Psyllid ID: psy7253

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------12
Protein Sequence
MGLIHVSDREPLIKVSVVGSAKDVNSVPFLDSWARPAVRDCLDDLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELAPIRHNAKVAKPANGKTTFVYLFDFKR
Secondary Structure (PSIPRED)
cccEEEEEcccccccccEEHHcccccHHHHHHHcccccccccccEEEccccccccHHHHHHHHHHHHHcccccccccHHHcHHHHHHHEEccccccccccccccccccEEEEEEEEccc
Secondary Structure Prediction (SSPRO)
ccEEEEEccccHHEEcHHHHHHHcccHHHHHHHcccccccccccEEEccccHccHHHcccEEEEHHHHHHcccccccHHHHHHHHHHHHHHHccHHHcccccccccccEEEEEEEEccc
Coil and Loop (DISEMBL)
mglihvsdrepliKVSVvgsakdvnsvpfldswarpaVRDCLDdliaipdfgtgamenwglityretsilydeqetsasghNWVAVVVAHELapirhnakvakpangkttFVYLFDFKR
Flexible Loop (DISEMBL)
mglihvsdreplikvsvvgsakdvnsvpfldswarPAVRDCLDDLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELAPIrhnakvakpangkTTFVYLFDFKR
Low Complexity Region (SEG)
MGLIHVSDREPLIKVSVVGSAKDVNSVPFLDSWARPAVRDCLDDLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELAPIRHNAKVAKPANGKTTFVYLFDFKR
Disordered region (IsUnstruct)
**********PLIKVSVVGSAKDVNSVPFLDSWARPAVRDCLDDLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELAPIRHNAKVAKPANGKTTFVYLFDF**
Disordered Region (DISOPRED)
*GLIHVSDREPLIKVSVVGSAKDVNSVPFLDSWARPAVRDCLDDLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELAPIRHNAKVAKPANGKTTFVYLFDFKR
Disordered Region (DISEMBL)
MGLIHVSDREPLIKVSVVGSAKDVNSVPFLDSWARPAVRDCLDDLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELAPIRHNAKVAKPANGKTTFVYLFDFKR
Disordered Region (DISPRO)
MGLIHVSDREPLIKVSVVGSAKDVNSVPFLDSWARPAVRDCLDDLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELAPIRHNAKVAKPANGKTTFVYLFDFKR
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGLIHVSDREPLIKVSVVGSAKDVNSVPFLDSWARPAVRDCLDDLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELAPIRHNAKVAKPANGKTTFVYLFDFKR
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	119	2.2.26 [Sep-21-2011]
Q5RFP3	960	Endoplasmic reticulum ami	no	N/A	0.420	0.052	0.72	6e-15
Q07075	957	Glutamyl aminopeptidase O	yes	N/A	0.411	0.051	0.734	7e-15
Q6P179	960	Endoplasmic reticulum ami	no	N/A	0.420	0.052	0.72	1e-14
Q95334	942	Glutamyl aminopeptidase O	yes	N/A	0.411	0.052	0.734	1e-14
A6QPT7	954	Endoplasmic reticulum ami	yes	N/A	0.420	0.052	0.68	3e-14
Q32LQ0	956	Glutamyl aminopeptidase O	no	N/A	0.411	0.051	0.714	4e-14
P16406	945	Glutamyl aminopeptidase O	yes	N/A	0.411	0.051	0.693	4e-13
P50123	945	Glutamyl aminopeptidase O	yes	N/A	0.411	0.051	0.693	5e-13
P55786	919	Puromycin-sensitive amino	no	N/A	0.420	0.054	0.64	5e-13
Q11011	920	Puromycin-sensitive amino	no	N/A	0.420	0.054	0.64	5e-13

>sp|Q5RFP3|ERAP2_PONAB Endoplasmic reticulum aminopeptidase 2 OS=Pongo abelii GN=ERAP2 PE=2 SV=1

 Score = 79.3 bits (194), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 36/50 (72%), Positives = 42/50 (84%)

