Expect = 3e-10
 Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 2/56 (3%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
           +  ++ Y+FV+RN  ELS    D++   +  +    W      G +G+ P + ++ 
Sbjct: 2   KYAKSKYDFVARNSSELSVMKDDVLE--ILDDRRQWWKVRNASGDSGFVPNNILDI 55

>1i07_A Epidermal growth factor receptor kinase substrate EPS8; hormone/growth factor; 1.80A {Mus musculus} SCOP: b.34.2.1 PDB: 1aoj_A 1i0c_A Length = 60

 Score = 45.3 bits (108), Expect = 5e-07
 Identities = 8/37 (21%), Positives = 17/37 (45%)

Query: 118 KYYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTG 154
           KY  + Y + +    +L+  +D+V+ +      WW  
Sbjct: 2   KYAKSKYDFVARNSSELSVMKDDVLEILDDRRQWWKV 38

>2jxb_A T-cell surface glycoprotein CD3 epsilon chain, cytoplasmic protein NCK2; T-cell receptor, SH3 domain, immunology, SH2 domain; NMR {Homo sapiens} Length = 86

 Score = 55.2 bits (133), Expect = 3e-10
 Identities = 11/58 (18%), Positives = 27/58 (46%), Gaps = 2/58 (3%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           +E     A +++ ++   EL  +  + +   +  +++  W       +TG+ P +YVE
Sbjct: 29  TEEVIVIAKWDYTAQQDQELDIKKNERLW--LLDDSKTWWRVRNAANRTGYVPSNYVE 84

>2jxb_A T-cell surface glycoprotein CD3 epsilon chain, cytoplasmic protein NCK2; T-cell receptor, SH3 domain, immunology, SH2 domain; NMR {Homo sapiens} Length = 86

 Score = 49.0 bits (117), Expect = 5e-08
 Identities = 7/39 (17%), Positives = 17/39 (43%)

Query: 116 SDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTG 154
            +   IA + Y + +  +L   ++E +++      WW  
Sbjct: 30  EEVIVIAKWDYTAQQDQELDIKKNERLWLLDDSKTWWRV 68

>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 75

 Score = 54.4 bits (131), Expect = 5e-10
 Identities = 14/62 (22%), Positives = 28/62 (45%), Gaps = 7/62 (11%)

Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGW----LAGELRGQTGWFPESYVEPCD 227
           Y +I ++     +   FQ G  + V +++N   GW    +   ++   GW P +Y+E  +
Sbjct: 13  YVSIADYEGDE-ETAGFQEGVSMEV-LERN-PNGWWYCQILDGVKPFKGWVPSNYLEKKN 69

Query: 228 ET 229
             
Sbjct: 70  SG 71

>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 75

 Score = 44.4 bits (105), Expect = 1e-06
 Identities = 12/47 (25%), Positives = 20/47 (42%), Gaps = 2/47 (4%)

Query: 120 YIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTARFRG 165
           Y++   Y+  E     F +   + V ++  N WW   I D    F+G
Sbjct: 13  YVSIADYEGDE-ETAGFQEGVSMEVLERNPNGWWYCQILDGVKPFKG 58

>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 75

 Score = 36.7 bits (85), Expect = 7e-04
 Identities = 9/41 (21%), Positives = 17/41 (41%), Gaps = 4/41 (9%)

Query: 283 GTVVPVKQNAEPGW----LAGELRGQTGWFPESYVEPCDET 319
           G  + V +    GW    +   ++   GW P +Y+E  +  
Sbjct: 31  GVSMEVLERNPNGWWYCQILDGVKPFKGWVPSNYLEKKNSG 71

>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D Length = 466

 Score = 58.0 bits (140), Expect = 1e-09
 Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 2/65 (3%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEV 232
            A+++ V+ +  EL F+ GD+I   V       W  G +    GWFP S+V       E 
Sbjct: 34  EALWDHVTMDDQELGFKAGDVI--EVMDATNREWWWGRVADGEGWFPASFVRLRVNQDEP 91

Query: 233 VPGTE 237
                
Sbjct: 92  ADDDA 96

>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D Length = 466

 Score = 41.5 bits (97), Expect = 3e-04
 Identities = 14/59 (23%), Positives = 25/59 (42%), Gaps = 4/59 (6%)

Query: 109 KTLANMMSDK---YYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTIGDRTARF 163
             +  ++SD       A + + + +  +L F   +VI V    N +WW G + D    F
Sbjct: 19  LAINELISDGSVVCAEALWDHVTMDDQELGFKAGDVIEVMDATNREWWWGRVADGEGWF 77

>1mv3_A MYC box dependent interacting protein 1; tumor suppressor, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 213

 Score = 56.2 bits (134), Expect = 2e-09
 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 13/69 (18%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAE---PGWLAG----------ELRGQTG 216
            + +A +++ + + DEL  + GD+++V   QN E    GWL G          +L    G
Sbjct: 143 FKVQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKKLEKCRG 202

Query: 217 WFPESYVEP 225
            FPE++ E 
Sbjct: 203 VFPENFTER 211

>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling protein; 2.01A {Caenorhabditis elegans} Length = 174

 Score = 54.4 bits (130), Expect = 3e-09
 Identities = 12/58 (20%), Positives = 24/58 (41%), Gaps = 1/58 (1%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
                    ++F      +L F+ G+ + + + +  +  W A    G TG  P +YV+
Sbjct: 116 PIIEVVVGTFKFTGERETDLPFEQGERLEI-LSKTNQDWWEARNALGTTGLVPANYVQ 172

>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling protein; 2.01A {Caenorhabditis elegans} Length = 174

 Score = 48.2 bits (114), Expect = 5e-07
 Identities = 14/110 (12%), Positives = 29/110 (26%), Gaps = 6/110 (5%)

Query: 50  HQRLKITKDHTIKAKEEGDLKDTQSSSDGSQDVFCSVHLQLSTKEKDLEVNNSNLDDLKK 109
                    + I+  E  +     +    +   F  +   L+  +  +    S       
Sbjct: 56  ADEGNAVCHYLIERGEPKEDGTAAAGVKIANQSFPDIPALLNHFKMRVLTEASL-----L 110

Query: 110 TLANMMSDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGD 158
                   +  +  + +      DL F Q E + +  K   DWW      
Sbjct: 111 AAYKKPIIEVVVGTFKFTGERETDLPFEQGERLEILSKTNQDWWEARNAL 160

>3a98_A DOCK2, dedicator of cytokinesis protein 2; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens} Length = 184

 Score = 54.7 bits (131), Expect = 4e-09
 Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 7/101 (6%)

Query: 160 TARFRGVSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL---RGQTG 216
            A +R   + R   AIY F      +LS Q GD++ +         W  G L   +   G
Sbjct: 8   MAPWRKADKERHGVAIYNFQGSGAPQLSLQIGDVVRIQET---CGDWYRGYLIKHKMLQG 64

Query: 217 WFPESYVEPCDETGEVVPGTELPGDKHHLELIAEVPENISD 257
            FP+S++   + T E    TE       + L  EV   + +
Sbjct: 65  IFPKSFIHIKEVTVEKRRNTE-NIIPAEIPLAQEVTTTLWE 104

>3a98_A DOCK2, dedicator of cytokinesis protein 2; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens} Length = 184

 Score = 49.3 bits (117), Expect = 3e-07
 Identities = 13/107 (12%), Positives = 34/107 (31%), Gaps = 5/107 (4%)

Query: 118 KYYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGTIGDRTARFRGVSEYRRYRAIYE 177
           ++ +A Y +  +    L+    +V+ + +   DW+ G +        G+           
Sbjct: 18  RHGVAIYNFQGSGAPQLSLQIGDVVRIQETCGDWYRGYLIKHKMLQ-GIFPKSFIHIKEV 76

Query: 178 FVSRNGDELSFQPGDIIMVPVKQNA----EPGWLAGELRGQTGWFPE 220
            V +  +  +  P +I +              W    +  +   F +
Sbjct: 77  TVEKRRNTENIIPAEIPLAQEVTTTLWEWGSIWKQLYVASKKERFLQ 123

>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2, signal transduction, adapter molecule, signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A 2eyw_A Length = 230

 Score = 54.1 bits (129), Expect = 1e-08
 Identities = 24/136 (17%), Positives = 44/136 (32%), Gaps = 5/136 (3%)

Query: 115 MSDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGTIGDRTARFRGVSEYRRYRA 174
              +  I    +DS       +    +   T  E           +       E    RA
Sbjct: 85  SPSRLRIGDQEFDSLPALLEFYKIHYLDTTTLIEPVSR---SRQGSGVILRQEEAEYVRA 141

Query: 175 IYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVP 234
           +++F   + ++L F+ GDI+ +   +  E  W A +  G+ G  P  YVE          
Sbjct: 142 LFDFNGNDEEDLPFKKGDILRI-RDKPEEQWWNAEDSEGKRGMIPVPYVEKYRPA-SASV 199

Query: 235 GTELPGDKHHLELIAE 250
              + G++        
Sbjct: 200 SALIGGNQEGSHPQPL 215

>1i1j_A Melanoma derived growth regulatory protein; SH3 subdomain, hormone/growth factor complex; 1.39A {Homo sapiens} SCOP: b.34.2.1 PDB: 1k0x_A 1hjd_A Length = 108

 Score = 51.2 bits (122), Expect = 1e-08
 Identities = 12/70 (17%), Positives = 25/70 (35%), Gaps = 9/70 (12%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAE-PGWLAGELRGQ--------TGWFPES 221
              A+ ++++ +   L+   G ++ V  K       +  G ++G          G+FP S
Sbjct: 24  MAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSS 83

Query: 222 YVEPCDETGE 231
            V        
Sbjct: 84  IVREDQTLKP 93

>1i1j_A Melanoma derived growth regulatory protein; SH3 subdomain, hormone/growth factor complex; 1.39A {Homo sapiens} SCOP: b.34.2.1 PDB: 1k0x_A 1hjd_A Length = 108

 Score = 41.5 bits (97), Expect = 3e-05
 Identities = 10/49 (20%), Positives = 20/49 (40%), Gaps = 4/49 (8%)

Query: 121 IAAYPYDSTEPGDLTFNQDEVIYVTKKE----NDWWTGTIGDRTARFRG 165
           +A   Y + +   LT ++ +V+YV  K       +W G++         
Sbjct: 26  VALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLA 74

>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A Length = 62

 Score = 50.1 bits (120), Expect = 1e-08
 Identities = 9/40 (22%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 118 KYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTI 156
           +  +A Y Y    P ++T  + +++ +    N DWW   +
Sbjct: 22  ELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEV 61

>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A Length = 62

 Score = 45.9 bits (109), Expect = 4e-07
 Identities = 8/45 (17%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL 211
           +      A+Y++  ++  E++ + GDI+   +  +    W   E+
Sbjct: 19  TGKELVLALYDYQEKSPREVTMKKGDILT--LLNSTNKDWWKVEV 61

>3jv3_A Intersectin-1; SH3 domain, DH domain, guanine nucleotide exchange factor, autoinhibition, domain-swapped, cell junction, cell project endocytosis; 2.40A {Mus musculus} PDB: 3gf9_A Length = 283

 Score = 53.6 bits (129), Expect = 2e-08
 Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 2/76 (2%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETG 230
           +   +Y++ ++N DEL+F  G II V      +P W  GE+ GQ G FP +YV+   +  
Sbjct: 4   QVIGMYDYTAQNDDELAFSKGQIINVL--NKEDPDWWKGEVSGQVGLFPSNYVKLTTDMD 61

Query: 231 EVVPGTELPGDKHHLE 246
                         L 
Sbjct: 62  PSQQWCSDLHLLDMLT 77

>3jv3_A Intersectin-1; SH3 domain, DH domain, guanine nucleotide exchange factor, autoinhibition, domain-swapped, cell junction, cell project endocytosis; 2.40A {Mus musculus} PDB: 3gf9_A Length = 283

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 119 YYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTIGDRTARFRGVSEY 169
             I  Y Y +    +L F++ ++I V  KE+ DWW G +  +   F      
Sbjct: 4   QVIGMYDYTAQNDDELAFSKGQIINVLNKEDPDWWKGEVSGQVGLFPSNYVK 55

>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens} Length = 526

 Score = 53.7 bits (128), Expect = 3e-08
 Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 4/59 (6%)

Query: 169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR--GQTGWFPESYVEP 225
                AIY    R  DE+  +PGDII   V  N   G+  G  R  G+TG +P   V  
Sbjct: 442 AHNQIAIYAHQPRTADEIPMEPGDIIG--VAGNHWDGYSKGVNRKLGRTGLYPSYKVRE 498

>1ug1_A KIAA1010 protein; structural genomics, SH3 domain, hypothetical protein BAA76854.1, riken structural genomics/proteomics initiative RSGI; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 92

 Score = 47.7 bits (113), Expect = 2e-07
 Identities = 11/74 (14%), Positives = 28/74 (37%), Gaps = 2/74 (2%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAE--PGWLAGELRGQTGWFPESYVEPCD 227
           + ++A   F +    ++S   GD++ V  K++          +     G+   S+++P +
Sbjct: 18  KLFQAERNFNAAQDLDVSLLEGDLVGVIKKKDPMGSQNRWLIDNGVTKGFVYSSFLKPYN 77

Query: 228 ETGEVVPGTELPGD 241
                   +  P  
Sbjct: 78  PRRSHSDASSGPSS 91

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 50.9 bits (122), Expect = 3e-07
 Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 1/61 (1%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC 226
           ++   + A+Y+FV+   + LS   G+ + V +  N    W   + +   GW P +Y+ P 
Sbjct: 41  NDPNLFVALYDFVASGDNTLSITKGEKLRV-LGYNHNGEWCEAQTKNGQGWVPSNYITPV 99

Query: 227 D 227
           +
Sbjct: 100 N 100

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 41.3 bits (97), Expect = 3e-04
 Identities = 5/37 (13%), Positives = 15/37 (40%)

Query: 116 SDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWW 152
               ++A Y + ++    L+  + E + V    ++  
Sbjct: 42  DPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGE 78

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 48.1 bits (115), Expect = 2e-06
 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 2/59 (3%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGW-LAGELRGQTGWFPESYVEPCD 227
               A Y F      +L F  GD++ + V    +P W  A    G+ G  P +YV+  +
Sbjct: 12  TECIAKYNFHGTAEQDLPFCKGDVLTI-VAVTKDPNWYKAKNKVGREGIIPANYVQKRE 69

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 40.4 bits (95), Expect = 5e-04
 Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 7/49 (14%)

Query: 116 SDKYYIAAYPYDSTEPGDLTFNQDEVIYV--TKKENDWW-----TGTIG 157
           S    IA Y +  T   DL F + +V+ +    K+ +W+      G  G
Sbjct: 10  SGTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREG 58

>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3 domain, structural genomics center for structural genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A* 1x27_A* Length = 175

 Score = 45.4 bits (107), Expect = 5e-06
 Identities = 12/63 (19%), Positives = 22/63 (34%)

Query: 116 SDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGTIGDRTARFRGVSEYRRYRAI 175
            D   IA + Y+ +  GDL F + E + + ++  +WW                +      
Sbjct: 11  QDNLVIALHSYEPSHDGDLGFEKGEQLRILEQSGEWWKAQSLTTGQEGFIPFNFVAKANS 70

Query: 176 YEF 178
            E 
Sbjct: 71  LEP 73

>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3 domain, structural genomics center for structural genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A* 1x27_A* Length = 175

 Score = 42.4 bits (99), Expect = 4e-05
 Identities = 10/62 (16%), Positives = 24/62 (38%), Gaps = 5/62 (8%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE--LRGQTGWFPESYVE 224
            +     A++ +   +  +L F+ G+ + +         W   +    GQ G+ P ++V 
Sbjct: 10  LQDNLVIALHSYEPSHDGDLGFEKGEQLRIL---EQSGEWWKAQSLTTGQEGFIPFNFVA 66

Query: 225 PC 226
             
Sbjct: 67  KA 68

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 46.3 bits (110), Expect = 8e-06
 Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 2/57 (3%)

Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR-GQTGWFPESYVEPCD 227
           + A+Y++ SR   +LSF+ G+ + + V       WLA  L  GQTG+ P +YV P D
Sbjct: 5   FVALYDYESRTETDLSFKKGERLQI-VNNTEGDWWLAHSLSTGQTGYIPSNYVAPSD 60

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 40.5 bits (95), Expect = 5e-04
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)

Query: 118 KYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWW 152
             ++A Y Y+S    DL+F + E + +    E DWW
Sbjct: 3   TTFVALYDYESRTETDLSFKKGERLQIVNNTEGDWW 38

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.2 bits (106), Expect = 2e-05
 Identities = 37/272 (13%), Positives = 77/272 (28%), Gaps = 101/272 (37%)

Query: 15  LLSVILTAIAPQTIVTPRLMVHGAPLLLRIL-----------QNWAH---QRLKITKDHT 60
           LL   L    PQ +  PR ++   P  L I+            NW H    +L    + +
Sbjct: 306 LLLKYLD-CRPQDL--PREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESS 362

Query: 61  IKAKEEGDLKD-----------------------TQSSSDGSQDVFCSVHLQLSTKEKDL 97
           +   E  + +                                  V   +H + S  EK  
Sbjct: 363 LNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLH-KYSLVEKQP 421

Query: 98  EVNNSNLDDL----------KKTLANMMSDKY------------------YIAAY-PY-- 126
           + +  ++  +          +  L   + D Y                  Y  ++  +  
Sbjct: 422 KESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHL 481

Query: 127 DSTEPG-----------DLTFNQDEVIYVTKKENDWWTGTIGDRTARFRGVSEYRRY--- 172
            + E             D  F + ++ + +   N   +G+I +   + +    Y+ Y   
Sbjct: 482 KNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNA--SGSILNTLQQLK---FYKPYICD 536

Query: 173 ---------RAIYEFVSRNGDELSFQP-GDII 194
                     AI +F+ +  + L      D++
Sbjct: 537 NDPKYERLVNAILDFLPKIEENLICSKYTDLL 568

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 44.3 bits (105), Expect = 3e-05
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 3/64 (4%)

Query: 165 GVSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR-GQTGWFPESYV 223
           G        A+Y++ + + ++LSFQ GD ++  V + +   W A  L   + G+ P +YV
Sbjct: 4   GSGIRIIVVALYDYEAIHHEDLSFQKGDQMV--VLEESGEWWKARSLATRKEGYIPSNYV 61

Query: 224 EPCD 227
              D
Sbjct: 62  ARVD 65

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 44.3 bits (105), Expect = 4e-05
 Identities = 9/36 (25%), Positives = 19/36 (52%)

Query: 117 DKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWW 152
               +A Y Y++    DL+F + + + V ++  +WW
Sbjct: 8   RIIVVALYDYEAIHHEDLSFQKGDQMVVLEESGEWW 43

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 42.9 bits (101), Expect = 1e-04
 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 2/76 (2%)

Query: 153 TGTIGDRTARFRGVSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR 212
           + T+               + A+Y++ SR   +LSF+ G+ + + V       WLA  L 
Sbjct: 69  SDTVTSPQRAGPLAGGVTTFVALYDYESRTETDLSFKKGERLQI-VNNTEGDWWLAHSLS 127

Query: 213 -GQTGWFPESYVEPCD 227
            GQTG+ P +YV P D
Sbjct: 128 TGQTGYIPSNYVAPSD 143

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	336
1ng2_A	193	Neutrophil cytosolic factor 1; P47PHOX, autoinhibi	99.92
2eyz_A	304	V-CRK sarcoma virus CT10 oncogene homolog isoform	99.91
1ng2_A	193	Neutrophil cytosolic factor 1; P47PHOX, autoinhibi	99.89
1gri_A	217	Growth factor bound protein 2; SH2, SH3, signal tr	99.88
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	99.87
2lqn_A	303	CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT	99.77
2eyz_A	304	V-CRK sarcoma virus CT10 oncogene homolog isoform	99.85
1gri_A	217	Growth factor bound protein 2; SH2, SH3, signal tr	99.84
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	99.82
2lqn_A	303	CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT	99.69
2dyb_A	341	Neutrophil cytosol factor 4; P40(PHOX), NADPH oxid	99.77
1udl_A	98	Intersectin 2, KIAA1256; beta barrel, SH3 domain,	99.67
2dyb_A	341	Neutrophil cytosol factor 4; P40(PHOX), NADPH oxid	99.65
2lx7_A	60	GAS-7, growth arrest-specific protein 7; structura	99.61
2lj0_A	65	Sorbin and SH3 domain-containing protein 1; R85FL,	99.56
2bz8_A	58	SH3-domain kinase binding protein 1; SH3 domain, C	99.52
2nwm_A	65	Vinexin; cell adhesion; NMR {Homo sapiens}	99.52
2fei_A	65	CD2-associated protein; CMS SH3 domain, structural	99.51
2ydl_A	69	SH3 domain-containing kinase-binding protein 1; si	99.51
1x43_A	81	Endophilin B1, SH3 domain GRB2-like protein B1; st	99.5
1w70_A	60	Neutrophil cytosol factor 4; NADPH oxidase, P40PHO	99.5
1uti_A	58	GRB2-related adaptor protein 2; signaling protein	99.5
2jte_A	64	CD2-associated protein; SH3 domain, coiled coil, c	99.5
1jo8_A	58	ABP1P, actin binding protein; SH3 domain actin-bin	99.5
1udl_A	98	Intersectin 2, KIAA1256; beta barrel, SH3 domain,	99.5
2eyx_A	67	V-CRK sarcoma virus CT10 oncogene homolog isoform	99.5
2j6f_A	62	CD2-associated protein; metal-binding, immune resp	99.5
2g6f_X	59	RHO guanine nucleotide exchange factor 7; SH3 doma	99.5
2ebp_A	73	SAM and SH3 domain-containing protein 1; proline-g	99.49
2ew3_A	68	SH3-containing GRB2-like protein 3; SH3GL3, soluti	99.49
1oot_A	60	Hypothetical 40.4 kDa protein in PES4-His2 interge	99.49
2i0n_A	80	Class VII unconventional myosin; beta-sheet loop,	99.49
1sem_A	58	SEM-5; SRC-homology 3 (SH3) domain, peptide-bindin	99.49
2yuo_A	78	CIP85, RUN and TBC1 domain containing 3; structura	99.49
1k4u_S	62	Phagocyte NADPH oxidase subunit P67PHOX; SH3-pepti	99.49
2dlp_A	85	KIAA1783 protein; SH3 domain, structural genomics,	99.49
1uff_A	93	Intersectin 2; beta barrel, SH3 domain, endocytosi	99.49
2dl8_A	72	SLIT-ROBO RHO GTPase-activating protein 2; SH3 dom	99.49
2bzy_A	67	CRK-like protein, CRKL SH3C; SH3 domain, dimer, nu	99.48
2xmf_A	60	Myosin 1E SH3; motor protein, SH3 domain; HET: DIA	99.48
2ak5_A	64	RHO guanine nucleotide exchange factor 7; adaptor	99.48
1zx6_A	58	YPR154WP; SH3 domain, protein binding; 1.60A {Sacc	99.48
2dl4_A	68	Protein STAC; SH3 domain, STAC protein, SRC homolo	99.48
2kxd_A	73	11-MER peptide, SH3 domain of spectrin alpha CHAI;	99.48
2dm1_A	73	Protein VAV-2; RHO family guanine nucleotide excha	99.48
2vwf_A	58	Growth factor receptor-bound protein 2; polymorphi	99.48
2dmo_A	68	Neutrophil cytosol factor 2; SH3 domain, structura	99.48
2drm_A	58	Acanthamoeba myosin IB; SH3 domain, contractIle pr	99.48
2da9_A	70	SH3-domain kinase binding protein 1; structural ge	99.48
3ulr_B	65	SRC substrate cortactin; SH3, protein-protein inte	99.48
2pqh_A	80	Spectrin alpha chain, brain; SH3 domain, chimera,	99.47
2dbm_A	73	SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH	99.47
2ekh_A	80	SH3 and PX domain-containing protein 2A; SH3 domai	99.47
3c0c_A	73	Endophilin-A2; endocytosis, SH3, voltage-gated cal	99.47
2djq_A	68	SH3 domain containing ring finger 2; MUS musculus	99.47
1wyx_A	69	CRK-associated substrate; beta sheets, cell adhesi	99.47
2ed0_A	78	ABL interactor 2; coiled coil, cytoskeleton, nucle	99.47
2ed1_A	76	130 kDa phosphatidylinositol 4,5-biphosphate- depe	99.47
4e6r_A	58	Cytoplasmic protein NCK2; SH3 domain, protein bind	99.46
2k9g_A	73	SH3 domain-containing kinase-binding protein 1; CI	99.46
2ysq_A	81	RHO guanine nucleotide exchange factor 9; SH3 doma	99.46
1x2p_A	68	Protein arginine N-methyltransferase 2; SH3 domain	99.46
2gnc_A	60	SLIT-ROBO RHO GTPase-activating protein 1; beta ba	99.46
1x2k_A	68	OSTF1, osteoclast stimulating factor 1; SH3 domain	99.46
2dl3_A	68	Sorbin and SH3 domain-containing protein 1; ponsin	99.46
3ngp_A	62	Spectrin alpha chain, brain; beta barrel, structur	99.46
2yun_A	79	Nostrin; nitric oxide synthase trafficker, structu	99.46
3rnj_A	67	Brain-specific angiogenesis inhibitor 1-associate	99.46
2ege_A	75	Uncharacterized protein KIAA1666; SH3 domain, KIAA	99.46
2dl7_A	73	KIAA0769 protein; SH3 domain, FCHSD2, structural g	99.46
1z9q_A	79	Neutrophil cytosol factor 4; oxidoreductase activa	99.46
1ugv_A	72	KIAA0621, olygophrenin-1 like protein; beta barrel	99.45
3thk_A	73	Spectrin alpha chain, brain; SH3 domain, chimera,	99.45
1b07_A	65	Protein (proto-oncogene CRK (CRK)); SH3 domain, in	99.45
2epd_A	76	RHO GTPase-activating protein 4; SH3 domain, struc	99.45
1zlm_A	58	Osteoclast stimulating factor 1; beta barrel, sign	99.45
1nm7_A	69	Peroxisomal membrane protein PAS20; yeast, PEX5P,	99.45
1cka_A	57	C-CRK N-terminal SH3 domain; complex (oncogene pro	99.45
1tg0_A	68	BBC1 protein, myosin tail region-interacting prote	99.45
1ruw_A	69	Myosin-3 isoform, MYO3; SH3 domain, yeast, high-th	99.45
2cre_A	71	HEF-like protein; SH3 domain, SRC homology 3 domai	99.45
1y0m_A	61	1-phosphatidylinositol-4,5-bisphosphate phosphodie	99.45
2j05_A	65	RAS GTPase-activating protein 1; GTPase activation	99.44
2dnu_A	71	RUH-061, SH3 multiple domains 1; RSGI, structural	99.44
2fpe_A	62	C-JUN-amino-terminal kinase interacting protein 1;	99.44
2jt4_A	71	Cytoskeleton assembly control protein SLA1; endocy	99.44
2lcs_A	73	NAP1-binding protein 2; adaptor, transferase, sign	99.44
1neg_A	83	Spectrin alpha chain, brain; SH3-domain fold, five	99.44
1uj0_A	62	Signal transducing adaptor molecule (SH3 domain an	99.44
2oaw_A	65	Spectrin alpha chain, brain; SH3 domain, chimera,	99.44
2x3w_D	60	Syndapin I, protein kinase C and casein kinase sub	99.44
2lx7_A	60	GAS-7, growth arrest-specific protein 7; structura	99.44
2d8h_A	80	SH3YL1 protein; SH3 domain, hypothetical protein S	99.44
2a28_A	54	BZZ1 protein; SH3 domain, signaling protein; 1.07A	99.44
3u23_A	65	CD2-associated protein; structural genomics, struc	99.44
2dil_A	69	Proline-serine-threonine phosphatase-interacting p	99.44
2ega_A	70	SH3 and PX domain-containing protein 2A; SH3 domai	99.44
2v1q_A	60	SLA1, cytoskeleton assembly control protein SLA1;	99.44
1wi7_A	68	SH3-domain kinase binding protein 1; beta barrel,	99.43
1u5s_A	71	Cytoplasmic protein NCK2; protein-protein complex,	99.43
2lj0_A	65	Sorbin and SH3 domain-containing protein 1; R85FL,	99.43
1uhf_A	69	Intersectin 2; beta barrel, SH3 domain, riken stru	99.43
2fpf_A	71	C-JUN-amino-terminal kinase interacting protein 1;	99.43
2dbk_A	88	CRK-like protein; structural genomics, NPPSFA, nat	99.43
1uhc_A	79	KIAA1010 protein; beta barrel, SH3, human cDNA, st	99.43
4glm_A	72	Dynamin-binding protein; SH3 domain, DNMBP, struct	99.42
1zuy_A	58	Myosin-5 isoform; SH3 domain, contractIle protein;	99.42
2cub_A	88	Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor	99.42
1x69_A	79	Cortactin isoform A; SH3 domain, CTTN, oncogene EM	99.42
2csi_A	76	RIM-BP2, RIM binding protein 2; SH3 domain, struct	99.42
2kxc_A	67	Brain-specific angiogenesis inhibitor 1-associate	99.42
4esr_A	69	Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domai	99.42
4f14_A	64	Nebulette; SH3 domain, heart muscle, actin-binding	99.42
2o9s_A	67	Ponsin; SH3 domain, signaling protein; 0.83A {Homo	99.42
1wxt_A	68	Hypothetical protein FLJ21522; SH3 domain, EPS8-re	99.42
1zuu_A	58	BZZ1 protein; SH3 domain, unknown function; 0.97A	99.42
1wx6_A	91	Cytoplasmic protein NCK2; SH3 domain, structural g	99.42
1yn8_A	59	NBP2, NAP1-binding protein 2; SH3 domain, unknown	99.42
1spk_A	72	RSGI RUH-010, riken cDNA 1300006M19; structural ge	99.42
2iim_A	62	Proto-oncogene tyrosine-protein kinase LCK; beta-b	99.41
2l0a_A	72	STAM-1, signal transducing adapter molecule 1; str	99.41
3eg3_A	63	Proto-oncogene tyrosine-protein kinase ABL1; beta,	99.41
1x2q_A	88	Signal transducing adapter molecule 2; SH3 domain,	99.41
3h0h_A	73	Proto-oncogene tyrosine-protein kinase FYN; beta b	99.41
2eqi_A	69	Phospholipase C, gamma 2; SH3 domain, PLCG2, struc	99.41
2i0n_A	80	Class VII unconventional myosin; beta-sheet loop,	99.41
1ue9_A	80	Intersectin 2; beta barrel, SH3 domain, riken stru	99.41
1gbq_A	74	GRB2; complex (signal transduction/peptide), SH3 d	99.41
1j3t_A	74	Intersectin 2; beta barrel, SH3 domain, riken stru	99.41
2b86_A	67	Cytoplasmic protein NCK2; NCK SH3 domain, signalin	99.41
2jw4_A	72	Cytoplasmic protein NCK1; SH3 domain, phosphorylat	99.41
1s1n_A	68	Nephrocystin 1; beta barrel, cell adhesion; NMR {H	99.41
1ujy_A	76	RHO guanine nucleotide exchange factor 6; structur	99.41
1gl5_A	67	Tyrosine-protein kinase TEC; transferase, ATP-bind	99.41
3cqt_A	79	P59-FYN, proto-oncogene tyrosine-protein kinase FY	99.41
1csk_A	71	C-SRC SH3 domain; phosphotransferase; 2.50A {Homo	99.4
2egc_A	75	SH3 and PX domain-containing protein 2A; SH3 domai	99.4
2gqi_A	71	RAS GTPase-activating protein 1; GAP, RAS P21 prot	99.4
2ct3_A	70	Vinexin; SH3 domian, structural genomics, NPPSFA,	99.4
2yup_A	90	Vinexin; sorbin and SH3 domain-containing protein	99.4
2ct4_A	70	CDC42-interacting protein 4; thyroid receptor inte	99.4
2j6f_A	62	CD2-associated protein; metal-binding, immune resp	99.39
2bz8_A	58	SH3-domain kinase binding protein 1; SH3 domain, C	99.39
2csq_A	97	RIM-BP2, RIM binding protein 2; SH3 domain, struct	99.39
1i07_A	60	Epidermal growth factor receptor kinase substrate	99.39
2ecz_A	70	Sorbin and SH3 domain-containing protein 1; glycop	99.39
1w1f_A	65	Tyrosine-protein kinase LYN; SH3-domain, SH3 domai	99.39
2o2o_A	92	SH3-domain kinase-binding protein 1; CIN85, protei	99.38
2dl4_A	68	Protein STAC; SH3 domain, STAC protein, SRC homolo	99.38
1x6b_A	79	RHO guanine exchange factor (GEF) 16; SH3 domain,	99.38
1wie_A	96	RIM binding protein 2; beta barrel, KIAA0318 prote	99.38
2cuc_A	70	SH3 domain containing ring finger 2; structural ge	99.38
2ebp_A	73	SAM and SH3 domain-containing protein 1; proline-g	99.38
1aww_A	67	ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linke	99.38
2ke9_A	83	Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosp	99.38
2fei_A	65	CD2-associated protein; CMS SH3 domain, structural	99.38
2e5k_A	94	Suppressor of T-cell receptor signaling 1; SH3 dom	99.38
4ag1_C	84	Fynomer; hydrolase-de novo protein complex, inhibi	99.38
2enm_A	77	Sorting nexin-9; SH3-like barrel, protein transpor	99.37
2eyx_A	67	V-CRK sarcoma virus CT10 oncogene homolog isoform	99.37
1w70_A	60	Neutrophil cytosol factor 4; NADPH oxidase, P40PHO	99.37
2rf0_A	89	Mitogen-activated protein kinase kinase kinase 10;	99.37
2k2m_A	68	EPS8-like protein 1; alternative splicing, coiled	99.37
2ew3_A	68	SH3-containing GRB2-like protein 3; SH3GL3, soluti	99.37
2dl5_A	78	KIAA0769 protein; SH3 domain, FCHSD2, structural g	99.37
2ekh_A	80	SH3 and PX domain-containing protein 2A; SH3 domai	99.37
2djq_A	68	SH3 domain containing ring finger 2; MUS musculus	99.36
2m0y_A	74	Dedicator of cytokinesis protein 1; apoptosis; NMR	99.36
2ed0_A	78	ABL interactor 2; coiled coil, cytoskeleton, nucle	99.36
2dbm_A	73	SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH	99.36
2d8j_A	77	FYN-related kinase; SH3 domain, structural genomic	99.36
2yuo_A	78	CIP85, RUN and TBC1 domain containing 3; structura	99.36
2ysq_A	81	RHO guanine nucleotide exchange factor 9; SH3 doma	99.36
3c0c_A	73	Endophilin-A2; endocytosis, SH3, voltage-gated cal	99.36
2dmo_A	68	Neutrophil cytosol factor 2; SH3 domain, structura	99.36
1x2p_A	68	Protein arginine N-methyltransferase 2; SH3 domain	99.36
2dl8_A	72	SLIT-ROBO RHO GTPase-activating protein 2; SH3 dom	99.35
2nwm_A	65	Vinexin; cell adhesion; NMR {Homo sapiens}	99.35
2xmf_A	60	Myosin 1E SH3; motor protein, SH3 domain; HET: DIA	99.35
1k4u_S	62	Phagocyte NADPH oxidase subunit P67PHOX; SH3-pepti	99.35
2bzy_A	67	CRK-like protein, CRKL SH3C; SH3 domain, dimer, nu	99.35
2epd_A	76	RHO GTPase-activating protein 4; SH3 domain, struc	99.35
1jo8_A	58	ABP1P, actin binding protein; SH3 domain actin-bin	99.35
2dl3_A	68	Sorbin and SH3 domain-containing protein 1; ponsin	99.35
3ulr_B	65	SRC substrate cortactin; SH3, protein-protein inte	99.35
1i1j_A	108	Melanoma derived growth regulatory protein; SH3 su	99.35
2dbk_A	88	CRK-like protein; structural genomics, NPPSFA, nat	99.34
2dlp_A	85	KIAA1783 protein; SH3 domain, structural genomics,	99.34
1x2k_A	68	OSTF1, osteoclast stimulating factor 1; SH3 domain	99.34
2v1r_A	80	Peroxisomal membrane protein PAS20; protein transp	99.34
1wxb_A	68	Epidermal growth factor receptor pathway substrate	99.34
1wxu_A	93	Peroxisomal biogenesis factor 13; SH3 domain, PEX1	99.34
2yuq_A	85	Tyrosine-protein kinase ITK/TSK; T-cell-specific k	99.34
2jte_A	64	CD2-associated protein; SH3 domain, coiled coil, c	99.34
1jqq_A	92	PEX13P, peroxisomal membrane protein PAS20, PAS20P	99.34
1uti_A	58	GRB2-related adaptor protein 2; signaling protein	99.33
1sem_A	58	SEM-5; SRC-homology 3 (SH3) domain, peptide-bindin	99.33
2g6f_X	59	RHO guanine nucleotide exchange factor 7; SH3 doma	99.33
2kgt_A	72	Tyrosine-protein kinase 6; SH3 domain, SRC kinase,	99.33
2cub_A	88	Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor	99.33
2ed1_A	76	130 kDa phosphatidylinositol 4,5-biphosphate- depe	99.33
1z9q_A	79	Neutrophil cytosol factor 4; oxidoreductase activa	99.33
3o5z_A	90	Phosphatidylinositol 3-kinase regulatory subunit;	99.33
2ak5_A	64	RHO guanine nucleotide exchange factor 7; adaptor	99.32
2ege_A	75	Uncharacterized protein KIAA1666; SH3 domain, KIAA	99.32
1x69_A	79	Cortactin isoform A; SH3 domain, CTTN, oncogene EM	99.32
2o2o_A	92	SH3-domain kinase-binding protein 1; CIN85, protei	99.32
2ydl_A	69	SH3 domain-containing kinase-binding protein 1; si	99.32
2csq_A	97	RIM-BP2, RIM binding protein 2; SH3 domain, struct	99.32
2fpf_A	71	C-JUN-amino-terminal kinase interacting protein 1;	99.32
2oi3_A	86	Tyrosine-protein kinase HCK; human HCK, SH3, SRC-t	99.32
1x6g_A	81	Megakaryocyte-associated tyrosine-protein kinase;	99.32
4e6r_A	58	Cytoplasmic protein NCK2; SH3 domain, protein bind	99.32
1hsq_A	71	Phospholipase C-gamma (SH3 domain); phosphoric die	99.32
2cre_A	71	HEF-like protein; SH3 domain, SRC homology 3 domai	99.31
1wie_A	96	RIM binding protein 2; beta barrel, KIAA0318 prote	99.31
2dl7_A	73	KIAA0769 protein; SH3 domain, FCHSD2, structural g	99.31
1zx6_A	58	YPR154WP; SH3 domain, protein binding; 1.60A {Sacc	99.31
1wi7_A	68	SH3-domain kinase binding protein 1; beta barrel,	99.31
2gnc_A	60	SLIT-ROBO RHO GTPase-activating protein 1; beta ba	99.3
2da9_A	70	SH3-domain kinase binding protein 1; structural ge	99.3
2vwf_A	58	Growth factor receptor-bound protein 2; polymorphi	99.3
1x43_A	81	Endophilin B1, SH3 domain GRB2-like protein B1; st	99.3
2k9g_A	73	SH3 domain-containing kinase-binding protein 1; CI	99.3
2cud_A	79	SRC-like-adapter; SH3 domain, negative mitogenesis	99.3
2vkn_A	70	Protein SSU81; membrane, SH3 domain, transmembrane	99.3
2drm_A	58	Acanthamoeba myosin IB; SH3 domain, contractIle pr	99.3
1ue9_A	80	Intersectin 2; beta barrel, SH3 domain, riken stru	99.3
2d8h_A	80	SH3YL1 protein; SH3 domain, hypothetical protein S	99.3
1x2q_A	88	Signal transducing adapter molecule 2; SH3 domain,	99.3
2yun_A	79	Nostrin; nitric oxide synthase trafficker, structu	99.3
2dil_A	69	Proline-serine-threonine phosphatase-interacting p	99.29
1tg0_A	68	BBC1 protein, myosin tail region-interacting prote	99.29
1ugv_A	72	KIAA0621, olygophrenin-1 like protein; beta barrel	99.29
2rqv_A	108	BUD emergence protein 1; BEM1P, SH3, CDC42P, cytop	99.29
2ega_A	70	SH3 and PX domain-containing protein 2A; SH3 domai	99.29
4glm_A	72	Dynamin-binding protein; SH3 domain, DNMBP, struct	99.29
2kxd_A	73	11-MER peptide, SH3 domain of spectrin alpha CHAI;	99.29
1oot_A	60	Hypothetical 40.4 kDa protein in PES4-His2 interge	99.29
2yup_A	90	Vinexin; sorbin and SH3 domain-containing protein	99.29
2fpe_A	62	C-JUN-amino-terminal kinase interacting protein 1;	99.29
2dnu_A	71	RUH-061, SH3 multiple domains 1; RSGI, structural	99.28
1neg_A	83	Spectrin alpha chain, brain; SH3-domain fold, five	99.28
1uhf_A	69	Intersectin 2; beta barrel, SH3 domain, riken stru	99.28
1j3t_A	74	Intersectin 2; beta barrel, SH3 domain, riken stru	99.28
3u23_A	65	CD2-associated protein; structural genomics, struc	99.28
2dm1_A	73	Protein VAV-2; RHO family guanine nucleotide excha	99.28
2pqh_A	80	Spectrin alpha chain, brain; SH3 domain, chimera,	99.28
2csi_A	76	RIM-BP2, RIM binding protein 2; SH3 domain, struct	99.28
1ujy_A	76	RHO guanine nucleotide exchange factor 6; structur	99.28
2dl5_A	78	KIAA0769 protein; SH3 domain, FCHSD2, structural g	99.28
3ngp_A	62	Spectrin alpha chain, brain; beta barrel, structur	99.28
2j05_A	65	RAS GTPase-activating protein 1; GTPase activation	99.28
1b07_A	65	Protein (proto-oncogene CRK (CRK)); SH3 domain, in	99.27
3reb_B	90	Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain	99.27
2ecz_A	70	Sorbin and SH3 domain-containing protein 1; glycop	99.27
2gqi_A	71	RAS GTPase-activating protein 1; GAP, RAS P21 prot	99.27
1uhc_A	79	KIAA1010 protein; beta barrel, SH3, human cDNA, st	99.27
1uff_A	93	Intersectin 2; beta barrel, SH3 domain, endocytosi	99.27
3cqt_A	79	P59-FYN, proto-oncogene tyrosine-protein kinase FY	99.27
2lcs_A	73	NAP1-binding protein 2; adaptor, transferase, sign	99.27
2jxb_A	86	T-cell surface glycoprotein CD3 epsilon chain, cyt	99.27
3thk_A	73	Spectrin alpha chain, brain; SH3 domain, chimera,	99.27
1ruw_A	69	Myosin-3 isoform, MYO3; SH3 domain, yeast, high-th	99.27
1cka_A	57	C-CRK N-terminal SH3 domain; complex (oncogene pro	99.27
1wyx_A	69	CRK-associated substrate; beta sheets, cell adhesi	99.27
2jmc_A	77	Spectrin alpha chain, brain and P41 peptide chimer	99.27
1u5s_A	71	Cytoplasmic protein NCK2; protein-protein complex,	99.26
2jt4_A	71	Cytoskeleton assembly control protein SLA1; endocy	99.26
1awj_A	77	ITK; transferase, regulatory intramolecular comple	99.26
1s1n_A	68	Nephrocystin 1; beta barrel, cell adhesion; NMR {H	99.26
1gl5_A	67	Tyrosine-protein kinase TEC; transferase, ATP-bind	99.26
1wx6_A	91	Cytoplasmic protein NCK2; SH3 domain, structural g	99.26
1spk_A	72	RSGI RUH-010, riken cDNA 1300006M19; structural ge	99.26
2kbt_A	142	Chimera of proto-oncogene VAV, linker, immunoglobu	99.26
4ag1_C	84	Fynomer; hydrolase-de novo protein complex, inhibi	99.26
3h0h_A	73	Proto-oncogene tyrosine-protein kinase FYN; beta b	99.26
2yt6_A	109	Adult MALE urinary bladder cDNA, riken FULL- lengt	99.26
1bb9_A	115	Amphiphysin 2; transferase, SH3 domain; 2.20A {Rat	99.25
2cuc_A	70	SH3 domain containing ring finger 2; structural ge	99.25
3i5r_A	83	Phosphatidylinositol 3-kinase regulatory subunit a	99.25
1csk_A	71	C-SRC SH3 domain; phosphotransferase; 2.50A {Homo	99.25
3rnj_A	67	Brain-specific angiogenesis inhibitor 1-associate	99.25
1y0m_A	61	1-phosphatidylinositol-4,5-bisphosphate phosphodie	99.25
1zlm_A	58	Osteoclast stimulating factor 1; beta barrel, sign	99.24
3eg3_A	63	Proto-oncogene tyrosine-protein kinase ABL1; beta,	99.24
2jmc_A	77	Spectrin alpha chain, brain and P41 peptide chimer	99.24
2ct3_A	70	Vinexin; SH3 domian, structural genomics, NPPSFA,	99.24
1uj0_A	62	Signal transducing adaptor molecule (SH3 domain an	99.24
1w1f_A	65	Tyrosine-protein kinase LYN; SH3-domain, SH3 domai	99.24
2kxc_A	67	Brain-specific angiogenesis inhibitor 1-associate	99.24
2eqi_A	69	Phospholipase C, gamma 2; SH3 domain, PLCG2, struc	99.23
2a28_A	54	BZZ1 protein; SH3 domain, signaling protein; 1.07A	99.23
2oaw_A	65	Spectrin alpha chain, brain; SH3 domain, chimera,	99.23
2ke9_A	83	Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosp	99.23
2l0a_A	72	STAM-1, signal transducing adapter molecule 1; str	99.23
2kym_A	120	BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI	99.23
2rqr_A	119	CED-12 homolog, engulfment and cell motility prote	99.23
2v1q_A	60	SLA1, cytoskeleton assembly control protein SLA1;	99.22
1nm7_A	69	Peroxisomal membrane protein PAS20; yeast, PEX5P,	99.22
2x3w_D	60	Syndapin I, protein kinase C and casein kinase sub	99.22
2o9s_A	67	Ponsin; SH3 domain, signaling protein; 0.83A {Homo	99.22
1gbq_A	74	GRB2; complex (signal transduction/peptide), SH3 d	99.22
1zuu_A	58	BZZ1 protein; SH3 domain, unknown function; 0.97A	99.22
1tuc_A	63	Alpha-spectrin; capping protein, calcium-binding,	99.22
2iim_A	62	Proto-oncogene tyrosine-protein kinase LCK; beta-b	99.22
4f14_A	64	Nebulette; SH3 domain, heart muscle, actin-binding	99.22
1x6b_A	79	RHO guanine exchange factor (GEF) 16; SH3 domain,	99.21
2jw4_A	72	Cytoplasmic protein NCK1; SH3 domain, phosphorylat	99.21
2enm_A	77	Sorting nexin-9; SH3-like barrel, protein transpor	99.21
2rqv_A	108	BUD emergence protein 1; BEM1P, SH3, CDC42P, cytop	99.21
1zuy_A	58	Myosin-5 isoform; SH3 domain, contractIle protein;	99.21
1wxt_A	68	Hypothetical protein FLJ21522; SH3 domain, EPS8-re	99.21
2yuq_A	85	Tyrosine-protein kinase ITK/TSK; T-cell-specific k	99.21
2egc_A	75	SH3 and PX domain-containing protein 2A; SH3 domai	99.21
1jqq_A	92	PEX13P, peroxisomal membrane protein PAS20, PAS20P	99.2
4esr_A	69	Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domai	99.2
1yn8_A	59	NBP2, NAP1-binding protein 2; SH3 domain, unknown	99.2
1gcq_C	70	VAV proto-oncogene; SH3 domain, protein-protein co	99.2
1aww_A	67	ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linke	99.19
2ct4_A	70	CDC42-interacting protein 4; thyroid receptor inte	99.19
1k1z_A	78	VAV; SH3, proto-oncogene, signaling protein; NMR {	99.19
1mv3_A	213	MYC box dependent interacting protein 1; tumor sup	99.17
1x6g_A	81	Megakaryocyte-associated tyrosine-protein kinase;	99.17
1v1c_A	71	Obscurin; muscle, sarcomere, adapter, myogenesis,	99.17
2rf0_A	89	Mitogen-activated protein kinase kinase kinase 10;	99.17
2oi3_A	86	Tyrosine-protein kinase HCK; human HCK, SH3, SRC-t	99.17
2kgt_A	72	Tyrosine-protein kinase 6; SH3 domain, SRC kinase,	99.17
2b86_A	67	Cytoplasmic protein NCK2; NCK SH3 domain, signalin	99.16
1i07_A	60	Epidermal growth factor receptor kinase substrate	99.16
1wxu_A	93	Peroxisomal biogenesis factor 13; SH3 domain, PEX1	99.16
2v1r_A	80	Peroxisomal membrane protein PAS20; protein transp	99.16
2k2m_A	68	EPS8-like protein 1; alternative splicing, coiled	99.15
1wxb_A	68	Epidermal growth factor receptor pathway substrate	99.15
1tuc_A	63	Alpha-spectrin; capping protein, calcium-binding,	99.15
2d8j_A	77	FYN-related kinase; SH3 domain, structural genomic	99.15
2cud_A	79	SRC-like-adapter; SH3 domain, negative mitogenesis	99.14
2e5k_A	94	Suppressor of T-cell receptor signaling 1; SH3 dom	99.14
1g2b_A	62	Spectrin alpha chain; capping protein, calcium-bin	99.13
1bb9_A	115	Amphiphysin 2; transferase, SH3 domain; 2.20A {Rat	99.12
1hsq_A	71	Phospholipase C-gamma (SH3 domain); phosphoric die	99.12
1i1j_A	108	Melanoma derived growth regulatory protein; SH3 su	99.11
3jv3_A	283	Intersectin-1; SH3 domain, DH domain, guanine nucl	99.11
1gcq_C	70	VAV proto-oncogene; SH3 domain, protein-protein co	99.11
3qwx_X	174	Cell death abnormality protein 2; cell engulfment,	99.1
2dvj_A	230	V-CRK sarcoma virus CT10 oncogene homolog, isoform	99.1
1k1z_A	78	VAV; SH3, proto-oncogene, signaling protein; NMR {	99.09
2kbt_A	142	Chimera of proto-oncogene VAV, linker, immunoglobu	99.09
2vkn_A	70	Protein SSU81; membrane, SH3 domain, transmembrane	99.09
2m0y_A	74	Dedicator of cytokinesis protein 1; apoptosis; NMR	99.08
2yt6_A	109	Adult MALE urinary bladder cDNA, riken FULL- lengt	99.08
2rqr_A	119	CED-12 homolog, engulfment and cell motility prote	99.07
1u3o_A	82	Huntingtin-associated protein-interacting protein;	99.06
3reb_B	90	Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain	99.04
2kym_A	120	BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI	99.04
1mv3_A	213	MYC box dependent interacting protein 1; tumor sup	99.03
4d8k_A	175	Tyrosine-protein kinase LCK; protein kinases, SH2	99.03
2jxb_A	86	T-cell surface glycoprotein CD3 epsilon chain, cyt	99.02
1g2b_A	62	Spectrin alpha chain; capping protein, calcium-bin	99.0
3o5z_A	90	Phosphatidylinositol 3-kinase regulatory subunit;	99.0
1awj_A	77	ITK; transferase, regulatory intramolecular comple	99.0
3a98_A	184	DOCK2, dedicator of cytokinesis protein 2; protein	98.99
2pz1_A	466	RHO guanine nucleotide exchange factor 4; helical	98.97
3i5r_A	83	Phosphatidylinositol 3-kinase regulatory subunit a	98.95
2dvj_A	230	V-CRK sarcoma virus CT10 oncogene homolog, isoform	98.91
3qwx_X	174	Cell death abnormality protein 2; cell engulfment,	98.91
3jv3_A	283	Intersectin-1; SH3 domain, DH domain, guanine nucl	98.91
1v1c_A	71	Obscurin; muscle, sarcomere, adapter, myogenesis,	98.9
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	98.84
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	98.83
2de0_X	526	Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran	98.83
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	98.83
3a98_A	184	DOCK2, dedicator of cytokinesis protein 2; protein	98.82
2pz1_A	466	RHO guanine nucleotide exchange factor 4; helical	98.78
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	98.74
4d8k_A	175	Tyrosine-protein kinase LCK; protein kinases, SH2	98.71
2de0_X	526	Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran	98.69
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	98.68
3haj_A	486	Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR,	98.67
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	98.66
1ri9_A	102	FYN-binding protein; SH3-like, helically extended,	98.6
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	98.56
1kjw_A	295	Postsynaptic density protein 95; protein-protein i	98.55
1ug1_A	92	KIAA1010 protein; structural genomics, SH3 domain,	98.55
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	98.53
2gtj_A	96	FYN-binding protein; SH3, redox, signaling protein	98.46
1u3o_A	82	Huntingtin-associated protein-interacting protein;	98.46
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	98.41
1ug1_A	92	KIAA1010 protein; structural genomics, SH3 domain,	98.41
3pvl_A	655	Myosin VIIA isoform 1; protein complex, novel fold	98.41
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	98.37
3haj_A	486	Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR,	98.35
1ri9_A	102	FYN-binding protein; SH3-like, helically extended,	98.32
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	98.16
3pvl_A	655	Myosin VIIA isoform 1; protein complex, novel fold	98.16
1kjw_A	295	Postsynaptic density protein 95; protein-protein i	98.15
4dey_A	337	Voltage-dependent L-type calcium channel subunit;	98.15
4dey_A	337	Voltage-dependent L-type calcium channel subunit;	98.09
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	97.99
3tsz_A	391	Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffol	97.86
2gtj_A	96	FYN-binding protein; SH3, redox, signaling protein	97.84
3kfv_A	308	Tight junction protein ZO-3; structural genomics c	97.82
2xkx_A	721	Disks large homolog 4; structural protein, scaffol	97.77
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	97.69
3shw_A	468	Tight junction protein ZO-1; PDZ-SH3-GUK supramodu	97.64
3pe0_A	283	Plectin; cytoskeleton, plakin, spectrin repeat, SH	97.44
3tvt_A	292	Disks large 1 tumor suppressor protein; DLG, SRC-h	97.42
3kfv_A	308	Tight junction protein ZO-3; structural genomics c	97.3
2xkx_A	721	Disks large homolog 4; structural protein, scaffol	97.27
3tsz_A	391	Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffol	97.26
3tvt_A	292	Disks large 1 tumor suppressor protein; DLG, SRC-h	97.19
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	97.15
3shw_A	468	Tight junction protein ZO-1; PDZ-SH3-GUK supramodu	96.87
3npf_A	306	Putative dipeptidyl-peptidase VI; structural genom	96.65
3pe0_A	283	Plectin; cytoskeleton, plakin, spectrin repeat, SH	96.47
3r6n_A	450	Desmoplakin; spectrin repeat, SH3 domain, cell adh	96.38
2krs_A	74	Probable enterotoxin; all beta, SH3, ENTD, CPF_058	96.32
2kq8_A	70	Cell WALL hydrolase; GFT protein structure, NESG,	96.26
2kt8_A	76	Probable surface protein; SH3 family, structural g	96.07
3h41_A	311	NLP/P60 family protein; NLPC/P60 family protein, s	94.83
3npf_A	306	Putative dipeptidyl-peptidase VI; structural genom	94.03
2kt8_A	76	Probable surface protein; SH3 family, structural g	93.67
2krs_A	74	Probable enterotoxin; all beta, SH3, ENTD, CPF_058	93.62
3r6n_A	450	Desmoplakin; spectrin repeat, SH3 domain, cell adh	92.97
2kq8_A	70	Cell WALL hydrolase; GFT protein structure, NESG,	92.84
3h41_A	311	NLP/P60 family protein; NLPC/P60 family protein, s	90.37
1wfw_A	74	Kalirin-9A; SH3 domain, neuron-specific GDP/GTP ex	86.11

>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B

Probab=99.92  E-value=9.5e-25  Score=191.95  Aligned_cols=129  Identities=25%  Similarity=0.504  Sum_probs=103.6

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCCCCCCCCCCCCCCCCcccccc
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVPGTELPGDKHHLELI  248 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~~~~~~~~~~~~~~~~~~~~~  248 (336)
                      ...++|+|+|.+...+||+|.+||+|.|+  ...++|||.|+.+|+.||||++||+.+.......+.  .+ .......+
T Consensus        11 ~~~~~al~dy~~~~~~eLs~~~Gd~i~vl--~~~~~gWw~g~~~g~~G~~P~~yv~~~~~~~~~~~~--~p-~~~~~~~~   85 (193)
T 1ng2_A           11 LQTYRAIADYEKTSGSEMALSTGDVVEVV--EKSESGWWFCQMKAKRGWIPASFLEPLDSPDETEDP--EP-NYAGEPYV   85 (193)
T ss_dssp             CEEEECSSCBCCSSTTCCCBCTTCEEEEE--ECCTTSCCEEEECCCCCCCCGGGCCCSSCSSCSCCC--CC-CTTCEEEE
T ss_pred             CcEEEEcCCcCCCCCCcCCCCCCCEEEEE--EecCCCeEEEEECCeeeEechheEEeeccccccchh--hc-cccceeee
Confidence            56799999999999999999999999996  446789999999999999999999988754322111  01 11122345


Q ss_pred             ccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCC
Q psy7077         249 AEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       249 a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~  319 (336)
                      +.++|.+...++                 |+|.+||+|.|+++.+++||.|+.+|++||||+|||+.++..
T Consensus        86 al~dy~a~~~~e-----------------Ls~~~Gd~i~vl~~~~~gWw~g~~~g~~G~~P~~yv~~~~~~  139 (193)
T 1ng2_A           86 AIKAYTAVEGDE-----------------VSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQKSGQD  139 (193)
T ss_dssp             ESSCBCCCSTTB-----------------CCBCTTCEEEEEECCTTSEEEEEETTEEEEEEGGGEEETTSC
T ss_pred             eccccCCCCCCc-----------------ccccCCCEEEEEEecCCCeEEEEECCCEEEEehHHeEECCCC
Confidence            667776665555                 459999999999999999999999999999999999998753

>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A

Probab=99.91  E-value=1.3e-23  Score=197.15  Aligned_cols=151  Identities=23%  Similarity=0.360  Sum_probs=99.5

Q ss_pred             cceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEE-eeCceeeecccceeecCCCCCCCCCC---C----CC
Q psy7077         168 EYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE-LRGQTGWFPESYVEPCDETGEVVPGT---E----LP  239 (336)
Q Consensus       168 ~~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~-~~g~~G~fP~~yve~~~~~~~~~~~~---~----~~  239 (336)
                      ....++|+|+|.++.++||+|++||+|.|+  ...+++||.|+ .+|+.||||++||+.+..........   .    ..
T Consensus       133 ~~~~~~alydy~~~~~~eLsf~~Gd~i~v~--~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~~~~~~~~~~~~g~~~~~~~  210 (304)
T 2eyz_A          133 EAEYVRALFDFNGNDEEDLPFKKGDILRIR--DKPEEQWWNAEDSEGKRGMIPVPYVEKYRPASASVSALIGGNQEGSHP  210 (304)
T ss_dssp             CCCEEEECSCCCCSCSSSCCCCTTCEEEEE--ECCSSSEEEEECTTSCEEEEESTTEEECCCSTTSCCCCCCCSSCCSCC
T ss_pred             cceeEEEEeeecCCCCCcCcccCCCEEEEE--EecCCCcEEEEeCCCceeccchhccccccCCCcccccccCCCcCCCCC
Confidence            346799999999999999999999999996  45778999999 68999999999999987543221000   0    00


Q ss_pred             CCC-ccccccccCCCCcC-----CCC-CCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCC
Q psy7077         240 GDK-HHLELIAEVPENIS-----DSG-GSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESY  312 (336)
Q Consensus       240 ~~~-~~~~~~a~~~~~~~-----~~~-~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsny  312 (336)
                      .+. .........+....     ... ....+.+++........+|+|++||+|.|+++.++|||.|+++|++||||+||
T Consensus       211 ~~~~~~~p~~~~~p~~~~~~p~~~~~~~~~~al~d~~~~a~~~~eL~~~~Gd~i~v~~~~~~gWw~g~~~g~~G~fP~~y  290 (304)
T 2eyz_A          211 QPLGGPEPGPYAQPSVNTPLPNLQNGPIYARVIQKRVPNAYDKTALALEVGELVKVTKINVSGQWEGECNGKRGHFPFTH  290 (304)
T ss_dssp             CSCSCCCSBTTBCSSSSCSSSCCSSCCCCSCCSSCBCCCTTCSSCCCBCTTSCCEEEEECTTSCEEEEETTEEEECCCTT
T ss_pred             CCCCCCCcccccccccccccCCCCCCCEEEEEeeeecCCCCCCCeecccCCCEEEEEEecCCCeEEEEECCceEEechHH
Confidence            000 00000000000000     000 00011111110011234589999999999999999999999999999999999


Q ss_pred             eeecCCCC
Q psy7077         313 VEPCDETG  320 (336)
Q Consensus       313 V~~i~~~~  320 (336)
                      |+.++...
T Consensus       291 v~~~~~~~  298 (304)
T 2eyz_A          291 VRLLDQQN  298 (304)
T ss_dssp             SCCCSSCC
T ss_pred             EEECCCCC
Confidence            99997643

>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B

Probab=99.89  E-value=3.2e-23  Score=182.17  Aligned_cols=109  Identities=24%  Similarity=0.478  Sum_probs=99.1

Q ss_pred             cEEEEecccCCCCCCCccccCCCEEEEEee-cCCceecccCCCcccccccc-----------------cceeeeeeeecc
Q psy7077         118 KYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTARFRGVS-----------------EYRRYRAIYEFV  179 (336)
Q Consensus       118 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~Ww~g~~~~~~g~~p~~~-----------------~~~~~~al~df~  179 (336)
                      ..|+|+|||.++.++||+|.+||+|.|+++ +++||.|+.+|+.|+||.+.                 ....++|+|+|.
T Consensus        12 ~~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~~~gWw~g~~~g~~G~~P~~yv~~~~~~~~~~~~~p~~~~~~~~al~dy~   91 (193)
T 1ng2_A           12 QTYRAIADYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDETEDPEPNYAGEPYVAIKAYT   91 (193)
T ss_dssp             EEEECSSCBCCSSTTCCCBCTTCEEEEEECCTTSCCEEEECCCCCCCCGGGCCCSSCSSCSCCCCCCTTCEEEEESSCBC
T ss_pred             cEEEEcCCcCCCCCCcCCCCCCCEEEEEEecCCCeEEEEECCeeeEechheEEeeccccccchhhccccceeeeeccccC
Confidence            379999999999999999999999999998 89999999999999999751                 125689999999


Q ss_pred             cCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCC
Q psy7077         180 SRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       180 a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~  228 (336)
                      ++..+||+|.+||+|.|+  ...++|||.|+.+|+.||||++||+.+..
T Consensus        92 a~~~~eLs~~~Gd~i~vl--~~~~~gWw~g~~~g~~G~~P~~yv~~~~~  138 (193)
T 1ng2_A           92 AVEGDEVSLLEGEAVEVI--HKLLDGWWVIRKDDVTGYFPSMYLQKSGQ  138 (193)
T ss_dssp             CCSTTBCCBCTTCEEEEE--ECCTTSEEEEEETTEEEEEEGGGEEETTS
T ss_pred             CCCCCcccccCCCEEEEE--EecCCCeEEEEECCCEEEEehHHeEECCC
Confidence            999999999999999996  44688999999999999999999999875

>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A

Probab=99.88  E-value=1.5e-22  Score=180.68  Aligned_cols=147  Identities=27%  Similarity=0.432  Sum_probs=91.6

Q ss_pred             eeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCCCCC---C------------CCC
Q psy7077         171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGE---V------------VPG  235 (336)
Q Consensus       171 ~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~~~~---~------------~~~  235 (336)
                      +++|+|+|.++.++||+|++||+|.|+.. ..+++||.|+.+|+.||||++||+.....--   .            .+.
T Consensus         2 ~~~al~~~~~~~~~eLs~~~Gd~i~v~~~-~~~~~W~~~~~~g~~G~~P~~yv~~~~~~w~~g~isr~~ae~lL~~~~~~   80 (217)
T 1gri_A            2 EAIAKYDFKATADDELSFKRGDILKVLNE-ECDQNWYKAELNGKDGFIPKNYIEMKPHPWFFGKIPRAKAEEMLSKQRHD   80 (217)
T ss_dssp             EEEECSCBCCCSSSCCCBCTTCEEEC-------CCEEEEESSSCEEEEEGGGEECCCCSSBCTTCCHHHHHHHHHTCSST
T ss_pred             EEEEeeccCCcCCCcCCCCCCCEEEEEec-cCCCCeEeeccCCccceECCcccccccchhhcccCCHHHHHHHHhccCCC
Confidence            58999999999999999999999999642 3367899999999999999999997653200   0            000


Q ss_pred             C-------CCCCCCcccc-----cccc---------------------------CCC-CcCCCC------------CCCc
Q psy7077         236 T-------ELPGDKHHLE-----LIAE---------------------------VPE-NISDSG------------GSGI  263 (336)
Q Consensus       236 ~-------~~~~~~~~~~-----~~a~---------------------------~~~-~~~~~~------------~l~~  263 (336)
                      .       ...+...++.     .+..                           +.. ......            ....
T Consensus        81 G~fLvR~S~~~~g~~~LSv~~~~~v~h~~I~~~~~g~~~~~~~~f~sl~eLv~~~~~~~~~~~~~~~l~~~~~~~~~~~~  160 (217)
T 1gri_A           81 GAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIEQVPQQPTY  160 (217)
T ss_dssp             TCEEEEECSSSTTCEEEEEEETTEEEEEEEEECSSSCEESSSCEESSHHHHHHHHHHSCSSSSTTCCCCBCCCCCCCCCE
T ss_pred             ceEEEEccCCCCCCEEEEEEECCEEEEEEEEEcCCCCEEEeeeEcCCHHHHHHhhhccccccccceeecccccCCCCceE
Confidence            0       0000000000     0000                           000 000000            0000


Q ss_pred             cccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCC
Q psy7077         264 AVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  318 (336)
Q Consensus       264 ~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~  318 (336)
                      ...-+........+|+|++||+|.|+++.+++||.|+.+|++||||+|||+.++.
T Consensus       161 ~~al~~y~~~~~~eL~~~~Gd~i~v~~~~~~~W~~g~~~g~~G~~P~~yv~~~~~  215 (217)
T 1gri_A          161 VQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGACHGQTGMFPRNYVTPVNR  215 (217)
T ss_dssp             EEESSCCCCSSTTBCCCCTTCEEEEEECCSSSEEEEECSSCEEEEEGGGEEEECC
T ss_pred             EEecCCccCCCCCcCCCCCCCEEEEEEeCCCCeEEEEECCeEEEEeHHHeEECCC
Confidence            0001111112223599999999999999999999999999999999999999864

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans}

Probab=99.87  E-value=3.8e-23  Score=194.31  Aligned_cols=148  Identities=16%  Similarity=0.219  Sum_probs=50.4

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe-eCceeeecccceeecC---CCCCCCCCC---CCCC-
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL-RGQTGWFPESYVEPCD---ETGEVVPGT---ELPG-  240 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~-~g~~G~fP~~yve~~~---~~~~~~~~~---~~~~-  240 (336)
                      ...++|+|+|.++..+||+|++||+|.|+  ...+++||.|++ +|+.||||++||+...   .........   ..+. 
T Consensus       147 ~~~~~al~dy~~~~~~eLsf~~Gd~i~v~--~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~~~~~~~~~~~~~~ss~~ss~  224 (308)
T 3qwy_A          147 IEVVVGTFKFTGERETDLPFEQGERLEIL--SKTNQDWWEARNALGTTGLVPANYVQIQMEFHNDRTSKGASQSSIGSSG  224 (308)
T ss_dssp             CEEEEESSCBCCSSTTBCCBCTTCEEEEE--ECCSSSEEEEECTTSCEEEEEGGGEEEC---------------------
T ss_pred             ceeEEEeceEcCCCCCcCcCCCCCEEEEE--EcCCCCeEEEEeCCCCeeEecccccccccccccCccccccccCCCCCcc
Confidence            45799999999999999999999999996  456889999996 8999999999999443   211100000   0000 


Q ss_pred             ---CCccccccccCCCCcCCC-CCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeec
Q psy7077         241 ---DKHHLELIAEVPENISDS-GGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPC  316 (336)
Q Consensus       241 ---~~~~~~~~a~~~~~~~~~-~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i  316 (336)
                         .................. .....+.+++........+|+|++||+|.|+++.+++||.|+++|++||||+|||+.+
T Consensus       225 s~p~p~s~ps~~sp~p~~~~~~~~~a~alyd~~~~~~~~~ELs~~~Gd~i~v~~~~~~~ww~g~~~g~~G~fP~~yv~~~  304 (308)
T 3qwy_A          225 GGAERFSSASTSSDNIELQPRLPAKAKVTFDRVPNAYDPTQLRVKKGQTVLVTQKMSNGMYKAELDGQIGSVPHTYLRFT  304 (308)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ccccccccccccCcccccccccccccccccccccccCCcccceeCCCCEEEEEEEcCCCcEEEEECCeeEEechHHeEEe
Confidence               000000000000000000 0000000111000111245889999999999998888889999999999999999998


Q ss_pred             CC
Q psy7077         317 DE  318 (336)
Q Consensus       317 ~~  318 (336)
                      +.
T Consensus       305 ~~  306 (308)
T 3qwy_A          305 AV  306 (308)
T ss_dssp             --
T ss_pred             cC
Confidence            64

>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A*

Probab=99.77  E-value=1.8e-23  Score=196.12  Aligned_cols=149  Identities=20%  Similarity=0.337  Sum_probs=97.4

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe-eCceeeecccceeecCCCCCCCCCCCC-----CCCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL-RGQTGWFPESYVEPCDETGEVVPGTEL-----PGDK  242 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~-~g~~G~fP~~yve~~~~~~~~~~~~~~-----~~~~  242 (336)
                      ...++|+|+|.++..+||+|++||+|.|+  .+.+++||.|+. +|+.||||++||+.+............     ....
T Consensus       125 ~~~~~alydy~~~~~~eLsf~~Gd~i~v~--~~~~~~Ww~~~~~~g~~G~~P~~yv~~~~~~~~~~~~~s~~~~~~~~p~  202 (303)
T 2lqn_A          125 LEYVRTLYDFPGNDAEDLPFKKGEILVII--EKPEEQWWSARNKDGRVGMIPVPYVEKLVRSSPHGKHGNRNSNSYGIPE  202 (303)
Confidence            46799999999999999999999999996  446789999994 899999999999998754321110000     0000


Q ss_pred             cc-----ccccccCCCCcCC-------------CCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCc
Q psy7077         243 HH-----LELIAEVPENISD-------------SGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQ  304 (336)
Q Consensus       243 ~~-----~~~~a~~~~~~~~-------------~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~  304 (336)
                      ..     .......+.....             ......+.+++........+|+|++||+|.|+++.++|||.|+++|+
T Consensus       203 ~s~~~~~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~alydy~~~~~~~~eLs~~~Gd~i~v~~~~~~gWw~g~~~g~  282 (303)
T 2lqn_A          203 PAHAYAQPQTTTPLPAVSGSPGAAITPLPSTQNGPVFAKAIQKRVPCAYDKTALALEVGDIVKVTRMNINGQWEGEVNGR  282 (303)
Confidence            00     0000000000000             00000000111000111235889999999999999999999999999


Q ss_pred             eeEeeCCCeeecCCC
Q psy7077         305 TGWFPESYVEPCDET  319 (336)
Q Consensus       305 ~G~fPsnyV~~i~~~  319 (336)
                      +||||+|||+.+++.
T Consensus       283 ~G~fP~~yv~~~~~~  297 (303)
T 2lqn_A          283 KGLFPFTHVKIFDPQ  297 (303)
Confidence            999999999999754

>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A

Probab=99.85  E-value=1.8e-21  Score=182.50  Aligned_cols=110  Identities=22%  Similarity=0.428  Sum_probs=96.9

Q ss_pred             cEEEEecccCCCCCCCccccCCCEEEEEee-cCCceecc-cCCCcccccccc----------------------------
Q psy7077         118 KYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGT-IGDRTARFRGVS----------------------------  167 (336)
Q Consensus       118 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~Ww~g~-~~~~~g~~p~~~----------------------------  167 (336)
                      .+++|+|||.++.++||+|++||+|.|+++ +++||.|+ .+|+.|+||.+.                            
T Consensus       135 ~~~~alydy~~~~~~eLsf~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~~~~~~~~~~~~g~~~~~~~~~~~  214 (304)
T 2eyz_A          135 EYVRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEKYRPASASVSALIGGNQEGSHPQPLG  214 (304)
T ss_dssp             CEEEECSCCCCSCSSSCCCCTTCEEEEEECCSSSEEEEECTTSCEEEEESTTEEECCCSTTSCCCCCCCSSCCSCCCSCS
T ss_pred             eeEEEEeeecCCCCCcCcccCCCEEEEEEecCCCcEEEEeCCCceeccchhccccccCCCcccccccCCCcCCCCCCCCC
Confidence            489999999999999999999999999998 89999999 678999998630                            


Q ss_pred             ---------------------cceeeeeeeecc--cCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeeccccee
Q psy7077         168 ---------------------EYRRYRAIYEFV--SRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE  224 (336)
Q Consensus       168 ---------------------~~~~~~al~df~--a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve  224 (336)
                                           ....++|+|+|.  +..++||+|++||+|.|+  ...++|||.|+++|+.||||+|||+
T Consensus       215 ~~~p~~~~~p~~~~~~p~~~~~~~~~~al~d~~~~a~~~~eL~~~~Gd~i~v~--~~~~~gWw~g~~~g~~G~fP~~yv~  292 (304)
T 2eyz_A          215 GPEPGPYAQPSVNTPLPNLQNGPIYARVIQKRVPNAYDKTALALEVGELVKVT--KINVSGQWEGECNGKRGHFPFTHVR  292 (304)
T ss_dssp             CCCSBTTBCSSSSCSSSCCSSCCCCSCCSSCBCCCTTCSSCCCBCTTSCCEEE--EECTTSCEEEEETTEEEECCCTTSC
T ss_pred             CCCcccccccccccccCCCCCCCEEEEEeeeecCCCCCCCeecccCCCEEEEE--EecCCCeEEEEECCceEEechHHEE
Confidence                                 012578999999  779999999999999996  4477899999999999999999999


Q ss_pred             ecCCC
Q psy7077         225 PCDET  229 (336)
Q Consensus       225 ~~~~~  229 (336)
                      .+...
T Consensus       293 ~~~~~  297 (304)
T 2eyz_A          293 LLDQQ  297 (304)
T ss_dssp             CCSSC
T ss_pred             ECCCC
Confidence            98753

>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A

Probab=99.84  E-value=4.3e-21  Score=171.18  Aligned_cols=108  Identities=28%  Similarity=0.637  Sum_probs=92.0

Q ss_pred             EEEEecccCCCCCCCccccCCCEEEEEee--cCCceecccCCCcccccccc-----------------------------
Q psy7077         119 YYIAAYPYDSTEPGDLTFNQDEVIYVTKK--ENDWWTGTIGDRTARFRGVS-----------------------------  167 (336)
Q Consensus       119 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~--~~~Ww~g~~~~~~g~~p~~~-----------------------------  167 (336)
                      .++|+|||.++.++||+|++||+|.|+++  +++||.|+.+|+.|+||.+.                             
T Consensus         2 ~~~al~~~~~~~~~eLs~~~Gd~i~v~~~~~~~~W~~~~~~g~~G~~P~~yv~~~~~~w~~g~isr~~ae~lL~~~~~~G   81 (217)
T 1gri_A            2 EAIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEMKPHPWFFGKIPRAKAEEMLSKQRHDG   81 (217)
T ss_dssp             EEEECSCBCCCSSSCCCBCTTCEEEC------CCEEEEESSSCEEEEEGGGEECCCCSSBCTTCCHHHHHHHHHTCSSTT
T ss_pred             EEEEeeccCCcCCCcCCCCCCCEEEEEeccCCCCeEeeccCCccceECCcccccccchhhcccCCHHHHHHHHhccCCCc
Confidence            48999999999999999999999999987  67899999999999887530                             


Q ss_pred             ---------------------------------------------------------------------------cceee
Q psy7077         168 ---------------------------------------------------------------------------EYRRY  172 (336)
Q Consensus       168 ---------------------------------------------------------------------------~~~~~  172 (336)
                                                                                                 ....+
T Consensus        82 ~fLvR~S~~~~g~~~LSv~~~~~v~h~~I~~~~~g~~~~~~~~f~sl~eLv~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  161 (217)
T 1gri_A           82 AFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIEQVPQQPTYV  161 (217)
T ss_dssp             CEEEEECSSSTTCEEEEEEETTEEEEEEEEECSSSCEESSSCEESSHHHHHHHHHHSCSSSSTTCCCCBCCCCCCCCCEE
T ss_pred             eEEEEccCCCCCCEEEEEEECCEEEEEEEEEcCCCCEEEeeeEcCCHHHHHHhhhccccccccceeecccccCCCCceEE
Confidence                                                                                       01247


Q ss_pred             eeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCC
Q psy7077         173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       173 ~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~  228 (336)
                      +|+|||.++.++||+|++||+|.|+  ...++|||.|+++|+.||||++||+.++.
T Consensus       162 ~al~~y~~~~~~eL~~~~Gd~i~v~--~~~~~~W~~g~~~g~~G~~P~~yv~~~~~  215 (217)
T 1gri_A          162 QALFDFDPQEDGELGFRRGDFIHVM--DNSDPNWWKGACHGQTGMFPRNYVTPVNR  215 (217)
T ss_dssp             EESSCCCCSSTTBCCCCTTCEEEEE--ECCSSSEEEEECSSCEEEEEGGGEEEECC
T ss_pred             EecCCccCCCCCcCCCCCCCEEEEE--EeCCCCeEEEEECCeEEEEeHHHeEECCC
Confidence            8999999999999999999999996  44778999999999999999999999863

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans}

Probab=99.82  E-value=3e-21  Score=181.40  Aligned_cols=108  Identities=21%  Similarity=0.399  Sum_probs=45.3

Q ss_pred             EEEEecccCCCCCCCccccCCCEEEEEee-cCCceeccc-CCCccccccccc----------------------------
Q psy7077         119 YYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTI-GDRTARFRGVSE----------------------------  168 (336)
Q Consensus       119 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~Ww~g~~-~~~~g~~p~~~~----------------------------  168 (336)
                      .++|+|||.++.++||+|++||+|.|+++ +++||.|++ +|+.|+||.+..                            
T Consensus       149 ~~~al~dy~~~~~~eLsf~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~~~~~~~~~~~~~~ss~~ss~s~p~  228 (308)
T 3qwy_A          149 VVVGTFKFTGERETDLPFEQGERLEILSKTNQDWWEARNALGTTGLVPANYVQIQMEFHNDRTSKGASQSSIGSSGGGAE  228 (308)
T ss_dssp             EEEESSCBCCSSTTBCCBCTTCEEEEEECCSSSEEEEECTTSCEEEEEGGGEEEC-------------------------
T ss_pred             eEEEeceEcCCCCCcCcCCCCCEEEEEEcCCCCeEEEEeCCCCeeEecccccccccccccCccccccccCCCCCcccccc
Confidence            79999999999999999999999999998 899999996 899999986410                            


Q ss_pred             ------------------ceeeeeeeecc--cCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCC
Q psy7077         169 ------------------YRRYRAIYEFV--SRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ------------------~~~~~al~df~--a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~  228 (336)
                                        ...++|+|+|.  +..++||+|++||+|.|+  ...++|||.|+++|+.||||+|||+.++.
T Consensus       229 p~s~ps~~sp~p~~~~~~~~~a~alyd~~~~~~~~~ELs~~~Gd~i~v~--~~~~~~ww~g~~~g~~G~fP~~yv~~~~~  306 (308)
T 3qwy_A          229 RFSSASTSSDNIELQPRLPAKAKVTFDRVPNAYDPTQLRVKKGQTVLVT--QKMSNGMYKAELDGQIGSVPHTYLRFTAV  306 (308)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ccccccccCcccccccccccccccccccccccCCcccceeCCCCEEEEE--EEcCCCcEEEEECCeeEEechHHeEEecC
Confidence                              23578999994  455699999999999996  44678999999999999999999999864

>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A*

Probab=99.69  E-value=2.1e-21  Score=182.03  Aligned_cols=110  Identities=26%  Similarity=0.460  Sum_probs=95.6

Q ss_pred             cEEEEecccCCCCCCCccccCCCEEEEEee-cCCceeccc-CCCccccccc--------c--------------------
Q psy7077         118 KYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTI-GDRTARFRGV--------S--------------------  167 (336)
Q Consensus       118 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~Ww~g~~-~~~~g~~p~~--------~--------------------  167 (336)
                      .+|+|+|||.++.++||+|++||+|.|+++ +++||.|++ +|+.|+||.+        .                    
T Consensus       126 ~~~~alydy~~~~~~eLsf~~Gd~i~v~~~~~~~Ww~~~~~~g~~G~~P~~yv~~~~~~~~~~~~~s~~~~~~~~p~~s~  205 (303)
T 2lqn_A          126 EYVRTLYDFPGNDAEDLPFKKGEILVIIEKPEEQWWSARNKDGRVGMIPVPYVEKLVRSSPHGKHGNRNSNSYGIPEPAH  205 (303)
Confidence            379999999999999999999999999998 899999995 7899999853        0                    


Q ss_pred             ------------------------------cceeeeeeeecccC--CCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCce
Q psy7077         168 ------------------------------EYRRYRAIYEFVSR--NGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQT  215 (336)
Q Consensus       168 ------------------------------~~~~~~al~df~a~--~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~  215 (336)
                                                    ....++|+|+|.++  +.+||+|++||+|.|+  ...++|||.|+++|+.
T Consensus       206 ~~~~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~alydy~~~~~~~~eLs~~~Gd~i~v~--~~~~~gWw~g~~~g~~  283 (303)
T 2lqn_A          206 AYAQPQTTTPLPAVSGSPGAAITPLPSTQNGPVFAKAIQKRVPCAYDKTALALEVGDIVKVT--RMNINGQWEGEVNGRK  283 (303)
Confidence                                          01358999999855  4779999999999996  4578899999999999


Q ss_pred             eeecccceeecCCC
Q psy7077         216 GWFPESYVEPCDET  229 (336)
Q Consensus       216 G~fP~~yve~~~~~  229 (336)
                      ||||++||+.+...
T Consensus       284 G~fP~~yv~~~~~~  297 (303)
T 2lqn_A          284 GLFPFTHVKIFDPQ  297 (303)
Confidence            99999999998743

>2dyb_A Neutrophil cytosol factor 4; P40(PHOX), NADPH oxidase, oxidoreductase; HET: CAF; 3.15A {Homo sapiens}

Probab=99.77  E-value=2.8e-20  Score=177.11  Aligned_cols=145  Identities=21%  Similarity=0.308  Sum_probs=91.7

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCCCCCCCCCCCCC----CCCcc
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVPGTELP----GDKHH  244 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~~~~~~~~~~~~----~~~~~  244 (336)
                      ...++|+|+|.++.++||+|++||+|.|+.  ..++|||.|+.+|+.||||++||+.+.+...........    ....+
T Consensus       174 ~~~~~alydy~~~~~~eLsf~~Gd~i~v~~--~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~~~~~~~~~~~~~~~~~~~~  251 (341)
T 2dyb_A          174 APRAEALFDFTGNSKLELNFKAGDVIFLLS--RINKDWLEGTVRGATGIFPLSFVKILKDFPEEDDPTNWLRCYYYEDTI  251 (341)
T ss_dssp             CCEEEESSCBCCSSSSBCCBCTTCEEEEEE--ECSSSEEEEEETTEEEEEEGGGEEEEECCCCTTCCCEEEEEEEECSSC
T ss_pred             CcEEEEEEeeCCCCCCcCCccCCCEEEEEE--ecCCCEEEEEECCcEEEechHHeEEcCCCCccccccccccccccCCCC
Confidence            467999999999999999999999999964  477999999999999999999999986543221100000    00000


Q ss_pred             cccccc-CCCCcCCCCCCCccccCCCCCC----CCCCCCCC--CCCCEEEEEeecCCCeEEEEeCCc---eeEeeCC-Ce
Q psy7077         245 LELIAE-VPENISDSGGSGIAVEEGPGIP----ADIPSPIM--GLGTVVPVKQNAEPGWLAGELRGQ---TGWFPES-YV  313 (336)
Q Consensus       245 ~~~~a~-~~~~~~~~~~l~~~~~~~~~~~----~~~~~Lsf--~~Gd~V~V~~~~~~~W~~g~~~G~---~G~fPsn-yV  313 (336)
                      ...... .....   .........+..+.    ....+|+|  ++||+|.|+++.|+|||.|+++|+   +|+||++ ||
T Consensus       252 ~~~~~~~~~~~~---~~~~~~~a~yd~~~~~~~~~e~eL~~~~~~GD~I~v~~~~d~gWw~Ge~~g~~G~~glfP~~~~v  328 (341)
T 2dyb_A          252 STIKDIAVEEDL---SSTPLLKDLLELTRREFQREDIALNYRDAEGDLVRLLSDEDVALMVRQARGLPSQKRLFPWKLHI  328 (341)
T ss_dssp             EEEEEEEECSCT---TCCCCHHHHHHHHHHHHTCSCEEEEEECSSSCEEECCSHHHHHHHHHHHTTSCCBTTBCSSCEEE
T ss_pred             cccccccccccc---CCCcchhhhhhhhhhhcCCCcccccCCCCCCCEEEEeeecCCCEeEEEECCCCCCCceecceeEE
Confidence            000000 00000   00000000000000    12223555  899999999999999999987655   4599999 88


Q ss_pred             eecCC
Q psy7077         314 EPCDE  318 (336)
Q Consensus       314 ~~i~~  318 (336)
                      +.+++
T Consensus       329 ~~~~~  333 (341)
T 2dyb_A          329 TQKDN  333 (341)
T ss_dssp             EECC-
T ss_pred             EecCC
Confidence            88764

>1udl_A Intersectin 2, KIAA1256; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.67  E-value=9.4e-17  Score=125.53  Aligned_cols=89  Identities=27%  Similarity=0.499  Sum_probs=67.8

Q ss_pred             eCceeeecccceeecCCCCCCCCCCCCCCCCccccccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEee
Q psy7077         212 RGQTGWFPESYVEPCDETGEVVPGTELPGDKHHLELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQN  291 (336)
Q Consensus       212 ~g~~G~fP~~yve~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~  291 (336)
                      +|+.||||++||+.+.+......+    ........++.+++.+...++                 |+|++||+|.|+++
T Consensus         6 ~g~~G~fP~~~v~~~~~~~~~~~p----~~~~~~~~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~   64 (98)
T 1udl_A            6 SGQKGWFPASHVKLLGPSSERATP----AFHPVCQVIAMYDYAANNEDE-----------------LSFSKGQLINVMNK   64 (98)
T ss_dssp             SSCCSSCCCCCCCCCSCCCCCCCS----CCCCSEEEEESSCCCCSSTTS-----------------CCCCTTCEEEECBC
T ss_pred             CCCEeEEEhhhEEEcCCcccccCC----CCCCceEEEECCCCCCCCCCc-----------------cCCcCCCEEEEEEe
Confidence            478999999999988754322211    112234456677777666555                 45999999999999


Q ss_pred             cCCCeEEEEeCCceeEeeCCCeeecCCCCC
Q psy7077         292 AEPGWLAGELRGQTGWFPESYVEPCDETGE  321 (336)
Q Consensus       292 ~~~~W~~g~~~G~~G~fPsnyV~~i~~~~~  321 (336)
                      .+++||.|+.+|++||||+|||+.+.+...
T Consensus        65 ~~~~Ww~g~~~g~~G~~P~~yv~~~~~~~~   94 (98)
T 1udl_A           65 DDPDWWQGEINGVTGLFPSNYVKMTTDSSG   94 (98)
T ss_dssp             CSSSEEBCBSSSCBCCEETTSEEECCCCSS
T ss_pred             cCCCEEEEEECCcEEEEehHHeEEcCCCCC
Confidence            999999999999999999999999976543

>2dyb_A Neutrophil cytosol factor 4; P40(PHOX), NADPH oxidase, oxidoreductase; HET: CAF; 3.15A {Homo sapiens}

Probab=99.65  E-value=5e-18  Score=161.59  Aligned_cols=110  Identities=19%  Similarity=0.376  Sum_probs=87.8

Q ss_pred             ccEEEEecccCCCCCCCccccCCCEEEEEee-cCCceecccCCCcccccccc-----------c----------------
Q psy7077         117 DKYYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTARFRGVS-----------E----------------  168 (336)
Q Consensus       117 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~Ww~g~~~~~~g~~p~~~-----------~----------------  168 (336)
                      ...++|+|||.++.++||+|++||+|.|+++ +++||.|+.+|+.|+||.+.           .                
T Consensus       174 ~~~~~alydy~~~~~~eLsf~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (341)
T 2dyb_A          174 APRAEALFDFTGNSKLELNFKAGDVIFLLSRINKDWLEGTVRGATGIFPLSFVKILKDFPEEDDPTNWLRCYYYEDTIST  253 (341)
T ss_dssp             CCEEEESSCBCCSSSSBCCBCTTCEEEEEEECSSSEEEEEETTEEEEEEGGGEEEEECCCCTTCCCEEEEEEEECSSCEE
T ss_pred             CcEEEEEEeeCCCCCCcCCccCCCEEEEEEecCCCEEEEEECCcEEEechHHeEEcCCCCccccccccccccccCCCCcc
Confidence            3479999999999999999999999999998 99999999999999998641           0                


Q ss_pred             ------------ceeeeeeeeccc----CCCCCCCC--CCCCEEEEeeeecCCCCeEEEEeeCc---eeeeccc-ceeec
Q psy7077         169 ------------YRRYRAIYEFVS----RNGDELSF--QPGDIIMVPVKQNAEPGWLAGELRGQ---TGWFPES-YVEPC  226 (336)
Q Consensus       169 ------------~~~~~al~df~a----~~~~eLs~--~~Gdii~v~~~~~~~~gW~~g~~~g~---~G~fP~~-yve~~  226 (336)
                                  ...++|+|+|.+    .+..+|+|  .+||+|.|+  ...++|||.|+++|+   .|+||.+ ||+..
T Consensus       254 ~~~~~~~~~~~~~~~~~a~yd~~~~~~~~~e~eL~~~~~~GD~I~v~--~~~d~gWw~Ge~~g~~G~~glfP~~~~v~~~  331 (341)
T 2dyb_A          254 IKDIAVEEDLSSTPLLKDLLELTRREFQREDIALNYRDAEGDLVRLL--SDEDVALMVRQARGLPSQKRLFPWKLHITQK  331 (341)
T ss_dssp             EEEEEECSCTTCCCCHHHHHHHHHHHHTCSCEEEEEECSSSCEEECC--SHHHHHHHHHHHTTSCCBTTBCSSCEEEEEC
T ss_pred             ccccccccccCCCcchhhhhhhhhhhcCCCcccccCCCCCCCEEEEe--eecCCCEeEEEECCCCCCCceecceeEEEec
Confidence                        011346777876    44555555  899999996  446889999997654   5599998 88776


Q ss_pred             CC
Q psy7077         227 DE  228 (336)
Q Consensus       227 ~~  228 (336)
                      ++
T Consensus       332 ~~  333 (341)
T 2dyb_A          332 DN  333 (341)
T ss_dssp             C-
T ss_pred             CC
Confidence            64

>2lx7_A GAS-7, growth arrest-specific protein 7; structural genomics, northeast structural genomics consortiu target HR8574A, PSI-biology; NMR {Homo sapiens}

Probab=99.61  E-value=6.6e-16  Score=109.55  Aligned_cols=56  Identities=38%  Similarity=0.772  Sum_probs=49.9

Q ss_pred             ceeeeeeeecccCCCCC-CCCCCCCEEEEeeeecCCCCeEEEEe-eCceeeecccceeec
Q psy7077         169 YRRYRAIYEFVSRNGDE-LSFQPGDIIMVPVKQNAEPGWLAGEL-RGQTGWFPESYVEPC  226 (336)
Q Consensus       169 ~~~~~al~df~a~~~~e-Ls~~~Gdii~v~~~~~~~~gW~~g~~-~g~~G~fP~~yve~~  226 (336)
                      ..+|+|+|||.++.++| |+|++||+|.|+  ++.++|||.|++ +|++||||+|||+.+
T Consensus         3 g~~~rAlydy~~~~~~e~Ls~~~Gd~i~v~--~~~~~~Ww~g~~~~G~~G~fP~nyVe~i   60 (60)
T 2lx7_A            3 GARCRTLYPFSGERHGQGLRFAAGELITLL--QVPDGGWWEGEKEDGLRGWFPASYVQLL   60 (60)
T ss_dssp             SCEEEESCCCCSCCCSSCCCCCTTCEEEBS--CCCTTSCEEEECTTSCEEEECGGGEEEC
T ss_pred             CCEEEECcccCCCCCCCCccCCCCCEEEEe--EecCCCeEEEEeCCCCEEEEcHHHEEEC
Confidence            46899999999998887 999999999996  457789999997 689999999999874

>2lj0_A Sorbin and SH3 domain-containing protein 1; R85FL, ponsin, CAP, signaling protein; NMR {Homo sapiens} PDB: 2lj1_A

Probab=99.56  E-value=4.7e-15  Score=106.97  Aligned_cols=57  Identities=37%  Similarity=0.759  Sum_probs=50.9

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe--eCceeeecccceeecC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPCD  227 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~--~g~~G~fP~~yve~~~  227 (336)
                      ...++|+|||.++.++||+|++||+|.|+  +..++|||.|++  +|+.||||+|||+++.
T Consensus         6 ~~~~~Alydy~a~~~~ELs~~~Gd~i~v~--~~~~~gWw~g~~~~~g~~G~~P~nyVe~l~   64 (65)
T 2lj0_A            6 LFSYQALYSYIPQNDDELELRDGDIVDVM--EKCDDGWFVGTSRRTKQFGTFPGNYVKPLY   64 (65)
T ss_dssp             SCEEEESSCBCCSSTTBCCBCTTCEEEEE--EECTTSEEEEEETTTCCEEEEETTSEEECC
T ss_pred             CEEEEEceeECCCCcCCcCCCCCCEEEEe--EeCCCCEEEEEECCCCCEEEEehhHeEEEe
Confidence            45789999999999999999999999996  457889999987  5899999999999863

>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens}

Probab=99.52  E-value=1.7e-14  Score=101.46  Aligned_cols=56  Identities=25%  Similarity=0.633  Sum_probs=51.1

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecC
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD  227 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~  227 (336)
                      .+++|+|+|.++.++||+|++||+|.|+  ...++|||.|+.+|+.||||++||+.+.
T Consensus         2 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~--~~~~~~Ww~g~~~g~~G~~P~~yv~~~~   57 (58)
T 2bz8_A            2 VEAIVEFDYQAQHDDELTISVGEIITNI--RKEDGGWWEGQINGRRGLFPDNFVREIK   57 (58)
T ss_dssp             CCEEESSCBCCCSTTBCCBCTTCEEEEE--ECCTTTEEEEEETTEEEEEEGGGEEECC
T ss_pred             EEEEECcccCCCCcCEeeECCCCEEEEE--EeCCCCEEEEEECCeEEEEehHHeEEcC
Confidence            3689999999999999999999999996  4467899999999999999999999875

>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens}

Probab=99.52  E-value=2e-14  Score=103.65  Aligned_cols=58  Identities=33%  Similarity=0.676  Sum_probs=52.3

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCCC
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  229 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~~  229 (336)
                      ..++|+|+|.++.++||+|++||+|.|+  ...++|||.|+.+|+.||||++||+.+...
T Consensus         2 ~~~~alydy~~~~~~eLs~~~Gd~i~v~--~~~~~~Ww~g~~~g~~G~fP~~yv~~~~~~   59 (65)
T 2nwm_A            2 KAARLKFDFQAQSPKELTLQKGDIVYIH--KEVDKNWLEGEHHGRLGIFPANYVEVLPLE   59 (65)
T ss_dssp             CEEEECSCBCCCSTTBCCBCTTCEEEEE--ECCTTTCEEEEETTEEEEECGGGEEECCCC
T ss_pred             cEEEEeeeECCCCcCccCCcCCCEEEEE--EecCCCEEEEEECCcEEEEehhhEEEcCCC
Confidence            3689999999999999999999999995  457789999999999999999999987743

>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR {Homo sapiens}

Probab=99.51  E-value=1e-14  Score=105.22  Aligned_cols=58  Identities=33%  Similarity=0.766  Sum_probs=52.5

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCCC
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  229 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~~  229 (336)
                      ..++|+|+|.++.++||+|++||+|.|+  ...++|||.|+.+|+.|+||++||+.+...
T Consensus         2 ~~~~Alydy~~~~~~eLs~~~Gd~i~v~--~~~~~gWw~g~~~g~~G~fP~~yv~~~~~~   59 (65)
T 2fei_A            2 RQCKVLFEYIPQNEDELELKVGDIIDIN--EEVEEGWWSGTLNNKLGLFPSNFVKELELE   59 (65)
T ss_dssp             CEEECSSCCCCCSTTBCCCCTTCEEECC--CCSSSSEEEEESSSCEEEEETTTSCBCCCC
T ss_pred             eEEEECccCCcCCcCccCCCCCCEEEEE--EecCCCEEEEEECCcEEEecHHHEEEcCCC
Confidence            4689999999999999999999999996  457889999999999999999999987644

>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A

Probab=99.51  E-value=3e-14  Score=104.01  Aligned_cols=60  Identities=32%  Similarity=0.665  Sum_probs=52.6

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCCC
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  229 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~~  229 (336)
                      ..++|+|+|.++.++||+|++||+|.|+.....++|||.|+.+|+.||||++||+.+...
T Consensus         3 ~~~~Alydy~a~~~~eLs~~~Gd~i~vl~~~~~~~gWw~g~~~g~~G~~P~~yV~~~~~~   62 (69)
T 2ydl_A            3 DYCKVIFPYEAQNDDELTIKEGDIVTLINKDCIDVGWWEGELNGRRGVFPDNFVKLLPPL   62 (69)
T ss_dssp             EEEEESSCBCCCSTTBCCBCTTCEEEEEESCCSSTTEEEEEETTEEEEEEGGGEEECCSC
T ss_pred             cEEEEcccCCCCCCCccccCCCCEEEEEEcCCCCCCEEEEEECCcEEEecHHHEEECCCC
Confidence            578999999999999999999999999643213789999999999999999999998743

>1x43_A Endophilin B1, SH3 domain GRB2-like protein B1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.50  E-value=4.8e-14  Score=106.15  Aligned_cols=63  Identities=30%  Similarity=0.519  Sum_probs=54.6

Q ss_pred             ccceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCCC
Q psy7077         167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  229 (336)
Q Consensus       167 ~~~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~~  229 (336)
                      .....++|+|+|.++..+||+|++||+|.|+.....+++||.|+.+|+.||||++||+.+...
T Consensus        15 ~~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~   77 (81)
T 1x43_A           15 SNNRKARVLYDYDAANSTELSLLADEVITVFSVVGMDSDWLMGERGNQKGKVPITYLELLNSG   77 (81)
T ss_dssp             CCCEEEEESSCCCCSSTTBCCCCTTCEEEEECCTTCCTTEEEEEETTEEEEEEGGGEEECCCC
T ss_pred             CCCeEEEEcccCCCCCCCcCCCCCCCEEEEEEcCCCCCCcEEEEECCCEEEEehHHEEECCCC
Confidence            445789999999999999999999999999642213689999999999999999999998743

>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A

Probab=99.50  E-value=2.7e-14  Score=101.17  Aligned_cols=56  Identities=36%  Similarity=0.689  Sum_probs=51.1

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeec
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC  226 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~  226 (336)
                      ...++|+|+|.++.++||+|++||+|.|+.  ..++|||.|+.+|+.||||++||+.+
T Consensus         4 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~--~~~~~W~~g~~~g~~G~~P~~yv~~l   59 (60)
T 1w70_A            4 HMRAEALFDFTGNSKLELNFKAGDVIFLLS--RINKDWLEGTVRGATGIFPLSFVKIL   59 (60)
T ss_dssp             SCEEEESSCBCCSSTTBCCBCTTCEEEEEE--ECSSSEEEEEETTEEEEEEGGGEEEC
T ss_pred             CcEEEECccCCcCCCCCccCCCCCEEEEEE--eCCCCeEEEEECCCEEEechHHEEEC
Confidence            357999999999999999999999999964  46789999999999999999999876

>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A

Probab=99.50  E-value=2.8e-14  Score=100.30  Aligned_cols=56  Identities=38%  Similarity=0.809  Sum_probs=51.0

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecC
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD  227 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~  227 (336)
                      ..++|+|+|.++.++||+|++||+|.|+  ...++|||.|+.+|+.||||++||+.++
T Consensus         2 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~--~~~~~~Ww~g~~~g~~G~~P~~yv~~~~   57 (58)
T 1uti_A            2 RWARALYDFEALEEDELGFRSGEVVEVL--DSSNPSWWTGRLHNKLGLFPANYVAPMM   57 (58)
T ss_dssp             CEEEESSCBCCCSTTBCCBCTTCEEEEE--ECCSSSEEEEEETTEEEEEEGGGEEECC
T ss_pred             eEEEECccCCCCCcCCCCCCCCCEEEEE--EECCCCEEEEEECCeEEEeeHHHeEEcc
Confidence            4689999999999999999999999996  4467899999999999999999999864

>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A

Probab=99.50  E-value=3e-14  Score=102.28  Aligned_cols=58  Identities=34%  Similarity=0.743  Sum_probs=51.5

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeec
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC  226 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~  226 (336)
                      ...++|+|+|.++.++||+|++||+|.|+.....++|||.|+.+|+.||||++||+.+
T Consensus         6 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~~W~~g~~~g~~G~~P~~yv~~l   63 (64)
T 2jte_A            6 KEYCRTLFPYTGTNEDELTFREGEIIHLISKETGEAGWWKGELNGKEGVFPDNFAVQI   63 (64)
T ss_dssp             SEEEEESSCBCCSSSSBCCBCTTCEEEEEESCSSSTTEEEEEETTEEEEEEGGGEEEC
T ss_pred             CEEEEECccCCccCCCccCCCCCCEEEEEECCCCCCCEEEEEECCeEEEEeHHHEEEC
Confidence            4679999999999999999999999999643223789999999999999999999976

>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A

Probab=99.50  E-value=2.9e-14  Score=100.30  Aligned_cols=55  Identities=31%  Similarity=0.585  Sum_probs=49.9

Q ss_pred             eeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEee--CceeeecccceeecC
Q psy7077         171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR--GQTGWFPESYVEPCD  227 (336)
Q Consensus       171 ~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~--g~~G~fP~~yve~~~  227 (336)
                      .++|+|+|.++.++||+|++||+|.|+  ...++|||.|+..  |+.||||++||+.++
T Consensus         2 ~~~al~dy~~~~~~eLs~~~Gd~i~v~--~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~   58 (58)
T 1jo8_A            2 WATAEYDYDAAEDNELTFVENDKIINI--EFVDDDWWLGELEKDGSKGLFPSNYVSLGN   58 (58)
T ss_dssp             CEEESSCBCCCSTTBCCBCTTCEEEEE--ECCSSSEEEEEETTTCCEEEEEGGGEEECC
T ss_pred             EEEECceECCCCCCCcccCCCCEEEEE--EecCCCcEEEEECCCCCEEEechHHeEECC
Confidence            589999999999999999999999996  4577899999987  999999999998763

>1udl_A Intersectin 2, KIAA1256; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.50  E-value=2.5e-14  Score=111.71  Aligned_cols=70  Identities=33%  Similarity=0.669  Sum_probs=59.7

Q ss_pred             CCccccccc----------------ccceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeeccc
Q psy7077         158 DRTARFRGV----------------SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPES  221 (336)
Q Consensus       158 ~~~g~~p~~----------------~~~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~  221 (336)
                      |+.|+||.+                .....++|+|+|.++..+||+|++||+|.|+  ...+++||.|+.+|+.||||++
T Consensus         7 g~~G~fP~~~v~~~~~~~~~~~p~~~~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~--~~~~~~Ww~g~~~g~~G~~P~~   84 (98)
T 1udl_A            7 GQKGWFPASHVKLLGPSSERATPAFHPVCQVIAMYDYAANNEDELSFSKGQLINVM--NKDDPDWWQGEINGVTGLFPSN   84 (98)
T ss_dssp             SCCSSCCCCCCCCCSCCCCCCCSCCCCSEEEEESSCCCCSSTTSCCCCTTCEEEEC--BCCSSSEEBCBSSSCBCCEETT
T ss_pred             CCEeEEEhhhEEEcCCcccccCCCCCCceEEEECCCCCCCCCCccCCcCCCEEEEE--EecCCCEEEEEECCcEEEEehH
Confidence            677888764                1235689999999999999999999999996  3467899999999999999999


Q ss_pred             ceeecCCC
Q psy7077         222 YVEPCDET  229 (336)
Q Consensus       222 yve~~~~~  229 (336)
                      ||+.+...
T Consensus        85 yv~~~~~~   92 (98)
T 1udl_A           85 YVKMTTDS   92 (98)
T ss_dssp             SEEECCCC
T ss_pred             HeEEcCCC
Confidence            99998754

>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens}

Probab=99.50  E-value=2.4e-14  Score=103.85  Aligned_cols=58  Identities=26%  Similarity=0.371  Sum_probs=52.1

Q ss_pred             ceeeeeeeecccC--CCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSR--NGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~--~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|+|.++  .++||+|++||+|.|+  ...++|||.|+++|++||||++||+.+..
T Consensus         6 ~~~~~alydy~~~~~~~~eLs~~~Gd~i~v~--~~~~~gWw~g~~~g~~G~fP~~yv~~~~~   65 (67)
T 2eyx_A            6 PIYARVIQKRVPNAYDKTALALEVGELVKVT--KINVSGQWEGECNGKRGHFPFTHVRLLDQ   65 (67)
T ss_dssp             SCBEEECCCBCCCTTCSSBCCBCSSEEEEEE--EECTTSEEEEEETTEEEEEEGGGBCCBCS
T ss_pred             CEEEEEeEEECCCCCCCCccccCCCCEEEEE--EecCCCEEEEEECCCEEEEehHhEEEcCC
Confidence            4579999999999  8999999999999996  34688999999999999999999998763

>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A

Probab=99.50  E-value=2.8e-14  Score=101.79  Aligned_cols=58  Identities=36%  Similarity=0.696  Sum_probs=51.4

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCC
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~  228 (336)
                      .+++|+|+|.++.++||+|++||+|.|+.. ..++|||.|+.+|+.||||++||+.+.+
T Consensus         2 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~~Ww~g~~~g~~G~~P~~yv~~~~~   59 (62)
T 2j6f_A            2 VDYIVEYDYDAVHDDELTIRVGEIIRNVKK-LQEEGWLEGELNGRRGMFPDNFVKEIKR   59 (62)
T ss_dssp             CCEEECSCBCCSSTTBCCBCTTCEEEEEEE-CSSTTEEEEEETTEEEEEEGGGEEECC-
T ss_pred             EEEEECccCCcCCcCCcCCcCCCEEEEEEe-cCCCCEEEEEECCcEEEechHHEEECCC
Confidence            368999999999999999999999999632 2678999999999999999999999864

>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A

Probab=99.50  E-value=3.2e-14  Score=100.43  Aligned_cols=56  Identities=45%  Similarity=0.796  Sum_probs=50.8

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeec
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC  226 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~  226 (336)
                      ...++|+|+|.++.++||+|++||+|.|+.  ..+++||.|+.+|+.||||++||+.+
T Consensus         4 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~--~~~~~Ww~g~~~g~~G~~P~~yv~~l   59 (59)
T 2g6f_X            4 GSVVRAKFNFQQTNEDELSFSKGDVIHVTR--VEEGGWWEGTHNGRTGWFPSNYVREI   59 (59)
T ss_dssp             CCEEEESSCBCCSSTTBCCBCTTCEEEEEE--ECTTSEEEEEETTEEEEEEGGGEEEC
T ss_pred             CcEEEECceeCCCCcCCcCCCCCCEEEEEE--ecCCCEEEEEECCcEEEEeHHHEEEC
Confidence            467999999999999999999999999963  46789999999999999999999864

>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate repeat-containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2kea_A

Probab=99.49  E-value=5.3e-14  Score=103.83  Aligned_cols=58  Identities=28%  Similarity=0.384  Sum_probs=52.4

Q ss_pred             ceeeeeeeecccC--CCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSR--NGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~--~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~  228 (336)
                      ..+++|+|+|.++  .++||+|++||+|.|+  ...++|||.|+++|++||||+|||+.+..
T Consensus         9 ~~~~~alydy~~~~~~~~eLs~~~Gd~i~v~--~~~~~gWw~g~~~g~~G~fP~~yv~~~~~   68 (73)
T 2ebp_A            9 CGRARVHTDFTPSPYDTDSLKLKKGDIIDII--SKPPMGTWMGLLNNKVGTFKFIYVDVLSS   68 (73)
T ss_dssp             SEEEEECSCBCCCTTCCSBCCBCSSCEEEEE--ECCSSSCEEEECSSCEEEECSTTEEECCC
T ss_pred             ceEEEEeeccCCCCCCCCccCCCCCCEEEEE--EeCCCCeEEEEECCCEEEEeHHHEEECCC
Confidence            4679999999976  9999999999999996  44788999999999999999999999874

>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens}

Probab=99.49  E-value=3.4e-14  Score=103.42  Aligned_cols=59  Identities=34%  Similarity=0.684  Sum_probs=52.6

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  229 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~~  229 (336)
                      ...++|+|+|.++.++||+|++||+|.|+.  ..++|||.|+.+|+.||||++||+.+...
T Consensus         3 ~~~~~Alydy~~~~~~eLsf~~Gd~i~v~~--~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~   61 (68)
T 2ew3_A            3 QPCCRGLYDFEPENQGELGFKEGDIITLTN--QIDENWYEGMIHGESGFFPINYVEVIVPL   61 (68)
T ss_dssp             CCEEEESSCBCCCSTTBCCBCTTCEEEEEE--ESSSSEEEEEETTEEEEEEGGGEEESCC-
T ss_pred             CCEEEEeeeECCCCCCccCCCCCCEEEEEE--ecCCCEEEEEECCcEEEeeHHHEEEcCcc
Confidence            357899999999999999999999999964  46789999999999999999999988643

>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A

Probab=99.49  E-value=3.8e-14  Score=100.37  Aligned_cols=58  Identities=31%  Similarity=0.700  Sum_probs=50.8

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeec
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC  226 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~  226 (336)
                      ...++|+|+|.++.++||+|++||+|.|+.....+++||.|+.+|+.||||++||+.+
T Consensus         3 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~~Ww~g~~~g~~G~~P~~yv~~l   60 (60)
T 1oot_A            3 SPKAVALYSFAGEESGDLPFRKGDVITILKKSDSQNDWWTGRVNGREGIFPANYVELV   60 (60)
T ss_dssp             CCEEEESSCBCCCSTTBCCBCTTCEEEEEECCSCTTSEEEEEETTEEEEEEGGGEEEC
T ss_pred             ccEEEECccCCcCCcCEeeEcCCCEEEEEEeCCCCCCeEEEEECCEEEEEeHHHEEEC
Confidence            3578999999999999999999999999643223789999999999999999999864

>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum}

Probab=99.49  E-value=5.6e-14  Score=105.53  Aligned_cols=61  Identities=28%  Similarity=0.450  Sum_probs=53.1

Q ss_pred             cceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCC-eEEEEeeCceeeecccceeecCCCC
Q psy7077         168 EYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPG-WLAGELRGQTGWFPESYVEPCDETG  230 (336)
Q Consensus       168 ~~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~g-W~~g~~~g~~G~fP~~yve~~~~~~  230 (336)
                      ....++|+|+|.++..+||+|++||+|.|+..  .+++ ||.|+.+|+.||||++||+.+....
T Consensus         9 ~~~~~~alydy~~~~~~eLsf~~Gd~i~v~~~--~~~~gWw~g~~~g~~G~fP~~yv~~~~~~~   70 (80)
T 2i0n_A            9 FAKYARALKDYNVSDTSLLPFKRNDIITITFK--DQENKWFMGQLNGKEGSFPVDHVEILLSDV   70 (80)
T ss_dssp             CCCEEEESSCBCCCSSSSCCBCSSEEEEEEEE--SSSSSEEEEEETTEEEEEEGGGEEEESSCC
T ss_pred             CCeEEEECCCCCcCCCCCcCCCCCCEEEEEEe--cCCCCEEEEEECCcEEEechHHEEECCCCC
Confidence            34679999999999999999999999999743  4455 9999999999999999999987543

>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A

Probab=99.49  E-value=4.2e-14  Score=99.40  Aligned_cols=56  Identities=32%  Similarity=0.786  Sum_probs=50.9

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecC
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD  227 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~  227 (336)
                      ..++|+|+|.++.++||+|++||+|.|+  ...++|||.|+.+|+.||||++||+.++
T Consensus         3 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~--~~~~~~Ww~g~~~g~~G~~P~~yv~~~~   58 (58)
T 1sem_A            3 KFVQALFDFNPQESGELAFKRGDVITLI--NKDDPNWWEGQLNNRRGIFPSNYVCPYN   58 (58)
T ss_dssp             CEEEESSCBCCSSTTBCCBCTTCEEEEE--ECSSSSEEEEEETTEEEEEEGGGEEECC
T ss_pred             eEEEECcCCCCCCCCCcCCCCCCEEEEE--EecCCCEEEEEECCcEEEechHHeEECC
Confidence            5689999999999999999999999996  4477899999999999999999998763

>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.49  E-value=8.4e-14  Score=103.98  Aligned_cols=60  Identities=38%  Similarity=0.706  Sum_probs=54.2

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCCCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETG  230 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~~~  230 (336)
                      ...++|+|+|.++..+||+|++||+|.|+  ...+++||.|+.+|+.||||++||+.+....
T Consensus         7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~--~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~~   66 (78)
T 2yuo_A            7 GRRAKALLDFERHDDDELGFRKNDIITII--SQKDEHCWVGELNGLRGWFPAKFVEVLDERS   66 (78)
T ss_dssp             CEEEEESSCBCCSSTTBCCBCTTCEEEEE--ECCSSSEEEEEETTEEEEEEGGGEEEECCCC
T ss_pred             ceEEEECccCCCCCCCCccCCCCCEEEEE--EecCCCEEEEEECCCEEEEehHHEEECCCcC
Confidence            46799999999999999999999999996  4578899999999999999999999987543

>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.49  E-value=2.5e-14  Score=101.99  Aligned_cols=57  Identities=33%  Similarity=0.700  Sum_probs=51.9

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD  227 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~  227 (336)
                      ...++|+|+|.++.++||+|++||+|.|+.  ..++|||.|+.+|+.||||++||+.+.
T Consensus         5 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~--~~~~~Ww~g~~~g~~G~~P~~yv~~~~   61 (62)
T 1k4u_S            5 GSQVEALFSYEATQPEDLEFQEGDIILVLS--KVNEEWLEGESKGKVGIFPKVFVEDSA   61 (62)
T ss_dssp             CEEEECCSCBCCCSSSBCCBCSSCEEEEEE--ESSSSCEEEECSSCEEEECGGGCCCSC
T ss_pred             CeEEEECCCCCcCCCCCccCCCCCEEEEEE--eCCCCEEEEEECCcEEEEeHHHEEECC
Confidence            467999999999999999999999999964  467899999999999999999998764

>2dlp_A KIAA1783 protein; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.49  E-value=7.6e-14  Score=106.03  Aligned_cols=62  Identities=31%  Similarity=0.567  Sum_probs=54.3

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCCCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETG  230 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~~~  230 (336)
                      ...++|+|+|.++..+||+|++||+|.|+.....+++||.|+++|+.||||++||+.+....
T Consensus         8 ~~~~~al~dy~~~~~~eLsf~~Gd~i~v~~~~~~~~~Ww~g~~~g~~G~fP~~yv~~~~~~~   69 (85)
T 2dlp_A            8 SGYVIALRSYITDNCSLLSFHRGDLIKLLPVATLEPGWQFGSAGGRSGLFPADIVQPAAAPD   69 (85)
T ss_dssp             CCEEEESSCBCCSSSSBCCBCTTCEEEECCCSCCCTTEEEEESSSCEEEEETTSEEECCCSC
T ss_pred             CEEEEECCCCCccCcCCccCcCCCEEEEEEccCCCCCeEEEEECCEEEEechHHeEECCCcC
Confidence            45789999999999999999999999996322378899999999999999999999987543

>1uff_A Intersectin 2; beta barrel, SH3 domain, endocytosis, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.49  E-value=1e-13  Score=107.10  Aligned_cols=61  Identities=51%  Similarity=0.950  Sum_probs=53.6

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  229 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~~  229 (336)
                      ...++|+|+|.++..+||+|++||+|.|+.....++|||+|+++|+.||||++||+.+...
T Consensus         5 ~~~~~Alydy~a~~~~eLsf~~Gd~i~v~~~~~~~~gWw~g~~~g~~G~~P~~yv~~~~~~   65 (93)
T 1uff_A            5 SSGYRALYPFEARNHDEMSFNSGDIIQVDEKTVGEPGWLYGSFQGNFGWFPCNYVEKMPSS   65 (93)
T ss_dssp             CCCEEESSCBCCCSSSCCCBCTTCEEEECSSCCCSSSEEEEEETTEEEEEETTTEEECCSS
T ss_pred             CEEEEECccCCCCCCCCcCCCCCCEEEEeEccCCCCCEEEEEECCCEEEechHHeEEcCCc
Confidence            4679999999999999999999999999643223789999999999999999999998754

>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.49  E-value=4.4e-14  Score=103.89  Aligned_cols=60  Identities=28%  Similarity=0.519  Sum_probs=53.5

Q ss_pred             cceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCCC
Q psy7077         168 EYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  229 (336)
Q Consensus       168 ~~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~~  229 (336)
                      ....++|+|+|.++.++||+|++||+|.|+.  ..+++||.|+++|+.||||++||+.+...
T Consensus         8 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~--~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~   67 (72)
T 2dl8_A            8 EPIEAIAKFDYVGRTARELSFKKGASLLLYQ--RASDDWWEGRHNGIDGLIPHQYIVVQDTS   67 (72)
T ss_dssp             SCEEEEESSCBCCSSSSBCCBCTTCEEEEEE--EEETTEEEEEETTEEEEECSSSEEECCSS
T ss_pred             CCEEEEECccCCcCCCCEeccCCCCEEEEEe--ecCCCEEEEEECCEEEEEchHHeEEcCCC
Confidence            3467999999999999999999999999964  35679999999999999999999998754

>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A

Probab=99.48  E-value=4.7e-14  Score=102.28  Aligned_cols=58  Identities=29%  Similarity=0.375  Sum_probs=52.1

Q ss_pred             eeeeeeeecccC--CCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCCC
Q psy7077         170 RRYRAIYEFVSR--NGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  229 (336)
Q Consensus       170 ~~~~al~df~a~--~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~~  229 (336)
                      ..++|+|+|.++  ..+||+|++||+|.|+.  ..++|||.|+.+|++|+||++||+.+...
T Consensus         2 ~~~~al~dy~~~~~~~~eLsf~~Gd~i~v~~--~~~~~Ww~g~~~g~~G~fP~~yv~~~~~~   61 (67)
T 2bzy_A            2 VFAKAIQKRVPCAYDKTALALEVGDIVKVTR--MNINGQWEGEVNGRKGLFPFTHVKIFDPQ   61 (67)
T ss_dssp             EEEEECSCBCSEEECTTBCCBCTTCEEEEEE--ECSSSEEEEEETTEEEEEEGGGEEECCSC
T ss_pred             cEEEEeeeECCCCCCCCccccCCCCEEEEEE--ecCCCeEEEEeCCcEEEEehHHeEECCCc
Confidence            468999999998  99999999999999963  46889999999999999999999998643

>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus}

Probab=99.48  E-value=4.5e-14  Score=99.99  Aligned_cols=56  Identities=38%  Similarity=0.761  Sum_probs=50.9

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeec
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC  226 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~  226 (336)
                      ...++|+|+|.++.++||+|++||+|.|+.  ..+++||.|+.+|+.||||++||+.+
T Consensus         5 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~--~~~~~Ww~g~~~g~~G~~P~~yv~~l   60 (60)
T 2xmf_A            5 SPQCKALYAYDAQDTDELSFNANDIIDIIK--EDPSGWWTGRLRGKQGLFPNNYVTKI   60 (60)
T ss_dssp             SCEEEESSCBCCSSTTBCCBCTTCEEEEEE--ECTTSEEEEEETTEEEEEEGGGEEEC
T ss_pred             CcEEEECccCCcCCcCCcCCCCCCEEEEEE--ecCCCEEEEEECCEEEEEcHHHEEEC
Confidence            467999999999999999999999999964  46789999999999999999999864

>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A

Probab=99.48  E-value=5.8e-14  Score=100.74  Aligned_cols=58  Identities=43%  Similarity=0.791  Sum_probs=52.6

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|+|.++.++||+|++||+|.|+  ...+++||.|+.+|+.||||++||+.+.+
T Consensus         6 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~--~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~   63 (64)
T 2ak5_A            6 QLVVRAKFNFQQTNEDELSFSKGDVIHVT--RVEEGGWWEGTHNGRTGWFPSNYVREIKP   63 (64)
T ss_dssp             CCEEEESSCBCCCSTTBCCBCTTCEEEEE--ECCTTSEEEEEETTEEEEEEGGGEEECCC
T ss_pred             CEEEEEccccCCcCcCcccCCCCCEEEEe--EecCCCEEEEEECCCEEEEehHHeEEcCC
Confidence            45799999999999999999999999996  44678999999999999999999998864

>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A

Probab=99.48  E-value=4.8e-14  Score=99.18  Aligned_cols=55  Identities=33%  Similarity=0.751  Sum_probs=50.3

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeec
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC  226 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~  226 (336)
                      ..++|+|+|.++.++||+|++||+|.|+.  ..+++||.|+.+|+.||||++||+++
T Consensus         3 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~--~~~~~Ww~g~~~g~~G~~P~~yv~~~   57 (58)
T 1zx6_A            3 EYVEALYQFDPQQDGDLGLKPGDKVQLLE--KLSPEWYKGSCNGRTGIFPANYVKPA   57 (58)
T ss_dssp             CEEEECSCBCCCSTTBCCBCTTCEEEEEE--ECSSSEEEEEETTEEEEEEGGGEEEC
T ss_pred             eEEEECceECCCCCCCccCCCCCEEEEEE--ecCCCEEEEEECCcEEEeeHHHEEEc
Confidence            57899999999999999999999999963  46789999999999999999999875

>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.48  E-value=6.8e-14  Score=101.71  Aligned_cols=58  Identities=29%  Similarity=0.765  Sum_probs=53.0

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|+|.++..+||+|++||+|.|+  .+.+++||.|+.+|+.||||++||+.+..
T Consensus         7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~--~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~   64 (68)
T 2dl4_A            7 GNTYVALYKFVPQENEDLEMRPGDIITLL--EDSNEDWWKGKIQDRIGFFPANFVQRLSG   64 (68)
T ss_dssp             CCEEEESSCCCCSSTTBCCCCTTCEEEEE--ECCCSSEEEEECSSCEEEEETTTEEECCC
T ss_pred             CCEEEEeeeECCCCcCCcCCCCCCEEEEE--EeCCCCEEEEEECCcEEEEehHHeEECCC
Confidence            45789999999999999999999999996  45788999999999999999999999874

>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin SH3 domain, SPC-S19P20S circular permutant, S protein; NMR {Synthetic}

Probab=99.48  E-value=7.2e-14  Score=103.03  Aligned_cols=55  Identities=22%  Similarity=0.532  Sum_probs=50.1

Q ss_pred             eeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCC
Q psy7077         171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       171 ~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~  228 (336)
                      +++|+|+|.+ .++||+|++||+|.|+  .+.+++||.|+.+|+.||||++||+.+.+
T Consensus         2 ~a~alydy~~-~~~eLs~~~Gd~i~v~--~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~   56 (73)
T 2kxd_A            2 GAPPLPPYSA-GGREVTMKKGDILTLL--NSTNKDWWKVEVNDRQGFVPAAYVKKLDS   56 (73)
T ss_dssp             CCCCCCSSCC-CSCCCCBCTTCEEEEE--ECCSSSEEEEEETTEEEEEEGGGEEECCS
T ss_pred             eEEEeeeeCC-CCCEeeEcCCCEEEEE--EecCCCEEEEEECCCEEEEehHHeEEcCC
Confidence            5899999998 8999999999999996  44678999999999999999999999864

>2dm1_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.48  E-value=5.3e-14  Score=103.76  Aligned_cols=60  Identities=35%  Similarity=0.692  Sum_probs=52.5

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|+|.++.++||+|++||+|.|+.....+++||.|+.+|+.||||++||+.+..
T Consensus         7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~   66 (73)
T 2dm1_A            7 GGTAVARYNFAARDMRELSLREGDVVRIYSRIGGDQGWWKGETNGRIGWFPSTYVEEEGI   66 (73)
T ss_dssp             SSEEEESSCBCCCSTTBCCBCTTCEEECCBSSSSSSSCEEEEETTEEEEECSSSEEECCC
T ss_pred             CCEEEECccCCcCCCCcCCCCCCCEEEEEEecCCCCCeEEEEECCeEEEeehHHEEEcCC
Confidence            467999999999999999999999999964322256999999999999999999999864

>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A

Probab=99.48  E-value=5.7e-14  Score=98.70  Aligned_cols=56  Identities=38%  Similarity=0.787  Sum_probs=51.0

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecC
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD  227 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~  227 (336)
                      ..++|+|+|.++.++||+|++||+|.|+  ...+++||.|+.+|+.||||++||+.++
T Consensus         3 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~--~~~~~~Ww~g~~~g~~G~~P~~yv~~~~   58 (58)
T 2vwf_A            3 TYVQALFDFDPQEDGELGFRRGDFIHVM--DNSDPNWWKGACHGQTGMFPRNYVTAVN   58 (58)
T ss_dssp             CEEEESSCBCCCSTTBCCBCTTCEEEEE--ECCSSSEEEEEETTEEEEEEGGGEEECC
T ss_pred             eEEEECceECCCCcCCcCCCCCCEEEEE--EcCCCCEEEEEECCcEEEEchHHeEECC
Confidence            5789999999999999999999999996  4467899999999999999999999763

>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.48  E-value=6.1e-14  Score=101.96  Aligned_cols=58  Identities=29%  Similarity=0.599  Sum_probs=52.8

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|+|.++.++||+|++||+|.|+.  ..+++||.|+.+|+.|+||++||+.+..
T Consensus         7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~--~~~~~Ww~g~~~g~~G~~P~~yv~~~~~   64 (68)
T 2dmo_A            7 GEAHRVLFGFVPETKEELQVMPGNIVFVLK--KGNDNWATVMFNGQKGLVPCNYLEPVSG   64 (68)
T ss_dssp             SEEEEECSSCCCCSSSSCCCCTTCEEEECE--ECSSSCEEEEETTEEEEECSTTEEECCC
T ss_pred             CCEEEECcCCCcCCcCCCCCCCCCEEEEEE--eCCCCEEEEEeCCCEEEeehHHeEECCC
Confidence            467999999999999999999999999964  4678999999999999999999999864

>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A

Probab=99.48  E-value=6.4e-14  Score=98.43  Aligned_cols=56  Identities=41%  Similarity=0.902  Sum_probs=50.8

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeec
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC  226 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~  226 (336)
                      ...++|+|+|.++.++||+|++||+|.|+  ...+++||.|+.+|+.||||++||+.+
T Consensus         3 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~--~~~~~~W~~g~~~g~~G~~P~~yv~~l   58 (58)
T 2drm_A            3 GIQVKALYDYDAQTGDELTFKEGDTIIVH--QKDPAGWWEGELNGKRGWVPANYVQDI   58 (58)
T ss_dssp             CEEEEESSCBCCCSTTBCCBCTTCEEEEE--ECCTTSEEEEEETTEEEEEEGGGEEEC
T ss_pred             CcEEEECccCCCCCcCCcCCCCCCEEEEE--EecCCCEEEEEECCcEEEEeHHHEEEC
Confidence            35799999999999999999999999996  446789999999999999999999864

>2da9_A SH3-domain kinase binding protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.48  E-value=6.6e-14  Score=102.32  Aligned_cols=60  Identities=32%  Similarity=0.655  Sum_probs=53.0

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|+|.++.++||+|++||+|.|+.....+++||.|+.+|+.||||++||+.+..
T Consensus         7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~~W~~g~~~g~~G~~P~~yv~~~~~   66 (70)
T 2da9_A            7 GDYCKVIFPYEAQNDDELTIKEGDIVTLINKDCIDVGWWEGELNGRRGVFPDNFVKLLSG   66 (70)
T ss_dssp             SEEEEECSCCCCSSTTBCCCCTTEEEEEEECCCSSTTEEEEECSSCEEEEEGGGEEECCC
T ss_pred             CcEEEECcCCCCCCcCEeeEcCCCEEEEEECCCCCCCeEEEEECCcEEEechHHeEECCC
Confidence            467999999999999999999999999964321378999999999999999999999864

>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} SCOP: b.34.2.0 PDB: 2d1x_A

Probab=99.48  E-value=6.9e-14  Score=100.56  Aligned_cols=57  Identities=35%  Similarity=0.645  Sum_probs=51.6

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD  227 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~  227 (336)
                      ...++|+|+|.++..+||+|++||+|.|+  ...+++||.|+.+|+.||||++||+.++
T Consensus         9 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~--~~~~~~Ww~g~~~g~~G~~P~~yv~~~~   65 (65)
T 3ulr_B            9 GITAIALYDYQAAGDDEISFDPDDIITNI--EMIDDGWWRGVCKGRYGLFPANYVELRQ   65 (65)
T ss_dssp             CSCEEECSCBCCCSTTBCCBCTTCEEEEE--ECCSSSEEEEEETTEEEEEEGGGEEECC
T ss_pred             ceEEEEEeeECCCCcCEeeEecCCEEEEE--EecCCCEEEEEECCcEEEEehHHeEECC
Confidence            46799999999999999999999999995  4567899999999999999999999763

>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain protein 2A, endophilin 1, EEN-B1, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2knb_B 3iql_A

Probab=99.47  E-value=8.6e-14  Score=102.58  Aligned_cols=59  Identities=37%  Similarity=0.700  Sum_probs=53.4

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  229 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~~  229 (336)
                      ...++|+|+|.++..+||+|++||+|.|+  ...+++||.|+++|+.||||++||+.+.+.
T Consensus         7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~--~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~   65 (73)
T 2dbm_A            7 GPCCRALYDFEPENEGELGFKEGDIITLT--NQIDENWYEGMLHGHSGFFPINYVEILVAL   65 (73)
T ss_dssp             CCEEEESSCBCCCSTTCCCBCTTCEEECC--BCSSSSEEEEEETTEEEEEESSSEEESSCC
T ss_pred             CCEEEEccccCCCCCCCccCCCCCEEEEE--EecCCCEEEEEECCCEEEechHHEEEccCC
Confidence            46799999999999999999999999996  346789999999999999999999998753

>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.47  E-value=1.4e-13  Score=103.40  Aligned_cols=59  Identities=22%  Similarity=0.408  Sum_probs=53.2

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  229 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~~  229 (336)
                      ...++|+|+|.++.++||+|++||+|.|+.  +.++|||.|+++|+.||||++||+.+...
T Consensus         8 ~~~~~al~dy~~~~~~eLs~~~Gd~i~vl~--~~~~gWw~g~~~g~~G~~P~~yv~~~~~~   66 (80)
T 2ekh_A            8 ATSYMTCSAYQKVQDSEISFPAGVEVQVLE--KQESGWWYVRFGELEGWAPSHYLVLDENE   66 (80)
T ss_dssp             CEEEEECSCBCCSSTTSCCBCTTCEEEEEE--ECTTSEEEEEETTEEEEEETTTEECCCCC
T ss_pred             CCEEEECCCCCCCCCCccCcCCCCEEEEEE--eCCCCeEEEEECCCEEEEEhHHeEECCCC
Confidence            467999999999999999999999999964  46789999999999999999999988743

>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus}

Probab=99.47  E-value=6.7e-14  Score=103.20  Aligned_cols=58  Identities=36%  Similarity=0.720  Sum_probs=53.0

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|+|.++.++||+|++||+|.|+.  +.+++||.|+.+|+.||||++||+.+.+
T Consensus        13 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~--~~~~~W~~g~~~g~~G~~P~~yv~~~~~   70 (73)
T 3c0c_A           13 QPSCKALYDFEPENDGELGFREGDLITLTN--QIDENWYEGMLHGQSGFFPLSYVQVLVP   70 (73)
T ss_dssp             SCEEEESSCBCCSSTTBCCBCTTCEEEEEE--ECSSSEEEEEETTEEEEEEGGGEEEEEC
T ss_pred             CeEEEECccCCCCCCCCccCcCCCEEEEEE--ecCCCEEEEEECCCEEEeChHHEEECCC
Confidence            467999999999999999999999999964  4678999999999999999999999874

>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus}

Probab=99.47  E-value=7.6e-14  Score=101.38  Aligned_cols=58  Identities=31%  Similarity=0.641  Sum_probs=52.9

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|+|.++.++||+|++||+|.|+  ...+++||.|+.+|+.||||++||+.+.+
T Consensus         7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~--~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~   64 (68)
T 2djq_A            7 GPRAKALCNYRGKNPGDLKFNKGDVILLR--RQLDENWYQGEINGVSGIFPASSVEVISG   64 (68)
T ss_dssp             CCEEEECSCCCSCCTTCCCCCTTCEEEEE--ECCCSSEEEEEETTEEEEEESSSEETTCS
T ss_pred             ceEEEECCCCCCCCcCCccCCCCCEEEEE--EecCCCEEEEEECCcEEEeehHHEEEcCC
Confidence            46799999999999999999999999995  45678999999999999999999998764

>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo sapiens}

Probab=99.47  E-value=4.2e-14  Score=103.05  Aligned_cols=58  Identities=31%  Similarity=0.479  Sum_probs=52.0

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecC---CCCeEEEEeeCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNA---EPGWLAGELRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~---~~gW~~g~~~g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|+|.++.++||+|++||+|.|+.  ..   ++|||.|+.+|+.||||++||+.+..
T Consensus         3 ~~~~~alydy~~~~~~eLs~~~Gd~i~v~~--~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~   63 (69)
T 1wyx_A            3 NVLAKALYDNVAESPDELSFRKGDIMTVLE--QDTQGLDGWWLCSLHGRQGIVPGNRLKILVG   63 (69)
T ss_dssp             EEEEEESSCBCCSSTTBCCBCTTCEEEEEE--TTGGGCTTEEEEEETTEEEEEEGGGEEEEEE
T ss_pred             CEEEEECccCCcCCCCccCCcCCCEEEEeE--CCCCCCCCcEEEEECCcEEEechhhEEECCC
Confidence            357899999999999999999999999963  34   68999999999999999999998863

>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.47  E-value=1.2e-13  Score=103.13  Aligned_cols=67  Identities=36%  Similarity=0.609  Sum_probs=57.1

Q ss_pred             CcccccccccceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCC
Q psy7077         159 RTARFRGVSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       159 ~~g~~p~~~~~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~  228 (336)
                      +.++.|.. ....++|+|+|.++..+||+|++||+|.|+.  +.++|||.|+.+|+.||||++||+.+..
T Consensus         8 ~~~~~p~~-~~~~~~al~dy~~~~~~eLsf~~Gd~i~v~~--~~~~gWw~g~~~g~~G~~P~~yv~~~~~   74 (78)
T 2ed0_A            8 DPPWAPRS-YLEKVVAIYDYTKDKEDELSFQEGAIIYVIK--KNDDGWYEGVMNGVTGLFPGNYVESISG   74 (78)
T ss_dssp             CCTTSCSS-CSEEEEECSCBCCSSTTBCCBCSSCEEEEEE--ECSSSEEEEEETTEEEEEETTSEEECSS
T ss_pred             CCCCCCCC-cCEEEEECccCCccCcCcccccCCCEEEEEE--eCCCCEEEEEECCcEEEeChHHEEEcCC
Confidence            34555543 3467999999999999999999999999964  4678999999999999999999999864

>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A

Probab=99.47  E-value=9.8e-14  Score=103.11  Aligned_cols=59  Identities=34%  Similarity=0.731  Sum_probs=53.0

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeC---ceeeecccceeecCCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRG---QTGWFPESYVEPCDET  229 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g---~~G~fP~~yve~~~~~  229 (336)
                      ...++|+|+|.++.++||+|++||+|.|+  .+.+++||.|++.+   +.||||++||+.+...
T Consensus        10 ~~~~~alydy~~~~~~eLsf~~Gd~i~v~--~~~~~~Ww~g~~~~~~g~~G~~P~~yv~~~~~~   71 (76)
T 2ed1_A           10 VRRVKTIYDCQADNDDELTFIEGEVIIVT--GEEDQEWWIGHIEGQPERKGVFPVSFVHILSDS   71 (76)
T ss_dssp             CEEEEESSCCCCSSSSBCCCCSSCEEEES--SCCSSSEEEEEETTCTTCEEEEEGGGEEECCCC
T ss_pred             CeEEEECccCCCCCcCCcCcCCCCEEEEE--EecCCCEEEEEECCCCCCEEEEehHHeEECCCC
Confidence            56899999999999999999999999996  45788999999866   8999999999998754

>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MLY; 2.20A {Homo sapiens} PDB: 2frw_A 2js0_A

Probab=99.46  E-value=9.3e-14  Score=97.51  Aligned_cols=56  Identities=32%  Similarity=0.621  Sum_probs=50.7

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecC
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD  227 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~  227 (336)
                      ..++|+|+|.++.+++|+|++||+|.|+  ...++|||.|+.+|+.||||++||++..
T Consensus         2 ~~a~al~dy~~~~~~eLs~~~Gd~i~v~--~~~~~~W~~g~~~g~~G~~P~~yv~~~~   57 (58)
T 4e6r_A            2 IPAFVXFAYVAEREDELSLVXGSRVTVM--EXCSDGWWRGSYNGQIGWFPSNYVLEEV   57 (58)
T ss_dssp             EEEEECSCBCCCSTTBCCBCTTCEEEEE--EECTTSEEEEEETTEEEEEEGGGEEECC
T ss_pred             EEEEECccCCCCCCCEeeEeCCCEEEEe--EcCCCCEEEEEECCcEEEEehHHEEECC
Confidence            4689999999999999999999999996  4467899999999999999999999764

>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens}

Probab=99.46  E-value=1e-13  Score=102.09  Aligned_cols=60  Identities=32%  Similarity=0.660  Sum_probs=52.9

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|+|.++.++||+|++||+|.|+.....++|||.|+.+|+.||||++||+.+..
T Consensus         9 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~~W~~g~~~g~~G~~P~~yv~~~~~   68 (73)
T 2k9g_A            9 KDYCKVIFPYEAQNDDELTIKEGDIVTLINKDCIDVGWWEGELNGRRGVFPDNFVKLLPP   68 (73)
T ss_dssp             CEEEEECSCBCCSSTTBCCBCTTCEEEEEECCSSSTTEEEEEETTEEEEEEGGGEEECCS
T ss_pred             ccEEEECccCCCCCCCeeeECCCCEEEEEECCCCCCCEEEEEECCeEEEEchHHEEECCc
Confidence            468999999999999999999999999964321378999999999999999999999864

>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.46  E-value=1.9e-13  Score=102.82  Aligned_cols=60  Identities=28%  Similarity=0.617  Sum_probs=54.0

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCCCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETG  230 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~~~  230 (336)
                      ...++|+|+|.++..+||+|++||+|.|+  ...+++||.|+++|+.||||++||+.+....
T Consensus        10 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~--~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~~   69 (81)
T 2ysq_A           10 IVSAEAVWDHVTMANRELAFKAGDVIKVL--DASNKDWWWGQIDDEEGWFPASFVRLWVNQE   69 (81)
T ss_dssp             CEEEEESSCCCCSSSSSCCCCTTCEEEEE--ECCSSSEEEEECSSCEEEEEGGGEEESSCCC
T ss_pred             ceEEEEeeeECCCCCCcCCCCCCCEEEEE--EEcCcCEEEEEECCCEEEechHHEEEcCCcc
Confidence            46799999999999999999999999996  4467899999999999999999999987543

>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.46  E-value=8.3e-14  Score=101.19  Aligned_cols=58  Identities=24%  Similarity=0.484  Sum_probs=52.6

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|+|.++.++||+|++||+|.|+  ...+++||.|+.+|+.||||++||+.+..
T Consensus         7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~--~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~   64 (68)
T 1x2p_A            7 GEEFVAIADYAATDETQLSFLRGEKILIL--RQTTADWWWGERAGCCGYIPANHVGKHSG   64 (68)
T ss_dssp             CCEEEESSCCCCSSTTBCCCCTTCEEEEE--ECCSSSEEEEECTTCCEEEESSSEECCCC
T ss_pred             CCEEEECceECCCCcCCcCCCCCCEEEEE--EcCCCCEEEEEECCeEEEEehHHeEECCC
Confidence            46799999999999999999999999996  44678999999999999999999998764

>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus}

Probab=99.46  E-value=4.7e-14  Score=99.93  Aligned_cols=55  Identities=27%  Similarity=0.512  Sum_probs=49.8

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceee
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP  225 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~  225 (336)
                      ...++|+|+|.++.++||+|++||+|.|+.  ..+++||.|+.+|+.||||++||+.
T Consensus         6 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~--~~~~~Ww~g~~~g~~G~~P~~yv~~   60 (60)
T 2gnc_A            6 PEFAIAKFDYVGRSARELSFKKGASLLLYH--RASEDWWEGRHNGIDGLVPHQYIVV   60 (60)
T ss_dssp             CEEEEESSCBCCSSTTBCCBCTTCEEEEEE--EEETTEEEEEETTEEEEEEGGGEEC
T ss_pred             CEEEEECCCCCcCCcCCcCCCCCCEEEEEE--ecCCCEEEEEECCeEEEEeHhhEEC
Confidence            468999999999999999999999999964  3567999999999999999999973

>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.46  E-value=1e-13  Score=100.68  Aligned_cols=58  Identities=36%  Similarity=0.729  Sum_probs=52.8

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|+|.++.++||+|++||+|.|+  ...+++||.|+.+|+.||||++||+.+..
T Consensus         7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~--~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~   64 (68)
T 1x2k_A            7 GKVFRALYTFEPRTPDELYFEEGDIIYIT--DMSDTNWWKGTSKGRTGLIPSNYVAEQSG   64 (68)
T ss_dssp             SEEEEESSCCCCCSTTBCCCCSSCEEEEE--ECSCSSEEEEESSSCEEEEETTTEEECCC
T ss_pred             cEEEEECceECCCCCCcccCCCCCEEEEE--EcCCCCEEEEEECCcEEEEehHHeEEcCC
Confidence            46799999999999999999999999996  44778999999999999999999999864

>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A

Probab=99.46  E-value=1.1e-13  Score=100.41  Aligned_cols=58  Identities=33%  Similarity=0.646  Sum_probs=53.0

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|+|.++.++||+|++||+|.|+  ...+++||.|+.+|+.||||++||+.+..
T Consensus         7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~--~~~~~~W~~g~~~g~~G~~P~~yv~~~~~   64 (68)
T 2dl3_A            7 GRPARAKFDFKAQTLKELPLQKGDIVYIY--KQIDQNWYEGEHHGRVGIFPRTYIELLSG   64 (68)
T ss_dssp             SEEEEESSCBCCSSTTBCCBCTTCEEEEE--ECCSTTEEEEECSSCEEEEETTTEEECCS
T ss_pred             CcEEEECccCCCCCcCCccCCCCCEEEEe--EecCCCEEEEEECCCEEEEchHHEEECCC
Confidence            46799999999999999999999999996  45678999999999999999999999864

>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ...

Probab=99.46  E-value=1e-13  Score=98.65  Aligned_cols=57  Identities=23%  Similarity=0.563  Sum_probs=51.6

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD  227 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~  227 (336)
                      ...++|+|+|.++..++|+|++||+|.|+  ...+++||.|+.+|+.||||++||+.++
T Consensus         6 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~--~~~~~~Ww~~~~~g~~G~~P~~yv~~~d   62 (62)
T 3ngp_A            6 KELVLVLYDYQEKSPRELTVKKGDILTLL--NSTNKDWWKIEVNGRQGFVPAAYLKKLD   62 (62)
T ss_dssp             CCEEEECSCBCCCSTTBCCBCTTCEEEEE--ECCSSSEEEEEETTEEEEEEGGGEEECC
T ss_pred             CEEEEECcCCCCCCCCCccCCCCCEEEEe--EecCCCeEEEEECCEEEEEEHHHEEECC
Confidence            45789999999999999999999999996  4467899999999999999999999863

>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.46  E-value=1.7e-13  Score=102.51  Aligned_cols=59  Identities=39%  Similarity=0.801  Sum_probs=53.6

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  229 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~~  229 (336)
                      ...++|+|+|.++.++||+|++||+|.|+  ...+++||.|+.+|+.||||++||+.+...
T Consensus         7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~--~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~   65 (79)
T 2yun_A            7 GRLCKALYSFQARQDDELNLEKGDIVIIH--EKKEEGWWFGSLNGKKGHFPAAYVEELPSN   65 (79)
T ss_dssp             SEEEEESSCBCCSSTTBCCBCTTCEEEEE--ECCSSSCEEEESSSCEEEECSTTEEEESSC
T ss_pred             CCEEEECccCCcCCCCCcCCCCCCEEEEE--EcCCCCEEEEEECCCEEEEEhHHeEECCCC
Confidence            46899999999999999999999999995  456789999999999999999999998754

>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural genomics, structural genomics consortium, SGC, BE barrel; HET: EDT; 1.50A {Homo sapiens} SCOP: b.34.2.1

Probab=99.46  E-value=7.8e-14  Score=101.01  Aligned_cols=59  Identities=37%  Similarity=0.677  Sum_probs=50.4

Q ss_pred             cceeeeeeeecccCCCCC-CCCCCCCEEEEeeeecCCCCeEEEE--eeCceeeecccceeecC
Q psy7077         168 EYRRYRAIYEFVSRNGDE-LSFQPGDIIMVPVKQNAEPGWLAGE--LRGQTGWFPESYVEPCD  227 (336)
Q Consensus       168 ~~~~~~al~df~a~~~~e-Ls~~~Gdii~v~~~~~~~~gW~~g~--~~g~~G~fP~~yve~~~  227 (336)
                      ...+++|+|+|.++..++ |+|++||+|.|+. ...++|||.|+  .+|++||||+|||+.++
T Consensus         6 ~~~~~~al~dy~~~~~~e~Lsf~~Gd~i~v~~-~~~~~gW~~g~~~~~g~~G~fP~~yv~~l~   67 (67)
T 3rnj_A            6 GRMRVKAIFSHAAGDNSTLLSFKEGDLITLLV-PEARDGWHYGESEKTKMRGWFPFSYTRVLD   67 (67)
T ss_dssp             CCCEEEESSCBCCCSCTTBCCBCTTCEEEECS-SSCBTTEEEEEETTTCCEEEEEGGGEEECC
T ss_pred             CCeEEEEccccCCCCCCCCccCCCCCEEEEee-ccCCCCCEEEEECCCCCEEEEEHHHeEECc
Confidence            346899999999988777 9999999999962 33678999999  57999999999999863

>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.46  E-value=1.1e-13  Score=102.60  Aligned_cols=59  Identities=22%  Similarity=0.403  Sum_probs=52.5

Q ss_pred             ceeeeeeeecccCC-------CCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRN-------GDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~-------~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|+|.++.       .+||+|++||+|.|+. ...++|||.|+++|++||||++||+.+..
T Consensus         7 ~~~~~Alydy~~~~~~~~~~~~~eLsf~~Gd~i~v~~-~~~~~gWw~g~~~g~~G~fP~~yv~~~~~   72 (75)
T 2ege_A            7 GKIMIAALDYDPGDGQMGGQGKGRLALRAGDVVMVYG-PMDDQGFYYGELGGHRGLVPAHLLDHMSL   72 (75)
T ss_dssp             SEEEEESSCBCTTTTCCCSSSCCBCCBCTTCEEEEES-CCCTTCEEEEESSSCEEEEETTTEEECCC
T ss_pred             CcEEEECCCCCCCccccCCCCCCcceECCCCEEEEeE-ccCCCCEEEEEECCcEEEEChHHeEEccC
Confidence            46799999999999       9999999999999963 24688999999999999999999998753

>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.46  E-value=1.3e-13  Score=101.62  Aligned_cols=61  Identities=34%  Similarity=0.606  Sum_probs=53.2

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeec-CCCCeEEEEeeCceeeecccceeecCCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQN-AEPGWLAGELRGQTGWFPESYVEPCDET  229 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~-~~~gW~~g~~~g~~G~fP~~yve~~~~~  229 (336)
                      ...++|+|+|.++.++||+|++||+|.|+.... .+++||.|+.+|+.||||++||+.+...
T Consensus         8 ~~~~~alydy~~~~~~eLsf~~Gd~i~v~~~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~   69 (73)
T 2dl7_A            8 VCFVKALYDYEGQTDDELSFPEGAIIRILNKENQDDDGFWEGEFNGRIGVFPSVLVEELSSG   69 (73)
T ss_dssp             CEEEEESSCBCCSSTTBCCBCTTCEEEEEECCCSSSSSCEEEEETTEEEEECSSSEEECCSS
T ss_pred             CEEEEECccCCcCCCCcCCCCCCCEEEEEECCCCCCCCcEEEEECCCEEEEChHHEEECCCC
Confidence            467999999999999999999999999964211 4789999999999999999999998743

>1z9q_A Neutrophil cytosol factor 4; oxidoreductase activator; NMR {Homo sapiens}

Probab=99.46  E-value=4.9e-14  Score=105.58  Aligned_cols=58  Identities=34%  Similarity=0.688  Sum_probs=53.0

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|+|.++.++||+|++||+|.|+.  ..++|||.|+.+|+.||||++||+.+.+
T Consensus        18 ~~~~~Alydy~a~~~~eLsf~~Gd~I~Vl~--~~~~gWw~g~~~g~~G~fP~nyV~~~~~   75 (79)
T 1z9q_A           18 APRAEALFDFTGNSKLELNFKAGDVIFLLS--RINKDWLEGTVRGATGIFPLSFVKILKD   75 (79)
T ss_dssp             CCCEEESSCCCCSSTTBCCCCTTCCBCCCE--ESSSSEEEEEETTEEEEEEGGGEEESSC
T ss_pred             ceEEEEcCccCCCCCCcccccCCCEEEEeE--ecCCCEEEEEECCeEEEecHHHEEECCC
Confidence            467999999999999999999999999963  4688999999999999999999999874

>1ugv_A KIAA0621, olygophrenin-1 like protein; beta barrel, GRAF protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.45  E-value=7.6e-14  Score=102.64  Aligned_cols=60  Identities=38%  Similarity=0.732  Sum_probs=53.3

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  229 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~~  229 (336)
                      ...++|+|+|.++..+||+|++||+|.|+. ...+++||.|+.+|+.||||++||+.+...
T Consensus        10 ~~~~~alydy~~~~~~eLsf~~Gd~i~v~~-~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~   69 (72)
T 1ugv_A           10 FRKAKALYACKAEHDSELSFTAGTVFDNVH-PSQEPGWLEGTLNGKTGLIPENYVEFLSGP   69 (72)
T ss_dssp             CCCEEESSCBCCCSSSBCCBCTTCEEBSCC-BCSSTTEEEEESSSCEEEEEGGGEEECCSS
T ss_pred             ccEEEEccccCCcCCCEeCCcCCCEEEEEE-ecCCCCeEEEEECCcEEEecHHHEEECCCC
Confidence            467999999999999999999999999863 246789999999999999999999998743

>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} SCOP: b.34.2.1

Probab=99.45  E-value=1.1e-13  Score=101.79  Aligned_cols=59  Identities=22%  Similarity=0.533  Sum_probs=52.9

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  229 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~~  229 (336)
                      ...++|+|||.++.++||+|++||+|.|+  ...+++||.|+.+|+.||||++||+.+...
T Consensus         5 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~--~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~   63 (73)
T 3thk_A            5 KELVLALYDYQEKSPREVTMKKGDILTLL--NSTNKDWWKVEVNDRQGFVPAAYVKKLDPA   63 (73)
T ss_dssp             CCEEEECSCBCCCSTTBCCBCTTCEEEEE--ECCSSSEEEEEETTEEEEEEGGGEEECCC-
T ss_pred             CEEEEECcCCCcCCCCccCCCCCCEEEEE--ECCCCCeEEEEECCcEEEEehHHeEECCCC
Confidence            46789999999999999999999999995  446789999999999999999999998754

>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1

Probab=99.45  E-value=9.7e-14  Score=100.06  Aligned_cols=58  Identities=29%  Similarity=0.638  Sum_probs=51.4

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEE-eeCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE-LRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~-~~g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|+|.++.++||+|++||+|.|+  ...+++||.|+ .+|+.||||++||+...+
T Consensus         3 ~~~~~Alydy~~~~~~eLsf~~Gd~i~v~--~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~~   61 (65)
T 1b07_A            3 AEYVRALFDFNGNDEEDLPFKKGDILRIR--DKPEEQWWNAEDSEGKRGMIPVPYVEKYHH   61 (65)
T ss_dssp             CCEEEESSCBCCSSTTBCCBCTTCEEEEE--ECSSSSEEEEECTTSCEEEEEGGGEEECC-
T ss_pred             ceEEEECCcCCCCCCCccCCcCCCEEEEE--EecCCCeEEEEECCCCEEEEChHHEeecCC
Confidence            35789999999999999999999999996  44678999999 689999999999998764

>2epd_A RHO GTPase-activating protein 4; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.45  E-value=7e-14  Score=103.95  Aligned_cols=60  Identities=28%  Similarity=0.526  Sum_probs=53.5

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCCCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETG  230 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~~~  230 (336)
                      ...++|+|+|.++.++||+|++||+|.|+.  ..+++||.|+++|+.||||++||+.+....
T Consensus        10 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~--~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~~   69 (76)
T 2epd_A           10 VVEAVACFAYTGRTAQELSFRRGDVLRLHE--RASSDWWRGEHNGMRGLIPHKYITLPAGTE   69 (76)
T ss_dssp             CEEEEESSCEECSSTTBCEECTTCEEEEEE--EEETTEEEEEETTEEEEEESSSEECCSSCS
T ss_pred             CEEEEECcCCCCCCCCccCCCCCCEEEEEE--eCCCCEEEEEECCcEEEEehHHEEEcCCCC
Confidence            367999999999999999999999999964  356899999999999999999999987543

>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens}

Probab=99.45  E-value=1.2e-13  Score=97.17  Aligned_cols=54  Identities=39%  Similarity=0.824  Sum_probs=49.7

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceee
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP  225 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~  225 (336)
                      ..++|+|+|.++.++||+|++||+|.|+  ...+++||.|+.+|+.||||++||++
T Consensus         4 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~--~~~~~~Ww~g~~~g~~G~~P~~yv~~   57 (58)
T 1zlm_A            4 KVFRALYTFEPRTPDELYFEEGDIIYIT--DMSDTNWWKGTSKGRTGLIPSNYVAE   57 (58)
T ss_dssp             EEEEESSCBCCSSTTBCCBCTTCEEEEE--ECCSSSEEEEEETTEEEEEEGGGEEE
T ss_pred             EEEEECccCCCCCCCCccCCCCCEEEEE--EeCCCCEEEEEECCCEEEEehHHEEe
Confidence            5789999999999999999999999996  34778999999999999999999975

>1nm7_A Peroxisomal membrane protein PAS20; yeast, PEX5P, PEX14P, PEX13P, import machine, SH3 domain, protein transport; NMR {Saccharomyces cerevisiae} SCOP: b.34.2.1

Probab=99.45  E-value=8.7e-14  Score=101.47  Aligned_cols=57  Identities=28%  Similarity=0.652  Sum_probs=48.6

Q ss_pred             eeeeeeeecccCCCC-CCCCCCCCEEEEeeeecC---CCCeEEEEe-eCceeeecccceeec
Q psy7077         170 RRYRAIYEFVSRNGD-ELSFQPGDIIMVPVKQNA---EPGWLAGEL-RGQTGWFPESYVEPC  226 (336)
Q Consensus       170 ~~~~al~df~a~~~~-eLs~~~Gdii~v~~~~~~---~~gW~~g~~-~g~~G~fP~~yve~~  226 (336)
                      ..++|+|+|.+++++ ||+|++||+|.|+.....   +++||.|++ +|+.|+||+|||+.+
T Consensus         8 ~~~~aly~y~a~~~~dELsf~~Gd~i~Vl~~~~~~~~~~gWW~g~~~~G~~G~~PsnyV~~l   69 (69)
T 1nm7_A            8 HFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEII   69 (69)
T ss_dssp             -CEEECSCCCCSSTTSCCCCCTTCEEEECCSSSSSCCSSSCEEEEETTTEEEEECGGGEEEC
T ss_pred             eEEEEEecccCCCCCCccCCCCCCEEEEEecCCCCCCCCCeeEEEeCCCCEEEecHHHEEEC
Confidence            468999999999999 999999999999743211   459999998 899999999999864

>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A

Probab=99.45  E-value=8.8e-14  Score=97.41  Aligned_cols=55  Identities=31%  Similarity=0.681  Sum_probs=48.8

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEE-eeCceeeecccceeec
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE-LRGQTGWFPESYVEPC  226 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~-~~g~~G~fP~~yve~~  226 (336)
                      ..++|+|+|.++.++||+|++||+|.|+  ...++|||.|+ .+|+.||||++||+.+
T Consensus         2 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~--~~~~~~Ww~g~~~~g~~G~~P~~yv~~~   57 (57)
T 1cka_A            2 EYVRALFDFNGNDEEDLPFKKGDILRIR--DKPEEQWWNAEDSEGKRGMIPVPYVEKY   57 (57)
T ss_dssp             CEEEESSCBCCSSTTBCCBCTTCEEEEE--ECSSSSEEEEECTTSCEEEEEGGGEEC-
T ss_pred             cEEEECCcCCCCCCCCCCCCCCCEEEEE--EecCCCcEEEEeCCCCEEEEeHHHEEEC
Confidence            3688999999999999999999999996  44678999999 6899999999999864

>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A

Probab=99.45  E-value=1.4e-13  Score=99.93  Aligned_cols=56  Identities=27%  Similarity=0.472  Sum_probs=50.4

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeC-----ceeeecccceeec
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRG-----QTGWFPESYVEPC  226 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g-----~~G~fP~~yve~~  226 (336)
                      ...++|+|+|.++.++||+|++||+|.|+  ...+++||.|++.+     +.|+||++||+.+
T Consensus         7 ~~~~~Alydy~~~~~~eLsf~~Gd~i~v~--~~~~~~Ww~g~~~~~g~~~~~G~fP~~yv~~~   67 (68)
T 1tg0_A            7 PFKVVAQFPYKSDYEDDLNFEKDQEIIVT--SVEDAEWYFGEYQDSNGDVIEGIFPKSFVAVQ   67 (68)
T ss_dssp             SEEEEESSCBCCSCTTBCCBCTTCEEEEE--EECSSSEEEEEEECTTSCEEEEEEEGGGEEEC
T ss_pred             CEEEEECeeECcCCcCCCCCCCCCEEEEE--EecCCCeEEEEECCCCCCCEEEEEchHHEEEC
Confidence            45799999999999999999999999996  44788999999876     8999999999875

>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A

Probab=99.45  E-value=1.8e-13  Score=99.62  Aligned_cols=58  Identities=31%  Similarity=0.784  Sum_probs=51.5

Q ss_pred             eeeeeeeecc-cCCCCCCCCCCCCEEEEeeeecCCCCeEEEEee--CceeeecccceeecCCC
Q psy7077         170 RRYRAIYEFV-SRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR--GQTGWFPESYVEPCDET  229 (336)
Q Consensus       170 ~~~~al~df~-a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~--g~~G~fP~~yve~~~~~  229 (336)
                      ..++|+|+|+ ++.++||+|++||+|.|+.  ..++|||.|+..  |+.||||++||+.+...
T Consensus         3 ~~~~alydy~~~~~~~eLs~~~Gd~i~v~~--~~~~~W~~g~~~~~g~~G~~P~~yv~~~~~~   63 (69)
T 1ruw_A            3 PKFEAAYDFPGSGSSSELPLKKGDIVFISR--DEPSGWSLAKLLDGSKEGWVPTAYMTPYKDT   63 (69)
T ss_dssp             SEEEESSCBCCCSCTTBCCBCTTCEEEEEE--ECTTSEEEEEETTSSCEEEEEGGGEEECCSC
T ss_pred             cEEEEccccCCCCCCCcccCCCCCEEEEEE--ecCCCeEEEEECCCCCEEEEehHHeEEcCCc
Confidence            5689999996 9999999999999999964  457899999986  99999999999988643

>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.45  E-value=1.2e-13  Score=101.17  Aligned_cols=58  Identities=28%  Similarity=0.450  Sum_probs=52.7

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecC---CCCeEEEEeeCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNA---EPGWLAGELRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~---~~gW~~g~~~g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|+|.++.++||+|++||+|.|+.  ..   +++||.|+.+|+.||||++||+.+..
T Consensus         7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~--~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~   67 (71)
T 2cre_A            7 GLLARALYDNCPDCSDELAFSRGDILTILE--QHVPESEGWWKCLLHGRQGLAPANRLQILSG   67 (71)
T ss_dssp             CEEEEESSCCCCSSSSBCCCCSSCCEEEEE--SCCTTSTTEEEEESSSCCEEEETTTEEECCC
T ss_pred             cEEEEECcccCcCCCCCCCCCCCCEEEEeE--cCCCCCCCcEEEEECCCEEEEehHHEEECCC
Confidence            467999999999999999999999999964  34   78999999999999999999999864

>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A

Probab=99.45  E-value=1.5e-13  Score=97.65  Aligned_cols=57  Identities=30%  Similarity=0.693  Sum_probs=51.0

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCcee-eecccceeecC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTG-WFPESYVEPCD  227 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G-~fP~~yve~~~  227 (336)
                      ...++|+|+|.++.++||+|++||+|.|+  ...+++||.|+.+|+.| |||++||+.+.
T Consensus         3 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~--~~~~~~W~~g~~~g~~gG~~P~~yv~~~~   60 (61)
T 1y0m_A            3 KSAVKALFDYKAQREDELTFTKSAIIQNV--EKQDGGWWRGDYGGKKQLWFPSNYVEEMI   60 (61)
T ss_dssp             CCCEEESSCBCCCSTTBCCBCTTCEEEEE--ECCSSSEEEEEETTEEEEEEEGGGEEECC
T ss_pred             CCEEEECcCCCcCCCCCcCCcCCCEEEEE--EecCCCEEEEEECCeEEEEEChHHcEECC
Confidence            35789999999999999999999999996  44678999999998886 99999999875

>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A

Probab=99.44  E-value=1.2e-13  Score=99.47  Aligned_cols=57  Identities=33%  Similarity=0.558  Sum_probs=50.9

Q ss_pred             ceeeeeeeeccc-CCCCCCCCCCCCEEEEeeeecCCCCeEEEE--eeCceeeecccceeecC
Q psy7077         169 YRRYRAIYEFVS-RNGDELSFQPGDIIMVPVKQNAEPGWLAGE--LRGQTGWFPESYVEPCD  227 (336)
Q Consensus       169 ~~~~~al~df~a-~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~--~~g~~G~fP~~yve~~~  227 (336)
                      ..+++|+|+|.+ +.++||+|++||+|.|+  ...++|||.|+  .+|+.||||++||+.++
T Consensus         5 ~~~~~alydy~~~~~~~eLs~~~Gd~i~v~--~~~~~gW~~g~~~~~g~~G~~P~~yv~~~~   64 (65)
T 2j05_A            5 RRRVRAILPYTKVPDTDEISFLKGDMFIVH--NELEDGWMWVTNLRTDEQGLIVEDLVEEVG   64 (65)
T ss_dssp             TCEEEESSCBCCCTTSSBCCBCTTCEEEEE--EECTTSEEEEEETTTCCEEEEEGGGEEECC
T ss_pred             CcEEEEccccCCCCCCCcCcCCCCCEEEEe--EecCCCEEEEEECCCCCEEEEEhHHeEECc
Confidence            357999999999 99999999999999996  34678999999  57999999999999875

>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=1.6e-13  Score=100.48  Aligned_cols=59  Identities=25%  Similarity=0.582  Sum_probs=53.3

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  229 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~~  229 (336)
                      ...++|+|+|.++.++||+|++||+|.|+  ...+++||.|+..|+.||||++||+.+...
T Consensus         8 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~--~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~   66 (71)
T 2dnu_A            8 EEKYVTVQPYTSQSKDEIGFEKGVTVEVI--RKNLEGWWYIRYLGKEGWAPASYLKKAKDS   66 (71)
T ss_dssp             SEEEECSSCBCCSSTTBCCBCTTCEEEEC--CCCSSSEEEEEETTEEEEEEGGGCEECCCC
T ss_pred             CCEEEECCccCCCCCCCCcCCCCCEEEEe--ECCCCCeEEEEECCcEEEEEHHHeEEccCC
Confidence            46799999999999999999999999996  446789999999999999999999998753

>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A*

Probab=99.44  E-value=1.2e-13  Score=98.50  Aligned_cols=56  Identities=34%  Similarity=0.562  Sum_probs=50.4

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEE--eeCceeeecccceeecC
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE--LRGQTGWFPESYVEPCD  227 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~--~~g~~G~fP~~yve~~~  227 (336)
                      ..++|+|+|.++.++||+|++||+|.|+  ...++|||.|+  .+|+.|+||++||+.+.
T Consensus         4 ~~~~al~~y~~~~~~eLs~~~Gd~i~v~--~~~~~~W~~g~~~~~g~~G~fP~~yv~~~~   61 (62)
T 2fpe_A            4 QTHRAIFRFVPRHEDELELEVDDPLLVE--LQAEDYWYEAYNMRTGARGVFPAYYAIEVT   61 (62)
T ss_dssp             CCEEECSCBCCSSTTBCCBCTTCEEEEE--EECTTSEEEEEETTTCCEEEEEGGGEEECC
T ss_pred             CEEEECccCCccCcCcCcCCCCCEEEEE--EecCCCEEEEEECCCCCEEEechHHEEECc
Confidence            5689999999999999999999999995  44778999998  57999999999999864

>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae}

Probab=99.44  E-value=2.3e-13  Score=99.58  Aligned_cols=58  Identities=26%  Similarity=0.617  Sum_probs=52.5

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecC-CCCeEEEEe--eCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNA-EPGWLAGEL--RGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~-~~gW~~g~~--~g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|+|.++.++||+|++||+|.|+.  .. ++|||.|+.  +|+.||||++||+.+..
T Consensus         6 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~--~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~~   66 (71)
T 2jt4_A            6 KKRGIVQYDFMAESQDELTIKSGDKVYILD--DKKSKDWWMCQLVDSGKSGLVPAQFIEPVRD   66 (71)
T ss_dssp             CEEEEECSCBCCSSTTBCCBCTTCEEEEEE--SSSCSSEEEEEETTTCCEEEEEGGGEEETTT
T ss_pred             CCEEEEcccCCCCCCCcccCCCCCEEEEEE--CCCCCCCEEEEECCCCCeEEechHHeEECCC
Confidence            468999999999999999999999999963  34 789999998  89999999999999874

>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae}

Probab=99.44  E-value=1.3e-13  Score=101.80  Aligned_cols=59  Identities=32%  Similarity=0.630  Sum_probs=52.3

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEee--CceeeecccceeecCCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR--GQTGWFPESYVEPCDET  229 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~--g~~G~fP~~yve~~~~~  229 (336)
                      ...++|+|+|.++.++||+|++||+|.|+.  +.++|||.|+..  |+.||||++||+.+...
T Consensus         5 ~~~~~Alydy~a~~~~eLs~~~Gd~i~v~~--~~~~gWw~g~~~~~g~~G~~P~~yv~~~~~~   65 (73)
T 2lcs_A            5 NQRAVALYDFEPENDNELRLAEGDIVFISY--KHGQGWLVAENESGSKTGLVPEEFVSYIQPE   65 (73)
T ss_dssp             CEEEEESSCBCCSSTTBCCBCTTCEEEEEE--EETTTEEEEECTTSSCEEEEESTTEEECCSS
T ss_pred             CCEEEECccCCCCCCCccCCcCCCEEEEEE--EcCCCEEEEEECCCCCEEEeeHHHEEECCCC
Confidence            367999999999999999999999999964  467899999984  89999999999998643

>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1

Probab=99.44  E-value=1.8e-13  Score=103.49  Aligned_cols=58  Identities=21%  Similarity=0.513  Sum_probs=52.7

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|||.++.++||+|++||+|.|+  ...++|||.|+.+|+.||||++||+.+..
T Consensus        17 ~~~~~Alydy~a~~~~eLsf~~Gd~i~Vl--~~~~~gWw~g~~~g~~G~~P~~yv~~~~~   74 (83)
T 1neg_A           17 KELVLALYDYQEKSPREVTMKKGDILTLL--NSTNKDWWKVEVNDRQGFVPAAYVKKLAA   74 (83)
T ss_dssp             CCEEEESSCBCCSSTTBCCBCTTCEEEEE--ECCSSSEEEEEETTEEEEEEGGGEEECCT
T ss_pred             ceEEEEccccCCCCCCccccCCCCEEEEE--EecCCCEEEEEECCeEEEEEHHHEEECCC
Confidence            46799999999999999999999999996  44678999999999999999999999864

>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1

Probab=99.44  E-value=1.4e-13  Score=98.20  Aligned_cols=55  Identities=36%  Similarity=0.765  Sum_probs=50.4

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceee
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP  225 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~  225 (336)
                      ...++|+|+|.++.++||+|++||+|.|+  ...+++||.|+..|+.||||++||+.
T Consensus         5 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~--~~~~~~Ww~g~~~g~~G~~P~~yv~~   59 (62)
T 1uj0_A            5 ARRVRALYDFEAVEDNELTFKHGELITVL--DDSDANWWQGENHRGTGLFPSNFVTT   59 (62)
T ss_dssp             CEEEEESSCBCCCSTTBCCBCTTCEEEEE--ECCSSSEEEEEETTEEEEEEGGGEES
T ss_pred             CeEEEECccCCCCCcCCcCCCCCCEEEEE--EeCCCCEEEEEECCCEEEechhHEEE
Confidence            46799999999999999999999999996  45778999999999999999999985

>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A

Probab=99.44  E-value=1.6e-13  Score=98.60  Aligned_cols=56  Identities=23%  Similarity=0.582  Sum_probs=50.1

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEee--------CceeeecccceeecC
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR--------GQTGWFPESYVEPCD  227 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~--------g~~G~fP~~yve~~~  227 (336)
                      ..++|+|+|.++.++||+|++||+|.|+  ...+++||.|+..        |+.||||++||+.++
T Consensus         2 ~~~~alydy~~~~~~eLs~~~Gd~i~v~--~~~~~~Ww~g~~~~~~~g~~~g~~G~~P~~yv~~l~   65 (65)
T 2oaw_A            2 ELVLALYDYQEKSPREVTMKKGDILTLL--NSTNKDWWKVEVKITVNGKTYERQGFVPAAYVKKLD   65 (65)
T ss_dssp             EEEEECSCBCCSSTTBCCBCTTCEEEEE--ECCSSSEEEEEEEEEETTEEEEEEEEEEGGGEEECC
T ss_pred             cEEEEcccCCccCCCCCCCCCCCEEEEE--EcCCCCEEEEEEccccCCCcCCcEEEEchHHeEEcC
Confidence            4689999999999999999999999996  4567899999976        899999999999763

>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N protein 1; endocytosis, N-WAsp, dynamin, pacsin I, transferase; 2.64A {Mus musculus} PDB: 2x3x_D

Probab=99.44  E-value=1.1e-13  Score=97.82  Aligned_cols=57  Identities=40%  Similarity=0.733  Sum_probs=48.7

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEee-Cceeeecccceeec
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR-GQTGWFPESYVEPC  226 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~-g~~G~fP~~yve~~  226 (336)
                      ...++|+|+|.++.++||+|++||+|.|+. ...++|||.|+.+ |+.||||++||+.+
T Consensus         3 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~-~~~~~~W~~g~~~~g~~G~~P~~yv~~l   60 (60)
T 2x3w_D            3 GVRVRALYDYDGQEQDELSFKAGDELTKLG-EEDEQGWCRGRLDSGQLGLYPANYVEAI   60 (60)
T ss_dssp             -CEEEECSCBCCSSSSBCCBCTTCEEEECS-CCCSSSEEEEECSSCCEEEEEGGGEEC-
T ss_pred             CCEEEECcccCccCCCcccCCCCCEEEEEE-ccCCCCceEEEeCCCCEEEecHHHEEEC
Confidence            357899999999999999999999999964 2244699999987 99999999999864

>2lx7_A GAS-7, growth arrest-specific protein 7; structural genomics, northeast structural genomics consortiu target HR8574A, PSI-biology; NMR {Homo sapiens}

Probab=99.44  E-value=9.1e-14  Score=98.45  Aligned_cols=39  Identities=36%  Similarity=0.758  Sum_probs=36.0

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEe-CCceeEeeCCCeeec
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGEL-RGQTGWFPESYVEPC  316 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~-~G~~G~fPsnyV~~i  316 (336)
                      |+|++||+|.|+++.+++||.|+. +|++||||+|||++|
T Consensus        21 Ls~~~Gd~i~v~~~~~~~Ww~g~~~~G~~G~fP~nyVe~i   60 (60)
T 2lx7_A           21 LRFAAGELITLLQVPDGGWWEGEKEDGLRGWFPASYVQLL   60 (60)
T ss_dssp             CCCCTTCEEEBSCCCTTSCEEEECTTSCEEEECGGGEEEC
T ss_pred             ccCCCCCEEEEeEecCCCeEEEEeCCCCEEEEcHHHEEEC
Confidence            559999999999999999999987 799999999999975

>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.44  E-value=1.1e-13  Score=103.92  Aligned_cols=62  Identities=37%  Similarity=0.631  Sum_probs=53.4

Q ss_pred             ccceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCC
Q psy7077         167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       167 ~~~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~  228 (336)
                      .....++|+|+|.++..+||+|++||+|.|+.....+++||+|+++|+.||||++||+.+..
T Consensus        15 ~~~~~~~al~dy~~~~~~eLsf~~Gd~i~v~~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~   76 (80)
T 2d8h_A           15 NQPIEVTALYSFEGQQPGDLNFQAGDRITVISKTDSHFDWWEGKLRGQTGIFPANYVTMNSG   76 (80)
T ss_dssp             SSCEEEECSSCEECSSTTBCEECTTCEEEEEECCSCSSSEEEEEETTEEEEEEGGGCCBCCC
T ss_pred             CCCEEEEECccCCcCCCCeeeEcCCCEEEEeECcCCCCCeEEEEECCEEEEEchhHeEEcCC
Confidence            34578999999999999999999999999974322248999999999999999999998764

>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae}

Probab=99.44  E-value=1.2e-13  Score=95.62  Aligned_cols=52  Identities=42%  Similarity=0.785  Sum_probs=47.0

Q ss_pred             eeeeeeecccCCCCCCCCCCCCEEEEeeeecC-CCCeEEEEeeCceeeeccccee
Q psy7077         171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNA-EPGWLAGELRGQTGWFPESYVE  224 (336)
Q Consensus       171 ~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~-~~gW~~g~~~g~~G~fP~~yve  224 (336)
                      +++|+|+|.++.++||+|++||+|.|+.  .. .++||.|+.+|+.||||++||+
T Consensus         2 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~--~~~~~~W~~g~~~g~~G~~P~~yv~   54 (54)
T 2a28_A            2 AMEAIYAYEAQGDDEISIDPGDIITVIR--GDDGSGWTYGECDGLKGLFPTSYCK   54 (54)
T ss_dssp             EEEBCSCBCCCSTTBCCBCTTCEEEEEE--CCCSSSEEEEEETTEEEEEEGGGBC
T ss_pred             EEEECccCCcCCCCCccCCCCCEEEEEE--ecCCCCEEEEEECCeEEEeeHHHcC
Confidence            5889999999999999999999999964  34 3799999999999999999985

>3u23_A CD2-associated protein; structural genomics, structural genomics consortium, SGC, BE barrel, adaptor protein, protein binding; 1.11A {Homo sapiens} PDB: 2krn_A

Probab=99.44  E-value=1e-13  Score=99.49  Aligned_cols=57  Identities=33%  Similarity=0.763  Sum_probs=51.5

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD  227 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~  227 (336)
                      ...++|+|+|.++..+||+|++||+|.|+.  ..+++||.|+.+|+.||||++||+.++
T Consensus         7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~--~~~~~W~~g~~~g~~G~~P~~yv~~~~   63 (65)
T 3u23_A            7 KRQCKVLFEYIPQNEDELELKVGDIIDINE--EVEEGWWSGTLNNKLGLFPSNFVKELE   63 (65)
T ss_dssp             -CEEEECSCBCCSSTTBCCBCTTCEEEEEE--EEETTEEEEEETTEEEEEEGGGEEECC
T ss_pred             CeEEEEeeeeCCCCcCCcCCCCCCEEEEEE--ecCCCEEEEEECCCEEEeehHHEEECc
Confidence            467999999999999999999999999964  467899999999999999999999875

>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens}

Probab=99.44  E-value=1.5e-13  Score=100.04  Aligned_cols=58  Identities=40%  Similarity=0.753  Sum_probs=52.7

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|+|.++.++||+|++||+|.|+  ...+++||.|+.+|+.||||++||+.+..
T Consensus         8 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~--~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~   65 (69)
T 2dil_A            8 AQEYRALYDYTAQNPDELDLSAGDILEVI--LEGEDGWWTVERNGQRGFVPGSYLEKLSG   65 (69)
T ss_dssp             CCEEECCSCBCCSSSSSCCBCTTCEEEEE--ECCSSSEEEEEETTEEEEEEGGGCCBCCC
T ss_pred             CcEEEECccCCccCcCccCCCCCCEEEEE--ECCCCCEEEEEECCCEEEEehHHeEEcCC
Confidence            46799999999999999999999999996  44678999999999999999999998764

>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.44  E-value=1.3e-13  Score=100.78  Aligned_cols=58  Identities=26%  Similarity=0.604  Sum_probs=52.8

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|+|+++.++||+|++||+|.|+.  ..+++||.|+.+|+.||||++||+.+..
T Consensus         8 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~--~~~~~Ww~g~~~g~~G~~P~~yv~~~~~   65 (70)
T 2ega_A            8 LEQYVVVSNYKKQENSELSLQAGEVVDVIE--KNESGWWFVSTSEEQGWVPATYLEAQNS   65 (70)
T ss_dssp             CBCEECCSCCCCCSSSSCCCCTTCBCEEEE--ECTTSEEEEECSSCEEEEEGGGCEESCC
T ss_pred             CcEEEECceECCCCCCcccCCCCCEEEEEE--ccCCCeEEEEECCCEEEEehHHcEECCC
Confidence            467999999999999999999999999964  4678999999999999999999998874

>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A

Probab=99.44  E-value=1.9e-13  Score=96.63  Aligned_cols=56  Identities=27%  Similarity=0.621  Sum_probs=49.8

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe--eCceeeecccceeec
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPC  226 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~--~g~~G~fP~~yve~~  226 (336)
                      ..++|+|+|.++.++||+|++||+|.|+. ...+++||.|+.  +|+.||||++||+.+
T Consensus         3 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~-~~~~~~Ww~g~~~~~g~~G~~P~~yv~~l   60 (60)
T 2v1q_A            3 ERGIVQYDFMAESQDELTIKSGDKVYILD-DKKSKDWWMCQLVDSGKSGLVPAQFIEPV   60 (60)
T ss_dssp             CEEEECSCBCCCSTTBCCBCTTCEEEEEE-SSSCSSEEEEEETTTCCEEEEEGGGEEEC
T ss_pred             cEEEEeeeECCCCCCCccCCCCCEEEEEe-CCCCCCCEEEEECCCCCEEEEEHHHEEEC
Confidence            57899999999999999999999999963 224789999998  899999999999864

>1wi7_A SH3-domain kinase binding protein 1; beta barrel, SH3KBP1, RUK, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}

Probab=99.43  E-value=5.4e-14  Score=102.18  Aligned_cols=58  Identities=36%  Similarity=0.723  Sum_probs=52.6

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|+|.++.++||+|++||+|.|+.  ..+++||.|+.+|+.||||++||+.+..
T Consensus         7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~--~~~~~Ww~g~~~g~~G~~P~~yv~~~~~   64 (68)
T 1wi7_A            7 GRRCQVAFSYLPQNDDELELKVGDIIEVVG--EVEEGWWEGVLNGKTGMFPSNFIKELSG   64 (68)
T ss_dssp             CCCEEESSCBCCSSTTBCCBCTTCEECCCE--EEETTEEEECSTTCCEEEETTSEEECCS
T ss_pred             CCEEEECccCCcCCCCCccCcCCCEEEEEE--cCCCCeEEEEECCcEEEEchHHEEECCC
Confidence            467999999999999999999999999964  3578999999999999999999999874

>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel, beta sheet, zinc finger, metal binding protein; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A

Probab=99.43  E-value=1.5e-13  Score=100.67  Aligned_cols=61  Identities=30%  Similarity=0.574  Sum_probs=53.0

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEE-eeCceeeecccceeecCCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE-LRGQTGWFPESYVEPCDET  229 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~-~~g~~G~fP~~yve~~~~~  229 (336)
                      ...++|+|+|.++.++||+|++||+|.|+.....++|||.|+ .+|+.||||++||+.+...
T Consensus         6 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~~~   67 (71)
T 1u5s_A            6 LHVVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVVLSDG   67 (71)
T ss_dssp             SSEEEESSCCCCCSSSBCCCCSSCCEEEEECCCTTTCEEEEEETTTEEEEEETTSEEECCCS
T ss_pred             cEEEEEcccCCCCCCCcccCCCCCEEEEEECCCCCCCCEEEEeCCCCEEEEeHHHEEECCCC
Confidence            467999999999999999999999999964322678999997 6899999999999998743

>2lj0_A Sorbin and SH3 domain-containing protein 1; R85FL, ponsin, CAP, signaling protein; NMR {Homo sapiens} PDB: 2lj1_A

Probab=99.43  E-value=3.4e-13  Score=97.11  Aligned_cols=54  Identities=26%  Similarity=0.392  Sum_probs=45.0

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEe--CCceeEeeCCCeeecC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPCD  317 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~--~G~~G~fPsnyV~~i~  317 (336)
                      ..|.+++.+...++                 |+|++||+|.|+++.+++||.|+.  +|++||||+|||+++.
T Consensus         9 ~~Alydy~a~~~~E-----------------Ls~~~Gd~i~v~~~~~~gWw~g~~~~~g~~G~~P~nyVe~l~   64 (65)
T 2lj0_A            9 YQALYSYIPQNDDE-----------------LELRDGDIVDVMEKCDDGWFVGTSRRTKQFGTFPGNYVKPLY   64 (65)
T ss_dssp             EEESSCBCCSSTTB-----------------CCBCTTCEEEEEEECTTSEEEEEETTTCCEEEEETTSEEECC
T ss_pred             EEEceeECCCCcCC-----------------cCCCCCCEEEEeEeCCCCEEEEEECCCCCEEEEehhHeEEEe
Confidence            45666676666555                 459999999999999999999986  6999999999999873

>1uhf_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.43  E-value=1.1e-13  Score=101.00  Aligned_cols=58  Identities=33%  Similarity=0.686  Sum_probs=52.3

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  229 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~~  229 (336)
                      ...++|+|+|.++.++||+|++||+|.|+..   +++||.|+.+|+.||||++||+.+...
T Consensus         8 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~---~~~Ww~g~~~g~~G~~P~~yv~~~~~~   65 (69)
T 1uhf_A            8 GEEYIALYPYSSVEPGDLTFTEGEEILVTQK---DGEWWTGSIGDRSGIFPSNYVKPKDSG   65 (69)
T ss_dssp             SEEEECSSCBCCSSSSBCCBCTTCEEEECEE---ETTEEEECSTTCCEEECGGGCEECCCC
T ss_pred             CCEEEEeeeECCCCcCccCCCCCCEEEEEEe---CCCEEEEEeCCcEEEEchHHeEECCCC
Confidence            4689999999999999999999999999643   689999999999999999999988743

>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold protein 1, islet-brain-1, IB-1, mitogen-activated P kinase 8-interacting protein 1; 3.00A {Rattus norvegicus}

Probab=99.43  E-value=1.4e-13  Score=100.91  Aligned_cols=58  Identities=33%  Similarity=0.534  Sum_probs=51.6

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEE--eeCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE--LRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~--~~g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|+|.++.++||+|++||+|.|+  ...++|||.|+  .+|+.|+||++||+.+..
T Consensus         6 ~~~~~al~~y~~~~~~eLs~~~Gd~i~v~--~~~~~gW~~g~~~~~g~~G~fP~~yv~~~~~   65 (71)
T 2fpf_A            6 EQTHRAIFRFVPRHEDELELEVDDPLLVE--LQAEDYWYEAYNMRTGARGVFPAYYAIEVTK   65 (71)
T ss_dssp             CCCEEECSCBCCSSTTBCCBCTTCEEEEE--EECTTSEEEEEETTTTEEEEEEGGGEEECC-
T ss_pred             CeEEEECeeECccCCCcccCcCCcEEEEe--EecCCCEEEEEECCCCCEEEeehHHEEECCC
Confidence            35789999999999999999999999995  45778999999  579999999999999864

>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.43  E-value=5.2e-13  Score=102.07  Aligned_cols=60  Identities=28%  Similarity=0.344  Sum_probs=52.7

Q ss_pred             cceeeeeeeeccc--CCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCCC
Q psy7077         168 EYRRYRAIYEFVS--RNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  229 (336)
Q Consensus       168 ~~~~~~al~df~a--~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~~  229 (336)
                      ....++|+|+|.+  +..+||+|++||+|.|+.  ..++|||.|+++|+.||||++||+.+...
T Consensus        15 ~~~~~~alydy~~~a~~~~eLsf~~Gd~i~v~~--~~~~~Ww~g~~~g~~G~fP~~yv~~~~~~   76 (88)
T 2dbk_A           15 GPVFAKAIQKRVPCAYDKTALALEVGDIVKVTR--MNINGQWEGEVNGRKGLFPFTHVKIFDPQ   76 (88)
T ss_dssp             CCEEEEECSCBCCCTTCSSBCCBCTTCEEEEEE--ECTTSCEEEECSSCEEEECTTTEEECCSS
T ss_pred             CCEEEEEcccccCCCCCCCcccCCCCCEEEEEE--ecCCCEEEEEeCCCEEEEehHHeEECCCC
Confidence            3467999999994  499999999999999964  46889999999999999999999998743

>1uhc_A KIAA1010 protein; beta barrel, SH3, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.43  E-value=3.4e-13  Score=100.91  Aligned_cols=60  Identities=25%  Similarity=0.566  Sum_probs=52.0