Query: 44  DLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELA 93
           DLIAIPDF +GAMENWGLITYRETS+L+D + +SAS   WV  V+AHELA
Sbjct: 324 DLIAIPDFASGAMENWGLITYRETSLLFDPKTSSASDKLWVTRVIAHELA 373

Aminopeptidase that plays a central role in peptide trimming, a step required for the generation of most HLA class I-binding peptides. Peptide trimming is essential to customize longer precursor peptides to fit them to the correct length required for presentation on MHC class I molecules. Preferentially hydrolyzes the basic residues Arg and Lys.
Pongo abelii (taxid: 9601)
EC: 3EC: .EC: 4EC: .EC: 1EC: 1EC: .EC: -

>sp|Q07075|AMPE_HUMAN Glutamyl aminopeptidase OS=Homo sapiens GN=ENPEP PE=1 SV=3

 Score = 79.3 bits (194), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 36/49 (73%), Positives = 42/49 (85%)

Query: 44  DLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHEL 92
           D IAIPDFGTGAMENWGLITYRET++LYD +E+++S    VA VVAHEL
Sbjct: 347 DKIAIPDFGTGAMENWGLITYRETNLLYDPKESASSNQQRVATVVAHEL 395

Appears to have a role in the catabolic pathway of the renin-angiotensin system. Probably plays a role in regulating growth and differentiation of early B-lineage cells.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: 7

>sp|Q6P179|ERAP2_HUMAN Endoplasmic reticulum aminopeptidase 2 OS=Homo sapiens GN=ERAP2 PE=1 SV=2

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 36/50 (72%), Positives = 41/50 (82%)

Query: 44  DLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELA 93
           DLIAIPDF  GAMENWGLITYRETS+L+D + +SAS   WV  V+AHELA
Sbjct: 324 DLIAIPDFAPGAMENWGLITYRETSLLFDPKTSSASDKLWVTRVIAHELA 373

Aminopeptidase that plays a central role in peptide trimming, a step required for the generation of most HLA class I-binding peptides. Peptide trimming is essential to customize longer precursor peptides to fit them to the correct length required for presentation on MHC class I molecules. Preferentially hydrolyzes the basic residues Arg and Lys.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q95334|AMPE_PIG Glutamyl aminopeptidase OS=Sus scrofa GN=ENPEP PE=1 SV=1

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 36/49 (73%), Positives = 41/49 (83%)

Query: 44  DLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHEL 92
           D IAIPDFGTGAMENWGLITYRET++LYD  E+++S    VA VVAHEL
Sbjct: 337 DKIAIPDFGTGAMENWGLITYRETNLLYDPNESASSNQQRVAAVVAHEL 385

Sus scrofa (taxid: 9823)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: 7

>sp|A6QPT7|ERAP2_BOVIN Endoplasmic reticulum aminopeptidase 2 OS=Bos taurus GN=ERAP2 PE=2 SV=1

 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 34/50 (68%), Positives = 41/50 (82%)

Query: 44  DLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELA 93
           DL+AIPDF +GAMENWGLITYRETS+L+D + +S S   WV  V+AHELA
Sbjct: 318 DLVAIPDFASGAMENWGLITYRETSLLFDPKTSSTSDKLWVTKVIAHELA 367

Aminopeptidase that plays a central role in peptide trimming, a step required for the generation of most HLA class I-binding peptides. Peptide trimming is essential to customize longer precursor peptides to fit them to the correct length required for presentation on MHC class I molecules. Preferentially hydrolyzes the basic residues Arg and Lys.

Bos taurus (taxid: 9913)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q32LQ0|AMPE_BOVIN Glutamyl aminopeptidase OS=Bos taurus GN=ENPEP PE=2 SV=1

 Score = 77.0 bits (188), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 35/49 (71%), Positives = 41/49 (83%)

Query: 44  DLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHEL 92
           D IAIPDFGTGAMENWGLITYRET++LYD  E+++S    VA V+AHEL
Sbjct: 349 DKIAIPDFGTGAMENWGLITYRETNLLYDPDESASSNKQRVAAVIAHEL 397

Appears to have a role in the catabolic pathway of the renin-angiotensin system. Probably plays a role in regulating growth and differentiation of early B-lineage cells.