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeec--CCCCeEEEEeeCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQN--AEPGWLAGELRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~--~~~gW~~g~~~g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|+|.++..+||+|++||+|.|+....  .+++||.|+.+|+.||||++||+.+..
T Consensus        13 ~~~~~Alydy~~~~~~eLs~~~Gd~i~vl~~~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~   74 (79)
T 1uhc_A           13 NQVYFAVYTFKARNPNELSVSANQKLKILEFKDVTGNTEWWLAEVNGKKGYVPSNYIRKTES   74 (79)
T ss_dssp             SCCEEESSCBCCCSSSBCCBCTTCEEEEEESCCTTSCTTEEEEESSSCEEEEEGGGEEECCS
T ss_pred             CeEEEECccCCCCCCCccCCCCCCEEEEEECCCCCCCCCeEEEEeCCCEEEEchHHeEECCC
Confidence            467999999999999999999999999964311  138999999999999999999999764

>4glm_A Dynamin-binding protein; SH3 domain, DNMBP, structural genomics, structural genomics consortium, SGC, SRC homology 3 domains, cell junctions; 1.90A {Homo sapiens}

Probab=99.42  E-value=2e-13  Score=100.10  Aligned_cols=58  Identities=38%  Similarity=0.714  Sum_probs=52.3

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|||.++..+||+|++||+|.|+  ...++|||.|+.+|+.||||++||+.+++
T Consensus        13 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~--~~~~~~W~~g~~~g~~G~~P~~yv~~~~~   70 (72)
T 4glm_A           13 LTYGVALYRFQALEPNELDFEVGDKIRIL--ATLEDGWLEGSLKGRTGIFPYRFVKLCPA   70 (72)
T ss_dssp             CCEEEESSCBCCCSTTBCCBCTTCEEEEE--EECSTTEEEEEETTEEEEEEGGGEEEEC-
T ss_pred             CeEEEECccCCCCCCCcCCCCCCCEEEEE--EccCCCEEEEEECCcEEEEChHHeEECCC
Confidence            46799999999999999999999999996  44678999999999999999999999864

>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A

Probab=99.42  E-value=2.2e-13  Score=95.60  Aligned_cols=53  Identities=34%  Similarity=0.807  Sum_probs=48.1

Q ss_pred             eeeeeeec-ccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEee--Cceeeecccceee
Q psy7077         171 RYRAIYEF-VSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR--GQTGWFPESYVEP  225 (336)
Q Consensus       171 ~~~al~df-~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~--g~~G~fP~~yve~  225 (336)
                      .++|+|+| .++.++||+|++||+|.|+.  ..++|||.|+..  |+.||||++||++
T Consensus         2 ~~~al~d~~~~~~~~eLs~~~Gd~i~v~~--~~~~gW~~g~~~~~g~~G~~P~~yv~~   57 (58)
T 1zuy_A            2 MFEAAYDFPGSGSPSELPLKKGDVIYITR--EEPSGWSLGKLLDGSKEGWVPTAYMKP   57 (58)
T ss_dssp             EEEESSCBCCCSCTTBCCBCTTCEEEEEE--ECTTSEEEEEESSCSCEEEEEGGGEEC
T ss_pred             EEEEecccCCCCCCCcCCCCCCCEEEEEE--ecCCCeEEEEECCCCCEEEecHHHEEE
Confidence            58999999 89999999999999999964  467899999986  9999999999985

>2cub_A Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor, tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.42  E-value=3.2e-13  Score=103.27  Aligned_cols=59  Identities=29%  Similarity=0.633  Sum_probs=53.4

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  229 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~~  229 (336)
                      ...++|+|+|.++.++||+|++||+|.|+.  +.+++||+|+++|+.||||++||+.+...
T Consensus        17 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~--~~~~gWw~g~~~g~~G~~P~~yv~~~~~~   75 (88)
T 2cub_A           17 NMPAYVKFNYMAEREDELSLIKGTKVIVME--KCSDGWWRGSYNGQVGWFPSNYVTEEGDS   75 (88)
T ss_dssp             CEEEEESSCCCCCSTTBCCCCTTEEEEEEE--ECTTSEEEEEETTEEEEEEGGGEEECCCC
T ss_pred             CCEEEEccccCCCCCCCcCCCCCCEEEEEE--ccCCCeEEEEECCcEEEEehHHEEECCCc
Confidence            467999999999999999999999999964  46789999999999999999999998754

>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=2.5e-13  Score=101.66  Aligned_cols=58  Identities=34%  Similarity=0.637  Sum_probs=52.8

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|+|.++..+||+|++||+|.|+  ...+++||.|+.+|+.||||++||+.+..
T Consensus        17 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~--~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~   74 (79)
T 1x69_A           17 GITAVALYDYQAAGDDEISFDPDDIITNI--EMIDDGWWRGVCKGRYGLFPANYVELRQS   74 (79)
T ss_dssp             CCCEEESSCCCCSSSSBCCCCTTCEEEEE--EECSSSEEEEEETTEEEEEETTSEEECCC
T ss_pred             CeEEEECccCCCCCCCCcCcCCCCEEEEe--EecCCCeEEEEECCcEEEechHHEEECCC
Confidence            46799999999999999999999999996  44678999999999999999999999874

>2csi_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=2.1e-13  Score=101.37  Aligned_cols=59  Identities=39%  Similarity=0.634  Sum_probs=51.3

Q ss_pred             ceeeeeeeecccCC-------CCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRN-------GDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~-------~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|+|.++.       .+||+|++||+|.|+.. .+.+|||.|+.+|+.||||++||+.+..
T Consensus         7 ~~~~~Al~dy~~~~~~~~~~~~~eLsf~~Gd~i~v~~~-~~~~gWw~g~~~g~~G~~P~~yv~~~~~   72 (76)
T 2csi_A            7 GRRMVALYDYDPRESSPNVDVEAELTFCTGDIITVFGE-IDEDGFYYGELNGQKGLVPSNFLEEVSG   72 (76)
T ss_dssp             SEEEECSSCCCTTTTSCSSSTTTSCCCCTTCEEEEESS-CCSSSEEEEEETTEEEEEEGGGCCBCCC
T ss_pred             ccEEEEcccCCCCCcccCCCCCCcccCCCCCEEEEeEe-cCCCCeEEEEECCcEEEEehHHEEECCC
Confidence            46799999999998       99999999999999632 2335899999999999999999998864

>2kxc_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 1; IRTKS-SH3, espfu, complex structure, protein binding; NMR {Homo sapiens}

Probab=99.42  E-value=2.3e-13  Score=98.47  Aligned_cols=58  Identities=33%  Similarity=0.704  Sum_probs=51.0

Q ss_pred             ceeeeeeeeccc-CCCCCCCCCCCCEEEEeeeecCCCCeEEEEee--CceeeecccceeecC
Q psy7077         169 YRRYRAIYEFVS-RNGDELSFQPGDIIMVPVKQNAEPGWLAGELR--GQTGWFPESYVEPCD  227 (336)
Q Consensus       169 ~~~~~al~df~a-~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~--g~~G~fP~~yve~~~  227 (336)
                      ...++|+|+|.+ +.++||+|++||+|.|+.. ..++|||.|+..  |+.||||++||+.+.
T Consensus         6 ~~~~~al~dy~a~~~~~eLs~~~Gd~i~v~~~-~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~   66 (67)
T 2kxc_A            6 KQKVKTIFPHTAGSNKTLLSFAQGDVITLLIP-EEKDGWLYGEHDVSKARGWFPSSYTKLLE   66 (67)
T ss_dssp             CCEEEESSCBCCSSCSSBCCBCTTCEEEESSS-SCBTTEEEEEESSSCCEEEEEGGGEEESC
T ss_pred             CEEEEEeecCCCCCCCCCCcCCCCCEEEEeEC-CCCCCcEEEEECCCCCEEEEehHHeEECC
Confidence            367999999996 9999999999999999631 367899999987  999999999999875

>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens}

Probab=99.42  E-value=2e-13  Score=99.34  Aligned_cols=57  Identities=32%  Similarity=0.613  Sum_probs=51.4

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe-eCceeeecccceeecC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL-RGQTGWFPESYVEPCD  227 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~-~g~~G~fP~~yve~~~  227 (336)
                      ...++|+|+|.++..++|+|++||+|.|+  ...++|||.|+. +|+.||||++||++..
T Consensus         6 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~--~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~   63 (69)
T 4esr_A            6 APTVVALYDYTANRSDELTIHRGDIIRVF--FKDNEDWWYGSIGKGQEGYFPANHVASET   63 (69)
T ss_dssp             CCEEEESSCBCCCSTTBCCBCTTCEEEEE--EECSSSEEEEEEETTEEEEEEGGGEEEHH
T ss_pred             cCEEEECccCCCCCcCcCCCCCCCEEEEE--EecCCCeEEEEeCCCCEEEEchHHeEECc
Confidence            46799999999999999999999999996  446789999998 8999999999999764

>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A

Probab=99.42  E-value=2e-13  Score=97.64  Aligned_cols=57  Identities=39%  Similarity=0.847  Sum_probs=49.6

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe--eCceeeecccceeecC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPCD  227 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~--~g~~G~fP~~yve~~~  227 (336)
                      ...++|+|+|.++.++||+|++||+|.|+  ...+++||.|+.  +|+.||||++||+.++
T Consensus         6 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~--~~~~~~W~~g~~~~~g~~G~~P~~yv~~~~   64 (64)
T 4f14_A            6 LRTYRAMYDYSAQDEDEVSFRDGDYIVNV--QPIDDGWMYGTVQRTGRTGMLPANYIEFVN   64 (64)
T ss_dssp             --CEEESSCBCCCSTTBCCBCTTCEEEEE--EECSSSEEEEEETTTTEEEEEEGGGEEEC-
T ss_pred             CEEEEECeeeCCcCCCcCCCCCCCEEEEE--EeCCCCeEEEEECCCCCEEEEeHHHeEECc
Confidence            45789999999999999999999999995  446789999998  8999999999999763

>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A

Probab=99.42  E-value=2.5e-13  Score=98.36  Aligned_cols=58  Identities=26%  Similarity=0.516  Sum_probs=51.7

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeC--ceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRG--QTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g--~~G~fP~~yve~~~~  228 (336)
                      ...++|+|+|.++.++||+|++||+|.|+.  ..+++||.|++.+  +.||||++||+.+..
T Consensus         6 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~--~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~~   65 (67)
T 2o9s_A            6 TGEAIAKFNFNGDTQVEMSFRKGERITLLR--QVDENWYEGRIPGTSRQGIFPITYVDVIKR   65 (67)
T ss_dssp             SEEEEECSCBCCSSTTBCCBCTTCEEEEEE--ECSSSEEEEECTTSSCEEEEEGGGEEEEEC
T ss_pred             CEEEEECccCCcCCcCccCCCCCCEEEEEE--ecCCCEEEEEECCCCCEEEEChHHeEECCC
Confidence            467999999999999999999999999964  4678999999865  999999999998763

>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens}

Probab=99.42  E-value=2.8e-13  Score=98.46  Aligned_cols=58  Identities=26%  Similarity=0.495  Sum_probs=51.8

Q ss_pred             cceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEE-eeCceeeecccceeecCC
Q psy7077         168 EYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE-LRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       168 ~~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~-~~g~~G~fP~~yve~~~~  228 (336)
                      ....++|+|+|.++.++||+|++||+|.|+.  + +++||.|+ .+|+.||||++||+.+..
T Consensus         6 ~~~~~~alydy~~~~~~eLs~~~Gd~i~v~~--~-~~~Ww~~~~~~g~~G~~P~~yv~~~~~   64 (68)
T 1wxt_A            6 SGLKMQVLYEFEARNPRELTVVQGEKLEVLD--H-SKRWWLVKNEAGRSGYIPSNILEPLSG   64 (68)
T ss_dssp             CCEEEEESSCBCCCSSSBCCBCTTCEEEEEE--C-SSSEEEEECTTSCEEEEEGGGEECCCC
T ss_pred             CCeEEEECceECCCCcCcCCCCCCCEEEEEE--c-CCCEEEEEECCCCEEEEEhHHcEECCC
Confidence            3567999999999999999999999999964  3 48999999 789999999999998864

>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1

Probab=99.42  E-value=1.7e-13  Score=96.24  Aligned_cols=54  Identities=28%  Similarity=0.646  Sum_probs=47.6

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCC-CCeEEEEe--eCceeeecccceee
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAE-PGWLAGEL--RGQTGWFPESYVEP  225 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~-~gW~~g~~--~g~~G~fP~~yve~  225 (336)
                      .+++|+|+|.++.++||+|++||+|.|+.  ..+ +|||.|+.  +|+.||||++||+.
T Consensus         2 ~~~~alydy~~~~~~eLs~~~Gd~i~v~~--~~~~~~W~~g~~~~~g~~G~~P~~yv~~   58 (58)
T 1zuu_A            2 MENKVLYAYVQKDDDEITITPGDKISLVA--RDTGSGWTKINNDTTGETGLVPTTYIRI   58 (58)
T ss_dssp             -CCEECSCBCCCSTTBCCBCTTCCEEEEE--CCSSSSEEEEEETTTTEEEEEEGGGEEC
T ss_pred             CEEEEeeeECCcCCCcccCCCCCEEEEeE--cCCCCCCEEEEECCCCCEEEEEHHHEEC
Confidence            46899999999999999999999999963  344 79999998  89999999999973

>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal transduction, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}

Probab=99.42  E-value=3.1e-13  Score=103.93  Aligned_cols=61  Identities=30%  Similarity=0.574  Sum_probs=53.4

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEE-eeCceeeecccceeecCCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE-LRGQTGWFPESYVEPCDET  229 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~-~~g~~G~fP~~yve~~~~~  229 (336)
                      ...++|+|+|.++..+||+|++||+|.|+.....+++||+|+ .+|+.||||++||+.+...
T Consensus        17 ~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~~~   78 (91)
T 1wx6_A           17 LHVVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVVLSDG   78 (91)
T ss_dssp             CEEEEESSCCCCSSSSBCCCCTTCEEEEEECCSSCTTEEEEECTTCCEEEEEGGGEEEEEES
T ss_pred             cEEEEEeecCCcCCCCcccCCCCCEEEEEECCCCCCCcEEEEeCCCCEEEEchHHEEECCCc
Confidence            467999999999999999999999999964322578999998 6899999999999998754

>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae}

Probab=99.42  E-value=1.9e-13  Score=96.30  Aligned_cols=55  Identities=35%  Similarity=0.682  Sum_probs=49.5

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEee--Cceeeecccceeec
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR--GQTGWFPESYVEPC  226 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~--g~~G~fP~~yve~~  226 (336)
                      ..++|+|+|.++.++||+|++||+|.|+.  ..++|||.|+..  |+.||||++||+.+
T Consensus         2 ~~~~al~d~~~~~~~eLs~~~Gd~i~v~~--~~~~gW~~g~~~~~g~~G~~P~~yv~~~   58 (59)
T 1yn8_A            2 QRAVALYDFEPENDNELRLAEGDIVFISY--KHGQGWLVAENESGSKTGLVPEEFVSYI   58 (59)
T ss_dssp             EEEEECSCBCCCSTTBCCBCTTCEEEEEE--EEETTEEEEECTTSSCEEEEEGGGEEEC
T ss_pred             CEEEECccCCCCCCCCcCCCCCCEEEEEE--cCCCCeEEEEECCCCCEEEEehHHeEEC
Confidence            46899999999999999999999999964  467899999974  89999999999876

>1spk_A RSGI RUH-010, riken cDNA 1300006M19; structural genomics, SH3 domain, five-stranded barrel, mouse cDNA; NMR {Mus musculus} SCOP: b.34.2.1

Probab=99.42  E-value=2.6e-13  Score=99.63  Aligned_cols=59  Identities=31%  Similarity=0.662  Sum_probs=52.0

Q ss_pred             ceeeeeeeeccc-CCCCCCCCCCCCEEEEeeeecCCCCeEEEEee--CceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVS-RNGDELSFQPGDIIMVPVKQNAEPGWLAGELR--GQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a-~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~--g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|+|.+ +.++||+|++||+|.|+. ...+++||.|++.  |+.||||++||+.+..
T Consensus         7 ~~~~~al~dy~a~~~~~eLs~~~Gd~i~v~~-~~~~~gWw~g~~~~~g~~G~fP~~yv~~~~~   68 (72)
T 1spk_A            7 GQKVKTIFPHTAGNNKTLLSFAQGDVLTLLI-PEEKDGWLYGEHDTTKARGWFPSSYTKLLSG   68 (72)
T ss_dssp             SCEEECSSCBCCSSCSSBCCBCTTCEEEECC-SSCBTTEEEEEETTTCCEEEEEGGGCEECSS
T ss_pred             ceEEEEeeeeCCCCCCCCCcCCCCCEEEEeE-ccCCCCcEEEEECCCCCEEEEehHHeEECCC
Confidence            467999999996 899999999999999963 2267899999987  9999999999999874

>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A

Probab=99.41  E-value=2.7e-13  Score=96.61  Aligned_cols=55  Identities=18%  Similarity=0.414  Sum_probs=48.8

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEE--eeCceeeecccceeec
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE--LRGQTGWFPESYVEPC  226 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~--~~g~~G~fP~~yve~~  226 (336)
                      ...++|+|+|.++.++||+|++||+|.|+.  . +++||.|+  .+|+.||||++||+++
T Consensus         6 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~--~-~~~Ww~g~~~~~g~~G~~P~~yv~~~   62 (62)
T 2iim_A            6 DNLVIALHSYEPSHDGDLGFEKGEQLRILE--Q-SGEWWKAQSLTTGQEGFIPFNFVAKA   62 (62)
T ss_dssp             TCEEEESSCBCCCSTTBCCBCTTCEEEEEE--C-CSSEEEEEETTTCCEEEEEGGGEEEC
T ss_pred             CcEEEEcccCCCCCCCCcCCCCCCEEEEEE--c-CCCEEEEEECCCCCEEEEEHHHEEEC
Confidence            467999999999999999999999999964  3 35999999  4899999999999864

>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}

Probab=99.41  E-value=1.7e-13  Score=100.85  Aligned_cols=55  Identities=38%  Similarity=0.797  Sum_probs=50.1

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceee
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP  225 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~  225 (336)
                      ...++|+|+|.++.++||+|++||+|.|+.  ..++|||.|+.+|+.||||++||++
T Consensus        17 ~~~~~Alydy~a~~~~eLsf~~Gd~i~Vl~--~~~~gWw~g~~~g~~G~fP~~yV~~   71 (72)
T 2l0a_A           17 ARKVRAIYDFEAAEDNELTFKAGEIITVLD--DSDPNWWKGETHQGIGLFPSNFVTA   71 (72)
T ss_dssp             CEEEEESSCBCCSSTTBCCBCTTCEEEEEE--EEETTEEEEECSSCEEECTTCCEEE
T ss_pred             CeEEEECCccCCCCCCccCCCCCCEEEEEE--ecCCCEEEEEECCCEEEechhhCcc
Confidence            467999999999999999999999999964  4578999999999999999999975

>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A

Probab=99.41  E-value=3.1e-13  Score=96.39  Aligned_cols=58  Identities=26%  Similarity=0.609  Sum_probs=51.4

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD  227 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~  227 (336)
                      ...++|+|+|.++.++||+|++||+|.|+.. ..+.+||.|+.+|+.||||++||++++
T Consensus         5 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~~W~~~~~~g~~G~~P~~yv~~~~   62 (63)
T 3eg3_A            5 PNLFVALYDFVASGDNTLSITKGEKLRVLGY-NHNGEWCEAQTKNGQGWVPSAYITPVN   62 (63)
T ss_dssp             TTEEEESSCBCCCSSSBCCBCTTCEEEEEEE-CTTSSEEEEEETTEEEEEEGGGEEESC
T ss_pred             CEEEEEcceECCCCCCccCCCCCCEEEEEEe-CCCCCeEEEEECCCeEEEehHHeEECC
Confidence            4578999999999999999999999999642 456779999999999999999999875

>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.41  E-value=5e-13  Score=102.11  Aligned_cols=58  Identities=33%  Similarity=0.692  Sum_probs=52.9

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|||.++..+||+|++||+|.|+  ...+++||.|++.|+.||||++||+.+..
T Consensus        17 ~~~~~Alydy~~~~~~eLsf~~Gd~i~v~--~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~   74 (88)
T 1x2q_A           17 ARKVRALYDFEAVEDNELTFKHGEIIIVL--DDSDANWWKGENHRGIGLFPSNFVTTNLN   74 (88)
T ss_dssp             CEEEEESSCCCCCSSSCCCCCSSCEEEEE--ECSCSSSEEEEETTEEEEECGGGEESCSS
T ss_pred             CeEEEEcccCCCCCcCccCCCCCCEEEEE--EeCCCCEEEEEECCcEEEEehHHEEEcCC
Confidence            56799999999999999999999999996  45678999999999999999999998764

>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} SCOP: b.34.2.1 PDB: 3h0i_A 3h0f_A*

Probab=99.41  E-value=3.2e-13  Score=99.35  Aligned_cols=57  Identities=30%  Similarity=0.688  Sum_probs=51.2

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe--eCceeeecccceeecC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPCD  227 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~--~g~~G~fP~~yve~~~  227 (336)
                      ...++|+|+|.++..+||+|++||+|.|+  ...+++||.|+.  +|+.||||++||++++
T Consensus        15 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~--~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~   73 (73)
T 3h0h_A           15 VTLFVALYDYEAITEDDLSFHKGEKFQIL--NSSEGDWWEARSLTTGETGYIPSNYVAPVD   73 (73)
T ss_dssp             TCEEEESSCBCCSSTTBCCBCTTCEEEEE--ECSSSSEEEEEETTTCCEEEEEGGGEEECC
T ss_pred             CEEEEECccCCCCCCCcceEeCCCEEEEE--EecCCCeEEEEECCCCCEEEEEHHHeEECC
Confidence            46789999999999999999999999995  446789999998  8999999999999863

>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.41  E-value=2.6e-13  Score=98.84  Aligned_cols=58  Identities=29%  Similarity=0.628  Sum_probs=51.6

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCce-eeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQT-GWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~-G~fP~~yve~~~~  228 (336)
                      ...++|+|+|.++.++||+|++||+|.|+  ...+++||.|++.+.. ||||++||+.+..
T Consensus         7 ~~~~~alydy~~~~~~eLs~~~Gd~i~v~--~~~~~~Ww~g~~~~~~~G~~P~~yv~~~~~   65 (69)
T 2eqi_A            7 GRTVKALYDYKAKRSDELTFCRGALIHNV--SKEPGGWWKGDYGTRIQQYFPSNYVEDISG   65 (69)
T ss_dssp             CCEEEESSCBCCCSSSCCCBCTTCEEESC--CCCSSSCEEEEETTEEEEEECGGGEEECCS
T ss_pred             CcEEEECeeECCCCcCccCCCCCCEEEEE--EcCCCCeEEEEECCCCEEEEchHHcEECcc
Confidence            46799999999999999999999999996  3467899999987766 9999999999864

>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum}

Probab=99.41  E-value=6.9e-13  Score=99.53  Aligned_cols=61  Identities=21%  Similarity=0.243  Sum_probs=49.6

Q ss_pred             ccccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCC-eEEEEeCCceeEeeCCCeeecCCCCCC
Q psy7077         245 LELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPG-WLAGELRGQTGWFPESYVEPCDETGEV  322 (336)
Q Consensus       245 ~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~-W~~g~~~G~~G~fPsnyV~~i~~~~~~  322 (336)
                      ....+.+++.+...++                 |+|++||+|.|+++.+++ ||.|+++|++||||+|||+.+......
T Consensus        11 ~~~~alydy~~~~~~e-----------------Lsf~~Gd~i~v~~~~~~~gWw~g~~~g~~G~fP~~yv~~~~~~~~~   72 (80)
T 2i0n_A           11 KYARALKDYNVSDTSL-----------------LPFKRNDIITITFKDQENKWFMGQLNGKEGSFPVDHVEILLSDVPP   72 (80)
T ss_dssp             CEEEESSCBCCCSSSS-----------------CCBCSSEEEEEEEESSSSSEEEEEETTEEEEEEGGGEEEESSCCCC
T ss_pred             eEEEECCCCCcCCCCC-----------------cCCCCCCEEEEEEecCCCCEEEEEECCcEEEechHHEEECCCCCCC
Confidence            3456667777666555                 459999999999998777 999999999999999999999765443

>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.41  E-value=5.6e-13  Score=99.90  Aligned_cols=59  Identities=31%  Similarity=0.638  Sum_probs=52.0

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEee-----CceeeecccceeecCCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR-----GQTGWFPESYVEPCDET  229 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~-----g~~G~fP~~yve~~~~~  229 (336)
                      ...++|+|+|.++.++||+|++||+|.|+.  ..+++||.|++.     |+.||||++||+.+...
T Consensus         7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~--~~~~gWw~g~~~~~g~~~~~G~fP~~yv~~~~~~   70 (80)
T 1ue9_A            7 GEIAQVTSAYVASGSEQLSLAPGQLILILK--KNTSGWWQGELQARGKKRQKGWFPASHVKLLGPS   70 (80)
T ss_dssp             CEEEEECSCCCCCSTTBCCCCTTCEEEEEE--ECSSSEEEEEECSCCSSCCEEEEETTSEEECCSC
T ss_pred             CeEEEECcccCCCCCCCCCCCCCCEEEEEE--ecCCCcEEEEECCCCCCCcEEEEchHHeEECCCC
Confidence            457999999999999999999999999964  467899999976     48999999999998754

>1gbq_A GRB2; complex (signal transduction/peptide), SH3 domain; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 1gbr_A 2gbq_A 3gbq_A 4gbq_A

Probab=99.41  E-value=2.1e-13  Score=100.75  Aligned_cols=59  Identities=34%  Similarity=0.635  Sum_probs=51.1

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|+|.++.++||+|++||+|.|+.. ..+++||.|+.+|+.||||++||+.+..
T Consensus         9 ~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~-~~~~~Ww~g~~~g~~G~~P~~yv~~~~~   67 (74)
T 1gbq_A            9 SMEAIAKYDFKATADDELSFKRGDILKVLNE-ECDQNWYKAELNGKDGFIPKNYIEMKPH   67 (74)
T ss_dssp             -CEEEESSCBCCSSTTBCCBCTTCEEECCBC-SSCSSEEEEEETTEEEEEEGGGEEEEC-
T ss_pred             CeEEEECccCCCCCCCeeeEcCCCEEEEeEe-cCCCCEEEEEECCCEEEEehHhEEEcCC
Confidence            4679999999999999999999999999642 2367899999999999999999998753

>1j3t_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.41  E-value=3.5e-13  Score=99.54  Aligned_cols=58  Identities=31%  Similarity=0.664  Sum_probs=52.1

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  229 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~~  229 (336)
                      ...++|+|+|.++.++||+|++||+|.|+..   +++||.|+++|+.||||++||+.+...
T Consensus        10 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~---~~~Ww~g~~~g~~G~~P~~yv~~~~~~   67 (74)
T 1j3t_A           10 NLKAQALCSWTAKKDNHLNFSKHDIITVLEQ---QENWWFGEVHGGRGWFPKSYVKIIPGS   67 (74)
T ss_dssp             CCEEEESSCBCCCSTTBCCBCTTCEEEEEEE---CSSEEEEESTTCCCEEEGGGEEECCCS
T ss_pred             CeEEEECCCCCCCCCCccCCCCCCEEEEEec---CCCEEEEEECCcEEEEchHHeEECCCC
Confidence            4679999999999999999999999999743   468999999999999999999998753

>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2js2_A

Probab=99.41  E-value=2e-13  Score=98.98  Aligned_cols=58  Identities=19%  Similarity=0.336  Sum_probs=49.5

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEE-eeCceeeecccceeecCCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE-LRGQTGWFPESYVEPCDET  229 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~-~~g~~G~fP~~yve~~~~~  229 (336)
                      ...++|+|||.++.++||+|++||+|.|+.  + ++|||.|+ .+|+.||||+|||+.+.+.
T Consensus         4 ~~~~~Alydy~a~~~~ELsf~~Gd~i~vl~--~-~~~Ww~~~~~~g~~G~~Psnyv~~~~~~   62 (67)
T 2b86_A            4 EVIVIAKWDYTAQQDQELDIKKNERLWLLD--D-SKTWWRVRNAANRTGYVPSNYVERKLEH   62 (67)
T ss_dssp             CEEEEESSCBCCSSTTSCCBCTTCEEEEEE--C-SSSSCEEECTTSCEEECCCCSEEEC---
T ss_pred             CeEEEEeeeECCCCCCccccCCCCEEEEEe--c-CCCeEEEEeCCCCEEEeChHHEeEcCCC
Confidence            467899999999999999999999999964  3 47999999 4899999999999987743

>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain, signaling protein; NMR {Homo sapiens}

Probab=99.41  E-value=4.7e-13  Score=98.38  Aligned_cols=59  Identities=20%  Similarity=0.385  Sum_probs=52.0

Q ss_pred             cceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe-eCceeeecccceeecCCC
Q psy7077         168 EYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL-RGQTGWFPESYVEPCDET  229 (336)
Q Consensus       168 ~~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~-~g~~G~fP~~yve~~~~~  229 (336)
                      ....++|+|+|.++.++||+|++||+|.|+.  + +++||.|+. +|+.||||++||+.+...
T Consensus         6 ~~~~~~alydy~~~~~~eLs~~~Gd~i~v~~--~-~~~Ww~g~~~~g~~G~~P~~yv~~~~~~   65 (72)
T 2jw4_A            6 EEVVVVAKFDYVAQQEQELDIKKNERLWLLD--D-SKSWWRVRNSMNKTGFVPSNYVERKNSA   65 (72)
T ss_dssp             CCEEEECSSCCCCSSTTSCCCCTTCEEEEEE--C-SSSSEEEECTTSCEEEECTTSCEECCCC
T ss_pred             CCeEEEECcCCCcCCCCcccCCCCCEEEEEE--C-CCCEEEEEECCCCEEEEEhhHEEEcCCC
Confidence            3468999999999999999999999999964  3 579999995 899999999999998643

>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens}

Probab=99.41  E-value=2.4e-13  Score=98.70  Aligned_cols=57  Identities=28%  Similarity=0.680  Sum_probs=51.5

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEE-eeCceeeecccceeecC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE-LRGQTGWFPESYVEPCD  227 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~-~~g~~G~fP~~yve~~~  227 (336)
                      ...++|+|+|.++.++||+|++||+|.|+  ...++|||.|+ .+|+.||||++||+.++
T Consensus        10 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~--~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~   67 (68)
T 1s1n_A           10 GEEYIAVGDFTAQQVGDLTFKKGEILLVI--EKKPDGWWIAKDAKGNEGLVPRTYLEPYS   67 (68)
T ss_dssp             CEEEEECSCBCCSSSSCCCBCSSEEEEEC--SCCSSSEEEEECSSSCEEEEESTTEEECC
T ss_pred             CCEEEEcccCCCCCCCcCCCCCCCEEEEE--EcCCCCeEEEEECCCCEEEEehHHeEECc
Confidence            46789999999999999999999999996  34678999999 68999999999999875

>1ujy_A RHO guanine nucleotide exchange factor 6; structural genomics, SH3 domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.41  E-value=1e-13  Score=102.96  Aligned_cols=58  Identities=43%  Similarity=0.769  Sum_probs=52.8

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|+|.++..+||+|++||+|.|+  ...+++||.|+++|+.||||++||+.+..
T Consensus        10 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~--~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~   67 (76)
T 1ujy_A           10 QLIVKARFNFKQTNEDELSVCKGDIIYVT--RVEEGGWWEGTLNGRTGWFPSNYVREIKS   67 (76)
T ss_dssp             CEEEECCSCBCCSSTTSCCBCSSCCEEES--SCCSSSCEEEEETTEEEEECTTTSEECCH
T ss_pred             CEEEEECccCCcCCCCcccCCCCCEEEEE--EecCCCEEEEEECCCEEEechHHEEECCc
Confidence            46799999999999999999999999996  44678999999999999999999999864

>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1

Probab=99.41  E-value=2.4e-13  Score=98.45  Aligned_cols=55  Identities=20%  Similarity=0.486  Sum_probs=50.3

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEE-eeCceeeecccceeec
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE-LRGQTGWFPESYVEPC  226 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~-~~g~~G~fP~~yve~~  226 (336)
                      ..++|+|+|.++.++||+|++||+|.|+  ...+++||.|+ .+|+.||||++||+.+
T Consensus         3 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~--~~~~~~Ww~g~~~~g~~G~~P~~yv~~~   58 (67)
T 1gl5_A            3 EIVVAMYDFQATEAHDLRLERGQEYIIL--EKNDLHWWRARDKYGSEGYIPSNYVTGK   58 (67)
T ss_dssp             SCEEECSCBCCSSSSBCCBCTTCEEEEE--ECSSSSEEEEECSSSCEEEEETTSEESS
T ss_pred             eEEEECccCCCCCCCeecCCcCCEEEEE--EccCCCcEEEEECCCCEEEEEhHhEEEc
Confidence            5689999999999999999999999996  44678999999 5899999999999987

>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A

Probab=99.41  E-value=3.2e-13  Score=101.19  Aligned_cols=59  Identities=29%  Similarity=0.685  Sum_probs=51.3

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe--eCceeeecccceeecCCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPCDET  229 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~--~g~~G~fP~~yve~~~~~  229 (336)
                      ...++|+|+|.++.++||+|++||+|.|+  ...++|||.|+.  +|+.||||++||+.+...
T Consensus         5 ~~~~~Alydy~~~~~~eLs~~~Gd~i~vl--~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~~~   65 (79)
T 3cqt_A            5 STLFEALYDYEARTEDDLSFHKGEKFQIL--NSSEGDWWEARSLTTGETGYIPSIYLAPVDRL   65 (79)
T ss_dssp             CCCEEESSCBCCCSTTBCCBCTTCEEEEE--ECTTSSEEEEEETTTCCEEEEEGGGEEEC---
T ss_pred             CcEEEECccCCCCCcCcCCCCCCCEEEEE--EecCCCeEEEEECCCCCEEEeehHHeEECCcc
Confidence            35789999999999999999999999996  456789999998  899999999999998743

>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1

Probab=99.40  E-value=2.7e-13  Score=99.31  Aligned_cols=58  Identities=24%  Similarity=0.531  Sum_probs=50.4

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEE-eeCceeeecccceeecC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE-LRGQTGWFPESYVEPCD  227 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~-~~g~~G~fP~~yve~~~  227 (336)
                      ...++|+|+|.++.++||+|++||+|.|+. ...++|||.|+ .+|+.||||++||+...
T Consensus        11 ~~~~~alydy~~~~~~eLs~~~Gd~i~v~~-~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~   69 (71)
T 1csk_A           11 GTECIAKYNFHGTAEQDLPFCKGDVLTIVA-VTKDPNWYKAKNKVGREGIIPANYVQKRE   69 (71)
T ss_dssp             CEEEEESSCBCCSSTTBCCBCTTCEEEEEE-ECSSTTEEEEECTTSCEEEEETTSEEC--
T ss_pred             CCEEEEceeECcCCCCcCCCCCCCEEEEeE-CCCCCCCEEEEeCCCCEEEEehHHeEEcc
Confidence            467999999999999999999999999964 25678999999 68999999999998754

>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.40  E-value=6.7e-13  Score=98.35  Aligned_cols=57  Identities=23%  Similarity=0.478  Sum_probs=50.4

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe----eCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL----RGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~----~g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|+|.++ ++||+|++||+|.|++  +.++|||.|+.    +|+.||||++||+.+..
T Consensus        10 ~~~~~alydy~~~-~~eLs~~~Gd~i~vl~--~~~~gWw~g~~~~~~~g~~G~~P~~yv~~~~~   70 (75)
T 2egc_A           10 KDVYVSIADYEGD-EETAGFQEGVSMEVLE--RNPNGWWYCQILDGVKPFKGWVPSNYLEKKNS   70 (75)
T ss_dssp             CEEEEECSCBCCC-SSSCCBCTTCEEEECE--ECTTSEEEEEECCSSSCEEEEEEGGGEEECCS
T ss_pred             CeEEEECCCcCCC-CCcCCCCCCCEEEEEE--cCCCCeEEEEeCCCCCCcEEEEehHHCEECCC
Confidence            4679999999999 9999999999999964  46889999997    46899999999999863

>2gqi_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.40  E-value=1.5e-13  Score=100.78  Aligned_cols=58  Identities=33%  Similarity=0.517  Sum_probs=51.8

Q ss_pred             ceeeeeeeeccc-CCCCCCCCCCCCEEEEeeeecCCCCeEEEE--eeCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVS-RNGDELSFQPGDIIMVPVKQNAEPGWLAGE--LRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a-~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~--~~g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|+|.+ +.++||+|++||+|.|+.  ..+++||.|+  .+|+.|+||++||+.+..
T Consensus         7 ~~~~~Alydy~~~~~~~eLsf~~Gd~i~v~~--~~~~~W~~g~~~~~g~~G~~P~~yv~~~~~   67 (71)
T 2gqi_A            7 GRRVRAILPYTKVPDTDEISFLKGDMFIVHN--ELEDGWMWVTNLRTDEQGLIVEDLVEEVSG   67 (71)
T ss_dssp             CCCEEESSCCCCCTTSSCCCCCTTCBCCCCE--ECSSSCEEEECTTTCCEEEECTTSEEECCC
T ss_pred             CCEEEECcccCCCCCCCCCCCCCCCEEEEEE--ecCCCEEEEEECCCCCEEEeeHHHEEECCC
Confidence            467999999999 999999999999999963  4678999999  579999999999999863

>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.40  E-value=4.2e-13  Score=97.91  Aligned_cols=58  Identities=36%  Similarity=0.700  Sum_probs=52.1

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEee--CceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR--GQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~--g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|+|.++.++||+|++||+|.|+.  ..+++||.|+..  |+.||||++||+.+..
T Consensus         7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~--~~~~gW~~g~~~~~g~~G~~P~~yv~~~~~   66 (70)
T 2ct3_A            7 GTPYRAMYQYRPQNEDELELREGDRVDVMQ--QCDDGWFVGVSRRTQKFGTFPGNYVAPVSG   66 (70)
T ss_dssp             CEEEEESSCBCCSSTTBCCBCTTEEEEEEE--ECSSSCEEEEESSSCCEEEECTTTEEETTC
T ss_pred             CcEEEECccCCcCCcCCccCCCCCEEEEEE--ECCCCEEEEEECCCCCEEEechHHeEECCC
Confidence            467999999999999999999999999964  467899999984  8999999999999874

>2yup_A Vinexin; sorbin and SH3 domain-containing protein 3, SH3-containing adapter molecule 1, SCAM-1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.40  E-value=5.9e-13  Score=102.15  Aligned_cols=60  Identities=35%  Similarity=0.622  Sum_probs=53.6

Q ss_pred             cceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEee--CceeeecccceeecCCC
Q psy7077         168 EYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR--GQTGWFPESYVEPCDET  229 (336)
Q Consensus       168 ~~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~--g~~G~fP~~yve~~~~~  229 (336)
                      ....++|+|+|.++..+||+|++||+|.|+  ...+++||.|++.  |+.||||++||+.+...
T Consensus        16 ~~~~~~alydy~~~~~~eLsf~~Gd~i~v~--~~~~~~Ww~g~~~~~g~~G~fP~~yv~~~~~~   77 (90)
T 2yup_A           16 EYGEAVAQYTFKGDLEVELSFRKGEHICLI--RKVNENWYEGRITGTGRQGIFPASYVQVSREP   77 (90)
T ss_dssp             GSEEEEECSCCCCCSSSBCCCCTTCEEEES--SCCCSSEEEEECTTTCCEEEEEGGGEEEEECC
T ss_pred             cceEEEEeecCCcCCcCcCCCCCCCEEEEE--EEcCCCeEEEEECCCCCEEEEehHHeEEcCCC
Confidence            456899999999999999999999999996  3467899999986  99999999999998753

>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein 10, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.40  E-value=5.8e-13  Score=97.24  Aligned_cols=59  Identities=22%  Similarity=0.424  Sum_probs=51.5

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEee-CceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR-GQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~-g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|+|.++.++||+|++||+|.|+.. ..++|||.++.. |+.||||++||+.+..
T Consensus         7 ~~~~~alydy~~~~~~eLs~~~Gd~i~vl~~-~~~~gW~~~~~~~g~~G~~P~~yv~~~~~   66 (70)
T 2ct4_A            7 GGHCVAIYHFEGSSEGTISMAEGEDLSLMEE-DKGDGWTRVRRKEGGEGYVPTSYLRVTSG   66 (70)
T ss_dssp             SCEEEESSCBCCCSTTCCCBCTTCEEEEEEC-CSSSCEEEEECSSSCEEEEEGGGEEECCC
T ss_pred             CCEEEEcccCCCCCCCcCCCCCCCEEEEEec-cCCCCeEEEEeCCCCEEEEEhHHeEEcCC
Confidence            4679999999999999999999999999642 235679999986 9999999999998764

>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A

Probab=99.39  E-value=5.8e-13  Score=94.90  Aligned_cols=42  Identities=31%  Similarity=0.741  Sum_probs=37.7

Q ss_pred             CCCCCCCEEEEEee-cCCCeEEEEeCCceeEeeCCCeeecCCC
Q psy7077         278 PIMGLGTVVPVKQN-AEPGWLAGELRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~-~~~~W~~g~~~G~~G~fPsnyV~~i~~~  319 (336)
                      |+|++||+|.|+++ .+++||.|+.+|+.||||+|||+.+.+.
T Consensus        18 Ls~~~Gd~i~v~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~   60 (62)
T 2j6f_A           18 LTIRVGEIIRNVKKLQEEGWLEGELNGRRGMFPDNFVKEIKRE   60 (62)
T ss_dssp             CCBCTTCEEEEEEECSSTTEEEEEETTEEEEEEGGGEEECC--
T ss_pred             cCCcCCCEEEEEEecCCCCEEEEEECCcEEEechHHEEECCCC
Confidence            55999999999999 8899999999999999999999998754

>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens}

Probab=99.39  E-value=5.7e-13  Score=93.59  Aligned_cols=54  Identities=20%  Similarity=0.547  Sum_probs=45.8

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD  317 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~  317 (336)
                      +++.+++.+...++                 |+|++||+|.|+++.+++||.|+.+|++|+||+|||+.++
T Consensus         4 ~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~   57 (58)
T 2bz8_A            4 AIVEFDYQAQHDDE-----------------LTISVGEIITNIRKEDGGWWEGQINGRRGLFPDNFVREIK   57 (58)
T ss_dssp             EEESSCBCCCSTTB-----------------CCBCTTCEEEEEECCTTTEEEEEETTEEEEEEGGGEEECC
T ss_pred             EEECcccCCCCcCE-----------------eeECCCCEEEEEEeCCCCEEEEEECCeEEEEehHHeEEcC
Confidence            45566666655554                 5599999999999999999999999999999999999875

>2csq_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=6.1e-13  Score=103.58  Aligned_cols=60  Identities=25%  Similarity=0.435  Sum_probs=52.8

Q ss_pred             ceeeeeeeecccC--------CCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCCC
Q psy7077         169 YRRYRAIYEFVSR--------NGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  229 (336)
Q Consensus       169 ~~~~~al~df~a~--------~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~~  229 (336)
                      ...++|+|+|.++        ..+||+|++||+|.|+. ...++|||+|+++|+.||||++||+.+...
T Consensus        17 ~~~~~Alydy~~~~~~~~~~~~~~eLsf~~Gd~i~vl~-~~~~~gWw~g~~~g~~G~~P~~yv~~~~~~   84 (97)
T 2csq_A           17 ARIFVALFDYDPLTMSPNPDAAEEELPFKEGQIIKVYG-DKDADGFYRGETCARLGLIPCNMVSEIQAD   84 (97)
T ss_dssp             CEEEECSSCBCTTTTSSCHHHHTTBCCBCTTCEEEEEE-EECTTCEEEEEETTEEEEEETTTSEECCCC
T ss_pred             ceEEEEccccCCCcccccCCCCCCccCCCCCCEEEEEE-ecCCCCeEEEEECCcEEEEehHHeEECCCC
Confidence            4578999999999        79999999999999973 335678999999999999999999998743

>1i07_A Epidermal growth factor receptor kinase substrate EPS8; hormone/growth factor; 1.80A {Mus musculus} SCOP: b.34.2.1 PDB: 1aoj_A 1i0c_A

Probab=99.39  E-value=3.9e-13  Score=95.12  Aligned_cols=56  Identities=23%  Similarity=0.506  Sum_probs=50.1

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEE-eeCceeeecccceeecCC
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE-LRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~-~~g~~G~fP~~yve~~~~  228 (336)
                      ..++|+|+|.++.++||+|++||+|.|+.  . +++||.|+ .+|+.||||++||+.+.+
T Consensus         2 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~--~-~~~Ww~~~~~~g~~G~~P~~yv~~~~~   58 (60)
T 1i07_A            2 KYAKSKYDFVARNSSELSVMKDDVLEILD--D-RRQWWKVRNASGDSGFVPNNILDIMRT   58 (60)
T ss_dssp             CEEEESSCBCCSSTTBCCBCTTCEEEECG--G-GCCEEEEECTTSCEEEEEGGGEEEECC
T ss_pred             eEEEECccCCCCCCCcccCCCCCEEEEEE--c-CCCeEEEEECCCCEEEEEHHHeEEccC
Confidence            36899999999999999999999999963  3 78999998 489999999999998864

>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane, nuclear protein, phosphorylation, polymorphism, transport, structural genomics; NMR {Homo sapiens}

Probab=99.39  E-value=3.2e-13  Score=98.56  Aligned_cols=58  Identities=26%  Similarity=0.497  Sum_probs=51.7

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeC--ceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRG--QTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g--~~G~fP~~yve~~~~  228 (336)
                      ...++|+|+|.++.++||+|++||+|.|+.  ..+++||.|+..+  +.||||++||+.+..
T Consensus         7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~--~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~~   66 (70)
T 2ecz_A            7 GGEAIAKFNFNGDTQVEMSFRKGERITLLR--QVDENWYEGRIPGTSRQGIFPITYVDVISG   66 (70)
T ss_dssp             CBCEEESSCCCCCSTTBCCCCTTCBCEEEE--EEETTEEEEEETTTTEEEEECTTTEEESSS
T ss_pred             CCEEEECccCCCCCcCCcCCCCCCEEEEEE--ecCCCeEEEEECCCCCEEEEchHHEEECCC
Confidence            467999999999999999999999999964  3567999999865  999999999999874

>2o2o_A SH3-domain kinase-binding protein 1; CIN85, protein binding; NMR {Homo sapiens}

Probab=99.38  E-value=2.1e-13  Score=105.20  Aligned_cols=59  Identities=36%  Similarity=0.735  Sum_probs=53.4

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  229 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~~  229 (336)
                      ...++|+|+|.++.++||+|++||+|.|+  ...++|||.|+++|+.||||++||+.+...
T Consensus        18 ~~~~~Alydy~a~~~~eLsf~~Gd~i~V~--~~~~~gWw~g~~~g~~G~fPsnyV~~~~~~   76 (92)
T 2o2o_A           18 RRRCQVAFSYLPQNDDELELKVGDIIEVV--GEVEEGWWEGVLNGKTGMFPSNFIKELSGE   76 (92)
T ss_dssp             SCEEEECSCBCCCSSSCCCBCSSCEEECC--CGGGSSCBCCEETTEECCBCSSSEECCSSC
T ss_pred             CeEEEEccccCCCCCccccccCCCEEEEe--EecCCCEEEEEECCeEEEeehHHEEECCCC
Confidence            46799999999999999999999999996  446789999999999999999999998754

>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.38  E-value=1.3e-12  Score=94.78  Aligned_cols=56  Identities=16%  Similarity=0.412  Sum_probs=47.4

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~  319 (336)
                      ..+.+++.+...++                 |+|++||+|.|+++.+++||.|+.+|++||||+|||+.+...
T Consensus        10 ~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~   65 (68)
T 2dl4_A           10 YVALYKFVPQENED-----------------LEMRPGDIITLLEDSNEDWWKGKIQDRIGFFPANFVQRLSGP   65 (68)
T ss_dssp             EEESSCCCCSSTTB-----------------CCCCTTCEEEEEECCCSSEEEEECSSCEEEEETTTEEECCCC
T ss_pred             EEEeeeECCCCcCC-----------------cCCCCCCEEEEEEeCCCCEEEEEECCcEEEEehHHeEECCCC
Confidence            45666666655555                 559999999999999999999999999999999999999754

>1x6b_A RHO guanine exchange factor (GEF) 16; SH3 domain, neuroblastoma, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.38  E-value=3.6e-13  Score=100.81  Aligned_cols=58  Identities=33%  Similarity=0.723  Sum_probs=52.5

Q ss_pred             cceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe--eCceeeecccceeecCC
Q psy7077         168 EYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPCDE  228 (336)
Q Consensus       168 ~~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~--~g~~G~fP~~yve~~~~  228 (336)
                      ....++|+|+|.++.++||+|++||+|.|+.  . +++||+|++  +|+.||||++||+.+..
T Consensus        16 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~--~-~~gW~~g~~~~~g~~G~fP~~yv~~~~~   75 (79)
T 1x6b_A           16 DLPQVEITKAFFAKQADEVTLQQADVVLVLQ--Q-EDGWLYGERLRDGETGWFPEDFARFISG   75 (79)
T ss_dssp             SCCEEEESSCCCCCSSSBCCCCTTEEEEEEE--E-ETTEEEEEETTTCCEEEECGGGCEEEES
T ss_pred             CCCEEEECeeECCCCcCCcCCCCCCEEEEEE--e-CCCEEEEEECCCCCEEEEchHHEEECCC
Confidence            3578999999999999999999999999964  3 789999998  89999999999999864

>1wie_A RIM binding protein 2; beta barrel, KIAA0318 protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.38  E-value=6.1e-13  Score=103.38  Aligned_cols=60  Identities=27%  Similarity=0.451  Sum_probs=53.2

Q ss_pred             ceeeeeeeecccCC------CCCCCCCCCCEEEEeeeecCCCCeEEEEe-eCceeeecccceeecCCC
Q psy7077         169 YRRYRAIYEFVSRN------GDELSFQPGDIIMVPVKQNAEPGWLAGEL-RGQTGWFPESYVEPCDET  229 (336)
Q Consensus       169 ~~~~~al~df~a~~------~~eLs~~~Gdii~v~~~~~~~~gW~~g~~-~g~~G~fP~~yve~~~~~  229 (336)
                      ...++|+|+|.++.      .+||+|++||+|.|+. ...++|||.|++ +|+.||||++||+.+...
T Consensus        17 ~~~~~Alydy~~~~~~~~~~~~eLsf~~Gd~i~v~~-~~~~~gWw~g~~~~g~~G~~Psnyv~~~~~~   83 (96)
T 1wie_A           17 VHLCVARYSYNPFDGPNENPEAELPLTAGKYLYVYG-DMDEDGFYEGELLDGQRGLVPSNFVDFVQDN   83 (96)
T ss_dssp             EEEEEESSCCCGGGSSCSCTTTBCCCCTTCEEEEES-SCCSSSCCEEEETTCCBCBCCTTSEECCCSC
T ss_pred             CcEEEECCccCCCcccCCCCCCeeeECCCCEEEEeE-ecCCCCEEEEEECCCCEEEEchHHEEEcCCC
Confidence            46799999999988      9999999999999961 447789999998 899999999999998754

>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus}

Probab=99.38  E-value=3.5e-13  Score=98.33  Aligned_cols=58  Identities=34%  Similarity=0.593  Sum_probs=51.8

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEE--eeCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE--LRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~--~~g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|+|.++.++||+|++||+|.|+.  ..+++||.|+  .+|+.||||++||+.+..
T Consensus         7 ~~~~~al~~y~~~~~~eLs~~~Gd~i~v~~--~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~~   66 (70)
T 2cuc_A            7 GNMFVALHTYSAHRPEELDLQKGEGIRVLG--KYQDGWLKGLSLLTGRTGIFPSDYVIPVSG   66 (70)
T ss_dssp             SCCEECCSCBCCCSTTBCCBCTTCEEEEEE--EEETTEEEEEETTTCCEEEEEGGGCEECCC
T ss_pred             CcEEEECeeECcCCCCcCCCCCCCEEEEEE--ecCCCeEEEEECCCCCEEEEchHHeEECcC
Confidence            467999999999999999999999999964  3468999999  689999999999999864

>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate repeat-containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2kea_A

Probab=99.38  E-value=1.3e-12  Score=96.35  Aligned_cols=42  Identities=19%  Similarity=0.259  Sum_probs=39.1

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~  319 (336)
                      |+|++||+|.|+++.+++||.|+++|++||||+|||+.+++.
T Consensus        28 Ls~~~Gd~i~v~~~~~~gWw~g~~~g~~G~fP~~yv~~~~~~   69 (73)
T 2ebp_A           28 LKLKKGDIIDIISKPPMGTWMGLLNNKVGTFKFIYVDVLSSG   69 (73)
T ss_dssp             CCBCSSCEEEEEECCSSSCEEEECSSCEEEECSTTEEECCCC
T ss_pred             cCCCCCCEEEEEEeCCCCeEEEEECCCEEEEeHHHEEECCCC
Confidence            559999999999999999999999999999999999999754

>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked agammaglobulinemia, XLA, BTK, SH3 domain, transferase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A

Probab=99.38  E-value=1.6e-13  Score=99.35  Aligned_cols=58  Identities=22%  Similarity=0.626  Sum_probs=51.6

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEE-eeCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE-LRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~-~~g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|+|.++.++||+|++||+|.|+  ...+++||.|+ .+|+.||||++||+.++.
T Consensus         8 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~--~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~~   66 (67)
T 1aww_A            8 LKKVVALYDYMPMNANDLQLRKGDEYFIL--EESNLPWWRARDKNGQEGYIPSNYVTEAED   66 (67)
T ss_dssp             CCEEEBSSCCCCSSSSSCCCCSSCEEECC--CCCSSSEECCBCTTSCBCCEETTTBCCSCC
T ss_pred             CeEEEECccCCCCCCCCccCCCCCEEEEE--EccCCCcEEEEECCCCEEEEchHhEEEcCC
Confidence            46799999999999999999999999996  34678999998 689999999999997653

>2ke9_A Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosphoprotein, protein binding; NMR {Homo sapiens}

Probab=99.38  E-value=5.2e-13  Score=100.97  Aligned_cols=58  Identities=26%  Similarity=0.476  Sum_probs=51.1

Q ss_pred             cceeeeeeeec-ccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEee------CceeeecccceeecC
Q psy7077         168 EYRRYRAIYEF-VSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR------GQTGWFPESYVEPCD  227 (336)
Q Consensus       168 ~~~~~~al~df-~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~------g~~G~fP~~yve~~~  227 (336)
                      ....++|+|+| .++..+||+|++||+|.|+  ...++|||.|++.      |+.||||++||+.+.
T Consensus        17 ~~~~~~Alydy~~a~~~~eLsf~~GDiI~V~--~~~~~gWw~G~~~~~~~~tg~~G~fPsnyV~~~~   81 (83)
T 2ke9_A           17 GSLKVRALKDFWNLHDPTALNVRAGDVITVL--EQHPDGRWKGHIHESQRGTDRIGYFPPGIVEVVS   81 (83)
T ss_dssp             CCEEEEESSCBCCCSCTTBCCBCTTCEEEES--CSSCSSCEEEEECCSSTTSCCCEEECGGGEESSC
T ss_pred             CCeEEEEccccCCCCCCCcccccCCCEEEEE--EecCCCeEEEEECCCCCCCCCEEEechHHEEECC
Confidence            35679999999 8999999999999999996  4567889999975      699999999999875

>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR {Homo sapiens}

Probab=99.38  E-value=4.6e-13  Score=96.47  Aligned_cols=44  Identities=23%  Similarity=0.614  Sum_probs=39.7

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCCCC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGE  321 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~~~  321 (336)
                      |+|++||+|.|+++.+++||.|+.+|++|+||+|||+.+...++
T Consensus        18 Ls~~~Gd~i~v~~~~~~gWw~g~~~g~~G~fP~~yv~~~~~~~~   61 (65)
T 2fei_A           18 LELKVGDIIDINEEVEEGWWSGTLNNKLGLFPSNFVKELELEHH   61 (65)
T ss_dssp             CCCCTTCEEECCCCSSSSEEEEESSSCEEEEETTTSCBCCCCC-
T ss_pred             cCCCCCCEEEEEEecCCCEEEEEECCcEEEecHHHEEEcCCCCC
Confidence            55999999999999999999999999999999999999876543

>2e5k_A Suppressor of T-cell receptor signaling 1; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.38  E-value=1e-12  Score=101.67  Aligned_cols=62  Identities=32%  Similarity=0.717  Sum_probs=53.2

Q ss_pred             cceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCC--CCeEEEE--eeCceeeecccceeecCCC
Q psy7077         168 EYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAE--PGWLAGE--LRGQTGWFPESYVEPCDET  229 (336)
Q Consensus       168 ~~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~--~gW~~g~--~~g~~G~fP~~yve~~~~~  229 (336)
                      ....++|+|+|.++.++||+|++||+|.|+.....+  +|||.|+  .+|+.|+||++||+.+.+.
T Consensus        15 ~~~~~~Alydy~~~~~~eLs~~~Gd~i~v~~~~~~~~~~gWw~g~~~~~g~~G~fP~~yv~~~~~~   80 (94)
T 2e5k_A           15 NHETLQVIYPYTPQNDDELELVPGDFIFMSPMEQTSTSEGWIYGTSLTTGCSGLLPENYITKADEC   80 (94)
T ss_dssp             CCEEEEECSCBCCSSSSBCCBCTTCEEEECGGGCCSTTTTEEEEEESSSCCEEEEEGGGEEECCSC
T ss_pred             CCeEEEECCcCCCCCCCCcCCCCCCEEEEEECcCCCCCCCcEEEEECCCCCEEEechHHeEEcccC
Confidence            356899999999999999999999999997432134  8999999  6899999999999998743

>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C* 4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 3ua7_A 3ua6_A 1fyn_A 1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C* 1qwe_A ...

Probab=99.38  E-value=7.5e-13  Score=100.32  Aligned_cols=59  Identities=25%  Similarity=0.585  Sum_probs=52.9

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe--eCceeeecccceeecCCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPCDET  229 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~--~g~~G~fP~~yve~~~~~  229 (336)
                      ...++|+|+|.++.+++|+|++||+|.|+  ...+++||.|+.  +|+.||||++||+.++..
T Consensus         6 ~~~~~Alydy~a~~~~eLsf~~Gd~i~vl--~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~~~   66 (84)
T 4ag1_C            6 VTLFVALYDYNATRWTDLSFHKGEKFQIL--EFGPGDWWEARSLTTGETGYIPSNYVAPVDSI   66 (84)
T ss_dssp             CCEEEESSCBCCSBTTBCCBCTTCEEEEE--ECCSSSEEEEEETTTCCEEEEEGGGEEETTTC
T ss_pred             CEEEEEcccCCCCCCCcccccCCCEEEEE--EecCCCeEEEEECCCCCEEEEehHHeEECCCc
Confidence            46799999999999999999999999995  446789999998  899999999999998753

>2enm_A Sorting nexin-9; SH3-like barrel, protein transport, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.37  E-value=8.1e-13  Score=98.30  Aligned_cols=59  Identities=34%  Similarity=0.694  Sum_probs=52.1

Q ss_pred             eeeeeeeecccC-CCCCCCCCCCCEEEEeeeecCCCCeEEEE-eeCceeeecccceeecCCC
Q psy7077         170 RRYRAIYEFVSR-NGDELSFQPGDIIMVPVKQNAEPGWLAGE-LRGQTGWFPESYVEPCDET  229 (336)
Q Consensus       170 ~~~~al~df~a~-~~~eLs~~~Gdii~v~~~~~~~~gW~~g~-~~g~~G~fP~~yve~~~~~  229 (336)
                      ..++|+|+|.++ .++||+|++||+|.|+.. ..++|||.|+ .+|+.||||++||+.+...
T Consensus        10 ~~~~al~dy~~~~~~~eLs~~~Gd~i~v~~~-~~~~gW~~g~~~~g~~G~~P~~yv~~~~~~   70 (77)
T 2enm_A           10 TKARVMYDFAAEPGNNELTVTEGEIITVTNP-NVGGGWLEGKNNKGEQGLVPTDYVEILPND   70 (77)
T ss_dssp             EEEEESSCCCCCTTSSBCCCCTTCEEEEEES-CCSSSEEEEECTTCCEEEEETTTEEEECCC
T ss_pred             cEEEECccCCCCCCCCeecCCCCCEEEEeEc-cCCCCeEEEEECCCCEEEeehHHeEECCCC
Confidence            679999999999 999999999999999632 2368999999 7899999999999998743

>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens}

Probab=99.37  E-value=9.1e-13  Score=95.43  Aligned_cols=41  Identities=29%  Similarity=0.444  Sum_probs=38.4

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  318 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~  318 (336)
                      |+|++||+|.|+++.+++||.|+++|++||||+|||+.+++
T Consensus        25 Ls~~~Gd~i~v~~~~~~gWw~g~~~g~~G~fP~~yv~~~~~   65 (67)
T 2eyx_A           25 LALEVGELVKVTKINVSGQWEGECNGKRGHFPFTHVRLLDQ   65 (67)
T ss_dssp             CCBCSSEEEEEEEECTTSEEEEEETTEEEEEEGGGBCCBCS
T ss_pred             cccCCCCEEEEEEecCCCEEEEEECCCEEEEehHhEEEcCC
Confidence            56999999999999999999999999999999999998864

>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A

Probab=99.37  E-value=1e-12  Score=92.98  Aligned_cols=53  Identities=26%  Similarity=0.324  Sum_probs=45.2

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeec
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPC  316 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i  316 (336)
                      +.|.+++.+...++                 |+|++||+|.|+++.+++||.|+.+|++|+||+|||+.+
T Consensus         7 ~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~W~~g~~~g~~G~~P~~yv~~l   59 (60)
T 1w70_A            7 AEALFDFTGNSKLE-----------------LNFKAGDVIFLLSRINKDWLEGTVRGATGIFPLSFVKIL   59 (60)
T ss_dssp             EEESSCBCCSSTTB-----------------CCBCTTCEEEEEEECSSSEEEEEETTEEEEEEGGGEEEC
T ss_pred             EEECccCCcCCCCC-----------------ccCCCCCEEEEEEeCCCCeEEEEECCCEEEechHHEEEC
Confidence            45666666655544                 559999999999999999999999999999999999986

>2rf0_A Mitogen-activated protein kinase kinase kinase 10; MAP3K10, MLK2, SH3 domain, TKL kinase, MKN28, structural GEN structural genomics consortium, SGC; 2.00A {Homo sapiens}

Probab=99.37  E-value=6.2e-13  Score=101.87  Aligned_cols=57  Identities=30%  Similarity=0.718  Sum_probs=50.0

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeec---CCCCeEEEEe-eCceeeecccceee
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQN---AEPGWLAGEL-RGQTGWFPESYVEP  225 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~---~~~gW~~g~~-~g~~G~fP~~yve~  225 (336)
                      ...++|+|||.++.++||+|++||+|.|+....   .++|||.|+. +|+.||||++||++
T Consensus        29 ~~~~~Alydy~a~~~~ELsf~~GD~I~Vl~~~~~~~~~~gWw~g~~~~g~~G~fP~nyV~p   89 (89)
T 2rf0_A           29 GPVWTAVFDYEAAGDEELTLRRGDRVQVLSQDCAVSGDEGWWTGQLPSGRVGVFPSNYVAP   89 (89)
T ss_dssp             CCEEEECSCBCCSSTTBCCBCTTCEEEEEECCHHHHSSTTEEEEECTTCCEEEEEGGGEEC
T ss_pred             CcEEEECCccCCCCCCccccCCCCEEEEEeccCCcccCCCEEEEEECCCCEEEEcHHHCcC
Confidence            468999999999999999999999999964211   3789999998 99999999999974

>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A

Probab=99.37  E-value=9.8e-13  Score=95.53  Aligned_cols=57  Identities=26%  Similarity=0.458  Sum_probs=50.5

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe-eCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL-RGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~-~g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|+|.++.++||+|++||+|.|+.  . +++||.++. +|+.||||++||+.+..
T Consensus         8 ~~~~~alydy~~~~~~eLs~~~Gd~i~v~~--~-~~~Ww~~~~~~g~~G~~P~~yv~~~~~   65 (68)
T 2k2m_A            8 LKWVLCNYDFQARNSSELSVKQRDVLEVLD--D-SRKWWKVRDPAGQEGYVPYNILTPYPA   65 (68)
T ss_dssp             CCEEEESSCBCCCSSSBCCBCTTCEEEEEE--C-SSSEEEEECTTSCCEEEEGGGEEECCS
T ss_pred             CEEEEECccCCCCCCCcccCCCCCEEEEEE--c-CCCeEEEEeCCCCEEEEEhhhEEEcCC
Confidence            467999999999999999999999999964  2 389999975 79999999999998763

>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens}

Probab=99.37  E-value=1e-12  Score=95.46  Aligned_cols=57  Identities=19%  Similarity=0.382  Sum_probs=46.5

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETG  320 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~~  320 (336)
                      ..+.+++.+...++                 |+|++||+|.|+++.+++||.|+.+|++||||+|||+.+...+
T Consensus         6 ~~Alydy~~~~~~e-----------------Lsf~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~~   62 (68)
T 2ew3_A            6 CRGLYDFEPENQGE-----------------LGFKEGDIITLTNQIDENWYEGMIHGESGFFPINYVEVIVPLE   62 (68)
T ss_dssp             EEESSCBCCCSTTB-----------------CCBCTTCEEEEEEESSSSEEEEEETTEEEEEEGGGEEESCC--
T ss_pred             EEEeeeECCCCCCc-----------------cCCCCCCEEEEEEecCCCEEEEEECCcEEEeeHHHEEEcCccC
Confidence            45566666655554                 5599999999999999999999999999999999999886543

>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=6.1e-13  Score=99.31  Aligned_cols=58  Identities=21%  Similarity=0.483  Sum_probs=51.5

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecC-CCCeEEEEee-CceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNA-EPGWLAGELR-GQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~-~~gW~~g~~~-g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|+|.++.++||+|++||+|.|+.  .. +++||.|+.. |+.||||++||+.+..
T Consensus        13 ~~~~~alydy~~~~~~eLs~~~Gd~i~v~~--~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~~   72 (78)
T 2dl5_A           13 PLTCKVVYSYKASQPDELTIEEHEVLEVIE--DGDMEDWVKARNKVGQVGYVPEKYLQFPTS   72 (78)
T ss_dssp             SEEEEECSCBCCCSTTBCCBCSSEEEEEEE--CCSSSSEEEEECTTCCEEEEETTTSCCSCC
T ss_pred             CcEEEEceeECCCCCCCCCCCCCCEEEEEe--ccCCCCcEEEEeCCCCEEEEEhHHEEECCC
Confidence            467999999999999999999999999964  34 4899999986 9999999999998764

>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=3.4e-12  Score=95.72  Aligned_cols=65  Identities=18%  Similarity=0.273  Sum_probs=51.6

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCCCCCCCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVPGT  326 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~~~~~~~~  326 (336)
                      .++.+++.+...++                 |+|++||+|.|+++.+++||.++.+|++||||+|||+.+........+.
T Consensus        11 ~~al~dy~~~~~~e-----------------Ls~~~Gd~i~vl~~~~~gWw~g~~~g~~G~~P~~yv~~~~~~~~~~~~~   73 (80)
T 2ekh_A           11 YMTCSAYQKVQDSE-----------------ISFPAGVEVQVLEKQESGWWYVRFGELEGWAPSHYLVLDENEQPDPSGK   73 (80)
T ss_dssp             EEECSCBCCSSTTS-----------------CCBCTTCEEEEEEECTTSEEEEEETTEEEEEETTTEECCCCCCCCCCCC
T ss_pred             EEECCCCCCCCCCc-----------------cCcCCCCEEEEEEeCCCCeEEEEECCCEEEEEhHHeEECCCCCCCcccc
Confidence            35566666665555                 4599999999999999999999999999999999999997665444444


Q ss_pred             CC
Q psy7077         327 EL  328 (336)
Q Consensus       327 ~~  328 (336)
                      +.
T Consensus        74 ~~   75 (80)
T 2ekh_A           74 ES   75 (80)
T ss_dssp             SS
T ss_pred             cc
Confidence            33

>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus}

Probab=99.36  E-value=2.1e-12  Score=93.67  Aligned_cols=56  Identities=25%  Similarity=0.417  Sum_probs=47.0

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~  319 (336)
                      ..+.+++.+...++                 |+|++||+|.|+++.+++||.|+.+|++||||+|||+++.+.
T Consensus        10 ~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~   65 (68)
T 2djq_A           10 AKALCNYRGKNPGD-----------------LKFNKGDVILLRRQLDENWYQGEINGVSGIFPASSVEVISGP   65 (68)
T ss_dssp             EEECSCCCSCCTTC-----------------CCCCTTCEEEEEECCCSSEEEEEETTEEEEEESSSEETTCSC
T ss_pred             EEECCCCCCCCcCC-----------------ccCCCCCEEEEEEecCCCEEEEEECCcEEEeehHHEEEcCCC
Confidence            45566666655555                 559999999999999999999999999999999999998754

>2m0y_A Dedicator of cytokinesis protein 1; apoptosis; NMR {Mus musculus}

Probab=99.36  E-value=6.9e-13  Score=97.83  Aligned_cols=64  Identities=30%  Similarity=0.494  Sum_probs=54.2

Q ss_pred             cccccccceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe---eCceeeecccceeecCC
Q psy7077         162 RFRGVSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL---RGQTGWFPESYVEPCDE  228 (336)
Q Consensus       162 ~~p~~~~~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~---~g~~G~fP~~yve~~~~  228 (336)
                      ++|.......++|+|+|.++.++||+|++||+|.|+.  . ++|||.|+.   +|+.|+||++||+....
T Consensus         4 ~~p~~~~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~--~-~~~W~~g~~~~~~g~~G~~P~~yv~~~~~   70 (74)
T 2m0y_A            4 WVPTKREEKYGVAFYNYDARGADELSLQIGDTVHILE--T-YEGWYRGYTLRKKSKKGIFPASYIHLKEA   70 (74)
T ss_dssp             CBCCCSCCSCEEECSEECCCSSSBCCEETTEEEEEEE--B-SSSCEEEEESSCSSCCEEECGGGEEECCC
T ss_pred             ccCCCCCCeEEEEceeeCCCCcCcccCCCCCEEEEEE--c-CCCeEEEEECCCCCCEEEEehHHEEEecc
Confidence            4555444578999999999999999999999999964  3 378999997   79999999999998753

>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.36  E-value=3.3e-12  Score=95.25  Aligned_cols=56  Identities=25%  Similarity=0.471  Sum_probs=47.5

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~  319 (336)
                      ..+.+++.+...++                 |+|++||+|.|+++.+++||.|+.+|++||||+|||+.+...
T Consensus        20 ~~al~dy~~~~~~e-----------------Lsf~~Gd~i~v~~~~~~gWw~g~~~g~~G~~P~~yv~~~~~~   75 (78)
T 2ed0_A           20 VVAIYDYTKDKEDE-----------------LSFQEGAIIYVIKKNDDGWYEGVMNGVTGLFPGNYVESISGP   75 (78)
T ss_dssp             EEECSCBCCSSTTB-----------------CCBCSSCEEEEEEECSSSEEEEEETTEEEEEETTSEEECSSS
T ss_pred             EEECccCCccCcCc-----------------ccccCCCEEEEEEeCCCCEEEEEECCcEEEeChHHEEEcCCC
Confidence            45666776665555                 459999999999999999999999999999999999999754

>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain protein 2A, endophilin 1, EEN-B1, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2knb_B 3iql_A

Probab=99.36  E-value=1.9e-12  Score=95.25  Aligned_cols=57  Identities=23%  Similarity=0.380  Sum_probs=47.9

Q ss_pred             cccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCC
Q psy7077         246 ELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       246 ~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~  319 (336)
                      ...+.+++.+...++                 |+|++||+|.|+++.+++||.|+.+|++||||+|||+.+.+.
T Consensus         9 ~~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~   65 (73)
T 2dbm_A            9 CCRALYDFEPENEGE-----------------LGFKEGDIITLTNQIDENWYEGMLHGHSGFFPINYVEILVAL   65 (73)
T ss_dssp             EEEESSCBCCCSTTC-----------------CCBCTTCEEECCBCSSSSEEEEEETTEEEEEESSSEEESSCC
T ss_pred             EEEEccccCCCCCCC-----------------ccCCCCCEEEEEEecCCCEEEEEECCCEEEechHHEEEccCC
Confidence            345666776665555                 559999999999999999999999999999999999999754

>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.36  E-value=1e-12  Score=97.62  Aligned_cols=58  Identities=26%  Similarity=0.609  Sum_probs=52.1

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEee---Cce------eeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR---GQT------GWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~---g~~------G~fP~~yve~~~~  228 (336)
                      ...++|+|+|.++.++||+|++||+|.|+  ...+++||.|+..   |+.      ||||++||+.+..
T Consensus         7 ~~~~~alydy~~~~~~eLs~~~Gd~i~v~--~~~~~~Ww~g~~~~~~g~~~~~~~~G~~P~~yv~~~~~   73 (77)
T 2d8j_A            7 GQYFVALFDYQARTAEDLSFRAGDKLQVL--DTSHEGWWLARHLEKKGTGLGQQLQGYIPSNYVAEDSG   73 (77)
T ss_dssp             CEEEEESSCBCCSSSSBCCBCTTCCEEEE--ECCSSSEEEEEECSSCCSSCCCCSEEEEETTTEEECCC
T ss_pred             CCEEEEccCCCCCCCCccCCCCCCEEEEE--ECCCCCeEEEEECCCCCcCcccCCceEECHHHeeEcCC
Confidence            46899999999999999999999999996  4468899999986   888      9999999998764

>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.36  E-value=2.2e-12  Score=96.19  Aligned_cols=64  Identities=22%  Similarity=0.327  Sum_probs=51.8

Q ss_pred             cccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCCCCCCCC
Q psy7077         246 ELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVPG  325 (336)
Q Consensus       246 ~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~~~~~~~  325 (336)
                      .+.+.+++.+...++                 |+|++||+|.|+++.+++||.|+.+|++||||+|||+.++...+....
T Consensus         9 ~~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~~~~~~~   71 (78)
T 2yuo_A            9 RAKALLDFERHDDDE-----------------LGFRKNDIITIISQKDEHCWVGELNGLRGWFPAKFVEVLDERSKEYSI   71 (78)
T ss_dssp             EEEESSCBCCSSTTB-----------------CCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEEECCCCSCCSS
T ss_pred             EEEECccCCCCCCCC-----------------ccCCCCCEEEEEEecCCCEEEEEECCCEEEEehHHEEECCCcCCCCCC
Confidence            345667776665555                 459999999999999999999999999999999999999876555444


Q ss_pred             C
Q psy7077         326 T  326 (336)
Q Consensus       326 ~  326 (336)
                      .
T Consensus        72 ~   72 (78)
T 2yuo_A           72 A   72 (78)
T ss_dssp             C
T ss_pred             C
Confidence            3

>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.36  E-value=3.4e-12  Score=95.89  Aligned_cols=62  Identities=21%  Similarity=0.374  Sum_probs=50.4

Q ss_pred             ccccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCCCCCC
Q psy7077         245 LELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVV  323 (336)
Q Consensus       245 ~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~~~~~  323 (336)
                      ..+.+.+++.+...++                 |+|++||+|.|+++.+++||.|+.+|++||||+|||+.+....+..
T Consensus        11 ~~~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~~~~~   72 (81)
T 2ysq_A           11 VSAEAVWDHVTMANRE-----------------LAFKAGDVIKVLDASNKDWWWGQIDDEEGWFPASFVRLWVNQEDEV   72 (81)
T ss_dssp             EEEEESSCCCCSSSSS-----------------CCCCTTCEEEEEECCSSSEEEEECSSCEEEEEGGGEEESSCCCCCC
T ss_pred             eEEEEeeeECCCCCCc-----------------CCCCCCCEEEEEEEcCcCEEEEEECCCEEEechHHEEEcCCccccc
Confidence            3456667776665555                 5599999999999999999999999999999999999997654443

>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus}

Probab=99.36  E-value=1.1e-12  Score=96.54  Aligned_cols=55  Identities=25%  Similarity=0.423  Sum_probs=47.0

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  318 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~  318 (336)
                      ..+.+++.+...++                 |+|++||+|.|+++.+++||.|+.+|++|+||+|||+.+.+
T Consensus        16 ~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~W~~g~~~g~~G~~P~~yv~~~~~   70 (73)
T 3c0c_A           16 CKALYDFEPENDGE-----------------LGFREGDLITLTNQIDENWYEGMLHGQSGFFPLSYVQVLVP   70 (73)
T ss_dssp             EEESSCBCCSSTTB-----------------CCBCTTCEEEEEEECSSSEEEEEETTEEEEEEGGGEEEEEC
T ss_pred             EEECccCCCCCCCC-----------------ccCcCCCEEEEEEecCCCEEEEEECCCEEEeChHHEEECCC
Confidence            45666776665555                 45999999999999999999999999999999999999864

>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=2.1e-12  Score=93.72  Aligned_cols=56  Identities=20%  Similarity=0.238  Sum_probs=46.9

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~  319 (336)
                      ..+.+++.+...++                 |+|++||+|.|+++.+++||.|+.+|++|+||+|||+++...
T Consensus        10 ~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~   65 (68)
T 2dmo_A           10 HRVLFGFVPETKEE-----------------LQVMPGNIVFVLKKGNDNWATVMFNGQKGLVPCNYLEPVSGP   65 (68)
T ss_dssp             EEECSSCCCCSSSS-----------------CCCCTTCEEEECEECSSSCEEEEETTEEEEECSTTEEECCCS
T ss_pred             EEECcCCCcCCcCC-----------------CCCCCCCEEEEEEeCCCCEEEEEeCCCEEEeehHHeEECCCC
Confidence            45566666655555                 559999999999999999999999999999999999998653

>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=2.1e-12  Score=93.66  Aligned_cols=56  Identities=18%  Similarity=0.268  Sum_probs=47.1

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~  319 (336)
                      ..+.+++.+...++                 |+|++||+|.|+++.+++||.|+.+|++||||+|||+.+...
T Consensus        10 ~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~   65 (68)
T 1x2p_A           10 FVAIADYAATDETQ-----------------LSFLRGEKILILRQTTADWWWGERAGCCGYIPANHVGKHSGP   65 (68)
T ss_dssp             EEESSCCCCSSTTB-----------------CCCCTTCEEEEEECCSSSEEEEECTTCCEEEESSSEECCCCS
T ss_pred             EEECceECCCCcCC-----------------cCCCCCCEEEEEEcCCCCEEEEEECCeEEEEehHHeEECCCC
Confidence            45666676665555                 459999999999999999999999999999999999988654

>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.35  E-value=2.5e-12  Score=94.45  Aligned_cols=59  Identities=24%  Similarity=0.356  Sum_probs=49.1

Q ss_pred             ccccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCCC
Q psy7077         245 LELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETG  320 (336)
Q Consensus       245 ~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~~  320 (336)
                      ..+++.+++.+...++                 |+|++||+|.|+++.+++||.|+.+|++||||+|||++++...
T Consensus        10 ~~~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~~   68 (72)
T 2dl8_A           10 IEAIAKFDYVGRTARE-----------------LSFKKGASLLLYQRASDDWWEGRHNGIDGLIPHQYIVVQDTSG   68 (72)
T ss_dssp             EEEEESSCBCCSSSSB-----------------CCBCTTCEEEEEEEEETTEEEEEETTEEEEECSSSEEECCSSS
T ss_pred             EEEEECccCCcCCCCE-----------------eccCCCCEEEEEeecCCCEEEEEECCEEEEEchHHeEEcCCCC
Confidence            3456667777665555                 4599999999999999999999999999999999999987653

>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens}

Probab=99.35  E-value=1.1e-12  Score=94.42  Aligned_cols=42  Identities=31%  Similarity=0.616  Sum_probs=38.8

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~  319 (336)
                      |+|++||+|.|+++.+++||.|+.+|++||||+|||+.+...
T Consensus        18 Ls~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~fP~~yv~~~~~~   59 (65)
T 2nwm_A           18 LTLQKGDIVYIHKEVDKNWLEGEHHGRLGIFPANYVEVLPLE   59 (65)
T ss_dssp             CCBCTTCEEEEEECCTTTCEEEEETTEEEEECGGGEEECCCC
T ss_pred             cCCcCCCEEEEEEecCCCEEEEEECCcEEEEehhhEEEcCCC
Confidence            559999999999999999999999999999999999988744

>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus}

Probab=99.35  E-value=1.7e-12  Score=91.81  Aligned_cols=53  Identities=25%  Similarity=0.513  Sum_probs=44.7

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeec
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPC  316 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i  316 (336)
                      ..+.+++.+...++                 |+|++||+|.|+++.+++||.|+.+|++|+||+|||+++
T Consensus         8 ~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~l   60 (60)
T 2xmf_A            8 CKALYAYDAQDTDE-----------------LSFNANDIIDIIKEDPSGWWTGRLRGKQGLFPNNYVTKI   60 (60)
T ss_dssp             EEESSCBCCSSTTB-----------------CCBCTTCEEEEEEECTTSEEEEEETTEEEEEEGGGEEEC
T ss_pred             EEECccCCcCCcCC-----------------cCCCCCCEEEEEEecCCCEEEEEECCEEEEEcHHHEEEC
Confidence            45566666655554                 559999999999999999999999999999999999875

>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.35  E-value=1.1e-12  Score=93.46  Aligned_cols=54  Identities=24%  Similarity=0.445  Sum_probs=45.6

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD  317 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~  317 (336)
                      ..|.+++.+...++                 |+|++||+|.|+++.+++||.|+.+|++||||+|||+.+.
T Consensus         8 ~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~   61 (62)
T 1k4u_S            8 VEALFSYEATQPED-----------------LEFQEGDIILVLSKVNEEWLEGESKGKVGIFPKVFVEDSA   61 (62)
T ss_dssp             EECCSCBCCCSSSB-----------------CCBCSSCEEEEEEESSSSCEEEECSSCEEEECGGGCCCSC
T ss_pred             EEECCCCCcCCCCC-----------------ccCCCCCEEEEEEeCCCCEEEEEECCcEEEEeHHHEEECC
Confidence            45666666655554                 5599999999999999999999999999999999999874

>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A

Probab=99.35  E-value=1.3e-12  Score=94.51  Aligned_cols=42  Identities=29%  Similarity=0.454  Sum_probs=39.2

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~  319 (336)
                      |+|++||+|.|+++.+++||.|+.+|++|+||+|||+.+...
T Consensus        20 Lsf~~Gd~i~v~~~~~~~Ww~g~~~g~~G~fP~~yv~~~~~~   61 (67)
T 2bzy_A           20 LALEVGDIVKVTRMNINGQWEGEVNGRKGLFPFTHVKIFDPQ   61 (67)
T ss_dssp             CCBCTTCEEEEEEECSSSEEEEEETTEEEEEEGGGEEECCSC
T ss_pred             cccCCCCEEEEEEecCCCeEEEEeCCcEEEEehHHeEECCCc
Confidence            559999999999999999999999999999999999999754

>2epd_A RHO GTPase-activating protein 4; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=2.2e-12  Score=95.77  Aligned_cols=60  Identities=22%  Similarity=0.342  Sum_probs=49.5

Q ss_pred             ccccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCCCC
Q psy7077         245 LELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGE  321 (336)
Q Consensus       245 ~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~~~  321 (336)
                      ..+.+.+++.+...++                 |+|++||+|.|+++.+++||.|+.+|++||||+|||+.++...+
T Consensus        11 ~~~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~~~   70 (76)
T 2epd_A           11 VEAVACFAYTGRTAQE-----------------LSFRRGDVLRLHERASSDWWRGEHNGMRGLIPHKYITLPAGTEK   70 (76)
T ss_dssp             EEEEESSCEECSSTTB-----------------CEECTTCEEEEEEEEETTEEEEEETTEEEEEESSSEECCSSCSC
T ss_pred             EEEEECcCCCCCCCCc-----------------cCCCCCCEEEEEEeCCCCEEEEEECCcEEEEehHHEEEcCCCCC
Confidence            3456667777665555                 45999999999999889999999999999999999999976544

>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A

Probab=99.35  E-value=1.5e-12  Score=91.44  Aligned_cols=40  Identities=25%  Similarity=0.443  Sum_probs=37.1

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEeC--CceeEeeCCCeeecC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGELR--GQTGWFPESYVEPCD  317 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~~--G~~G~fPsnyV~~i~  317 (336)
                      |+|++||+|.|+++.+++||.|+.+  |+.|+||+|||++++
T Consensus        17 Ls~~~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~   58 (58)
T 1jo8_A           17 LTFVENDKIINIEFVDDDWWLGELEKDGSKGLFPSNYVSLGN   58 (58)
T ss_dssp             CCBCTTCEEEEEECCSSSEEEEEETTTCCEEEEEGGGEEECC
T ss_pred             cccCCCCEEEEEEecCCCcEEEEECCCCCEEEechHHeEECC
Confidence            5599999999999999999999988  999999999999874

>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A

Probab=99.35  E-value=2.9e-12  Score=92.91  Aligned_cols=57  Identities=21%  Similarity=0.377  Sum_probs=47.6

Q ss_pred             cccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCC
Q psy7077         246 ELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       246 ~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~  319 (336)
                      ...+.+++.+...++                 |+|++||+|.|+++.+++||.|+.+|++||||+|||+.+...
T Consensus         9 ~~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~W~~g~~~g~~G~~P~~yv~~~~~~   65 (68)
T 2dl3_A            9 PARAKFDFKAQTLKE-----------------LPLQKGDIVYIYKQIDQNWYEGEHHGRVGIFPRTYIELLSGP   65 (68)
T ss_dssp             EEEESSCBCCSSTTB-----------------CCBCTTCEEEEEECCSTTEEEEECSSCEEEEETTTEEECCSC
T ss_pred             EEEECccCCCCCcCC-----------------ccCCCCCEEEEeEecCCCEEEEEECCCEEEEchHHEEECCCC
Confidence            345666666655554                 559999999999999999999999999999999999998654

>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} SCOP: b.34.2.0 PDB: 2d1x_A

Probab=99.35  E-value=2e-12  Score=92.75  Aligned_cols=55  Identities=22%  Similarity=0.369  Sum_probs=46.2

Q ss_pred             cccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecC
Q psy7077         246 ELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD  317 (336)
Q Consensus       246 ~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~  317 (336)
                      .+.+.+++.+...++                 |+|++||+|.|+++.+++||.|+.+|+.|+||+|||+.++
T Consensus        11 ~~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~   65 (65)
T 3ulr_B           11 TAIALYDYQAAGDDE-----------------ISFDPDDIITNIEMIDDGWWRGVCKGRYGLFPANYVELRQ   65 (65)
T ss_dssp             CEEECSCBCCCSTTB-----------------CCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEECC
T ss_pred             EEEEEeeECCCCcCE-----------------eeEecCCEEEEEEecCCCEEEEEECCcEEEEehHHeEECC
Confidence            355666776665554                 5599999999999999999999999999999999999874

>1i1j_A Melanoma derived growth regulatory protein; SH3 subdomain, hormone/growth factor complex; 1.39A {Homo sapiens} SCOP: b.34.2.1 PDB: 1k0x_A 1hjd_A

Probab=99.35  E-value=9e-13  Score=104.56  Aligned_cols=59  Identities=19%  Similarity=0.333  Sum_probs=50.2

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeee-cCCCCeEEEEee--------CceeeecccceeecC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQ-NAEPGWLAGELR--------GQTGWFPESYVEPCD  227 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~-~~~~gW~~g~~~--------g~~G~fP~~yve~~~  227 (336)
                      ...++|+|+|.++..+||+|++||+|.|+... ..+++||.|+++        |+.||||+|||+.+.
T Consensus        22 ~~~~~Alydy~a~~~~ELsf~~GDiI~Vl~k~~~~g~dWW~G~~~~~~~~~~~g~~G~fPsnYV~~~~   89 (108)
T 1i1j_A           22 ISMAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVREDQ   89 (108)
T ss_dssp             SEEEEESSCBCCSSTTBCCBCTTCEEEEEEEECGGGTTEEEEEEBCSSTTCBCSCCEEEEGGGEEEEE
T ss_pred             eeEEEECCccCCCCCCccccCCCCEEEEEEecCCCCCCEEEEEECCccccCCCCCEEEEchhHEEEcc
Confidence            46799999999999999999999999997431 122349999987        899999999999876

>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=5.4e-12  Score=96.37  Aligned_cols=42  Identities=29%  Similarity=0.454  Sum_probs=39.0

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~  319 (336)
                      |+|++||+|.|+++.+++||.|+++|++||||+|||+.+...
T Consensus        35 Lsf~~Gd~i~v~~~~~~~Ww~g~~~g~~G~fP~~yv~~~~~~   76 (88)
T 2dbk_A           35 LALEVGDIVKVTRMNINGQWEGEVNGRKGLFPFTHVKIFDPQ   76 (88)
T ss_dssp             CCBCTTCEEEEEEECTTSCEEEECSSCEEEECTTTEEECCSS
T ss_pred             ccCCCCCEEEEEEecCCCEEEEEeCCCEEEEehHHeEECCCC
Confidence            559999999999999999999999999999999999999754

>2dlp_A KIAA1783 protein; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=4.5e-12  Score=96.13  Aligned_cols=57  Identities=25%  Similarity=0.429  Sum_probs=47.8

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEee--cCCCeEEEEeCCceeEeeCCCeeecCCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQN--AEPGWLAGELRGQTGWFPESYVEPCDETG  320 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~--~~~~W~~g~~~G~~G~fPsnyV~~i~~~~  320 (336)
                      +.|.+++.+...++                 |+|++||+|.|+++  .+++||.|+++|++||||+|||+.+....
T Consensus        11 ~~al~dy~~~~~~e-----------------Lsf~~Gd~i~v~~~~~~~~~Ww~g~~~g~~G~fP~~yv~~~~~~~   69 (85)
T 2dlp_A           11 VIALRSYITDNCSL-----------------LSFHRGDLIKLLPVATLEPGWQFGSAGGRSGLFPADIVQPAAAPD   69 (85)
T ss_dssp             EEESSCBCCSSSSB-----------------CCBCTTCEEEECCCSCCCTTEEEEESSSCEEEEETTSEEECCCSC
T ss_pred             EEECCCCCccCcCC-----------------ccCcCCCEEEEEEccCCCCCeEEEEECCEEEEechHHeEECCCcC
Confidence            45666776665555                 55999999999998  88999999999999999999999997654

>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.34  E-value=3.3e-12  Score=92.63  Aligned_cols=42  Identities=21%  Similarity=0.520  Sum_probs=38.8

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~  319 (336)
                      |+|++||+|.|+++.+++||.|+.+|++||||+|||+.+...
T Consensus        24 Ls~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~   65 (68)
T 1x2k_A           24 LYFEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAEQSGP   65 (68)
T ss_dssp             CCCCSSCEEEEEECSCSSEEEEESSSCEEEEETTTEEECCCC
T ss_pred             ccCCCCCEEEEEEcCCCCEEEEEECCcEEEEehHHeEEcCCC
Confidence            559999999999999999999999999999999999998654

>2v1r_A Peroxisomal membrane protein PAS20; protein transport, translocation, transmembrane, peptide COM structural genomics, peroxisome; 2.1A {Saccharomyces cerevisiae} SCOP: b.34.2.1

Probab=99.34  E-value=9.8e-13  Score=98.53  Aligned_cols=61  Identities=26%  Similarity=0.620  Sum_probs=50.7

Q ss_pred             cceeeeeeeecccCCCC-CCCCCCCCEEEEeeeecC---CCCeEEEEe-eCceeeecccceeecCC
Q psy7077         168 EYRRYRAIYEFVSRNGD-ELSFQPGDIIMVPVKQNA---EPGWLAGEL-RGQTGWFPESYVEPCDE  228 (336)
Q Consensus       168 ~~~~~~al~df~a~~~~-eLs~~~Gdii~v~~~~~~---~~gW~~g~~-~g~~G~fP~~yve~~~~  228 (336)
                      ....++|+|+|.++..+ ||+|++||+|.|+.....   ++|||.|+. +|+.||||++||+.+..
T Consensus        13 ~~~~~~alydy~~~~~~~eLs~~~Gd~i~v~~~~~~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~~   78 (80)
T 2v1r_A           13 KLEFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEIIKR   78 (80)
T ss_dssp             GCEEEEESSCBCCSSTTTBCCBCTTCEEEEEEEECTTSCEEEEEEEECTTSCEEEEEGGGEEEC--
T ss_pred             cCEEEEECccCCCCCCCCEecCCCCCEEEEEECCCCCCCCCCcEEEEeCCCCeEEEEHHHeEEcCC
Confidence            35679999999999999 999999999999743211   138999998 89999999999998863

>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.34  E-value=1.1e-12  Score=95.15  Aligned_cols=56  Identities=23%  Similarity=0.460  Sum_probs=50.1

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe-eCceeeecccceeecC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL-RGQTGWFPESYVEPCD  227 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~-~g~~G~fP~~yve~~~  227 (336)
                      ...++|+|+|.++.++||+|++||+|.|+.  + +++||.++. +|+.||||++||+.+.
T Consensus         7 ~~~~~alydy~~~~~~eLs~~~Gd~i~v~~--~-~~~Ww~~~~~~g~~G~~P~~yv~~~~   63 (68)
T 1wxb_A            7 GKYVKILYDFTARNANELSVLKDEVLEVLE--D-GRQWWKLRSRSGQAGYVPCNILGEAS   63 (68)
T ss_dssp             CCCEECSSCBCCSSSSBCCBCTTCEEEEEE--C-SSSEEEEECTTSCEEEEETTTCCBCC
T ss_pred             CEEEEECccCCCCCCCccCCCCCCEEEEEE--c-CCCEEEEEECCCCEEEEEHHHeEECC
Confidence            357899999999999999999999999964  3 489999995 8999999999999876