Bos taurus (taxid: 9913)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: 7

>sp|P16406|AMPE_MOUSE Glutamyl aminopeptidase OS=Mus musculus GN=Enpep PE=1 SV=1

 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 34/49 (69%), Positives = 40/49 (81%)

Query: 44  DLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHEL 92
           D IAIPDFGTGAMENWGL+TYRET++LYD   +++S    VA VVAHEL
Sbjct: 339 DKIAIPDFGTGAMENWGLVTYRETNLLYDPLLSASSNQQRVASVVAHEL 387

Appears to have a role in the catabolic pathway of the renin-angiotensin system. Probably plays a role in regulating growth and differentiation of early B-lineage cells.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: 7

>sp|P50123|AMPE_RAT Glutamyl aminopeptidase OS=Rattus norvegicus GN=Enpep PE=1 SV=2

 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 34/49 (69%), Positives = 40/49 (81%)

Query: 44  DLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHEL 92
           D IAIPDFGTGAMENWGL+TYRET++LYD   +++S    VA VVAHEL
Sbjct: 339 DKIAIPDFGTGAMENWGLVTYRETNLLYDPLLSASSNQQRVASVVAHEL 387

Appears to have a role in the catabolic pathway of the renin-angiotensin system. Isoform 1 has aminopeptidase activity while isoform 2 does not.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: 7

>sp|P55786|PSA_HUMAN Puromycin-sensitive aminopeptidase OS=Homo sapiens GN=NPEPPS PE=1 SV=2

 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 32/50 (64%), Positives = 39/50 (78%)

Query: 44  DLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELA 93
           DLIAI DF  GAMENWGL+TYRET++L D + + +S   WVA+VV HELA
Sbjct: 306 DLIAIADFAAGAMENWGLVTYRETALLIDPKNSCSSSRQWVALVVGHELA 355

Aminopeptidase with broad substrate specificity for several peptides. Involved in proteolytic events essential for cell growth and viability. May act as regulator of neuropeptide activity. Plays a role in the antigen-processing pathway for MHC class I molecules. Involved in the N-terminal trimming of cytotoxic T-cell epitope precursors. Digests the poly-Q peptides found in many cellular proteins. Digests tau from normal brain more efficiently than tau from Alzheimer disease brain.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q11011|PSA_MOUSE Puromycin-sensitive aminopeptidase OS=Mus musculus GN=Npepps PE=1 SV=2

 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 32/50 (64%), Positives = 39/50 (78%)

Query: 44  DLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELA 93
           DLIAI DF  GAMENWGL+TYRET++L D + + +S   WVA+VV HELA
Sbjct: 307 DLIAIADFAAGAMENWGLVTYRETALLIDPKNSCSSSRQWVALVVGHELA 356

Aminopeptidase with broad substrate specificity for several peptides. Involved in proteolytic events essential for cell growth and viability. May act as regulator of neuropeptide activity. Plays a role in the antigen-processing pathway for MHC class I molecules. Involved in the N-terminal trimming of cytotoxic T-cell epitope precursors. Digests the poly-Q peptides found in many cellular proteins.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	119
328703032	995	PREDICTED: endoplasmic reticulum aminope	0.428	0.051	0.882	1e-18
242021367	1011	Aminopeptidase N precursor, putative [Pe	0.428	0.050	0.803	2e-17
383860399	1002	PREDICTED: endoplasmic reticulum aminope	0.428	0.050	0.843	3e-17
350412311	1004	PREDICTED: endoplasmic reticulum aminope	0.428	0.050	0.823	3e-17
340709539	1004	PREDICTED: endoplasmic reticulum aminope	0.428	0.050	0.823	3e-17
345496100	1008	PREDICTED: endoplasmic reticulum aminope	0.420	0.049	0.82	1e-16
328792853	1001	PREDICTED: endoplasmic reticulum aminope	0.428	0.050	0.764	3e-16
380023453	1001	PREDICTED: LOW QUALITY PROTEIN: endoplas	0.428	0.050	0.745	1e-15
449664062	909	PREDICTED: aminopeptidase N-like [Hydra	0.420	0.055	0.78	2e-15
260803330	636	hypothetical protein BRAFLDRAFT_283074 [	0.420	0.078	0.72	8e-15