>1wxu_A Peroxisomal biogenesis factor 13; SH3 domain, PEX13, protein-protein interaction, structural genomics; NMR {Mus musculus}

Probab=99.34  E-value=1.5e-12  Score=100.43  Aligned_cols=61  Identities=34%  Similarity=0.682  Sum_probs=52.8

Q ss_pred             ccceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCC----CCeEEEEeeCc-eeeecccceeecCCC
Q psy7077         167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAE----PGWLAGELRGQ-TGWFPESYVEPCDET  229 (336)
Q Consensus       167 ~~~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~----~gW~~g~~~g~-~G~fP~~yve~~~~~  229 (336)
                      .....++|+|+|.++.++||+|++||+|.|+.  ..+    ++||.|+++|+ .||||++||+.+...
T Consensus        15 ~~~~~~~alydy~a~~~~eLsf~~Gd~i~v~~--~~~~~~~~gWw~g~~~~~~~G~~P~~yv~~~~~~   80 (93)
T 1wxu_A           15 DDHVVARAEYDFVAVSDEEISFRAGDMLNLAL--KEQQPKVRGWLLASLDGQTTGLIPANYVKILGKR   80 (93)
T ss_dssp             SCBBCEEESSCBCCSSSSBCCBCSSCBCEECC--TTTSCSCSSCEEEESSSSSCEEECSTTEEECCCB
T ss_pred             CCCEEEEECccCCCCCCCccCcCCCCEEEEEE--CCCCCCCCCcEEEEeCCcCEEEEehHHEEEcCCc
Confidence            34568999999999999999999999999964  344    69999998877 999999999998753

>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase, tyrosine-protein kinase LYK, kinase EMT, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.34  E-value=2.2e-12  Score=97.91  Aligned_cols=57  Identities=19%  Similarity=0.405  Sum_probs=50.9

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEE-eeCceeeecccceeecC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE-LRGQTGWFPESYVEPCD  227 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~-~~g~~G~fP~~yve~~~  227 (336)
                      ...++|+|+|.++..+||+|++||+|.|+  ...+++||.|+ .+|+.||||++||+.+.
T Consensus        19 ~~~~~alydy~~~~~~eLs~~~Gd~i~v~--~~~~~~Ww~~~~~~g~~G~~P~~yv~~~~   76 (85)
T 2yuq_A           19 ETVVIALYDYQTNDPQELALRRNEEYCLL--DSSEIHWWRVQDRNGHEGYVPSSYLVEKS   76 (85)
T ss_dssp             SCEEEESSCCCCSCSSBCCCCBTEEEEEE--ECCSSSEEEEECSSSCEEEEETTTCEECC
T ss_pred             CeEEEECcCCCCCCCCcCCCCCCCEEEEE--EecCCCeEEEEECCCCEEEEehHHeEEcc
Confidence            45699999999999999999999999996  44678999997 58999999999999874

>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A

Probab=99.34  E-value=2.3e-12  Score=92.27  Aligned_cols=54  Identities=22%  Similarity=0.451  Sum_probs=44.8

Q ss_pred             cccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeec--CCCeEEEEeCCceeEeeCCCeeec
Q psy7077         246 ELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNA--EPGWLAGELRGQTGWFPESYVEPC  316 (336)
Q Consensus       246 ~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~--~~~W~~g~~~G~~G~fPsnyV~~i  316 (336)
                      ...+.+++.+...++                 |+|++||+|.|+++.  +++||.|+.+|++|+||+|||+++
T Consensus         8 ~~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~~~W~~g~~~g~~G~~P~~yv~~l   63 (64)
T 2jte_A            8 YCRTLFPYTGTNEDE-----------------LTFREGEIIHLISKETGEAGWWKGELNGKEGVFPDNFAVQI   63 (64)
T ss_dssp             EEEESSCBCCSSSSB-----------------CCBCTTCEEEEEESCSSSTTEEEEEETTEEEEEEGGGEEEC
T ss_pred             EEEECccCCccCCCc-----------------cCCCCCCEEEEEECCCCCCCEEEEEECCeEEEEeHHHEEEC
Confidence            345666776665555                 459999999999885  789999999999999999999986

>1jqq_A PEX13P, peroxisomal membrane protein PAS20, PAS20P, roxin-13; compact beta-barrel of five anti-parrallel beta-strands; 2.65A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1n5z_A

Probab=99.34  E-value=1.3e-12  Score=100.50  Aligned_cols=62  Identities=26%  Similarity=0.609  Sum_probs=52.5

Q ss_pred             cceeeeeeeecccCCCC-CCCCCCCCEEEEeeeecC---CCCeEEEEe-eCceeeecccceeecCCC
Q psy7077         168 EYRRYRAIYEFVSRNGD-ELSFQPGDIIMVPVKQNA---EPGWLAGEL-RGQTGWFPESYVEPCDET  229 (336)
Q Consensus       168 ~~~~~~al~df~a~~~~-eLs~~~Gdii~v~~~~~~---~~gW~~g~~-~g~~G~fP~~yve~~~~~  229 (336)
                      ....++|+|+|.++..+ ||+|++||+|.|+.....   ++|||.|++ +|+.||||++||+.+...
T Consensus        13 ~~~~~~alydy~~~~~~~eLsf~~Gd~i~v~~~~~~~~~~~gWw~g~~~~g~~G~~P~~yv~~~~~~   79 (92)
T 1jqq_A           13 KLEFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEIIKRR   79 (92)
T ss_dssp             TCEEEEESSBBCCSSTTTBCCBCTTCEEEEEEEECTTSCEEEEEEEEETTSCEEEEEGGGEEECCCC
T ss_pred             cCEEEEECccCCCCCCCCCcCCCCCCEEEEEECCCCCCCCCCCeEEEeCCCCEEEEehHHeEECCCC
Confidence            35679999999999999 999999999999743211   138999998 899999999999998753

>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A

Probab=99.33  E-value=1.8e-12  Score=90.93  Aligned_cols=40  Identities=35%  Similarity=0.669  Sum_probs=37.5

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD  317 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~  317 (336)
                      |+|++||+|.|+++.+++||.|+.+|++|+||+|||+.++
T Consensus        18 Ls~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~   57 (58)
T 1uti_A           18 LGFRSGEVVEVLDSSNPSWWTGRLHNKLGLFPANYVAPMM   57 (58)
T ss_dssp             CCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEECC
T ss_pred             CCCCCCCEEEEEEECCCCEEEEEECCeEEEeeHHHeEEcc
Confidence            5599999999999999999999999999999999999874

>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A

Probab=99.33  E-value=2.2e-12  Score=90.46  Aligned_cols=40  Identities=30%  Similarity=0.715  Sum_probs=37.4

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD  317 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~  317 (336)
                      |+|++||+|.|+++.+++||.|+.+|++|+||+|||+.++
T Consensus        19 Ls~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~   58 (58)
T 1sem_A           19 LAFKRGDVITLINKDDPNWWEGQLNNRRGIFPSNYVCPYN   58 (58)
T ss_dssp             CCBCTTCEEEEEECSSSSEEEEEETTEEEEEEGGGEEECC
T ss_pred             cCCCCCCEEEEEEecCCCEEEEEECCcEEEechHHeEECC
Confidence            5599999999999999999999999999999999999864

>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A

Probab=99.33  E-value=2.5e-12  Score=90.59  Aligned_cols=39  Identities=38%  Similarity=0.809  Sum_probs=36.6

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeec
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPC  316 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i  316 (336)
                      |+|++||+|.|+++.+++||.|+.+|++|+||+|||+.+
T Consensus        21 Ls~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~l   59 (59)
T 2g6f_X           21 LSFSKGDVIHVTRVEEGGWWEGTHNGRTGWFPSNYVREI   59 (59)
T ss_dssp             CCBCTTCEEEEEEECTTSEEEEEETTEEEEEEGGGEEEC
T ss_pred             cCCCCCCEEEEEEecCCCEEEEEECCcEEEEeHHHEEEC
Confidence            559999999999999999999999999999999999875

>2kgt_A Tyrosine-protein kinase 6; SH3 domain, SRC kinase, PTK6, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; NMR {Homo sapiens}

Probab=99.33  E-value=1e-12  Score=96.37  Aligned_cols=56  Identities=32%  Similarity=0.708  Sum_probs=50.5

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe---eCce---eeecccceeecC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL---RGQT---GWFPESYVEPCD  227 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~---~g~~---G~fP~~yve~~~  227 (336)
                      ...++|+|+|.++.++||+|++||+|.| ..  .++|||.|+.   +|+.   ||||++||+.++
T Consensus        10 ~~~~~alydy~~~~~~eLs~~~Gd~i~v-~~--~~~~Ww~g~~~~~~g~~~~~G~~P~~yv~~~~   71 (72)
T 2kgt_A           10 GPKYVGLWDFKSRTDEELSFRAGDVFHV-AR--KEEQWWWATLLDEAGGAVAQGYVPHNYLAERE   71 (72)
T ss_dssp             CCEEECCTTCBCSSTTSCBCCTTCCEEE-EE--ECSSCEEEEEECTTSCEEEEEEECTTTSEEEC
T ss_pred             CcEEEEcccCCCCCcCCcCCCCCCEEEE-ee--CCCCEEEEEEcCCCCCEeCCcEEcHhHEEEcc
Confidence            4679999999999999999999999999 54  4789999998   7999   999999999864

>2cub_A Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor, tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.33  E-value=6.6e-12  Score=95.88  Aligned_cols=67  Identities=22%  Similarity=0.317  Sum_probs=53.1

Q ss_pred             ccccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCCCCCCC
Q psy7077         245 LELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVP  324 (336)
Q Consensus       245 ~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~~~~~~  324 (336)
                      ..+++.++|.+...++                 |+|++||+|.|+++.+++||.++.+|++||||+|||+.+.+......
T Consensus        18 ~~~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~gWw~g~~~g~~G~~P~~yv~~~~~~~~~~~   80 (88)
T 2cub_A           18 MPAYVKFNYMAEREDE-----------------LSLIKGTKVIVMEKCSDGWWRGSYNGQVGWFPSNYVTEEGDSPLGDH   80 (88)
T ss_dssp             EEEEESSCCCCCSTTB-----------------CCCCTTEEEEEEEECTTSEEEEEETTEEEEEEGGGEEECCCCCSSSC
T ss_pred             CEEEEccccCCCCCCC-----------------cCCCCCCEEEEEEccCCCeEEEEECCcEEEEehHHEEECCCcccccC
Confidence            4456667777665555                 45999999999999999999999999999999999999976654444


Q ss_pred             CCCC
Q psy7077         325 GTEL  328 (336)
Q Consensus       325 ~~~~  328 (336)
                      +..+
T Consensus        81 ~~~~   84 (88)
T 2cub_A           81 VGSG   84 (88)
T ss_dssp             CCSS
T ss_pred             CCCC
Confidence            4433

>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A

Probab=99.33  E-value=3.6e-12  Score=94.60  Aligned_cols=59  Identities=20%  Similarity=0.386  Sum_probs=48.5

Q ss_pred             cccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCC---ceeEeeCCCeeecCCCCC
Q psy7077         246 ELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRG---QTGWFPESYVEPCDETGE  321 (336)
Q Consensus       246 ~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G---~~G~fPsnyV~~i~~~~~  321 (336)
                      .+.|.+++.+...++                 |+|++||+|.|+++.+++||.|+++|   ++||||+|||+.+.+..+
T Consensus        12 ~~~alydy~~~~~~e-----------------Lsf~~Gd~i~v~~~~~~~Ww~g~~~~~~g~~G~~P~~yv~~~~~~~p   73 (76)
T 2ed1_A           12 RVKTIYDCQADNDDE-----------------LTFIEGEVIIVTGEEDQEWWIGHIEGQPERKGVFPVSFVHILSDSGP   73 (76)
T ss_dssp             EEEESSCCCCSSSSB-----------------CCCCSSCEEEESSCCSSSEEEEEETTCTTCEEEEEGGGEEECCCCCC
T ss_pred             EEEECccCCCCCcCC-----------------cCcCCCCEEEEEEecCCCEEEEEECCCCCCEEEEehHHeEECCCCCC
Confidence            355667776665555                 55999999999999999999999877   999999999999976543

>1z9q_A Neutrophil cytosol factor 4; oxidoreductase activator; NMR {Homo sapiens}

Probab=99.33  E-value=1.4e-12  Score=97.70  Aligned_cols=56  Identities=25%  Similarity=0.313  Sum_probs=47.7

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~  319 (336)
                      +.|.+++.+...++                 |+|++||+|.|+++.+++||.|+.+|++||||+|||+.+.+.
T Consensus        21 ~~Alydy~a~~~~e-----------------Lsf~~Gd~I~Vl~~~~~gWw~g~~~g~~G~fP~nyV~~~~~~   76 (79)
T 1z9q_A           21 AEALFDFTGNSKLE-----------------LNFKAGDVIFLLSRINKDWLEGTVRGATGIFPLSFVKILKDF   76 (79)
T ss_dssp             EEESSCCCCSSTTB-----------------CCCCTTCCBCCCEESSSSEEEEEETTEEEEEEGGGEEESSCC
T ss_pred             EEEcCccCCCCCCc-----------------ccccCCCEEEEeEecCCCEEEEEECCeEEEecHHHEEECCCC
Confidence            45667776665555                 459999999999999999999999999999999999999754

>3o5z_A Phosphatidylinositol 3-kinase regulatory subunit; SRC homology 3 domain, protein binding; 2.01A {Homo sapiens} SCOP: b.34.2.0 PDB: 2kt1_A

Probab=99.33  E-value=6.1e-13  Score=102.15  Aligned_cols=61  Identities=34%  Similarity=0.638  Sum_probs=50.8

Q ss_pred             cceeeeeeeecccCCCCCCCCCCCCEEEEeee-----------ec--CCCCeEEEEe--eCceeeecccceeecCC
Q psy7077         168 EYRRYRAIYEFVSRNGDELSFQPGDIIMVPVK-----------QN--AEPGWLAGEL--RGQTGWFPESYVEPCDE  228 (336)
Q Consensus       168 ~~~~~~al~df~a~~~~eLs~~~Gdii~v~~~-----------~~--~~~gW~~g~~--~g~~G~fP~~yve~~~~  228 (336)
                      ....++|+|+|.++.++||+|++||+|.|+..           +.  .+.|||.|++  +|++||||+|||+.+..
T Consensus        10 ~~~~~~Alydy~a~~~~ELsf~~GD~I~V~~~~~~~l~~~~~~~~~~~~~gW~~G~~~~~g~~G~fP~nyVe~i~~   85 (90)
T 3o5z_A           10 EGFQYRALYPFRRERPEDLELLPGDVLVVSRAALQALGVAEGGERCPQSVGWMPGLNERTRQRGDFPGTYVEFLGP   85 (90)
T ss_dssp             SEEEEEECSCBCCCSTTBCCBCTTCEEEEEHHHHHHTTCCTTGGGCHHHHCEEEEEETTTCCEEEEEGGGEEEEEE
T ss_pred             CCcEEEEeeeECCCCCCccCCcCCCEEEEEeccccccccccccccCCCCCCceEEEeCCCCCEEEeehHHEEEecc
Confidence            35679999999999999999999999999621           11  2338999987  59999999999998863

>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A

Probab=99.32  E-value=2.7e-12  Score=91.87  Aligned_cols=41  Identities=37%  Similarity=0.770  Sum_probs=38.3

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  318 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~  318 (336)
                      |+|++||+|.|+++.+++||.|+.+|++||||+|||+.+.+
T Consensus        23 Ls~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~   63 (64)
T 2ak5_A           23 LSFSKGDVIHVTRVEEGGWWEGTHNGRTGWFPSNYVREIKP   63 (64)
T ss_dssp             CCBCTTCEEEEEECCTTSEEEEEETTEEEEEEGGGEEECCC
T ss_pred             ccCCCCCEEEEeEecCCCEEEEEECCCEEEEehHHeEEcCC
Confidence            55999999999999999999999999999999999998864

>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=3.9e-12  Score=94.19  Aligned_cols=43  Identities=26%  Similarity=0.394  Sum_probs=38.6

Q ss_pred             CCCCCCCCEEEEEe-ecCCCeEEEEeCCceeEeeCCCeeecCCC
Q psy7077         277 SPIMGLGTVVPVKQ-NAEPGWLAGELRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       277 ~Lsf~~Gd~V~V~~-~~~~~W~~g~~~G~~G~fPsnyV~~i~~~  319 (336)
                      +|+|++||+|.|++ ..+++||.|+++|++||||+|||+.+...
T Consensus        30 eLsf~~Gd~i~v~~~~~~~gWw~g~~~g~~G~fP~~yv~~~~~~   73 (75)
T 2ege_A           30 RLALRAGDVVMVYGPMDDQGFYYGELGGHRGLVPAHLLDHMSLH   73 (75)
T ss_dssp             BCCBCTTCEEEEESCCCTTCEEEEESSSCEEEEETTTEEECCCC
T ss_pred             cceECCCCEEEEeEccCCCCEEEEEECCcEEEEChHHeEEccCC
Confidence            46799999999997 58899999999999999999999998643

>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=9.6e-12  Score=92.94  Aligned_cols=56  Identities=20%  Similarity=0.353  Sum_probs=47.1

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~  319 (336)
                      .++.+++.+...++                 |+|++||+|.|+++.+++||.|+++|++||||+|||+.+...
T Consensus        20 ~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~   75 (79)
T 1x69_A           20 AVALYDYQAAGDDE-----------------ISFDPDDIITNIEMIDDGWWRGVCKGRYGLFPANYVELRQSG   75 (79)
T ss_dssp             EEESSCCCCSSSSB-----------------CCCCTTCEEEEEEECSSSEEEEEETTEEEEEETTSEEECCCC
T ss_pred             EEECccCCCCCCCC-----------------cCcCCCCEEEEeEecCCCeEEEEECCcEEEechHHEEECCCC
Confidence            45666666655444                 559999999999999999999999999999999999998754

>2o2o_A SH3-domain kinase-binding protein 1; CIN85, protein binding; NMR {Homo sapiens}

Probab=99.32  E-value=1.1e-12  Score=101.01  Aligned_cols=70  Identities=21%  Similarity=0.440  Sum_probs=51.9

Q ss_pred             ccccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCCCCCCC
Q psy7077         245 LELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVP  324 (336)
Q Consensus       245 ~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~~~~~~  324 (336)
                      ..+.+.+++.+...++                 |+|++||+|.|+++.+++||.|+++|++||||+|||+.+...++.  
T Consensus        19 ~~~~Alydy~a~~~~e-----------------Lsf~~Gd~i~V~~~~~~gWw~g~~~g~~G~fPsnyV~~~~~~~~~--   79 (92)
T 2o2o_A           19 RRCQVAFSYLPQNDDE-----------------LELKVGDIIEVVGEVEEGWWEGVLNGKTGMFPSNFIKELSGESDE--   79 (92)
T ss_dssp             CEEEECSCBCCCSSSC-----------------CCBCSSCEEECCCGGGSSCBCCEETTEECCBCSSSEECCSSCSST--
T ss_pred             eEEEEccccCCCCCcc-----------------ccccCCCEEEEeEecCCCEEEEEECCeEEEeehHHEEECCCCCcc--
Confidence            3456667776665555                 459999999999999999999999999999999999999865443  


Q ss_pred             CCCCCCCCCC
Q psy7077         325 GTELPGDKHH  334 (336)
Q Consensus       325 ~~~~~~~~~~  334 (336)
                       .-...|.||
T Consensus        80 -~~~~~~~~~   88 (92)
T 2o2o_A           80 -LGISQDEHH   88 (92)
T ss_dssp             -TTTCC----
T ss_pred             -cccchhhhc
Confidence             333445554

>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A

Probab=99.32  E-value=2.8e-12  Score=93.48  Aligned_cols=42  Identities=29%  Similarity=0.626  Sum_probs=38.2

Q ss_pred             CCCCCCCEEEEEeec--CCCeEEEEeCCceeEeeCCCeeecCCC
Q psy7077         278 PIMGLGTVVPVKQNA--EPGWLAGELRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~--~~~W~~g~~~G~~G~fPsnyV~~i~~~  319 (336)
                      |+|++||+|.|+++.  +++||.|+.+|++||||+|||+.+...
T Consensus        19 Ls~~~Gd~i~vl~~~~~~~gWw~g~~~g~~G~~P~~yV~~~~~~   62 (69)
T 2ydl_A           19 LTIKEGDIVTLINKDCIDVGWWEGELNGRRGVFPDNFVKLLPPL   62 (69)
T ss_dssp             CCBCTTCEEEEEESCCSSTTEEEEEETTEEEEEEGGGEEECCSC
T ss_pred             cccCCCCEEEEEEcCCCCCCEEEEEECCcEEEecHHHEEECCCC
Confidence            559999999999996  889999999999999999999998654

>2csq_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=8.5e-12  Score=97.04  Aligned_cols=48  Identities=19%  Similarity=0.277  Sum_probs=41.0

Q ss_pred             CCCCCCCEEEEEee-cCCCeEEEEeCCceeEeeCCCeeecCCCCCCCCC
Q psy7077         278 PIMGLGTVVPVKQN-AEPGWLAGELRGQTGWFPESYVEPCDETGEVVPG  325 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~-~~~~W~~g~~~G~~G~fPsnyV~~i~~~~~~~~~  325 (336)
                      |+|++||+|.|+++ +++|||.|+.+|++||||+|||+.+......+..
T Consensus        42 Lsf~~Gd~i~vl~~~~~~gWw~g~~~g~~G~~P~~yv~~~~~~~~~~~~   90 (97)
T 2csq_A           42 LPFKEGQIIKVYGDKDADGFYRGETCARLGLIPCNMVSEIQADDEEMMD   90 (97)
T ss_dssp             CCBCTTCEEEEEEEECTTCEEEEEETTEEEEEETTTSEECCCCSCCCCC
T ss_pred             cCCCCCCEEEEEEecCCCCeEEEEECCcEEEEehHHeEECCCCchhhhh
Confidence            66999999999965 6688999999999999999999999866555444

>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold protein 1, islet-brain-1, IB-1, mitogen-activated P kinase 8-interacting protein 1; 3.00A {Rattus norvegicus}

Probab=99.32  E-value=2.3e-12  Score=94.29  Aligned_cols=58  Identities=19%  Similarity=0.160  Sum_probs=45.6

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEE--eCCceeEeeCCCeeecCCCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGE--LRGQTGWFPESYVEPCDETGE  321 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~--~~G~~G~fPsnyV~~i~~~~~  321 (336)
                      ..+.+++.+...++                 |+|++||+|.|+++.++|||.|+  .+|++|+||+|||+.+...++
T Consensus         9 ~~al~~y~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~gW~~g~~~~~g~~G~fP~~yv~~~~~~~~   68 (71)
T 2fpf_A            9 HRAIFRFVPRHEDE-----------------LELEVDDPLLVELQAEDYWYEAYNMRTGARGVFPAYYAIEVTKEPE   68 (71)
T ss_dssp             EEECSCBCCSSTTB-----------------CCBCTTCEEEEEEECTTSEEEEEETTTTEEEEEEGGGEEECC----
T ss_pred             EEECeeECccCCCc-----------------ccCcCCcEEEEeEecCCCEEEEEECCCCCEEEeehHHEEECCCCCC
Confidence            35566666655555                 55999999999999999999998  799999999999999876543

>2oi3_A Tyrosine-protein kinase HCK; human HCK, SH3, SRC-type tyrosine kinase, transferase; NMR {Homo sapiens} PDB: 2oj2_A 4hck_A 5hck_A

Probab=99.32  E-value=2.5e-12  Score=97.69  Aligned_cols=56  Identities=27%  Similarity=0.522  Sum_probs=50.7

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe--eCceeeecccceeecC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPCD  227 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~--~g~~G~fP~~yve~~~  227 (336)
                      ...++|+|+|.++..+||+|++||+|.|+..  . ++||+|++  +|+.||||++||+.+.
T Consensus        25 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~--~-~~Ww~g~~~~~g~~G~~P~~yv~~~~   82 (86)
T 2oi3_A           25 DIIVVALYDYEAIHHEDLSFQKGDQMVVLEE--S-GEWWKARSLATRKEGYIPSNYVARVD   82 (86)
T ss_dssp             SEEEEESSCCCCSSSSCCCCCTTCEEEEEEE--S-SSEEEEEETTTCCEEEEEGGGEEEGG
T ss_pred             CcEEEECccCCCCCCCcCcCCCCCEEEEEEc--C-CCeEEEEECCCCCEEEEehHHcEEcc
Confidence            4679999999999999999999999999743  3 59999999  8999999999999875

>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.32  E-value=3.5e-12  Score=95.88  Aligned_cols=58  Identities=17%  Similarity=0.289  Sum_probs=49.9

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe--eCceeeecccceeecC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPCD  227 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~--~g~~G~fP~~yve~~~  227 (336)
                      ...++|+|||.++.++||+|++||+|.|+.. ..+++||.|+.  +|+.||||++||+...
T Consensus        17 ~~~~~Alydy~~~~~~eLsf~~Gd~i~v~~~-~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~   76 (81)
T 1x6g_A           17 GTQCITKCEHTRPKPGELAFRKGDVVTILEA-CENKSWYRVKHHTSGQEGLLAAGALRERS   76 (81)
T ss_dssp             TCEEEESSCBSSCCTTCCCBCTTCEEEEEEC-CCSSSEEEEEETTTCCEEEEEGGGEEECC
T ss_pred             CCEEEECCCCCcCCCCCCCCCCCCEEEEEec-cCCCCeEEEEeCCCCCEEEEehHHEEEcc
Confidence            4679999999999999999999999999642 23349999986  6999999999999765

>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MLY; 2.20A {Homo sapiens} PDB: 2frw_A 2js0_A

Probab=99.32  E-value=3.2e-12  Score=89.54  Aligned_cols=54  Identities=26%  Similarity=0.472  Sum_probs=45.2

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD  317 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~  317 (336)
                      +++.+++.+...++                 |+|++||+|.|+++.+++||.|+.+|+.|+||+|||+.+.
T Consensus         4 a~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~W~~g~~~g~~G~~P~~yv~~~~   57 (58)
T 4e6r_A            4 AFVXFAYVAEREDE-----------------LSLVXGSRVTVMEXCSDGWWRGSYNGQIGWFPSNYVLEEV   57 (58)
T ss_dssp             EEECSCBCCCSTTB-----------------CCBCTTCEEEEEEECTTSEEEEEETTEEEEEEGGGEEECC
T ss_pred             EEECccCCCCCCCE-----------------eeEeCCCEEEEeEcCCCCEEEEEECCcEEEEehHHEEECC
Confidence            45566666655444                 5599999999999999999999999999999999999764

>1hsq_A Phospholipase C-gamma (SH3 domain); phosphoric diester hydrolase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2hsp_A

Probab=99.32  E-value=3.6e-13  Score=98.69  Aligned_cols=58  Identities=31%  Similarity=0.674  Sum_probs=51.7

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCcee-eecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTG-WFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G-~fP~~yve~~~~  228 (336)
                      ...++|+|+|.++.++||+|++||+|.|+  ...++|||.|+++|+.| |||++||+.+..
T Consensus         6 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~--~~~~~~Ww~g~~~g~~gG~~P~~yv~~~~~   64 (71)
T 1hsq_A            6 KCAVKALFDYKAQREDELTFIKSAIIQNV--EKQEGGWWRGDYGGKKQLWFPSNYVEEMVN   64 (71)
T ss_dssp             SSCCCCSSCCCCSSSSSCCCCTTCCCBSC--CCBTTTEECCBCSSSCSCCEETTTCCSCSC
T ss_pred             CeEEEECCCCCcCCCCccCCCCCCEEEEE--EecCCCEEEEEECCeEEeEEChHHcEECCC
Confidence            45789999999999999999999999996  34678999999998886 999999998764

>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.31  E-value=4e-12  Score=92.90  Aligned_cols=57  Identities=16%  Similarity=0.203  Sum_probs=47.2

Q ss_pred             cccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeec---CCCeEEEEeCCceeEeeCCCeeecCCC
Q psy7077         246 ELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNA---EPGWLAGELRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       246 ~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~---~~~W~~g~~~G~~G~fPsnyV~~i~~~  319 (336)
                      .+.+.+++.+...++                 |+|++||+|.|+++.   +++||.|+.+|++||||+|||+.+...
T Consensus         9 ~~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~   68 (71)
T 2cre_A            9 LARALYDNCPDCSDE-----------------LAFSRGDILTILEQHVPESEGWWKCLLHGRQGLAPANRLQILSGP   68 (71)
T ss_dssp             EEEESSCCCCSSSSB-----------------CCCCSSCCEEEEESCCTTSTTEEEEESSSCCEEEETTTEEECCCS
T ss_pred             EEEECcccCcCCCCC-----------------CCCCCCCEEEEeEcCCCCCCCcEEEEECCCEEEEehHHEEECCCC
Confidence            345666666655554                 559999999999997   899999999999999999999998754

>1wie_A RIM binding protein 2; beta barrel, KIAA0318 protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.31  E-value=4.3e-12  Score=98.57  Aligned_cols=47  Identities=26%  Similarity=0.436  Sum_probs=40.9

Q ss_pred             CCCCCCCCEEEEE-eecCCCeEEEEe-CCceeEeeCCCeeecCCCCCCC
Q psy7077         277 SPIMGLGTVVPVK-QNAEPGWLAGEL-RGQTGWFPESYVEPCDETGEVV  323 (336)
Q Consensus       277 ~Lsf~~Gd~V~V~-~~~~~~W~~g~~-~G~~G~fPsnyV~~i~~~~~~~  323 (336)
                      +|+|++||+|.|+ ++.+++||.|++ +|++||||+|||+.+......+
T Consensus        39 eLsf~~Gd~i~v~~~~~~~gWw~g~~~~g~~G~~Psnyv~~~~~~~~~~   87 (96)
T 1wie_A           39 ELPLTAGKYLYVYGDMDEDGFYEGELLDGQRGLVPSNFVDFVQDNESRL   87 (96)
T ss_dssp             BCCCCTTCEEEEESSCCSSSCCEEEETTCCBCBCCTTSEECCCSCCCCS
T ss_pred             eeeECCCCEEEEeEecCCCCEEEEEECCCCEEEEchHHEEEcCCCCccc
Confidence            4669999999999 888899999998 9999999999999997654433

>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=5.7e-12  Score=92.70  Aligned_cols=57  Identities=19%  Similarity=0.288  Sum_probs=46.7

Q ss_pred             cccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEee---cCCCeEEEEeCCceeEeeCCCeeecCCC
Q psy7077         246 ELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQN---AEPGWLAGELRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       246 ~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~---~~~~W~~g~~~G~~G~fPsnyV~~i~~~  319 (336)
                      ...|.+++.+...++                 |+|++||+|.|+++   .+++||.|+.+|++||||+|||+++.+.
T Consensus        10 ~~~alydy~~~~~~e-----------------Lsf~~Gd~i~v~~~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~   69 (73)
T 2dl7_A           10 FVKALYDYEGQTDDE-----------------LSFPEGAIIRILNKENQDDDGFWEGEFNGRIGVFPSVLVEELSSG   69 (73)
T ss_dssp             EEEESSCBCCSSTTB-----------------CCBCTTCEEEEEECCCSSSSSCEEEEETTEEEEECSSSEEECCSS
T ss_pred             EEEECccCCcCCCCc-----------------CCCCCCCEEEEEECCCCCCCCcEEEEECCCEEEEChHHEEECCCC
Confidence            345666776665555                 55999999999998   4788999999999999999999999754

>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A

Probab=99.31  E-value=3.5e-12  Score=89.52  Aligned_cols=39  Identities=33%  Similarity=0.680  Sum_probs=36.7

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeec
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPC  316 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i  316 (336)
                      |+|++||+|.|+++.+++||.|+.+|++|+||+|||+++
T Consensus        19 Ls~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~   57 (58)
T 1zx6_A           19 LGLKPGDKVQLLEKLSPEWYKGSCNGRTGIFPANYVKPA   57 (58)
T ss_dssp             CCBCTTCEEEEEEECSSSEEEEEETTEEEEEEGGGEEEC
T ss_pred             ccCCCCCEEEEEEecCCCEEEEEECCcEEEeeHHHEEEc
Confidence            559999999999999999999999999999999999975

>1wi7_A SH3-domain kinase binding protein 1; beta barrel, SH3KBP1, RUK, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}

Probab=99.31  E-value=2e-12  Score=93.77  Aligned_cols=56  Identities=21%  Similarity=0.447  Sum_probs=46.9

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~  319 (336)
                      ..+.+++.+...++                 |+|++||+|.|+++.+++||.|+.+|++||||+|||+.+.+.
T Consensus        10 ~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~   65 (68)
T 1wi7_A           10 CQVAFSYLPQNDDE-----------------LELKVGDIIEVVGEVEEGWWEGVLNGKTGMFPSNFIKELSGP   65 (68)
T ss_dssp             EEESSCBCCSSTTB-----------------CCBCTTCEECCCEEEETTEEEECSTTCCEEEETTSEEECCSS
T ss_pred             EEECccCCcCCCCC-----------------ccCcCCCEEEEEEcCCCCeEEEEECCcEEEEchHHEEECCCC
Confidence            45566666655554                 559999999999999999999999999999999999998754

>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus}

Probab=99.30  E-value=2.4e-12  Score=90.99  Aligned_cols=53  Identities=19%  Similarity=0.256  Sum_probs=44.4

Q ss_pred             cccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeee
Q psy7077         246 ELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEP  315 (336)
Q Consensus       246 ~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~  315 (336)
                      .+.+.+++.+...++                 |+|++||+|.|+++.+++||.|+.+|++||||+|||++
T Consensus         8 ~~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~   60 (60)
T 2gnc_A            8 FAIAKFDYVGRSARE-----------------LSFKKGASLLLYHRASEDWWEGRHNGIDGLVPHQYIVV   60 (60)
T ss_dssp             EEEESSCBCCSSTTB-----------------CCBCTTCEEEEEEEEETTEEEEEETTEEEEEEGGGEEC
T ss_pred             EEEECCCCCcCCcCC-----------------cCCCCCCEEEEEEecCCCEEEEEECCeEEEEeHhhEEC
Confidence            345666776665555                 55999999999999889999999999999999999974

>2da9_A SH3-domain kinase binding protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.30  E-value=5.1e-12  Score=92.15  Aligned_cols=56  Identities=23%  Similarity=0.490  Sum_probs=46.5

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeec--CCCeEEEEeCCceeEeeCCCeeecCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNA--EPGWLAGELRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~--~~~W~~g~~~G~~G~fPsnyV~~i~~~  319 (336)
                      ..+.+++.+...++                 |+|++||+|.|+++.  +++||.|+.+|++||||+|||+.+...
T Consensus        10 ~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~~~W~~g~~~g~~G~~P~~yv~~~~~~   67 (70)
T 2da9_A           10 CKVIFPYEAQNDDE-----------------LTIKEGDIVTLINKDCIDVGWWEGELNGRRGVFPDNFVKLLSGP   67 (70)
T ss_dssp             EEECSCCCCSSTTB-----------------CCCCTTEEEEEEECCCSSTTEEEEECSSCEEEEEGGGEEECCCC
T ss_pred             EEECcCCCCCCcCE-----------------eeEcCCCEEEEEECCCCCCCeEEEEECCcEEEechHHeEECCCC
Confidence            45666666665555                 559999999999985  889999999999999999999999754

>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A

Probab=99.30  E-value=3.7e-12  Score=89.31  Aligned_cols=40  Identities=35%  Similarity=0.704  Sum_probs=37.3

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD  317 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~  317 (336)
                      |+|++||+|.|+++.+++||.|+.+|++|+||+|||+.++
T Consensus        19 Ls~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~   58 (58)
T 2vwf_A           19 LGFRRGDFIHVMDNSDPNWWKGACHGQTGMFPRNYVTAVN   58 (58)
T ss_dssp             CCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEECC
T ss_pred             cCCCCCCEEEEEEcCCCCEEEEEECCcEEEEchHHeEECC
Confidence            5599999999999999999999999999999999999874

>1x43_A Endophilin B1, SH3 domain GRB2-like protein B1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.30  E-value=1e-11  Score=93.29  Aligned_cols=58  Identities=21%  Similarity=0.244  Sum_probs=47.8

Q ss_pred             cccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEee--cCCCeEEEEeCCceeEeeCCCeeecCCCC
Q psy7077         246 ELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQN--AEPGWLAGELRGQTGWFPESYVEPCDETG  320 (336)
Q Consensus       246 ~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~--~~~~W~~g~~~G~~G~fPsnyV~~i~~~~  320 (336)
                      .+.+.++|.+...++                 |+|++||+|.|+++  .+++||.|+.+|++||||+|||+.+...+
T Consensus        19 ~~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~~   78 (81)
T 1x43_A           19 KARVLYDYDAANSTE-----------------LSLLADEVITVFSVVGMDSDWLMGERGNQKGKVPITYLELLNSGP   78 (81)
T ss_dssp             EEEESSCCCCSSTTB-----------------CCCCTTCEEEEECCTTCCTTEEEEEETTEEEEEEGGGEEECCCCC
T ss_pred             EEEEcccCCCCCCCc-----------------CCCCCCCEEEEEEcCCCCCCcEEEEECCCEEEEehHHEEECCCCC
Confidence            356667777666555                 45999999999999  46899999999999999999999997543

>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens}

Probab=99.30  E-value=6.4e-12  Score=92.40  Aligned_cols=57  Identities=23%  Similarity=0.460  Sum_probs=47.1

Q ss_pred             cccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeec--CCCeEEEEeCCceeEeeCCCeeecCCC
Q psy7077         246 ELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNA--EPGWLAGELRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       246 ~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~--~~~W~~g~~~G~~G~fPsnyV~~i~~~  319 (336)
                      ...+.+++.+...++                 |+|++||+|.|+++.  +++||.|+.+|++||||+|||+.+...
T Consensus        11 ~~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~~~W~~g~~~g~~G~~P~~yv~~~~~~   69 (73)
T 2k9g_A           11 YCKVIFPYEAQNDDE-----------------LTIKEGDIVTLINKDCIDVGWWEGELNGRRGVFPDNFVKLLPPD   69 (73)
T ss_dssp             EEEECSCBCCSSTTB-----------------CCBCTTCEEEEEECCSSSTTEEEEEETTEEEEEEGGGEEECCSS
T ss_pred             EEEECccCCCCCCCe-----------------eeECCCCEEEEEECCCCCCCEEEEEECCeEEEEchHHEEECCcc
Confidence            345667776665555                 459999999999985  889999999999999999999998654

>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.30  E-value=3.4e-12  Score=95.49  Aligned_cols=57  Identities=18%  Similarity=0.286  Sum_probs=50.6

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe--eCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~--~g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|||.++..+||+|++||+|.|+.   .+++||.++.  +|+.||||++||+.+..
T Consensus        17 ~~~~~Alydy~a~~~~eLs~~~Gd~i~v~~---~~~~Ww~~~~~~~g~~G~~P~~yv~~~~~   75 (79)
T 2cud_A           17 SDFLAVLSDYPSPDISPPIFRRGEKLRVIS---DEGGWWKAISLSTGRESYIPGICVARVSG   75 (79)
T ss_dssp             CCEEEESSCSSCTTTSCCSSCTTCEEEEEE---EETTEEEEEETTTCCEEEEEGGGEEEECC
T ss_pred             CeEEEEccCCCCCCCCcCCCCCCCEEEEEe---cCCCeEEEEECCCCCEEEeeHHHeEEccC
Confidence            457999999999999999999999999974   3578999996  48999999999998763

>2vkn_A Protein SSU81; membrane, SH3 domain, transmembrane, membrane; 2.05A {Saccharomyces cerevisiae}

Probab=99.30  E-value=2.4e-12  Score=93.91  Aligned_cols=57  Identities=30%  Similarity=0.598  Sum_probs=49.2

Q ss_pred             ceeeeeeeecccCCCC--CCCCCCCCEEEEeeeecCCCCeEEEE-eeCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGD--ELSFQPGDIIMVPVKQNAEPGWLAGE-LRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~--eLs~~~Gdii~v~~~~~~~~gW~~g~-~~g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|+|.++..+  ||+|++||+|.|+.   .++|||.|+ .+|+.||||++||+.+..
T Consensus         5 ~~~~~alydy~~~~~~~~eLsf~~Gd~i~v~~---~~~~Ww~g~~~~g~~G~~P~~yv~~~~~   64 (70)
T 2vkn_A            5 IYKAKALYPYDADDDDAYEISFEQNEILQVSD---IEGRWWKARRANGETGIIPSNYVQLIDG   64 (70)
T ss_dssp             EEEEEESSCBCCCSSSTTBCCBCTTCEEEEEC---TTSSEEEEECTTSCEEEEEGGGEEEEEE
T ss_pred             CEEEEECccCCCCCCCCCcccCCCCCEEEEEE---cCCCeEEEEECCCCEEEEehHHEEECCC
Confidence            3578999999998655  99999999999953   368999997 589999999999998763

>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A

Probab=99.30  E-value=4.2e-12  Score=89.02  Aligned_cols=39  Identities=36%  Similarity=0.785  Sum_probs=36.5

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeec
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPC  316 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i  316 (336)
                      |+|++||+|.|+++.+++||.++.+|+.||||+|||+.+
T Consensus        20 Ls~~~Gd~i~v~~~~~~~W~~g~~~g~~G~~P~~yv~~l   58 (58)
T 2drm_A           20 LTFKEGDTIIVHQKDPAGWWEGELNGKRGWVPANYVQDI   58 (58)
T ss_dssp             CCBCTTCEEEEEECCTTSEEEEEETTEEEEEEGGGEEEC
T ss_pred             cCCCCCCEEEEEEecCCCEEEEEECCcEEEEeHHHEEEC
Confidence            559999999999999999999999999999999999875

>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.30  E-value=1.2e-11  Score=92.51  Aligned_cols=61  Identities=26%  Similarity=0.437  Sum_probs=48.1

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeC-----CceeEeeCCCeeecCCCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELR-----GQTGWFPESYVEPCDETGE  321 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~-----G~~G~fPsnyV~~i~~~~~  321 (336)
                      ..+.++|.+...++                 |+|++||+|.|+++.+++||.|+..     |++||||+|||+.++....
T Consensus        10 ~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~gWw~g~~~~~g~~~~~G~fP~~yv~~~~~~~~   72 (80)
T 1ue9_A           10 AQVTSAYVASGSEQ-----------------LSLAPGQLILILKKNTSGWWQGELQARGKKRQKGWFPASHVKLLGPSSE   72 (80)
T ss_dssp             EEECSCCCCCSTTB-----------------CCCCTTCEEEEEEECSSSEEEEEECSCCSSCCEEEEETTSEEECCSCCS
T ss_pred             EEECcccCCCCCCC-----------------CCCCCCCEEEEEEecCCCcEEEEECCCCCCCcEEEEchHHeEECCCCCC
Confidence            45566666655544                 5599999999999999999999886     5999999999999976544


Q ss_pred             CCC
Q psy7077         322 VVP  324 (336)
Q Consensus       322 ~~~  324 (336)
                      ...
T Consensus        73 ~~~   75 (80)
T 1ue9_A           73 RAS   75 (80)
T ss_dssp             SCC
T ss_pred             CCC
Confidence            333

>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.30  E-value=5.3e-12  Score=94.58  Aligned_cols=59  Identities=29%  Similarity=0.447  Sum_probs=48.0

Q ss_pred             cccccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecC--CCeEEEEeCCceeEeeCCCeeecCCC
Q psy7077         244 HLELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAE--PGWLAGELRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       244 ~~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~--~~W~~g~~~G~~G~fPsnyV~~i~~~  319 (336)
                      .....+.+++.+...++                 |+|++||+|.|+++.+  ++||.|+.+|++||||+|||+++...
T Consensus        17 ~~~~~al~dy~~~~~~e-----------------Lsf~~Gd~i~v~~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~   77 (80)
T 2d8h_A           17 PIEVTALYSFEGQQPGD-----------------LNFQAGDRITVISKTDSHFDWWEGKLRGQTGIFPANYVTMNSGP   77 (80)
T ss_dssp             CEEEECSSCEECSSTTB-----------------CEECTTCEEEEEECCSCSSSEEEEEETTEEEEEEGGGCCBCCCC
T ss_pred             CEEEEECccCCcCCCCe-----------------eeEcCCCEEEEeECcCCCCCeEEEEECCEEEEEchhHeEEcCCC
Confidence            34456677777666555                 4599999999999975  89999999999999999999988654

>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.30  E-value=1.4e-11  Score=94.07  Aligned_cols=59  Identities=17%  Similarity=0.302  Sum_probs=48.7

Q ss_pred             cccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCCCC
Q psy7077         246 ELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGE  321 (336)
Q Consensus       246 ~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~~~  321 (336)
                      ...+.|+|.+...++                 |+|++||+|.|+++.+++||.|+.+|++||||+|||+.+.....
T Consensus        19 ~~~Alydy~~~~~~e-----------------Lsf~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~~~   77 (88)
T 1x2q_A           19 KVRALYDFEAVEDNE-----------------LTFKHGEIIIVLDDSDANWWKGENHRGIGLFPSNFVTTNLNIET   77 (88)
T ss_dssp             EEEESSCCCCCSSSC-----------------CCCCSSCEEEEEECSCSSSEEEEETTEEEEECGGGEESCSSCCS
T ss_pred             EEEEcccCCCCCcCc-----------------cCCCCCCEEEEEEeCCCCEEEEEECCcEEEEehHHEEEcCCcCc
Confidence            345667777665555                 45999999999999999999999999999999999998865433

>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=9.7e-12  Score=92.88  Aligned_cols=58  Identities=26%  Similarity=0.444  Sum_probs=47.9

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGE  321 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~~~  321 (336)
                      ..+.+++.+...++                 |+|++||+|.|+++.+++||.++.+|++||||+|||+.+.....
T Consensus        10 ~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~~~   67 (79)
T 2yun_A           10 CKALYSFQARQDDE-----------------LNLEKGDIVIIHEKKEEGWWFGSLNGKKGHFPAAYVEELPSNAG   67 (79)
T ss_dssp             EEESSCBCCSSTTB-----------------CCBCTTCEEEEEECCSSSCEEEESSSCEEEECSTTEEEESSCSS
T ss_pred             EEECccCCcCCCCC-----------------cCCCCCCEEEEEEcCCCCEEEEEECCCEEEEEhHHeEECCCCCC
Confidence            45566666655554                 55999999999999999999999999999999999999976533

>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens}

Probab=99.29  E-value=5.8e-12  Score=91.57  Aligned_cols=56  Identities=25%  Similarity=0.381  Sum_probs=46.8

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~  319 (336)
                      ..+.+++.+...++                 |+|++||+|.|+++.+++||.++.+|++||||+|||+.++..
T Consensus        11 ~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~   66 (69)
T 2dil_A           11 YRALYDYTAQNPDE-----------------LDLSAGDILEVILEGEDGWWTVERNGQRGFVPGSYLEKLSGP   66 (69)
T ss_dssp             EECCSCBCCSSSSS-----------------CCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGCCBCCCS
T ss_pred             EEECccCCccCcCc-----------------cCCCCCCEEEEEECCCCCEEEEEECCCEEEEehHHeEEcCCC
Confidence            45566666655555                 559999999999999999999999999999999999998754

>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A

Probab=99.29  E-value=4.6e-12  Score=91.88  Aligned_cols=55  Identities=20%  Similarity=0.348  Sum_probs=45.3

Q ss_pred             cccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCC-----ceeEeeCCCeeecC
Q psy7077         246 ELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRG-----QTGWFPESYVEPCD  317 (336)
Q Consensus       246 ~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G-----~~G~fPsnyV~~i~  317 (336)
                      ...|.+++.+...++                 |+|++||+|.|+++.+++||.|+.+|     ++|+||+|||++++
T Consensus         9 ~~~Alydy~~~~~~e-----------------Lsf~~Gd~i~v~~~~~~~Ww~g~~~~~g~~~~~G~fP~~yv~~~~   68 (68)
T 1tg0_A            9 KVVAQFPYKSDYEDD-----------------LNFEKDQEIIVTSVEDAEWYFGEYQDSNGDVIEGIFPKSFVAVQG   68 (68)
T ss_dssp             EEEESSCBCCSCTTB-----------------CCBCTTCEEEEEEECSSSEEEEEEECTTSCEEEEEEEGGGEEECC
T ss_pred             EEEECeeECcCCcCC-----------------CCCCCCCEEEEEEecCCCeEEEEECCCCCCCEEEEEchHHEEECC
Confidence            356667776665555                 55999999999999999999999876     99999999999763

>1ugv_A KIAA0621, olygophrenin-1 like protein; beta barrel, GRAF protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.29  E-value=3.4e-12  Score=93.75  Aligned_cols=56  Identities=34%  Similarity=0.501  Sum_probs=46.2

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEe-ecCCCeEEEEeCCceeEeeCCCeeecCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQ-NAEPGWLAGELRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~-~~~~~W~~g~~~G~~G~fPsnyV~~i~~~  319 (336)
                      ..+.+++.+...++                 |+|++||+|.|++ ..+++||.|+.+|++|+||+|||+.+...
T Consensus        13 ~~alydy~~~~~~e-----------------Lsf~~Gd~i~v~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~   69 (72)
T 1ugv_A           13 AKALYACKAEHDSE-----------------LSFTAGTVFDNVHPSQEPGWLEGTLNGKTGLIPENYVEFLSGP   69 (72)
T ss_dssp             EEESSCBCCCSSSB-----------------CCBCTTCEEBSCCBCSSTTEEEEESSSCEEEEEGGGEEECCSS
T ss_pred             EEEccccCCcCCCE-----------------eCCcCCCEEEEEEecCCCCeEEEEECCcEEEecHHHEEECCCC
Confidence            45666776665555                 5599999999997 47889999999999999999999999754

>2rqv_A BUD emergence protein 1; BEM1P, SH3, CDC42P, cytoplasm, cytoskeleton, SH3 domain, SIG protein; NMR {Saccharomyces cerevisiae} PDB: 2rqw_A

Probab=99.29  E-value=1.3e-12  Score=103.57  Aligned_cols=58  Identities=21%  Similarity=0.379  Sum_probs=51.0

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCce---eeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQT---GWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~---G~fP~~yve~~~~  228 (336)
                      ...++|+|||.++.++||+|++||+|.|+.  ..+++||.|+++|+.   |+||+|||+.+..
T Consensus         5 ~~~~~Alydy~a~~~~ELsf~~Gd~i~vl~--~~~~~Ww~g~~~g~~g~~G~fPsnYV~~~~~   65 (108)
T 2rqv_A            5 SLYAIVLYDFKAEKADELTTYVGENLFICA--HHNCEWFIAKPIGRLGGPGLVPVGFVSIIDI   65 (108)
T ss_dssp             CCCEEESSCCCCCSSSBCCCCSSEEECCCC--EETTTEEEECCSSSSCCCEEEESTTCBCCCS
T ss_pred             CeEEEECCCcCCCCCCcCCcCCCCEEEEeE--ecCCCEEEEEECCccCCeeEeecceEEEecC
Confidence            356899999999999999999999999964  357899999987766   9999999998764

>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.29  E-value=5.7e-12  Score=91.90  Aligned_cols=56  Identities=21%  Similarity=0.429  Sum_probs=47.0

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~  319 (336)
                      ..+.+++.+...++                 |+|++||+|.|+++.+++||.++.+|++||||+|||+.+...
T Consensus        11 ~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~   66 (70)
T 2ega_A           11 YVVVSNYKKQENSE-----------------LSLQAGEVVDVIEKNESGWWFVSTSEEQGWVPATYLEAQNSG   66 (70)
T ss_dssp             EECCSCCCCCSSSS-----------------CCCCTTCBCEEEEECTTSEEEEECSSCEEEEEGGGCEESCCC
T ss_pred             EEECceECCCCCCc-----------------ccCCCCCEEEEEEccCCCeEEEEECCCEEEEehHHcEECCCC
Confidence            45556666655555                 559999999999999999999999999999999999998754

>4glm_A Dynamin-binding protein; SH3 domain, DNMBP, structural genomics, structural genomics consortium, SGC, SRC homology 3 domains, cell junctions; 1.90A {Homo sapiens}

Probab=99.29  E-value=4.4e-12  Score=92.82  Aligned_cols=42  Identities=33%  Similarity=0.721  Sum_probs=38.0

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~  319 (336)
                      |+|++||+|.|+++.+++||.|+.+|++|+||+|||+.+++.
T Consensus        30 Ls~~~Gd~i~v~~~~~~~W~~g~~~g~~G~~P~~yv~~~~~~   71 (72)
T 4glm_A           30 LDFEVGDKIRILATLEDGWLEGSLKGRTGIFPYRFVKLCPAA   71 (72)
T ss_dssp             CCBCTTCEEEEEEECSTTEEEEEETTEEEEEEGGGEEEEC--
T ss_pred             CCCCCCCEEEEEEccCCCEEEEEECCcEEEEChHHeEECCCC
Confidence            559999999999999999999999999999999999998653

>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin SH3 domain, SPC-S19P20S circular permutant, S protein; NMR {Synthetic}

Probab=99.29  E-value=5.8e-12  Score=92.67  Aligned_cols=42  Identities=21%  Similarity=0.499  Sum_probs=39.2

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~  319 (336)
                      |+|++||+|.|+++.+++||.|+.+|+.||||+|||+.+++.
T Consensus        16 Ls~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~   57 (73)
T 2kxd_A           16 VTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLDSG   57 (73)
T ss_dssp             CCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEECCSS
T ss_pred             eeEcCCCEEEEEEecCCCEEEEEECCCEEEEehHHeEEcCCC
Confidence            569999999999999999999999999999999999999754

>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A

Probab=99.29  E-value=4.9e-12  Score=89.34  Aligned_cols=39  Identities=28%  Similarity=0.651  Sum_probs=35.8

Q ss_pred             CCCCCCCEEEEEeec--CCCeEEEEeCCceeEeeCCCeeec
Q psy7077         278 PIMGLGTVVPVKQNA--EPGWLAGELRGQTGWFPESYVEPC  316 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~--~~~W~~g~~~G~~G~fPsnyV~~i  316 (336)
                      |+|++||+|.|+++.  +++||.|+.+|++|+||+|||+++
T Consensus        20 Ls~~~Gd~i~v~~~~~~~~~Ww~g~~~g~~G~~P~~yv~~l   60 (60)
T 1oot_A           20 LPFRKGDVITILKKSDSQNDWWTGRVNGREGIFPANYVELV   60 (60)
T ss_dssp             CCBCTTCEEEEEECCSCTTSEEEEEETTEEEEEEGGGEEEC
T ss_pred             eeEcCCCEEEEEEeCCCCCCeEEEEECCEEEEEeHHHEEEC
Confidence            559999999999987  789999999999999999999875

>2yup_A Vinexin; sorbin and SH3 domain-containing protein 3, SH3-containing adapter molecule 1, SCAM-1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.29  E-value=9.3e-12  Score=95.42  Aligned_cols=60  Identities=22%  Similarity=0.309  Sum_probs=49.2

Q ss_pred             ccccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeC--CceeEeeCCCeeecCCCCC
Q psy7077         245 LELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELR--GQTGWFPESYVEPCDETGE  321 (336)
Q Consensus       245 ~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~--G~~G~fPsnyV~~i~~~~~  321 (336)
                      ..+++.|++.+...++                 |+|++||+|.|+++.+++||.|+.+  |++||||+|||+.+...+.
T Consensus        18 ~~~~alydy~~~~~~e-----------------Lsf~~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~fP~~yv~~~~~~~~   79 (90)
T 2yup_A           18 GEAVAQYTFKGDLEVE-----------------LSFRKGEHICLIRKVNENWYEGRITGTGRQGIFPASYVQVSREPRL   79 (90)
T ss_dssp             EEEEECSCCCCCSSSB-----------------CCCCTTCEEEESSCCCSSEEEEECTTTCCEEEEEGGGEEEEECCCC
T ss_pred             eEEEEeecCCcCCcCc-----------------CCCCCCCEEEEEEEcCCCeEEEEECCCCCEEEEehHHeEEcCCCcc
Confidence            3456667777665555                 5599999999999999999999987  9999999999999976533

>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A*

Probab=99.29  E-value=5.8e-12  Score=89.62  Aligned_cols=40  Identities=23%  Similarity=0.325  Sum_probs=36.8

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEE--eCCceeEeeCCCeeecC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGE--LRGQTGWFPESYVEPCD  317 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~--~~G~~G~fPsnyV~~i~  317 (336)
                      |+|++||+|.|+++.+++||.|+  .+|++|+||+|||+.+.
T Consensus        20 Ls~~~Gd~i~v~~~~~~~W~~g~~~~~g~~G~fP~~yv~~~~   61 (62)
T 2fpe_A           20 LELEVDDPLLVELQAEDYWYEAYNMRTGARGVFPAYYAIEVT   61 (62)
T ss_dssp             CCBCTTCEEEEEEECTTSEEEEEETTTCCEEEEEGGGEEECC
T ss_pred             CcCCCCCEEEEEEecCCCEEEEEECCCCCEEEechHHEEECc
Confidence            55999999999999999999998  68999999999999874

>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=7.1e-12  Score=91.60  Aligned_cols=57  Identities=23%  Similarity=0.440  Sum_probs=47.6

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETG  320 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~~  320 (336)
                      .++.+++.+...++                 |+|++||+|.|+++.+++||.++.+|+.||||+|||+.++...
T Consensus        11 ~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~~   67 (71)
T 2dnu_A           11 YVTVQPYTSQSKDE-----------------IGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYLKKAKDSG   67 (71)
T ss_dssp             EECSSCBCCSSTTB-----------------CCBCTTCEEEECCCCSSSEEEEEETTEEEEEEGGGCEECCCCC
T ss_pred             EEECCccCCCCCCC-----------------CcCCCCCEEEEeECCCCCeEEEEECCcEEEEEHHHeEEccCCC
Confidence            45566666655555                 5599999999999999999999999999999999999997654

>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1

Probab=99.28  E-value=6.7e-12  Score=94.80  Aligned_cols=57  Identities=16%  Similarity=0.314  Sum_probs=48.0

Q ss_pred             cccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCC
Q psy7077         246 ELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       246 ~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~  319 (336)
                      .+.|.+++.+...++                 |+|++||+|.|+++.+++||.|+.+|++||||+|||+.+++.
T Consensus        19 ~~~Alydy~a~~~~e-----------------Lsf~~Gd~i~Vl~~~~~gWw~g~~~g~~G~~P~~yv~~~~~~   75 (83)
T 1neg_A           19 LVLALYDYQEKSPRE-----------------VTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLAAA   75 (83)
T ss_dssp             EEEESSCBCCSSTTB-----------------CCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEECCTT
T ss_pred             EEEEccccCCCCCCc-----------------cccCCCCEEEEEEecCCCEEEEEECCeEEEEEHHHEEECCCC
Confidence            346667777666555                 459999999999999999999999999999999999998653

>1uhf_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.28  E-value=3.7e-12  Score=92.74  Aligned_cols=56  Identities=29%  Similarity=0.528  Sum_probs=45.8

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETG  320 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~~  320 (336)
                      ..+.+++.+...++                 |+|++||+|.|+++ +++||.|+.+|++||||+|||+.++..+
T Consensus        11 ~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~-~~~Ww~g~~~g~~G~~P~~yv~~~~~~~   66 (69)
T 1uhf_A           11 YIALYPYSSVEPGD-----------------LTFTEGEEILVTQK-DGEWWTGSIGDRSGIFPSNYVKPKDSGP   66 (69)
T ss_dssp             EECSSCBCCSSSSB-----------------CCBCTTCEEEECEE-ETTEEEECSTTCCEEECGGGCEECCCCC
T ss_pred             EEEeeeECCCCcCc-----------------cCCCCCCEEEEEEe-CCCEEEEEeCCcEEEEchHHeEECCCCC
Confidence            45666666655544                 55999999999998 7889999999999999999999987543

>1j3t_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.28  E-value=1e-11  Score=91.57  Aligned_cols=57  Identities=23%  Similarity=0.426  Sum_probs=46.3

Q ss_pred             cccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCCC
Q psy7077         246 ELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETG  320 (336)
Q Consensus       246 ~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~~  320 (336)
                      .+.+.+++.+...++                 |+|++||+|.|++++ ++||.|+.+|++||||+|||+.+....
T Consensus        12 ~~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~-~~Ww~g~~~g~~G~~P~~yv~~~~~~~   68 (74)
T 1j3t_A           12 KAQALCSWTAKKDNH-----------------LNFSKHDIITVLEQQ-ENWWFGEVHGGRGWFPKSYVKIIPGSE   68 (74)
T ss_dssp             EEEESSCBCCCSTTB-----------------CCBCTTCEEEEEEEC-SSEEEEESTTCCCEEEGGGEEECCCST
T ss_pred             EEEECCCCCCCCCCc-----------------cCCCCCCEEEEEecC-CCEEEEEECCcEEEEchHHeEECCCCC
Confidence            345666676665554                 559999999999995 789999999999999999999997543

>3u23_A CD2-associated protein; structural genomics, structural genomics consortium, SGC, BE barrel, adaptor protein, protein binding; 1.11A {Homo sapiens} PDB: 2krn_A

Probab=99.28  E-value=4.3e-12  Score=90.92  Aligned_cols=41  Identities=24%  Similarity=0.675  Sum_probs=37.7

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  318 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~  318 (336)
                      |+|++||+|.|+++.+++||.|+.+|+.|+||+|||+.++.
T Consensus        24 Ls~~~Gd~i~v~~~~~~~W~~g~~~g~~G~~P~~yv~~~~~   64 (65)
T 3u23_A           24 LELKVGDIIDINEEVEEGWWSGTLNNKLGLFPSNFVKELEV   64 (65)
T ss_dssp             CCBCTTCEEEEEEEEETTEEEEEETTEEEEEEGGGEEECC-
T ss_pred             cCCCCCCEEEEEEecCCCEEEEEECCCEEEeehHHEEECcC
Confidence            55999999999999999999999999999999999999864

>2dm1_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.28  E-value=8e-12  Score=91.93  Aligned_cols=57  Identities=30%  Similarity=0.540  Sum_probs=46.3

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeec--CCCeEEEEeCCceeEeeCCCeeecCCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNA--EPGWLAGELRGQTGWFPESYVEPCDETG  320 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~--~~~W~~g~~~G~~G~fPsnyV~~i~~~~  320 (336)
                      .++.+++.+...++                 |+|++||+|.|+++.  +++||.|+.+|++||||+|||+.+...+
T Consensus        10 ~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~~   68 (73)
T 2dm1_A           10 AVARYNFAARDMRE-----------------LSLREGDVVRIYSRIGGDQGWWKGETNGRIGWFPSTYVEEEGIQS   68 (73)
T ss_dssp             EEESSCBCCCSTTB-----------------CCBCTTCEEECCBSSSSSSSCEEEEETTEEEEECSSSEEECCCCC
T ss_pred             EEECccCCcCCCCc-----------------CCCCCCCEEEEEEecCCCCCeEEEEECCeEEEeehHHEEEcCCCC
Confidence            45666666665555                 559999999999987  4599999999999999999999987543

>2csi_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=6.9e-12  Score=93.05  Aligned_cols=43  Identities=26%  Similarity=0.513  Sum_probs=38.4

Q ss_pred             CCCCCCCCEEEEEeecC-CCeEEEEeCCceeEeeCCCeeecCCC
Q psy7077         277 SPIMGLGTVVPVKQNAE-PGWLAGELRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       277 ~Lsf~~Gd~V~V~~~~~-~~W~~g~~~G~~G~fPsnyV~~i~~~  319 (336)
                      +|+|++||+|.|+++.+ +|||.|+++|++||||+|||+.+...
T Consensus        30 eLsf~~Gd~i~v~~~~~~~gWw~g~~~g~~G~~P~~yv~~~~~~   73 (76)
T 2csi_A           30 ELTFCTGDIITVFGEIDEDGFYYGELNGQKGLVPSNFLEEVSGP   73 (76)
T ss_dssp             SCCCCTTCEEEEESSCCSSSEEEEEETTEEEEEEGGGCCBCCCC
T ss_pred             cccCCCCCEEEEeEecCCCCeEEEEECCcEEEEehHHEEECCCC
Confidence            46799999999999876 58999999999999999999998654

>1ujy_A RHO guanine nucleotide exchange factor 6; structural genomics, SH3 domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.28  E-value=2.4e-12  Score=95.49  Aligned_cols=57  Identities=28%  Similarity=0.558  Sum_probs=47.4

Q ss_pred             cccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCC
Q psy7077         246 ELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       246 ~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~  319 (336)
                      ...+.+++.+...++                 |+|++||+|.|+++.+++||.|+.+|++||||+|||+.+...
T Consensus        12 ~~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~   68 (76)
T 1ujy_A           12 IVKARFNFKQTNEDE-----------------LSVCKGDIIYVTRVEEGGWWEGTLNGRTGWFPSNYVREIKSS   68 (76)
T ss_dssp             EEECCSCBCCSSTTS-----------------CCBCSSCCEEESSCCSSSCEEEEETTEEEEECTTTSEECCHH
T ss_pred             EEEECccCCcCCCCc-----------------ccCCCCCEEEEEEecCCCEEEEEECCCEEEechHHEEECCcc
Confidence            345666666665555                 559999999999999999999999999999999999998644

>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=1.2e-11  Score=92.23  Aligned_cols=61  Identities=20%  Similarity=0.350  Sum_probs=48.9

Q ss_pred             cccccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecC-CCeEEEEeC-CceeEeeCCCeeecCCCCC
Q psy7077         244 HLELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAE-PGWLAGELR-GQTGWFPESYVEPCDETGE  321 (336)
Q Consensus       244 ~~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~-~~W~~g~~~-G~~G~fPsnyV~~i~~~~~  321 (336)
                      .....+.+++.+...++                 |+|++||+|.|+++.+ ++||.++.. |++||||+|||++++..++
T Consensus        13 ~~~~~alydy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~~~~~   75 (78)
T 2dl5_A           13 PLTCKVVYSYKASQPDE-----------------LTIEEHEVLEVIEDGDMEDWVKARNKVGQVGYVPEKYLQFPTSSGP   75 (78)
T ss_dssp             SEEEEECSCBCCCSTTB-----------------CCBCSSEEEEEEECCSSSSEEEEECTTCCEEEEETTTSCCSCCCCS
T ss_pred             CcEEEEceeECCCCCCC-----------------CCCCCCCEEEEEeccCCCCcEEEEeCCCCEEEEEhHHEEECCCCCC
Confidence            34456677777666555                 4599999999999975 899999986 9999999999999875543

>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ...

Probab=99.28  E-value=6.4e-12  Score=89.19  Aligned_cols=40  Identities=20%  Similarity=0.536  Sum_probs=37.4

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD  317 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~  317 (336)
                      |+|++||+|.|+++.+++||.|+.+|+.|+||+|||+.++
T Consensus        23 Ls~~~Gd~i~v~~~~~~~Ww~~~~~g~~G~~P~~yv~~~d   62 (62)
T 3ngp_A           23 LTVKKGDILTLLNSTNKDWWKIEVNGRQGFVPAAYLKKLD   62 (62)
T ss_dssp             CCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEECC
T ss_pred             ccCCCCCEEEEeEecCCCeEEEEECCEEEEEEHHHEEECC
Confidence            5599999999999999999999999999999999999874

>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A

Probab=99.28  E-value=7.2e-12  Score=90.00  Aligned_cols=40  Identities=23%  Similarity=0.297  Sum_probs=36.9

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEE--eCCceeEeeCCCeeecC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGE--LRGQTGWFPESYVEPCD  317 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~--~~G~~G~fPsnyV~~i~  317 (336)
                      |+|++||+|.|+++.+++||.|+  .+|++|+||+|||+.++
T Consensus        23 Ls~~~Gd~i~v~~~~~~gW~~g~~~~~g~~G~~P~~yv~~~~   64 (65)
T 2j05_A           23 ISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEVG   64 (65)
T ss_dssp             CCBCTTCEEEEEEECTTSEEEEEETTTCCEEEEEGGGEEECC
T ss_pred             CcCCCCCEEEEeEecCCCEEEEEECCCCCEEEEEhHHeEECc
Confidence            55999999999999999999998  68999999999999875

>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1

Probab=99.27  E-value=5.8e-12  Score=90.62  Aligned_cols=42  Identities=24%  Similarity=0.512  Sum_probs=37.2

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEE-eCCceeEeeCCCeeecCCC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGE-LRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~-~~G~~G~fPsnyV~~i~~~  319 (336)
                      |+|++||+|.|+++.+++||.|+ .+|++||||+|||+.+.+.
T Consensus        20 Lsf~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~~~   62 (65)
T 1b07_A           20 LPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEKYHHH   62 (65)
T ss_dssp             CCBCTTCEEEEEECSSSSEEEEECTTSCEEEEEGGGEEECC--
T ss_pred             cCCcCCCEEEEEEecCCCeEEEEECCCCEEEEChHHEeecCCC
Confidence            55999999999999999999998 7999999999999987653

>3reb_B Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain binding, signaling, HCK SH3 domain, PR binding; 3.45A {Homo sapiens}

Probab=99.27  E-value=5.9e-12  Score=96.48  Aligned_cols=57  Identities=32%  Similarity=0.567  Sum_probs=50.4

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe--eCceeeecccceeecCCC
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPCDET  229 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~--~g~~G~fP~~yve~~~~~  229 (336)
                      ..++|+|||.++.+++|+|.+||+|.|+.  . ++|||.|+.  +|+.||||++||+.+...
T Consensus         4 ~~~~Alydy~~~~~~eLs~~~Gd~i~v~~--~-~~~Ww~g~~~~~g~~G~~P~~yv~~~~~~   62 (90)
T 3reb_B            4 IIVVALYDYVSWSPDDLSFQKGDQMVVLE--E-SGEWWKARSLATRKEGYIPSNYVARVDSG   62 (90)
T ss_dssp             CEEEESSCBCCSSTTBCCBCTTCEEEEEE--C-SSSEEEEEETTTCCEEEEEGGGEEEECC-
T ss_pred             EEEEECCccCcCCcCcCCCCCCCEEEEEE--e-CCCEEEEEECCCCCEEEEehhheEECCCC
Confidence            46899999999999999999999999963  3 478999997  799999999999998743

>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane, nuclear protein, phosphorylation, polymorphism, transport, structural genomics; NMR {Homo sapiens}

Probab=99.27  E-value=7.8e-12  Score=91.12  Aligned_cols=57  Identities=21%  Similarity=0.380  Sum_probs=46.9

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCC--ceeEeeCCCeeecCCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRG--QTGWFPESYVEPCDETG  320 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G--~~G~fPsnyV~~i~~~~  320 (336)
                      .++.+++.+...++                 |+|++||+|.|+++.+++||.|+.++  +.||||+|||+.+...+
T Consensus        10 ~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~~~~   68 (70)
T 2ecz_A           10 AIAKFNFNGDTQVE-----------------MSFRKGERITLLRQVDENWYEGRIPGTSRQGIFPITYVDVISGPS   68 (70)
T ss_dssp             EEESSCCCCCSTTB-----------------CCCCTTCBCEEEEEEETTEEEEEETTTTEEEEECTTTEEESSSCC
T ss_pred             EEECccCCCCCcCC-----------------cCCCCCCEEEEEEecCCCeEEEEECCCCCEEEEchHHEEECCCCC
Confidence            45666776665555                 55999999999999889999999876  99999999999997543

>2gqi_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.27  E-value=4.6e-12  Score=92.72  Aligned_cols=41  Identities=22%  Similarity=0.287  Sum_probs=37.6

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEE--eCCceeEeeCCCeeecCC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGE--LRGQTGWFPESYVEPCDE  318 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~--~~G~~G~fPsnyV~~i~~  318 (336)
                      |+|++||+|.|+++.+++||.|+  .+|++|+||+|||+.+..
T Consensus        25 Lsf~~Gd~i~v~~~~~~~W~~g~~~~~g~~G~~P~~yv~~~~~   67 (71)
T 2gqi_A           25 ISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEVSG   67 (71)
T ss_dssp             CCCCTTCBCCCCEECSSSCEEEECTTTCCEEEECTTSEEECCC
T ss_pred             CCCCCCCEEEEEEecCCCEEEEEECCCCCEEEeeHHHEEECCC
Confidence            55999999999999999999998  789999999999999864

>1uhc_A KIAA1010 protein; beta barrel, SH3, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.27  E-value=1.3e-11  Score=92.27  Aligned_cols=56  Identities=13%  Similarity=0.326  Sum_probs=46.7

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecC----CCeEEEEeCCceeEeeCCCeeecCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAE----PGWLAGELRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~----~~W~~g~~~G~~G~fPsnyV~~i~~~  319 (336)
                      ..|.+++.+...++                 |+|++||+|.|+++.+    ++||.++.+|++||||+|||+.++..
T Consensus        16 ~~Alydy~~~~~~e-----------------Ls~~~Gd~i~vl~~~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~   75 (79)
T 1uhc_A           16 YFAVYTFKARNPNE-----------------LSVSANQKLKILEFKDVTGNTEWWLAEVNGKKGYVPSNYIRKTESG   75 (79)
T ss_dssp             EEESSCBCCCSSSB-----------------CCBCTTCEEEEEESCCTTSCTTEEEEESSSCEEEEEGGGEEECCSS
T ss_pred             EEECccCCCCCCCc-----------------cCCCCCCEEEEEECCCCCCCCCeEEEEeCCCEEEEchHHeEECCCC
Confidence            45666776665555                 4599999999999986    89999999999999999999998754

>1uff_A Intersectin 2; beta barrel, SH3 domain, endocytosis, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.27  E-value=1.7e-11  Score=94.48  Aligned_cols=56  Identities=32%  Similarity=0.673  Sum_probs=46.4

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeec--CCCeEEEEeCCceeEeeCCCeeecCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNA--EPGWLAGELRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~--~~~W~~g~~~G~~G~fPsnyV~~i~~~  319 (336)
                      ..+.|+|.+...++                 |+|++||+|.|+++.  +++||.|+++|++||||+|||+.+...
T Consensus         8 ~~Alydy~a~~~~e-----------------Lsf~~Gd~i~v~~~~~~~~gWw~g~~~g~~G~~P~~yv~~~~~~   65 (93)
T 1uff_A            8 YRALYPFEARNHDE-----------------MSFNSGDIIQVDEKTVGEPGWLYGSFQGNFGWFPCNYVEKMPSS   65 (93)
T ss_dssp             EEESSCBCCCSSSC-----------------CCBCTTCEEEECSSCCCSSSEEEEEETTEEEEEETTTEEECCSS
T ss_pred             EEECccCCCCCCCC-----------------cCCCCCCEEEEeEccCCCCCEEEEEECCCEEEechHHeEEcCCc
Confidence            35566666665555                 459999999999986  789999999999999999999999754

>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A

Probab=99.27  E-value=6.1e-12  Score=94.15  Aligned_cols=42  Identities=24%  Similarity=0.525  Sum_probs=37.0

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEe--CCceeEeeCCCeeecCCC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPCDET  319 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~--~G~~G~fPsnyV~~i~~~  319 (336)
                      |+|++||+|.|+++.+++||.|+.  +|++|+||+|||+.++..
T Consensus        22 Ls~~~Gd~i~vl~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~~~   65 (79)
T 3cqt_A           22 LSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSIYLAPVDRL   65 (79)
T ss_dssp             CCBCTTCEEEEEECTTSSEEEEEETTTCCEEEEEGGGEEEC---
T ss_pred             CCCCCCCEEEEEEecCCCeEEEEECCCCCEEEeehHHeEECCcc
Confidence            559999999999999999999998  999999999999999754

>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae}

Probab=99.27  E-value=1.1e-11  Score=91.40  Aligned_cols=56  Identities=21%  Similarity=0.330  Sum_probs=46.1

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeC--CceeEeeCCCeeecCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELR--GQTGWFPESYVEPCDET  319 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~--G~~G~fPsnyV~~i~~~  319 (336)
                      ..+.+++.+...++                 |+|++||+|.|+++.+++||.|+..  |+.||||+|||+.+...
T Consensus         8 ~~Alydy~a~~~~e-----------------Ls~~~Gd~i~v~~~~~~gWw~g~~~~~g~~G~~P~~yv~~~~~~   65 (73)
T 2lcs_A            8 AVALYDFEPENDNE-----------------LRLAEGDIVFISYKHGQGWLVAENESGSKTGLVPEEFVSYIQPE   65 (73)
T ss_dssp             EEESSCBCCSSTTB-----------------CCBCTTCEEEEEEEETTTEEEEECTTSSCEEEEESTTEEECCSS
T ss_pred             EEECccCCCCCCCc-----------------cCCcCCCEEEEEEEcCCCEEEEEECCCCCEEEeeHHHEEECCCC
Confidence            45566666655554                 5599999999999999999999985  99999999999998654

>2jxb_A T-cell surface glycoprotein CD3 epsilon chain, cytoplasmic protein NCK2; T-cell receptor, SH3 domain, immunology, SH2 domain; NMR {Homo sapiens}

Probab=99.27  E-value=3.3e-12  Score=97.17  Aligned_cols=54  Identities=19%  Similarity=0.382  Sum_probs=48.2

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEE-eeCceeeecccceee
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE-LRGQTGWFPESYVEP  225 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~-~~g~~G~fP~~yve~  225 (336)
                      ...++|+|+|.++..+||+|++||+|.|+.  . ++|||.|+ .+|+.||||++||+.
T Consensus        31 ~~~~~alydy~~~~~~eLs~~~Gd~i~v~~--~-~~~Ww~g~~~~g~~G~~P~~yv~~   85 (86)
T 2jxb_A           31 EVIVIAKWDYTAQQDQELDIKKNERLWLLD--D-SKTWWRVRNAANRTGYVPSNYVER   85 (86)
T ss_dssp             CEEEEESSCCCCCSSSBCCCCTTEEEEEEE--C-CSSEEEEECTTSCEEEEEGGGBCC
T ss_pred             ceEEEECccCCCCCCCEeccCCCCEEEEEe--c-CCCeEEEEECCCCEEEeehHHEEe
Confidence            367999999999999999999999999964  3 67999999 489999999999974

>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} SCOP: b.34.2.1

Probab=99.27  E-value=7e-12  Score=92.10  Aligned_cols=44  Identities=20%  Similarity=0.478  Sum_probs=38.6

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCCCC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGE  321 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~~~  321 (336)
                      |+|++||+|.|+++.+++||.++.+|+.||||+|||+.+.....
T Consensus        22 Ls~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~~~   65 (73)
T 3thk_A           22 VTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLDPAQS   65 (73)
T ss_dssp             CCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEECCC---
T ss_pred             cCCCCCCEEEEEECCCCCeEEEEECCcEEEEehHHeEECCCCCC
Confidence            55999999999999999999999999999999999999976543

>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A

Probab=99.27  E-value=1.2e-11  Score=89.85  Aligned_cols=44  Identities=25%  Similarity=0.645  Sum_probs=39.4

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEeC--CceeEeeCCCeeecCCCCC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGELR--GQTGWFPESYVEPCDETGE  321 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~~--G~~G~fPsnyV~~i~~~~~  321 (336)
                      |+|++||+|.|+++.+++||.|+..  |+.||||+|||+.+++...
T Consensus        20 Ls~~~Gd~i~v~~~~~~~W~~g~~~~~g~~G~~P~~yv~~~~~~~~   65 (69)
T 1ruw_A           20 LPLKKGDIVFISRDEPSGWSLAKLLDGSKEGWVPTAYMTPYKDTRN   65 (69)
T ss_dssp             CCBCTTCEEEEEEECTTSEEEEEETTSSCEEEEEGGGEEECCSCSC
T ss_pred             ccCCCCCEEEEEEecCCCeEEEEECCCCCEEEEehHHeEEcCCccC
Confidence            5599999999999999999999987  9999999999999876433

>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A

Probab=99.27  E-value=5.6e-12  Score=88.10  Aligned_cols=39  Identities=26%  Similarity=0.547  Sum_probs=35.4

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEE-eCCceeEeeCCCeeec
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGE-LRGQTGWFPESYVEPC  316 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~-~~G~~G~fPsnyV~~i  316 (336)
                      |+|++||+|.|+++.+++||.|+ .+|+.|+||+|||+++
T Consensus        18 Ls~~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~   57 (57)
T 1cka_A           18 LPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEKY   57 (57)
T ss_dssp             CCBCTTCEEEEEECSSSSEEEEECTTSCEEEEEGGGEEC-
T ss_pred             CCCCCCCEEEEEEecCCCcEEEEeCCCCEEEEeHHHEEEC
Confidence            55999999999999999999998 7999999999999864

>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo sapiens}

Probab=99.27  E-value=3.5e-12  Score=92.75  Aligned_cols=55  Identities=16%  Similarity=0.210  Sum_probs=45.9

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeec---CCCeEEEEeCCceeEeeCCCeeecCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNA---EPGWLAGELRGQTGWFPESYVEPCDE  318 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~---~~~W~~g~~~G~~G~fPsnyV~~i~~  318 (336)
                      +.|.+++.+...++                 |+|++||+|.|+++.   +++||.|+.+|++||||+|||+.+..
T Consensus         6 ~~alydy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~   63 (69)
T 1wyx_A            6 AKALYDNVAESPDE-----------------LSFRKGDIMTVLEQDTQGLDGWWLCSLHGRQGIVPGNRLKILVG   63 (69)
T ss_dssp             EEESSCBCCSSTTB-----------------CCBCTTCEEEEEETTGGGCTTEEEEEETTEEEEEEGGGEEEEEE
T ss_pred             EEECccCCcCCCCc-----------------cCCcCCCEEEEeECCCCCCCCcEEEEECCcEEEechhhEEECCC
Confidence            45566666665555                 559999999999998   79999999999999999999998853

>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3, signaling protein; NMR {Gallus gallus}

Probab=99.27  E-value=2.3e-12  Score=95.88  Aligned_cols=64  Identities=17%  Similarity=0.471  Sum_probs=56.8

Q ss_pred             CCCCCCccccCCCEEEEEee-cCCceecccCCCcccccccc--------cceeeeeeeecccCCCCCCCCCCC
Q psy7077         128 STEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTARFRGVS--------EYRRYRAIYEFVSRNGDELSFQPG  191 (336)
Q Consensus       128 ~~~~~eLs~~~Gd~i~v~~~-~~~Ww~g~~~~~~g~~p~~~--------~~~~~~al~df~a~~~~eLs~~~G  191 (336)
                      ++.++||+|++||+|.|+++ +++||.|+.+|+.|+||.+.        ....++|+|||+++..+||+|.+.
T Consensus         2 a~~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~~~~~~~~alydy~a~~~dElsf~~~   74 (77)
T 2jmc_A            2 AMGPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLDSGTGKELVLALYDYQESGDNAPSYSPP   74 (77)
T ss_dssp             CSSSCCCCCCTTCEEECCCCCCSSCCCEEETTEEECCCGGGEEECCCSSCCCEEEESSCCCCSSCCCCCSCCC
T ss_pred             CcCCCccCCCCCCEEEEEEecCCCEEEEEECCcEEEEEeeEEEEcCCCCCCceEEECCCcCCCCCCccccCCC
Confidence            56789999999999999998 89999999999999999761        235788999999999999999864

>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel, beta sheet, zinc finger, metal binding protein; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A

Probab=99.26  E-value=1.2e-11  Score=90.42  Aligned_cols=57  Identities=21%  Similarity=0.344  Sum_probs=46.1

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEee--cCCCeEEEE-eCCceeEeeCCCeeecCCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQN--AEPGWLAGE-LRGQTGWFPESYVEPCDETG  320 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~--~~~~W~~g~-~~G~~G~fPsnyV~~i~~~~  320 (336)
                      ..+.+++.+...++                 |+|++||+|.|+++  .+++||.|+ .+|+.||||+|||+.++..+
T Consensus         9 ~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~~~~   68 (71)
T 1u5s_A            9 VQTLYPFSSVTEEE-----------------LNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVVLSDGP   68 (71)
T ss_dssp             EEESSCCCCCSSSB-----------------CCCCSSCCEEEEECCCTTTCEEEEEETTTEEEEEETTSEEECCCSC
T ss_pred             EEEcccCCCCCCCc-----------------ccCCCCCEEEEEECCCCCCCCEEEEeCCCCEEEEeHHHEEECCCCC
Confidence            45566666655544                 55999999999999  688899896 89999999999999997643

>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae}

Probab=99.26  E-value=1.2e-11  Score=90.33  Aligned_cols=56  Identities=18%  Similarity=0.356  Sum_probs=46.4

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeec-CCCeEEEEe--CCceeEeeCCCeeecCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNA-EPGWLAGEL--RGQTGWFPESYVEPCDET  319 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~-~~~W~~g~~--~G~~G~fPsnyV~~i~~~  319 (336)
                      ..+.+++.+...++                 |+|++||+|.|+++. +++||.|+.  +|+.||||+|||+.++..
T Consensus         9 ~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~~~   67 (71)
T 2jt4_A            9 GIVQYDFMAESQDE-----------------LTIKSGDKVYILDDKKSKDWWMCQLVDSGKSGLVPAQFIEPVRDK   67 (71)
T ss_dssp             EEECSCBCCSSTTB-----------------CCBCTTCEEEEEESSSCSSEEEEEETTTCCEEEEEGGGEEETTTS
T ss_pred             EEEcccCCCCCCCc-----------------ccCCCCCEEEEEECCCCCCCEEEEECCCCCeEEechHHeEECCCc
Confidence            45566666655555                 559999999999987 899999998  999999999999999754

>1awj_A ITK; transferase, regulatory intramolecular complex, kinase; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 2rn8_A 2rna_A 2k79_A 2k7a_A

Probab=99.26  E-value=5.5e-13  Score=99.30  Aligned_cols=55  Identities=20%  Similarity=0.396  Sum_probs=49.3

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe-eCceeeecccceee
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL-RGQTGWFPESYVEP  225 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~-~g~~G~fP~~yve~  225 (336)
                      ...++|+|+|.++..+||+|++||+|.|+  ...++|||.|+. +|+.||||++||+.
T Consensus        20 ~~~~~alydy~~~~~~eLs~~~Gd~i~v~--~~~~~~Ww~~~~~~g~~G~~P~~yv~~   75 (77)
T 1awj_A           20 ETLVIALYDYQTNDPQELALRCDEEYYLL--DSSEIHWWRVQDKNGHEGYAPSSYLVE   75 (77)
T ss_dssp             SSCCCCCCCBCCCCTTSCCBCSSSCCSCC--CTTSSSBCCCCCSSSCCCCCBSTTCCC
T ss_pred             ceEEEECccCCCCCcCCcCCCCCCEEEEE--EecCCCCEEEEECCCCEEEEehHHEEE
Confidence            35699999999999999999999999995  456789999995 89999999999975

>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens}

Probab=99.26  E-value=7.8e-12  Score=90.58  Aligned_cols=54  Identities=24%  Similarity=0.470  Sum_probs=45.6

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEE-eCCceeEeeCCCeeecC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGE-LRGQTGWFPESYVEPCD  317 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~-~~G~~G~fPsnyV~~i~  317 (336)
                      .++.+++.+...++                 |+|++||+|.|+++.+++||.|+ .+|+.||||+|||+.++
T Consensus        13 ~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~   67 (68)
T 1s1n_A           13 YIAVGDFTAQQVGD-----------------LTFKKGEILLVIEKKPDGWWIAKDAKGNEGLVPRTYLEPYS   67 (68)
T ss_dssp             EEECSCBCCSSSSC-----------------CCBCSSEEEEECSCCSSSEEEEECSSSCEEEEESTTEEECC
T ss_pred             EEEcccCCCCCCCc-----------------CCCCCCCEEEEEEcCCCCeEEEEECCCCEEEEehHHeEECc
Confidence            45667776665555                 55999999999999999999998 79999999999999885

>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1

Probab=99.26  E-value=1e-11  Score=89.73  Aligned_cols=40  Identities=18%  Similarity=0.356  Sum_probs=36.8

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEE-eCCceeEeeCCCeeecC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGE-LRGQTGWFPESYVEPCD  317 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~-~~G~~G~fPsnyV~~i~  317 (336)
                      |+|++||+|.|+++.+++||.|+ .+|+.||||+|||+.+.
T Consensus        19 Ls~~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~   59 (67)
T 1gl5_A           19 LRLERGQEYIILEKNDLHWWRARDKYGSEGYIPSNYVTGKK   59 (67)
T ss_dssp             CCBCTTCEEEEEECSSSSEEEEECSSSCEEEEETTSEESST
T ss_pred             ecCCcCCEEEEEEccCCCcEEEEECCCCEEEEEhHhEEEcC
Confidence            55999999999999999999998 69999999999999883

>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal transduction, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}

Probab=99.26  E-value=1.8e-11  Score=93.94  Aligned_cols=62  Identities=21%  Similarity=0.346  Sum_probs=48.9

Q ss_pred             cccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEee--cCCCeEEEE-eCCceeEeeCCCeeecCCCCCC
Q psy7077         246 ELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQN--AEPGWLAGE-LRGQTGWFPESYVEPCDETGEV  322 (336)
Q Consensus       246 ~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~--~~~~W~~g~-~~G~~G~fPsnyV~~i~~~~~~  322 (336)
                      ...+.++|.+...++                 |+|++||+|.|+++  .+++||.|+ .+|++||||+|||+.+......
T Consensus        19 ~~~alydy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~~~~~~   81 (91)
T 1wx6_A           19 VVQTLYPFSSVTEEE-----------------LNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVVLSDGPAL   81 (91)
T ss_dssp             EEEESSCCCCSSSSB-----------------CCCCTTCEEEEEECCSSCTTEEEEECTTCCEEEEEGGGEEEEEESSSC
T ss_pred             EEEEeecCCcCCCCc-----------------ccCCCCCEEEEEECCCCCCCcEEEEeCCCCEEEEchHHEEECCCcCCC
Confidence            345666776665555                 55999999999999  688999998 7999999999999999765444


Q ss_pred             CC
Q psy7077         323 VP  324 (336)
Q Consensus       323 ~~  324 (336)
                      .+
T Consensus        82 ~~   83 (91)
T 1wx6_A           82 HP   83 (91)
T ss_dssp             SC
T ss_pred             CC
Confidence            33

>1spk_A RSGI RUH-010, riken cDNA 1300006M19; structural genomics, SH3 domain, five-stranded barrel, mouse cDNA; NMR {Mus musculus} SCOP: b.34.2.1

Probab=99.26  E-value=9.4e-12  Score=91.24  Aligned_cols=42  Identities=31%  Similarity=0.616  Sum_probs=38.0

Q ss_pred             CCCCCCCEEEEEee-cCCCeEEEEeC--CceeEeeCCCeeecCCC
Q psy7077         278 PIMGLGTVVPVKQN-AEPGWLAGELR--GQTGWFPESYVEPCDET  319 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~-~~~~W~~g~~~--G~~G~fPsnyV~~i~~~  319 (336)
                      |+|++||+|.|+++ .+++||.|+.+  |++||||+|||+++...
T Consensus        25 Ls~~~Gd~i~v~~~~~~~gWw~g~~~~~g~~G~fP~~yv~~~~~~   69 (72)
T 1spk_A           25 LSFAQGDVLTLLIPEEKDGWLYGEHDTTKARGWFPSSYTKLLSGP   69 (72)
T ss_dssp             CCBCTTCEEEECCSSCBTTEEEEEETTTCCEEEEEGGGCEECSSC
T ss_pred             CcCCCCCEEEEeEccCCCCcEEEEECCCCCEEEEehHHeEECCCC
Confidence            55999999999987 78999999987  99999999999998753

>2kbt_A Chimera of proto-oncogene VAV, linker, immunoglobulin G-binding protein G; sortase, protein ligation, intein, inset, solubility enhancement; NMR {Mus musculus}

Probab=99.26  E-value=9e-12  Score=103.67  Aligned_cols=59  Identities=41%  Similarity=0.835  Sum_probs=52.4

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|||.++..+||+|++||+|.|+.. ..++|||.|+.+|+.||||++||+.+..
T Consensus         5 ~~~~~Alydy~a~~~~ELsf~~Gd~i~Vl~~-~~~~gWw~g~~~g~~G~fP~~yv~~~~~   63 (142)
T 2kbt_A            5 FGTAKARYDFCARDRSELSLKEGDIIKILNK-KGQQGWWRGEIYGRIGWFPSNYVEEDYS   63 (142)
T ss_dssp             CCEEEESSCCCCSSSSBCCCCTTCEEEEEEC-CCSSSEEEEEETTEEEEEETTSEEESSC
T ss_pred             CeEEEECCccCCCCCCcCCCCCCCEEEEEEe-cCCCCeEEEEECCeeEEechHHEEEccc
Confidence            4679999999999999999999999999632 2478999999999999999999999864

>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C* 4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 3ua7_A 3ua6_A 1fyn_A 1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C* 1qwe_A ...

Probab=99.26  E-value=9e-12  Score=94.33  Aligned_cols=71  Identities=24%  Similarity=0.347  Sum_probs=46.4

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEe--CCceeEeeCCCeeecCCC-CCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPCDET-GEVV  323 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~--~G~~G~fPsnyV~~i~~~-~~~~  323 (336)
                      ..+.+++.+...++                 |+|++||+|.|+++.+++||.|+.  +|++|+||+|||+.+++. +...
T Consensus         9 ~~Alydy~a~~~~e-----------------Lsf~~Gd~i~vl~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~~~~~e~~   71 (84)
T 4ag1_C            9 FVALYDYNATRWTD-----------------LSFHKGEKFQILEFGPGDWWEARSLTTGETGYIPSNYVAPVDSIQGEQK   71 (84)
T ss_dssp             EEESSCBCCSBTTB-----------------CCBCTTCEEEEEECCSSSEEEEEETTTCCEEEEEGGGEEETTTCC----
T ss_pred             EEEcccCCCCCCCc-----------------ccccCCCEEEEEEecCCCeEEEEECCCCCEEEEehHHeEECCCcccccC
Confidence            35556666655554                 559999999999999999999998  999999999999998754 3333


Q ss_pred             CCCCCCCCCCC
Q psy7077         324 PGTELPGDKHH  334 (336)
Q Consensus       324 ~~~~~~~~~~~  334 (336)
                      .+.+++...||
T Consensus        72 ~~~~~~~~~~~   82 (84)
T 4ag1_C           72 LISEEDLHHHH   82 (84)
T ss_dssp             -----------
T ss_pred             CCcccChhhhc
Confidence            34444444443

>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} SCOP: b.34.2.1 PDB: 3h0i_A 3h0f_A*

Probab=99.26  E-value=1.1e-11  Score=90.98  Aligned_cols=54  Identities=22%  Similarity=0.434  Sum_probs=45.1

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEe--CCceeEeeCCCeeecC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPCD  317 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~--~G~~G~fPsnyV~~i~  317 (336)
                      ..+.+++.+...++                 |+|++||+|.|+++.+++||.|+.  +|+.||||+|||+.++
T Consensus        18 ~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~   73 (73)
T 3h0h_A           18 FVALYDYEAITEDD-----------------LSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYVAPVD   73 (73)
T ss_dssp             EEESSCBCCSSTTB-----------------CCBCTTCEEEEEECSSSSEEEEEETTTCCEEEEEGGGEEECC
T ss_pred             EEECccCCCCCCCc-----------------ceEeCCCEEEEEEecCCCeEEEEECCCCCEEEEEHHHeEECC
Confidence            45666666655554                 559999999999999999999998  8999999999999874

>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched library, clone:9530076O17...; SH3_1 domain; NMR {Mus musculus}

Probab=99.26  E-value=9.7e-12  Score=98.63  Aligned_cols=57  Identities=30%  Similarity=0.712  Sum_probs=51.7

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe--eCceeeecccceeecC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPCD  227 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~--~g~~G~fP~~yve~~~  227 (336)
                      ...++|+|+|.++.++||+|++||+|.|+  ...+++||.|+.  +|+.||||++||+.++
T Consensus        27 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~--~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~   85 (109)
T 2yt6_A           27 VTIFVALYDYEARTTEDLSFKKGERFQII--NNTEGDWWEARSIATGKSGYIPSNYVVPAD   85 (109)
T ss_dssp             CCEEEESSCCCCSSTTSCCCCTTCEEEEE--ECSCTTCEEEEESSSCCEEEECTTTEEESS
T ss_pred             CEEEEECccCCCCCCCccCCCCCCEEEEE--EccCCCcEEEEECCCCCEEEechHHcEECC
Confidence            46799999999999999999999999996  446789999996  8999999999999985

>1bb9_A Amphiphysin 2; transferase, SH3 domain; 2.20A {Rattus norvegicus} SCOP: b.34.2.1 PDB: 1muz_A 1mv0_B

Probab=99.25  E-value=5.2e-12  Score=101.32  Aligned_cols=58  Identities=28%  Similarity=0.570  Sum_probs=50.5

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeee---ecCCCCeEEEEe----------eCceeeecccceeec
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVK---QNAEPGWLAGEL----------RGQTGWFPESYVEPC  226 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~---~~~~~gW~~g~~----------~g~~G~fP~~yve~~  226 (336)
                      ..+++|+|+|.++..+||+|++||+|.|+..   ...++|||.|+.          +|+.||||++||+.+
T Consensus        44 ~~~~~Alydy~a~~~dELsf~~GDiI~Vl~~~~~~~~~~gWw~G~~~~t~~~~~~~~g~~G~fPsnyV~~l  114 (115)
T 1bb9_A           44 MFKVQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVFPENFTERV  114 (115)
T ss_dssp             CEEEEESSCBCCSSTTBCCBCTTCEEEEECCSCGGGCCTTEEEEEEHHHHHTTCCHHHHCEEEEGGGEEEE
T ss_pred             ceEEEECCccCCCCCCccCcCCCCEEEEeeccCCcccCCCeEEEEeCCCcccccccCCCEEEechHHEEEC
Confidence            4679999999999999999999999999641   157889999976          388999999999976

>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus}

Probab=99.25  E-value=1.1e-11  Score=90.18  Aligned_cols=42  Identities=36%  Similarity=0.616  Sum_probs=38.4

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEE--eCCceeEeeCCCeeecCCC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGE--LRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~--~~G~~G~fPsnyV~~i~~~  319 (336)
                      |+|++||+|.|+++.+++||.|+  .+|++||||+|||+.+...
T Consensus        24 Ls~~~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~~~   67 (70)
T 2cuc_A           24 LDLQKGEGIRVLGKYQDGWLKGLSLLTGRTGIFPSDYVIPVSGP   67 (70)
T ss_dssp             CCBCTTCEEEEEEEEETTEEEEEETTTCCEEEEEGGGCEECCCT
T ss_pred             CCCCCCCEEEEEEecCCCeEEEEECCCCCEEEEchHHeEECcCC
Confidence            55999999999999889999999  7999999999999998754

>3i5r_A Phosphatidylinositol 3-kinase regulatory subunit alpha; SH3 domain, peptide complex, alternative splicing, disease mutation, HOST-virus interaction, phosphoprotein, polymorphism; 1.70A {Homo sapiens} SCOP: b.34.2.1 PDB: 3i5s_A 1pht_A 1pnj_A 2pni_A 1pks_A 1pkt_A

Probab=99.25  E-value=1.7e-12  Score=97.99  Aligned_cols=60  Identities=33%  Similarity=0.654  Sum_probs=50.2

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeee-----------ec--CCCCeEEEEe--eCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVK-----------QN--AEPGWLAGEL--RGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~-----------~~--~~~gW~~g~~--~g~~G~fP~~yve~~~~  228 (336)
                      ..+++|+|+|.++.++||+|++||+|.|+..           +.  .++|||.|+.  +|+.|+||++||+.+..
T Consensus         5 ~~~~~Alydy~~~~~~eLs~~~Gd~I~V~~~~~~~~~~~~~~e~~~~~~gW~~g~~~~~g~~G~fP~~yV~~~~~   79 (83)
T 3i5r_A            5 GYQYRALYDYKKEREEDIDLHLGDILTVNKGSLVALGFSDGQEARPEEIGWLNGYNETTGERGDFPGTYVEYIGR   79 (83)
T ss_dssp             EEEEEECSCBCCCSTTBCCBCTTCEEEEEHHHHHHHTCTTTGGGCHHHHCEEEEEETTTTEEEEEEGGGEEEEEE
T ss_pred             CcEEEEccccCCCCCCccccCCCCEEEEeeccccccccccccccCCCCCccEEEEeCCCCCEEEEehHHEEECCc
Confidence            4689999999999999999999999999632           11  2448999965  69999999999998763

>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1

Probab=99.25  E-value=1e-11  Score=90.74  Aligned_cols=55  Identities=22%  Similarity=0.389  Sum_probs=44.5

Q ss_pred             cccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEe-ecCCCeEEEE-eCCceeEeeCCCeeecC
Q psy7077         246 ELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQ-NAEPGWLAGE-LRGQTGWFPESYVEPCD  317 (336)
Q Consensus       246 ~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~-~~~~~W~~g~-~~G~~G~fPsnyV~~i~  317 (336)
                      ...+.+++.+...++                 |+|++||+|.|++ ..+++||.|+ .+|+.||||+|||+..+
T Consensus        13 ~~~alydy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~   69 (71)
T 1csk_A           13 ECIAKYNFHGTAEQD-----------------LPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKRE   69 (71)
T ss_dssp             EEEESSCBCCSSTTB-----------------CCBCTTCEEEEEEECSSTTEEEEECTTSCEEEEETTSEEC--
T ss_pred             EEEEceeECcCCCCc-----------------CCCCCCCEEEEeECCCCCCCEEEEeCCCCEEEEehHHeEEcc
Confidence            356677777666555                 4599999999999 7888999998 79999999999999764

>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural genomics, structural genomics consortium, SGC, BE barrel; HET: EDT; 1.50A {Homo sapiens} SCOP: b.34.2.1

Probab=99.25  E-value=9.5e-12  Score=89.91  Aligned_cols=40  Identities=33%  Similarity=0.586  Sum_probs=35.4

Q ss_pred             CCCCCCCEEEEEee-cCCCeEEEE--eCCceeEeeCCCeeecC
Q psy7077         278 PIMGLGTVVPVKQN-AEPGWLAGE--LRGQTGWFPESYVEPCD  317 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~-~~~~W~~g~--~~G~~G~fPsnyV~~i~  317 (336)
                      |+|++||+|.|+++ .+++||.|+  .+|++||||+|||+.++
T Consensus        25 Lsf~~Gd~i~v~~~~~~~gW~~g~~~~~g~~G~fP~~yv~~l~   67 (67)
T 3rnj_A           25 LSFKEGDLITLLVPEARDGWHYGESEKTKMRGWFPFSYTRVLD   67 (67)
T ss_dssp             CCBCTTCEEEECSSSCBTTEEEEEETTTCCEEEEEGGGEEECC
T ss_pred             ccCCCCCEEEEeeccCCCCCEEEEECCCCCEEEEEHHHeEECc
Confidence            55999999999964 678999998  78999999999999873

>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A

Probab=99.25  E-value=1.4e-11  Score=87.38  Aligned_cols=40  Identities=25%  Similarity=0.638  Sum_probs=36.9

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEeCCcee-EeeCCCeeecC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGELRGQTG-WFPESYVEPCD  317 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G-~fPsnyV~~i~  317 (336)
                      |+|++||+|.|+++.+++||.|+.+|+.| |||+|||+.+.
T Consensus        20 Ls~~~Gd~i~v~~~~~~~W~~g~~~g~~gG~~P~~yv~~~~   60 (61)
T 1y0m_A           20 LTFTKSAIIQNVEKQDGGWWRGDYGGKKQLWFPSNYVEEMI   60 (61)
T ss_dssp             CCBCTTCEEEEEECCSSSEEEEEETTEEEEEEEGGGEEECC
T ss_pred             cCCcCCCEEEEEEecCCCEEEEEECCeEEEEEChHHcEECC
Confidence            55999999999999999999999999987 99999999874

>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens}

Probab=99.24  E-value=1.1e-11  Score=87.01  Aligned_cols=38  Identities=24%  Similarity=0.597  Sum_probs=35.7

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeee
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEP  315 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~  315 (336)
                      |+|++||+|.|+++.+++||.|+.+|+.||||+|||+.
T Consensus        20 Ls~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~   57 (58)
T 1zlm_A           20 LYFEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAE   57 (58)
T ss_dssp             CCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEE
T ss_pred             ccCCCCCEEEEEEeCCCCEEEEEECCCEEEEehHHEEe
Confidence            55999999999999999999999999999999999985

>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A

Probab=99.24  E-value=1.5e-11  Score=87.61  Aligned_cols=40  Identities=20%  Similarity=0.531  Sum_probs=35.9

Q ss_pred             CCCCCCCEEEEEee-cCCCeEEEEeCCceeEeeCCCeeecC
Q psy7077         278 PIMGLGTVVPVKQN-AEPGWLAGELRGQTGWFPESYVEPCD  317 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~-~~~~W~~g~~~G~~G~fPsnyV~~i~  317 (336)
                      |+|++||+|.|+++ .++|||.++.+|+.||||+|||+.++
T Consensus        22 Ls~~~Gd~i~v~~~~~~~~W~~~~~~g~~G~~P~~yv~~~~   62 (63)
T 3eg3_A           22 LSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSAYITPVN   62 (63)
T ss_dssp             CCBCTTCEEEEEEECTTSSEEEEEETTEEEEEEGGGEEESC
T ss_pred             cCCCCCCEEEEEEeCCCCCeEEEEECCCeEEEehHHeEECC
Confidence            55999999999995 46789999999999999999999875

>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3, signaling protein; NMR {Gallus gallus}

Probab=99.24  E-value=1.4e-11  Score=91.61  Aligned_cols=70  Identities=19%  Similarity=0.343  Sum_probs=56.3

Q ss_pred             cCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCCCCCCCCCCCCCCCCccccccccCCCCcCCCC
Q psy7077         180 SRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVPGTELPGDKHHLELIAEVPENISDSG  259 (336)
Q Consensus       180 a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~  259 (336)
                      ++..+||+|++||+|.|+  .+.+++||.|+.+|+.||||++||+.+.....            ....++.|+|.+...+
T Consensus         2 a~~~~eLs~~~Gd~i~v~--~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~~~------------~~~~~alydy~a~~~d   67 (77)
T 2jmc_A            2 AMGPREVTMKKGDILTLL--NSTNKDWWKVEVNDRQGFVPAAYVKKLDSGTG------------KELVLALYDYQESGDN   67 (77)
T ss_dssp             CSSSCCCCCCTTCEEECC--CCCCSSCCCEEETTEEECCCGGGEEECCCSSC------------CCEEEESSCCCCSSCC
T ss_pred             CcCCCccCCCCCCEEEEE--EecCCCEEEEEECCcEEEEEeeEEEEcCCCCC------------CceEEECCCcCCCCCC
Confidence            567899999999999996  44678999999999999999999999864211            2345677888888888


Q ss_pred             CCCc
Q psy7077         260 GSGI  263 (336)
Q Consensus       260 ~l~~  263 (336)
                      ++++
T Consensus        68 Elsf   71 (77)
T 2jmc_A           68 APSY   71 (77)
T ss_dssp             CCCS
T ss_pred             cccc
Confidence            8764

>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=2.2e-11  Score=88.64  Aligned_cols=57  Identities=26%  Similarity=0.399  Sum_probs=46.2

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeC--CceeEeeCCCeeecCCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELR--GQTGWFPESYVEPCDETG  320 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~--G~~G~fPsnyV~~i~~~~  320 (336)
                      ..+.+++.+...++                 |+|++||+|.|+++.+++||.|+..  |+.||||+|||+.+...+
T Consensus        10 ~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~gW~~g~~~~~g~~G~~P~~yv~~~~~~~   68 (70)
T 2ct3_A           10 YRAMYQYRPQNEDE-----------------LELREGDRVDVMQQCDDGWFVGVSRRTQKFGTFPGNYVAPVSGPS   68 (70)
T ss_dssp             EEESSCBCCSSTTB-----------------CCBCTTEEEEEEEECSSSCEEEEESSSCCEEEECTTTEEETTCSC
T ss_pred             EEECccCCcCCcCC-----------------ccCCCCCEEEEEEECCCCEEEEEECCCCCEEEechHHeEECCCCC
Confidence            45566666655554                 5599999999999999999999874  999999999999987543

>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1

Probab=99.24  E-value=1.1e-11  Score=88.19  Aligned_cols=53  Identities=21%  Similarity=0.377  Sum_probs=44.3

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeec
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPC  316 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i  316 (336)
                      ..+.+++.+...++                 |+|++||+|.|+++.+++||.|+.+|+.||||+|||++.
T Consensus         8 ~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~   60 (62)
T 1uj0_A            8 VRALYDFEAVEDNE-----------------LTFKHGELITVLDDSDANWWQGENHRGTGLFPSNFVTTD   60 (62)
T ss_dssp             EEESSCBCCCSTTB-----------------CCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEESC
T ss_pred             EEECccCCCCCcCC-----------------cCCCCCCEEEEEEeCCCCEEEEEECCCEEEechhHEEEe
Confidence            45566666655544                 559999999999999999999999999999999999853

>2kxc_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 1; IRTKS-SH3, espfu, complex structure, protein binding; NMR {Homo sapiens}

Probab=99.24  E-value=1.2e-11  Score=89.41  Aligned_cols=40  Identities=33%  Similarity=0.682  Sum_probs=36.6

Q ss_pred             CCCCCCCEEEEEee-cCCCeEEEEeC--CceeEeeCCCeeecC
Q psy7077         278 PIMGLGTVVPVKQN-AEPGWLAGELR--GQTGWFPESYVEPCD  317 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~-~~~~W~~g~~~--G~~G~fPsnyV~~i~  317 (336)
                      |+|++||+|.|+++ .+++||.|+.+  |++||||+|||+.++
T Consensus        24 Ls~~~Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~   66 (67)
T 2kxc_A           24 LSFAQGDVITLLIPEEKDGWLYGEHDVSKARGWFPSSYTKLLE   66 (67)
T ss_dssp             CCBCTTCEEEESSSSCBTTEEEEEESSSCCEEEEEGGGEEESC
T ss_pred             CcCCCCCEEEEeECCCCCCcEEEEECCCCCEEEEehHHeEECC
Confidence            55999999999996 78899999987  999999999999885

>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.23  E-value=1.2e-11  Score=89.96  Aligned_cols=56  Identities=20%  Similarity=0.335  Sum_probs=46.1

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCce-eEeeCCCeeecCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQT-GWFPESYVEPCDET  319 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~-G~fPsnyV~~i~~~  319 (336)
                      ..+.+++.+...++                 |+|++||+|.|+++.+++||.|+.+++. ||||+|||+.+.+.
T Consensus        10 ~~alydy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~Ww~g~~~~~~~G~~P~~yv~~~~~~   66 (69)
T 2eqi_A           10 VKALYDYKAKRSDE-----------------LTFCRGALIHNVSKEPGGWWKGDYGTRIQQYFPSNYVEDISGP   66 (69)
T ss_dssp             EEESSCBCCCSSSC-----------------CCBCTTCEEESCCCCSSSCEEEEETTEEEEEECGGGEEECCSC
T ss_pred             EEECeeECCCCcCc-----------------cCCCCCCEEEEEEcCCCCeEEEEECCCCEEEEchHHcEECccC
Confidence            45666776665555                 4599999999999999999999988777 99999999998653

>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae}

Probab=99.23  E-value=1.2e-11  Score=85.38  Aligned_cols=37  Identities=32%  Similarity=0.696  Sum_probs=34.2

Q ss_pred             CCCCCCCEEEEEeecC-CCeEEEEeCCceeEeeCCCee
Q psy7077         278 PIMGLGTVVPVKQNAE-PGWLAGELRGQTGWFPESYVE  314 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~-~~W~~g~~~G~~G~fPsnyV~  314 (336)
                      |+|++||+|.|+++.+ ++||.|+.+|++|+||+|||+
T Consensus        17 Ls~~~Gd~i~v~~~~~~~~W~~g~~~g~~G~~P~~yv~   54 (54)
T 2a28_A           17 ISIDPGDIITVIRGDDGSGWTYGECDGLKGLFPTSYCK   54 (54)
T ss_dssp             CCBCTTCEEEEEECCCSSSEEEEEETTEEEEEEGGGBC
T ss_pred             ccCCCCCEEEEEEecCCCCEEEEEECCeEEEeeHHHcC
Confidence            5599999999999985 799999999999999999985

>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A

Probab=99.23  E-value=9.2e-12  Score=89.22  Aligned_cols=40  Identities=23%  Similarity=0.544  Sum_probs=36.5

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEeC--------CceeEeeCCCeeecC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGELR--------GQTGWFPESYVEPCD  317 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~~--------G~~G~fPsnyV~~i~  317 (336)
                      |+|++||+|.|+++.+++||.|+..        |++||||+|||++++
T Consensus        18 Ls~~~Gd~i~v~~~~~~~Ww~g~~~~~~~g~~~g~~G~~P~~yv~~l~   65 (65)
T 2oaw_A           18 VTMKKGDILTLLNSTNKDWWKVEVKITVNGKTYERQGFVPAAYVKKLD   65 (65)
T ss_dssp             CCBCTTCEEEEEECCSSSEEEEEEEEEETTEEEEEEEEEEGGGEEECC
T ss_pred             CCCCCCCEEEEEEcCCCCEEEEEEccccCCCcCCcEEEEchHHeEEcC
Confidence            5599999999999999999999876        999999999999874

>2ke9_A Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosphoprotein, protein binding; NMR {Homo sapiens}

Probab=99.23  E-value=8.2e-12  Score=94.34  Aligned_cols=57  Identities=25%  Similarity=0.380  Sum_probs=45.8

Q ss_pred             ccccccCCC-CcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeC------CceeEeeCCCeeecC
Q psy7077         245 LELIAEVPE-NISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELR------GQTGWFPESYVEPCD  317 (336)
Q Consensus       245 ~~~~a~~~~-~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~------G~~G~fPsnyV~~i~  317 (336)
                      ..+.|.+++ .+.+.++                 |+|++||+|.|+++.+++||.|+++      |++||||+|||+.++
T Consensus        19 ~~~~Alydy~~a~~~~e-----------------Lsf~~GDiI~V~~~~~~gWw~G~~~~~~~~tg~~G~fPsnyV~~~~   81 (83)
T 2ke9_A           19 LKVRALKDFWNLHDPTA-----------------LNVRAGDVITVLEQHPDGRWKGHIHESQRGTDRIGYFPPGIVEVVS   81 (83)
T ss_dssp             EEEEESSCBCCCSCTTB-----------------CCBCTTCEEEESCSSCSSCEEEEECCSSTTSCCCEEECGGGEESSC
T ss_pred             eEEEEccccCCCCCCCc-----------------ccccCCCEEEEEEecCCCeEEEEECCCCCCCCCEEEechHHEEECC
Confidence            345566777 4554444                 5599999999999999999999975      799999999999885


Q ss_pred             C
Q psy7077         318 E  318 (336)
Q Consensus       318 ~  318 (336)
                      .
T Consensus        82 ~   82 (83)
T 2ke9_A           82 K   82 (83)
T ss_dssp             C
T ss_pred             C
Confidence            3

>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}

Probab=99.23  E-value=1.3e-11  Score=90.73  Aligned_cols=53  Identities=21%  Similarity=0.468  Sum_probs=44.7

Q ss_pred             cccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeee
Q psy7077         246 ELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEP  315 (336)
Q Consensus       246 ~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~  315 (336)
                      ...|.+++.+...++                 |+|++||+|.|+++.+++||.|+.+|++||||+|||+.
T Consensus        19 ~~~Alydy~a~~~~e-----------------Lsf~~Gd~i~Vl~~~~~gWw~g~~~g~~G~fP~~yV~~   71 (72)
T 2l0a_A           19 KVRAIYDFEAAEDNE-----------------LTFKAGEIITVLDDSDPNWWKGETHQGIGLFPSNFVTA   71 (72)
T ss_dssp             EEEESSCBCCSSTTB-----------------CCBCTTCEEEEEEEEETTEEEEECSSCEEECTTCCEEE
T ss_pred             EEEECCccCCCCCCc-----------------cCCCCCCEEEEEEecCCCEEEEEECCCEEEechhhCcc
Confidence            345667776665555                 45999999999999999999999999999999999984

>2kym_A BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI, STE20P PRR, CDC42P-interacting, S signaling protein; NMR {Lodderomyces elongisporus}

Probab=99.23  E-value=9.5e-12  Score=100.58  Aligned_cols=58  Identities=28%  Similarity=0.462  Sum_probs=51.2

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe---eCceeeecccceeecCCC
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL---RGQTGWFPESYVEPCDET  229 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~---~g~~G~fP~~yve~~~~~  229 (336)
                      ..++|+|+|.++.++||+|++||+|.|+.  ..++|||.|+.   +|+.||||++||+.++..
T Consensus         4 ~~~~Alydy~a~~~~ELsf~~Gd~i~vl~--~~~~~Ww~g~~~~~~g~~G~~P~nyv~~~~~~   64 (120)
T 2kym_A            4 LFAVTLYEFKAERDDELDVSPGENLSICA--HYDYEWFIAKPINRLGGPGLVPVSYVRIIDLM   64 (120)
T ss_dssp             CEEEECSCBCCCSTTCCCBCTTCEEEEEE--EETTTEEEEEESSSCSCCCCEEGGGEEEECSS
T ss_pred             EEEEEcccCCCCCCCccCCCCCCEEEEEE--ecCCCEEEEEECCCCCCEEEEchHHEEEccCC
Confidence            46899999999999999999999999964  46789999985   588899999999998643

>2rqr_A CED-12 homolog, engulfment and cell motility protein 1, linker, D of cytokinesis protein 2; KIAA0209, KIAA0281, apoptosis, membrane, phagocytosis; NMR {Homo sapiens}

Probab=99.23  E-value=9.7e-12  Score=100.39  Aligned_cols=56  Identities=30%  Similarity=0.544  Sum_probs=50.2

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe---eCceeeecccceeecC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL---RGQTGWFPESYVEPCD  227 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~---~g~~G~fP~~yve~~~  227 (336)
                      ...++|+|+|.++..+||+|++||+|.|+..  . +|||+|++   +|+.||||++||+.+.
T Consensus        59 ~~~~~Alydy~a~~~~eLsf~~Gd~i~vl~~--~-~gWw~g~~~~~~g~~G~fP~nyV~~~~  117 (119)
T 2rqr_A           59 ERHGVAIYNFQGSGAPQLSLQIGDVVRIQET--C-GDWYRGYLIKHKMLQGIFPKSFIHIKE  117 (119)
T ss_dssp             CEEEEBCSCBCCCSTTBCCBCTTCEEEEEEE--E-TTEEEEEESSCTTCEEEEEGGGBCCCC
T ss_pred             ceEEEEccccCCCCCCcccCcCCCEEEEEEc--C-CCEEEEEECCCCCCEEEeChhHEEEec
Confidence            4679999999999999999999999999753  3 59999998   8999999999998764

>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A

Probab=99.22  E-value=1.7e-11  Score=86.47  Aligned_cols=39  Identities=23%  Similarity=0.549  Sum_probs=35.5

Q ss_pred             CCCCCCCEEEEEee-cCCCeEEEEe--CCceeEeeCCCeeec
Q psy7077         278 PIMGLGTVVPVKQN-AEPGWLAGEL--RGQTGWFPESYVEPC  316 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~-~~~~W~~g~~--~G~~G~fPsnyV~~i  316 (336)
                      |+|++||+|.|+++ .+++||.|+.  +|+.||||+|||+++
T Consensus        19 Ls~~~Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~l   60 (60)
T 2v1q_A           19 LTIKSGDKVYILDDKKSKDWWMCQLVDSGKSGLVPAQFIEPV   60 (60)
T ss_dssp             CCBCTTCEEEEEESSSCSSEEEEEETTTCCEEEEEGGGEEEC
T ss_pred             ccCCCCCEEEEEeCCCCCCCEEEEECCCCCEEEEEHHHEEEC
Confidence            55999999999998 5889999998  999999999999875

>1nm7_A Peroxisomal membrane protein PAS20; yeast, PEX5P, PEX14P, PEX13P, import machine, SH3 domain, protein transport; NMR {Saccharomyces cerevisiae} SCOP: b.34.2.1

Probab=99.22  E-value=1.2e-11  Score=90.14  Aligned_cols=53  Identities=15%  Similarity=0.272  Sum_probs=43.0

Q ss_pred             ccccCCCCcCCCC-CCCccccCCCCCCCCCCCCCCCCCCEEEEEeecC-----CCeEEEEe-CCceeEeeCCCeeec
Q psy7077         247 LIAEVPENISDSG-GSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAE-----PGWLAGEL-RGQTGWFPESYVEPC  316 (336)
Q Consensus       247 ~~a~~~~~~~~~~-~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~-----~~W~~g~~-~G~~G~fPsnyV~~i  316 (336)
                      +.+.|++.+.+.+ +                 |+|++||+|.|+++.+     ++||.|+. +|++|+||+|||+++
T Consensus        10 ~~aly~y~a~~~~dE-----------------Lsf~~Gd~i~Vl~~~~~~~~~~gWW~g~~~~G~~G~~PsnyV~~l   69 (69)
T 1nm7_A           10 ARALYDFVPENPEME-----------------VALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEII   69 (69)
T ss_dssp             EEECSCCCCSSTTSC-----------------CCCCTTCEEEECCSSSSSCCSSSCEEEEETTTEEEEECGGGEEEC
T ss_pred             EEEEecccCCCCCCc-----------------cCCCCCCEEEEEecCCCCCCCCCeeEEEeCCCCEEEecHHHEEEC
Confidence            4456666666555 5                 4599999999999875     48888988 899999999999875

>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N protein 1; endocytosis, N-WAsp, dynamin, pacsin I, transferase; 2.64A {Mus musculus} PDB: 2x3x_D

Probab=99.22  E-value=1.1e-11  Score=87.53  Aligned_cols=53  Identities=25%  Similarity=0.416  Sum_probs=42.0

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecC-CCeEEEEeC-CceeEeeCCCeeec
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAE-PGWLAGELR-GQTGWFPESYVEPC  316 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~-~~W~~g~~~-G~~G~fPsnyV~~i  316 (336)
                      ..+.+++.+...++                 |+|++||+|.|+++.+ +|||.|+.+ |++|+||+|||+++
T Consensus         6 ~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~~W~~g~~~~g~~G~~P~~yv~~l   60 (60)
T 2x3w_D            6 VRALYDYDGQEQDE-----------------LSFKAGDELTKLGEEDEQGWCRGRLDSGQLGLYPANYVEAI   60 (60)
T ss_dssp             EEECSCBCCSSSSB-----------------CCBCTTCEEEECSCCCSSSEEEEECSSCCEEEEEGGGEEC-
T ss_pred             EEECcccCccCCCc-----------------ccCCCCCEEEEEEccCCCCceEEEeCCCCEEEecHHHEEEC
Confidence            45566666655444                 5599999999998854 599999988 99999999999864

>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A

Probab=99.22  E-value=1.9e-11  Score=88.35  Aligned_cols=56  Identities=23%  Similarity=0.412  Sum_probs=46.1

Q ss_pred             cccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCC--ceeEeeCCCeeecCC
Q psy7077         246 ELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRG--QTGWFPESYVEPCDE  318 (336)
Q Consensus       246 ~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G--~~G~fPsnyV~~i~~  318 (336)
                      .+.+.+++.+...++                 |+|++||+|.|+++.+++||.|+.++  ++|+||+|||+.+..
T Consensus         8 ~~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~~   65 (67)
T 2o9s_A            8 EAIAKFNFNGDTQVE-----------------MSFRKGERITLLRQVDENWYEGRIPGTSRQGIFPITYVDVIKR   65 (67)
T ss_dssp             EEEECSCBCCSSTTB-----------------CCBCTTCEEEEEEECSSSEEEEECTTSSCEEEEEGGGEEEEEC
T ss_pred             EEEECccCCcCCcCc-----------------cCCCCCCEEEEEEecCCCEEEEEECCCCCEEEEChHHeEECCC
Confidence            345666776665555                 45999999999999999999999876  999999999998853

>1gbq_A GRB2; complex (signal transduction/peptide), SH3 domain; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 1gbr_A 2gbq_A 3gbq_A 4gbq_A

Probab=99.22  E-value=9.7e-12  Score=91.76  Aligned_cols=56  Identities=23%  Similarity=0.470  Sum_probs=46.7

Q ss_pred             ccccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeec-CCCeEEEEeCCceeEeeCCCeeecC
Q psy7077         245 LELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNA-EPGWLAGELRGQTGWFPESYVEPCD  317 (336)
Q Consensus       245 ~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~-~~~W~~g~~~G~~G~fPsnyV~~i~  317 (336)
                      ..+++.+++.+...++                 |+|++||+|.|+++. +++||.|+.+|++|+||+|||+++.
T Consensus        10 ~~~~alydy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~   66 (74)
T 1gbq_A           10 MEAIAKYDFKATADDE-----------------LSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEMKP   66 (74)
T ss_dssp             CEEEESSCBCCSSTTB-----------------CCBCTTCEEECCBCSSCSSEEEEEETTEEEEEEGGGEEEEC
T ss_pred             eEEEECccCCCCCCCe-----------------eeEcCCCEEEEeEecCCCCEEEEEECCCEEEEehHhEEEcC
Confidence            3456677777766555                 459999999999988 6799999999999999999999875

>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1

Probab=99.22  E-value=1.3e-11  Score=86.46  Aligned_cols=38  Identities=21%  Similarity=0.451  Sum_probs=34.8

Q ss_pred             CCCCCCCEEEEEeecC-CCeEEEEe--CCceeEeeCCCeee
Q psy7077         278 PIMGLGTVVPVKQNAE-PGWLAGEL--RGQTGWFPESYVEP  315 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~-~~W~~g~~--~G~~G~fPsnyV~~  315 (336)
                      |+|++||+|.|+++.+ ++||.++.  +|++||||+|||++
T Consensus        18 Ls~~~Gd~i~v~~~~~~~~W~~g~~~~~g~~G~~P~~yv~~   58 (58)
T 1zuu_A           18 ITITPGDKISLVARDTGSGWTKINNDTTGETGLVPTTYIRI   58 (58)
T ss_dssp             CCBCTTCCEEEEECCSSSSEEEEEETTTTEEEEEEGGGEEC
T ss_pred             ccCCCCCEEEEeEcCCCCCCEEEEECCCCCEEEEEHHHEEC
Confidence            5599999999999986 79999998  99999999999974

>1tuc_A Alpha-spectrin; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton; 2.02A {Gallus gallus} SCOP: b.34.2.1

Probab=99.22  E-value=1.7e-11  Score=87.51  Aligned_cols=43  Identities=21%  Similarity=0.489  Sum_probs=39.8

Q ss_pred             CCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCC
Q psy7077         277 SPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       277 ~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~  319 (336)
                      +|+|++||+|.|+++.+++||.|+.+|+.||||+|||+.+.+.
T Consensus         5 eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~   47 (63)
T 1tuc_A            5 EVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLDSG   47 (63)
T ss_dssp             CCCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEECSCS
T ss_pred             ccCCCCCCEEEEEEecCCCEEEEEECCcEEEEeHHHEEEcCCC
Confidence            4779999999999999999999999999999999999998654

>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A

Probab=99.22  E-value=2.1e-11  Score=86.68  Aligned_cols=52  Identities=21%  Similarity=0.367  Sum_probs=41.6

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEE--eCCceeEeeCCCeeec
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGE--LRGQTGWFPESYVEPC  316 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~--~~G~~G~fPsnyV~~i  316 (336)
                      ..+.+++.+...++                 |+|++||+|.|+++.+ +||.|+  .+|+.|+||+|||+.+
T Consensus         9 ~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~-~Ww~g~~~~~g~~G~~P~~yv~~~   62 (62)
T 2iim_A            9 VIALHSYEPSHDGD-----------------LGFEKGEQLRILEQSG-EWWKAQSLTTGQEGFIPFNFVAKA   62 (62)
T ss_dssp             EEESSCBCCCSTTB-----------------CCBCTTCEEEEEECCS-SEEEEEETTTCCEEEEEGGGEEEC
T ss_pred             EEEcccCCCCCCCC-----------------cCCCCCCEEEEEEcCC-CEEEEEECCCCCEEEEEHHHEEEC
Confidence            45666666665555                 5599999999999965 788887  6999999999999864

>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A

Probab=99.22  E-value=1.9e-11  Score=87.23  Aligned_cols=40  Identities=28%  Similarity=0.567  Sum_probs=36.6

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEe--CCceeEeeCCCeeecC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPCD  317 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~--~G~~G~fPsnyV~~i~  317 (336)
                      |+|++||+|.|+++.+++||.|+.  +|+.|+||+|||+.++
T Consensus        23 Ls~~~Gd~i~v~~~~~~~W~~g~~~~~g~~G~~P~~yv~~~~   64 (64)
T 4f14_A           23 VSFRDGDYIVNVQPIDDGWMYGTVQRTGRTGMLPANYIEFVN   64 (64)
T ss_dssp             CCBCTTCEEEEEEECSSSEEEEEETTTTEEEEEEGGGEEEC-
T ss_pred             CCCCCCCEEEEEEeCCCCeEEEEECCCCCEEEEeHHHeEECc
Confidence            559999999999999999999998  8999999999999873

>1x6b_A RHO guanine exchange factor (GEF) 16; SH3 domain, neuroblastoma, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.21  E-value=2.9e-11  Score=90.30  Aligned_cols=55  Identities=31%  Similarity=0.507  Sum_probs=45.8

Q ss_pred             cccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEe--CCceeEeeCCCeeecCC
Q psy7077         246 ELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPCDE  318 (336)
Q Consensus       246 ~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~--~G~~G~fPsnyV~~i~~  318 (336)
                      ..++.++|.+...++                 |+|++||+|.|+++ +++||.|+.  +|++||||+|||+.+.+
T Consensus        19 ~~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~-~~gW~~g~~~~~g~~G~fP~~yv~~~~~   75 (79)
T 1x6b_A           19 QVEITKAFFAKQADE-----------------VTLQQADVVLVLQQ-EDGWLYGERLRDGETGWFPEDFARFISG   75 (79)
T ss_dssp             EEEESSCCCCCSSSB-----------------CCCCTTEEEEEEEE-ETTEEEEEETTTCCEEEECGGGCEEEES
T ss_pred             EEEECeeECCCCcCC-----------------cCCCCCCEEEEEEe-CCCEEEEEECCCCCEEEEchHHEEECCC
Confidence            345667776665555                 55999999999999 889999998  99999999999999864

>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain, signaling protein; NMR {Homo sapiens}

Probab=99.21  E-value=5.1e-11  Score=87.35  Aligned_cols=55  Identities=15%  Similarity=0.229  Sum_probs=43.3

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEE-eCCceeEeeCCCeeecCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGE-LRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~-~~G~~G~fPsnyV~~i~~~  319 (336)
                      ..+.+++.+...++                 |+|++||+|.|+++. ++||.|+ .+|+.||||+|||+.+...
T Consensus        10 ~~alydy~~~~~~e-----------------Ls~~~Gd~i~v~~~~-~~Ww~g~~~~g~~G~~P~~yv~~~~~~   65 (72)
T 2jw4_A           10 VVAKFDYVAQQEQE-----------------LDIKKNERLWLLDDS-KSWWRVRNSMNKTGFVPSNYVERKNSA   65 (72)
T ss_dssp             EECSSCCCCSSTTS-----------------CCCCTTCEEEEEECS-SSSEEEECTTSCEEEECTTSCEECCCC
T ss_pred             EEECcCCCcCCCCc-----------------ccCCCCCEEEEEECC-CCEEEEEECCCCEEEEEhhHEEEcCCC
Confidence            45666666665555                 559999999999984 5777787 4999999999999998754

>2enm_A Sorting nexin-9; SH3-like barrel, protein transport, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.21  E-value=3e-11  Score=89.73  Aligned_cols=44  Identities=30%  Similarity=0.618  Sum_probs=38.7

Q ss_pred             CCCCCCCEEEEEeec-CCCeEEEE-eCCceeEeeCCCeeecCCCCC
Q psy7077         278 PIMGLGTVVPVKQNA-EPGWLAGE-LRGQTGWFPESYVEPCDETGE  321 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~-~~~W~~g~-~~G~~G~fPsnyV~~i~~~~~  321 (336)
                      |+|++||+|.|+++. +++||.|+ .+|+.||||+|||+.+....+
T Consensus        27 Ls~~~Gd~i~v~~~~~~~gW~~g~~~~g~~G~~P~~yv~~~~~~~~   72 (77)
T 2enm_A           27 LTVTEGEIITVTNPNVGGGWLEGKNNKGEQGLVPTDYVEILPNDGK   72 (77)
T ss_dssp             CCCCTTCEEEEEESCCSSSEEEEECTTCCEEEEETTTEEEECCCCC
T ss_pred             ecCCCCCEEEEeEccCCCCeEEEEECCCCEEEeehHHeEECCCCCC
Confidence            559999999999985 78999998 899999999999999975433

>2rqv_A BUD emergence protein 1; BEM1P, SH3, CDC42P, cytoplasm, cytoskeleton, SH3 domain, SIG protein; NMR {Saccharomyces cerevisiae} PDB: 2rqw_A

Probab=99.21  E-value=8.8e-12  Score=98.78  Aligned_cols=59  Identities=14%  Similarity=0.138  Sum_probs=49.0

Q ss_pred             cccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCce---eEeeCCCeeecCCCCC
Q psy7077         246 ELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQT---GWFPESYVEPCDETGE  321 (336)
Q Consensus       246 ~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~---G~fPsnyV~~i~~~~~  321 (336)
                      .+++.|+|.+...++|                 +|++||+|.|+++.+++||.|+.+|+.   |+||+|||+.++..+.
T Consensus         7 ~~~Alydy~a~~~~EL-----------------sf~~Gd~i~vl~~~~~~Ww~g~~~g~~g~~G~fPsnYV~~~~~~~~   68 (108)
T 2rqv_A            7 YAIVLYDFKAEKADEL-----------------TTYVGENLFICAHHNCEWFIAKPIGRLGGPGLVPVGFVSIIDIATG   68 (108)
T ss_dssp             CEEESSCCCCCSSSBC-----------------CCCSSEEECCCCEETTTEEEECCSSSSCCCEEEESTTCBCCCSSSS
T ss_pred             EEEECCCcCCCCCCcC-----------------CcCCCCEEEEeEecCCCEEEEEECCccCCeeEeecceEEEecCCCC
Confidence            3567777877766654                 499999999999999999999998877   9999999999875443

>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A

Probab=99.21  E-value=2.3e-11  Score=85.18  Aligned_cols=38  Identities=29%  Similarity=0.761  Sum_probs=35.5

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEeC--CceeEeeCCCeee
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGELR--GQTGWFPESYVEP  315 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~~--G~~G~fPsnyV~~  315 (336)
                      |+|++||+|.|+++.+++||.|+..  |++||||+|||+.
T Consensus        18 Ls~~~Gd~i~v~~~~~~gW~~g~~~~~g~~G~~P~~yv~~   57 (58)
T 1zuy_A           18 LPLKKGDVIYITREEPSGWSLGKLLDGSKEGWVPTAYMKP   57 (58)
T ss_dssp             CCBCTTCEEEEEEECTTSEEEEEESSCSCEEEEEGGGEEC
T ss_pred             CCCCCCCEEEEEEecCCCeEEEEECCCCCEEEecHHHEEE
Confidence            5699999999999999999999987  9999999999985

>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens}

Probab=99.21  E-value=2.7e-11  Score=87.84  Aligned_cols=55  Identities=15%  Similarity=0.266  Sum_probs=45.1

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEE-eCCceeEeeCCCeeecCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGE-LRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~-~~G~~G~fPsnyV~~i~~~  319 (336)
                      ..+.+++.+...++                 |+|++||+|.|+++. ++||.++ .+|++||||+|||+.++..
T Consensus        10 ~~alydy~~~~~~e-----------------Ls~~~Gd~i~v~~~~-~~Ww~~~~~~g~~G~~P~~yv~~~~~~   65 (68)
T 1wxt_A           10 MQVLYEFEARNPRE-----------------LTVVQGEKLEVLDHS-KRWWLVKNEAGRSGYIPSNILEPLSGP   65 (68)
T ss_dssp             EEESSCBCCCSSSB-----------------CCBCTTCEEEEEECS-SSEEEEECTTSCEEEEEGGGEECCCCS
T ss_pred             EEECceECCCCcCc-----------------CCCCCCCEEEEEEcC-CCEEEEEECCCCEEEEEhHHcEECCCC
Confidence            45667776665555                 459999999999995 7788888 8999999999999998754

>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase, tyrosine-protein kinase LYK, kinase EMT, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.21  E-value=4e-11  Score=90.86  Aligned_cols=55  Identities=18%  Similarity=0.247  Sum_probs=45.4

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEE-eCCceeEeeCCCeeecCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGE-LRGQTGWFPESYVEPCDE  318 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~-~~G~~G~fPsnyV~~i~~  318 (336)
                      ..+.|++.+...++                 |+|++||+|.|+++.+++||.++ .+|++|+||+|||+.+..
T Consensus        22 ~~alydy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~Ww~~~~~~g~~G~~P~~yv~~~~~   77 (85)
T 2yuq_A           22 VIALYDYQTNDPQE-----------------LALRRNEEYCLLDSSEIHWWRVQDRNGHEGYVPSSYLVEKSP   77 (85)
T ss_dssp             EEESSCCCCSCSSB-----------------CCCCBTEEEEEEECCSSSEEEEECSSSCEEEEETTTCEECCC
T ss_pred             EEECcCCCCCCCCc-----------------CCCCCCCEEEEEEecCCCeEEEEECCCCEEEEehHHeEEccC
Confidence            45666776665555                 55999999999999998999996 699999999999999854

>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.21  E-value=4.4e-11  Score=88.45  Aligned_cols=41  Identities=22%  Similarity=0.511  Sum_probs=37.4

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEe----CCceeEeeCCCeeecCC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGEL----RGQTGWFPESYVEPCDE  318 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~----~G~~G~fPsnyV~~i~~  318 (336)
                      |+|++||+|.|+++.+++||.++.    +|++||||+|||+.++.
T Consensus        26 Ls~~~Gd~i~vl~~~~~gWw~g~~~~~~~g~~G~~P~~yv~~~~~   70 (75)
T 2egc_A           26 AGFQEGVSMEVLERNPNGWWYCQILDGVKPFKGWVPSNYLEKKNS   70 (75)
T ss_dssp             CCBCTTCEEEECEECTTSEEEEEECCSSSCEEEEEEGGGEEECCS
T ss_pred             CCCCCCCEEEEEEcCCCCeEEEEeCCCCCCcEEEEehHHCEECCC
Confidence            559999999999999999999988    57999999999999875

>1jqq_A PEX13P, peroxisomal membrane protein PAS20, PAS20P, roxin-13; compact beta-barrel of five anti-parrallel beta-strands; 2.65A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1n5z_A

Probab=99.20  E-value=3.8e-11  Score=92.30  Aligned_cols=59  Identities=15%  Similarity=0.268  Sum_probs=47.4

Q ss_pred             cccccCCCCcCCCC-CCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCC-----CeEEEEe-CCceeEeeCCCeeecCC
Q psy7077         246 ELIAEVPENISDSG-GSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEP-----GWLAGEL-RGQTGWFPESYVEPCDE  318 (336)
Q Consensus       246 ~~~a~~~~~~~~~~-~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~-----~W~~g~~-~G~~G~fPsnyV~~i~~  318 (336)
                      ...+.+++.+...+ +                 |+|++||+|.|+++.++     +||.|+. +|++||||+|||+.+..
T Consensus        16 ~~~alydy~~~~~~~e-----------------Lsf~~Gd~i~v~~~~~~~~~~~gWw~g~~~~g~~G~~P~~yv~~~~~   78 (92)
T 1jqq_A           16 FARALYDFVPENPEME-----------------VALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEIIKR   78 (92)
T ss_dssp             EEEESSBBCCSSTTTB-----------------CCBCTTCEEEEEEEECTTSCEEEEEEEEETTSCEEEEEGGGEEECCC
T ss_pred             EEEECccCCCCCCCCC-----------------cCCCCCCEEEEEECCCCCCCCCCCeEEEeCCCCEEEEehHHeEECCC
Confidence            35666777766555 5                 45999999999999876     8999998 89999999999999976


Q ss_pred             CCC
Q psy7077         319 TGE  321 (336)
Q Consensus       319 ~~~  321 (336)
                      ...
T Consensus        79 ~~~   81 (92)
T 1jqq_A           79 RKK   81 (92)
T ss_dssp             C--
T ss_pred             CCC
Confidence            543

>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens}

Probab=99.20  E-value=2.3e-11  Score=88.38  Aligned_cols=40  Identities=25%  Similarity=0.534  Sum_probs=36.7

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEe-CCceeEeeCCCeeecC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGEL-RGQTGWFPESYVEPCD  317 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~-~G~~G~fPsnyV~~i~  317 (336)
                      |+|++||+|.|+++.+++||.|+. +|+.|+||+|||+.+.
T Consensus        23 Ls~~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~   63 (69)
T 4esr_A           23 LTIHRGDIIRVFFKDNEDWWYGSIGKGQEGYFPANHVASET   63 (69)
T ss_dssp             CCBCTTCEEEEEEECSSSEEEEEEETTEEEEEEGGGEEEHH
T ss_pred             CCCCCCCEEEEEEecCCCeEEEEeCCCCEEEEchHHeEECc
Confidence            559999999999999999999988 9999999999999764

>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae}

Probab=99.20  E-value=2.1e-11  Score=85.62  Aligned_cols=40  Identities=28%  Similarity=0.494  Sum_probs=36.3

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEeC--CceeEeeCCCeeecC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGELR--GQTGWFPESYVEPCD  317 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~~--G~~G~fPsnyV~~i~  317 (336)
                      |+|++||+|.|+++.+++||.|+..  |+.|+||+|||+++.
T Consensus        18 Ls~~~Gd~i~v~~~~~~gW~~g~~~~~g~~G~~P~~yv~~~~   59 (59)
T 1yn8_A           18 LRLAEGDIVFISYKHGQGWLVAENESGSKTGLVPEEFVSYIQ   59 (59)
T ss_dssp             CCBCTTCEEEEEEEEETTEEEEECTTSSCEEEEEGGGEEECC
T ss_pred             cCCCCCCEEEEEEcCCCCeEEEEECCCCCEEEEehHHeEECC
Confidence            5599999999999999999999875  899999999999863

>1gcq_C VAV proto-oncogene; SH3 domain, protein-protein complex, GRB2,VAV, signaling protein/signaling protein complex; 1.68A {Mus musculus} SCOP: b.34.2.1 PDB: 1gcp_A

Probab=99.20  E-value=1.1e-11  Score=90.35  Aligned_cols=56  Identities=32%  Similarity=0.582  Sum_probs=43.8

Q ss_pred             eeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEE--eeCceeeecccceeecC
Q psy7077         171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE--LRGQTGWFPESYVEPCD  227 (336)
Q Consensus       171 ~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~--~~g~~G~fP~~yve~~~  227 (336)
                      .+.++++|.++..+||+|++||+|.|+.. ..+++||.|+  .+|+.||||++||+++.
T Consensus        12 ~y~~~~~~~~~~~~eLsf~~Gd~i~v~~~-~~~~~Ww~g~~~~~g~~G~fP~~yv~~~~   69 (70)
T 1gcq_C           12 EYYGIPPPPGAFGPFLRLNPGDIVELTKA-EAEHNWWEGRNTATNEVGWFPCNRVHPYV   69 (70)
T ss_dssp             CBSSSSCCGGGCSCBCCBCTTCEEEEEEC-CTTCSEEEEEETTTTEEEEEEGGGEEECC
T ss_pred             EEEecCCCCCCCCCcCCcCCCCEEEEEeC-CCCCCCeEEEeCCCCCEeEeehHHeEECC
Confidence            34455556666677999999999999632 2578999995  57999999999999764

>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked agammaglobulinemia, XLA, BTK, SH3 domain, transferase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A

Probab=99.19  E-value=9.5e-12  Score=89.89  Aligned_cols=55  Identities=16%  Similarity=0.321  Sum_probs=45.3

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEE-eCCceeEeeCCCeeecCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGE-LRGQTGWFPESYVEPCDE  318 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~-~~G~~G~fPsnyV~~i~~  318 (336)
                      ..+.+++.+...++                 |+|++||+|.|+++.+++||.++ .+|++||||+|||+.++.
T Consensus        11 ~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~~   66 (67)
T 1aww_A           11 VVALYDYMPMNAND-----------------LQLRKGDEYFILEESNLPWWRARDKNGQEGYIPSNYVTEAED   66 (67)
T ss_dssp             EEBSSCCCCSSSSS-----------------CCCCSSCEEECCCCCSSSEECCBCTTSCBCCEETTTBCCSCC
T ss_pred             EEECccCCCCCCCC-----------------ccCCCCCEEEEEEccCCCcEEEEECCCCEEEEchHhEEEcCC
Confidence            45666666655554                 55999999999999989999997 799999999999998764

>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein 10, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.19  E-value=5e-11  Score=86.80  Aligned_cols=56  Identities=21%  Similarity=0.326  Sum_probs=45.6

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeec-CCCeEEEEeC-CceeEeeCCCeeecCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNA-EPGWLAGELR-GQTGWFPESYVEPCDET  319 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~-~~~W~~g~~~-G~~G~fPsnyV~~i~~~  319 (336)
                      ..+.+++.+...++                 |+|++||+|.|+++. ++|||.++.+ |+.||||+|||+.+...
T Consensus        10 ~~alydy~~~~~~e-----------------Ls~~~Gd~i~vl~~~~~~gW~~~~~~~g~~G~~P~~yv~~~~~~   67 (70)
T 2ct4_A           10 CVAIYHFEGSSEGT-----------------ISMAEGEDLSLMEEDKGDGWTRVRRKEGGEGYVPTSYLRVTSGP   67 (70)
T ss_dssp             EEESSCBCCCSTTC-----------------CCBCTTCEEEEEECCSSSCEEEEECSSSCEEEEEGGGEEECCCC
T ss_pred             EEEcccCCCCCCCc-----------------CCCCCCCEEEEEeccCCCCeEEEEeCCCCEEEEEhHHeEEcCCC
Confidence            45666776665555                 459999999999986 4779999987 99999999999998754

>1k1z_A VAV; SH3, proto-oncogene, signaling protein; NMR {Mus musculus} SCOP: b.34.2.1

Probab=99.19  E-value=2.3e-11  Score=90.60  Aligned_cols=57  Identities=30%  Similarity=0.615  Sum_probs=44.7

Q ss_pred             eeeeeeeecccC---CCCCCCCCCCCEEEEeeeecCCCCeEEEEe--eCceeeecccceeecC
Q psy7077         170 RRYRAIYEFVSR---NGDELSFQPGDIIMVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPCD  227 (336)
Q Consensus       170 ~~~~al~df~a~---~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~--~g~~G~fP~~yve~~~  227 (336)
                      ..++++|+|.++   ..+||+|++||+|.|+.. ..++|||.|+.  +|+.||||+|||+++.
T Consensus        16 ~~~~a~~~~~~~~~~~~~eLsf~~Gd~i~v~~~-~~~~gWw~g~~~~~g~~G~fP~nyV~~~~   77 (78)
T 1k1z_A           16 EVFQEYYGIPPPPGAFGGFLRLNPGDIVELTKA-EAEHNWWEGRNTATNEVGWFPCNRVHPYV   77 (78)
T ss_dssp             EECSCBSSCSCCSSSSCCCCCBCTTCEEEEEEC-CSSCSCEEEEETTTTEEEEECSTTEEESC
T ss_pred             EEEEECCCCCCCCCCCCCccCCCCCCEEEEEEc-CCCCCeEEEEECCCCCEEEEehHHeEECC
Confidence            345566666664   359999999999999632 13789999994  7999999999999764

>1mv3_A MYC box dependent interacting protein 1; tumor suppressor, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.17  E-value=2.1e-11  Score=107.65  Aligned_cols=58  Identities=28%  Similarity=0.570  Sum_probs=50.9

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeee---ecCCCCeEEEEe----------eCceeeecccceeec
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVK---QNAEPGWLAGEL----------RGQTGWFPESYVEPC  226 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~---~~~~~gW~~g~~----------~g~~G~fP~~yve~~  226 (336)
                      ...++|+|+|.++..+||+|++||+|.|+..   ...++|||.|+.          +|+.||||+|||+.+
T Consensus       142 ~~~~rALYdY~a~~~dELSf~~GDiI~Vl~~~~~~~~ddgWw~G~~~~t~~~~~d~~G~~G~FPsnYVe~l  212 (213)
T 1mv3_A          142 MFKVQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKKLEKCRGVFPENFTERV  212 (213)
T ss_dssp             CEEEEESSCBCCCSTTCCCBCSSCEEEECCCSCGGGSCTTEEEEEEHHHHHTGGGGGGTCEEEESTTEEEE
T ss_pred             ceEEEECCCcCCCCCCcCCcCCCCEEEEeecCCCCccCCCeeEEEeCCcccccccCCCCEEEecHHHeEEC
Confidence            4679999999999999999999999999641   157789999996          499999999999976

>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.17  E-value=1.2e-10  Score=87.48  Aligned_cols=55  Identities=18%  Similarity=0.311  Sum_probs=44.8

Q ss_pred             cccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCC-CeEEEEe--CCceeEeeCCCeeecC
Q psy7077         246 ELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEP-GWLAGEL--RGQTGWFPESYVEPCD  317 (336)
Q Consensus       246 ~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~-~W~~g~~--~G~~G~fPsnyV~~i~  317 (336)
                      ..+|.+++.+...++                 |+|++||+|.|+++.++ +||.++.  +|++||||+|||+...
T Consensus        19 ~~~Alydy~~~~~~e-----------------Lsf~~Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~   76 (81)
T 1x6g_A           19 QCITKCEHTRPKPGE-----------------LAFRKGDVVTILEACENKSWYRVKHHTSGQEGLLAAGALRERS   76 (81)
T ss_dssp             EEEESSCBSSCCTTC-----------------CCBCTTCEEEEEECCCSSSEEEEEETTTCCEEEEEGGGEEECC
T ss_pred             EEEECCCCCcCCCCC-----------------CCCCCCCEEEEEeccCCCCeEEEEeCCCCCEEEEehHHEEEcc
Confidence            356667776665555                 45999999999998776 9999985  7999999999999765

>2rf0_A Mitogen-activated protein kinase kinase kinase 10; MAP3K10, MLK2, SH3 domain, TKL kinase, MKN28, structural GEN structural genomics consortium, SGC; 2.00A {Homo sapiens}

Probab=99.17  E-value=3.5e-11  Score=92.06  Aligned_cols=53  Identities=28%  Similarity=0.518  Sum_probs=43.7

Q ss_pred             cccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeec-----CCCeEEEEe-CCceeEeeCCCeee
Q psy7077         246 ELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNA-----EPGWLAGEL-RGQTGWFPESYVEP  315 (336)
Q Consensus       246 ~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~-----~~~W~~g~~-~G~~G~fPsnyV~~  315 (336)
                      ...|.|++.+...++                 |+|++||+|.|+++.     +++||.|+. +|++||||+|||++
T Consensus        31 ~~~Alydy~a~~~~E-----------------Lsf~~GD~I~Vl~~~~~~~~~~gWw~g~~~~g~~G~fP~nyV~p   89 (89)
T 2rf0_A           31 VWTAVFDYEAAGDEE-----------------LTLRRGDRVQVLSQDCAVSGDEGWWTGQLPSGRVGVFPSNYVAP   89 (89)
T ss_dssp             EEEECSCBCCSSTTB-----------------CCBCTTCEEEEEECCHHHHSSTTEEEEECTTCCEEEEEGGGEEC
T ss_pred             EEEECCccCCCCCCc-----------------cccCCCCEEEEEeccCCcccCCCEEEEEECCCCEEEEcHHHCcC
Confidence            345667776665555                 459999999999995     889999998 99999999999974

>2oi3_A Tyrosine-protein kinase HCK; human HCK, SH3, SRC-type tyrosine kinase, transferase; NMR {Homo sapiens} PDB: 2oj2_A 4hck_A 5hck_A

Probab=99.17  E-value=1.2e-10  Score=88.20  Aligned_cols=55  Identities=16%  Similarity=0.273  Sum_probs=44.4

Q ss_pred             cccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEe--CCceeEeeCCCeeecCC
Q psy7077         246 ELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPCDE  318 (336)
Q Consensus       246 ~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~--~G~~G~fPsnyV~~i~~  318 (336)
                      ...+.+++.+...++                 |+|++||+|.|+++. ++||.|+.  +|+.||||+|||+.+++
T Consensus        27 ~~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~-~~Ww~g~~~~~g~~G~~P~~yv~~~~~   83 (86)
T 2oi3_A           27 IVVALYDYEAIHHED-----------------LSFQKGDQMVVLEES-GEWWKARSLATRKEGYIPSNYVARVDS   83 (86)
T ss_dssp             EEEESSCCCCSSSSC-----------------CCCCTTCEEEEEEES-SSEEEEEETTTCCEEEEEGGGEEEGGG
T ss_pred             EEEECccCCCCCCCc-----------------CcCCCCCEEEEEEcC-CCeEEEEECCCCCEEEEehHHcEEccc
Confidence            345566666655544                 559999999999999 58888988  99999999999999853

>2kgt_A Tyrosine-protein kinase 6; SH3 domain, SRC kinase, PTK6, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; NMR {Homo sapiens}

Probab=99.17  E-value=5.7e-11  Score=86.97  Aligned_cols=54  Identities=19%  Similarity=0.318  Sum_probs=44.4

Q ss_pred             cccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEe---CCce---eEeeCCCeeecC
Q psy7077         246 ELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGEL---RGQT---GWFPESYVEPCD  317 (336)
Q Consensus       246 ~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~---~G~~---G~fPsnyV~~i~  317 (336)
                      ...+.+++.+...++                 |+|++||+|.| ++.+++||.|+.   +|+.   ||||+|||+.++
T Consensus        12 ~~~alydy~~~~~~e-----------------Ls~~~Gd~i~v-~~~~~~Ww~g~~~~~~g~~~~~G~~P~~yv~~~~   71 (72)
T 2kgt_A           12 KYVGLWDFKSRTDEE-----------------LSFRAGDVFHV-ARKEEQWWWATLLDEAGGAVAQGYVPHNYLAERE   71 (72)
T ss_dssp             EEECCTTCBCSSTTS-----------------CBCCTTCCEEE-EEECSSCEEEEEECTTSCEEEEEEECTTTSEEEC
T ss_pred             EEEEcccCCCCCcCC-----------------cCCCCCCEEEE-eeCCCCEEEEEEcCCCCCEeCCcEEcHhHEEEcc
Confidence            345666776665555                 45999999999 988889999988   8999   999999999875

>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2js2_A

Probab=99.16  E-value=3.5e-11  Score=87.12  Aligned_cols=55  Identities=18%  Similarity=0.219  Sum_probs=41.5

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEE-eCCceeEeeCCCeeecCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGE-LRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~-~~G~~G~fPsnyV~~i~~~  319 (336)
                      ..|.+++.+...++                 |+|++||+|.|+++. ++||.++ .+|++|+||+|||+.+++.
T Consensus         7 ~~Alydy~a~~~~E-----------------Lsf~~Gd~i~vl~~~-~~Ww~~~~~~g~~G~~Psnyv~~~~~~   62 (67)
T 2b86_A            7 VIAKWDYTAQQDQE-----------------LDIKKNERLWLLDDS-KTWWRVRNAANRTGYVPSNYVERKLEH   62 (67)
T ss_dssp             EEESSCBCCSSTTS-----------------CCBCTTCEEEEEECS-SSSCEEECTTSCEEECCCCSEEEC---
T ss_pred             EEEeeeECCCCCCc-----------------cccCCCCEEEEEecC-CCeEEEEeCCCCEEEeChHHEeEcCCC
Confidence            35666776665555                 459999999999996 5666676 6899999999999988653

>1i07_A Epidermal growth factor receptor kinase substrate EPS8; hormone/growth factor; 1.80A {Mus musculus} SCOP: b.34.2.1 PDB: 1aoj_A 1i0c_A

Probab=99.16  E-value=2.9e-11  Score=85.34  Aligned_cols=40  Identities=13%  Similarity=0.307  Sum_probs=35.2

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEE-eCCceeEeeCCCeeecCC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGE-LRGQTGWFPESYVEPCDE  318 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~-~~G~~G~fPsnyV~~i~~  318 (336)
                      |+|++||+|.|+++ +++||.++ .+|+.||||+|||+.+.+
T Consensus        18 Ls~~~Gd~i~v~~~-~~~Ww~~~~~~g~~G~~P~~yv~~~~~   58 (60)
T 1i07_A           18 LSVMKDDVLEILDD-RRQWWKVRNASGDSGFVPNNILDIMRT   58 (60)
T ss_dssp             CCBCTTCEEEECGG-GCCEEEEECTTSCEEEEEGGGEEEECC
T ss_pred             ccCCCCCEEEEEEc-CCCeEEEEECCCCEEEEEHHHeEEccC
Confidence            55999999999999 77788786 689999999999998864

>1wxu_A Peroxisomal biogenesis factor 13; SH3 domain, PEX13, protein-protein interaction, structural genomics; NMR {Mus musculus}

Probab=99.16  E-value=8.4e-11  Score=90.58  Aligned_cols=60  Identities=23%  Similarity=0.336  Sum_probs=48.2

Q ss_pred             ccccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecC----CCeEEEEeCCc-eeEeeCCCeeecCCC
Q psy7077         245 LELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAE----PGWLAGELRGQ-TGWFPESYVEPCDET  319 (336)
Q Consensus       245 ~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~----~~W~~g~~~G~-~G~fPsnyV~~i~~~  319 (336)
                      ....+.|+|.+...++                 |+|++||+|.|+++.+    ++||.|+++|+ .||||+|||+++...
T Consensus        18 ~~~~alydy~a~~~~e-----------------Lsf~~Gd~i~v~~~~~~~~~~gWw~g~~~~~~~G~~P~~yv~~~~~~   80 (93)
T 1wxu_A           18 VVARAEYDFVAVSDEE-----------------ISFRAGDMLNLALKEQQPKVRGWLLASLDGQTTGLIPANYVKILGKR   80 (93)
T ss_dssp             BCEEESSCBCCSSSSB-----------------CCBCSSCBCEECCTTTSCSCSSCEEEESSSSSCEEECSTTEEECCCB
T ss_pred             EEEEECccCCCCCCCc-----------------cCcCCCCEEEEEECCCCCCCCCcEEEEeCCcCEEEEehHHEEEcCCc
Confidence            3456677777665555                 4599999999999987    58999999888 999999999999755


Q ss_pred             CC
Q psy7077         320 GE  321 (336)
Q Consensus       320 ~~  321 (336)
                      ..
T Consensus        81 ~~   82 (93)
T 1wxu_A           81 RG   82 (93)
T ss_dssp             CC
T ss_pred             cc
Confidence            33

>2v1r_A Peroxisomal membrane protein PAS20; protein transport, translocation, transmembrane, peptide COM structural genomics, peroxisome; 2.1A {Saccharomyces cerevisiae} SCOP: b.34.2.1

Probab=99.16  E-value=3.9e-11  Score=89.68  Aligned_cols=56  Identities=16%  Similarity=0.283  Sum_probs=45.3

Q ss_pred             cccccCCCCcCCCC-CCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCC-----CeEEEEe-CCceeEeeCCCeeecCC
Q psy7077         246 ELIAEVPENISDSG-GSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEP-----GWLAGEL-RGQTGWFPESYVEPCDE  318 (336)
Q Consensus       246 ~~~a~~~~~~~~~~-~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~-----~W~~g~~-~G~~G~fPsnyV~~i~~  318 (336)
                      .+.|.+++.+...+ +                 |+|++||+|.|+++.++     +||.|+. +|++||||+|||+.+..
T Consensus        16 ~~~alydy~~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~~   78 (80)
T 2v1r_A           16 FARALYDFVPENPEME-----------------VALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEIIKR   78 (80)
T ss_dssp             EEEESSCBCCSSTTTB-----------------CCBCTTCEEEEEEEECTTSCEEEEEEEECTTSCEEEEEGGGEEEC--
T ss_pred             EEEECccCCCCCCCCE-----------------ecCCCCCEEEEEECCCCCCCCCCcEEEEeCCCCeEEEEHHHeEEcCC
Confidence            35666777766555 5                 45999999999999876     8999998 89999999999999864

>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A

Probab=99.15  E-value=4.8e-11  Score=86.50  Aligned_cols=55  Identities=16%  Similarity=0.287  Sum_probs=43.2

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEE-eCCceeEeeCCCeeecCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGE-LRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~-~~G~~G~fPsnyV~~i~~~  319 (336)
                      ..+.+++.+...++                 |+|++||+|.|+++. ++||.++ .+|++||||+|||+.+...
T Consensus        11 ~~alydy~~~~~~e-----------------Ls~~~Gd~i~v~~~~-~~Ww~~~~~~g~~G~~P~~yv~~~~~~   66 (68)
T 2k2m_A           11 VLCNYDFQARNSSE-----------------LSVKQRDVLEVLDDS-RKWWKVRDPAGQEGYVPYNILTPYPAA   66 (68)
T ss_dssp             EEESSCBCCCSSSB-----------------CCBCTTCEEEEEECS-SSEEEEECTTSCCEEEEGGGEEECCSC
T ss_pred             EEECccCCCCCCCc-----------------ccCCCCCEEEEEEcC-CCeEEEEeCCCCEEEEEhhhEEEcCCC
Confidence            45666676665555                 459999999999997 6677775 5899999999999998653

>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.15  E-value=6.2e-11  Score=85.87  Aligned_cols=40  Identities=18%  Similarity=0.272  Sum_probs=34.8

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEE-eCCceeEeeCCCeeecCC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGE-LRGQTGWFPESYVEPCDE  318 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~-~~G~~G~fPsnyV~~i~~  318 (336)
                      |+|++||+|.|+++. ++||.++ .+|++||||+|||+.+..
T Consensus        24 Ls~~~Gd~i~v~~~~-~~Ww~~~~~~g~~G~~P~~yv~~~~~   64 (68)
T 1wxb_A           24 LSVLKDEVLEVLEDG-RQWWKLRSRSGQAGYVPCNILGEASG   64 (68)
T ss_dssp             CCBCTTCEEEEEECS-SSEEEEECTTSCEEEEETTTCCBCCC
T ss_pred             cCCCCCCEEEEEEcC-CCEEEEEECCCCEEEEEHHHeEECCC
Confidence            559999999999986 7777777 599999999999998864

>1tuc_A Alpha-spectrin; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton; 2.02A {Gallus gallus} SCOP: b.34.2.1

Probab=99.15  E-value=9.3e-11  Score=83.67  Aligned_cols=45  Identities=24%  Similarity=0.584  Sum_probs=40.2

Q ss_pred             CCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCC
Q psy7077         182 NGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       182 ~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~  228 (336)
                      +++||+|++||+|.|+  ...+++||.|+.+|+.||||++||+.+.+
T Consensus         2 ~~~eLs~~~Gd~i~v~--~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~   46 (63)
T 1tuc_A            2 GPREVTMKKGDILTLL--NSTNKDWWKVEVNDRQGFVPAAYVKKLDS   46 (63)
T ss_dssp             CCCCCCBCTTCEEEEE--ECCSSSEEEEEETTEEEEEEGGGEEECSC
T ss_pred             CccccCCCCCCEEEEE--EecCCCEEEEEECCcEEEEeHHHEEEcCC
Confidence            5789999999999996  44678999999999999999999999864

>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.15  E-value=1e-10  Score=86.76  Aligned_cols=55  Identities=18%  Similarity=0.340  Sum_probs=45.9

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeC---Cce------eEeeCCCeeecC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELR---GQT------GWFPESYVEPCD  317 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~---G~~------G~fPsnyV~~i~  317 (336)
                      ..|.+++.+...++                 |+|++||+|.|+++.+++||.|+..   |+.      ||||+|||+.+.
T Consensus        10 ~~alydy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~Ww~g~~~~~~g~~~~~~~~G~~P~~yv~~~~   72 (77)
T 2d8j_A           10 FVALFDYQARTAED-----------------LSFRAGDKLQVLDTSHEGWWLARHLEKKGTGLGQQLQGYIPSNYVAEDS   72 (77)
T ss_dssp             EEESSCBCCSSSSB-----------------CCBCTTCCEEEEECCSSSEEEEEECSSCCSSCCCCSEEEEETTTEEECC
T ss_pred             EEEccCCCCCCCCc-----------------cCCCCCCEEEEEECCCCCeEEEEECCCCCcCcccCCceEECHHHeeEcC
Confidence            45666776665554                 5599999999999999999999887   999      999999999986


Q ss_pred             C
Q psy7077         318 E  318 (336)
Q Consensus       318 ~  318 (336)
                      .
T Consensus        73 ~   73 (77)
T 2d8j_A           73 G   73 (77)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.14  E-value=1.5e-10  Score=86.42  Aligned_cols=55  Identities=22%  Similarity=0.319  Sum_probs=42.8

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEe--CCceeEeeCCCeeecCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPCDET  319 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~--~G~~G~fPsnyV~~i~~~  319 (336)
                      .+|.|++.+...++                 |+|++||+|.|++. +++||.++.  +|+.||||+|||+.+...
T Consensus        20 ~~Alydy~a~~~~e-----------------Ls~~~Gd~i~v~~~-~~~Ww~~~~~~~g~~G~~P~~yv~~~~~p   76 (79)
T 2cud_A           20 LAVLSDYPSPDISP-----------------PIFRRGEKLRVISD-EGGWWKAISLSTGRESYIPGICVARVSGP   76 (79)
T ss_dssp             EEESSCSSCTTTSC-----------------CSSCTTCEEEEEEE-ETTEEEEEETTTCCEEEEEGGGEEEECCC
T ss_pred             EEEccCCCCCCCCc-----------------CCCCCCCEEEEEec-CCCeEEEEECCCCCEEEeeHHHeEEccCC
Confidence            45666676665555                 55999999999995 567777875  599999999999988643

>2e5k_A Suppressor of T-cell receptor signaling 1; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=9.5e-11  Score=90.43  Aligned_cols=56  Identities=23%  Similarity=0.431  Sum_probs=45.9

Q ss_pred             cccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEee--cC--CCeEEEE--eCCceeEeeCCCeeecCC
Q psy7077         246 ELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQN--AE--PGWLAGE--LRGQTGWFPESYVEPCDE  318 (336)
Q Consensus       246 ~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~--~~--~~W~~g~--~~G~~G~fPsnyV~~i~~  318 (336)
                      ..++.+++.+...++                 |+|++||+|.|+++  .+  ++||.|+  .+|++|+||+|||+.+.+
T Consensus        18 ~~~Alydy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~~~~gWw~g~~~~~g~~G~fP~~yv~~~~~   79 (94)
T 2e5k_A           18 TLQVIYPYTPQNDDE-----------------LELVPGDFIFMSPMEQTSTSEGWIYGTSLTTGCSGLLPENYITKADE   79 (94)
T ss_dssp             EEEECSCBCCSSSSB-----------------CCBCTTCEEEECGGGCCSTTTTEEEEEESSSCCEEEEEGGGEEECCS
T ss_pred             EEEECCcCCCCCCCC-----------------cCCCCCCEEEEEECcCCCCCCCcEEEEECCCCCEEEechHHeEEccc
Confidence            345667777666555                 45999999999988  45  8999999  899999999999999864

>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A

Probab=99.13  E-value=1.3e-10  Score=82.58  Aligned_cols=61  Identities=16%  Similarity=0.291  Sum_probs=47.3

Q ss_pred             CceeeecccceeecCCCCCCCCCCCCCCCCccccccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeec
Q psy7077         213 GQTGWFPESYVEPCDETGEVVPGTELPGDKHHLELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNA  292 (336)
Q Consensus       213 g~~G~fP~~yve~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~  292 (336)
                      |+.||||++||+.+....            ......|.|++.+...+++                 +|++||+|.|+++.
T Consensus         2 g~~G~~P~~yv~~~~~~~------------~~~~~~alydy~a~~~~eL-----------------sf~~Gd~i~v~~~~   52 (62)
T 1g2b_A            2 DRQGFVPAAYVKKLDSGT------------GKELVLALYDYQEKSPREV-----------------TMKKGDILTLLNST   52 (62)
T ss_dssp             CEEEEEEGGGEEECCCCS------------SSCEEEECSCBCCSSTTBC-----------------CBCTTCEEEEEECC
T ss_pred             CCccccccceEeecCCCC------------CceEEEEeeeECCCCCCcc-----------------CCCCCCEEEEEEec
Confidence            689999999999875321            1233567777777666554                 49999999999999


Q ss_pred             CCCeEEEEeC
Q psy7077         293 EPGWLAGELR  302 (336)
Q Consensus       293 ~~~W~~g~~~  302 (336)
                      +++||.|++|
T Consensus        53 ~~~Ww~g~~n   62 (62)
T 1g2b_A           53 NKDWWKVEVN   62 (62)
T ss_dssp             SSSEEEEEEC
T ss_pred             CCCEEEEEeC
Confidence            9999999875

>1bb9_A Amphiphysin 2; transferase, SH3 domain; 2.20A {Rattus norvegicus} SCOP: b.34.2.1 PDB: 1muz_A 1mv0_B

Probab=99.12  E-value=4.9e-11  Score=95.64  Aligned_cols=54  Identities=28%  Similarity=0.447  Sum_probs=44.3

Q ss_pred             cccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEe-----ecCCCeEEEEe----------CCceeEeeC
Q psy7077         246 ELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQ-----NAEPGWLAGEL----------RGQTGWFPE  310 (336)
Q Consensus       246 ~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~-----~~~~~W~~g~~----------~G~~G~fPs  310 (336)
                      ...|.|++.+...++                 |+|++||+|.|++     +.+++||.|+.          +|++||||+
T Consensus        46 ~~~Alydy~a~~~dE-----------------Lsf~~GDiI~Vl~~~~~~~~~~gWw~G~~~~t~~~~~~~~g~~G~fPs  108 (115)
T 1bb9_A           46 KVQAQHDYTATDTDE-----------------LQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVFPE  108 (115)
T ss_dssp             EEEESSCBCCSSTTB-----------------CCBCTTCEEEEECCSCGGGCCTTEEEEEEHHHHHTTCCHHHHCEEEEG
T ss_pred             EEEECCccCCCCCCc-----------------cCcCCCCEEEEeeccCCcccCCCeEEEEeCCCcccccccCCCEEEech
Confidence            356667777666555                 4599999999999     78899999965          489999999


Q ss_pred             CCeeec
Q psy7077         311 SYVEPC  316 (336)
Q Consensus       311 nyV~~i  316 (336)
                      |||+.+
T Consensus       109 nyV~~l  114 (115)
T 1bb9_A          109 NFTERV  114 (115)
T ss_dssp             GGEEEE
T ss_pred             HHEEEC
Confidence            999976

>1hsq_A Phospholipase C-gamma (SH3 domain); phosphoric diester hydrolase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2hsp_A

Probab=99.12  E-value=1.8e-11  Score=89.48  Aligned_cols=42  Identities=26%  Similarity=0.603  Sum_probs=38.1

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEeCCcee-EeeCCCeeecCCC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGELRGQTG-WFPESYVEPCDET  319 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G-~fPsnyV~~i~~~  319 (336)
                      |+|++||+|.|+++.+++||.|+.+|+.| |||+|||+.+...
T Consensus        23 Ls~~~Gd~i~v~~~~~~~Ww~g~~~g~~gG~~P~~yv~~~~~~   65 (71)
T 1hsq_A           23 LTFIKSAIIQNVEKQEGGWWRGDYGGKKQLWFPSNYVEEMVNP   65 (71)
T ss_dssp             CCCCTTCCCBSCCCBTTTEECCBCSSSCSCCEETTTCCSCSCC
T ss_pred             cCCCCCCEEEEEEecCCCEEEEEECCeEEeEEChHHcEECCCc
Confidence            55999999999999999999999999987 9999999988653

>1i1j_A Melanoma derived growth regulatory protein; SH3 subdomain, hormone/growth factor complex; 1.39A {Homo sapiens} SCOP: b.34.2.1 PDB: 1k0x_A 1hjd_A

Probab=99.11  E-value=4.6e-11  Score=94.68  Aligned_cols=55  Identities=24%  Similarity=0.284  Sum_probs=44.2

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEee-cCCC--eEEEEeC--------CceeEeeCCCeee
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQN-AEPG--WLAGELR--------GQTGWFPESYVEP  315 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~-~~~~--W~~g~~~--------G~~G~fPsnyV~~  315 (336)
                      +.|.|+|.+.+.++                 |+|++||+|.|+++ .+++  ||.|+++        |++||||+|||+.
T Consensus        25 ~~Alydy~a~~~~E-----------------Lsf~~GDiI~Vl~k~~~~g~dWW~G~~~~~~~~~~~g~~G~fPsnYV~~   87 (108)
T 1i1j_A           25 AVALQDYMAPDCRF-----------------LTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVRE   87 (108)
T ss_dssp             EEESSCBCCSSTTB-----------------CCBCTTCEEEEEEEECGGGTTEEEEEEBCSSTTCBCSCCEEEEGGGEEE
T ss_pred             EEECCccCCCCCCc-----------------cccCCCCEEEEEEecCCCCCCEEEEEECCccccCCCCCEEEEchhHEEE
Confidence            45667777766555                 45999999999998 3444  9999987        9999999999998


Q ss_pred             cCC
Q psy7077         316 CDE  318 (336)
Q Consensus       316 i~~  318 (336)
                      +..
T Consensus        88 ~~~   90 (108)
T 1i1j_A           88 DQT   90 (108)
T ss_dssp             EEE
T ss_pred             ccc
Confidence            763

>3jv3_A Intersectin-1; SH3 domain, DH domain, guanine nucleotide exchange factor, autoinhibition, domain-swapped, cell junction, cell project endocytosis; 2.40A {Mus musculus} PDB: 3gf9_A

Probab=99.11  E-value=6.9e-11  Score=108.77  Aligned_cols=59  Identities=36%  Similarity=0.750  Sum_probs=53.3

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  229 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~~  229 (336)
                      ...++|+|||.++.++||+|.+||+|.|+  ...++|||.|+.+|+.||||++||+.+.+.
T Consensus         2 ~~~~~a~~~~~~~~~~el~~~~gd~i~v~--~~~~~~w~~~~~~g~~G~~P~~~v~~~~~~   60 (283)
T 3jv3_A            2 SCQVIGMYDYTAQNDDELAFSKGQIINVL--NKEDPDWWKGEVSGQVGLFPSNYVKLTTDM   60 (283)
T ss_dssp             CEEEEESSCBCCSSTTBCCBCTTCEEEEE--ECCSTTEEEEEETTEEEEEEGGGEEEGGGS
T ss_pred             CeEEEEccccCCCCCCcCCCCCCCEEEEE--ecCCCCEEEEEECCCCCcCCCccccccCcc
Confidence            35789999999999999999999999996  456789999999999999999999988753

>1gcq_C VAV proto-oncogene; SH3 domain, protein-protein complex, GRB2,VAV, signaling protein/signaling protein complex; 1.68A {Mus musculus} SCOP: b.34.2.1 PDB: 1gcp_A

Probab=99.11  E-value=6.6e-11  Score=86.11  Aligned_cols=41  Identities=29%  Similarity=0.607  Sum_probs=36.5

Q ss_pred             CCCCCCCCEEEEEee-cCCCeEEE--EeCCceeEeeCCCeeecC
Q psy7077         277 SPIMGLGTVVPVKQN-AEPGWLAG--ELRGQTGWFPESYVEPCD  317 (336)
Q Consensus       277 ~Lsf~~Gd~V~V~~~-~~~~W~~g--~~~G~~G~fPsnyV~~i~  317 (336)
                      +|+|++||+|.|+++ .+++||.|  ..+|++|+||+|||+.+.
T Consensus        26 eLsf~~Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~fP~~yv~~~~   69 (70)
T 1gcq_C           26 FLRLNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPCNRVHPYV   69 (70)
T ss_dssp             BCCBCTTCEEEEEECCTTCSEEEEEETTTTEEEEEEGGGEEECC
T ss_pred             cCCcCCCCEEEEEeCCCCCCCeEEEeCCCCCEeEeehHHeEECC
Confidence            477999999999999 68899999  568999999999999763

>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling protein; 2.01A {Caenorhabditis elegans}

Probab=99.10  E-value=7.3e-11  Score=101.35  Aligned_cols=55  Identities=20%  Similarity=0.483  Sum_probs=49.8

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEE-eeCceeeecccceee
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE-LRGQTGWFPESYVEP  225 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~-~~g~~G~fP~~yve~  225 (336)
                      ...++|+|||.++.++||+|++||+|.|+  .+.++|||.|+ .+|+.||||+|||+.
T Consensus       118 ~~~~~alydy~~~~~~eLsf~~Gd~i~v~--~~~~~~Ww~g~~~~g~~G~~P~nyv~~  173 (174)
T 3qwx_X          118 IEVVVGTFKFTGERETDLPFEQGERLEIL--SKTNQDWWEARNALGTTGLVPANYVQI  173 (174)
T ss_dssp             SEEEEESSCBCCSSTTBCCBCTTCEEEEE--ECCSSSEEEEECTTCCEEEEEGGGEEE
T ss_pred             ccEEEEecCcccCCCCccccccCCEEEEE--EccCCCeEEEEECCCCEEEEChHHEEe
Confidence            45789999999999999999999999995  45688999999 599999999999975

>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2, signal transduction, adapter molecule, signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A 2eyw_A

Probab=99.10  E-value=6.6e-11  Score=106.23  Aligned_cols=61  Identities=30%  Similarity=0.623  Sum_probs=54.0

Q ss_pred             cceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEE-eeCceeeecccceeecCCCC
Q psy7077         168 EYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE-LRGQTGWFPESYVEPCDETG  230 (336)
Q Consensus       168 ~~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~-~~g~~G~fP~~yve~~~~~~  230 (336)
                      ....++|+|||.++..+||+|++||+|.|+  .+.++|||.|+ .+|+.||||+|||+.+....
T Consensus       135 ~~~~~~al~dy~~~~~~eLsf~~Gd~i~v~--~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~~~~  196 (230)
T 2dvj_A          135 EAEYVRALFDFNGNDEEDLPFKKGDILRIR--DKPEEQWWNAEDSEGKRGMIPVPYVEKYRPAS  196 (230)
T ss_dssp             CCCCCBCCSCCCCSSSSSCCCCSSCBCCCC--BCSCSSEEEEECTTSCEEEEEGGGSCCCCSSC
T ss_pred             cceeEEEeeeecCCCCCCccCcCCCEEEEE--EccCCCcEEEEeCCCCEEEEehHHeEEcCCCC
Confidence            346799999999999999999999999995  45678999999 78999999999999987544

>1k1z_A VAV; SH3, proto-oncogene, signaling protein; NMR {Mus musculus} SCOP: b.34.2.1

Probab=99.09  E-value=2.9e-10  Score=84.56  Aligned_cols=41  Identities=27%  Similarity=0.592  Sum_probs=36.7

Q ss_pred             CCCCCCCCEEEEEeec-CCCeEEEE--eCCceeEeeCCCeeecC
Q psy7077         277 SPIMGLGTVVPVKQNA-EPGWLAGE--LRGQTGWFPESYVEPCD  317 (336)
Q Consensus       277 ~Lsf~~Gd~V~V~~~~-~~~W~~g~--~~G~~G~fPsnyV~~i~  317 (336)
                      +|+|++||+|.|+++. +++||.|+  .+|++||||+|||+.+.
T Consensus        34 eLsf~~Gd~i~v~~~~~~~gWw~g~~~~~g~~G~fP~nyV~~~~   77 (78)
T 1k1z_A           34 FLRLNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPCNRVHPYV   77 (78)
T ss_dssp             CCCBCTTCEEEEEECCSSCSCEEEEETTTTEEEEECSTTEEESC
T ss_pred             ccCCCCCCEEEEEEcCCCCCeEEEEECCCCCEEEEehHHeEECC
Confidence            4779999999999995 89999998  58999999999999763

>2kbt_A Chimera of proto-oncogene VAV, linker, immunoglobulin G-binding protein G; sortase, protein ligation, intein, inset, solubility enhancement; NMR {Mus musculus}

Probab=99.09  E-value=2.1e-10  Score=95.32  Aligned_cols=55  Identities=27%  Similarity=0.540  Sum_probs=45.9

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeec-CCCeEEEEeCCceeEeeCCCeeecCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNA-EPGWLAGELRGQTGWFPESYVEPCDE  318 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~-~~~W~~g~~~G~~G~fPsnyV~~i~~  318 (336)
                      +.+.+++.+...++                 |+|++||+|.|+++. +++||.|+.+|++||||+|||+.+..
T Consensus         8 ~~Alydy~a~~~~E-----------------Lsf~~Gd~i~Vl~~~~~~gWw~g~~~g~~G~fP~~yv~~~~~   63 (142)
T 2kbt_A            8 AKARYDFCARDRSE-----------------LSLKEGDIIKILNKKGQQGWWRGEIYGRIGWFPSNYVEEDYS   63 (142)
T ss_dssp             EEESSCCCCSSSSB-----------------CCCCTTCEEEEEECCCSSSEEEEEETTEEEEEETTSEEESSC
T ss_pred             EEECCccCCCCCCc-----------------CCCCCCCEEEEEEecCCCCeEEEEECCeeEEechHHEEEccc
Confidence            45666666665555                 459999999999984 88999999999999999999999864

>2vkn_A Protein SSU81; membrane, SH3 domain, transmembrane, membrane; 2.05A {Saccharomyces cerevisiae}

Probab=99.09  E-value=6.1e-11  Score=86.39  Aligned_cols=41  Identities=24%  Similarity=0.443  Sum_probs=35.4

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEE-eCCceeEeeCCCeeecCCC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGE-LRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~-~~G~~G~fPsnyV~~i~~~  319 (336)
                      |+|++||+|.|+++ +++||.|+ .+|+.||||+|||+.+...
T Consensus        24 Lsf~~Gd~i~v~~~-~~~Ww~g~~~~g~~G~~P~~yv~~~~~~   65 (70)
T 2vkn_A           24 ISFEQNEILQVSDI-EGRWWKARRANGETGIIPSNYVQLIDGP   65 (70)
T ss_dssp             CCBCTTCEEEEECT-TSSEEEEECTTSCEEEEEGGGEEEEEEE
T ss_pred             ccCCCCCEEEEEEc-CCCeEEEEECCCCEEEEehHHEEECCCC
Confidence            66999999999987 67777785 6999999999999998643

>2m0y_A Dedicator of cytokinesis protein 1; apoptosis; NMR {Mus musculus}

Probab=99.08  E-value=1.2e-10  Score=85.59  Aligned_cols=41  Identities=24%  Similarity=0.548  Sum_probs=35.7

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEe---CCceeEeeCCCeeecCCC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGEL---RGQTGWFPESYVEPCDET  319 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~---~G~~G~fPsnyV~~i~~~  319 (336)
                      |+|++||+|.|+++. ++||.|+.   +|+.|+||+|||++++..
T Consensus        28 Ls~~~Gd~i~v~~~~-~~W~~g~~~~~~g~~G~~P~~yv~~~~~~   71 (74)
T 2m0y_A           28 LSLQIGDTVHILETY-EGWYRGYTLRKKSKKGIFPASYIHLKEAI   71 (74)
T ss_dssp             CCEETTEEEEEEEBS-SSCEEEEESSCSSCCEEECGGGEEECCCC
T ss_pred             ccCCCCCEEEEEEcC-CCeEEEEECCCCCCEEEEehHHEEEeccc
Confidence            559999999999996 77888887   799999999999988643

>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched library, clone:9530076O17...; SH3_1 domain; NMR {Mus musculus}

Probab=99.08  E-value=4.2e-10  Score=89.06  Aligned_cols=55  Identities=22%  Similarity=0.439  Sum_probs=45.2

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEe--CCceeEeeCCCeeecCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPCDE  318 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~--~G~~G~fPsnyV~~i~~  318 (336)
                      ..+.+++.+...++                 |+|++||+|.|+++.+++||.|+.  +|+.||||+|||+.++.
T Consensus        30 ~~al~dy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~~   86 (109)
T 2yt6_A           30 FVALYDYEARTTED-----------------LSFKKGERFQIINNTEGDWWEARSIATGKSGYIPSNYVVPADS   86 (109)
T ss_dssp             EEESSCCCCSSTTS-----------------CCCCTTCEEEEEECSCTTCEEEEESSSCCEEEECTTTEEESSS
T ss_pred             EEECccCCCCCCCc-----------------cCCCCCCEEEEEEccCCCcEEEEECCCCCEEEechHHcEECCc
Confidence            45666666655544                 559999999999998899999985  99999999999999864

>2rqr_A CED-12 homolog, engulfment and cell motility protein 1, linker, D of cytokinesis protein 2; KIAA0209, KIAA0281, apoptosis, membrane, phagocytosis; NMR {Homo sapiens}

Probab=99.07  E-value=3.1e-10  Score=91.50  Aligned_cols=39  Identities=26%  Similarity=0.570  Sum_probs=35.5

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEe---CCceeEeeCCCeeecC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGEL---RGQTGWFPESYVEPCD  317 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~---~G~~G~fPsnyV~~i~  317 (336)
                      |+|++||+|.|++++ ++||.|++   +|+.||||+|||++++
T Consensus        76 Lsf~~Gd~i~vl~~~-~gWw~g~~~~~~g~~G~fP~nyV~~~~  117 (119)
T 2rqr_A           76 LSLQIGDVVRIQETC-GDWYRGYLIKHKMLQGIFPKSFIHIKE  117 (119)
T ss_dssp             CCBCTTCEEEEEEEE-TTEEEEEESSCTTCEEEEEGGGBCCCC
T ss_pred             ccCcCCCEEEEEEcC-CCEEEEEECCCCCCEEEeChhHEEEec
Confidence            569999999999986 68999998   8999999999999875

>1u3o_A Huntingtin-associated protein-interacting protein; SH3, CIS-proline,, signaling protein; NMR {Rattus norvegicus}

Probab=99.06  E-value=1.2e-10  Score=86.51  Aligned_cols=54  Identities=24%  Similarity=0.409  Sum_probs=46.8

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEee----Cceeeecccce
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR----GQTGWFPESYV  223 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~----g~~G~fP~~yv  223 (336)
                      ..++|+|||.++..+||+|++||++.|++....+++||.++..    +++|+||+|||
T Consensus        18 e~~valydF~Ar~~~ELS~~kGd~vevle~~~~~peW~lvr~~~~~~~qeGlVPsnyl   75 (82)
T 1u3o_A           18 ELTVVLQDFSAAHSSELSIQVGQTVELLERPSERPGWCLVRTTERSPPQEGLVPSSTL   75 (82)
T ss_dssp             EEEECSSCBCCCSTTCCCBCTTCEEEESSCTTSSTTEEEEEESSSSSCEEEEEEGGGS
T ss_pred             eEEEEEeeecCCCCCeeeEcCCCEEEEEecCCCCCCEEEEEECCCCCCcEeeccccEE
Confidence            4589999999999999999999999997654446899999962    37899999999

>3reb_B Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain binding, signaling, HCK SH3 domain, PR binding; 3.45A {Homo sapiens}

Probab=99.04  E-value=2.8e-10  Score=87.05  Aligned_cols=41  Identities=20%  Similarity=0.388  Sum_probs=35.6