>gi|328703032|ref|XP_003242073.1| PREDICTED: endoplasmic reticulum aminopeptidase 2-like [Acyrthosiphon pisum]

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/51 (88%), Positives = 46/51 (90%)

Query: 43  DDLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELA 93
            DLIAIPDFG GAMENWGLITYRETSILYDE+ETSA  H WVAVVVAHELA
Sbjct: 366 QDLIAIPDFGAGAMENWGLITYRETSILYDEKETSAVAHQWVAVVVAHELA 416

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242021367|ref|XP_002431116.1| Aminopeptidase N precursor, putative [Pediculus humanus corporis] gi|212516365|gb|EEB18378.1| Aminopeptidase N precursor, putative [Pediculus humanus corporis]

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 41/51 (80%), Positives = 45/51 (88%)

Query: 43  DDLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELA 93
            DLIAIPDF  GAMENWGLITYRETSILYD++ETSA  H WVA+V+AHELA
Sbjct: 396 QDLIAIPDFAAGAMENWGLITYRETSILYDQEETSAIAHQWVAIVIAHELA 446

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383860399|ref|XP_003705678.1| PREDICTED: endoplasmic reticulum aminopeptidase 2-like [Megachile rotundata]

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 43/51 (84%), Positives = 43/51 (84%)

Query: 43  DDLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELA 93
            DLIAIPDF  GAMENWGLITYRETSILYD QETS   H WVAVVVAHELA
Sbjct: 385 QDLIAIPDFAAGAMENWGLITYRETSILYDPQETSTKAHEWVAVVVAHELA 435

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350412311|ref|XP_003489605.1| PREDICTED: endoplasmic reticulum aminopeptidase 2-like [Bombus impatiens]

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/51 (82%), Positives = 44/51 (86%)

Query: 43  DDLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELA 93
            DLIAIPDF  GAMENWGLITYRETSILYD QETS + H WVA+VVAHELA
Sbjct: 387 QDLIAIPDFAAGAMENWGLITYRETSILYDPQETSTNAHEWVAIVVAHELA 437

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340709539|ref|XP_003393363.1| PREDICTED: endoplasmic reticulum aminopeptidase 2-like [Bombus terrestris]

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/51 (82%), Positives = 44/51 (86%)

Query: 43  DDLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELA 93
            DLIAIPDF  GAMENWGLITYRETSILYD QETS + H WVA+VVAHELA
Sbjct: 387 QDLIAIPDFAAGAMENWGLITYRETSILYDPQETSTNAHEWVAIVVAHELA 437

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345496100|ref|XP_001603771.2| PREDICTED: endoplasmic reticulum aminopeptidase 2-like [Nasonia vitripennis]

 Score = 90.1 bits (222), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 41/50 (82%), Positives = 43/50 (86%)

Query: 44  DLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELA 93
           DLIAIPDF  GAMENWGLITYRETSILYD  ETS + H WVAVV+AHELA
Sbjct: 392 DLIAIPDFAAGAMENWGLITYRETSILYDPSETSTAAHEWVAVVIAHELA 441

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328792853|ref|XP_395725.3| PREDICTED: endoplasmic reticulum aminopeptidase 2-like [Apis mellifera]

 Score = 89.0 bits (219), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 39/51 (76%), Positives = 44/51 (86%)

Query: 43  DDLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELA 93
            DLIAIPDFGTGAMENWGLITYRETSILYD +E+S + H W+  +VAHELA
Sbjct: 386 QDLIAIPDFGTGAMENWGLITYRETSILYDPEESSTNIHEWIGTIVAHELA 436

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380023453|ref|XP_003695537.1| PREDICTED: LOW QUALITY PROTEIN: endoplasmic reticulum aminopeptidase 2-like [Apis florea]

 Score = 86.7 bits (213), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 38/51 (74%), Positives = 43/51 (84%)

Query: 43  DDLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELA 93
            DLIAIPDF TGAMENWGLITYRETSILYD +E+S + H W+  +VAHELA
Sbjct: 386 QDLIAIPDFATGAMENWGLITYRETSILYDPEESSTNVHEWIGTIVAHELA 436