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEe--CCceeEeeCCCeeecCCC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPCDET  319 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~--~G~~G~fPsnyV~~i~~~  319 (336)
                      |+|++||+|.|+++ +++||.|+.  +|+.|+||+|||+.+...
T Consensus        20 Ls~~~Gd~i~v~~~-~~~Ww~g~~~~~g~~G~~P~~yv~~~~~~   62 (90)
T 3reb_B           20 LSFQKGDQMVVLEE-SGEWWKARSLATRKEGYIPSNYVARVDSG   62 (90)
T ss_dssp             CCBCTTCEEEEEEC-SSSEEEEEETTTCCEEEEEGGGEEEECC-
T ss_pred             CCCCCCCEEEEEEe-CCCEEEEEECCCCCEEEEehhheEECCCC
Confidence            55999999999998 467888987  899999999999998754

>2kym_A BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI, STE20P PRR, CDC42P-interacting, S signaling protein; NMR {Lodderomyces elongisporus}

Probab=99.04  E-value=2.1e-10  Score=92.66  Aligned_cols=57  Identities=16%  Similarity=0.197  Sum_probs=46.5

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEe---CCceeEeeCCCeeecCCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGEL---RGQTGWFPESYVEPCDETG  320 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~---~G~~G~fPsnyV~~i~~~~  320 (336)
                      +.+.|++.+...++                 |+|++||+|.|+++.+++||.|+.   +|+.|+||+|||++++..+
T Consensus         6 ~~Alydy~a~~~~E-----------------Lsf~~Gd~i~vl~~~~~~Ww~g~~~~~~g~~G~~P~nyv~~~~~~~   65 (120)
T 2kym_A            6 AVTLYEFKAERDDE-----------------LDVSPGENLSICAHYDYEWFIAKPINRLGGPGLVPVSYVRIIDLMD   65 (120)
T ss_dssp             EEECSCBCCCSTTC-----------------CCBCTTCEEEEEEEETTTEEEEEESSSCSCCCCEEGGGEEEECSSC
T ss_pred             EEEcccCCCCCCCc-----------------cCCCCCCEEEEEEecCCCEEEEEECCCCCCEEEEchHHEEEccCCC
Confidence            45666776665555                 459999999999999999999974   6899999999999997543

>1mv3_A MYC box dependent interacting protein 1; tumor suppressor, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.03  E-value=3.7e-10  Score=99.74  Aligned_cols=39  Identities=33%  Similarity=0.562  Sum_probs=35.4

Q ss_pred             CCCCCCCEEEEEe-----ecCCCeEEEEe----------CCceeEeeCCCeeec
Q psy7077         278 PIMGLGTVVPVKQ-----NAEPGWLAGEL----------RGQTGWFPESYVEPC  316 (336)
Q Consensus       278 Lsf~~Gd~V~V~~-----~~~~~W~~g~~----------~G~~G~fPsnyV~~i  316 (336)
                      |+|++||+|.|++     +.++|||.|+.          +|++||||+|||+.+
T Consensus       159 LSf~~GDiI~Vl~~~~~~~~ddgWw~G~~~~t~~~~~d~~G~~G~FPsnYVe~l  212 (213)
T 1mv3_A          159 LQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKKLEKCRGVFPENFTERV  212 (213)
T ss_dssp             CCBCSSCEEEECCCSCGGGSCTTEEEEEEHHHHHTGGGGGGTCEEEESTTEEEE
T ss_pred             CCcCCCCEEEEeecCCCCccCCCeeEEEeCCcccccccCCCCEEEecHHHeEEC
Confidence            5599999999999     78899999985          599999999999976

>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3 domain, structural genomics center for structural genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A* 1x27_A*

Probab=99.03  E-value=2.9e-10  Score=97.69  Aligned_cols=56  Identities=18%  Similarity=0.415  Sum_probs=50.0

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe--eCceeeecccceeecC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPCD  227 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~--~g~~G~fP~~yve~~~  227 (336)
                      ...++|+|||.++.++||+|++||+|.|+.  . +++||.|+.  +|+.|+||++||+...
T Consensus        12 ~~~~~alydy~~~~~~eLs~~~Gd~i~v~~--~-~~~Ww~~~~~~~g~~G~vP~~yv~~~~   69 (175)
T 4d8k_A           12 DNLVIALHSYEPSHDGDLGFEKGEQLRILE--Q-SGEWWKAQSLTTGQEGFIPFNFVAKAN   69 (175)
T ss_dssp             -CEEEESSCBCCCSSSBCCBCTTCEEEEEE--C-CSSEEEEEETTTCCEEEEEGGGEEETT
T ss_pred             CcEEEEccCcCCcCCcccccccCCEEEEEc--c-CCCEEEEEECCCCceeeeccccccccc
Confidence            467999999999999999999999999964  3 579999998  7999999999999865

>2jxb_A T-cell surface glycoprotein CD3 epsilon chain, cytoplasmic protein NCK2; T-cell receptor, SH3 domain, immunology, SH2 domain; NMR {Homo sapiens}

Probab=99.02  E-value=2.3e-10  Score=86.81  Aligned_cols=37  Identities=19%  Similarity=0.322  Sum_probs=32.8

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEE-eCCceeEeeCCCeee
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGE-LRGQTGWFPESYVEP  315 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~-~~G~~G~fPsnyV~~  315 (336)
                      |+|++||+|.|+++ +++||.|+ .+|++||||+|||+.
T Consensus        48 Ls~~~Gd~i~v~~~-~~~Ww~g~~~~g~~G~~P~~yv~~   85 (86)
T 2jxb_A           48 LDIKKNERLWLLDD-SKTWWRVRNAANRTGYVPSNYVER   85 (86)
T ss_dssp             CCCCTTEEEEEEEC-CSSEEEEECTTSCEEEEEGGGBCC
T ss_pred             eccCCCCEEEEEec-CCCeEEEEECCCCEEEeehHHEEe
Confidence            56999999999998 66888888 589999999999974

>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A

Probab=99.00  E-value=3.6e-10  Score=80.28  Aligned_cols=53  Identities=19%  Similarity=0.414  Sum_probs=43.9

Q ss_pred             CCccccccc--------ccceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEee
Q psy7077         158 DRTARFRGV--------SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR  212 (336)
Q Consensus       158 ~~~g~~p~~--------~~~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~  212 (336)
                      |+.|+||.+        .....++|+|||.++.++||+|++||+|.|+  .+.+++||.|+++
T Consensus         2 g~~G~~P~~yv~~~~~~~~~~~~~alydy~a~~~~eLsf~~Gd~i~v~--~~~~~~Ww~g~~n   62 (62)
T 1g2b_A            2 DRQGFVPAAYVKKLDSGTGKELVLALYDYQEKSPREVTMKKGDILTLL--NSTNKDWWKVEVN   62 (62)
T ss_dssp             CEEEEEEGGGEEECCCCSSSCEEEECSCBCCSSTTBCCBCTTCEEEEE--ECCSSSEEEEEEC
T ss_pred             CCccccccceEeecCCCCCceEEEEeeeECCCCCCccCCCCCCEEEEE--EecCCCEEEEEeC
Confidence            467888875        2235789999999999999999999999996  4578899999864

>3o5z_A Phosphatidylinositol 3-kinase regulatory subunit; SRC homology 3 domain, protein binding; 2.01A {Homo sapiens} SCOP: b.34.2.0 PDB: 2kt1_A

Probab=99.00  E-value=2.4e-10  Score=87.51  Aligned_cols=56  Identities=27%  Similarity=0.337  Sum_probs=42.9

Q ss_pred             cccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEee-------------cCC--CeEEEEe--CCceeEe
Q psy7077         246 ELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQN-------------AEP--GWLAGEL--RGQTGWF  308 (336)
Q Consensus       246 ~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~-------------~~~--~W~~g~~--~G~~G~f  308 (336)
                      ...|.|++.+...++                 |+|++||+|.|+++             .++  +||.|+.  +|++|||
T Consensus        13 ~~~Alydy~a~~~~E-----------------Lsf~~GD~I~V~~~~~~~l~~~~~~~~~~~~~gW~~G~~~~~g~~G~f   75 (90)
T 3o5z_A           13 QYRALYPFRRERPED-----------------LELLPGDVLVVSRAALQALGVAEGGERCPQSVGWMPGLNERTRQRGDF   75 (90)
T ss_dssp             EEEECSCBCCCSTTB-----------------CCBCTTCEEEEEHHHHHHTTCCTTGGGCHHHHCEEEEEETTTCCEEEE
T ss_pred             EEEEeeeECCCCCCc-----------------cCCcCCCEEEEEeccccccccccccccCCCCCCceEEEeCCCCCEEEe
Confidence            345666776665555                 45999999999953             234  8999976  6999999


Q ss_pred             eCCCeeecCC
Q psy7077         309 PESYVEPCDE  318 (336)
Q Consensus       309 PsnyV~~i~~  318 (336)
                      |+|||+.+..
T Consensus        76 P~nyVe~i~~   85 (90)
T 3o5z_A           76 PGTYVEFLGP   85 (90)
T ss_dssp             EGGGEEEEEE
T ss_pred             ehHHEEEecc
Confidence            9999998864

>1awj_A ITK; transferase, regulatory intramolecular complex, kinase; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 2rn8_A 2rna_A 2k79_A 2k7a_A

Probab=99.00  E-value=9.1e-11  Score=87.14  Aligned_cols=39  Identities=18%  Similarity=0.270  Sum_probs=35.1

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEe-CCceeEeeCCCeeec
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGEL-RGQTGWFPESYVEPC  316 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~-~G~~G~fPsnyV~~i  316 (336)
                      |+|++||+|.|+++.+++||.|+. +|++||||+|||+..
T Consensus        37 Ls~~~Gd~i~v~~~~~~~Ww~~~~~~g~~G~~P~~yv~~~   76 (77)
T 1awj_A           37 LALRCDEEYYLLDSSEIHWWRVQDKNGHEGYAPSSYLVEK   76 (77)
T ss_dssp             CCBCSSSCCSCCCTTSSSBCCCCCSSSCCCCCBSTTCCCC
T ss_pred             cCCCCCCEEEEEEecCCCCEEEEECCCCEEEEehHHEEEc
Confidence            559999999999999888998984 999999999999863

>3a98_A DOCK2, dedicator of cytokinesis protein 2; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens}

Probab=98.99  E-value=4.1e-10  Score=97.64  Aligned_cols=59  Identities=31%  Similarity=0.531  Sum_probs=51.0

Q ss_pred             cceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe---eCceeeecccceeecCCC
Q psy7077         168 EYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL---RGQTGWFPESYVEPCDET  229 (336)
Q Consensus       168 ~~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~---~g~~G~fP~~yve~~~~~  229 (336)
                      ....++|+|+|.++.++||+|++||+|.|++.  .+ |||.|++   +|+.|+||++||+.....
T Consensus        16 ~~~~~~Alydf~~~~~~eLs~~~Gd~i~v~~~--~~-~W~~g~~~~~~g~~G~fP~nyV~~~~~~   77 (184)
T 3a98_A           16 KERHGVAIYNFQGSGAPQLSLQIGDVVRIQET--CG-DWYRGYLIKHKMLQGIFPKSFIHIKEVT   77 (184)
T ss_dssp             SCCEEEESSCBCCSSTTBCCBCTTCEEEEEEE--ET-TEEEEEETTEEEEEEEEEGGGEEEECC-
T ss_pred             CceEEEEeeeeCCCCCCCCCcCCCCEEEEEec--CC-CEEEEEEecCCCceEEECcceEEEeccc
Confidence            34679999999999999999999999999743  33 6999998   789999999999998643

>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D

Probab=98.97  E-value=6.2e-10  Score=109.71  Aligned_cols=59  Identities=29%  Similarity=0.582  Sum_probs=53.8

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  229 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~~  229 (336)
                      ...++|+|||.++.++||+|.+||+|.|+  ...++|||.|+.+|+.||||++||+.+.+.
T Consensus        30 ~~~~~al~~~~~~~~~eL~~~~gd~i~v~--~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~   88 (466)
T 2pz1_A           30 VVCAEALWDHVTMDDQELGFKAGDVIEVM--DATNREWWWGRVADGEGWFPASFVRLRVNQ   88 (466)
T ss_dssp             CEEEEESSCBCCCCTTBCCBCTTCEEEEE--ECCSSSEEEEEETTEEEEEEGGGEEECSCC
T ss_pred             ccEEEEccccCCCCCCcCCCCCCCEEEEE--EecCCCEEEEEECCcEEEEehhHeeeccCc
Confidence            46899999999999999999999999996  456889999999999999999999987654

>3i5r_A Phosphatidylinositol 3-kinase regulatory subunit alpha; SH3 domain, peptide complex, alternative splicing, disease mutation, HOST-virus interaction, phosphoprotein, polymorphism; 1.70A {Homo sapiens} SCOP: b.34.2.1 PDB: 3i5s_A 1pht_A 1pnj_A 2pni_A 1pks_A 1pkt_A

Probab=98.95  E-value=1.9e-10  Score=86.60  Aligned_cols=41  Identities=37%  Similarity=0.641  Sum_probs=34.0

Q ss_pred             CCCCCCCEEEEEee---------------cCCCeEEEEe--CCceeEeeCCCeeecCC
Q psy7077         278 PIMGLGTVVPVKQN---------------AEPGWLAGEL--RGQTGWFPESYVEPCDE  318 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~---------------~~~~W~~g~~--~G~~G~fPsnyV~~i~~  318 (336)
                      |+|++||+|.|+++               .+++||.|+.  +|++|+||+|||+.+..
T Consensus        22 Ls~~~Gd~I~V~~~~~~~~~~~~~~e~~~~~~gW~~g~~~~~g~~G~fP~~yV~~~~~   79 (83)
T 3i5r_A           22 IDLHLGDILTVNKGSLVALGFSDGQEARPEEIGWLNGYNETTGERGDFPGTYVEYIGR   79 (83)
T ss_dssp             CCBCTTCEEEEEHHHHHHHTCTTTGGGCHHHHCEEEEEETTTTEEEEEEGGGEEEEEE
T ss_pred             cccCCCCEEEEeeccccccccccccccCCCCCccEEEEeCCCCCEEEEehHHEEECCc
Confidence            55999999999965               3448999954  69999999999998854

>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2, signal transduction, adapter molecule, signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A 2eyw_A

Probab=98.91  E-value=7.6e-10  Score=99.27  Aligned_cols=46  Identities=22%  Similarity=0.462  Sum_probs=40.7

Q ss_pred             CCCCCCCCEEEEEeecCCCeEEEE-eCCceeEeeCCCeeecCCCCCC
Q psy7077         277 SPIMGLGTVVPVKQNAEPGWLAGE-LRGQTGWFPESYVEPCDETGEV  322 (336)
Q Consensus       277 ~Lsf~~Gd~V~V~~~~~~~W~~g~-~~G~~G~fPsnyV~~i~~~~~~  322 (336)
                      +|+|++||+|.|+++.+++||.|+ .+|++||||+|||+.++.....
T Consensus       152 eLsf~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~~~~~~  198 (230)
T 2dvj_A          152 DLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEKYRPASAS  198 (230)
T ss_dssp             SCCCCSSCBCCCCBCSCSSEEEEECTTSCEEEEEGGGSCCCCSSCCC
T ss_pred             CccCcCCCEEEEEEccCCCcEEEEeCCCCEEEEehHHeEEcCCCCcC
Confidence            366999999999999999999998 8999999999999999765433

>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling protein; 2.01A {Caenorhabditis elegans}

Probab=98.91  E-value=1.2e-09  Score=93.65  Aligned_cols=52  Identities=15%  Similarity=0.286  Sum_probs=43.7

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEE-eCCceeEeeCCCeee
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGE-LRGQTGWFPESYVEP  315 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~-~~G~~G~fPsnyV~~  315 (336)
                      ..|.+++.+...++                 |+|++||+|.|+++.+++||.|+ .+|++||||+|||++
T Consensus       121 ~~alydy~~~~~~e-----------------Lsf~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~nyv~~  173 (174)
T 3qwx_X          121 VVGTFKFTGERETD-----------------LPFEQGERLEILSKTNQDWWEARNALGTTGLVPANYVQI  173 (174)
T ss_dssp             EEESSCBCCSSTTB-----------------CCBCTTCEEEEEECCSSSEEEEECTTCCEEEEEGGGEEE
T ss_pred             EEEecCcccCCCCc-----------------cccccCCEEEEEEccCCCeEEEEECCCCEEEEChHHEEe
Confidence            45566666665555                 55999999999999999999999 699999999999985

>3jv3_A Intersectin-1; SH3 domain, DH domain, guanine nucleotide exchange factor, autoinhibition, domain-swapped, cell junction, cell project endocytosis; 2.40A {Mus musculus} PDB: 3gf9_A

Probab=98.91  E-value=1.3e-09  Score=100.23  Aligned_cols=56  Identities=25%  Similarity=0.543  Sum_probs=47.7

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~  319 (336)
                      ++|.|++.+.+.++                 |+|++||+|.|+++.++|||.|+.+|++||||+|||+.+.+.
T Consensus         5 ~~a~~~~~~~~~~e-----------------l~~~~gd~i~v~~~~~~~w~~~~~~g~~G~~P~~~v~~~~~~   60 (283)
T 3jv3_A            5 VIGMYDYTAQNDDE-----------------LAFSKGQIINVLNKEDPDWWKGEVSGQVGLFPSNYVKLTTDM   60 (283)
T ss_dssp             EEESSCBCCSSTTB-----------------CCBCTTCEEEEEECCSTTEEEEEETTEEEEEEGGGEEEGGGS
T ss_pred             EEEccccCCCCCCc-----------------CCCCCCCEEEEEecCCCCEEEEEECCCCCcCCCccccccCcc
Confidence            45667776666555                 459999999999999999999999999999999999988654

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=98.84  E-value=2.4e-09  Score=107.21  Aligned_cols=57  Identities=35%  Similarity=0.747  Sum_probs=50.5

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe--eCceeeecccceeecC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPCD  227 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~--~g~~G~fP~~yve~~~  227 (336)
                      ...++|+|||+++.++||+|++||+|.|+  +..++|||.|+.  +|+.||||+|||+...
T Consensus        85 ~~~~~alyd~~~~~~~el~~~~gd~i~v~--~~~~~~ww~~~~~~~g~~G~~P~~yv~~~~  143 (535)
T 2h8h_A           85 VTTFVALYDYESRTETDLSFKKGERLQIV--NNTEGDWWLAHSLSTGQTGYIPSNYVAPSD  143 (535)
T ss_dssp             --CEEESSCBCCCSSSBCCBCTTCEEEEE--ECSSSSEEEEEETTTCCEEEEEGGGEEETT
T ss_pred             CcEEEEccccCCcCCCcCCcCCCCEEEEE--EecCCCceEEEECCCCcceEecchhhcccc
Confidence            45799999999999999999999999996  446789999998  8999999999999864

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=98.83  E-value=3.3e-09  Score=103.78  Aligned_cols=59  Identities=24%  Similarity=0.539  Sum_probs=51.8

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEee-CceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR-GQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~-g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|||.++.++||+|++||+|.|+. ...+++||.|+.. |+.|+||+|||++...
T Consensus        11 ~~~~~aly~~~~~~~~el~~~~gd~i~v~~-~~~~~~ww~~~~~~g~~G~~P~~yv~~~~~   70 (450)
T 1k9a_A           11 GTECIAKYNFHGTAEQDLPFCKGDVLTIVA-VTKDPNWYKAKNKVGREGIIPANYVQKREG   70 (450)
T ss_dssp             TCEEEESSCBCCSSSSBCCBCTTCEEEEEE-ECSSTTEEEEECTTCCEEEEEGGGEEECCC
T ss_pred             CCEEEECCCcCccCCCcCCCCCCCEEEEee-ccCCCCceEEEECCCceeeechhccccccc
Confidence            457999999999999999999999999963 2367799999986 9999999999998653

>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens}

Probab=98.83  E-value=2.5e-09  Score=106.62  Aligned_cols=58  Identities=36%  Similarity=0.498  Sum_probs=51.8

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEE--eeCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE--LRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~--~~g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|+|.++.++||+|++||+|.|+  ...++|||.|+  .+|+.|+||+|||+.+..
T Consensus       442 ~~~~~aly~y~a~~~dELs~~~GD~i~v~--~~~~~gW~~G~~~~~g~~G~fPsnyV~~~~~  501 (526)
T 2de0_X          442 AHNQIAIYAHQPRTADEIPMEPGDIIGVA--GNHWDGYSKGVNRKLGRTGLYPSYKVREKIE  501 (526)
T ss_dssp             CCEEEECSCBCCSSTTBCCBCTTCEEEEE--EECSSSEEEEEETTTTEEEEEEGGGEEECCC
T ss_pred             ccceEEeecCCCCCCCcCCcCCCCEEEEc--cccCCCeeEEEeCCCCCEEEECchheeEccc
Confidence            35789999999999999999999999995  45789999999  589999999999998753

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=98.83  E-value=3.1e-09  Score=104.07  Aligned_cols=56  Identities=36%  Similarity=0.767  Sum_probs=50.8

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe--eCceeeecccceeecC
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPCD  227 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~--~g~~G~fP~~yve~~~  227 (336)
                      ..++|+|||.++.++||+|++||+|.|+  +..++|||.|+.  +|+.||||+|||+...
T Consensus         3 ~~~~al~~~~~~~~~el~~~~gd~~~v~--~~~~~~ww~~~~~~~g~~G~~P~~yv~~~~   60 (452)
T 1fmk_A            3 TTFVALYDYESRTETDLSFKKGERLQIV--NNTEGDWWLAHSLSTGQTGYIPSNYVAPSD   60 (452)
T ss_dssp             EEEEESSCBCCCSSSBCCBCTTCEEEES--CCCSSSEEEEEETTTCCEEEEEGGGEEETT
T ss_pred             eEEEECCccCCCCCCCCCccCCCEEEEe--ccCCCCceEEEEcCCCcccccCcccccccc
Confidence            4689999999999999999999999996  446789999998  8999999999999864

>3a98_A DOCK2, dedicator of cytokinesis protein 2; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens}

Probab=98.82  E-value=3.5e-09  Score=91.73  Aligned_cols=55  Identities=24%  Similarity=0.345  Sum_probs=44.8

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEe---CCceeEeeCCCeeecCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGEL---RGQTGWFPESYVEPCDET  319 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~---~G~~G~fPsnyV~~i~~~  319 (336)
                      ++|.|+|.+...++                 |+|++||+|.|+++.++ ||.|+.   +|+.||||+|||+++...
T Consensus        20 ~~Alydf~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~-W~~g~~~~~~g~~G~fP~nyV~~~~~~   77 (184)
T 3a98_A           20 GVAIYNFQGSGAPQ-----------------LSLQIGDVVRIQETCGD-WYRGYLIKHKMLQGIFPKSFIHIKEVT   77 (184)
T ss_dssp             EEESSCBCCSSTTB-----------------CCBCTTCEEEEEEEETT-EEEEEETTEEEEEEEEEGGGEEEECC-
T ss_pred             EEEeeeeCCCCCCC-----------------CCcCCCCEEEEEecCCC-EEEEEEecCCCceEEECcceEEEeccc
Confidence            45667777665555                 45999999999999875 999998   899999999999998754

>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D

Probab=98.78  E-value=7.4e-09  Score=101.99  Aligned_cols=57  Identities=23%  Similarity=0.315  Sum_probs=47.6

Q ss_pred             cccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCC
Q psy7077         246 ELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       246 ~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~  319 (336)
                      .+.|.|++.+.+.++                 |+|++||+|.|+++.+++||.|+.+|+.||||+|||+.+.+.
T Consensus        32 ~~~al~~~~~~~~~e-----------------L~~~~gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~   88 (466)
T 2pz1_A           32 CAEALWDHVTMDDQE-----------------LGFKAGDVIEVMDATNREWWWGRVADGEGWFPASFVRLRVNQ   88 (466)
T ss_dssp             EEEESSCBCCCCTTB-----------------CCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEECSCC
T ss_pred             EEEEccccCCCCCCc-----------------CCCCCCCEEEEEEecCCCEEEEEECCcEEEEehhHeeeccCc
Confidence            345666666665555                 559999999999999999999999999999999999988654

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=98.74  E-value=9.5e-09  Score=101.85  Aligned_cols=58  Identities=26%  Similarity=0.608  Sum_probs=51.1

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD  227 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~  227 (336)
                      ...++|+|||+++..+||+|++||+|.|+.. ..+++||.++.+|+.|+||+|||+.+.
T Consensus        43 ~~~~~alyd~~~~~~~els~~~gd~~~v~~~-~~~~~w~~~~~~~~~G~~P~~yv~~~~  100 (495)
T 1opk_A           43 PNLFVALYDFVASGDNTLSITKGEKLRVLGY-NHNGEWCEAQTKNGQGWVPSNYITPVN  100 (495)
T ss_dssp             -CEEEESSCBCCCSTTBCCBCTTCEEEEEEE-CTTSSEEEEECSSCEEEEEGGGEEESS
T ss_pred             CcEEEEeCCcCCCCCCCCCccCCCEEEEeec-CCCCCceeeeecCCcceeccccccccc
Confidence            4579999999999999999999999999743 347799999999999999999999864

>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3 domain, structural genomics center for structural genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A* 1x27_A*

Probab=98.71  E-value=1.8e-08  Score=86.39  Aligned_cols=54  Identities=20%  Similarity=0.335  Sum_probs=44.1

Q ss_pred             cccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEe--CCceeEeeCCCeeecC
Q psy7077         246 ELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPCD  317 (336)
Q Consensus       246 ~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~--~G~~G~fPsnyV~~i~  317 (336)
                      ..+|.|++.+...++                 |+|++||+|.|+++ +++||.++.  +|++|+||+|||+.+.
T Consensus        14 ~~~alydy~~~~~~e-----------------Ls~~~Gd~i~v~~~-~~~Ww~~~~~~~g~~G~vP~~yv~~~~   69 (175)
T 4d8k_A           14 LVIALHSYEPSHDGD-----------------LGFEKGEQLRILEQ-SGEWWKAQSLTTGQEGFIPFNFVAKAN   69 (175)
T ss_dssp             EEEESSCBCCCSSSB-----------------CCBCTTCEEEEEEC-CSSEEEEEETTTCCEEEEEGGGEEETT
T ss_pred             EEEEccCcCCcCCcc-----------------cccccCCEEEEEcc-CCCEEEEEECCCCceeeeccccccccc
Confidence            356667776665555                 45999999999999 678888987  8999999999999864

>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens}

Probab=98.69  E-value=2.1e-08  Score=99.97  Aligned_cols=41  Identities=29%  Similarity=0.339  Sum_probs=37.9

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEE--eCCceeEeeCCCeeecCC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGE--LRGQTGWFPESYVEPCDE  318 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~--~~G~~G~fPsnyV~~i~~  318 (336)
                      |+|++||+|.|+++.++|||.|+  .+|++|+||+|||+.+.+
T Consensus       459 Ls~~~GD~i~v~~~~~~gW~~G~~~~~g~~G~fPsnyV~~~~~  501 (526)
T 2de0_X          459 IPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYPSYKVREKIE  501 (526)
T ss_dssp             CCBCTTCEEEEEEECSSSEEEEEETTTTEEEEEEGGGEEECCC
T ss_pred             CCcCCCCEEEEccccCCCeeEEEeCCCCCEEEECchheeEccc
Confidence            56999999999999999999999  699999999999998764

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=98.68  E-value=1.7e-08  Score=98.70  Aligned_cols=56  Identities=27%  Similarity=0.526  Sum_probs=49.7

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEE--eeCceeeecccceeecC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE--LRGQTGWFPESYVEPCD  227 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~--~~g~~G~fP~~yve~~~  227 (336)
                      ...++|+|||.++.++||+|++||+|.|++  + +++||.|+  .+|+.|+||+|||+.+.
T Consensus         8 ~~~~~al~~~~~~~~~el~~~~gd~~~v~~--~-~~~W~~~~~~~~g~~G~~P~~yv~~~~   65 (454)
T 1qcf_A            8 RIIVVALYDYEAIHHEDLSFQKGDQMVVLE--E-SGEWWKARSLATRKEGYIPSNYVARVD   65 (454)
T ss_dssp             CCEEEESSCBCCCSTTBCCBCTTCEEEEEE--C-CTTEEEEEETTTCCEEEEEGGGEEETT
T ss_pred             CeEEEECcccCCcCCCcCcccCCCEEEEEe--c-CCCCeEEEECCCCceEEecchhccccc
Confidence            356999999999999999999999999963  3 47899999  58999999999999865

>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}

Probab=98.67  E-value=2.3e-09  Score=106.42  Aligned_cols=57  Identities=40%  Similarity=0.756  Sum_probs=0.0

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEee-Cceeeecccceeec
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR-GQTGWFPESYVEPC  226 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~-g~~G~fP~~yve~~  226 (336)
                      ...++|+|||.++.++||+|.+||+|.|+. ...++|||.|+.. |+.||||++||+.+
T Consensus       428 ~~~~~alydy~~~~~~eLsf~~Gd~i~vl~-~~~~~~Ww~g~~~~g~~G~~P~nyv~~i  485 (486)
T 3haj_A          428 EVRVRALYDYEGQEHDELSFKAGDELTKME-DEDEQGWCKGRLDNGQVGLYPANYVEAI  485 (486)
T ss_dssp             -----------------------------------------------------------
T ss_pred             CeEEEEccccCCCCCCcCccCCCCEEEEEE-ecCCCCeeEEEeCCCCEEEEeHHHceeC
Confidence            457999999999999999999999999863 2335699999987 99999999999875

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=98.66  E-value=2.2e-08  Score=100.17  Aligned_cols=40  Identities=33%  Similarity=0.631  Sum_probs=37.1

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEe--CCceeEeeCCCeeecC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPCD  317 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~--~G~~G~fPsnyV~~i~  317 (336)
                      |+|++||+|.|+++.+++||.|+.  +|++||||+|||+..+
T Consensus       102 l~~~~gd~i~v~~~~~~~ww~~~~~~~g~~G~~P~~yv~~~~  143 (535)
T 2h8h_A          102 LSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSD  143 (535)
T ss_dssp             CCBCTTCEEEEEECSSSSEEEEEETTTCCEEEEEGGGEEETT
T ss_pred             CCcCCCCEEEEEEecCCCceEEEECCCCcceEecchhhcccc
Confidence            559999999999999999999998  8999999999999864

>1ri9_A FYN-binding protein; SH3-like, helically extended, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=98.60  E-value=2.4e-08  Score=76.77  Aligned_cols=58  Identities=16%  Similarity=0.233  Sum_probs=47.4

Q ss_pred             ceeeeeeeec--ccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe-eCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEF--VSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL-RGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df--~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~-~g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|+|  ...+..+|+|++|+++.|+.  ..+.+||.|++ .|+.|+||.+||+.++.
T Consensus        39 l~~~~a~~~f~~~k~g~~DLpfkkGE~LeVI~--~~e~~wwLcRNs~GkyGyVP~~yl~~~d~   99 (102)
T 1ri9_A           39 LYSTKVTTSITSKKWGTRDLQVKPGESLEVIQ--TTDDTKVLCRNEEGKYGYVLRSYLADNDG   99 (102)
T ss_dssp             SSCCBCCTTSCSSCCCTTBCCCCTTCBCEEEE--ESSSSEEEEEETTTEEEEEEGGGSCC---
T ss_pred             EEEEEEeeccccccCCcccCCcCCCCEEEEEE--eCCCCEEEEECCCCCCCceeHHHhccccc
Confidence            3567888888  66789999999999999964  45679999997 79999999999987763

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=98.56  E-value=8.8e-08  Score=93.60  Aligned_cols=56  Identities=21%  Similarity=0.385  Sum_probs=46.2

Q ss_pred             cccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEee-cCCCeEEEEeC-CceeEeeCCCeeecCC
Q psy7077         246 ELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQN-AEPGWLAGELR-GQTGWFPESYVEPCDE  318 (336)
Q Consensus       246 ~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~-~~~~W~~g~~~-G~~G~fPsnyV~~i~~  318 (336)
                      .++|.|++.+...+++                 +|++||+|.|+++ .+++||.|+.. |++|+||+|||+..+.
T Consensus        13 ~~~aly~~~~~~~~el-----------------~~~~gd~i~v~~~~~~~~ww~~~~~~g~~G~~P~~yv~~~~~   70 (450)
T 1k9a_A           13 ECIAKYNFHGTAEQDL-----------------PFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKREG   70 (450)
T ss_dssp             EEEESSCBCCSSSSBC-----------------CBCTTCEEEEEEECSSTTEEEEECTTCCEEEEEGGGEEECCC
T ss_pred             EEEECCCcCccCCCcC-----------------CCCCCCEEEEeeccCCCCceEEEECCCceeeechhccccccc
Confidence            3567778877766654                 4999999999998 67789999886 9999999999998654

>1kjw_A Postsynaptic density protein 95; protein-protein interaction, scaffold, neuropeptide; 1.80A {Rattus norvegicus} SCOP: b.34.2.1 c.37.1.1 PDB: 1jxm_A* 1jxo_A

Probab=98.55  E-value=1.3e-08  Score=94.53  Aligned_cols=54  Identities=20%  Similarity=0.401  Sum_probs=46.5

Q ss_pred             eeeeeeecccCCCC-----CCCCCCCCEEEEeeeecCCCCeEEEEeeC------ceeeecccceeec
Q psy7077         171 RYRAIYEFVSRNGD-----ELSFQPGDIIMVPVKQNAEPGWLAGELRG------QTGWFPESYVEPC  226 (336)
Q Consensus       171 ~~~al~df~a~~~~-----eLs~~~Gdii~v~~~~~~~~gW~~g~~~g------~~G~fP~~yve~~  226 (336)
                      .++|+|||+++.++     +|+|++||++.|+  ++.++|||.|+..+      +.|+||+||+.+.
T Consensus         3 ~vrAlydy~~~~~~~~p~~eLsf~~GDil~V~--~~~d~~WW~a~~~~~~~~~~~~G~iPsny~~e~   67 (295)
T 1kjw_A            3 YIRALFDYDKTKDCGFLSQALSFRFGDVLHVI--DAGDEEWWQARRVHSDSETDDIGFIPSKRRVER   67 (295)
T ss_dssp             EEEESSCBCHHHHHCCCSSBCCBCTTCEEEEE--ECCSSSEEEEEECCSSCCCSCCEEEECHHHHHH
T ss_pred             EEEEeeccCCCCCCCCCCcCCcCCCCCEEEEE--EeCCCCeEEEEECCCCCccCceeEeecHHHHHH
Confidence            58899999998877     9999999999995  45788999999742      7899999999653

>1ug1_A KIAA1010 protein; structural genomics, SH3 domain, hypothetical protein BAA76854.1, riken structural genomics/proteomics initiative RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=98.55  E-value=3.4e-07  Score=68.78  Aligned_cols=61  Identities=16%  Similarity=0.264  Sum_probs=47.1

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeec--CCCCeEEEEeeCceeeecccceeecCCCC
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQN--AEPGWLAGELRGQTGWFPESYVEPCDETG  230 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~--~~~gW~~g~~~g~~G~fP~~yve~~~~~~  230 (336)
                      ..+.+..++.+...-||++++||+|.|+.+.+  .+.+||++..+|+.||||++||+++....
T Consensus        18 ~LY~~t~~~~~tq~~dl~l~~GdlVAVl~k~Dp~Gn~srW~Vdtgg~~GyvPs~yLe~~~~~~   80 (92)
T 1ug1_A           18 KLFQAERNFNAAQDLDVSLLEGDLVGVIKKKDPMGSQNRWLIDNGVTKGFVYSSFLKPYNPRR   80 (92)
T ss_dssp             GEEEESSCCCCCSSSCCCCCTTCEEEEEESCCTTSCSSEEEEECSSSEEEEEGGGEEECCCCS
T ss_pred             heEEeccCcCCCCceeeeecCCCEEEEEecCCCCCCCcceEEECCCcEEeeEhhhceEcccCC
Confidence            45666667777788899999999999975432  23445657669999999999999998543

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=98.53  E-value=6.6e-08  Score=94.54  Aligned_cols=53  Identities=26%  Similarity=0.454  Sum_probs=44.9

Q ss_pred             cccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEe--CCceeEeeCCCeeecC
Q psy7077         248 IAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPCD  317 (336)
Q Consensus       248 ~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~--~G~~G~fPsnyV~~i~  317 (336)
                      +|.|++.+...++                 |+|++||+|.|+++.+++||.|+.  +|++||||+|||+..+
T Consensus         6 ~al~~~~~~~~~e-----------------l~~~~gd~~~v~~~~~~~ww~~~~~~~g~~G~~P~~yv~~~~   60 (452)
T 1fmk_A            6 VALYDYESRTETD-----------------LSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSD   60 (452)
T ss_dssp             EESSCBCCCSSSB-----------------CCBCTTCEEEESCCCSSSEEEEEETTTCCEEEEEGGGEEETT
T ss_pred             EECCccCCCCCCC-----------------CCccCCCEEEEeccCCCCceEEEEcCCCcccccCcccccccc
Confidence            4566676666555                 459999999999999999999998  8999999999999864

>2gtj_A FYN-binding protein; SH3, redox, signaling protein; NMR {Homo sapiens} PDB: 2gto_A

Probab=98.46  E-value=9.6e-08  Score=72.78  Aligned_cols=58  Identities=26%  Similarity=0.322  Sum_probs=49.3

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe-eCceeeecccceeecC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL-RGQTGWFPESYVEPCD  227 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~-~g~~G~fP~~yve~~~  227 (336)
                      ...++|+++ ...+..+|+|.+|+++.|+.....++|||.+++ .|+.|+||.+||+.-.
T Consensus        28 l~~a~a~~~-~k~g~~dLp~~~GE~LeII~~~e~p~g~Wl~RN~~G~~GyVp~~~v~vd~   86 (96)
T 2gtj_A           28 IHLAKACCD-VKGGKNELSFKQGEQIEIIRITDNPEGKWLGRTARGSYGYIKTTAVEIDY   86 (96)
T ss_dssp             CEEEEESSC-EECTTSCCEECTTCCEEEEECTTCSSSCCEEECTTCCBCCCCGGGEEECS
T ss_pred             EEEEEEeec-CCCCcccCCcCCCCEEEEEEccCCCCCeEEEECCCCCCCccchhhEEEEh
Confidence            356788998 566899999999999999866556689999997 7999999999998744

>1u3o_A Huntingtin-associated protein-interacting protein; SH3, CIS-proline,, signaling protein; NMR {Rattus norvegicus}

Probab=98.46  E-value=1.7e-07  Score=69.61  Aligned_cols=36  Identities=25%  Similarity=0.449  Sum_probs=29.3

Q ss_pred             CCCCCCCEEEEEeecC--CCeEEEEe----CCceeEeeCCCe
Q psy7077         278 PIMGLGTVVPVKQNAE--PGWLAGEL----RGQTGWFPESYV  313 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~--~~W~~g~~----~G~~G~fPsnyV  313 (336)
                      |+|++||+|+|+++..  ++||..+.    .+++|+||+|||
T Consensus        34 LS~~kGd~vevle~~~~~peW~lvr~~~~~~~qeGlVPsnyl   75 (82)
T 1u3o_A           34 LSIQVGQTVELLERPSERPGWCLVRTTERSPPQEGLVPSSTL   75 (82)
T ss_dssp             CCBCTTCEEEESSCTTSSTTEEEEEESSSSSCEEEEEEGGGS
T ss_pred             eeEcCCCEEEEEecCCCCCCEEEEEECCCCCCcEeeccccEE
Confidence            5599999999999873  56666764    347899999999

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=98.41  E-value=2.6e-07  Score=91.45  Aligned_cols=40  Identities=20%  Similarity=0.533  Sum_probs=36.7

Q ss_pred             CCCCCCCEEEEEeec-CCCeEEEEeCCceeEeeCCCeeecC
Q psy7077         278 PIMGLGTVVPVKQNA-EPGWLAGELRGQTGWFPESYVEPCD  317 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~-~~~W~~g~~~G~~G~fPsnyV~~i~  317 (336)
                      |+|++||+|.|+++. ++|||.++.+|+.|+||+|||+.+.
T Consensus        60 ls~~~gd~~~v~~~~~~~~w~~~~~~~~~G~~P~~yv~~~~  100 (495)
T 1opk_A           60 LSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITPVN  100 (495)
T ss_dssp             CCBCTTCEEEEEEECTTSSEEEEECSSCEEEEEGGGEEESS
T ss_pred             CCccCCCEEEEeecCCCCCceeeeecCCcceeccccccccc
Confidence            559999999999987 8899999999999999999999864

>1ug1_A KIAA1010 protein; structural genomics, SH3 domain, hypothetical protein BAA76854.1, riken structural genomics/proteomics initiative RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=98.41  E-value=6e-07  Score=67.48  Aligned_cols=42  Identities=19%  Similarity=0.336  Sum_probs=34.7

Q ss_pred             CCCCCCCCEEEEEeecC-----CCeEEEEeCCceeEeeCCCeeecCCC
Q psy7077         277 SPIMGLGTVVPVKQNAE-----PGWLAGELRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       277 ~Lsf~~Gd~V~V~~~~~-----~~W~~g~~~G~~G~fPsnyV~~i~~~  319 (336)
                      +|+|.+||+|.|+++.|     .+|| ...+|+.||||++||+++...
T Consensus        33 dl~l~~GdlVAVl~k~Dp~Gn~srW~-Vdtgg~~GyvPs~yLe~~~~~   79 (92)
T 1ug1_A           33 DVSLLEGDLVGVIKKKDPMGSQNRWL-IDNGVTKGFVYSSFLKPYNPR   79 (92)
T ss_dssp             CCCCCTTCEEEEEESCCTTSCSSEEE-EECSSSEEEEEGGGEEECCCC
T ss_pred             eeeecCCCEEEEEecCCCCCCCcceE-EECCCcEEeeEhhhceEcccC
Confidence            47799999999998853     3677 444999999999999999754

>3pvl_A Myosin VIIA isoform 1; protein complex, novel folding, protein cargo binding, cargo proteins, motor protein-protein transport complex; 2.80A {Mus musculus}

Probab=98.41  E-value=1.3e-07  Score=96.85  Aligned_cols=61  Identities=25%  Similarity=0.353  Sum_probs=48.6

Q ss_pred             ceeeeeeeecc---cCCCCCCCCCCCCEEEEeeeec---CCCCeEEEE--eeCceeeecccceeecCCC
Q psy7077         169 YRRYRAIYEFV---SRNGDELSFQPGDIIMVPVKQN---AEPGWLAGE--LRGQTGWFPESYVEPCDET  229 (336)
Q Consensus       169 ~~~~~al~df~---a~~~~eLs~~~Gdii~v~~~~~---~~~gW~~g~--~~g~~G~fP~~yve~~~~~  229 (336)
                      ...++|+|||.   +.++++|+|++||+|.+.....   .++|||.|+  .+|++|+||++||..+..-
T Consensus       573 s~~~~Al~d~~~~~~~~~~~L~f~kGDlI~l~~~~~~~~~~~~W~~G~~~~~g~~G~fP~~~V~~lptl  641 (655)
T 3pvl_A          573 SKYVVALQDNPNPAGEESGFLSFAKGDLIILDHDTGEQVMNSGWANGINERTKQRGDFPTDCVYVMPTV  641 (655)
T ss_dssp             CCEEEESSCCCC-----CCBCCCCTTCEEEESSCCHHHHHHSSEEEEEETTTCCEEEEEGGGEEECCCS
T ss_pred             chhhhHHhhcccCCCCCCCcccccCCCEEEEccccCcccCCCCeEEEEeCCCCceEEeEhhhEEECCCC
Confidence            45789999999   6788999999999999853210   368999999  4799999999999998754

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=98.37  E-value=3.4e-07  Score=89.48  Aligned_cols=53  Identities=17%  Similarity=0.304  Sum_probs=43.3

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEE--eCCceeEeeCCCeeecC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGE--LRGQTGWFPESYVEPCD  317 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~--~~G~~G~fPsnyV~~i~  317 (336)
                      .+|.|++.+...++                 |+|++||+|.|+++. ++||.|+  .+|++|+||+|||+.+.
T Consensus        11 ~~al~~~~~~~~~e-----------------l~~~~gd~~~v~~~~-~~W~~~~~~~~g~~G~~P~~yv~~~~   65 (454)
T 1qcf_A           11 VVALYDYEAIHHED-----------------LSFQKGDQMVVLEES-GEWWKARSLATRKEGYIPSNYVARVD   65 (454)
T ss_dssp             EEESSCBCCCSTTB-----------------CCBCTTCEEEEEECC-TTEEEEEETTTCCEEEEEGGGEEETT
T ss_pred             EEECcccCCcCCCc-----------------CcccCCCEEEEEecC-CCCeEEEECCCCceEEecchhccccc
Confidence            45667777766555                 459999999999985 6788888  79999999999999875

>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}

Probab=98.35  E-value=5.5e-08  Score=96.44  Aligned_cols=39  Identities=31%  Similarity=0.663  Sum_probs=0.0

Q ss_pred             CCCCCCCEEEEEeecC-CCeEEEEeC-CceeEeeCCCeeec
Q psy7077         278 PIMGLGTVVPVKQNAE-PGWLAGELR-GQTGWFPESYVEPC  316 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~-~~W~~g~~~-G~~G~fPsnyV~~i  316 (336)
                      |+|.+||+|.|+.+.+ +|||.|+++ |++||||+|||+.+
T Consensus       445 Lsf~~Gd~i~vl~~~~~~~Ww~g~~~~g~~G~~P~nyv~~i  485 (486)
T 3haj_A          445 LSFKAGDELTKMEDEDEQGWCKGRLDNGQVGLYPANYVEAI  485 (486)
T ss_dssp             -----------------------------------------
T ss_pred             CccCCCCEEEEEEecCCCCeeEEEeCCCCEEEEeHHHceeC
Confidence            6699999999998874 599999988 99999999999976

>1ri9_A FYN-binding protein; SH3-like, helically extended, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=98.32  E-value=3.4e-07  Score=70.36  Aligned_cols=42  Identities=19%  Similarity=0.228  Sum_probs=35.2

Q ss_pred             CCCCCCCCEEEEEeecCCCeEEEEe-CCceeEeeCCCeeecCC
Q psy7077         277 SPIMGLGTVVPVKQNAEPGWLAGEL-RGQTGWFPESYVEPCDE  318 (336)
Q Consensus       277 ~Lsf~~Gd~V~V~~~~~~~W~~g~~-~G~~G~fPsnyV~~i~~  318 (336)
                      +|+|++||++.|++..+++||.++. +|+.|++|.|||..+++
T Consensus        57 DLpfkkGE~LeVI~~~e~~wwLcRNs~GkyGyVP~~yl~~~d~   99 (102)
T 1ri9_A           57 DLQVKPGESLEVIQTTDDTKVLCRNEEGKYGYVLRSYLADNDG   99 (102)
T ss_dssp             BCCCCTTCBCEEEEESSSSEEEEEETTTEEEEEEGGGSCC---
T ss_pred             cCCcCCCCEEEEEEeCCCCEEEEECCCCCCCceeHHHhccccc
Confidence            4779999999999998888888765 89999999999998764

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B

Probab=98.16  E-value=2e-06  Score=76.24  Aligned_cols=59  Identities=19%  Similarity=0.447  Sum_probs=49.6

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCC-CCeEEEEeeCceeeecccceeecC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAE-PGWLAGELRGQTGWFPESYVEPCD  227 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~-~gW~~g~~~g~~G~fP~~yve~~~  227 (336)
                      .....++|+|.++.+.+|.++.|+++.++.....+ .+||.++.+|+.|+||.+||+.+.
T Consensus       170 ~~~~~al~d~~~~~~~eLa~~~G~~i~vl~~~~~~~~~Ww~~~~~~~~G~~P~~yv~~~~  229 (239)
T 1ycs_B          170 KGVIYALWDYEPQNDDELPMKEGDCMTIIHREDEDEIEWWWARLNDKEGYVPRNLLGLYP  229 (239)
T ss_dssp             GGEEEESSCBCCSSTTBCCBCSSCEEEECCCCTTSCSSEEEEEETTEEEEEEGGGEECCC
T ss_pred             cceEEEEeccCCCCCCcccccCCCEEEEEEecCCCCCCEEEEEECCcEEEeehHHeeECC
Confidence            34578999999999999999999999997432221 259999999999999999999874

>3pvl_A Myosin VIIA isoform 1; protein complex, novel folding, protein cargo binding, cargo proteins, motor protein-protein transport complex; 2.80A {Mus musculus}

Probab=98.16  E-value=1.1e-06  Score=89.94  Aligned_cols=44  Identities=20%  Similarity=0.324  Sum_probs=38.8

Q ss_pred             CCCCCCCCEEEEEee-----cCCCeEEEE--eCCceeEeeCCCeeecCCCC
Q psy7077         277 SPIMGLGTVVPVKQN-----AEPGWLAGE--LRGQTGWFPESYVEPCDETG  320 (336)
Q Consensus       277 ~Lsf~~Gd~V~V~~~-----~~~~W~~g~--~~G~~G~fPsnyV~~i~~~~  320 (336)
                      .|+|++||+|.|.++     .+++||.|+  .+|++|+||++||..+..-+
T Consensus       592 ~L~f~kGDlI~l~~~~~~~~~~~~W~~G~~~~~g~~G~fP~~~V~~lptl~  642 (655)
T 3pvl_A          592 FLSFAKGDLIILDHDTGEQVMNSGWANGINERTKQRGDFPTDCVYVMPTVT  642 (655)
T ss_dssp             BCCCCTTCEEEESSCCHHHHHHSSEEEEEETTTCCEEEEEGGGEEECCCSS
T ss_pred             cccccCCCEEEEccccCcccCCCCeEEEEeCCCCceEEeEhhhEEECCCCC
Confidence            478999999999988     578999999  78999999999999997543

>1kjw_A Postsynaptic density protein 95; protein-protein interaction, scaffold, neuropeptide; 1.80A {Rattus norvegicus} SCOP: b.34.2.1 c.37.1.1 PDB: 1jxm_A* 1jxo_A

Probab=98.15  E-value=3.9e-07  Score=84.60  Aligned_cols=48  Identities=23%  Similarity=0.476  Sum_probs=43.4

Q ss_pred             EEEEecccCCCCCC-----CccccCCCEEEEEee-cCCceecccCC------Cccccccc
Q psy7077         119 YYIAAYPYDSTEPG-----DLTFNQDEVIYVTKK-ENDWWTGTIGD------RTARFRGV  166 (336)
Q Consensus       119 ~~~al~dy~~~~~~-----eLs~~~Gd~i~v~~~-~~~Ww~g~~~~------~~g~~p~~  166 (336)
                      +++|+|||.++.++     ||+|++||++.|+++ +++||.|+..+      +.|+||++
T Consensus         3 ~vrAlydy~~~~~~~~p~~eLsf~~GDil~V~~~~d~~WW~a~~~~~~~~~~~~G~iPsn   62 (295)
T 1kjw_A            3 YIRALFDYDKTKDCGFLSQALSFRFGDVLHVIDAGDEEWWQARRVHSDSETDDIGFIPSK   62 (295)
T ss_dssp             EEEESSCBCHHHHHCCCSSBCCBCTTCEEEEEECCSSSEEEEEECCSSCCCSCCEEEECH
T ss_pred             EEEEeeccCCCCCCCCCCcCCcCCCCCEEEEEEeCCCCeEEEEECCCCCccCceeEeecH
Confidence            58999999999888     999999999999998 99999998753      67999986

>4dey_A Voltage-dependent L-type calcium channel subunit; maguk, voltage dependent calcium channel, transport protein; 1.95A {Oryctolagus cuniculus} PDB: 4dex_A 1t3l_A 1t3s_A 1vyv_A 1vyu_A 1vyt_A 1t0h_B 1t0j_B 1t0h_A 1t0j_A

Probab=98.15  E-value=1.5e-06  Score=81.45  Aligned_cols=52  Identities=21%  Similarity=0.434  Sum_probs=44.5

Q ss_pred             ceeeeeeeecccCCCC-------CCCCCCCCEEEEeeeecCCCCeEEEEe---eCceeeecccc
Q psy7077         169 YRRYRAIYEFVSRNGD-------ELSFQPGDIIMVPVKQNAEPGWLAGEL---RGQTGWFPESY  222 (336)
Q Consensus       169 ~~~~~al~df~a~~~~-------eLs~~~Gdii~v~~~~~~~~gW~~g~~---~g~~G~fP~~y  222 (336)
                      ...++|+|||.++..+       +|+|++||++.|+  +..+++||.|+.   +|..|+||+++
T Consensus        38 ~~~vrAlfdY~~~~d~d~P~~e~~LsF~~GDiL~V~--~~~d~~WWqar~~~~~g~~GlIPS~~   99 (337)
T 4dey_A           38 AFAVRTNVSYSAAHEDDVPVPGMAISFEAKDFLHVK--EKFNNDWWIGRLVKEGCEIGFIPSPV   99 (337)
T ss_dssp             CEEEEESSCBCCCGGGCCSSTTCBCCBCTTCEEEEE--EECSSSEEEEEESSTTCCCEEEECHH
T ss_pred             cEEEEEccccCCCCCCCCCcccccccccCCCEEEEE--ecCCCCeEEEEECCCCCCccEecCHH
Confidence            4678999999998665       4999999999995  457889999997   47899999987

>4dey_A Voltage-dependent L-type calcium channel subunit; maguk, voltage dependent calcium channel, transport protein; 1.95A {Oryctolagus cuniculus} PDB: 4dex_A 1t3l_A 1t3s_A 1vyv_A 1vyu_A 1vyt_A 1t0h_B 1t0j_B 1t0h_A 1t0j_A

Probab=98.09  E-value=1.7e-06  Score=81.10  Aligned_cols=48  Identities=23%  Similarity=0.542  Sum_probs=43.7

Q ss_pred             EEEEecccCCCCCCC-------ccccCCCEEEEEee-cCCceeccc---CCCccccccc
Q psy7077         119 YYIAAYPYDSTEPGD-------LTFNQDEVIYVTKK-ENDWWTGTI---GDRTARFRGV  166 (336)
Q Consensus       119 ~~~al~dy~~~~~~e-------Ls~~~Gd~i~v~~~-~~~Ww~g~~---~~~~g~~p~~  166 (336)
                      +++|+|||.+..+++       |+|++||++.|+++ +++||.|+.   +|..|++|+.
T Consensus        40 ~vrAlfdY~~~~d~d~P~~e~~LsF~~GDiL~V~~~~d~~WWqar~~~~~g~~GlIPS~   98 (337)
T 4dey_A           40 AVRTNVSYSAAHEDDVPVPGMAISFEAKDFLHVKEKFNNDWWIGRLVKEGCEIGFIPSP   98 (337)
T ss_dssp             EEEESSCBCCCGGGCCSSTTCBCCBCTTCEEEEEEECSSSEEEEEESSTTCCCEEEECH
T ss_pred             EEEEccccCCCCCCCCCcccccccccCCCEEEEEecCCCCeEEEEECCCCCCccEecCH
Confidence            899999999998776       99999999999999 899999987   4678999986

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B

Probab=97.99  E-value=6.2e-06  Score=73.02  Aligned_cols=40  Identities=15%  Similarity=0.355  Sum_probs=36.2

Q ss_pred             CCCCCCCEEEEEeecCCC---eEEEEeCCceeEeeCCCeeecC
Q psy7077         278 PIMGLGTVVPVKQNAEPG---WLAGELRGQTGWFPESYVEPCD  317 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~---W~~g~~~G~~G~fPsnyV~~i~  317 (336)
                      |+|+.|++|.|+.+.+++   ||.++.+|+.|+||++||+.+.
T Consensus       187 La~~~G~~i~vl~~~~~~~~~Ww~~~~~~~~G~~P~~yv~~~~  229 (239)
T 1ycs_B          187 LPMKEGDCMTIIHREDEDEIEWWWARLNDKEGYVPRNLLGLYP  229 (239)
T ss_dssp             CCBCSSCEEEECCCCTTSCSSEEEEEETTEEEEEEGGGEECCC
T ss_pred             ccccCCCEEEEEEecCCCCCCEEEEEECCcEEEeehHHeeECC
Confidence            669999999999887665   9999999999999999999884

>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A

Probab=97.86  E-value=1.1e-05  Score=77.67  Aligned_cols=54  Identities=20%  Similarity=0.286  Sum_probs=45.5

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeec---CCCCeEEEEeeC------ceeeecccceee
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQN---AEPGWLAGELRG------QTGWFPESYVEP  225 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~---~~~gW~~g~~~g------~~G~fP~~yve~  225 (336)
                      ..++|+|||.+..+.+|+|++||++.|+  ..   .+.+||.++..+      ..|+||++|+..
T Consensus       107 ~~vral~dy~~~~~~~Lsf~~Gdil~V~--~~~~~~d~~wW~a~~~~~~~~~~~~G~IPs~~~~e  169 (391)
T 3tsz_A          107 FYIRTHFEYEKESPYGLSFNKGEVFRVV--DTLYNGKLGSWLAIRIGKNHKEVERGIIPNKNRAE  169 (391)
T ss_dssp             EEEEECSCBCCSSTTBCCBCTTCEEEEE--ESSGGGSSSEEEEEEECGGGCEEEEEEEECHHHHH
T ss_pred             cccccccccCCCCCCcceEccCCEEEEE--eccCCCCCCeEEEEEeCCCCCcccCCEecCHHHHH
Confidence            4677999999999999999999999995  34   467899998632      489999999864

>2gtj_A FYN-binding protein; SH3, redox, signaling protein; NMR {Homo sapiens} PDB: 2gto_A

Probab=97.84  E-value=5.7e-06  Score=62.98  Aligned_cols=43  Identities=19%  Similarity=0.334  Sum_probs=34.0

Q ss_pred             CCCCCCCCEEEEEeecC--C-CeEEEEeCCceeEeeCCCeeecCCC
Q psy7077         277 SPIMGLGTVVPVKQNAE--P-GWLAGELRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       277 ~Lsf~~Gd~V~V~~~~~--~-~W~~g~~~G~~G~fPsnyV~~i~~~  319 (336)
                      +|+|++|+++.|++..+  + ||++...+|+.|++|.+||++-..+
T Consensus        43 dLp~~~GE~LeII~~~e~p~g~Wl~RN~~G~~GyVp~~~v~vd~~~   88 (96)
T 2gtj_A           43 ELSFKQGEQIEIIRITDNPEGKWLGRTARGSYGYIKTTAVEIDYDS   88 (96)
T ss_dssp             CCEECTTCCEEEEECTTCSSSCCEEECTTCCBCCCCGGGEEECSSC
T ss_pred             cCCcCCCCEEEEEEccCCCCCeEEEECCCCCCCccchhhEEEEhHH
Confidence            36699999999998875  3 4554456899999999999876543

>3kfv_A Tight junction protein ZO-3; structural genomics consortium, SGC, cell junction, cell membrane, membrane, SH3 domain; 2.80A {Homo sapiens}

Probab=97.82  E-value=1.3e-05  Score=74.54  Aligned_cols=54  Identities=20%  Similarity=0.290  Sum_probs=42.4

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCC---------CeEEEEee------Cceeeecccceee
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEP---------GWLAGELR------GQTGWFPESYVEP  225 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~---------gW~~g~~~------g~~G~fP~~yve~  225 (336)
                      ..++|+|||.++.+++|+|++||++.|+  +..++         |||.+..-      +..|++|.+|+..
T Consensus         5 fyVRalfdy~~~~~~eL~F~kGDil~V~--dt~~~~~~~~~~~~gwW~A~~~~~~~~~~~~G~IPs~~~ae   73 (308)
T 3kfv_A            5 FYIRTHFELEPSPPSGLGFTRGDVFHVL--DTLHPGPGQSHARGGHWLAVRMGRDLREQERGIIPNQSRAE   73 (308)
T ss_dssp             EEEEECSCBCCCSSSBCCBCTTCEEEEE--EC-------------CEEEEEECTTSCEEEEEEECCHHHHH
T ss_pred             EEEEEecCcCCCCcccCCCccCCEEEEc--cccCCCcccccccCceEEEEecCCCCCcCCCCeeechHHHH
Confidence            4577999999999999999999999996  33444         49999863      2689999998753

>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}

Probab=97.77  E-value=1.6e-05  Score=82.43  Aligned_cols=55  Identities=20%  Similarity=0.378  Sum_probs=46.2

Q ss_pred             eeeeeeeecccCCCCC-----CCCCCCCEEEEeeeecCCCCeEEEEee------Cceeeecccceeec
Q psy7077         170 RRYRAIYEFVSRNGDE-----LSFQPGDIIMVPVKQNAEPGWLAGELR------GQTGWFPESYVEPC  226 (336)
Q Consensus       170 ~~~~al~df~a~~~~e-----Ls~~~Gdii~v~~~~~~~~gW~~g~~~------g~~G~fP~~yve~~  226 (336)
                      ..++|+|||+++..++     |+|++||++.|+  ...+++||.++..      ++.|+||++|+.+-
T Consensus       428 ~~vrAl~dy~~~~d~~~p~~~LsF~~GDil~v~--~~~~~~WW~a~~~~~~~~~~~~G~iPs~~~~e~  493 (721)
T 2xkx_A          428 FYIRALFDYDKTKDCGFLSQALSFRFGDVLHVI--DAGDEEWWQARRVHSDSETDDIGFIPSKRRVER  493 (721)
T ss_pred             eeEEEeeccCcCCCCCCccccccccCCCEEEEe--ecCCCCeEEEEECCCCCccCccceeecHHHHHH
Confidence            4578999999998888     999999999995  4567899999863      35699999998543

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A

Probab=97.69  E-value=3.3e-05  Score=67.12  Aligned_cols=57  Identities=35%  Similarity=0.724  Sum_probs=50.8

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD  227 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~  227 (336)
                      ...++++|+|.++..++|+|++||++.+.  ...+.+||.+...|+.|++|.+|+...+
T Consensus        14 ~~~~~al~d~~~~~~~el~~~~Gd~~~v~--~~~~~~w~~~~~~g~~gl~p~~~v~~~~   70 (222)
T 3ehr_A           14 VKVFRALYTFEPRTPDELYIEEGDIIYIT--DMSDTNWWKGTSKGRTGLIPSNYVAEQA   70 (222)
T ss_dssp             CEEEEESSCCCCSSTTBCCCCTTCEEEEE--ECCSSSEEEEEETTEEEEEEHHHHHHHE
T ss_pred             ceEEEEeCCcCCCCCCcccccCCCEEEEe--ccccchhHhcccCCcceeechhhccccc
Confidence            45789999999999999999999999984  4578899999999999999999987654

>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}

Probab=97.64  E-value=3.5e-05  Score=75.62  Aligned_cols=54  Identities=19%  Similarity=0.254  Sum_probs=45.4

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeec---CCCCeEEEEe---eC---ceeeecccceee
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQN---AEPGWLAGEL---RG---QTGWFPESYVEP  225 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~---~~~gW~~g~~---~g---~~G~fP~~yve~  225 (336)
                      ..++|+|+|.+..+.+|+|++||++.|+  ..   .+.+||.++.   ++   +.|+||++|+..
T Consensus        99 ~yVralfdy~~~~~~~LsF~~GDIL~V~--d~~~~~d~~wW~A~~~~~~~~~~~~GlIPs~~~~e  161 (468)
T 3shw_A           99 FYIRTHFEYEKESPYGLSFNKGEVFRVV--DTLYNGKLGSWLAIRIGKNHKEVERGIIPNKNRAE  161 (468)
T ss_dssp             EEEEECSCBCCSSTTBCCBCTTCEEEEE--ESSGGGCTTEEEEEEECTTSCEEEEEEEECHHHHH
T ss_pred             cccccccCcCCCCCCCceEccCCEEEEe--ecccCCCCCeEEEEEcCCCCcccccceecCHHHHH
Confidence            4678999999999999999999999995  33   4678999986   23   589999999864

>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens}

Probab=97.44  E-value=0.00013  Score=67.10  Aligned_cols=55  Identities=15%  Similarity=0.108  Sum_probs=44.0

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe-eCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL-RGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~-~g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|||.+.   ++++.+|+.+.+.  ...++.||.++. +|..|++|++|+...++
T Consensus       198 ~~~v~al~dy~~~---e~~~~kge~~~l~--~~s~~~wW~v~~~~G~~g~vPs~~~~ip~p  253 (283)
T 3pe0_A          198 RLPLLAVCDYKQV---EVTVHKGDECQLV--GPAQPSHWKVLSSSGSEAAVPSVCFLVPPP  253 (283)
T ss_dssp             CEEEEECSCEECS---SCEECTTCEEEEE--EECSTTEEEEECC---EEEEEGGGEECCSC
T ss_pred             CceEEeecCccCC---cccccCCCEEEEe--eCCCCCceEEEcCCCCEeeccceEEeeCCC
Confidence            3678999999875   7999999999984  456778999995 78899999999987653

>3tvt_A Disks large 1 tumor suppressor protein; DLG, SRC-homology-3, guanylate kinase, phosphorylation-depen cell membrane; 1.60A {Drosophila melanogaster} PDB: 3uat_A*

Probab=97.42  E-value=9.4e-05  Score=68.33  Aligned_cols=52  Identities=25%  Similarity=0.492  Sum_probs=36.7

Q ss_pred             eeeeeeeecccCCCC-----CCCCCCCCEEEEeeeecCCCCeEEEEe---e---Cceeeecccce
Q psy7077         170 RRYRAIYEFVSRNGD-----ELSFQPGDIIMVPVKQNAEPGWLAGEL---R---GQTGWFPESYV  223 (336)
Q Consensus       170 ~~~~al~df~a~~~~-----eLs~~~Gdii~v~~~~~~~~gW~~g~~---~---g~~G~fP~~yv  223 (336)
                      ..++|+|||++..++     .|+|++||++.|.  ...+++||.++.   +   +..|++|+...
T Consensus         6 ~yvRa~fdY~~~~D~~~P~~gL~F~~gDiL~V~--~~~d~~wWqA~~v~~~~~~~~~GlIPS~~~   68 (292)
T 3tvt_A            6 LYVRALFDYDPNRDDGLPSRGLPFKHGDILHVT--NASDDEWWQARRVLGDNEDEQIGIVPSKRR   68 (292)
T ss_dssp             CEEEECSCBCC---------CCCBCTTCEEEEE--ECCSSSEEEECCCCC--------EEECHHH
T ss_pred             EEEEEeccCCCCCCCCCCCCcCCcCCCCEEEEe--ecCCCCeEEEEEeCCCCCccceeEEeChHH
Confidence            468899999987654     5999999999994  668899999974   2   34799999643

>3kfv_A Tight junction protein ZO-3; structural genomics consortium, SGC, cell junction, cell membrane, membrane, SH3 domain; 2.80A {Homo sapiens}

Probab=97.30  E-value=0.00012  Score=67.87  Aligned_cols=48  Identities=15%  Similarity=0.311  Sum_probs=39.0

Q ss_pred             EEEEecccCCCCCCCccccCCCEEEEEee-cCC---------ceecccCC------Cccccccc
Q psy7077         119 YYIAAYPYDSTEPGDLTFNQDEVIYVTKK-END---------WWTGTIGD------RTARFRGV  166 (336)
Q Consensus       119 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~---------Ww~g~~~~------~~g~~p~~  166 (336)
                      +.+|+|||+++.+++|+|++||++.|++. +++         ||.+..-+      ..|.+|..
T Consensus         6 yVRalfdy~~~~~~eL~F~kGDil~V~dt~~~~~~~~~~~~gwW~A~~~~~~~~~~~~G~IPs~   69 (308)
T 3kfv_A            6 YIRTHFELEPSPPSGLGFTRGDVFHVLDTLHPGPGQSHARGGHWLAVRMGRDLREQERGIIPNQ   69 (308)
T ss_dssp             EEEECSCBCCCSSSBCCBCTTCEEEEEEC-------------CEEEEEECTTSCEEEEEEECCH
T ss_pred             EEEEecCcCCCCcccCCCccCCEEEEccccCCCcccccccCceEEEEecCCCCCcCCCCeeech
Confidence            55699999999999999999999999998 554         99987632      45899875

>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}

Probab=97.27  E-value=0.00016  Score=74.86  Aligned_cols=48  Identities=25%  Similarity=0.509  Sum_probs=42.4

Q ss_pred             EEEEecccCCCCCCC-----ccccCCCEEEEEee-cCCceecccC------CCccccccc
Q psy7077         119 YYIAAYPYDSTEPGD-----LTFNQDEVIYVTKK-ENDWWTGTIG------DRTARFRGV  166 (336)
Q Consensus       119 ~~~al~dy~~~~~~e-----Ls~~~Gd~i~v~~~-~~~Ww~g~~~------~~~g~~p~~  166 (336)
                      +++|+|||++..+++     |+|++||++.|++. +.+||.++..      +..|++|++
T Consensus       429 ~vrAl~dy~~~~d~~~p~~~LsF~~GDil~v~~~~~~~WW~a~~~~~~~~~~~~G~iPs~  488 (721)
T 2xkx_A          429 YIRALFDYDKTKDCGFLSQALSFRFGDVLHVIDAGDEEWWQARRVHSDSETDDIGFIPSK  488 (721)
T ss_pred             eEEEeeccCcCCCCCCccccccccCCCEEEEeecCCCCeEEEEECCCCCccCccceeecH
Confidence            678999999999998     99999999999998 8999998764      345999975

>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A

Probab=97.26  E-value=0.00015  Score=69.65  Aligned_cols=48  Identities=21%  Similarity=0.346  Sum_probs=41.4

Q ss_pred             EEEEecccCCCCCCCccccCCCEEEEEee----cCCceecccCC------Cccccccc
Q psy7077         119 YYIAAYPYDSTEPGDLTFNQDEVIYVTKK----ENDWWTGTIGD------RTARFRGV  166 (336)
Q Consensus       119 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~----~~~Ww~g~~~~------~~g~~p~~  166 (336)
                      +++|+|||.+..+.+|+|++||++.|++.    +.+||.++..+      ..|++|++
T Consensus       108 ~vral~dy~~~~~~~Lsf~~Gdil~V~~~~~~~d~~wW~a~~~~~~~~~~~~G~IPs~  165 (391)
T 3tsz_A          108 YIRTHFEYEKESPYGLSFNKGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVERGIIPNK  165 (391)
T ss_dssp             EEEECSCBCCSSTTBCCBCTTCEEEEEESSGGGSSSEEEEEEECGGGCEEEEEEEECH
T ss_pred             ccccccccCCCCCCcceEccCCEEEEEeccCCCCCCeEEEEEeCCCCCcccCCEecCH
Confidence            66699999999999999999999999998    57899987643      36999976

>3tvt_A Disks large 1 tumor suppressor protein; DLG, SRC-homology-3, guanylate kinase, phosphorylation-depen cell membrane; 1.60A {Drosophila melanogaster} PDB: 3uat_A*

Probab=97.19  E-value=0.00024  Score=65.64  Aligned_cols=48  Identities=21%  Similarity=0.551  Sum_probs=35.5

Q ss_pred             EEEEecccCCCCCC-----CccccCCCEEEEEee-cCCceecccC------CCccccccc
Q psy7077         119 YYIAAYPYDSTEPG-----DLTFNQDEVIYVTKK-ENDWWTGTIG------DRTARFRGV  166 (336)
Q Consensus       119 ~~~al~dy~~~~~~-----eLs~~~Gd~i~v~~~-~~~Ww~g~~~------~~~g~~p~~  166 (336)
                      +.+|+|||.+..++     .|+|++||++.|++. +++||.++.-      ...|.+|+.
T Consensus         7 yvRa~fdY~~~~D~~~P~~gL~F~~gDiL~V~~~~d~~wWqA~~v~~~~~~~~~GlIPS~   66 (292)
T 3tvt_A            7 YVRALFDYDPNRDDGLPSRGLPFKHGDILHVTNASDDEWWQARRVLGDNEDEQIGIVPSK   66 (292)
T ss_dssp             EEEECSCBCC---------CCCBCTTCEEEEEECCSSSEEEECCCCC--------EEECH
T ss_pred             EEEEeccCCCCCCCCCCCCcCCcCCCCEEEEeecCCCCeEEEEEeCCCCCccceeEEeCh
Confidence            68899999998776     589999999999999 8999998741      236999975

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A

Probab=97.15  E-value=0.00027  Score=61.22  Aligned_cols=48  Identities=27%  Similarity=0.702  Sum_probs=44.9

Q ss_pred             EEEEecccCCCCCCCccccCCCEEEEEee-cCCceecccCCCccccccc
Q psy7077         119 YYIAAYPYDSTEPGDLTFNQDEVIYVTKK-ENDWWTGTIGDRTARFRGV  166 (336)
Q Consensus       119 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~Ww~g~~~~~~g~~p~~  166 (336)
                      .++|+|+|.++.+++|+|++||++.+.+. +.+||.+...|+.|++|..
T Consensus        16 ~~~al~d~~~~~~~el~~~~Gd~~~v~~~~~~~w~~~~~~g~~gl~p~~   64 (222)
T 3ehr_A           16 VFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIPSN   64 (222)
T ss_dssp             EEEESSCCCCSSTTBCCCCTTCEEEEEECCSSSEEEEEETTEEEEEEHH
T ss_pred             EEEEeCCcCCCCCCcccccCCCEEEEeccccchhHhcccCCcceeechh
Confidence            78999999999999999999999999988 9999999999999998864

>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}

Probab=96.87  E-value=0.00061  Score=66.81  Aligned_cols=48  Identities=21%  Similarity=0.349  Sum_probs=41.4

Q ss_pred             EEEEecccCCCCCCCccccCCCEEEEEee----cCCceecccC---C---Cccccccc
Q psy7077         119 YYIAAYPYDSTEPGDLTFNQDEVIYVTKK----ENDWWTGTIG---D---RTARFRGV  166 (336)
Q Consensus       119 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~----~~~Ww~g~~~---~---~~g~~p~~  166 (336)
                      +++|+|+|.+..+.+|+|++||++.|++.    +.+||.+..-   +   ..|++|++
T Consensus       100 yVralfdy~~~~~~~LsF~~GDIL~V~d~~~~~d~~wW~A~~~~~~~~~~~~GlIPs~  157 (468)
T 3shw_A          100 YIRTHFEYEKESPYGLSFNKGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVERGIIPNK  157 (468)
T ss_dssp             EEEECSCBCCSSTTBCCBCTTCEEEEEESSGGGCTTEEEEEEECTTSCEEEEEEEECH
T ss_pred             ccccccCcCCCCCCCceEccCCEEEEeecccCCCCCeEEEEEcCCCCcccccceecCH
Confidence            66799999999999999999999999997    5689998762   2   46999975

>3npf_A Putative dipeptidyl-peptidase VI; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: CSA GOL; 1.72A {Bacteroides ovatus} PDB: 3pvq_A

Probab=96.65  E-value=0.00062  Score=63.11  Aligned_cols=110  Identities=12%  Similarity=0.068  Sum_probs=64.8

Q ss_pred             CCCCCCCEEEEeeeecCCCCeEEEEe-eCceeeecccceeecCCCCCCCCCCCCCCCCccccccccCCCCcCCCCCCCcc
Q psy7077         186 LSFQPGDIIMVPVKQNAEPGWLAGEL-RGQTGWFPESYVEPCDETGEVVPGTELPGDKHHLELIAEVPENISDSGGSGIA  264 (336)
Q Consensus       186 Ls~~~Gdii~v~~~~~~~~gW~~g~~-~g~~G~fP~~yve~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~  264 (336)
                      -.+..|+.|.|++  + + ||++.+. +|..||++..++..++.......... .....+......+.....+...+   
T Consensus        35 ~~l~~G~~v~Vl~--~-~-gW~~V~~~dG~~GwV~~~~l~~~~~~~~~~~~~~-~~~vvt~~~~~vr~~p~~~~~~~---  106 (306)
T 3npf_A           35 TQALLGMPVKVLQ--Y-N-GWYEIQTPDDYTGWVHRMVITPMSKERYDEWNRA-EKIVVTSHYGFAYEKPDESSQPV---  106 (306)
T ss_dssp             EEEETTCEEEEEE--E-S-SEEEEECTTSCEEEEEGGGEEEECHHHHHHHHHS-CEEEECSSEEEEESSSSTTSCEE---
T ss_pred             EEEcCCCEEEEEE--E-C-CEEEEEcCCCCEEEEEhHHeeecChhhhhhhccC-CcEEEeecceeEEeCCCCCCceE---
Confidence            3467899999964  2 3 6999997 79999999999987652100000000 00000000000000000000000   


Q ss_pred             ccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEe-CCceeEeeCCCeeecC
Q psy7077         265 VEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGEL-RGQTGWFPESYVEPCD  317 (336)
Q Consensus       265 ~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~-~G~~G~fPsnyV~~i~  317 (336)
                                   ..+..|..+.|++.. ++|+..+. +|+.||+++.|++.++
T Consensus       107 -------------~~l~~Gt~v~v~~~~-~~W~kV~~pdG~~GyV~~~~l~~~~  146 (306)
T 3npf_A          107 -------------SDVVAGNRLKWEGSK-GHFYQVSYPDGRKAYLSKSISQPEA  146 (306)
T ss_dssp             -------------EEEETTCEEEEEEEE-TTEEEEECTTSCEEEEETTSEEEHH
T ss_pred             -------------EEEcCCCEEEEEeec-CCEEEEEcCCCCeEEEEeeccceee
Confidence                         227889999998765 56887776 8999999999998765

>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens}

Probab=96.47  E-value=0.0036  Score=57.40  Aligned_cols=43  Identities=12%  Similarity=0.010  Sum_probs=33.2

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEE-eCCceeEeeCCCeeecCCCC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGE-LRGQTGWFPESYVEPCDETG  320 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~-~~G~~G~fPsnyV~~i~~~~  320 (336)
                      +++.+||.++++...+..||..+ .+|..|++|++|+.+..+++
T Consensus       212 ~~~~kge~~~l~~~s~~~wW~v~~~~G~~g~vPs~~~~ip~p~~  255 (283)
T 3pe0_A          212 VTVHKGDECQLVGPAQPSHWKVLSSSGSEAAVPSVCFLVPPPNQ  255 (283)
T ss_dssp             CEECTTCEEEEEEECSTTEEEEECC---EEEEEGGGEECCSCCH
T ss_pred             ccccCCCEEEEeeCCCCCceEEEcCCCCEeeccceEEeeCCCCH
Confidence            44999999999999886666665 57899999999999877654

>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}

Probab=96.38  E-value=0.0026  Score=62.07  Aligned_cols=54  Identities=19%  Similarity=0.094  Sum_probs=46.5

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe-eCceeeecccceeecC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL-RGQTGWFPESYVEPCD  227 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~-~g~~G~fP~~yve~~~  227 (336)
                      ...++|+|||..   +++++.+||.+++  ....+..||.++. +|..|+||+.|+...+
T Consensus       283 ~~~V~alcdy~~---~e~~i~kge~~~L--~~ns~~~~W~V~~~~G~~~~vPavcf~ipp  337 (450)
T 3r6n_A          283 PIILRALCDYKQ---DQKIVHKGDECIL--KDNNERSKWYVTGPGGVDMLVPSVGLIIPP  337 (450)
T ss_dssp             CCEEEESSCEEE---TTEEECTTCEEEE--EECSSSSEEEEECSSSCCEEEEGGGEECCS
T ss_pred             CceEEEeccccC---CeeeEecCCEEEE--ecCCCCCceEEecCCCCeeccceeEEecCC
Confidence            467889999995   6899999999998  5667889999986 5899999999998765

>2krs_A Probable enterotoxin; all beta, SH3, ENTD, CPF_0587, CPE0606, structural genomics, PSI-2, protein structure initiative; NMR {Clostridium perfringens}

Probab=96.32  E-value=0.0052  Score=44.51  Aligned_cols=38  Identities=21%  Similarity=0.496  Sum_probs=33.3

Q ss_pred             CCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCC
Q psy7077         280 MGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  318 (336)
Q Consensus       280 f~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~  318 (336)
                      +.+|+.|.|+++. ++|+..+.+|+.||+.+.||+...+
T Consensus        27 l~~G~~v~v~~~~-~~W~kV~~~g~~GwV~~~yl~~~~~   64 (74)
T 2krs_A           27 LRNNDKVEIIKEV-DGWYEIRFNGKVGYASKSYITIVNE   64 (74)
T ss_dssp             EETTCEEEEEEEE-TTEEEEEETTEEEEECSSSEEESSS
T ss_pred             ECCCCEEEEEEEe-CCEEEEEECCeEEEEEhHHcCCCCC
Confidence            7889999999886 5799999999999999999987653

>2kq8_A Cell WALL hydrolase; GFT protein structure, NESG, PSI, SH3 domain, structural genomics, protein structure initiative; NMR {Bacillus thuringiensis serovarkonkukian}

Probab=96.26  E-value=0.002  Score=46.21  Aligned_cols=37  Identities=27%  Similarity=0.516  Sum_probs=32.9

Q ss_pred             CCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecC
Q psy7077         280 MGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD  317 (336)
Q Consensus       280 f~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~  317 (336)
                      +.+|+.|.|+++. ++|+..+.+|+.||+.+.||...+
T Consensus        28 l~~G~~v~v~~~~-~~W~~V~~~G~~GwV~~~~l~~~~   64 (70)
T 2kq8_A           28 LPQGQKVQVISEN-SGWSKINYNGQTGYIGTRYLSKLE   64 (70)
T ss_dssp             CCSSSSCCCCEEE-TTEEEEEETTEEEEEETTSCSCCC
T ss_pred             ECCCCEEEEEEec-CCEEEEEECCEEEEEEhHHccchh
Confidence            7889999999875 679988889999999999998765

>2kt8_A Probable surface protein; SH3 family, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Clostridium perfringens} PDB: 2kyb_A

Probab=96.07  E-value=0.0073  Score=44.01  Aligned_cols=38  Identities=16%  Similarity=0.363  Sum_probs=33.4

Q ss_pred             CCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCC
Q psy7077         280 MGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  318 (336)
Q Consensus       280 f~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~  318 (336)
                      +..|+.|.|+++. ++|+..+.+|+.||+.+.||+....
T Consensus        29 l~~G~~v~vl~~~-~~W~kV~~~g~~GwV~~~yl~~~~~   66 (76)
T 2kt8_A           29 LSGNTKVTIVGEE-GAFYKIEYKGSHGYVAKEYIKDIKD   66 (76)
T ss_dssp             ECTTCEEEEEEEE-TTEEEEEETTEEEEEEGGGEEEEEC
T ss_pred             ECCCCEEEEEEEe-CCEEEEEECCEEEEEEhHHhCcCCC
Confidence            7889999999875 5799898999999999999997654

>3h41_A NLP/P60 family protein; NLPC/P60 family protein, structural genomics, joint center F structural genomics, JCSG; HET: DGL PG4; 1.79A {Bacillus cereus atcc 10987}

Probab=94.83  E-value=0.022  Score=52.73  Aligned_cols=105  Identities=15%  Similarity=0.155  Sum_probs=62.6

Q ss_pred             CCCCCEEEEeeeecCCCCeEEEEe---------eCceeeecccceeecCCCCCCCCCCCCCCCCccccccccC--CCCcC
Q psy7077         188 FQPGDIIMVPVKQNAEPGWLAGEL---------RGQTGWFPESYVEPCDETGEVVPGTELPGDKHHLELIAEV--PENIS  256 (336)
Q Consensus       188 ~~~Gdii~v~~~~~~~~gW~~g~~---------~g~~G~fP~~yve~~~~~~~~~~~~~~~~~~~~~~~~a~~--~~~~~  256 (336)
                      +..|+.|.|++   .+++|.+++.         +|-.||+|+.++...++....  .   ..+  .....+..  -+...
T Consensus        64 ll~Ge~V~Vl~---~~~~W~~V~~~~q~~~~~~dGy~GWV~~~~L~~~~~~~~~--~---~~~--~~~Vt~~~~~l~~~p  133 (311)
T 3h41_A           64 ALLGQEVTVVD---KKGDWVKVLVHGQPTPRNEEGYPGWMPEKQLTYNQEFADK--T---NEP--FVLVTKPTAILYINP  133 (311)
T ss_dssp             EETTCEEEEEE---EETTEEEEEETTCCBTTBSSCEEEEEEGGGEECCHHHHHT--T---TSC--EEEECSSEEEEEESS
T ss_pred             ecCCCEEEEEE---eeCCEEEEEECCcccccCCCCcEEEEEHHHcCcccccccc--c---cCC--eEEEEeCceEEeccC
Confidence            45599999964   2578999985         688999999999752110000  0   000  00000000  00000


Q ss_pred             CCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEe-CCceeEeeCCCeeecCC
Q psy7077         257 DSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGEL-RGQTGWFPESYVEPCDE  318 (336)
Q Consensus       257 ~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~-~G~~G~fPsnyV~~i~~  318 (336)
                      +.+.               +-..+..|.++.|++.. ++|+.... +|+.||+++.++.....
T Consensus       134 ~~~~---------------~~~~l~~Gt~Lpv~~e~-~~w~~V~~p~G~~G~V~~~~l~~~~~  180 (311)
T 3h41_A          134 SEKH---------------KSLEVSYNTRLPLLSED-TISYRVLLPNGQKAWLRKNDGTFYRS  180 (311)
T ss_dssp             CTTC---------------CEEEEETTCEEEEEEEC-SSEEEEECTTSCEEEEEGGGEEEESC
T ss_pred             CCCC---------------ceEEEeCCCEEEEEeec-CCEEEEECCCCccceecccccccccc
Confidence            0000               00237889999998875 66777654 89999999999988754

>3npf_A Putative dipeptidyl-peptidase VI; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: CSA GOL; 1.72A {Bacteroides ovatus} PDB: 3pvq_A

Probab=94.03  E-value=0.071  Score=49.04  Aligned_cols=89  Identities=9%  Similarity=0.122  Sum_probs=61.0

Q ss_pred             cccCCCEEEEEeecCCceeccc-CCCccccccccc-------------ceeeeee----eeccc---CCCCCCCCCCCCE
Q psy7077         135 TFNQDEVIYVTKKENDWWTGTI-GDRTARFRGVSE-------------YRRYRAI----YEFVS---RNGDELSFQPGDI  193 (336)
Q Consensus       135 s~~~Gd~i~v~~~~~~Ww~g~~-~~~~g~~p~~~~-------------~~~~~al----~df~a---~~~~eLs~~~Gdi  193 (336)
                      .+..|+.+.|++.+ +|++.+. +|..||++...-             ....++.    .=+..   ....-..+..|..
T Consensus        36 ~l~~G~~v~Vl~~~-gW~~V~~~dG~~GwV~~~~l~~~~~~~~~~~~~~~~~vvt~~~~~vr~~p~~~~~~~~~l~~Gt~  114 (306)
T 3npf_A           36 QALLGMPVKVLQYN-GWYEIQTPDDYTGWVHRMVITPMSKERYDEWNRAEKIVVTSHYGFAYEKPDESSQPVSDVVAGNR  114 (306)
T ss_dssp             EEETTCEEEEEEES-SEEEEECTTSCEEEEEGGGEEEECHHHHHHHHHSCEEEECSSEEEEESSSSTTSCEEEEEETTCE
T ss_pred             EEcCCCEEEEEEEC-CEEEEEcCCCCEEEEEhHHeeecChhhhhhhccCCcEEEeecceeEEeCCCCCCceEEEEcCCCE
Confidence            57889999999885 6999988 688999876310             0111111    11111   1122356789999


Q ss_pred             EEEeeeecCCCCeEEEEe-eCceeeecccceeecC
Q psy7077         194 IMVPVKQNAEPGWLAGEL-RGQTGWFPESYVEPCD  227 (336)
Q Consensus       194 i~v~~~~~~~~gW~~g~~-~g~~G~fP~~yve~~~  227 (336)
                      +.+..   ...+|+..+. +|+.||++..++....
T Consensus       115 v~v~~---~~~~W~kV~~pdG~~GyV~~~~l~~~~  146 (306)
T 3npf_A          115 LKWEG---SKGHFYQVSYPDGRKAYLSKSISQPEA  146 (306)
T ss_dssp             EEEEE---EETTEEEEECTTSCEEEEETTSEEEHH
T ss_pred             EEEEe---ecCCEEEEEcCCCCeEEEEeeccceee
Confidence            98853   3578999986 8999999999998765

>2kt8_A Probable surface protein; SH3 family, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Clostridium perfringens} PDB: 2kyb_A

Probab=93.67  E-value=0.076  Score=38.46  Aligned_cols=39  Identities=15%  Similarity=0.367  Sum_probs=32.5

Q ss_pred             CCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCC
Q psy7077         187 SFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       187 s~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~  228 (336)
                      .+..|+.|.|+..   .++|++.+.+|..||+...||+....
T Consensus        28 ~l~~G~~v~vl~~---~~~W~kV~~~g~~GwV~~~yl~~~~~   66 (76)
T 2kt8_A           28 SLSGNTKVTIVGE---EGAFYKIEYKGSHGYVAKEYIKDIKD   66 (76)
T ss_dssp             EECTTCEEEEEEE---ETTEEEEEETTEEEEEEGGGEEEEEC
T ss_pred             EECCCCEEEEEEE---eCCEEEEEECCEEEEEEhHHhCcCCC
Confidence            4678999999642   46899999999999999999988664

>2krs_A Probable enterotoxin; all beta, SH3, ENTD, CPF_0587, CPE0606, structural genomics, PSI-2, protein structure initiative; NMR {Clostridium perfringens}

Probab=93.62  E-value=0.072  Score=38.32  Aligned_cols=39  Identities=21%  Similarity=0.504  Sum_probs=32.1

Q ss_pred             CCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCC
Q psy7077         187 SFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       187 s~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~  228 (336)
                      .+.+|+.+.|+..   .++|++.+.+|..||+...|++...+
T Consensus        26 ~l~~G~~v~v~~~---~~~W~kV~~~g~~GwV~~~yl~~~~~   64 (74)
T 2krs_A           26 TLRNNDKVEIIKE---VDGWYEIRFNGKVGYASKSYITIVNE   64 (74)
T ss_dssp             EEETTCEEEEEEE---ETTEEEEEETTEEEEECSSSEEESSS
T ss_pred             EECCCCEEEEEEE---eCCEEEEEECCeEEEEEhHHcCCCCC
Confidence            4678999999642   46899999999999999999987653

>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}

Probab=92.97  E-value=0.094  Score=51.06  Aligned_cols=42  Identities=17%  Similarity=-0.026  Sum_probs=35.2

Q ss_pred             CCCCCCEEEEEeecCCCeEEEEe-CCceeEeeCCCeeecCCCC
Q psy7077         279 IMGLGTVVPVKQNAEPGWLAGEL-RGQTGWFPESYVEPCDETG  320 (336)
Q Consensus       279 sf~~Gd~V~V~~~~~~~W~~g~~-~G~~G~fPsnyV~~i~~~~  320 (336)
                      ++.+||+++++...+..||..+. +|..|.||+.|+.+..+++
T Consensus       298 ~i~kge~~~L~~ns~~~~W~V~~~~G~~~~vPavcf~ipppd~  340 (450)
T 3r6n_A          298 IVHKGDECILKDNNERSKWYVTGPGGVDMLVPSVGLIIPPPNP  340 (450)
T ss_dssp             EECTTCEEEEEECSSSSEEEEECSSSCCEEEEGGGEECCSCCH
T ss_pred             eEecCCEEEEecCCCCCceEEecCCCCeeccceeEEecCCCCH
Confidence            38999999999999877777765 6899999999998776543

>2kq8_A Cell WALL hydrolase; GFT protein structure, NESG, PSI, SH3 domain, structural genomics, protein structure initiative; NMR {Bacillus thuringiensis serovarkonkukian}

Probab=92.84  E-value=0.046  Score=38.90  Aligned_cols=38  Identities=24%  Similarity=0.523  Sum_probs=31.6

Q ss_pred             CCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecC
Q psy7077         187 SFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD  227 (336)
Q Consensus       187 s~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~  227 (336)
                      .+.+|+.+.|+..   .++|++.+.+|..||+...|+...+
T Consensus        27 ~l~~G~~v~v~~~---~~~W~~V~~~G~~GwV~~~~l~~~~   64 (70)
T 2kq8_A           27 ALPQGQKVQVISE---NSGWSKINYNGQTGYIGTRYLSKLE   64 (70)
T ss_dssp             CCCSSSSCCCCEE---ETTEEEEEETTEEEEEETTSCSCCC
T ss_pred             EECCCCEEEEEEe---cCCEEEEEECCEEEEEEhHHccchh
Confidence            5778999888642   4689999999999999999997765

>3h41_A NLP/P60 family protein; NLPC/P60 family protein, structural genomics, joint center F structural genomics, JCSG; HET: DGL PG4; 1.79A {Bacillus cereus atcc 10987}

Probab=90.37  E-value=0.53  Score=43.33  Aligned_cols=89  Identities=12%  Similarity=0.065  Sum_probs=60.7

Q ss_pred             ccCCCEEEEEeecCCceeccc---------CCCcccccccc-----------cceeeee------eeecccCCCCCCCCC
Q psy7077         136 FNQDEVIYVTKKENDWWTGTI---------GDRTARFRGVS-----------EYRRYRA------IYEFVSRNGDELSFQ  189 (336)
Q Consensus       136 ~~~Gd~i~v~~~~~~Ww~g~~---------~~~~g~~p~~~-----------~~~~~~a------l~df~a~~~~eLs~~  189 (336)
                      +..|+.+.|++++++|.+++.         .|..||++...           .....++      +|.-.........+.
T Consensus        64 ll~Ge~V~Vl~~~~~W~~V~~~~q~~~~~~dGy~GWV~~~~L~~~~~~~~~~~~~~~~Vt~~~~~l~~~p~~~~~~~~l~  143 (311)
T 3h41_A           64 ALLGQEVTVVDKKGDWVKVLVHGQPTPRNEEGYPGWMPEKQLTYNQEFADKTNEPFVLVTKPTAILYINPSEKHKSLEVS  143 (311)
T ss_dssp             EETTCEEEEEEEETTEEEEEETTCCBTTBSSCEEEEEEGGGEECCHHHHHTTTSCEEEECSSEEEEEESSCTTCCEEEEE
T ss_pred             ecCCCEEEEEEeeCCEEEEEECCcccccCCCCcEEEEEHHHcCccccccccccCCeEEEEeCceEEeccCCCCCceEEEe
Confidence            456999999999999999975         57779987531           0111221      221111122237788


Q ss_pred             CCCEEEEeeeecCCCCeEEEEe-eCceeeecccceeecC
Q psy7077         190 PGDIIMVPVKQNAEPGWLAGEL-RGQTGWFPESYVEPCD  227 (336)
Q Consensus       190 ~Gdii~v~~~~~~~~gW~~g~~-~g~~G~fP~~yve~~~  227 (336)
                      .|.++.+..   ...+|+.... +|+.||++..++....
T Consensus       144 ~Gt~Lpv~~---e~~~w~~V~~p~G~~G~V~~~~l~~~~  179 (311)
T 3h41_A          144 YNTRLPLLS---EDTISYRVLLPNGQKAWLRKNDGTFYR  179 (311)
T ss_dssp             TTCEEEEEE---ECSSEEEEECTTSCEEEEEGGGEEEES
T ss_pred             CCCEEEEEe---ecCCEEEEECCCCccceeccccccccc
Confidence            999998853   3578998875 7889999999998765

>1wfw_A Kalirin-9A; SH3 domain, neuron-specific GDP/GTP exchange factor, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.34.2.1

Probab=86.11  E-value=1.5  Score=30.85  Aligned_cols=55  Identities=16%  Similarity=0.348  Sum_probs=41.1

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe--e----Cceeeecccceeec
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL--R----GQTGWFPESYVEPC  226 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~--~----g~~G~fP~~yve~~  226 (336)
                      ..+.+..||.+-.++|++...|++|.++.  ....+...+-.  +    ...||+|..-+-..
T Consensus         8 s~m~V~~dY~A~ke~eI~v~~ge~Vqila--~nqqnm~Lv~~~a~~q~paaegWvPG~vLg~~   68 (74)
T 1wfw_A            8 STMTVIKDYYALKENEICVSQGEVVQVLA--VNQQNMCLVYQPASDHSPAAEGWVPGSILAPF   68 (74)
T ss_dssp             CEEECCSCBCCCSSSCCCBCTTCEEEEEE--ECTTSEEEEEECSCSSSSSEEEEEEGGGCCBC
T ss_pred             ccEEEEeeeeeeccceeccccCcEEEEEE--ecCcceEEEEeecCCCCccccCcccccEeccc
Confidence            34667899999999999999999999964  35566665532  1    35799998775443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	336
d1uffa_	93	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	6e-19
d1uffa_	93	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	2e-05
d1k4us_	62	b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId	1e-18
d1k4us_	62	b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId	6e-08
d1k4us_	62	b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId	3e-07
d1awwa_	67	b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Hom	2e-18
d1awwa_	67	b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Hom	1e-05
d1sema_	58	b.34.2.1 (A:) Growth factor receptor-bound protein	3e-18
d1sema_	58	b.34.2.1 (A:) Growth factor receptor-bound protein	8e-09
d1sema_	58	b.34.2.1 (A:) Growth factor receptor-bound protein	2e-07
d1uhfa_	69	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	6e-18
d1uhfa_	69	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	1e-10
d1uhfa_	69	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	5e-06
d1opka1	57	b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domai	1e-17
d1opka1	57	b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domai	6e-06
d1utia_	57	b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona	2e-17
d1utia_	57	b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona	3e-07
d1oota_	58	b.34.2.1 (A:) Hypothetical protein YFR024c {Baker'	2e-17
d1oota_	58	b.34.2.1 (A:) Hypothetical protein YFR024c {Baker'	3e-05
d1ugva_	72	b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA062	3e-17
d1ugva_	72	b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA062	4e-05
d1ujya_	76	b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens	4e-17
d1ujya_	76	b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens	9e-07
d1uj0a_	58	b.34.2.1 (A:) Signal transducing adaptor molecule	6e-17
d1uj0a_	58	b.34.2.1 (A:) Signal transducing adaptor molecule	6e-07
d1uj0a_	58	b.34.2.1 (A:) Signal transducing adaptor molecule	6e-06
d1gcqa_	56	b.34.2.1 (A:) Growth factor receptor-bound protein	1e-16
d1gcqa_	56	b.34.2.1 (A:) Growth factor receptor-bound protein	1e-08
d1gcqa_	56	b.34.2.1 (A:) Growth factor receptor-bound protein	3e-07
d1u5sa1	71	b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [Tax	2e-16
d1u5sa1	71	b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [Tax	1e-05
d1gria1	56	b.34.2.1 (A:1-56) Growth factor receptor-bound pro	2e-16
d1gria1	56	b.34.2.1 (A:1-56) Growth factor receptor-bound pro	3e-06
d1uhca_	79	b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIA	2e-16
d1uhca_	79	b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIA	4e-05
d1efna_	57	b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase,	4e-16
d1efna_	57	b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase,	4e-04
d1j3ta_	74	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	8e-16
d1j3ta_	74	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	3e-07
d1j3ta_	74	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	1e-04
d1u06a1	55	b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chic	8e-16
d1u06a1	55	b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chic	5e-06
d1ng2a2	118	b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic	1e-15
d1ng2a2	118	b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic	3e-05
d1fmka1	64	b.34.2.1 (A:82-145) c-src protein tyrosine kinase	1e-15
d1fmka1	64	b.34.2.1 (A:82-145) c-src protein tyrosine kinase	8e-04
d1ycsb2	63	b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [	2e-15
d1ycsb2	63	b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [	3e-05
d1ckaa_	57	b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse	3e-15
d1ckaa_	57	b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse	5e-05
d1gl5a_	67	b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musc	5e-15
d1gl5a_	67	b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musc	1e-04
d1arka_	60	b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo	7e-15
d1arka_	60	b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo	7e-07
d1arka_	60	b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo	0.001
d1udla_	98	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	1e-14
d1udla_	98	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	1e-08
d1udla_	98	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	6e-06
d1qcfa1	65	b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Hu	1e-14
d1qcfa1	65	b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Hu	5e-04
d1ng2a1	58	b.34.2.1 (A:157-214) p47pox (neutrophil cytosolic	2e-14
d1ng2a1	58	b.34.2.1 (A:157-214) p47pox (neutrophil cytosolic	5e-05
d1ng2a1	58	b.34.2.1 (A:157-214) p47pox (neutrophil cytosolic	0.002
d1gcqc_	69	b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mu	4e-14
d1gcqc_	69	b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mu	3e-04
d1spka_	72	b.34.2.1 (A:) BAI1-associated protein 2-like 1 (RI	8e-14
d2hspa_	71	b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (	9e-14
d2hspa_	71	b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (	3e-07
d2hspa_	71	b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (	3e-04
d2iima1	62	b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 d	1e-13
d2iima1	62	b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 d	0.002
d1k9aa1	71	b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (cs	2e-13
d1k9aa1	71	b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (cs	4e-04
d1jo8a_	58	b.34.2.1 (A:) Actin binding protein ABP1 {Baker's	3e-13
d1jo8a_	58	b.34.2.1 (A:) Actin binding protein ABP1 {Baker's	6e-07
d1jo8a_	58	b.34.2.1 (A:) Actin binding protein ABP1 {Baker's	4e-04
d2v1ra1	67	b.34.2.1 (A:10-76) Peroxisomal membrane protein Pe	3e-13
d2v1ra1	67	b.34.2.1 (A:10-76) Peroxisomal membrane protein Pe	0.001
d1bb9a_	83	b.34.2.1 (A:) Amphiphysin 2 {Rat (Rattus norvegicu	4e-13
d1ue9a_	80	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	4e-13
d1wlpb1	53	b.34.2.1 (B:229-281) p47pox (neutrophil cytosolic	5e-13
d1wlpb1	53	b.34.2.1 (B:229-281) p47pox (neutrophil cytosolic	6e-06
d1phta_	83	b.34.2.1 (A:) Phosphatidylinositol 3-kinase (p85-a	1e-12
d1i07a_	59	b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus	2e-12
d1i07a_	59	b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus	1e-06
d1i07a_	59	b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus	0.004
d1wiea_	96	b.34.2.1 (A:) RIM binding protein 2, RIMBP2 {Human	4e-12
d1wiea_	96	b.34.2.1 (A:) RIM binding protein 2, RIMBP2 {Human	7e-04
d1zuua1	56	b.34.2.1 (A:2-57) BZZ1 {Baker's yeast (Saccharomyc	6e-12
d1zuua1	56	b.34.2.1 (A:2-57) BZZ1 {Baker's yeast (Saccharomyc	3e-04
d2rn8a1	53	b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus	4e-11
d2rn8a1	53	b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus	2e-04
d2rn8a1	53	b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus	0.004
d1wfwa_	74	b.34.2.1 (A:) Kalirin-9a {Mouse (Mus musculus) [Ta	3e-10
d1ug1a_	92	b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIA	4e-09
d1ug1a_	92	b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIA	1e-04
d1i1ja_	106	b.34.2.1 (A:) Melanoma inhibitory activity protein	8e-09
d1i1ja_	106	b.34.2.1 (A:) Melanoma inhibitory activity protein	0.002
d1kjwa1	96	b.34.2.1 (A:430-525) Psd-95 {Rat (Rattus norvegicu	2e-06
d1t0ha_	96	b.34.2.1 (A:) SH3-like domain of the L-type calciu	4e-06
d1vyva1	145	b.34.2.1 (A:71-215) SH3-like domain of the L-type	8e-04

>d1uffa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 93

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.2 bits (192), Expect = 6e-19
 Identities = 33/76 (43%), Positives = 40/76 (52%)

Query: 165 GVSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           G S    YRA+Y F +RN DE+SF  GDII V  K   EPGWL G  +G  GWFP +YVE
Sbjct: 1   GSSGSSGYRALYPFEARNHDEMSFNSGDIIQVDEKTVGEPGWLYGSFQGNFGWFPCNYVE 60

Query: 225 PCDETGEVVPGTELPG 240
               +      +    
Sbjct: 61  KMPSSENEKAVSPKKA 76

>d1uffa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 93

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (95), Expect = 2e-05
 Identities = 15/42 (35%), Positives = 19/42 (45%)

Query: 289 KQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVPGTELPG 330
           K   EPGWL G  +G  GWFP +YVE    +      +    
Sbjct: 35  KTVGEPGWLYGSFQGNFGWFPCNYVEKMPSSENEKAVSPKKA 76

>d1k4us_ b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId: 9606]} Length = 62

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p67phox
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.3 bits (188), Expect = 1e-18
 Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 2/61 (3%)

Query: 166 VSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
           + +  +  A++ + +   ++L FQ GDII+V  K      WL GE +G+ G FP+ +VE 
Sbjct: 2   LKKGSQVEALFSYEATQPEDLEFQEGDIILVLSKV--NEEWLEGESKGKVGIFPKVFVED 59

Query: 226 C 226
            
Sbjct: 60  S 60

>d1k4us_ b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId: 9606]} Length = 62

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p67phox
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.7 bits (111), Expect = 6e-08
 Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 1/52 (1%)

Query: 113 NMMSDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEND-WWTGTIGDRTARF 163
            +       A + Y++T+P DL F + ++I V  K N+ W  G    +   F
Sbjct: 1   QLKKGSQVEALFSYEATQPEDLEFQEGDIILVLSKVNEEWLEGESKGKVGIF 52

>d1k4us_ b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId: 9606]} Length = 62

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p67phox
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.7 bits (106), Expect = 3e-07
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPC 316
           G ++ V       WL GE +G+ G FP+ +VE  
Sbjct: 27  GDIILVLSKVNEEWLEGESKGKVGIFPKVFVEDS 60

>d1awwa_ b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 67

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.0 bits (187), Expect = 2e-18
 Identities = 17/63 (26%), Positives = 37/63 (58%), Gaps = 1/63 (1%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC 226
           SE ++  A+Y+++  N ++L  + GD   + ++++  P W A +  GQ G+ P +YV   
Sbjct: 6   SELKKVVALYDYMPMNANDLQLRKGDEYFI-LEESNLPWWRARDKNGQEGYIPSNYVTEA 64

Query: 227 DET 229
           +++
Sbjct: 65  EDS 67

>d1awwa_ b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 67

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (95), Expect = 1e-05
 Identities = 9/32 (28%), Positives = 19/32 (59%)

Query: 288 VKQNAEPGWLAGELRGQTGWFPESYVEPCDET 319
           ++++  P W A +  GQ G+ P +YV   +++
Sbjct: 36  LEESNLPWWRARDKNGQEGYIPSNYVTEAEDS 67

>d1sema_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Caenorhabditis elegans, SEM-5 [TaxId: 6239]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Caenorhabditis elegans, SEM-5 [TaxId: 6239]

 Score = 75.1 bits (185), Expect = 3e-18
 Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 2/60 (3%)

Query: 168 EYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD 227
           E +  +A+++F  +   EL+F+ GD+I +  K   +P W  G+L  + G FP +YV P +
Sbjct: 1   ETKFVQALFDFNPQESGELAFKRGDVITLINKD--DPNWWEGQLNNRRGIFPSNYVCPYN 58

>d1sema_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Caenorhabditis elegans, SEM-5 [TaxId: 6239]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Caenorhabditis elegans, SEM-5 [TaxId: 6239]

 Score = 48.9 bits (117), Expect = 8e-09
 Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%)

Query: 118 KYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEND-WWTGTIGDRTARF 163
           K+  A + ++  E G+L F + +VI +  K++  WW G + +R   F
Sbjct: 3   KFVQALFDFNPQESGELAFKRGDVITLINKDDPNWWEGQLNNRRGIF 49

>d1sema_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Caenorhabditis elegans, SEM-5 [TaxId: 6239]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Caenorhabditis elegans, SEM-5 [TaxId: 6239]

 Score = 45.4 bits (108), Expect = 2e-07
 Identities = 12/35 (34%), Positives = 19/35 (54%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD 317
           G V+ +    +P W  G+L  + G FP +YV P +
Sbjct: 24  GDVITLINKDDPNWWEGQLNNRRGIFPSNYVCPYN 58

>d1uhfa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 69

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.8 bits (184), Expect = 6e-18
 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%)

Query: 165 GVSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           G S    Y A+Y + S    +L+F  G+ I+V  K   +  W  G +  ++G FP +YV+
Sbjct: 4   GSSGGEEYIALYPYSSVEPGDLTFTEGEEILVTQK---DGEWWTGSIGDRSGIFPSNYVK 60

Query: 225 PCD 227
           P D
Sbjct: 61  PKD 63

>d1uhfa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 69

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.8 bits (132), Expect = 1e-10
 Identities = 28/46 (60%), Positives = 35/46 (76%)

Query: 118 KYYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGTIGDRTARF 163
           + YIA YPY S EPGDLTF + E I VT+K+ +WWTG+IGDR+  F
Sbjct: 9   EEYIALYPYSSVEPGDLTFTEGEEILVTQKDGEWWTGSIGDRSGIF 54

>d1uhfa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 69

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.7 bits (98), Expect = 5e-06
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query: 293 EPGWLAGELRGQTGWFPESYVEPCD 317
           +  W  G +  ++G FP +YV+P D
Sbjct: 39  DGEWWTGSIGDRSGIFPSNYVKPKD 63

>d1opka1 b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 57

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Abl tyrosine kinase, SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 73.2 bits (180), Expect = 1e-17
 Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD 227
           + A+Y+FV+   + LS   G+ + V    +    W   + +   GW P +Y+ P +
Sbjct: 3   FVALYDFVASGDNTLSITKGEKLRVLGYNHNG-EWCEAQTKNGQGWVPSNYITPVN 57

>d1opka1 b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 57

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Abl tyrosine kinase, SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.9 bits (96), Expect = 6e-06
 Identities = 7/29 (24%), Positives = 12/29 (41%)

Query: 289 KQNAEPGWLAGELRGQTGWFPESYVEPCD 317
             N    W   + +   GW P +Y+ P +
Sbjct: 29  GYNHNGEWCEAQTKNGQGWVPSNYITPVN 57

>d1utia_ b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona/Gads) {Mouse (Mus musculus) [TaxId: 10090]} Length = 57

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Grb2-related adaptor protein 2 (Mona/Gads)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 72.8 bits (179), Expect = 2e-17
 Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC 226
           R  RA+Y+F +   DEL F+ G+++ V    N  P W  G L  + G FP +YV P 
Sbjct: 2   RWARALYDFEALEEDELGFRSGEVVEVLDSSN--PSWWTGRLHNKLGLFPANYVAPM 56

>d1utia_ b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona/Gads) {Mouse (Mus musculus) [TaxId: 10090]} Length = 57

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Grb2-related adaptor protein 2 (Mona/Gads)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.3 bits (105), Expect = 3e-07
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPC 316
           G VV V  ++ P W  G L  + G FP +YV P 
Sbjct: 23  GEVVEVLDSSNPSWWTGRLHNKLGLFPANYVAPM 56

>d1oota_ b.34.2.1 (A:) Hypothetical protein YFR024c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein YFR024c
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 72.9 bits (179), Expect = 2e-17
 Identities = 18/54 (33%), Positives = 30/54 (55%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           +  A+Y F      +L F+ GD+I +  K +++  W  G + G+ G FP +YVE
Sbjct: 3   KAVALYSFAGEESGDLPFRKGDVITILKKSDSQNDWWTGRVNGREGIFPANYVE 56

>d1oota_ b.34.2.1 (A:) Hypothetical protein YFR024c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein YFR024c
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.0 bits (91), Expect = 3e-05
 Identities = 10/30 (33%), Positives = 17/30 (56%)

Query: 285 VVPVKQNAEPGWLAGELRGQTGWFPESYVE 314
            +  K +++  W  G + G+ G FP +YVE
Sbjct: 27  TILKKSDSQNDWWTGRVNGREGIFPANYVE 56

>d1ugva_ b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA0621) {Human (Homo sapiens) [TaxId: 9606]} Length = 72

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Olygophrenin-1 like protein (KIAA0621)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.0 bits (179), Expect = 3e-17
 Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 1/62 (1%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC 226
           + +R+ +A+Y   + +  ELSF  G +           GWL G L G+TG  PE+YVE  
Sbjct: 8   TPFRKAKALYACKAEHDSELSFTAGTVFDNVHPSQEP-GWLEGTLNGKTGLIPENYVEFL 66

Query: 227 DE 228
             
Sbjct: 67  SG 68

>d1ugva_ b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA0621) {Human (Homo sapiens) [TaxId: 9606]} Length = 72

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Olygophrenin-1 like protein (KIAA0621)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.1 bits (91), Expect = 4e-05
 Identities = 16/35 (45%), Positives = 19/35 (54%)

Query: 284 TVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE 318
               V  + EPGWL G L G+TG  PE+YVE    
Sbjct: 34  VFDNVHPSQEPGWLEGTLNGKTGLIPENYVEFLSG 68

>d1ujya_ b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId: 9606]} Length = 76

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Rac/CDC42 GEF 6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.0 bits (179), Expect = 4e-17
 Identities = 26/70 (37%), Positives = 33/70 (47%), Gaps = 2/70 (2%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC 226
           S     +A + F   N DELS   GDII V   +    GW  G L G+TGWFP +YV   
Sbjct: 8   SHQLIVKARFNFKQTNEDELSVCKGDIIYVTRVEE--GGWWEGTLNGRTGWFPSNYVREI 65

Query: 227 DETGEVVPGT 236
             +    P +
Sbjct: 66  KSSERSGPSS 75

>d1ujya_ b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId: 9606]} Length = 76

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Rac/CDC42 GEF 6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.7 bits (103), Expect = 9e-07
 Identities = 16/44 (36%), Positives = 23/44 (52%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVPGT 326
           G ++ V +  E GW  G L G+TGWFP +YV     +    P +
Sbjct: 32  GDIIYVTRVEEGGWWEGTLNGRTGWFPSNYVREIKSSERSGPSS 75

>d1uj0a_ b.34.2.1 (A:) Signal transducing adaptor molecule Stam2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Signal transducing adaptor molecule Stam2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 71.6 bits (176), Expect = 6e-17
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 2/55 (3%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
           RR RA+Y+F +   +EL+F+ G++I V      +  W  GE    TG FP ++V 
Sbjct: 3   RRVRALYDFEAVEDNELTFKHGELITVLDDS--DANWWQGENHRGTGLFPSNFVT 55

>d1uj0a_ b.34.2.1 (A:) Signal transducing adaptor molecule Stam2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Signal transducing adaptor molecule Stam2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.9 bits (104), Expect = 6e-07
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 1/47 (2%)

Query: 118 KYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEND-WWTGTIGDRTARF 163
           +   A Y +++ E  +LTF   E+I V    +  WW G     T  F
Sbjct: 3   RRVRALYDFEAVEDNELTFKHGELITVLDDSDANWWQGENHRGTGLF 49

>d1uj0a_ b.34.2.1 (A:) Signal transducing adaptor molecule Stam2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Signal transducing adaptor molecule Stam2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.8 bits (96), Expect = 6e-06
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVE 314
           G ++ V  +++  W  GE    TG FP ++V 
Sbjct: 24  GELITVLDDSDANWWQGENHRGTGLFPSNFVT 55

>d1gcqa_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]} Length = 56

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.3 bits (175), Expect = 1e-16
 Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 2/53 (3%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
           +A+++F  +   EL F+ GD I V      +P W  G   GQTG FP +YV P
Sbjct: 5   QALFDFDPQEDGELGFRRGDFIHVMDNS--DPNWWKGACHGQTGMFPRNYVTP 55

>d1gcqa_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]} Length = 56

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.1 bits (115), Expect = 1e-08
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 119 YYIAAYPYDSTEPGDLTFNQDEVIYVTKKEND-WWTGTIGDRTARF 163
           Y  A + +D  E G+L F + + I+V    +  WW G    +T  F
Sbjct: 3   YVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGACHGQTGMF 48

>d1gcqa_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]} Length = 56

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.7 bits (106), Expect = 3e-07
 Identities = 15/33 (45%), Positives = 19/33 (57%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEP 315
           G  + V  N++P W  G   GQTG FP +YV P
Sbjct: 23  GDFIHVMDNSDPNWWKGACHGQTGMFPRNYVTP 55

>d1u5sa1 b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 71

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Nck-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.6 bits (173), Expect = 2e-16
 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 1/67 (1%)

Query: 164 RGVSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGW-LAGELRGQTGWFPESY 222
           +G       + +Y F S   +EL+F+ G+ + V  K   +P W      RGQ G  P++Y
Sbjct: 1   QGSRVLHVVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNY 60

Query: 223 VEPCDET 229
           V    + 
Sbjct: 61  VVVLSDG 67

>d1u5sa1 b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 71

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Nck-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (94), Expect = 1e-05
 Identities = 10/36 (27%), Positives = 15/36 (41%)

Query: 284 TVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET 319
            V+   +N    W     RGQ G  P++YV    + 
Sbjct: 32  EVIEKPENDPEWWKCKNARGQVGLVPKNYVVVLSDG 67

>d1gria1 b.34.2.1 (A:1-56) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]} Length = 56

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.1 bits (172), Expect = 2e-16
 Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
            A Y+F +   DELSF+ GDI+ V + +  +  W   EL G+ G+ P++Y+E
Sbjct: 4   IAKYDFKATADDELSFKRGDILKV-LNEECDQNWYKAELNGKDGFIPKNYIE 54

>d1gria1 b.34.2.1 (A:1-56) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]} Length = 56

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.6 bits (98), Expect = 3e-06
 Identities = 8/30 (26%), Positives = 17/30 (56%)

Query: 285 VVPVKQNAEPGWLAGELRGQTGWFPESYVE 314
           +  + +  +  W   EL G+ G+ P++Y+E
Sbjct: 25  LKVLNEECDQNWYKAELNGKDGFIPKNYIE 54

>d1uhca_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010) {Human (Homo sapiens) [TaxId: 9606]} Length = 79

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein Baa76854.1 (KIAA1010)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.7 bits (173), Expect = 2e-16
 Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 2/60 (3%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMV--PVKQNAEPGWLAGELRGQTGWFPESYVEPCD 227
           + Y A+Y F +RN +ELS      + +           W   E+ G+ G+ P +Y+   +
Sbjct: 14  QVYFAVYTFKARNPNELSVSANQKLKILEFKDVTGNTEWWLAEVNGKKGYVPSNYIRKTE 73

>d1uhca_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010) {Human (Homo sapiens) [TaxId: 9606]} Length = 79

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein Baa76854.1 (KIAA1010)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.1 bits (91), Expect = 4e-05
 Identities = 6/25 (24%), Positives = 12/25 (48%)

Query: 293 EPGWLAGELRGQTGWFPESYVEPCD 317
              W   E+ G+ G+ P +Y+   +
Sbjct: 49  NTEWWLAEVNGKKGYVPSNYIRKTE 73

>d1efna_ b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]} Length = 57

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Fyn proto-oncogene tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.4 bits (170), Expect = 4e-16
 Identities = 14/54 (25%), Positives = 26/54 (48%)

Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
           + A+Y++ +   D+LSF  G+   +      +         G+TG+ P +YV P
Sbjct: 3   FVALYDYEAITEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYVAP 56

>d1efna_ b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]} Length = 57

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Fyn proto-oncogene tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.9 bits (83), Expect = 4e-04
 Identities = 7/27 (25%), Positives = 11/27 (40%)

Query: 289 KQNAEPGWLAGELRGQTGWFPESYVEP 315
               +         G+TG+ P +YV P
Sbjct: 30  SSEGDWWEARSLTTGETGYIPSNYVAP 56

>d1j3ta_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 74

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.1 bits (169), Expect = 8e-16
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 3/63 (4%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC 226
            E  + +A+  + ++  + L+F   DII V      +  W  GE+ G  GWFP+SYV+  
Sbjct: 8   VENLKAQALCSWTAKKDNHLNFSKHDIITV---LEQQENWWFGEVHGGRGWFPKSYVKII 64

Query: 227 DET 229
             +
Sbjct: 65  PGS 67

>d1j3ta_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 74

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.2 bits (107), Expect = 3e-07
 Identities = 9/45 (20%), Positives = 21/45 (46%)

Query: 119 YYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTGTIGDRTARF 163
              A   + + +   L F++ ++I V +++ +WW G +      F
Sbjct: 12  KAQALCSWTAKKDNHLNFSKHDIITVLEQQENWWFGEVHGGRGWF 56

>d1j3ta_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 74

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.9 bits (88), Expect = 1e-04
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 293 EPGWLAGELRGQTGWFPESYVEPCDET 319
           +  W  GE+ G  GWFP+SYV+    +
Sbjct: 41  QENWWFGEVHGGRGWFPKSYVKIIPGS 67

>d1u06a1 b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 55

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: alpha-Spectrin, SH3 domain
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 68.6 bits (168), Expect = 8e-16
 Identities = 13/54 (24%), Positives = 28/54 (51%), Gaps = 2/54 (3%)

Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
             A+Y++  ++  E++ + GDI+ +    N    W   E+  + G+ P +YV+ 
Sbjct: 3   VLALYDYQEKSPREVTMKKGDILTLLNSTN--KDWWKVEVNDRQGFVPAAYVKK 54

>d1u06a1 b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 55

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: alpha-Spectrin, SH3 domain
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 41.2 bits (97), Expect = 5e-06
 Identities = 7/33 (21%), Positives = 16/33 (48%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEP 315
           G ++ +  +    W   E+  + G+ P +YV+ 
Sbjct: 22  GDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKK 54

>d1ng2a2 b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 118

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.1 bits (171), Expect = 1e-15
 Identities = 18/71 (25%), Positives = 27/71 (38%), Gaps = 2/71 (2%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET 229
             Y AI  + +  GDE+S   G+ + V  K     GW        TG+FP  Y++   + 
Sbjct: 15  EPYVAIKAYTAVEGDEVSLLEGEAVEVIHKLL--DGWWVIRKDDVTGYFPSMYLQKSGQD 72

Query: 230 GEVVPGTELPG 240
                     G
Sbjct: 73  VSQAQRQIKRG 83

>d1ng2a2 b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 118

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.4 bits (94), Expect = 3e-05
 Identities = 11/48 (22%), Positives = 15/48 (31%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVPGTELPG 330
           G  V V      GW        TG+FP  Y++   +           G
Sbjct: 36  GEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQKSGQDVSQAQRQIKRG 83

>d1fmka1 b.34.2.1 (A:82-145) c-src protein tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 64

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: c-src protein tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.3 bits (167), Expect = 1e-15
 Identities = 17/57 (29%), Positives = 29/57 (50%)

Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE 228
           + A+Y++ SR   +LSF+ G+ + +      +         GQTG+ P +YV P D 
Sbjct: 5   FVALYDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSDS 61

>d1fmka1 b.34.2.1 (A:82-145) c-src protein tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 64

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: c-src protein tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.1 bits (81), Expect = 8e-04
 Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 2/38 (5%)

Query: 283 GTVVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPCDE 318
           G  + +  N E  W        GQTG+ P +YV P D 
Sbjct: 24  GERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSDS 61

>d1ycsb2 b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 63

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.9 bits (166), Expect = 2e-15
 Identities = 12/61 (19%), Positives = 28/61 (45%), Gaps = 1/61 (1%)

Query: 166 VSEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNA-EPGWLAGELRGQTGWFPESYVE 224
           +       A++++  +N DEL  + GD + +  +++  E  W    L  + G+ P + + 
Sbjct: 1   IMNKGVIYALWDYEPQNDDELPMKEGDCMTIIHREDEDEIEWWWARLNDKEGYVPRNLLG 60

Query: 225 P 225
            
Sbjct: 61  L 61

>d1ycsb2 b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 63

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.0 bits (91), Expect = 3e-05
 Identities = 6/32 (18%), Positives = 13/32 (40%)

Query: 284 TVVPVKQNAEPGWLAGELRGQTGWFPESYVEP 315
           T++  +   E  W    L  + G+ P + +  
Sbjct: 30  TIIHREDEDEIEWWWARLNDKEGYVPRNLLGL 61

>d1ckaa_ b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 57

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: C-Crk, N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 67.0 bits (164), Expect = 3e-15
 Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 3/59 (5%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
           +EY   RA+++F   + ++L F+ GDI+ +  K   +  W A +  G+ G  P  YVE 
Sbjct: 1   AEY--VRALFDFNGNDEEDLPFKKGDILRIRDKPEEQ-WWNAEDSEGKRGMIPVPYVEK 56

>d1ckaa_ b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 57

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: C-Crk, N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.1 bits (89), Expect = 5e-05
 Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 1/34 (2%)

Query: 283 GTVVPVKQNAEPGWLAGE-LRGQTGWFPESYVEP 315
           G ++ ++   E  W   E   G+ G  P  YVE 
Sbjct: 23  GDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEK 56

>d1gl5a_ b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musculus) [TaxId: 10090]} Length = 67

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: tyrosine kinase tec
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 66.7 bits (163), Expect = 5e-15
 Identities = 13/59 (22%), Positives = 26/59 (44%), Gaps = 1/59 (1%)

Query: 172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETG 230
             A+Y+F +    +L  + G   ++ +++N    W A +  G  G+ P +YV       
Sbjct: 5   VVAMYDFQATEAHDLRLERGQEYII-LEKNDLHWWRARDKYGSEGYIPSNYVTGKKSNN 62

>d1gl5a_ b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musculus) [TaxId: 10090]} Length = 67

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: tyrosine kinase tec
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.5 bits (87), Expect = 1e-04
 Identities = 8/33 (24%), Positives = 14/33 (42%)

Query: 288 VKQNAEPGWLAGELRGQTGWFPESYVEPCDETG 320
           +++N    W A +  G  G+ P +YV       
Sbjct: 30  LEKNDLHWWRARDKYGSEGYIPSNYVTGKKSNN 62

>d1arka_ b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo sapiens) [TaxId: 9606]} Length = 60

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3 domain from nebulin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.3 bits (162), Expect = 7e-15
 Identities = 20/58 (34%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR--GQTGWFPESYVEP 225
           + +RA+Y++++ + DE+SF+ GD I+       + GW+ G ++  G+TG  P +YVE 
Sbjct: 4   KIFRAMYDYMAADADEVSFKDGDAIINVQAI--DEGWMYGTVQRTGRTGMLPANYVEA 59

>d1arka_ b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo sapiens) [TaxId: 9606]} Length = 60

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3 domain from nebulin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.6 bits (103), Expect = 7e-07
 Identities = 7/35 (20%), Positives = 17/35 (48%)

Query: 118 KYYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWW 152
           K + A Y Y + +  +++F   + I   +  ++ W
Sbjct: 4   KIFRAMYDYMAADADEVSFKDGDAIINVQAIDEGW 38

>d1arka_ b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo sapiens) [TaxId: 9606]} Length = 60

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3 domain from nebulin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (80), Expect = 0.001
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 2/35 (5%)

Query: 283 GTVVPVKQNAEPGWLAGELR--GQTGWFPESYVEP 315
           G  +   Q  + GW+ G ++  G+TG  P +YVE 
Sbjct: 25  GDAIINVQAIDEGWMYGTVQRTGRTGMLPANYVEA 59

>d1udla_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 98

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.9 bits (163), Expect = 1e-14
 Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 2/63 (3%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC 226
               +  A+Y++ + N DELSF  G +I V  K +  P W  GE+ G TG FP +YV+  
Sbjct: 32  HPVCQVIAMYDYAANNEDELSFSKGQLINVMNKDD--PDWWQGEINGVTGLFPSNYVKMT 89

Query: 227 DET 229
            ++
Sbjct: 90  TDS 92

>d1udla_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 98

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.5 bits (118), Expect = 1e-08
 Identities = 24/108 (22%), Positives = 45/108 (41%), Gaps = 21/108 (19%)

Query: 212 RGQTGWFPESYVEPCDETGEVVPGTELPGDKHHLELIAEVPENISDSGGSGIAVEEGPGI 271
            GQ GWFP S+V+    + E       P  +    +IA      ++     ++  +G   
Sbjct: 6   SGQKGWFPASHVKLLGPSSERATPAFHPVCQ----VIAMYDYAANNEDE--LSFSKG--- 56

Query: 272 PADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET 319
              +         +  + ++ +P W  GE+ G TG FP +YV+   ++
Sbjct: 57  --QL---------INVMNKD-DPDWWQGEINGVTGLFPSNYVKMTTDS 92

>d1udla_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 98

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.2 bits (99), Expect = 6e-06
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 118 KYYIAAYPYDSTEPGDLTFNQDEVIYVTKKEND-WWTGTIGDRTARF 163
              IA Y Y +    +L+F++ ++I V  K++  WW G I   T  F
Sbjct: 35  CQVIAMYDYAANNEDELSFSKGQLINVMNKDDPDWWQGEINGVTGLF 81

>d1qcfa1 b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]} Length = 65

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hemapoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.6 bits (160), Expect = 1e-14
 Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD 227
               A+Y++ + + ++LSFQ GD ++V ++++ E          + G+ P +YV   D
Sbjct: 5   IIVVALYDYEAIHHEDLSFQKGDQMVV-LEESGEWWKARSLATRKEGYIPSNYVARVD 61

>d1qcfa1 b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]} Length = 65

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hemapoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.9 bits (83), Expect = 5e-04
 Identities = 6/30 (20%), Positives = 13/30 (43%)

Query: 288 VKQNAEPGWLAGELRGQTGWFPESYVEPCD 317
           ++++ E          + G+ P +YV   D
Sbjct: 32  LEESGEWWKARSLATRKEGYIPSNYVARVD 61

>d1ng2a1 b.34.2.1 (A:157-214) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.9 bits (158), Expect = 2e-14
 Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 2/57 (3%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD 227
            YRAI ++   +G E++   GD++ V  K   E GW   +++ + GW P S++EP D
Sbjct: 4   TYRAIADYEKTSGSEMALSTGDVVEVVEKS--ESGWWFCQMKAKRGWIPASFLEPLD 58

>d1ng2a1 b.34.2.1 (A:157-214) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.3 bits (89), Expect = 5e-05
 Identities = 9/46 (19%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 119 YYIAAYPYDSTEPGDLTFNQDEVIYVTKKEND-WWTGTIGDRTARF 163
            Y A   Y+ T   ++  +  +V+ V +K    WW   +  +    
Sbjct: 4   TYRAIADYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWI 49

>d1ng2a1 b.34.2.1 (A:157-214) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.1 bits (78), Expect = 0.002
 Identities = 14/35 (40%), Positives = 22/35 (62%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD 317
           G VV V + +E GW   +++ + GW P S++EP D
Sbjct: 24  GDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLD 58

>d1gcqc_ b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 69

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Vav N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 64.1 bits (156), Expect = 4e-14
 Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 3/58 (5%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR--GQTGWFPESYVEP 225
           + Y  I       G  L   PGDI+ +  K  AE  W  G      + GWFP + V P
Sbjct: 11  QEYYGIPPPPGAFGPFLRLNPGDIVEL-TKAEAEHNWWEGRNTATNEVGWFPCNRVHP 67

>d1gcqc_ b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 69

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Vav N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.4 bits (84), Expect = 3e-04
 Identities = 11/30 (36%), Positives = 13/30 (43%), Gaps = 2/30 (6%)

Query: 288 VKQNAEPGWLAGELR--GQTGWFPESYVEP 315
            K  AE  W  G      + GWFP + V P
Sbjct: 38  TKAEAEHNWWEGRNTATNEVGWFPCNRVHP 67

>d1spka_ b.34.2.1 (A:) BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19) {Mouse (Mus musculus) [TaxId: 10090]} Length = 72

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 63.7 bits (155), Expect = 8e-14
 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 4/65 (6%)

Query: 167 SEYRRYRAIYEFV-SRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR--GQTGWFPESYV 223
           S  ++ + I+      N   LSF  GD++ + + +  + GWL GE       GWFP SY 
Sbjct: 5   SSGQKVKTIFPHTAGNNKTLLSFAQGDVLTLLIPEEKD-GWLYGEHDTTKARGWFPSSYT 63

Query: 224 EPCDE 228
           +    
Sbjct: 64  KLLSG 68

>d2hspa_ b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (Homo sapiens) [TaxId: 9606]} Length = 71

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phospholipase C, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.3 bits (154), Expect = 9e-14
 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 3/60 (5%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQT-GWFPESYVEPCDET 229
             +A++++ ++  DEL+F    II    KQ  E GW  G+  G+   WFP +YVE     
Sbjct: 8   AVKALFDYKAQREDELTFIKSAIIQNVEKQ--EGGWWRGDYGGKKQLWFPSNYVEEMVNP 65

>d2hspa_ b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (Homo sapiens) [TaxId: 9606]} Length = 71

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phospholipase C, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.2 bits (107), Expect = 3e-07
 Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 119 YYIAAYPYDSTEPGDLTFNQDEVIYVTKKEND-WWTGTIGDRT 160
              A + Y +    +LTF +  +I   +K+   WW G  G + 
Sbjct: 8   AVKALFDYKAQREDELTFIKSAIIQNVEKQEGGWWRGDYGGKK 50

>d2hspa_ b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (Homo sapiens) [TaxId: 9606]} Length = 71

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phospholipase C, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (85), Expect = 3e-04
 Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 1/38 (2%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQT-GWFPESYVEPCDET 319
             ++   +  E GW  G+  G+   WFP +YVE     
Sbjct: 28  SAIIQNVEKQEGGWWRGDYGGKKQLWFPSNYVEEMVNP 65

>d2iima1 b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]} Length = 62

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p56-lck tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.9 bits (153), Expect = 1e-13
 Identities = 11/56 (19%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP 225
               A++ +   +  +L F+ G+ + + ++Q+ E         GQ G+ P ++V  
Sbjct: 7   NLVIALHSYEPSHDGDLGFEKGEQLRI-LEQSGEWWKAQSLTTGQEGFIPFNFVAK 61

>d2iima1 b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]} Length = 62

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p56-lck tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.0 bits (78), Expect = 0.002
 Identities = 7/31 (22%), Positives = 14/31 (45%)

Query: 285 VVPVKQNAEPGWLAGELRGQTGWFPESYVEP 315
           +  ++Q+ E         GQ G+ P ++V  
Sbjct: 31  LRILEQSGEWWKAQSLTTGQEGFIPFNFVAK 61

>d1k9aa1 b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 71

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.6 bits (152), Expect = 2e-13
 Identities = 13/59 (22%), Positives = 22/59 (37%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE 228
               A Y F      +L F  GD++ +         + A    G+ G  P +YV+  + 
Sbjct: 7   TECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKREG 65

>d1k9aa1 b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 71

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.0 bits (83), Expect = 4e-04
 Identities = 8/36 (22%), Positives = 16/36 (44%), Gaps = 1/36 (2%)

Query: 284 TVVPVKQNAEPGWLAGELR-GQTGWFPESYVEPCDE 318
            +  V    +P W   + + G+ G  P +YV+  + 
Sbjct: 30  VLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKREG 65

>d1jo8a_ b.34.2.1 (A:) Actin binding protein ABP1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Actin binding protein ABP1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 61.3 bits (149), Expect = 3e-13
 Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 4/57 (7%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR--GQTGWFPESYVEPCD 227
            A Y++ +   +EL+F   D I+       +  W  GEL   G  G FP +YV   +
Sbjct: 4   TAEYDYDAAEDNELTFVENDKIINIEFV--DDDWWLGELEKDGSKGLFPSNYVSLGN 58

>d1jo8a_ b.34.2.1 (A:) Actin binding protein ABP1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Actin binding protein ABP1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.6 bits (103), Expect = 6e-07
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 119 YYIAAYPYDSTEPGDLTFNQDEVIYVTKKEND-WWTGTIGD 158
           +  A Y YD+ E  +LTF +++ I   +  +D WW G +  
Sbjct: 2   WATAEYDYDAAEDNELTFVENDKIINIEFVDDDWWLGELEK 42

>d1jo8a_ b.34.2.1 (A:) Actin binding protein ABP1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Actin binding protein ABP1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 35.9 bits (83), Expect = 4e-04
 Identities = 10/37 (27%), Positives = 15/37 (40%), Gaps = 2/37 (5%)

Query: 283 GTVVPVKQNAEPGWLAGELR--GQTGWFPESYVEPCD 317
              +   +  +  W  GEL   G  G FP +YV   +
Sbjct: 22  NDKIINIEFVDDDWWLGELEKDGSKGLFPSNYVSLGN 58

>d2v1ra1 b.34.2.1 (A:10-76) Peroxisomal membrane protein Pex13p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 67

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Peroxisomal membrane protein Pex13p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 61.8 bits (150), Expect = 3e-13
 Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 5/63 (7%)

Query: 167 SEYRRYRAIYEFVSRNGD-ELSFQPGDIIMVPVKQNAEPG----WLAGELRGQTGWFPES 221
           S+    RA+Y+FV  N + E++ + GD++ +  K++        W      G  G+ P +
Sbjct: 3   SKLEFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYN 62

Query: 222 YVE 224
           Y+E
Sbjct: 63  YIE 65

>d2v1ra1 b.34.2.1 (A:10-76) Peroxisomal membrane protein Pex13p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 67

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Peroxisomal membrane protein Pex13p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 34.4 bits (79), Expect = 0.001
 Identities = 6/25 (24%), Positives = 9/25 (36%)

Query: 290 QNAEPGWLAGELRGQTGWFPESYVE 314
                 W      G  G+ P +Y+E
Sbjct: 41  GRDSDWWKVRTKNGNIGYIPYNYIE 65

>d1bb9a_ b.34.2.1 (A:) Amphiphysin 2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 83

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Amphiphysin 2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 61.9 bits (150), Expect = 4e-13
 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 13/70 (18%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEP---GWLAG----------ELRGQTGW 217
           + +A +++ + + DEL  + GD+++V   QN E    GWL G          EL    G 
Sbjct: 14  KVQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGV 73

Query: 218 FPESYVEPCD 227
           FPE++ E   
Sbjct: 74  FPENFTERVQ 83

>d1ue9a_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 80

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.9 bits (150), Expect = 4e-13
 Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 7/74 (9%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL-----RGQTGWFPES 221
           S     +    +V+   ++LS  PG +I++  K     GW  GEL     + Q GWFP S
Sbjct: 5   SSGEIAQVTSAYVASGSEQLSLAPGQLILILKKN--TSGWWQGELQARGKKRQKGWFPAS 62

Query: 222 YVEPCDETGEVVPG 235
           +V+    + E   G
Sbjct: 63  HVKLLGPSSERASG 76

>d1wlpb1 b.34.2.1 (B:229-281) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.7 bits (147), Expect = 5e-13
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 2/54 (3%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
            Y AI  + +  GDE+S   G+ + V  K     GW        TG+FP  Y++
Sbjct: 2   PYVAIKAYTAVEGDEVSLLEGEAVEVIHKLL--DGWWVIRKDDVTGYFPSMYLQ 53

>d1wlpb1 b.34.2.1 (B:229-281) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.6 bits (95), Expect = 6e-06
 Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 119 YYIAAYPYDSTEPGDLTFNQDEVIYVTKKEND-WWTGTIGDRTARF 163
            Y+A   Y + E  +++  + E + V  K  D WW     D T  F
Sbjct: 2   PYVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYF 47

>d1phta_ b.34.2.1 (A:) Phosphatidylinositol 3-kinase (p85-alpha subunit, pi3k), SH3 domain {Human (Homo sapiens) [TaxId: 9606]} Length = 83

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phosphatidylinositol 3-kinase (p85-alpha subunit, pi3k), SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.5 bits (146), Expect = 1e-12
 Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 15/83 (18%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMV-------------PVKQNAEPGWLAG--EL 211
           +E  +YRA+Y++     +++    GDI+ V                +  E GWL G  E 
Sbjct: 1   AEGYQYRALYDYKKEREEDIDLHLGDILTVNKGSLVALGFSDGQEARPEEIGWLNGYNET 60

Query: 212 RGQTGWFPESYVEPCDETGEVVP 234
            G+ G FP +YVE         P
Sbjct: 61  TGERGDFPGTYVEYIGRKKISPP 83

>d1i07a_ b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 59

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: EPS8 SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 59.5 bits (144), Expect = 2e-12
 Identities = 13/59 (22%), Positives = 27/59 (45%), Gaps = 2/59 (3%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE 228
           +  ++ Y+FV+RN  ELS    D++   +  +    W      G +G+ P + ++    
Sbjct: 2   KYAKSKYDFVARNSSELSVMKDDVLE--ILDDRRQWWKVRNASGDSGFVPNNILDIMRT 58

>d1i07a_ b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 59

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: EPS8 SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.0 bits (101), Expect = 1e-06
 Identities = 8/37 (21%), Positives = 17/37 (45%)

Query: 118 KYYIAAYPYDSTEPGDLTFNQDEVIYVTKKENDWWTG 154
           KY  + Y + +    +L+  +D+V+ +      WW  
Sbjct: 2   KYAKSKYDFVARNSSELSVMKDDVLEILDDRRQWWKV 38

>d1i07a_ b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 59

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: EPS8 SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.0 bits (75), Expect = 0.004
 Identities = 5/36 (13%), Positives = 13/36 (36%)

Query: 283 GTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE 318
             V+ +  +    W      G +G+ P + ++    
Sbjct: 23  DDVLEILDDRRQWWKVRNASGDSGFVPNNILDIMRT 58

>d1wiea_ b.34.2.1 (A:) RIM binding protein 2, RIMBP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 96

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: RIM binding protein 2, RIMBP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.8 bits (144), Expect = 4e-12
 Identities = 17/86 (19%), Positives = 31/86 (36%), Gaps = 6/86 (6%)

Query: 160 TARFRGVSEYRRYRAIYEFVSRNG------DELSFQPGDIIMVPVKQNAEPGWLAGELRG 213
           T++ R   +     A Y +   +G       EL    G  + V    + +  +    L G
Sbjct: 8   TSKQRYSGKVHLCVARYSYNPFDGPNENPEAELPLTAGKYLYVYGDMDEDGFYEGELLDG 67

Query: 214 QTGWFPESYVEPCDETGEVVPGTELP 239
           Q G  P ++V+   +    +  T  P
Sbjct: 68  QRGLVPSNFVDFVQDNESRLASTSGP 93

>d1wiea_ b.34.2.1 (A:) RIM binding protein 2, RIMBP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 96

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: RIM binding protein 2, RIMBP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.3 bits (83), Expect = 7e-04
 Identities = 8/41 (19%), Positives = 16/41 (39%)

Query: 289 KQNAEPGWLAGELRGQTGWFPESYVEPCDETGEVVPGTELP 329
             + +  +    L GQ G  P ++V+   +    +  T  P
Sbjct: 53  DMDEDGFYEGELLDGQRGLVPSNFVDFVQDNESRLASTSGP 93

>d1zuua1 b.34.2.1 (A:2-57) BZZ1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 56

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BZZ1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 58.0 bits (140), Expect = 6e-12
 Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAE-PGWLAGELRGQTGWFPESYVE 224
           + +Y +V ++ DE++  PGD I +  +        +  +  G+TG  P +Y+ 
Sbjct: 3   KVLYAYVQKDDDEITITPGDKISLVARDTGSGWTKINNDTTGETGLVPTTYIR 55

>d1zuua1 b.34.2.1 (A:2-57) BZZ1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 56

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BZZ1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.0 bits (83), Expect = 3e-04
 Identities = 8/40 (20%), Positives = 15/40 (37%), Gaps = 1/40 (2%)

Query: 122 AAYPYDSTEPGDLTFNQDEVIYVTKKEN-DWWTGTIGDRT 160
             Y Y   +  ++T    + I +  ++    WT    D T
Sbjct: 4   VLYAYVQKDDDEITITPGDKISLVARDTGSGWTKINNDTT 43

>d2rn8a1 b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus musculus [TaxId: 10090]} Length = 53

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Mus musculus [TaxId: 10090]

 Score = 55.3 bits (133), Expect = 4e-11
 Identities = 10/52 (19%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 173 RAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE 224
            A+Y++ + +  EL+ +  +     +  +    W   +  G  G+ P SY+ 
Sbjct: 2   IALYDYQTNDPQELALRCDEEY-YLLDSSEIHWWRVQDKNGHEGYAPSSYLV 52

>d2rn8a1 b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus musculus [TaxId: 10090]} Length = 53

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Mus musculus [TaxId: 10090]

 Score = 36.4 bits (84), Expect = 2e-04
 Identities = 12/39 (30%), Positives = 17/39 (43%), Gaps = 1/39 (2%)

Query: 121 IAAYPYDSTEPGDLTFNQDEVIY-VTKKENDWWTGTIGD 158
           IA Y Y + +P +L    DE  Y +   E  WW     +
Sbjct: 2   IALYDYQTNDPQELALRCDEEYYLLDSSEIHWWRVQDKN 40

>d2rn8a1 b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus musculus [TaxId: 10090]} Length = 53

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Mus musculus [TaxId: 10090]

 Score = 32.9 bits (75), Expect = 0.004
 Identities = 6/30 (20%), Positives = 11/30 (36%)

Query: 285 VVPVKQNAEPGWLAGELRGQTGWFPESYVE 314
              +  +    W   +  G  G+ P SY+ 
Sbjct: 23  YYLLDSSEIHWWRVQDKNGHEGYAPSSYLV 52

>d1wfwa_ b.34.2.1 (A:) Kalirin-9a {Mouse (Mus musculus) [TaxId: 10090]} Length = 74

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Kalirin-9a
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 53.6 bits (128), Expect = 3e-10
 Identities = 12/64 (18%), Positives = 23/64 (35%), Gaps = 6/64 (9%)

Query: 167 SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLA-----GELRGQTGWFPES 221
           S       I ++ +   +E+    G+++ V +  N +   L             GW P S
Sbjct: 5   SSGSTMTVIKDYYALKENEICVSQGEVVQV-LAVNQQNMCLVYQPASDHSPAAEGWVPGS 63

Query: 222 YVEP 225
            + P
Sbjct: 64  ILAP 67

>d1ug1a_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010) {Human (Homo sapiens) [TaxId: 9606]} Length = 92

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein Baa76854.1 (KIAA1010)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.0 bits (121), Expect = 4e-09
 Identities = 10/62 (16%), Positives = 26/62 (41%), Gaps = 2/62 (3%)

Query: 170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAE--PGWLAGELRGQTGWFPESYVEPCD 227
           + ++A   F +    ++S   GD++ V  K++          +     G+   S+++P +
Sbjct: 18  KLFQAERNFNAAQDLDVSLLEGDLVGVIKKKDPMGSQNRWLIDNGVTKGFVYSSFLKPYN 77

Query: 228 ET 229
             
Sbjct: 78  PR 79

>d1ug1a_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010) {Human (Homo sapiens) [TaxId: 9606]} Length = 92

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein Baa76854.1 (KIAA1010)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (88), Expect = 1e-04
 Identities = 10/60 (16%), Positives = 24/60 (40%), Gaps = 5/60 (8%)

Query: 109 KTLANMMSDKYYIAAYPYDSTEPGDLTFNQDEVIYVTKKE-----NDWWTGTIGDRTARF 163
             LA    +K + A   +++ +  D++  + +++ V KK+      + W    G      
Sbjct: 9   SLLARYPPEKLFQAERNFNAAQDLDVSLLEGDLVGVIKKKDPMGSQNRWLIDNGVTKGFV 68

>d1i1ja_ b.34.2.1 (A:) Melanoma inhibitory activity protein {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Melanoma inhibitory activity protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.5 bits (120), Expect = 8e-09
 Identities = 13/70 (18%), Positives = 25/70 (35%), Gaps = 9/70 (12%)

Query: 171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEP---------GWLAGELRGQTGWFPES 221
              A+ ++++ +   L+   G ++ V  K              G   G+L  + G+FP S
Sbjct: 23  MAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSS 82

Query: 222 YVEPCDETGE 231
            V        
Sbjct: 83  IVREDQTLKP 92

>d1i1ja_ b.34.2.1 (A:) Melanoma inhibitory activity protein {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Melanoma inhibitory activity protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.1 bits (80), Expect = 0.002
 Identities = 10/51 (19%), Positives = 20/51 (39%), Gaps = 4/51 (7%)

Query: 119 YYIAAYPYDSTEPGDLTFNQDEVIYVTKKEN----DWWTGTIGDRTARFRG 165
             +A   Y + +   LT ++ +V+YV  K       +W G++         
Sbjct: 23  MAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLA 73

>d1kjwa1 b.34.2.1 (A:430-525) Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 96

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Psd-95
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 43.2 bits (101), Expect = 2e-06
 Identities = 13/67 (19%), Positives = 22/67 (32%), Gaps = 11/67 (16%)

Query: 173 RAIYEFVSRN-----GDELSFQPGDIIMVPVKQNAEPGWLA-----GELRGQTGWFPESY 222
           RA++++            LSF+ GD+ +  +    E  W A            G+ P   
Sbjct: 5   RALFDYDKTKDCGFLSQALSFRFGDV-LHVIDAGDEEWWQARRVHSDSETDDIGFIPSKR 63

Query: 223 VEPCDET 229
                E 
Sbjct: 64  RVERREW 70

>d1t0ha_ b.34.2.1 (A:) SH3-like domain of the L-type calcium channel {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 96

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 42.6 bits (100), Expect = 4e-06
 Identities = 15/62 (24%), Positives = 24/62 (38%), Gaps = 13/62 (20%)

Query: 173 RAIYEFVSRNGDE-------LSFQPGDIIMVPVKQNAEPGWLAGELR---GQTGWFPESY 222
           R    + +   D+       +SF+  D + V  K N    W  G L     + G+ P S 
Sbjct: 25  RTNVRYSAAQEDDVPVPGMAISFEAKDFLHVKEKFN--NDWWIGRLVKEGCEIGFIP-SP 81

Query: 223 VE 224
           V+
Sbjct: 82  VK 83

>d1vyva1 b.34.2.1 (A:71-215) SH3-like domain of the L-type calcium channel {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 145

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 37.0 bits (85), Expect = 8e-04
 Identities = 11/80 (13%), Positives = 21/80 (26%), Gaps = 12/80 (15%)

Query: 173 RAIYEFVSRNGD-------ELSFQPGDIIMVPVKQNAEPGWLAGEL---RGQTGWFPESY 222
           +    +     +        +SF   D +   +K+     W  G L     + G+ P   
Sbjct: 27  KTNVSYCGALDEDVPVPSSAVSFDAKDFLH--IKEKYNNDWWIGRLVKEGCEIGFIPSPL 84

Query: 223 VEPCDETGEVVPGTELPGDK 242
                   +        G K
Sbjct: 85  RLENIRIQQEQKRKRFHGGK 104

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	336
d1udla_	98	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	99.77
d1udla_	98	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	99.66
d1utia_	57	Grb2-related adaptor protein 2 (Mona/Gads) {Mouse	99.6
d1sema_	58	Growth factor receptor-bound protein 2 (GRB2), N-	99.6
d1oota_	58	Hypothetical protein YFR024c {Baker's yeast (Sacch	99.59
d1gcqa_	56	Growth factor receptor-bound protein 2 (GRB2), N-	99.59
d1uj0a_	58	Signal transducing adaptor molecule Stam2 {Mouse (	99.57
d1u06a1	55	alpha-Spectrin, SH3 domain {Chicken (Gallus gallus	99.57
d1k4us_	62	p67phox {Human (Homo sapiens) [TaxId: 9606]}	99.57
d1ng2a1	58	p47pox (neutrophil cytosolic factor 1) {Human (Hom	99.56
d1wlpb1	53	p47pox (neutrophil cytosolic factor 1) {Human (Hom	99.56
d1ycsb2	63	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.54
d1uffa_	93	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	99.54
d1gria1	56	Growth factor receptor-bound protein 2 (GRB2), N-	99.53
d1jo8a_	58	Actin binding protein ABP1 {Baker's yeast (Sacchar	99.52
d1u5sa1	71	Nck-2 {Human (Homo sapiens) [TaxId: 9606]}	99.52
d1opka1	57	Abl tyrosine kinase, SH3 domain {Mouse (Mus muscul	99.52
d1ujya_	76	Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId: 9606	99.52
d1ugva_	72	Olygophrenin-1 like protein (KIAA0621) {Human (Hom	99.52
d1j3ta_	74	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	99.51
d1spka_	72	BAI1-associated protein 2-like 1 (RIKEN cDNA 13000	99.49
d1ue9a_	80	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	99.49
d1arka_	60	SH3 domain from nebulin {Human (Homo sapiens) [Tax	99.49
d1uhfa_	69	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	99.48
d1ug1a_	92	Hypothetical protein Baa76854.1 (KIAA1010) {Human	99.48
d2rn8a1	53	Bruton's tyrosine kinase {Mus musculus [TaxId: 100	99.48
d1ckaa_	57	C-Crk, N-terminal SH3 domain {Mouse (Mus musculus)	99.48
d1uhca_	79	Hypothetical protein Baa76854.1 (KIAA1010) {Human	99.47
d1k9aa1	71	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.47
d1ng2a2	118	p47pox (neutrophil cytosolic factor 1) {Human (Hom	99.46
d2v1ra1	67	Peroxisomal membrane protein Pex13p {Baker's yeast	99.46
d1awwa_	67	Bruton's tyrosine kinase {Human (Homo sapiens) [Ta	99.45
d1efna_	57	Fyn proto-oncogene tyrosine kinase, SH3 domain {Hu	99.44
d1gl5a_	67	tyrosine kinase tec {Mouse (Mus musculus) [TaxId:	99.44
d1utia_	57	Grb2-related adaptor protein 2 (Mona/Gads) {Mouse	99.43
d1phta_	83	Phosphatidylinositol 3-kinase (p85-alpha subunit,	99.43
d1u06a1	55	alpha-Spectrin, SH3 domain {Chicken (Gallus gallus	99.43
d1wfwa_	74	Kalirin-9a {Mouse (Mus musculus) [TaxId: 10090]}	99.43
d1gcqa_	56	Growth factor receptor-bound protein 2 (GRB2), N-	99.42
d1k4us_	62	p67phox {Human (Homo sapiens) [TaxId: 9606]}	99.42
d1fmka1	64	c-src protein tyrosine kinase {Human (Homo sapiens	99.42
d1oota_	58	Hypothetical protein YFR024c {Baker's yeast (Sacch	99.41
d1wlpb1	53	p47pox (neutrophil cytosolic factor 1) {Human (Hom	99.41
d1gcqc_	69	Vav N-terminal SH3 domain {Mouse (Mus musculus) [T	99.4
d1sema_	58	Growth factor receptor-bound protein 2 (GRB2), N-	99.4
d1zuua1	56	BZZ1 {Baker's yeast (Saccharomyces cerevisiae) [Ta	99.4
d1ujya_	76	Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId: 9606	99.4
d1ng2a1	58	p47pox (neutrophil cytosolic factor 1) {Human (Hom	99.4
d1gria1	56	Growth factor receptor-bound protein 2 (GRB2), N-	99.39
d2hspa_	71	Phospholipase C, SH3 domain {Human (Homo sapiens)	99.39
d1j3ta_	74	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	99.39
d1i07a_	59	EPS8 SH3 domain {Mouse (Mus musculus) [TaxId: 1009	99.38
d1ugva_	72	Olygophrenin-1 like protein (KIAA0621) {Human (Hom	99.38
d1uj0a_	58	Signal transducing adaptor molecule Stam2 {Mouse (	99.38
d1bb9a_	83	Amphiphysin 2 {Rat (Rattus norvegicus) [TaxId: 101	99.38
d1qcfa1	65	Hemapoetic cell kinase Hck {Human (Homo sapiens) [	99.37
d1wiea_	96	RIM binding protein 2, RIMBP2 {Human (Homo sapiens	99.37
d1jo8a_	58	Actin binding protein ABP1 {Baker's yeast (Sacchar	99.36
d1opka1	57	Abl tyrosine kinase, SH3 domain {Mouse (Mus muscul	99.35
d1ng2a2	118	p47pox (neutrophil cytosolic factor 1) {Human (Hom	99.34
d1i07a_	59	EPS8 SH3 domain {Mouse (Mus musculus) [TaxId: 1009	99.34
d1ue9a_	80	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	99.34
d1uffa_	93	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	99.33
d2iima1	62	p56-lck tyrosine kinase, SH3 domain {Human (Homo s	99.32
d1spka_	72	BAI1-associated protein 2-like 1 (RIKEN cDNA 13000	99.31
d1gl5a_	67	tyrosine kinase tec {Mouse (Mus musculus) [TaxId:	99.31
d1uhfa_	69	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	99.3
d2rn8a1	53	Bruton's tyrosine kinase {Mus musculus [TaxId: 100	99.29
d1arka_	60	SH3 domain from nebulin {Human (Homo sapiens) [Tax	99.27
d1uhca_	79	Hypothetical protein Baa76854.1 (KIAA1010) {Human	99.27
d1k9aa1	71	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.26
d1i1ja_	106	Melanoma inhibitory activity protein {Human (Homo	99.26
d1wiea_	96	RIM binding protein 2, RIMBP2 {Human (Homo sapiens	99.26
d1awwa_	67	Bruton's tyrosine kinase {Human (Homo sapiens) [Ta	99.26
d1ycsb2	63	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.25
d2hspa_	71	Phospholipase C, SH3 domain {Human (Homo sapiens)	99.25
d1ug1a_	92	Hypothetical protein Baa76854.1 (KIAA1010) {Human	99.25
d1qcfa1	65	Hemapoetic cell kinase Hck {Human (Homo sapiens) [	99.24
d1efna_	57	Fyn proto-oncogene tyrosine kinase, SH3 domain {Hu	99.24
d2v1ra1	67	Peroxisomal membrane protein Pex13p {Baker's yeast	99.24
d1u5sa1	71	Nck-2 {Human (Homo sapiens) [TaxId: 9606]}	99.24
d1gcqc_	69	Vav N-terminal SH3 domain {Mouse (Mus musculus) [T	99.23
d1ckaa_	57	C-Crk, N-terminal SH3 domain {Mouse (Mus musculus)	99.23
d1kjwa1	96	Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]}	99.21
d1fmka1	64	c-src protein tyrosine kinase {Human (Homo sapiens	99.21
d1wfwa_	74	Kalirin-9a {Mouse (Mus musculus) [TaxId: 10090]}	99.2
d2iima1	62	p56-lck tyrosine kinase, SH3 domain {Human (Homo s	99.19
d1t0ha_	96	SH3-like domain of the L-type calcium channel {Rab	99.18
d1zuua1	56	BZZ1 {Baker's yeast (Saccharomyces cerevisiae) [Ta	99.14
d1phta_	83	Phosphatidylinositol 3-kinase (p85-alpha subunit,	99.14
d1bb9a_	83	Amphiphysin 2 {Rat (Rattus norvegicus) [TaxId: 101	99.13
d1t0ha_	96	SH3-like domain of the L-type calcium channel {Rab	99.05
d1i1ja_	106	Melanoma inhibitory activity protein {Human (Homo	99.04
d1vyva1	145	SH3-like domain of the L-type calcium channel {Rat	98.93
d1kjwa1	96	Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]}	98.92
d1vyva1	145	SH3-like domain of the L-type calcium channel {Rat	98.78
d1vyua1	136	SH3-like domain of the L-type calcium channel {Rat	98.63
d1vyua1	136	SH3-like domain of the L-type calcium channel {Rat	98.47
d1ri9a_	77	Fyn-binding protein (T-cell adapter protein adap)	93.27
d1ri9a_	77	Fyn-binding protein (T-cell adapter protein adap)	92.19

>d1udla_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=1.9e-19  Score=139.13  Aligned_cols=89  Identities=27%  Similarity=0.509  Sum_probs=70.1

Q ss_pred             eCceeeecccceeecCCCCCCCCCCCCCCCCccccccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEee
Q psy7077         212 RGQTGWFPESYVEPCDETGEVVPGTELPGDKHHLELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQN  291 (336)
Q Consensus       212 ~g~~G~fP~~yve~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~  291 (336)
                      .|++|+||++||+.+.+......+.    ......++|.|+|.+...++|+                 |++||+|.|+++
T Consensus         6 ~G~~G~~P~~yv~~~~~~~~~~~~~----~~~~~~~~Alydy~a~~~~ELs-----------------f~~Gd~i~Vl~~   64 (98)
T d1udla_           6 SGQKGWFPASHVKLLGPSSERATPA----FHPVCQVIAMYDYAANNEDELS-----------------FSKGQLINVMNK   64 (98)
T ss_dssp             SSCCSSCCCCCCCCCSCCCCCCCSC----CCCSEEEEESSCCCCSSTTSCC-----------------CCTTCEEEECBC
T ss_pred             CCceeeEcccceeECCCcccccCCC----CCCccEEEEccCCCCCCCCEee-----------------EcCCCEEEEeEe
Confidence            5899999999999887654332221    1123345677888777766654                 999999999999


Q ss_pred             cCCCeEEEEeCCceeEeeCCCeeecCCCCC
Q psy7077         292 AEPGWLAGELRGQTGWFPESYVEPCDETGE  321 (336)
Q Consensus       292 ~~~~W~~g~~~G~~G~fPsnyV~~i~~~~~  321 (336)
                      .+++||.|+++|++||||+|||+++.+.+.
T Consensus        65 ~~~gWw~g~~~g~~G~~P~nyVe~~~~~~~   94 (98)
T d1udla_          65 DDPDWWQGEINGVTGLFPSNYVKMTTDSSG   94 (98)
T ss_dssp             CSSSEEBCBSSSCBCCEETTSEEECCCCSS
T ss_pred             cCCCeEEEEECCeEEEEchHHEEECCCCCC
Confidence            999999999999999999999999986543

>d1udla_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=5.1e-17  Score=125.21  Aligned_cols=71  Identities=32%  Similarity=0.662  Sum_probs=61.2

Q ss_pred             CCCccccccc----------------ccceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecc
Q psy7077         157 GDRTARFRGV----------------SEYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPE  220 (336)
Q Consensus       157 ~~~~g~~p~~----------------~~~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~  220 (336)
                      .|+.|+||..                ....+++|||||+++.++||+|++||+|.|+  ...++|||+|+++|++||||+
T Consensus         6 ~G~~G~~P~~yv~~~~~~~~~~~~~~~~~~~~~Alydy~a~~~~ELsf~~Gd~i~Vl--~~~~~gWw~g~~~g~~G~~P~   83 (98)
T d1udla_           6 SGQKGWFPASHVKLLGPSSERATPAFHPVCQVIAMYDYAANNEDELSFSKGQLINVM--NKDDPDWWQGEINGVTGLFPS   83 (98)
T ss_dssp             SSCCSSCCCCCCCCCSCCCCCCCSCCCCSEEEEESSCCCCSSTTSCCCCTTCEEEEC--BCCSSSEEBCBSSSCBCCEET
T ss_pred             CCceeeEcccceeECCCcccccCCCCCCccEEEEccCCCCCCCCEeeEcCCCEEEEe--EecCCCeEEEEECCeEEEEch
Confidence            4677888863                1235799999999999999999999999996  456789999999999999999


Q ss_pred             cceeecCCC
Q psy7077         221 SYVEPCDET  229 (336)
Q Consensus       221 ~yve~~~~~  229 (336)
                      |||+.+.+.
T Consensus        84 nyVe~~~~~   92 (98)
T d1udla_          84 NYVKMTTDS   92 (98)
T ss_dssp             TSEEECCCC
T ss_pred             HHEEECCCC
Confidence            999998854

>d1utia_ b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona/Gads) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Grb2-related adaptor protein 2 (Mona/Gads)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.60  E-value=4.7e-16  Score=107.50  Aligned_cols=55  Identities=38%  Similarity=0.842  Sum_probs=50.7

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeec
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC  226 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~  226 (336)
                      +.|+|+|+|.++.++||+|++||+|.|+  +..++|||.|+.+|+.|+||++||+++
T Consensus         2 ~yarAlydy~~~~~~eLs~~~Gd~i~v~--~~~~~~Ww~g~~~g~~G~~P~~yve~i   56 (57)
T d1utia_           2 RWARALYDFEALEEDELGFRSGEVVEVL--DSSNPSWWTGRLHNKLGLFPANYVAPM   56 (57)
T ss_dssp             CEEEESSCBCCCSTTBCCBCTTCEEEEE--ECCSSSEEEEEETTEEEEEEGGGEEEC
T ss_pred             EEEEECcCCCCCCcCCcCCCCCCEEEEe--EEcCCCEEEEEECCcEEEEEHHHEEEc
Confidence            4689999999999999999999999996  457789999999999999999999975

>d1sema_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Caenorhabditis elegans, SEM-5 [TaxId: 6239]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Caenorhabditis elegans, SEM-5 [TaxId: 6239]

Probab=99.60  E-value=6.7e-16  Score=107.11  Aligned_cols=57  Identities=32%  Similarity=0.761  Sum_probs=51.7

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD  227 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~  227 (336)
                      ...++|+|+|.++.++||+|++||+|.|+  ...++|||.|+++|+.||||++||++++
T Consensus         2 ~~~~~Alydy~~~~~~eLsf~~Gd~i~v~--~~~~~~W~~g~~~g~~G~~P~~yvep~n   58 (58)
T d1sema_           2 TKFVQALFDFNPQESGELAFKRGDVITLI--NKDDPNWWEGQLNNRRGIFPSNYVCPYN   58 (58)
T ss_dssp             CCEEEESSCBCCSSTTBCCBCTTCEEEEE--ECSSSSEEEEEETTEEEEEEGGGEEECC
T ss_pred             CEEEEECCCCCcCCcCCcCCCCCCEEEEe--EEcCCCEEEEEECCeEEEEEhhhEEECc
Confidence            35789999999999999999999999995  4567899999999999999999999763

>d1oota_ b.34.2.1 (A:) Hypothetical protein YFR024c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein YFR024c
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.59  E-value=7.3e-16  Score=106.93  Aligned_cols=57  Identities=32%  Similarity=0.723  Sum_probs=51.0

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeec
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC  226 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~  226 (336)
                      ++|+|+|+|.+++++||+|++||+|.|++....+.+||.++.+|++||||++||+.+
T Consensus         2 P~~~Alydy~a~~~~ELs~~~Gd~v~vl~~~~~~~~W~~~~~~g~~G~vP~~yve~i   58 (58)
T d1oota_           2 PKAVALYSFAGEESGDLPFRKGDVITILKKSDSQNDWWTGRVNGREGIFPANYVELV   58 (58)
T ss_dssp             CEEEESSCBCCCSTTBCCBCTTCEEEEEECCSCTTSEEEEEETTEEEEEEGGGEEEC
T ss_pred             CeEEEccCCCCCCCCCccCCCCCEEEEEEeecCCCCEEEEEECCcEEEEcHHHEEEC
Confidence            479999999999999999999999999754444578999999999999999999874

>d1gcqa_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=9.4e-16  Score=105.60  Aligned_cols=54  Identities=41%  Similarity=0.849  Sum_probs=49.7

Q ss_pred             eeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeec
Q psy7077         171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC  226 (336)
Q Consensus       171 ~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~  226 (336)
                      .++|+|+|.++.++||+|++||+|.|+  +..++|||.|+.+|++||||++||+++
T Consensus         3 yv~Alydy~~~~~~eLs~~~Gd~i~v~--~~~~~~W~~g~~~g~~G~~P~~yv~~v   56 (56)
T d1gcqa_           3 YVQALFDFDPQEDGELGFRRGDFIHVM--DNSDPNWWKGACHGQTGMFPRNYVTPV   56 (56)
T ss_dssp             EEEESSCBCCCSTTBCCBCTTCEEEEE--ECCSSSEEEEEETTEEEEEEGGGEEEC
T ss_pred             EEEECcCCCcCCcCCcCCCCCCEEEEE--EecCCCEEEEEECCeEEEEEHhHEEEC
Confidence            578999999999999999999999995  456789999999999999999999875

>d1uj0a_ b.34.2.1 (A:) Signal transducing adaptor molecule Stam2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Signal transducing adaptor molecule Stam2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.57  E-value=1.3e-15  Score=105.59  Aligned_cols=55  Identities=36%  Similarity=0.765  Sum_probs=50.3

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceee
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP  225 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~  225 (336)
                      .++++|+|+|.++.++||+|++||+|.|+  +..++|||.|+.+|+.||||++||+.
T Consensus         2 ~rr~~Alydy~~~~~~eLsf~~Gd~i~v~--~~~~~~W~~g~~~g~~G~~P~~yV~~   56 (58)
T d1uj0a_           2 ARRVRALYDFEAVEDNELTFKHGELITVL--DDSDANWWQGENHRGTGLFPSNFVTT   56 (58)
T ss_dssp             CEEEEESSCBCCCSTTBCCBCTTCEEEEE--ECCSSSEEEEEETTEEEEEEGGGEES
T ss_pred             CCEEEECCCCCCCCcCCcCCCCCCEEEEe--EEeCCCEEEEEECCeEEEEehHhEee
Confidence            36899999999999999999999999995  45778999999999999999999974

>d1u06a1 b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: alpha-Spectrin, SH3 domain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.57  E-value=1.8e-15  Score=103.81  Aligned_cols=54  Identities=22%  Similarity=0.563  Sum_probs=49.7

Q ss_pred             eeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeec
Q psy7077         171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPC  226 (336)
Q Consensus       171 ~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~  226 (336)
                      .++|+|+|.++.++||+|++||+|.|+  ++.++|||.|+.+|+.||||+|||+.+
T Consensus         2 ~~vAl~dy~~~~~~eLs~~~Gd~v~v~--~~~~~~Ww~g~~~g~~G~~P~~yv~~i   55 (55)
T d1u06a1           2 LVLALYDYQEKSPREVTMKKGDILTLL--NSTNKDWWKVEVNDRQGFVPAAYVKKL   55 (55)
T ss_dssp             EEEECSCBCCCSTTBCCBCTTCEEEEE--ECCSSSEEEEEETTEEEEEEGGGEEEC
T ss_pred             EEEECCCCCCCCcCCccCCCCCEEEEe--EEcCCCEEEEEECCeEEEEeHHHEEEC
Confidence            478999999999999999999999995  457889999999999999999999874

>d1k4us_ b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p67phox
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=1e-15  Score=107.61  Aligned_cols=57  Identities=33%  Similarity=0.707  Sum_probs=51.7

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD  227 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~  227 (336)
                      ...++|+|+|.++.++||+|++||+|.|+  +..++|||.|+.+|+.||||++||++..
T Consensus         5 g~~v~Aly~y~a~~~~eLsf~~Gd~i~vl--~~~~~~Ww~g~~~g~~G~~P~~yVe~~~   61 (62)
T d1k4us_           5 GSQVEALFSYEATQPEDLEFQEGDIILVL--SKVNEEWLEGESKGKVGIFPKVFVEDSA   61 (62)
T ss_dssp             CEEEECCSCBCCCSSSBCCBCSSCEEEEE--EESSSSCEEEECSSCEEEECGGGCCCSC
T ss_pred             CCEEEECCCCCCCCcCCcCCCCCCEEEEe--EEcCCCEEEEEECCcEEEEchHHeEECC
Confidence            56899999999999999999999999996  4467899999999999999999998754

>d1ng2a1 b.34.2.1 (A:157-214) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=1.1e-15  Score=106.16  Aligned_cols=56  Identities=34%  Similarity=0.857  Sum_probs=51.4

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecC
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD  227 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~  227 (336)
                      ..++|+|||.++.++||+|++||+|.|+  ++.+++||.|+.+|+.||||++||++++
T Consensus         3 ~~~~al~dy~~~~~~eLs~~~Gd~i~vl--~~~~~~Ww~~~~~g~~G~~P~~yve~ld   58 (58)
T d1ng2a1           3 QTYRAIADYEKTSGSEMALSTGDVVEVV--EKSESGWWFCQMKAKRGWIPASFLEPLD   58 (58)
T ss_dssp             EEEECSSCBCCSSTTCCCBCTTCEEEEE--ECCTTSCCEEEECCCCCCCCGGGCCCSS
T ss_pred             eEEEECccCcCCCCCCcCCCCCCEEEEE--EecCCCeEEEEECCCCcEEcHhHEEECc
Confidence            5789999999999999999999999995  4578899999999999999999998764

>d1wlpb1 b.34.2.1 (B:229-281) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=1.9e-15  Score=102.80  Aligned_cols=52  Identities=31%  Similarity=0.584  Sum_probs=48.2

Q ss_pred             eeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeeccccee
Q psy7077         171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVE  224 (336)
Q Consensus       171 ~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve  224 (336)
                      .++|+|+|+++.++||+|++||+|.|+  .+.++|||.|+.+|++||||++||+
T Consensus         2 ~yval~~y~a~~~~eLs~~~Gd~v~vl--~~~~~gWw~g~~~g~~G~~P~~yve   53 (53)
T d1wlpb1           2 PYVAIKAYTAVEGDEVSLLEGEAVEVI--HKLLDGWWVIRKDDVTGYFPSMYLQ   53 (53)
T ss_dssp             EEEECSCBCCCSSSBCCBCTTCEEEEE--ECCTTSSEEEESSSCEEEECSTTEE
T ss_pred             eEEEeeeECCCCCCEecCCCCCEEEEE--eecCCceEEEEECCcEeEecHHhCC
Confidence            468999999999999999999999995  5688899999999999999999996

>d1ycsb2 b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=3.3e-15  Score=105.29  Aligned_cols=58  Identities=21%  Similarity=0.463  Sum_probs=50.2

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeec-CCCCeEEEEeeCceeeecccceeec
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQN-AEPGWLAGELRGQTGWFPESYVEPC  226 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~-~~~gW~~g~~~g~~G~fP~~yve~~  226 (336)
                      ...++|+|||.++.++||+|++||+|.|++... .+.|||.|+.+|++|+||++||+.+
T Consensus         4 ~g~v~Alydy~a~~~~ELs~~~Gd~i~vl~~~~~~~~gW~~g~~~g~~G~~P~~yv~~~   62 (63)
T d1ycsb2           4 KGVIYALWDYEPQNDDELPMKEGDCMTIIHREDEDEIEWWWARLNDKEGYVPRNLLGLY   62 (63)
T ss_dssp             GGEEEESSCBCCSSTTBCCBCSSCEEEECCCCTTSCSSEEEEEETTEEEEEEGGGEECC
T ss_pred             CCEEEEeeCCCCCCCCCcCCCCCCEEEEEEecCCCCCCEEEEEECCeEEEEchHHhEeC
Confidence            346889999999999999999999999975432 2458999999999999999999875

>d1uffa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=1.1e-14  Score=110.69  Aligned_cols=61  Identities=51%  Similarity=0.950  Sum_probs=54.3

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  229 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~~  229 (336)
                      ..+++|+|+|.++.++||+|++||+|.|++....+.+||.++++|+.||||++||+.+...
T Consensus         5 ~~~~rAlydy~~~~~~ELs~~~Gd~v~Vl~~~~~~~~w~~~~~~g~~G~~P~~Yve~~~~~   65 (93)
T d1uffa_           5 SSGYRALYPFEARNHDEMSFNSGDIIQVDEKTVGEPGWLYGSFQGNFGWFPCNYVEKMPSS   65 (93)
T ss_dssp             CCCEEESSCBCCCSSSCCCBCTTCEEEECSSCCCSSSEEEEEETTEEEEEETTTEEECCSS
T ss_pred             CeEEEECccCCCCCCCCccCcCCCEEEEEEeccCCCCEEEEEeCCcEEEEchHHEEECCCC
Confidence            4678999999999999999999999999755445678999999999999999999998754

>d1gria1 b.34.2.1 (A:1-56) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=3.1e-15  Score=102.94  Aligned_cols=54  Identities=37%  Similarity=0.738  Sum_probs=45.3

Q ss_pred             eeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceee
Q psy7077         171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEP  225 (336)
Q Consensus       171 ~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~  225 (336)
                      .|+|+|+|.++.++||+|++||+|.|+. ...+++||.|+.+|+.||||+|||+.
T Consensus         2 ~a~Alydy~a~~~~ELs~~~Gd~v~v~~-~~~~~~W~~~~~~g~~G~vP~nyvev   55 (56)
T d1gria1           2 EAIAKYDFKATADDELSFKRGDILKVLN-EECDQNWYKAELNGKDGFIPKNYIEM   55 (56)
T ss_dssp             EEEECSCBCCCSSSCCCBCTTCEEEC-------CCEEEEESSSCEEEEEGGGEEC
T ss_pred             EEEEeeCCCCCCCCCcCCCCCCEEEEEe-ccCCCCeEEEEECCcEEEEehhhEEE
Confidence            6899999999999999999999999863 34567899999999999999999974

>d1jo8a_ b.34.2.1 (A:) Actin binding protein ABP1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Actin binding protein ABP1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.52  E-value=7e-15  Score=101.93  Aligned_cols=56  Identities=30%  Similarity=0.565  Sum_probs=50.0

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe--eCceeeecccceeecC
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPCD  227 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~--~g~~G~fP~~yve~~~  227 (336)
                      +.|+|+|+|.++.++||+|++||+|.|+  +..+++||.|+.  +|++|+||+|||+.++
T Consensus         1 P~~~Alydy~~~~~~eLs~~~Gd~i~v~--~~~~~~Ww~~~~~~~g~~G~~P~~yVe~in   58 (58)
T d1jo8a_           1 PWATAEYDYDAAEDNELTFVENDKIINI--EFVDDDWWLGELEKDGSKGLFPSNYVSLGN   58 (58)
T ss_dssp             CCEEESSCBCCCSTTBCCBCTTCEEEEE--ECCSSSEEEEEETTTCCEEEEEGGGEEECC
T ss_pred             CEEEEccCCCCCCcCCcCCCCCCEEEEE--EEcCCCEEEEEECCCCCEEEEchHHEEEcC
Confidence            3689999999999999999999999995  557889999986  5799999999999864

>d1u5sa1 b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Nck-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=7.3e-15  Score=106.10  Aligned_cols=61  Identities=30%  Similarity=0.565  Sum_probs=53.3

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe-eCceeeecccceeecCCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL-RGQTGWFPESYVEPCDET  229 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~-~g~~G~fP~~yve~~~~~  229 (336)
                      ...++|+|+|.++.++||+|++||+|.|+...+.++|||.++. +|+.||||+|||+.+.+.
T Consensus         6 l~~~~Alydf~~~~~~eLs~~~Gd~i~vl~~~~~~~~Ww~~~~~~G~~G~vP~~yv~~~~~~   67 (71)
T d1u5sa1           6 LHVVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVVLSDG   67 (71)
T ss_dssp             SSEEEESSCCCCCSSSBCCCCSSCCEEEEECCCTTTCEEEEEETTTEEEEEETTSEEECCCS
T ss_pred             cEEEEECccCCCCCCCEeeECCCCEEEEEEcccCCCCeEEEEECCCCEEEEChHHEEECCCC
Confidence            4678999999999999999999999999755445568999984 789999999999999754

>d1opka1 b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Abl tyrosine kinase, SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.52  E-value=8.8e-15  Score=101.01  Aligned_cols=56  Identities=27%  Similarity=0.646  Sum_probs=49.2

Q ss_pred             eeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecC
Q psy7077         171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD  227 (336)
Q Consensus       171 ~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~  227 (336)
                      .++|+|+|.++.++||+|++||+|.|++. ..+++||.++.+|+.||||++||++++
T Consensus         2 ~~vAlydy~a~~~~eLs~~~Gd~i~vl~~-~~~~~W~~~~~~g~~G~~P~~yv~~vd   57 (57)
T d1opka1           2 LFVALYDFVASGDNTLSITKGEKLRVLGY-NHNGEWCEAQTKNGQGWVPSNYITPVN   57 (57)
T ss_dssp             EEEESSCBCCCSTTBCCBCTTCEEEEEEE-CTTSSEEEEECSSCEEEEEGGGEEESS
T ss_pred             EEEECccCCCCCcCCcCCCCCCEEEEeEe-cCCCCEEEEEECCCEeEEchhheEECC
Confidence            47899999999999999999999999743 345578899999999999999999864

>d1ujya_ b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Rac/CDC42 GEF 6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=2.4e-15  Score=110.15  Aligned_cols=59  Identities=42%  Similarity=0.764  Sum_probs=53.1

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  229 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~~  229 (336)
                      ...++|+|+|.++.++||+|++||+|.|+  ++.+++||+|+++|++||||++||+.+...
T Consensus        10 ~~~~rAlydy~a~~~~eLs~~~Gd~i~v~--~~~~~~W~~g~~~g~~G~~P~~yv~~i~~~   68 (76)
T d1ujya_          10 QLIVKARFNFKQTNEDELSVCKGDIIYVT--RVEEGGWWEGTLNGRTGWFPSNYVREIKSS   68 (76)
T ss_dssp             CEEEECCSCBCCSSTTSCCBCSSCCEEES--SCCSSSCEEEEETTEEEEECTTTSEECCHH
T ss_pred             CEEEEECccCCCCCCCCccCCCCCEEEEe--EEcCCCEEEEEECCcEEEEchHHEEECCCC
Confidence            45789999999999999999999999996  456789999999999999999999998743

>d1ugva_ b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA0621) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Olygophrenin-1 like protein (KIAA0621)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=5.4e-15  Score=107.09  Aligned_cols=59  Identities=39%  Similarity=0.744  Sum_probs=52.3

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~  228 (336)
                      ..+++|+|+|.++.++||+|++||+|.|+. ...+++||.++.+|+.||||++||+.++.
T Consensus        10 ~~~~~alydy~~~~~~eLs~~~Gd~i~v~~-~~~~~~W~~g~~~g~~G~~P~~yve~i~~   68 (72)
T d1ugva_          10 FRKAKALYACKAEHDSELSFTAGTVFDNVH-PSQEPGWLEGTLNGKTGLIPENYVEFLSG   68 (72)
T ss_dssp             CCCEEESSCBCCCSSSBCCBCTTCEEBSCC-BCSSTTEEEEESSSCEEEEEGGGEEECCS
T ss_pred             CEEEEEcccCCCCCCCEecCCCCCEEEEee-ccCCCCEEEEEeCCCEEEEchHHEEECCC
Confidence            468999999999999999999999999863 33556899999999999999999999874

>d1j3ta_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=1.1e-14  Score=105.97  Aligned_cols=58  Identities=31%  Similarity=0.659  Sum_probs=52.2

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  229 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~~  229 (336)
                      ..+++|+|+|.++.++||+|++||+|.|++  . +++||+++++|++||||++||+.+...
T Consensus        10 ~~~~~alydy~a~~~~ELs~~~Gd~i~vl~--~-~~~ww~g~~~g~~G~fP~~yve~i~~~   67 (74)
T d1j3ta_          10 NLKAQALCSWTAKKDNHLNFSKHDIITVLE--Q-QENWWFGEVHGGRGWFPKSYVKIIPGS   67 (74)
T ss_dssp             CCEEEESSCBCCCSTTBCCBCTTCEEEEEE--E-CSSEEEEESTTCCCEEEGGGEEECCCS
T ss_pred             CeEEEEccCCCCCCCCEecCCCCCEEEEEE--c-cCCeEEEEECCcEEEEchhhEEECCCC
Confidence            468999999999999999999999999964  2 468999999999999999999998754

>d1spka_ b.34.2.1 (A:) BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.49  E-value=1.5e-14  Score=104.70  Aligned_cols=59  Identities=31%  Similarity=0.655  Sum_probs=50.2

Q ss_pred             ceeeeeeeecccC-CCCCCCCCCCCEEEEeeeecCCCCeEEEEee--CceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSR-NGDELSFQPGDIIMVPVKQNAEPGWLAGELR--GQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~-~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~--g~~G~fP~~yve~~~~  228 (336)
                      ..+++|+|+|++. +++||+|++||+|.|+. ...++|||.|+++  |++||||+|||+.++.
T Consensus         7 ~~~~~Alydy~~~~~~deLsf~~Gd~i~vl~-~~~~~gW~~g~~~~~g~~G~fP~nyVe~i~~   68 (72)
T d1spka_           7 GQKVKTIFPHTAGNNKTLLSFAQGDVLTLLI-PEEKDGWLYGEHDTTKARGWFPSSYTKLLSG   68 (72)
T ss_dssp             SCEEECSSCBCCSSCSSBCCBCTTCEEEECC-SSCBTTEEEEEETTTCCEEEEEGGGCEECSS
T ss_pred             CCEEEEeeccCCCCCCCEeeEcCCCEEEEEE-eecCCCeEEEEECCCCCEEEEchhhEEECCC
Confidence            5689999999985 67899999999999963 3456789999874  7899999999999874

>d1ue9a_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=3.1e-14  Score=105.20  Aligned_cols=61  Identities=30%  Similarity=0.638  Sum_probs=52.7

Q ss_pred             cceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEee-----CceeeecccceeecCCCC
Q psy7077         168 EYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR-----GQTGWFPESYVEPCDETG  230 (336)
Q Consensus       168 ~~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~-----g~~G~fP~~yve~~~~~~  230 (336)
                      ....++|+|+|+++.++||+|++||+|.|+  .+.+++||+|++.     |++||||++||+.+.+..
T Consensus         6 ~g~~~~al~~y~~~~~~eLs~~~Gd~i~Vl--~~~~~~Ww~g~~~~~~~~~~~G~~P~~yv~~~~~~~   71 (80)
T d1ue9a_           6 SGEIAQVTSAYVASGSEQLSLAPGQLILIL--KKNTSGWWQGELQARGKKRQKGWFPASHVKLLGPSS   71 (80)
T ss_dssp             CCEEEEECSCCCCCSTTBCCCCTTCEEEEE--EECSSSEEEEEECSCCSSCCEEEEETTSEEECCSCC
T ss_pred             CCCEEEECcCCCCCCCCEeeEcCCCEEEEE--EEeCCCeEEEEEccCCCCCCEeEEEheeEEECCCCC
Confidence            356899999999999999999999999996  4467899999864     458999999999987543

>d1arka_ b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3 domain from nebulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=7.4e-15  Score=102.52  Aligned_cols=56  Identities=36%  Similarity=0.799  Sum_probs=50.1

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe--eCceeeecccceeec
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPC  226 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~--~g~~G~fP~~yve~~  226 (336)
                      +..++|+|||.++.++||+|++||+|.|+.  ..+++||.+++  +|+.|+||+|||+.+
T Consensus         3 G~~~rAl~df~~~~~~eLs~~~Gd~i~v~~--~~~~~W~~~~~~~~g~~G~vP~nyve~i   60 (60)
T d1arka_           3 GKIFRAMYDYMAADADEVSFKDGDAIINVQ--AIDEGWMYGTVQRTGRTGMLPANYVEAI   60 (60)
T ss_dssp             CCCEECCSCCCCSSSSBCCCCTTCEECCSE--ECSSSEEEEECTTTCCEEEEETTTCEEC
T ss_pred             CcEEEECccCCCCCCCCcCCCCCCEEEEEE--EcCCCEEEEEECCCCCEEEEcHHHEEEC
Confidence            567899999999999999999999999963  46789999986  589999999999875

>d1uhfa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=1.5e-14  Score=103.63  Aligned_cols=57  Identities=33%  Similarity=0.704  Sum_probs=51.4

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|+|.++.++||+|++||+|.|+..   +++||+++++|+.||||++||++++.
T Consensus         8 ~~~~vAl~~y~~~~~~eLs~~~Gd~v~vl~~---~~~Ww~~~~~g~~G~vP~~yv~~~~~   64 (69)
T d1uhfa_           8 GEEYIALYPYSSVEPGDLTFTEGEEILVTQK---DGEWWTGSIGDRSGIFPSNYVKPKDS   64 (69)
T ss_dssp             SEEEECSSCBCCSSSSBCCBCTTCEEEECEE---ETTEEEECSTTCCEEECGGGCEECCC
T ss_pred             CcEEEECccCCCCCcCCcCCCCCCEEEEEEe---cCCEEEEEECCcEEEEchhhEEECCC
Confidence            4689999999999999999999999999743   45899999999999999999999863

>d1ug1a_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein Baa76854.1 (KIAA1010)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=4.7e-14  Score=106.90  Aligned_cols=61  Identities=16%  Similarity=0.255  Sum_probs=52.8

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeec--CCCCeEEEEeeCceeeecccceeecCCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQN--AEPGWLAGELRGQTGWFPESYVEPCDET  229 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~--~~~gW~~g~~~g~~G~fP~~yve~~~~~  229 (336)
                      ...++|+|+|+++.++||+|++||+|.|++..+  .+.+||+++.+|++||||+|||+++.+.
T Consensus        17 ~~~~~a~~~f~a~~~~eLs~~~Gd~v~vl~~~d~~~~~~Ww~~~~~g~~G~~P~~yv~~~~~~   79 (92)
T d1ug1a_          17 EKLFQAERNFNAAQDLDVSLLEGDLVGVIKKKDPMGSQNRWLIDNGVTKGFVYSSFLKPYNPR   79 (92)
T ss_dssp             GGEEEESSCCCCCSSSCCCCCTTCEEEEEESCCTTSCSSEEEEECSSSEEEEEGGGEEECCCC
T ss_pred             CeEEEEcCCcCCCCCCeEEEecccEEEEEEcccccccCCceEEEecccEEEEEhhhceecCCc
Confidence            457899999999999999999999999975322  2478999999999999999999998743

>d2rn8a1 b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus musculus [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Mus musculus [TaxId: 10090]

Probab=99.48  E-value=1.7e-14  Score=97.99  Aligned_cols=52  Identities=21%  Similarity=0.464  Sum_probs=46.6

Q ss_pred             eeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEE-eeCceeeecccceee
Q psy7077         172 YRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE-LRGQTGWFPESYVEP  225 (336)
Q Consensus       172 ~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~-~~g~~G~fP~~yve~  225 (336)
                      ++|+|+|.++.++||+|++||+|.|+  .+.+++||.++ .+|+.||||+|||++
T Consensus         1 V~Alydy~a~~~~eLs~~~Gd~~~vl--~~~~~~Ww~~~~~~g~~G~vP~~yv~e   53 (53)
T d2rn8a1           1 VIALYDYQTNDPQELALRCDEEYYLL--DSSEIHWWRVQDKNGHEGYAPSSYLVE   53 (53)
T ss_dssp             EEESSCCCCSSTTBCCCCTTCEEEEC--CCSCSSCEEEECTTSCEEEECGGGEEE
T ss_pred             CEEeeeECCCCCCeeeECCCCEEEEe--EEcCCCeEEEEeCCCCEEEEeHHHEeC
Confidence            47999999999999999999999996  45788999998 468999999999974

>d1ckaa_ b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: C-Crk, N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.48  E-value=2.2e-14  Score=99.01  Aligned_cols=54  Identities=31%  Similarity=0.685  Sum_probs=48.6

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe-eCceeeecccceee
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL-RGQTGWFPESYVEP  225 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~-~g~~G~fP~~yve~  225 (336)
                      ..++|+|||.++.+++|+|++||+|.|+  .+.+++||.|+. +|+.|+||++||++
T Consensus         2 ~~v~Alydy~~~~~~eLs~~~Gd~i~v~--~~~~~~Ww~~~~~~g~~G~vP~~yve~   56 (57)
T d1ckaa_           2 EYVRALFDFNGNDEEDLPFKKGDILRIR--DKPEEQWWNAEDSEGKRGMIPVPYVEK   56 (57)
T ss_dssp             CEEEESSCBCCSSTTBCCBCTTCEEEEE--ECSSSSEEEEECTTSCEEEEEGGGEEC
T ss_pred             CEEEECCCCCcCCcCCcCCCCCCEEEEE--EEcCCCeEEEEECCCCEEEEcHHHeEE
Confidence            3578999999999999999999999995  457889999985 68999999999986

>d1uhca_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein Baa76854.1 (KIAA1010)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=3e-14  Score=104.97  Aligned_cols=60  Identities=25%  Similarity=0.556  Sum_probs=52.3

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeee--cCCCCeEEEEeeCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQ--NAEPGWLAGELRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~--~~~~gW~~g~~~g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|+|.++.++||+|++||+|.|++..  ..+++||.++.+|+.||||++||++++.
T Consensus        13 ~~~~~Alydy~a~~~~ELs~~~Gd~i~vl~~~~~~~~~~W~~g~~~g~~G~vP~~yv~~~~~   74 (79)
T d1uhca_          13 NQVYFAVYTFKARNPNELSVSANQKLKILEFKDVTGNTEWWLAEVNGKKGYVPSNYIRKTES   74 (79)
T ss_dssp             SCCEEESSCBCCCSSSBCCBCTTCEEEEEESCCTTSCTTEEEEESSSCEEEEEGGGEEECCS
T ss_pred             CEEEEECccCCCCCCCCccCCCCCEEEEEEeecCCCCCCEEEEEECCCEEEEehhhEEECCC
Confidence            35789999999999999999999999997432  2357899999999999999999999874

>d1k9aa1 b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=4.8e-14  Score=101.72  Aligned_cols=59  Identities=24%  Similarity=0.539  Sum_probs=51.3

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEee-CceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELR-GQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~-g~~G~fP~~yve~~~~  228 (336)
                      ...|+|+|+|.++.++||+|++||+|.|+. ...+++||.++.+ |+.||||++||+.+..
T Consensus         6 g~~~~Alydy~a~~~~ELs~~~Gd~i~vl~-~~~~~~W~~~~~~~g~~G~~P~~yve~~~~   65 (71)
T d1k9aa1           6 GTECIAKYNFHGTAEQDLPFCKGDVLTIVA-VTKDPNWYKAKNKVGREGIIPANYVQKREG   65 (71)
T ss_dssp             TCEEEESSCBCCSSSSBCCBCTTCEEEEEE-ECSSTTEEEEECTTCCEEEEEGGGEEECCC
T ss_pred             CCEEEEccCCCCCCCCCccCCCCCEEEEeE-eccCCCEEEEEeCCCCEEEEchHHeEEccc
Confidence            467999999999999999999999999974 3456789999874 8999999999998763

>d1ng2a2 b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=3.8e-14  Score=112.50  Aligned_cols=58  Identities=28%  Similarity=0.511  Sum_probs=53.2

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~~G~fP~~yve~~~~  228 (336)
                      +..++|+|+|.++.++||+|++||+|.|+  ...++|||.|+.+|+.||||++||+.+..
T Consensus        14 g~~~~alydy~a~~~dELs~~~Gd~i~Vl--~~~~~gWw~g~~~g~~G~~P~~yv~~~~~   71 (118)
T d1ng2a2          14 GEPYVAIKAYTAVEGDEVSLLEGEAVEVI--HKLLDGWWVIRKDDVTGYFPSMYLQKSGQ   71 (118)
T ss_dssp             CEEEEESSCBCCCSTTBCCBCTTCEEEEE--ECCTTSEEEEEETTEEEEEEGGGEEETTS
T ss_pred             CcEEEECcCCCCCCCCEecCCCCCEEEEe--EecCCCeEEEEECCeEEEEehhhEEECCC
Confidence            46789999999999999999999999996  45788999999999999999999998764

>d2v1ra1 b.34.2.1 (A:10-76) Peroxisomal membrane protein Pex13p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Peroxisomal membrane protein Pex13p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.46  E-value=3e-14  Score=101.58  Aligned_cols=58  Identities=28%  Similarity=0.634  Sum_probs=48.6

Q ss_pred             ceeeeeeeecccCCCC-CCCCCCCCEEEEeeeec---CCCCeEEEEe-eCceeeecccceeec
Q psy7077         169 YRRYRAIYEFVSRNGD-ELSFQPGDIIMVPVKQN---AEPGWLAGEL-RGQTGWFPESYVEPC  226 (336)
Q Consensus       169 ~~~~~al~df~a~~~~-eLs~~~Gdii~v~~~~~---~~~gW~~g~~-~g~~G~fP~~yve~~  226 (336)
                      ...++|+|+|.++.++ ||+|++||+|.|++...   .+.|||.|+. +|+.|+||+|||+.+
T Consensus         5 ~~~~~Alydy~~~~~~~ELs~~~Gd~i~vl~~~d~~~~~~~Ww~g~~~~G~~G~~P~nyve~i   67 (67)
T d2v1ra1           5 LEFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEII   67 (67)
T ss_dssp             CEEEEESSCBCCSSTTTBCCBCTTCEEEEEEEECTTSCEEEEEEEECTTSCEEEEEGGGEEEC
T ss_pred             CEEEEECccCCCCCCCCEeCCCCCCEEEEEEeecCCCcCCCeEEEEeCCCCEEEEEHHHEEEC
Confidence            4679999999998765 99999999999975422   2358999986 799999999999874

>d1awwa_ b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=1.5e-14  Score=103.17  Aligned_cols=59  Identities=24%  Similarity=0.625  Sum_probs=52.3

Q ss_pred             cceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe-eCceeeecccceeecCC
Q psy7077         168 EYRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL-RGQTGWFPESYVEPCDE  228 (336)
Q Consensus       168 ~~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~-~g~~G~fP~~yve~~~~  228 (336)
                      ...+++|+|+|.++.++||+|++||+|.|+  ...+.+||.++. +|+.||||++||+.+.+
T Consensus         7 ~~~~v~Alydy~a~~~~eLs~~~Gd~i~v~--~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   66 (67)
T d1awwa_           7 ELKKVVALYDYMPMNANDLQLRKGDEYFIL--EESNLPWWRARDKNGQEGYIPSNYVTEAED   66 (67)
T ss_dssp             CCCEEEBSSCCCCSSSSSCCCCSSCEEECC--CCCSSSEECCBCTTSCBCCEETTTBCCSCC
T ss_pred             CCEEEEECcCCCCCCcCCcCCCCCCEEEEE--EEcCCCeEEEEECCCCEEEEcHHHeEECcC
Confidence            456899999999999999999999999995  456789999985 78999999999998764

>d1efna_ b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Fyn proto-oncogene tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=5.9e-14  Score=96.81  Aligned_cols=54  Identities=30%  Similarity=0.706  Sum_probs=47.9

Q ss_pred             eeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe--eCceeeecccceeec
Q psy7077         171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPC  226 (336)
Q Consensus       171 ~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~--~g~~G~fP~~yve~~  226 (336)
                      .++|+|||.++.++||+|++||+|.|+  .+.+++||.++.  +|+.||||+|||+++
T Consensus         2 l~vAl~dy~a~~~~eLs~~~Gd~i~v~--~~~~~~Ww~~~~~~~g~~G~vP~~yv~pv   57 (57)
T d1efna_           2 LFVALYDYEAITEDDLSFHKGEKFQIL--NSSEGDWWEARSLTTGETGYIPSNYVAPV   57 (57)
T ss_dssp             EEEESSCBCCSSTTBCCBCTTCEEEEE--ECSSCSEEEEEETTTTEEEEEEGGGEEEC
T ss_pred             EEEECCCCCCCCcCCcCCCCCCEEEEE--EecCCCCEEEEECCCCCEEEEeHHHeEEC
Confidence            467999999999999999999999995  457778999985  689999999999874

>d1gl5a_ b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: tyrosine kinase tec
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.44  E-value=6e-14  Score=100.02  Aligned_cols=58  Identities=19%  Similarity=0.457  Sum_probs=50.8

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe-eCceeeecccceeecCCC
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL-RGQTGWFPESYVEPCDET  229 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~-~g~~G~fP~~yve~~~~~  229 (336)
                      ..++|+|+|.++.++||+|++||+|.|+  ...+.+||.++. +|+.||||++||+.+...
T Consensus         3 ~~v~Alydf~a~~~~eLs~~~Gd~i~v~--~~~~~~Ww~~~~~~g~~G~~P~~yV~~~~~~   61 (67)
T d1gl5a_           3 EIVVAMYDFQATEAHDLRLERGQEYIIL--EKNDLHWWRARDKYGSEGYIPSNYVTGKKSN   61 (67)
T ss_dssp             SCEEECSCBCCSSSSBCCBCTTCEEEEE--ECSSSSEEEEECSSSCEEEEETTSEESSTTT
T ss_pred             EEEEECCCCCCCCcCCcCCCCCCEEEEE--EecCCCcEEEEECCCCEEEEEhHHeEEecCC
Confidence            4688999999999999999999999996  456788999974 689999999999987643

>d1utia_ b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona/Gads) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Grb2-related adaptor protein 2 (Mona/Gads)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.43  E-value=8e-14  Score=96.06  Aligned_cols=39  Identities=36%  Similarity=0.711  Sum_probs=37.0

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeec
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPC  316 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i  316 (336)
                      |+|++||+|.|+++.+++||.|+.+|++|+||+|||+++
T Consensus        18 Ls~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yve~i   56 (57)
T d1utia_          18 LGFRSGEVVEVLDSSNPSWWTGRLHNKLGLFPANYVAPM   56 (57)
T ss_dssp             CCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEEC
T ss_pred             cCCCCCCEEEEeEEcCCCEEEEEECCcEEEEEHHHEEEc
Confidence            559999999999999999999999999999999999976

>d1phta_ b.34.2.1 (A:) Phosphatidylinositol 3-kinase (p85-alpha subunit, pi3k), SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phosphatidylinositol 3-kinase (p85-alpha subunit, pi3k), SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=1.6e-14  Score=107.24  Aligned_cols=60  Identities=33%  Similarity=0.642  Sum_probs=51.5

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeee-------------cCCCCeEEEEe--eCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQ-------------NAEPGWLAGEL--RGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~-------------~~~~gW~~g~~--~g~~G~fP~~yve~~~~  228 (336)
                      +.+++|+|+|.++.++||+|++||+|.|+...             ..++|||.|++  +|++||||+|||+.+..
T Consensus         3 G~~~raly~y~~~~~~eLs~~~Gd~i~V~~~~~~~~~~~~~~~~~~~~~GW~~G~~~~~g~~G~FP~nYVe~i~~   77 (83)
T d1phta_           3 GYQYRALYDYKKEREEDIDLHLGDILTVNKGSLVALGFSDGQEARPEEIGWLNGYNETTGERGDFPGTYVEYIGR   77 (83)
T ss_dssp             EEEEEECSCBCCSSTTBCCBCTTCEEEEEHHHHHTTTCCTTGGGCHHHHCEEEEEETTTTEEEEEEGGGEEEEEE
T ss_pred             CCEEEEcCccCCCCCCcccccCCCEEEEEeccccccccccccccccCCCCeEEEEECCCCcEeeEehhhEEEcCC
Confidence            56899999999999999999999999996421             12468999986  68999999999999874

>d1u06a1 b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: alpha-Spectrin, SH3 domain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.43  E-value=8.9e-14  Score=95.13  Aligned_cols=39  Identities=21%  Similarity=0.505  Sum_probs=36.9

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeec
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPC  316 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i  316 (336)
                      |+|++||+|.|+++.+++||.|+.+|++||||+|||+++
T Consensus        17 Ls~~~Gd~v~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~i   55 (55)
T d1u06a1          17 VTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKL   55 (55)
T ss_dssp             CCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEEC
T ss_pred             ccCCCCCEEEEeEEcCCCEEEEEECCeEEEEeHHHEEEC
Confidence            559999999999999999999999999999999999975

>d1wfwa_ b.34.2.1 (A:) Kalirin-9a {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Kalirin-9a
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.43  E-value=8.8e-14  Score=101.14  Aligned_cols=58  Identities=16%  Similarity=0.300  Sum_probs=51.2

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe------eCceeeecccceeecCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL------RGQTGWFPESYVEPCDE  228 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~------~g~~G~fP~~yve~~~~  228 (336)
                      ...++|+|||.++.++||+|++||+|.|+  +..+++||.++.      +|++||||++||+++..
T Consensus         7 g~~~~al~dy~~~~~~eLs~~~Gd~i~vl--~~~~~~Ww~v~~~~~~~~~g~~G~vP~~yve~~~~   70 (74)
T d1wfwa_           7 GSTMTVIKDYYALKENEICVSQGEVVQVL--AVNQQNMCLVYQPASDHSPAAEGWVPGSILAPFSG   70 (74)
T ss_dssp             SCEEECCSCBCCCSSSCCCBCTTCEEEEE--EECTTSEEEEEECSCSSSSSEEEEEEGGGCCBCCS
T ss_pred             CCEEEEeEEECCCCCCCccCccCCEEEEE--EEcCCCCEEEEeCccCCcCCeeeEEchHHeEECCC
Confidence            56899999999999999999999999996  457889999975      36899999999998874

>d1gcqa_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=1.1e-13  Score=95.11  Aligned_cols=39  Identities=38%  Similarity=0.766  Sum_probs=36.8

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeec
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPC  316 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i  316 (336)
                      |+|++||+|.|+++.+++||.|+.+|++|+||+|||+++
T Consensus        18 Ls~~~Gd~i~v~~~~~~~W~~g~~~g~~G~~P~~yv~~v   56 (56)
T d1gcqa_          18 LGFRRGDFIHVMDNSDPNWWKGACHGQTGMFPRNYVTPV   56 (56)
T ss_dssp             CCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEEC
T ss_pred             cCCCCCCEEEEEEecCCCEEEEEECCeEEEEEHhHEEEC
Confidence            559999999999999999999999999999999999975

>d1k4us_ b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p67phox
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=8.6e-14  Score=97.58  Aligned_cols=54  Identities=24%  Similarity=0.445  Sum_probs=45.7

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD  317 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~  317 (336)
                      ..|.+++.+...++                 |+|++||+|.|+++.+++||.|+.+|++||||+|||+.+.
T Consensus         8 v~Aly~y~a~~~~e-----------------Lsf~~Gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~yVe~~~   61 (62)
T d1k4us_           8 VEALFSYEATQPED-----------------LEFQEGDIILVLSKVNEEWLEGESKGKVGIFPKVFVEDSA   61 (62)
T ss_dssp             EECCSCBCCCSSSB-----------------CCBCSSCEEEEEEESSSSCEEEECSSCEEEECGGGCCCSC
T ss_pred             EEECCCCCCCCcCC-----------------cCCCCCCEEEEeEEcCCCEEEEEECCcEEEEchHHeEECC
Confidence            45666776666555                 4599999999999999999999999999999999998764

>d1fmka1 b.34.2.1 (A:82-145) c-src protein tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: c-src protein tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=1.2e-13  Score=97.60  Aligned_cols=56  Identities=36%  Similarity=0.767  Sum_probs=49.6

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe--eCceeeecccceeecC
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPCD  227 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~--~g~~G~fP~~yve~~~  227 (336)
                      ..++|+|||.++.++||+|++||+|.|+  ...+++||.++.  +|+.||||++||++++
T Consensus         3 ~~~vAlydf~~~~~~eLs~~~Gd~i~v~--~~~~~~Ww~~~~~~~g~~G~vP~~yv~~~~   60 (64)
T d1fmka1           3 TTFVALYDYESRTETDLSFKKGERLQIV--NNTEGDWWLAHSLSTGQTGYIPSNYVAPSD   60 (64)
T ss_dssp             EEEEESSCBCCCSSSBCCBCTTCEEEES--CCCSSSEEEEEETTTCCEEEEEGGGEEETT
T ss_pred             eEEEECccCCCcCcCCcCCCCCCEEEEE--EEcCCCcEEEEECCCCCEEEEehHHeEECc
Confidence            4578999999999999999999999996  456778999986  5799999999999875

>d1oota_ b.34.2.1 (A:) Hypothetical protein YFR024c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein YFR024c
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.41  E-value=1.4e-13  Score=95.18  Aligned_cols=54  Identities=26%  Similarity=0.510  Sum_probs=45.7

Q ss_pred             cccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeec--CCCeEEEEeCCceeEeeCCCeeec
Q psy7077         246 ELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNA--EPGWLAGELRGQTGWFPESYVEPC  316 (336)
Q Consensus       246 ~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~--~~~W~~g~~~G~~G~fPsnyV~~i  316 (336)
                      .++|.+++.+.+.++++                 |++||+|.|+++.  ++|||.++.+|++||||+|||++|
T Consensus         3 ~~~Alydy~a~~~~ELs-----------------~~~Gd~v~vl~~~~~~~~W~~~~~~g~~G~vP~~yve~i   58 (58)
T d1oota_           3 KAVALYSFAGEESGDLP-----------------FRKGDVITILKKSDSQNDWWTGRVNGREGIFPANYVELV   58 (58)
T ss_dssp             EEEESSCBCCCSTTBCC-----------------BCTTCEEEEEECCSCTTSEEEEEETTEEEEEEGGGEEEC
T ss_pred             eEEEccCCCCCCCCCcc-----------------CCCCCEEEEEEeecCCCCEEEEEECCcEEEEcHHHEEEC
Confidence            35677778777766654                 9999999999886  468999999999999999999976

>d1wlpb1 b.34.2.1 (B:229-281) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=1.5e-13  Score=93.21  Aligned_cols=37  Identities=27%  Similarity=0.454  Sum_probs=35.1

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCee
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVE  314 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~  314 (336)
                      |+|.+||+|.|+++.++|||.|+.+|+.||||+|||+
T Consensus        17 Ls~~~Gd~v~vl~~~~~gWw~g~~~g~~G~~P~~yve   53 (53)
T d1wlpb1          17 VSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQ   53 (53)
T ss_dssp             CCBCTTCEEEEEECCTTSSEEEESSSCEEEECSTTEE
T ss_pred             ecCCCCCEEEEEeecCCceEEEEECCcEeEecHHhCC
Confidence            5599999999999999999999999999999999996

>d1gcqc_ b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Vav N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.40  E-value=1.8e-13  Score=97.87  Aligned_cols=57  Identities=30%  Similarity=0.620  Sum_probs=46.2

Q ss_pred             ceeeeeeeecc------cCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe--eCceeeecccceeec
Q psy7077         169 YRRYRAIYEFV------SRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPC  226 (336)
Q Consensus       169 ~~~~~al~df~------a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~--~g~~G~fP~~yve~~  226 (336)
                      .++++|+++|.      ++..+||+|++||+|.|++ ...++|||.|++  +|+.||||+|||++.
T Consensus         4 ~Pk~~a~~~y~~~~~~~~~~~~eLsf~~GD~i~Vl~-~~~~~gWw~G~~~~~g~~G~fP~nyVePy   68 (69)
T d1gcqc_           4 MPKMEVFQEYYGIPPPPGAFGPFLRLNPGDIVELTK-AEAEHNWWEGRNTATNEVGWFPCNRVHPY   68 (69)
T ss_dssp             CCEEEECSCBSSSSCCGGGCSCBCCBCTTCEEEEEE-CCTTCSEEEEEETTTTEEEEEEGGGEEEC
T ss_pred             CCcEEEeeeEeccCCCCCCCCCEeeEcCCCEEEEEE-EecCCCEEEEEECCCCCEEEEeHHHEEEc
Confidence            34566666665      4788999999999999963 345679999997  589999999999975

>d1sema_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Caenorhabditis elegans, SEM-5 [TaxId: 6239]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Caenorhabditis elegans, SEM-5 [TaxId: 6239]

Probab=99.40  E-value=1.9e-13  Score=94.41  Aligned_cols=40  Identities=30%  Similarity=0.715  Sum_probs=37.3

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD  317 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~  317 (336)
                      |+|++||+|.|+++.+++||.|+.+|++|+||+|||++++
T Consensus        19 Lsf~~Gd~i~v~~~~~~~W~~g~~~g~~G~~P~~yvep~n   58 (58)
T d1sema_          19 LAFKRGDVITLINKDDPNWWEGQLNNRRGIFPSNYVCPYN   58 (58)
T ss_dssp             CCBCTTCEEEEEECSSSSEEEEEETTEEEEEEGGGEEECC
T ss_pred             cCCCCCCEEEEeEEcCCCEEEEEECCeEEEEEhhhEEECc
Confidence            5599999999999999999999999999999999999763

>d1zuua1 b.34.2.1 (A:2-57) BZZ1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BZZ1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.40  E-value=1.3e-13  Score=94.78  Aligned_cols=54  Identities=28%  Similarity=0.686  Sum_probs=44.5

Q ss_pred             eeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe--eCceeeecccceee
Q psy7077         171 RYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL--RGQTGWFPESYVEP  225 (336)
Q Consensus       171 ~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~--~g~~G~fP~~yve~  225 (336)
                      .++|+|||.++.++||+|++||+|.|++. ...++||.++.  +|++||||+|||+.
T Consensus         1 ~aralydf~a~~~~ELs~~~Gd~i~v~~~-~~~~~w~~~~~~~~g~~G~~P~nyvev   56 (56)
T d1zuua1           1 ENKVLYAYVQKDDDEITITPGDKISLVAR-DTGSGWTKINNDTTGETGLVPTTYIRI   56 (56)
T ss_dssp             CCEECSCBCCCSTTBCCBCTTCCEEEEEC-CSSSSEEEEEETTTTEEEEEEGGGEEC
T ss_pred             CCEEeeeeCCCCCCEeeECCCCEEEEEEE-ecCCCcEEEeCCCCceEEEEehhhEEC
Confidence            36899999999999999999999999642 34456676653  68999999999973

>d1ujya_ b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Rac/CDC42 GEF 6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=1e-13  Score=101.22  Aligned_cols=57  Identities=28%  Similarity=0.569  Sum_probs=48.0

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETG  320 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~~  320 (336)
                      ..|.++|.+...++                 |+|++||+|.|+++.+++||.|+.+|++||||+|||+++.+..
T Consensus        13 ~rAlydy~a~~~~e-----------------Ls~~~Gd~i~v~~~~~~~W~~g~~~g~~G~~P~~yv~~i~~~~   69 (76)
T d1ujya_          13 VKARFNFKQTNEDE-----------------LSVCKGDIIYVTRVEEGGWWEGTLNGRTGWFPSNYVREIKSSE   69 (76)
T ss_dssp             EECCSCBCCSSTTS-----------------CCBCSSCCEEESSCCSSSCEEEEETTEEEEECTTTSEECCHHH
T ss_pred             EEECccCCCCCCCC-----------------ccCCCCCEEEEeEEcCCCEEEEEECCcEEEEchHHEEECCCCC
Confidence            34566777666655                 4599999999999999999999999999999999999997543

>d1ng2a1 b.34.2.1 (A:157-214) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=8.8e-14  Score=96.24  Aligned_cols=40  Identities=35%  Similarity=0.821  Sum_probs=37.5

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCD  317 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~  317 (336)
                      |+|++||+|.|+++.++|||.|+.+|+.||||+|||++++
T Consensus        19 Ls~~~Gd~i~vl~~~~~~Ww~~~~~g~~G~~P~~yve~ld   58 (58)
T d1ng2a1          19 MALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLD   58 (58)
T ss_dssp             CCBCTTCEEEEEECCTTSCCEEEECCCCCCCCGGGCCCSS
T ss_pred             cCCCCCCEEEEEEecCCCeEEEEECCCCcEEcHhHEEECc
Confidence            5599999999999999999999999999999999999874

>d1gria1 b.34.2.1 (A:1-56) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=1.2e-13  Score=94.80  Aligned_cols=53  Identities=25%  Similarity=0.505  Sum_probs=41.0

Q ss_pred             cccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEee-cCCCeEEEEeCCceeEeeCCCeee
Q psy7077         246 ELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQN-AEPGWLAGELRGQTGWFPESYVEP  315 (336)
Q Consensus       246 ~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~-~~~~W~~g~~~G~~G~fPsnyV~~  315 (336)
                      +++|.|++.+...++|                 +|++||+|.|+.+ .++|||.|+.+|++||||+|||++
T Consensus         2 ~a~Alydy~a~~~~EL-----------------s~~~Gd~v~v~~~~~~~~W~~~~~~g~~G~vP~nyvev   55 (56)
T d1gria1           2 EAIAKYDFKATADDEL-----------------SFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEM   55 (56)
T ss_dssp             EEEECSCBCCCSSSCC-----------------CBCTTCEEEC------CCEEEEESSSCEEEEEGGGEEC
T ss_pred             EEEEeeCCCCCCCCCc-----------------CCCCCCEEEEEeccCCCCeEEEEECCcEEEEehhhEEE
Confidence            4577788877766664                 4999999998876 468999999999999999999974

>d2hspa_ b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phospholipase C, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=5e-14  Score=101.60  Aligned_cols=59  Identities=31%  Similarity=0.643  Sum_probs=50.5

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEeeCc-eeeecccceeecCCC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGELRGQ-TGWFPESYVEPCDET  229 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~~g~-~G~fP~~yve~~~~~  229 (336)
                      ...++|+|+|.++.++||+|++||+|.|+  ++.+++||.|+++++ .||||+|||+++...
T Consensus         6 ~~~v~Aly~f~a~~~~eLsf~~Gd~i~v~--~~~~~~Ww~g~~~~~~~G~fP~~yv~~~~~~   65 (71)
T d2hspa_           6 KCAVKALFDYKAQREDELTFIKSAIIQNV--EKQEGGWWRGDYGGKKQLWFPSNYVEEMVNP   65 (71)
T ss_dssp             SSCEECCSCCCCSSSSSCCCCTTCEEBSC--CCBTTTEECCBCSSCCSCCEETTTCCSCSCC
T ss_pred             cEEEEEcccCCcCCcCCccCCCCCEEEEE--EecCCCEEEEEECCeEEEEEchHHeEEcCCc
Confidence            35689999999999999999999999996  456789999997554 569999999988754

>d1j3ta_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=5.2e-13  Score=96.89  Aligned_cols=58  Identities=26%  Similarity=0.466  Sum_probs=46.4

Q ss_pred             ccccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCCC
Q psy7077         245 LELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDETG  320 (336)
Q Consensus       245 ~~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~~  320 (336)
                      ..+.+.++|.+...++|                 +|++||+|.|+++.+ +||.++.+|++||||+|||+++....
T Consensus        11 ~~~~alydy~a~~~~EL-----------------s~~~Gd~i~vl~~~~-~ww~g~~~g~~G~fP~~yve~i~~~~   68 (74)
T d1j3ta_          11 LKAQALCSWTAKKDNHL-----------------NFSKHDIITVLEQQE-NWWFGEVHGGRGWFPKSYVKIIPGSE   68 (74)
T ss_dssp             CEEEESSCBCCCSTTBC-----------------CBCTTCEEEEEEECS-SEEEEESTTCCCEEEGGGEEECCCST
T ss_pred             eEEEEccCCCCCCCCEe-----------------cCCCCCEEEEEEccC-CeEEEEECCcEEEEchhhEEECCCCC
Confidence            44567777777766654                 499999999999865 56668899999999999999997543

>d1i07a_ b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: EPS8 SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.38  E-value=1.5e-13  Score=95.40  Aligned_cols=56  Identities=23%  Similarity=0.506  Sum_probs=48.9

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEE-eeCceeeecccceeecCC
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGE-LRGQTGWFPESYVEPCDE  228 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~-~~g~~G~fP~~yve~~~~  228 (336)
                      ..++|+|||.++.++||+|.+||+|.|++  . .++||.++ .+|+.|+||+|||+.+.+
T Consensus         2 ~~a~alydf~a~~~~ELs~~~Gd~i~v~~--~-~~~ww~~~~~~g~~G~~P~nyve~i~~   58 (59)
T d1i07a_           2 KYAKSKYDFVARNSSELSVMKDDVLEILD--D-RRQWWKVRNASGDSGFVPNNILDIMRT   58 (59)
T ss_dssp             CEEEESSCBCCSSTTBCCBCTTCEEEECG--G-GCCEEEEECTTSCEEEEEGGGEEEECC
T ss_pred             eEEEEccCCCCCCCCeeeEcCCCEEEEEE--E-cCCcEEEEEcCCCEEEECHHHeEECCC
Confidence            46899999999999999999999999963  2 45799887 478999999999999864

>d1ugva_ b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA0621) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Olygophrenin-1 like protein (KIAA0621)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=2.4e-13  Score=98.23  Aligned_cols=56  Identities=34%  Similarity=0.498  Sum_probs=46.1

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeec-CCCeEEEEeCCceeEeeCCCeeecCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNA-EPGWLAGELRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~-~~~W~~g~~~G~~G~fPsnyV~~i~~~  319 (336)
                      +.+.++|.+...++                 |+|++||+|+|+++. ++|||.++.+|++|+||+|||++++.+
T Consensus        13 ~~alydy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~~W~~g~~~g~~G~~P~~yve~i~~p   69 (72)
T d1ugva_          13 AKALYACKAEHDSE-----------------LSFTAGTVFDNVHPSQEPGWLEGTLNGKTGLIPENYVEFLSGP   69 (72)
T ss_dssp             EEESSCBCCCSSSB-----------------CCBCTTCEEBSCCBCSSTTEEEEESSSCEEEEEGGGEEECCSS
T ss_pred             EEEcccCCCCCCCE-----------------ecCCCCCEEEEeeccCCCCEEEEEeCCCEEEEchHHEEECCCC
Confidence            45666776666555                 459999999998875 568999999999999999999999754

>d1uj0a_ b.34.2.1 (A:) Signal transducing adaptor molecule Stam2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Signal transducing adaptor molecule Stam2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.38  E-value=2.7e-13  Score=93.66  Aligned_cols=38  Identities=26%  Similarity=0.595  Sum_probs=35.7

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeee
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEP  315 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~  315 (336)
                      |+|++||+|.|+++.+++||.|+.+|++||||+|||+.
T Consensus        19 Lsf~~Gd~i~v~~~~~~~W~~g~~~g~~G~~P~~yV~~   56 (58)
T d1uj0a_          19 LTFKHGELITVLDDSDANWWQGENHRGTGLFPSNFVTT   56 (58)
T ss_dssp             CCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEES
T ss_pred             cCCCCCCEEEEeEEeCCCEEEEEECCeEEEEehHhEee
Confidence            55999999999999999999999999999999999984

>d1bb9a_ b.34.2.1 (A:) Amphiphysin 2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Amphiphysin 2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.38  E-value=3e-13  Score=100.44  Aligned_cols=59  Identities=29%  Similarity=0.571  Sum_probs=49.7

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeee---cCCCCeEEEEe----------eCceeeecccceeecC
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQ---NAEPGWLAGEL----------RGQTGWFPESYVEPCD  227 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~---~~~~gW~~g~~----------~g~~G~fP~~yve~~~  227 (336)
                      ..+++|+|+|+++.++||+|++||+|.|+...   ..++|||.|+.          +|+.||||+|||+.+.
T Consensus        12 ~~~~~Alydy~a~~~~ELs~~~Gd~i~Vl~~~~~~~~~dgWw~G~~~~~~~~~~~~~g~~G~fP~nyVe~ie   83 (83)
T d1bb9a_          12 MFKVQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVFPENFTERVQ   83 (83)
T ss_dssp             CEEEEESSCBCCSSTTBCCBCTTCEEEEECCSCGGGCCTTEEEEEEHHHHHTTCCHHHHCEEEEGGGEEEEC
T ss_pred             CEEEEEceeECCCCCCEecCcCCCEEEEEEccCCCcccCCEeEEEecCCccccccCCCCEEEEchhHeEEcC
Confidence            45799999999999999999999999997532   23578999975          3679999999999863

>d1qcfa1 b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hemapoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=4.7e-13  Score=94.71  Aligned_cols=55  Identities=27%  Similarity=0.535  Sum_probs=47.8

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe--eCceeeecccceeecC
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPCD  227 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~--~g~~G~fP~~yve~~~  227 (336)
                      ..++|+|||.++.++||+|++||+|.|++   .+++||.++.  +|+.||||+|||++++
T Consensus         5 ~~vvAlydy~~~~~~eLs~~~Gd~i~v~~---~~~~ww~~~~~~~g~~G~vP~~yv~~~~   61 (65)
T d1qcfa1           5 IIVVALYDYEAIHHEDLSFQKGDQMVVLE---ESGEWWKARSLATRKEGYIPSNYVARVD   61 (65)
T ss_dssp             CEEEESSCBCCCSTTBCCBCTTCEEEEEE---CCTTEEEEEETTTCCEEEEEGGGEEETT
T ss_pred             EEEEECCcCCCCCcCccCCCCCCEEEEEE---ECCCCEEEEEccCCCEEEEchHHeEECc
Confidence            46789999999999999999999999963   3567888874  6899999999999876

>d1wiea_ b.34.2.1 (A:) RIM binding protein 2, RIMBP2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: RIM binding protein 2, RIMBP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=3.6e-13  Score=102.59  Aligned_cols=61  Identities=26%  Similarity=0.450  Sum_probs=50.0

Q ss_pred             cceeeeeeeecccCC------CCCCCCCCCCEEEEeeeecCCCCeEEEEe-eCceeeecccceeecCCC
Q psy7077         168 EYRRYRAIYEFVSRN------GDELSFQPGDIIMVPVKQNAEPGWLAGEL-RGQTGWFPESYVEPCDET  229 (336)
Q Consensus       168 ~~~~~~al~df~a~~------~~eLs~~~Gdii~v~~~~~~~~gW~~g~~-~g~~G~fP~~yve~~~~~  229 (336)
                      ....|+|+|||+++.      .+||+|++||+|.|+. ..+.++||.++. +|++||||+|||+++...
T Consensus        16 ~~~~~~Alydy~~~~~~~~~~e~ELsf~~Gd~i~v~~-~~~~~gW~~~~~~~G~~G~~P~nyve~~~~~   83 (96)
T d1wiea_          16 KVHLCVARYSYNPFDGPNENPEAELPLTAGKYLYVYG-DMDEDGFYEGELLDGQRGLVPSNFVDFVQDN   83 (96)
T ss_dssp             CEEEEEESSCCCGGGSSCSCTTTBCCCCTTCEEEEES-SCCSSSCCEEEETTCCBCBCCTTSEECCCSC
T ss_pred             CceEEEEeeeecCcccCCCCCCcEeeEcCCCEEEEEE-eeCCCceEEEEeCCCCEEEEehHHeEECCCc
Confidence            357899999998764      4899999999999863 335567888874 799999999999998754

>d1jo8a_ b.34.2.1 (A:) Actin binding protein ABP1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Actin binding protein ABP1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.36  E-value=5e-13  Score=92.39  Aligned_cols=40  Identities=25%  Similarity=0.437  Sum_probs=36.4

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEe--CCceeEeeCCCeeecC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPCD  317 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~--~G~~G~fPsnyV~~i~  317 (336)
                      |+|++||+|.|+++.+++||.|+.  +|++|+||+|||++++
T Consensus        17 Ls~~~Gd~i~v~~~~~~~Ww~~~~~~~g~~G~~P~~yVe~in   58 (58)
T d1jo8a_          17 LTFVENDKIINIEFVDDDWWLGELEKDGSKGLFPSNYVSLGN   58 (58)
T ss_dssp             CCBCTTCEEEEEECCSSSEEEEEETTTCCEEEEEGGGEEECC
T ss_pred             cCCCCCCEEEEEEEcCCCEEEEEECCCCCEEEEchHHEEEcC
Confidence            559999999999999999999876  6899999999999874

>d1opka1 b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Abl tyrosine kinase, SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.35  E-value=7e-13  Score=91.24  Aligned_cols=40  Identities=20%  Similarity=0.529  Sum_probs=35.3

Q ss_pred             CCCCCCCEEEEEeecC-CCeEEEEeCCceeEeeCCCeeecC
Q psy7077         278 PIMGLGTVVPVKQNAE-PGWLAGELRGQTGWFPESYVEPCD  317 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~-~~W~~g~~~G~~G~fPsnyV~~i~  317 (336)
                      |+|++||+|.|+++.+ +|||.++.+|++||||+|||++++
T Consensus        17 Ls~~~Gd~i~vl~~~~~~~W~~~~~~g~~G~~P~~yv~~vd   57 (57)
T d1opka1          17 LSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITPVN   57 (57)
T ss_dssp             CCBCTTCEEEEEEECTTSSEEEEECSSCEEEEEGGGEEESS
T ss_pred             cCCCCCCEEEEeEecCCCCEEEEEECCCEeEEchhheEECC
Confidence            5599999999998755 579999999999999999999874

>d1ng2a2 b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=1.1e-12  Score=103.89  Aligned_cols=57  Identities=19%  Similarity=0.317  Sum_probs=49.3

Q ss_pred             cccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCC
Q psy7077         246 ELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       246 ~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~  319 (336)
                      ..++.|+|.+...++|+                 |++||+|.|+++.++|||.|+.+|++||||+|||+.+...
T Consensus        16 ~~~alydy~a~~~dELs-----------------~~~Gd~i~Vl~~~~~gWw~g~~~g~~G~~P~~yv~~~~~~   72 (118)
T d1ng2a2          16 PYVAIKAYTAVEGDEVS-----------------LLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQKSGQD   72 (118)
T ss_dssp             EEEESSCBCCCSTTBCC-----------------BCTTCEEEEEECCTTSEEEEEETTEEEEEEGGGEEETTSC
T ss_pred             EEEECcCCCCCCCCEec-----------------CCCCCEEEEeEecCCCeEEEEECCeEEEEehhhEEECCCc
Confidence            45677888777766654                 9999999999999999999999999999999999988643

>d1i07a_ b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: EPS8 SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.34  E-value=3e-13  Score=93.84  Aligned_cols=54  Identities=11%  Similarity=0.193  Sum_probs=44.1

Q ss_pred             cccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCC
Q psy7077         248 IAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDE  318 (336)
Q Consensus       248 ~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~  318 (336)
                      .+.|++.+...++                 |+|++||+|.|+++.++||+.++.+|++|+||+|||+++.+
T Consensus         5 ~alydf~a~~~~E-----------------Ls~~~Gd~i~v~~~~~~ww~~~~~~g~~G~~P~nyve~i~~   58 (59)
T d1i07a_           5 KSKYDFVARNSSE-----------------LSVMKDDVLEILDDRRQWWKVRNASGDSGFVPNNILDIMRT   58 (59)
T ss_dssp             EESSCBCCSSTTB-----------------CCBCTTCEEEECGGGCCEEEEECTTSCEEEEEGGGEEEECC
T ss_pred             EEccCCCCCCCCe-----------------eeEcCCCEEEEEEEcCCcEEEEEcCCCEEEECHHHeEECCC
Confidence            4566676666555                 45999999999999887777667899999999999999865

>d1ue9a_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=2.5e-12  Score=94.73  Aligned_cols=59  Identities=27%  Similarity=0.449  Sum_probs=47.2

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeC-----CceeEeeCCCeeecCCCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELR-----GQTGWFPESYVEPCDETGE  321 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~-----G~~G~fPsnyV~~i~~~~~  321 (336)
                      +.+.++|.+...++                 |+|++||+|.|+++.+++||.|+++     |++||||+|||+++.+...
T Consensus        10 ~~al~~y~~~~~~e-----------------Ls~~~Gd~i~Vl~~~~~~Ww~g~~~~~~~~~~~G~~P~~yv~~~~~~~~   72 (80)
T d1ue9a_          10 AQVTSAYVASGSEQ-----------------LSLAPGQLILILKKNTSGWWQGELQARGKKRQKGWFPASHVKLLGPSSE   72 (80)
T ss_dssp             EEECSCCCCCSTTB-----------------CCCCTTCEEEEEEECSSSEEEEEECSCCSSCCEEEEETTSEEECCSCCS
T ss_pred             EEECcCCCCCCCCE-----------------eeEcCCCEEEEEEEeCCCeEEEEEccCCCCCCEeEEEheeEEECCCCCC
Confidence            45566676666555                 4499999999999999999999875     4599999999999976544


Q ss_pred             C
Q psy7077         322 V  322 (336)
Q Consensus       322 ~  322 (336)
                      .
T Consensus        73 ~   73 (80)
T d1ue9a_          73 R   73 (80)
T ss_dssp             S
T ss_pred             C
Confidence            3

>d1uffa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=2e-12  Score=97.96  Aligned_cols=55  Identities=33%  Similarity=0.686  Sum_probs=45.3

Q ss_pred             cccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeec--CCCeEEEEeCCceeEeeCCCeeecCCC
Q psy7077         248 IAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNA--EPGWLAGELRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       248 ~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~--~~~W~~g~~~G~~G~fPsnyV~~i~~~  319 (336)
                      .|.|+|...+.++                 |+|++||+|.|+++.  ++|||.++.+|++||||+|||+++.+.
T Consensus         9 rAlydy~~~~~~E-----------------Ls~~~Gd~v~Vl~~~~~~~~w~~~~~~g~~G~~P~~Yve~~~~~   65 (93)
T d1uffa_           9 RALYPFEARNHDE-----------------MSFNSGDIIQVDEKTVGEPGWLYGSFQGNFGWFPCNYVEKMPSS   65 (93)
T ss_dssp             EESSCBCCCSSSC-----------------CCBCTTCEEEECSSCCCSSSEEEEEETTEEEEEETTTEEECCSS
T ss_pred             EECccCCCCCCCC-----------------ccCcCCCEEEEEEeccCCCCEEEEEeCCcEEEEchHHEEECCCC
Confidence            4556666666555                 449999999999876  578999999999999999999998654

>d2iima1 b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p56-lck tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=1.1e-12  Score=91.81  Aligned_cols=54  Identities=19%  Similarity=0.414  Sum_probs=45.8

Q ss_pred             ceeeeeeeecccCCCCCCCCCCCCEEEEeeeecCCCCeEEEEe--eCceeeecccceee
Q psy7077         169 YRRYRAIYEFVSRNGDELSFQPGDIIMVPVKQNAEPGWLAGEL--RGQTGWFPESYVEP  225 (336)
Q Consensus       169 ~~~~~al~df~a~~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~--~g~~G~fP~~yve~  225 (336)
                      ...++|+|||.++.++||+|++||+|.|+.  . .++||.++.  +|+.||||++||++
T Consensus         6 ~~~~~al~dy~a~~~~eLs~~~Gd~i~v~~--~-~~~ww~~~~~~~g~~G~~P~~yV~~   61 (62)
T d2iima1           6 DNLVIALHSYEPSHDGDLGFEKGEQLRILE--Q-SGEWWKAQSLTTGQEGFIPFNFVAK   61 (62)
T ss_dssp             TCEEEESSCBCCCSTTBCCBCTTCEEEEEE--C-CSSEEEEEETTTCCEEEEEGGGEEE
T ss_pred             CcEEEECCCCCcCCcCCcCCCCCCEEEEeE--E-cCCCEEEEeccCCeEeEEcHHHEEe
Confidence            356899999999999999999999999963  3 346777764  68999999999985

>d1spka_ b.34.2.1 (A:) BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.31  E-value=1.4e-12  Score=94.10  Aligned_cols=42  Identities=31%  Similarity=0.616  Sum_probs=35.9

Q ss_pred             CCCCCCCEEEEEee-cCCCeEEEEeC--CceeEeeCCCeeecCCC
Q psy7077         278 PIMGLGTVVPVKQN-AEPGWLAGELR--GQTGWFPESYVEPCDET  319 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~-~~~~W~~g~~~--G~~G~fPsnyV~~i~~~  319 (336)
                      |+|++||+|.|+.+ +++|||.|+.+  |++||||+|||++++..
T Consensus        25 Lsf~~Gd~i~vl~~~~~~gW~~g~~~~~g~~G~fP~nyVe~i~~p   69 (72)
T d1spka_          25 LSFAQGDVLTLLIPEEKDGWLYGEHDTTKARGWFPSSYTKLLSGP   69 (72)
T ss_dssp             CCBCTTCEEEECCSSCBTTEEEEEETTTCCEEEEEGGGCEECSSC
T ss_pred             eeEcCCCEEEEEEeecCCCeEEEEECCCCCEEEEchhhEEECCCC
Confidence            55999999999855 66789999864  89999999999999753

>d1gl5a_ b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: tyrosine kinase tec
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.31  E-value=2e-12  Score=91.90  Aligned_cols=56  Identities=14%  Similarity=0.280  Sum_probs=45.7

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEE-eCCceeEeeCCCeeecCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGE-LRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~-~~G~~G~fPsnyV~~i~~~  319 (336)
                      .+|.+++.+...++                 |+|++||+|.|+++.+++||.++ .+|++||||+|||+.+.++
T Consensus         5 v~Alydf~a~~~~e-----------------Ls~~~Gd~i~v~~~~~~~Ww~~~~~~g~~G~~P~~yV~~~~~~   61 (67)
T d1gl5a_           5 VVAMYDFQATEAHD-----------------LRLERGQEYIILEKNDLHWWRARDKYGSEGYIPSNYVTGKKSN   61 (67)
T ss_dssp             EEECSCBCCSSSSB-----------------CCBCTTCEEEEEECSSSSEEEEECSSSCEEEEETTSEESSTTT
T ss_pred             EEECCCCCCCCcCC-----------------cCCCCCCEEEEEEecCCCcEEEEECCCCEEEEEhHHeEEecCC
Confidence            35667777666555                 45999999999999998888885 5789999999999987654

>d1uhfa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=1.2e-12  Score=93.51  Aligned_cols=55  Identities=29%  Similarity=0.534  Sum_probs=44.5

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeCCceeEeeCCCeeecCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~G~~G~fPsnyV~~i~~~  319 (336)
                      .+|.++|.+...++                 |+|++||+|.|+++++ +||.++.+|++||||+|||++++..
T Consensus        11 ~vAl~~y~~~~~~e-----------------Ls~~~Gd~v~vl~~~~-~Ww~~~~~g~~G~vP~~yv~~~~~~   65 (69)
T d1uhfa_          11 YIALYPYSSVEPGD-----------------LTFTEGEEILVTQKDG-EWWTGSIGDRSGIFPSNYVKPKDSG   65 (69)
T ss_dssp             EECSSCBCCSSSSB-----------------CCBCTTCEEEECEEET-TEEEECSTTCCEEECGGGCEECCCC
T ss_pred             EEECccCCCCCcCC-----------------cCCCCCCEEEEEEecC-CEEEEEECCcEEEEchhhEEECCCC
Confidence            45667776666555                 4599999999998864 5777999999999999999999754

>d2rn8a1 b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus musculus [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Mus musculus [TaxId: 10090]

Probab=99.29  E-value=1.3e-12  Score=88.44  Aligned_cols=51  Identities=20%  Similarity=0.260  Sum_probs=41.4

Q ss_pred             cccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEE-eCCceeEeeCCCeee
Q psy7077         248 IAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGE-LRGQTGWFPESYVEP  315 (336)
Q Consensus       248 ~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~-~~G~~G~fPsnyV~~  315 (336)
                      +|.|++.+...++                 |+|++||+|.|+++.+++||.++ .+|+.|+||+|||+.
T Consensus         2 ~Alydy~a~~~~e-----------------Ls~~~Gd~~~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~e   53 (53)
T d2rn8a1           2 IALYDYQTNDPQE-----------------LALRCDEEYYLLDSSEIHWWRVQDKNGHEGYAPSSYLVE   53 (53)
T ss_dssp             EESSCCCCSSTTB-----------------CCCCTTCEEEECCCSCSSCEEEECTTSCEEEECGGGEEE
T ss_pred             EEeeeECCCCCCe-----------------eeECCCCEEEEeEEcCCCeEEEEeCCCCEEEEeHHHEeC
Confidence            4556666665555                 55999999999999888888887 679999999999974

>d1arka_ b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3 domain from nebulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=2e-12  Score=89.89  Aligned_cols=39  Identities=31%  Similarity=0.601  Sum_probs=35.7

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEe--CCceeEeeCCCeeec
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPC  316 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~--~G~~G~fPsnyV~~i  316 (336)
                      |+|++||+|.|+++.+++||.++.  +|++|+||+|||++|
T Consensus        20 Ls~~~Gd~i~v~~~~~~~W~~~~~~~~g~~G~vP~nyve~i   60 (60)
T d1arka_          20 VSFKDGDAIINVQAIDEGWMYGTVQRTGRTGMLPANYVEAI   60 (60)
T ss_dssp             CCCCTTCEECCSEECSSSEEEEECTTTCCEEEEETTTCEEC
T ss_pred             cCCCCCCEEEEEEEcCCCEEEEEECCCCCEEEEcHHHEEEC
Confidence            559999999999999999999886  699999999999975

>d1uhca_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein Baa76854.1 (KIAA1010)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=6.6e-12  Score=92.12  Aligned_cols=56  Identities=13%  Similarity=0.316  Sum_probs=45.5

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeec----CCCeEEEEeCCceeEeeCCCeeecCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNA----EPGWLAGELRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~----~~~W~~g~~~G~~G~fPsnyV~~i~~~  319 (336)
                      ..|.++|.+...++                 |+|++||+|.|+++.    +++||.++.+|++||||+|||+++++.
T Consensus        16 ~~Alydy~a~~~~E-----------------Ls~~~Gd~i~vl~~~~~~~~~~W~~g~~~g~~G~vP~~yv~~~~~~   75 (79)
T d1uhca_          16 YFAVYTFKARNPNE-----------------LSVSANQKLKILEFKDVTGNTEWWLAEVNGKKGYVPSNYIRKTESG   75 (79)
T ss_dssp             EEESSCBCCCSSSB-----------------CCBCTTCEEEEEESCCTTSCTTEEEEESSSCEEEEEGGGEEECCSS
T ss_pred             EEECccCCCCCCCC-----------------ccCCCCCEEEEEEeecCCCCCCEEEEEECCCEEEEehhhEEECCCC
Confidence            34566666665555                 459999999999875    468999999999999999999999754

>d1k9aa1 b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=6e-12  Score=90.44  Aligned_cols=57  Identities=21%  Similarity=0.384  Sum_probs=46.0

Q ss_pred             cccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeec-CCCeEEEEeC-CceeEeeCCCeeecCCC
Q psy7077         246 ELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNA-EPGWLAGELR-GQTGWFPESYVEPCDET  319 (336)
Q Consensus       246 ~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~-~~~W~~g~~~-G~~G~fPsnyV~~i~~~  319 (336)
                      ..+|.|++.+.+.++|                 +|++||+|.|+++. ++|||.++.+ |+.|+||+|||+.++..
T Consensus         8 ~~~Alydy~a~~~~EL-----------------s~~~Gd~i~vl~~~~~~~W~~~~~~~g~~G~~P~~yve~~~~~   66 (71)
T d1k9aa1           8 ECIAKYNFHGTAEQDL-----------------PFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKREGV   66 (71)
T ss_dssp             EEEESSCBCCSSSSBC-----------------CBCTTCEEEEEEECSSTTEEEEECTTCCEEEEEGGGEEECCCC
T ss_pred             EEEEccCCCCCCCCCc-----------------cCCCCCEEEEeEeccCCCEEEEEeCCCCEEEEchHHeEEcccC
Confidence            3567777777766664                 49999999999875 6689999875 89999999999998643

>d1i1ja_ b.34.2.1 (A:) Melanoma inhibitory activity protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Melanoma inhibitory activity protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=2.6e-12  Score=99.51  Aligned_cols=59  Identities=20%  Similarity=0.371  Sum_probs=50.4

Q ss_pred             eeeeeeeecccCCCCCCCCCCCCEEEEeeee-cCCCCeEEEEeeC--------ceeeecccceeecCC
Q psy7077         170 RRYRAIYEFVSRNGDELSFQPGDIIMVPVKQ-NAEPGWLAGELRG--------QTGWFPESYVEPCDE  228 (336)
Q Consensus       170 ~~~~al~df~a~~~~eLs~~~Gdii~v~~~~-~~~~gW~~g~~~g--------~~G~fP~~yve~~~~  228 (336)
                      ..++|+|+|.+++++||+|++||+|.|+++. ..+.+||.|+..|        +.||||+|||+.+..
T Consensus        22 ~~~~Alydy~~~~~~eL~f~~Gd~i~Vl~k~~~~~~~WW~g~~~g~~~~~~~g~~G~fP~nyV~~~~~   89 (106)
T d1i1ja_          22 SMAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVREDQT   89 (106)
T ss_dssp             EEEEESSCBCCSSTTBCCBCTTCEEEEEEEECGGGTTEEEEEEBCSSTTCBCSCCEEEEGGGEEEEEE
T ss_pred             eEEEEccccCCCCCCCccCCCCCEEEEEEecCCCCcceEEEEecCccccccCCcccccccccEEEccc
Confidence            4689999999999999999999999997543 2457899998654        589999999998763

>d1wiea_ b.34.2.1 (A:) RIM binding protein 2, RIMBP2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: RIM binding protein 2, RIMBP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=5.6e-12  Score=95.83  Aligned_cols=46  Identities=26%  Similarity=0.450  Sum_probs=38.2

Q ss_pred             CCCCCCCCEEEEEee-cCCCeEEEE-eCCceeEeeCCCeeecCCCCCC
Q psy7077         277 SPIMGLGTVVPVKQN-AEPGWLAGE-LRGQTGWFPESYVEPCDETGEV  322 (336)
Q Consensus       277 ~Lsf~~Gd~V~V~~~-~~~~W~~g~-~~G~~G~fPsnyV~~i~~~~~~  322 (336)
                      +|+|++||+|.|+.+ +++|||.++ .+|++||||+|||+.+.+....
T Consensus        39 ELsf~~Gd~i~v~~~~~~~gW~~~~~~~G~~G~~P~nyve~~~~~~~~   86 (96)
T d1wiea_          39 ELPLTAGKYLYVYGDMDEDGFYEGELLDGQRGLVPSNFVDFVQDNESR   86 (96)
T ss_dssp             BCCCCTTCEEEEESSCCSSSCCEEEETTCCBCBCCTTSEECCCSCCCC
T ss_pred             EeeEcCCCEEEEEEeeCCCceEEEEeCCCCEEEEehHHeEECCCcccc
Confidence            477999999999976 457899886 5899999999999999765433

>d1awwa_ b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=1.3e-12  Score=92.90  Aligned_cols=56  Identities=16%  Similarity=0.324  Sum_probs=46.5

Q ss_pred             cccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEE-eCCceeEeeCCCeeecCC
Q psy7077         246 ELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGE-LRGQTGWFPESYVEPCDE  318 (336)
Q Consensus       246 ~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~-~~G~~G~fPsnyV~~i~~  318 (336)
                      ..+|.++|.+...++|                 +|++||+|.|+++.+++||.++ .+|+.||||+|||+++++
T Consensus        10 ~v~Alydy~a~~~~eL-----------------s~~~Gd~i~v~~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   66 (67)
T d1awwa_          10 KVVALYDYMPMNANDL-----------------QLRKGDEYFILEESNLPWWRARDKNGQEGYIPSNYVTEAED   66 (67)
T ss_dssp             EEEBSSCCCCSSSSSC-----------------CCCSSCEEECCCCCSSSEECCBCTTSCBCCEETTTBCCSCC
T ss_pred             EEEECcCCCCCCcCCc-----------------CCCCCCEEEEEEEcCCCeEEEEECCCCEEEEcHHHeEECcC
Confidence            3466777777766664                 4999999999999888888886 589999999999998875

>d1ycsb2 b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=3.2e-12  Score=89.66  Aligned_cols=52  Identities=13%  Similarity=0.217  Sum_probs=42.5

Q ss_pred             cccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecC---CCeEEEEeCCceeEeeCCCeeec
Q psy7077         248 IAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAE---PGWLAGELRGQTGWFPESYVEPC  316 (336)
Q Consensus       248 ~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~---~~W~~g~~~G~~G~fPsnyV~~i  316 (336)
                      .|.+++.+.+.++                 |+|++||+|.|+++.+   +|||.|+.+|++|+||+|||+++
T Consensus         8 ~Alydy~a~~~~E-----------------Ls~~~Gd~i~vl~~~~~~~~gW~~g~~~g~~G~~P~~yv~~~   62 (63)
T d1ycsb2           8 YALWDYEPQNDDE-----------------LPMKEGDCMTIIHREDEDEIEWWWARLNDKEGYVPRNLLGLY   62 (63)
T ss_dssp             EESSCBCCSSTTB-----------------CCBCSSCEEEECCCCTTSCSSEEEEEETTEEEEEEGGGEECC
T ss_pred             EEeeCCCCCCCCC-----------------cCCCCCCEEEEEEecCCCCCCEEEEEECCeEEEEchHHhEeC
Confidence            4566676666555                 4599999999998754   37999999999999999999875

>d2hspa_ b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phospholipase C, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=1.4e-12  Score=93.82  Aligned_cols=58  Identities=19%  Similarity=0.342  Sum_probs=45.9

Q ss_pred             cccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEeC-CceeEeeCCCeeecCCCC
Q psy7077         246 ELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGELR-GQTGWFPESYVEPCDETG  320 (336)
Q Consensus       246 ~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~~-G~~G~fPsnyV~~i~~~~  320 (336)
                      .+.|.+++.+.+.++                 |+|++||+|.|+++.+++||.|+++ ++.||||+|||+++.+..
T Consensus         8 ~v~Aly~f~a~~~~e-----------------Lsf~~Gd~i~v~~~~~~~Ww~g~~~~~~~G~fP~~yv~~~~~~~   66 (71)
T d2hspa_           8 AVKALFDYKAQREDE-----------------LTFIKSAIIQNVEKQEGGWWRGDYGGKKQLWFPSNYVEEMVNPE   66 (71)
T ss_dssp             CEECCSCCCCSSSSS-----------------CCCCTTCEEBSCCCBTTTEECCBCSSCCSCCEETTTCCSCSCCC
T ss_pred             EEEEcccCCcCCcCC-----------------ccCCCCCEEEEEEecCCCEEEEEECCeEEEEEchHHeEEcCCcc
Confidence            345667777766655                 4499999999999999999999875 455599999999987543

>d1ug1a_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein Baa76854.1 (KIAA1010)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=9.2e-12  Score=93.99  Aligned_cols=57  Identities=16%  Similarity=0.118  Sum_probs=45.9

Q ss_pred             cccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecC----CCeEEEEeCCceeEeeCCCeeecCCCCC
Q psy7077         248 IAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAE----PGWLAGELRGQTGWFPESYVEPCDETGE  321 (336)
Q Consensus       248 ~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~----~~W~~g~~~G~~G~fPsnyV~~i~~~~~  321 (336)
                      .+.++|.+...++                 |+|++||+|.|+++.|    ++||.++.+|++||||+|||+++.+...
T Consensus        21 ~a~~~f~a~~~~e-----------------Ls~~~Gd~v~vl~~~d~~~~~~Ww~~~~~g~~G~~P~~yv~~~~~~~~   81 (92)
T d1ug1a_          21 QAERNFNAAQDLD-----------------VSLLEGDLVGVIKKKDPMGSQNRWLIDNGVTKGFVYSSFLKPYNPRRS   81 (92)
T ss_dssp             EESSCCCCCSSSC-----------------CCCCTTCEEEEEESCCTTSCSSEEEEECSSSEEEEEGGGEEECCCCSS
T ss_pred             EEcCCcCCCCCCe-----------------EEEecccEEEEEEcccccccCCceEEEecccEEEEEhhhceecCCccc
Confidence            4556666666555                 4599999999999864    6899999999999999999999865433

>d1qcfa1 b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hemapoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=4.2e-12  Score=89.71  Aligned_cols=55  Identities=20%  Similarity=0.306  Sum_probs=43.9

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEe-CCceeEeeCCCeeecCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGEL-RGQTGWFPESYVEPCDE  318 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~-~G~~G~fPsnyV~~i~~  318 (336)
                      .+|.++|.+...++                 |+|++||+|.|+++.++|||.+.. +|+.|+||+|||+++++
T Consensus         7 vvAlydy~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~ww~~~~~~~g~~G~vP~~yv~~~~~   62 (65)
T d1qcfa1           7 VVALYDYEAIHHED-----------------LSFQKGDQMVVLEESGEWWKARSLATRKEGYIPSNYVARVDS   62 (65)
T ss_dssp             EEESSCBCCCSTTB-----------------CCBCTTCEEEEEECCTTEEEEEETTTCCEEEEEGGGEEETTC
T ss_pred             EEECCcCCCCCcCc-----------------cCCCCCCEEEEEEECCCCEEEEEccCCCEEEEchHHeEECcc
Confidence            35667777666555                 459999999999988877776554 79999999999999864

>d1efna_ b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Fyn proto-oncogene tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=5.6e-12  Score=86.66  Aligned_cols=39  Identities=26%  Similarity=0.570  Sum_probs=34.5

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEe--CCceeEeeCCCeeec
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPC  316 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~--~G~~G~fPsnyV~~i  316 (336)
                      |+|++||+|.|+++.+++||.++.  +|++|+||+|||+++
T Consensus        17 Ls~~~Gd~i~v~~~~~~~Ww~~~~~~~g~~G~vP~~yv~pv   57 (57)
T d1efna_          17 LSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYVAPV   57 (57)
T ss_dssp             CCBCTTCEEEEEECSSCSEEEEEETTTTEEEEEEGGGEEEC
T ss_pred             cCCCCCCEEEEEEecCCCCEEEEECCCCCEEEEeHHHeEEC
Confidence            559999999999999888887764  799999999999875

>d2v1ra1 b.34.2.1 (A:10-76) Peroxisomal membrane protein Pex13p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Peroxisomal membrane protein Pex13p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.24  E-value=3.5e-12  Score=90.60  Aligned_cols=39  Identities=18%  Similarity=0.482  Sum_probs=33.7

Q ss_pred             CCCCCCCEEEEEeecC-----CCeEEEEe-CCceeEeeCCCeeec
Q psy7077         278 PIMGLGTVVPVKQNAE-----PGWLAGEL-RGQTGWFPESYVEPC  316 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~-----~~W~~g~~-~G~~G~fPsnyV~~i  316 (336)
                      |+|++||+|.|+++.+     ++||.|+. +|++|+||+|||++|
T Consensus        23 Ls~~~Gd~i~vl~~~d~~~~~~~Ww~g~~~~G~~G~~P~nyve~i   67 (67)
T d2v1ra1          23 VALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEII   67 (67)
T ss_dssp             CCBCTTCEEEEEEEECTTSCEEEEEEEECTTSCEEEEEGGGEEEC
T ss_pred             eCCCCCCEEEEEEeecCCCcCCCeEEEEeCCCCEEEEEHHHEEEC
Confidence            5599999999998864     57888875 899999999999975

>d1u5sa1 b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Nck-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=9.4e-12  Score=89.40  Aligned_cols=56  Identities=23%  Similarity=0.368  Sum_probs=43.2

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecC--CCeEEEE-eCCceeEeeCCCeeecCCC
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAE--PGWLAGE-LRGQTGWFPESYVEPCDET  319 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~--~~W~~g~-~~G~~G~fPsnyV~~i~~~  319 (336)
                      +.|.|++.+...++                 |+|++||+|.|+++.+  ++||.++ .+|++|+||+|||+++.+.
T Consensus         9 ~~Alydf~~~~~~e-----------------Ls~~~Gd~i~vl~~~~~~~~Ww~~~~~~G~~G~vP~~yv~~~~~~   67 (71)
T d1u5sa1           9 VQTLYPFSSVTEEE-----------------LNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVVLSDG   67 (71)
T ss_dssp             EEESSCCCCCSSSB-----------------CCCCSSCCEEEEECCCTTTCEEEEEETTTEEEEEETTSEEECCCS
T ss_pred             EEECccCCCCCCCE-----------------eeECCCCEEEEEEcccCCCCeEEEEECCCCEEEEChHHEEECCCC
Confidence            34556666655555                 5599999999998754  3677775 6899999999999999764

>d1gcqc_ b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Vav N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.23  E-value=5.4e-12  Score=89.99  Aligned_cols=40  Identities=30%  Similarity=0.635  Sum_probs=35.0

Q ss_pred             CCCCCCCCEEEEEee-cCCCeEEEEe--CCceeEeeCCCeeec
Q psy7077         277 SPIMGLGTVVPVKQN-AEPGWLAGEL--RGQTGWFPESYVEPC  316 (336)
Q Consensus       277 ~Lsf~~Gd~V~V~~~-~~~~W~~g~~--~G~~G~fPsnyV~~i  316 (336)
                      +|+|++||+|.|+++ .++|||.|++  +|++||||+|||++.
T Consensus        26 eLsf~~GD~i~Vl~~~~~~gWw~G~~~~~g~~G~fP~nyVePy   68 (69)
T d1gcqc_          26 FLRLNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPCNRVHPY   68 (69)
T ss_dssp             BCCBCTTCEEEEEECCTTCSEEEEEETTTTEEEEEEGGGEEEC
T ss_pred             EeeEcCCCEEEEEEEecCCCEEEEEECCCCCEEEEeHHHEEEc
Confidence            377999999999976 5679999986  799999999999974

>d1ckaa_ b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: C-Crk, N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.23  E-value=5.3e-12  Score=86.73  Aligned_cols=38  Identities=26%  Similarity=0.549  Sum_probs=34.5

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEe-CCceeEeeCCCeee
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGEL-RGQTGWFPESYVEP  315 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~-~G~~G~fPsnyV~~  315 (336)
                      |+|++||+|.|+++.+++||.++. +|++|+||+|||++
T Consensus        18 Ls~~~Gd~i~v~~~~~~~Ww~~~~~~g~~G~vP~~yve~   56 (57)
T d1ckaa_          18 LPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEK   56 (57)
T ss_dssp             CCBCTTCEEEEEECSSSSEEEEECTTSCEEEEEGGGEEC
T ss_pred             cCCCCCCEEEEEEEcCCCeEEEEECCCCEEEEcHHHeEE
Confidence            559999999999999999999974 68999999999985

>d1kjwa1 b.34.2.1 (A:430-525) Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Psd-95
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.21  E-value=9.6e-13  Score=100.39  Aligned_cols=55  Identities=20%  Similarity=0.438  Sum_probs=46.5

Q ss_pred             eeeeeeecccCC-----CCCCCCCCCCEEEEeeeecCCCCeEEEEe------eCceeeecccceeecC
Q psy7077         171 RYRAIYEFVSRN-----GDELSFQPGDIIMVPVKQNAEPGWLAGEL------RGQTGWFPESYVEPCD  227 (336)
Q Consensus       171 ~~~al~df~a~~-----~~eLs~~~Gdii~v~~~~~~~~gW~~g~~------~g~~G~fP~~yve~~~  227 (336)
                      .++|+|||.++.     ..||+|++||+|.|+  .+.+++||.|+.      +|++||||+|||++..
T Consensus         3 ~vrAlydy~~~~d~~~~~~eLsf~kGdil~V~--~~~d~~WW~~~~~~~~~~~g~~G~~Psnyv~e~~   68 (96)
T d1kjwa1           3 YIRALFDYDKTKDCGFLSQALSFRFGDVLHVI--DAGDEEWWQARRVHSDSETDDIGFIPSKRRVERR   68 (96)
T ss_dssp             EEEESSCBCHHHHHCCCSSBCCBCTTCEEEEE--ECCSSSEEEEEECCSSCCCSCCEEEECHHHHHHH
T ss_pred             EEEEcccCcCCcCCCCCCccceEcCCCEEEEe--eeccCceEEEEEccCCCCCCCEeEEeccceeeeh
Confidence            578999999875     458999999999995  457889999974      5789999999997643

>d1fmka1 b.34.2.1 (A:82-145) c-src protein tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: c-src protein tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=7.3e-12  Score=88.13  Aligned_cols=54  Identities=26%  Similarity=0.447  Sum_probs=44.1

Q ss_pred             cccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEEe--CCceeEeeCCCeeecCC
Q psy7077         248 IAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGEL--RGQTGWFPESYVEPCDE  318 (336)
Q Consensus       248 ~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~~--~G~~G~fPsnyV~~i~~  318 (336)
                      +|.+++.+...++                 |+|++||+|.|+++.+++||.++.  +|++|+||+|||+++++
T Consensus         6 vAlydf~~~~~~e-----------------Ls~~~Gd~i~v~~~~~~~Ww~~~~~~~g~~G~vP~~yv~~~~s   61 (64)
T d1fmka1           6 VALYDYESRTETD-----------------LSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSDS   61 (64)
T ss_dssp             EESSCBCCCSSSB-----------------CCBCTTCEEEESCCCSSSEEEEEETTTCCEEEEEGGGEEETTS
T ss_pred             EECccCCCcCcCC-----------------cCCCCCCEEEEEEEcCCCcEEEEECCCCCEEEEehHHeEECcc
Confidence            5666776666555                 459999999999999888888865  58999999999998863

>d1wfwa_ b.34.2.1 (A:) Kalirin-9a {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Kalirin-9a
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.20  E-value=1.8e-11  Score=88.57  Aligned_cols=42  Identities=21%  Similarity=0.287  Sum_probs=36.6

Q ss_pred             CCCCCCCEEEEEeecCCCeEEEEe------CCceeEeeCCCeeecCCC
Q psy7077         278 PIMGLGTVVPVKQNAEPGWLAGEL------RGQTGWFPESYVEPCDET  319 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~~~~W~~g~~------~G~~G~fPsnyV~~i~~~  319 (336)
                      |+|++||+|.|+++.+++||.++.      +|++||||+|||+++...
T Consensus        24 Ls~~~Gd~i~vl~~~~~~Ww~v~~~~~~~~~g~~G~vP~~yve~~~~p   71 (74)
T d1wfwa_          24 ICVSQGEVVQVLAVNQQNMCLVYQPASDHSPAAEGWVPGSILAPFSGP   71 (74)
T ss_dssp             CCBCTTCEEEEEEECTTSEEEEEECSCSSSSSEEEEEEGGGCCBCCST
T ss_pred             ccCccCCEEEEEEEcCCCCEEEEeCccCCcCCeeeEEchHHeEECCCC
Confidence            559999999999999888888864      479999999999998754

>d2iima1 b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p56-lck tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=7e-12  Score=87.67  Aligned_cols=52  Identities=23%  Similarity=0.330  Sum_probs=41.8

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeecCCCeEEEE-eCCceeEeeCCCeee
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNAEPGWLAGE-LRGQTGWFPESYVEP  315 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~~~~W~~g~-~~G~~G~fPsnyV~~  315 (336)
                      .++.+++.+...++                 |+|++||+|.|+++.++|||... .+|++||||+|||++
T Consensus         9 ~~al~dy~a~~~~e-----------------Ls~~~Gd~i~v~~~~~~ww~~~~~~~g~~G~~P~~yV~~   61 (62)
T d2iima1           9 VIALHSYEPSHDGD-----------------LGFEKGEQLRILEQSGEWWKAQSLTTGQEGFIPFNFVAK   61 (62)
T ss_dssp             EEESSCBCCCSTTB-----------------CCBCTTCEEEEEECCSSEEEEEETTTCCEEEEEGGGEEE
T ss_pred             EEECCCCCcCCcCC-----------------cCCCCCCEEEEeEEcCCCEEEEeccCCeEeEEcHHHEEe
Confidence            45667777666555                 44999999999999988887544 579999999999985

>d1t0ha_ b.34.2.1 (A:) SH3-like domain of the L-type calcium channel {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.18  E-value=6.3e-12  Score=95.07  Aligned_cols=53  Identities=21%  Similarity=0.430  Sum_probs=46.7

Q ss_pred             ceeeeeeeecccCCCCC-------CCCCCCCEEEEeeeecCCCCeEEEEe---eCceeeecccce
Q psy7077         169 YRRYRAIYEFVSRNGDE-------LSFQPGDIIMVPVKQNAEPGWLAGEL---RGQTGWFPESYV  223 (336)
Q Consensus       169 ~~~~~al~df~a~~~~e-------Ls~~~Gdii~v~~~~~~~~gW~~g~~---~g~~G~fP~~yv  223 (336)
                      ...++|+|||++..+++       |+|++||+|.|+  ...+++||.|++   +|+.||||++++
T Consensus        21 ~~~vrAlydY~~~~dd~~P~~~~~LsF~~GDii~v~--~~~d~~WW~gr~~~~~g~~G~~PS~~~   83 (96)
T d1t0ha_          21 AFAVRTNVRYSAAQEDDVPVPGMAISFEAKDFLHVK--EKFNNDWWIGRLVKEGCEIGFIPSPVK   83 (96)
T ss_dssp             CEEEEESSCBCCCGGGCCSSTTCBCCBCTTCEEEEE--EECSSSEEEEEESSTTCCCEEEECHHH
T ss_pred             cEEEEEeeccCCCCCCCCccccccccCCCCCEEEEe--eeeCCCceEEEEcCCCCCEEEecCcHH
Confidence            45789999999998888       999999999995  457889999997   578999999874

>d1zuua1 b.34.2.1 (A:2-57) BZZ1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BZZ1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.14  E-value=2.5e-11  Score=83.03  Aligned_cols=38  Identities=21%  Similarity=0.460  Sum_probs=31.5

Q ss_pred             CCCCCCCEEEEEeec-CCCeEEEE--eCCceeEeeCCCeee
Q psy7077         278 PIMGLGTVVPVKQNA-EPGWLAGE--LRGQTGWFPESYVEP  315 (336)
Q Consensus       278 Lsf~~Gd~V~V~~~~-~~~W~~g~--~~G~~G~fPsnyV~~  315 (336)
                      |+|++||+|.|+++. ++|||.++  .+|++|+||+|||++
T Consensus        16 Ls~~~Gd~i~v~~~~~~~~w~~~~~~~~g~~G~~P~nyvev   56 (56)
T d1zuua1          16 ITITPGDKISLVARDTGSGWTKINNDTTGETGLVPTTYIRI   56 (56)
T ss_dssp             CCBCTTCCEEEEECCSSSSEEEEEETTTTEEEEEEGGGEEC
T ss_pred             eeECCCCEEEEEEEecCCCcEEEeCCCCceEEEEehhhEEC
Confidence            559999999999875 46777654  479999999999984

>d1phta_ b.34.2.1 (A:) Phosphatidylinositol 3-kinase (p85-alpha subunit, pi3k), SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phosphatidylinositol 3-kinase (p85-alpha subunit, pi3k), SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=6.5e-12  Score=92.81  Aligned_cols=55  Identities=29%  Similarity=0.430  Sum_probs=43.2

Q ss_pred             cccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeec---------------CCCeEEEEe--CCceeEeeC
Q psy7077         248 IAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNA---------------EPGWLAGEL--RGQTGWFPE  310 (336)
Q Consensus       248 ~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~---------------~~~W~~g~~--~G~~G~fPs  310 (336)
                      .|.|++.+...++                 |+|++||+|.|+++.               ++|||.|+.  +|++||||+
T Consensus         7 raly~y~~~~~~e-----------------Ls~~~Gd~i~V~~~~~~~~~~~~~~~~~~~~~GW~~G~~~~~g~~G~FP~   69 (83)
T d1phta_           7 RALYDYKKEREED-----------------IDLHLGDILTVNKGSLVALGFSDGQEARPEEIGWLNGYNETTGERGDFPG   69 (83)
T ss_dssp             EECSCBCCSSTTB-----------------CCBCTTCEEEEEHHHHHTTTCCTTGGGCHHHHCEEEEEETTTTEEEEEEG
T ss_pred             EEcCccCCCCCCc-----------------ccccCCCEEEEEeccccccccccccccccCCCCeEEEEECCCCcEeeEeh
Confidence            4556666665555                 459999999999652               578999975  899999999


Q ss_pred             CCeeecCCC
Q psy7077         311 SYVEPCDET  319 (336)
Q Consensus       311 nyV~~i~~~  319 (336)
                      |||+++...
T Consensus        70 nYVe~i~~~   78 (83)
T d1phta_          70 TYVEYIGRK   78 (83)
T ss_dssp             GGEEEEEEE
T ss_pred             hhEEEcCCc
Confidence            999998643

>d1bb9a_ b.34.2.1 (A:) Amphiphysin 2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Amphiphysin 2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.13  E-value=2.6e-11  Score=89.76  Aligned_cols=55  Identities=27%  Similarity=0.421  Sum_probs=43.4

Q ss_pred             cccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEeec-----CCCeEEEEe----------CCceeEeeC
Q psy7077         246 ELIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQNA-----EPGWLAGEL----------RGQTGWFPE  310 (336)
Q Consensus       246 ~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~~-----~~~W~~g~~----------~G~~G~fPs  310 (336)
                      .+.|.|+|.+...++|                 +|++||+|.|+.+.     ++|||.|+.          +|++||||+
T Consensus        14 ~~~Alydy~a~~~~EL-----------------s~~~Gd~i~Vl~~~~~~~~~dgWw~G~~~~~~~~~~~~~g~~G~fP~   76 (83)
T d1bb9a_          14 KVQAQHDYTATDTDEL-----------------QLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVFPE   76 (83)
T ss_dssp             EEEESSCBCCSSTTBC-----------------CBCTTCEEEEECCSCGGGCCTTEEEEEEHHHHHTTCCHHHHCEEEEG
T ss_pred             EEEEceeECCCCCCEe-----------------cCcCCCEEEEEEccCCCcccCCEeEEEecCCccccccCCCCEEEEch
Confidence            3556777777766654                 49999999999764     478999864          478999999


Q ss_pred             CCeeecC
Q psy7077         311 SYVEPCD  317 (336)
Q Consensus       311 nyV~~i~  317 (336)
                      |||+.++
T Consensus        77 nyVe~ie   83 (83)
T d1bb9a_          77 NFTERVQ   83 (83)
T ss_dssp             GGEEEEC
T ss_pred             hHeEEcC
Confidence            9999874

>d1t0ha_ b.34.2.1 (A:) SH3-like domain of the L-type calcium channel {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.05  E-value=5e-11  Score=90.02  Aligned_cols=49  Identities=22%  Similarity=0.509  Sum_probs=45.0

Q ss_pred             cEEEEecccCCCCCCC-------ccccCCCEEEEEee-cCCceeccc---CCCccccccc
Q psy7077         118 KYYIAAYPYDSTEPGD-------LTFNQDEVIYVTKK-ENDWWTGTI---GDRTARFRGV  166 (336)
Q Consensus       118 ~~~~al~dy~~~~~~e-------Ls~~~Gd~i~v~~~-~~~Ww~g~~---~~~~g~~p~~  166 (336)
                      .+++|+|||++..+++       |+|++||+|.|+++ |++||.|++   +|..|+||+.
T Consensus        22 ~~vrAlydY~~~~dd~~P~~~~~LsF~~GDii~v~~~~d~~WW~gr~~~~~g~~G~~PS~   81 (96)
T d1t0ha_          22 FAVRTNVRYSAAQEDDVPVPGMAISFEAKDFLHVKEKFNNDWWIGRLVKEGCEIGFIPSP   81 (96)
T ss_dssp             EEEEESSCBCCCGGGCCSSTTCBCCBCTTCEEEEEEECSSSEEEEEESSTTCCCEEEECH
T ss_pred             EEEEEeeccCCCCCCCCccccccccCCCCCEEEEeeeeCCCceEEEEcCCCCCEEEecCc
Confidence            3789999999999998       99999999999999 999999997   5788999985

>d1i1ja_ b.34.2.1 (A:) Melanoma inhibitory activity protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Melanoma inhibitory activity protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=7.4e-11  Score=91.17  Aligned_cols=56  Identities=23%  Similarity=0.242  Sum_probs=44.1

Q ss_pred             ccccCCCCcCCCCCCCccccCCCCCCCCCCCCCCCCCCEEEEEee---cCCCeEEEEeCC--------ceeEeeCCCeee
Q psy7077         247 LIAEVPENISDSGGSGIAVEEGPGIPADIPSPIMGLGTVVPVKQN---AEPGWLAGELRG--------QTGWFPESYVEP  315 (336)
Q Consensus       247 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~Lsf~~Gd~V~V~~~---~~~~W~~g~~~G--------~~G~fPsnyV~~  315 (336)
                      +.|.|+|.+.+.++|                 +|++||+|.|+++   .+++||.|+++|        ++||||+|||+.
T Consensus        24 ~~Alydy~~~~~~eL-----------------~f~~Gd~i~Vl~k~~~~~~~WW~g~~~g~~~~~~~g~~G~fP~nyV~~   86 (106)
T d1i1ja_          24 AVALQDYMAPDCRFL-----------------TIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVRE   86 (106)
T ss_dssp             EEESSCBCCSSTTBC-----------------CBCTTCEEEEEEEECGGGTTEEEEEEBCSSTTCBCSCCEEEEGGGEEE
T ss_pred             EEEccccCCCCCCCc-----------------cCCCCCEEEEEEecCCCCcceEEEEecCccccccCCcccccccccEEE
Confidence            556777777766654                 4999999999987   457899897654        689999999998


Q ss_pred             cCCC
Q psy7077         316 CDET  319 (336)
Q Consensus       316 i~~~  319 (336)
                      +...
T Consensus        87 ~~~~   90 (106)
T d1i1ja_          87 DQTL   90 (106)
T ss_dssp             EEEC
T ss_pred             cccc
Confidence            8643

>d1vyva1 b.34.2.1 (A:71-215) SH3-like domain of the L-type calcium channel {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.93  E-value=2.3e-10  Score=93.42  Aligned_cols=54  Identities=15%  Similarity=0.345  Sum_probs=46.7

Q ss_pred             eeeeeeeecccCCCCC-------CCCCCCCEEEEeeeecCCCCeEEEEe---eCceeeecccceee
Q psy7077         170 RRYRAIYEFVSRNGDE-------LSFQPGDIIMVPVKQNAEPGWLAGEL---RGQTGWFPESYVEP  225 (336)
Q Consensus       170 ~~~~al~df~a~~~~e-------Ls~~~Gdii~v~~~~~~~~gW~~g~~---~g~~G~fP~~yve~  225 (336)
                      ..++|+|||.+...++       |+|++||+|.|+.  ..+++||.|++   +|+.||||++|+.+
T Consensus        24 f~vra~~dy~~~~d~~~p~~~~~LsF~kGDii~V~~--~~d~~WW~gr~~~~~g~~G~iPS~~~~e   87 (145)
T d1vyva1          24 FAVKTNVSYCGALDEDVPVPSSAVSFDAKDFLHIKE--KYNNDWWIGRLVKEGCEIGFIPSPLRLE   87 (145)
T ss_dssp             EEEEESSCBCTTSCCSCSSTTCBCCBCTTCEEEEEE--EEETTEEEEEESSTTCCCEEEECHHHHH
T ss_pred             EEEEEeeeeCCccCCcCCcccccccCcCCCEEEEee--ccCCCcEEEEEcCCCCceeEeCCchhhh
Confidence            3689999999999887       9999999999964  46789999997   68999999987543

>d1kjwa1 b.34.2.1 (A:430-525) Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Psd-95
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.92  E-value=1.9e-10  Score=87.27  Aligned_cols=40  Identities=15%  Similarity=0.310  Sum_probs=35.7

Q ss_pred             CCCCCCCCEEEEEeecCCCeEEEEe------CCceeEeeCCCeeec
Q psy7077         277 SPIMGLGTVVPVKQNAEPGWLAGEL------RGQTGWFPESYVEPC  316 (336)
Q Consensus       277 ~Lsf~~Gd~V~V~~~~~~~W~~g~~------~G~~G~fPsnyV~~i  316 (336)
                      +|+|++||+|+|+++.+++||.|+.      +|++||||+|||+..
T Consensus        22 eLsf~kGdil~V~~~~d~~WW~~~~~~~~~~~g~~G~~Psnyv~e~   67 (96)
T d1kjwa1          22 ALSFRFGDVLHVIDAGDEEWWQARRVHSDSETDDIGFIPSKRRVER   67 (96)
T ss_dssp             BCCBCTTCEEEEEECCSSSEEEEEECCSSCCCSCCEEEECHHHHHH
T ss_pred             cceEcCCCEEEEeeeccCceEEEEEccCCCCCCCEeEEeccceeee
Confidence            3779999999999999999999974      689999999999753

>d1vyva1 b.34.2.1 (A:71-215) SH3-like domain of the L-type calcium channel {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.78  E-value=2e-09  Score=87.69  Aligned_cols=48  Identities=21%  Similarity=0.484  Sum_probs=44.4

Q ss_pred             EEEEecccCCCCCCC-------ccccCCCEEEEEee-cCCceeccc---CCCccccccc
Q psy7077         119 YYIAAYPYDSTEPGD-------LTFNQDEVIYVTKK-ENDWWTGTI---GDRTARFRGV  166 (336)
Q Consensus       119 ~~~al~dy~~~~~~e-------Ls~~~Gd~i~v~~~-~~~Ww~g~~---~~~~g~~p~~  166 (336)
                      .++|+|||.+..+++       |+|++||+|.|+++ |++||.|+.   +|+.|+||+.
T Consensus        25 ~vra~~dy~~~~d~~~p~~~~~LsF~kGDii~V~~~~d~~WW~gr~~~~~g~~G~iPS~   83 (145)
T d1vyva1          25 AVKTNVSYCGALDEDVPVPSSAVSFDAKDFLHIKEKYNNDWWIGRLVKEGCEIGFIPSP   83 (145)
T ss_dssp             EEEESSCBCTTSCCSCSSTTCBCCBCTTCEEEEEEEEETTEEEEEESSTTCCCEEEECH
T ss_pred             EEEEeeeeCCccCCcCCcccccccCcCCCEEEEeeccCCCcEEEEEcCCCCceeEeCCc
Confidence            589999999999998       99999999999999 999999986   6888999974

>d1vyua1 b.34.2.1 (A:39-174) SH3-like domain of the L-type calcium channel {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.63  E-value=6.3e-09  Score=83.51  Aligned_cols=52  Identities=17%  Similarity=0.404  Sum_probs=45.0

Q ss_pred             eeeeeeeecccCCCCC-------CCCCCCCEEEEeeeecCCCCeEEEEe---eCceeeecccce
Q psy7077         170 RRYRAIYEFVSRNGDE-------LSFQPGDIIMVPVKQNAEPGWLAGEL---RGQTGWFPESYV  223 (336)
Q Consensus       170 ~~~~al~df~a~~~~e-------Ls~~~Gdii~v~~~~~~~~gW~~g~~---~g~~G~fP~~yv  223 (336)
                      ..++|+|+|++...++       |+|++||+|.|+  ...+++||.|+.   +|..|+||++|+
T Consensus        24 ~~vra~~~Y~~~~d~~~P~~~~~LsF~~gdil~v~--~~~d~~WW~~r~~~~~~~~G~iPs~~~   85 (136)
T d1vyua1          24 FAVRTNVSYCGVLDEECPVQGSGVNFEAKDFLHIK--EKYSNDWWIGRLVKEGGDIAFIPSPQR   85 (136)
T ss_dssp             EEEEESSCEEGGGCTTCSSTTCBCEECTTCEEEEE--EECSSSEEEEEESSTTCCCEEEECHHH
T ss_pred             EEEEEeeccCCCCCCCCcccCcccCCCCCCEEEEE--eccCCCcEEEEeccCCCceeccCchHH
Confidence            4588999999988777       999999999995  557889999996   478899999984

>d1vyua1 b.34.2.1 (A:39-174) SH3-like domain of the L-type calcium channel {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.47  E-value=3.2e-08  Score=79.29  Aligned_cols=48  Identities=21%  Similarity=0.475  Sum_probs=43.1

Q ss_pred             EEEEecccCCCCCCC-------ccccCCCEEEEEee-cCCceeccc---CCCccccccc
Q psy7077         119 YYIAAYPYDSTEPGD-------LTFNQDEVIYVTKK-ENDWWTGTI---GDRTARFRGV  166 (336)
Q Consensus       119 ~~~al~dy~~~~~~e-------Ls~~~Gd~i~v~~~-~~~Ww~g~~---~~~~g~~p~~  166 (336)
                      .++|+|+|.+..+++       |+|++||+|.|+++ |++||.|+.   ++..|++|+.
T Consensus        25 ~vra~~~Y~~~~d~~~P~~~~~LsF~~gdil~v~~~~d~~WW~~r~~~~~~~~G~iPs~   83 (136)
T d1vyua1          25 AVRTNVSYCGVLDEECPVQGSGVNFEAKDFLHIKEKYSNDWWIGRLVKEGGDIAFIPSP   83 (136)
T ss_dssp             EEEESSCEEGGGCTTCSSTTCBCEECTTCEEEEEEECSSSEEEEEESSTTCCCEEEECH
T ss_pred             EEEEeeccCCCCCCCCcccCcccCCCCCCEEEEEeccCCCcEEEEeccCCCceeccCch
Confidence            588999999999888       89999999999999 999999985   4678999974

>d1ri9a_ b.34.2.1 (A:) Fyn-binding protein (T-cell adapter protein adap) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Fyn-binding protein (T-cell adapter protein adap)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.27  E-value=0.04  Score=38.18  Aligned_cols=40  Identities=20%  Similarity=0.372  Sum_probs=33.5

Q ss_pred             CCCCCCCCCCCEEEEeeeecCCCCeEEEEe-eCceeeecccce
Q psy7077         182 NGDELSFQPGDIIMVPVKQNAEPGWLAGEL-RGQTGWFPESYV  223 (336)
Q Consensus       182 ~~~eLs~~~Gdii~v~~~~~~~~gW~~g~~-~g~~G~fP~~yv  223 (336)
                      ...+|.+++|+.|.|+.  ..++|-|.|++ .|+-|+|+.++|
T Consensus        35 g~~dL~vk~GE~ldVIr--~t~~~k~LcRN~~GkYGYV~~~~l   75 (77)
T d1ri9a_          35 GTRDLQVKPGESLEVIQ--TTDDTKVLCRNEEGKYGYVLRSYL   75 (77)
T ss_dssp             CTTBCCCCTTCBCEEEE--ESSSSEEEEEETTTEEEEEEGGGS
T ss_pred             CcccCCcCCCCEEEEEE--eCCCCeEEEEcCCCcEEEEEeeee
Confidence            45699999999999964  46788889996 799999998775

>d1ri9a_ b.34.2.1 (A:) Fyn-binding protein (T-cell adapter protein adap) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Fyn-binding protein (T-cell adapter protein adap)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.19  E-value=0.07  Score=36.91  Aligned_cols=37  Identities=22%  Similarity=0.304  Sum_probs=30.0

Q ss_pred             CCCCCCCCEEEEEeecCCC-eEEEEeCCceeEeeCCCe
Q psy7077         277 SPIMGLGTVVPVKQNAEPG-WLAGELRGQTGWFPESYV  313 (336)
Q Consensus       277 ~Lsf~~Gd~V~V~~~~~~~-W~~g~~~G~~G~fPsnyV  313 (336)
                      +|.++.||.|.|++..+++ |.+....|+-|++|.++|
T Consensus        38 dL~vk~GE~ldVIr~t~~~k~LcRN~~GkYGYV~~~~l   75 (77)
T d1ri9a_          38 DLQVKPGESLEVIQTTDDTKVLCRNEEGKYGYVLRSYL   75 (77)
T ss_dssp             BCCCCTTCBCEEEEESSSSEEEEEETTTEEEEEEGGGS
T ss_pred             cCCcCCCCEEEEEEeCCCCeEEEEcCCCcEEEEEeeee
Confidence            3679999999999887664 555567899999998765