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|449664062|ref|XP_002163863.2| PREDICTED: aminopeptidase N-like [Hydra magnipapillata]

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 39/50 (78%), Positives = 44/50 (88%)

Query: 44  DLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELA 93
           DLIAIPDF  GAMENWGLITYR TSILYDE+E+S++   WVAVV+AHELA
Sbjct: 338 DLIAIPDFAAGAMENWGLITYRLTSILYDEKESSSANKQWVAVVIAHELA 387

Source: Hydra magnipapillata

Species: Hydra magnipapillata

Genus: Hydra

Family: Hydridae

Order: Hydroida

Class: Hydrozoa

Phylum: Cnidaria

Superkingdom: Eukaryota

>gi|260803330|ref|XP_002596543.1| hypothetical protein BRAFLDRAFT_283074 [Branchiostoma floridae] gi|229281801|gb|EEN52555.1| hypothetical protein BRAFLDRAFT_283074 [Branchiostoma floridae]

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 36/50 (72%), Positives = 43/50 (86%)

Query: 44 DLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELA 93
          DL+AIPDFG GAMENWGL+TYRET+ILY+  E+SAS   WVA+V+AHE A
Sbjct: 2  DLVAIPDFGAGAMENWGLVTYRETAILYNADESSASDKQWVAIVIAHEFA 51

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	119
UNIPROTKB|H0YAL8	163	ERAP2 "Endoplasmic reticulum a	0.420	0.306	0.72	8.8e-15
UNIPROTKB|Q5R7D5	957	DKFZp469K101 "Putative unchara	0.411	0.051	0.734	5.4e-14
UNIPROTKB|K7GT33	566	ENPEP "Glutamyl aminopeptidase	0.411	0.086	0.734	6.4e-14
UNIPROTKB|E2R6R0	935	ENPEP "Uncharacterized protein	0.411	0.052	0.755	8.6e-14
UNIPROTKB|F6XRM5	954	ENPEP "Uncharacterized protein	0.411	0.051	0.755	8.9e-14
UNIPROTKB|F6R0D0	957	LOC100385544 "Uncharacterized	0.411	0.051	0.734	8.9e-14
UNIPROTKB|F7GTW9	957	ENPEP "Uncharacterized protein	0.411	0.051	0.734	8.9e-14
UNIPROTKB|G7P639	957	EGM_14618 "Putative uncharacte	0.411	0.051	0.734	8.9e-14
UNIPROTKB|G1S3F9	949	ENPEP "Uncharacterized protein	0.411	0.051	0.734	1.1e-13
UNIPROTKB|G3SK36	952	ENPEP "Uncharacterized protein	0.411	0.051	0.734	1.1e-13

UNIPROTKB|H0YAL8 ERAP2 "Endoplasmic reticulum aminopeptidase 2" [Homo sapiens (taxid:9606)]

 Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
 Identities = 36/50 (72%), Positives = 41/50 (82%)

Query:    44 DLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELA 93
             DLIAIPDF  GAMENWGLITYRETS+L+D + +SAS   WV  V+AHELA
Sbjct:    31 DLIAIPDFAPGAMENWGLITYRETSLLFDPKTSSASDKLWVTRVIAHELA 80

GO:0006508 "proteolysis" evidence=IEA

GO:0008237 "metallopeptidase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q5R7D5 DKFZp469K101 "Putative uncharacterized protein DKFZp469K101" [Pongo abelii (taxid:9601)]

 Score = 193 (73.0 bits), Expect = 5.4e-14, P = 5.4e-14
 Identities = 36/49 (73%), Positives = 43/49 (87%)

Query:    44 DLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHEL 92
             D IAIPDFGTGAMENWGLITYRET++LYD +E+++S    VA+VVAHEL
Sbjct:   347 DKIAIPDFGTGAMENWGLITYRETNLLYDPKESASSNQQRVAIVVAHEL 395

GO:0003081 "regulation of systemic arterial blood pressure by renin-angiotensin" evidence=ISS

GO:0008283 "cell proliferation" evidence=ISS

GO:0016477 "cell migration" evidence=ISS

GO:0070006 "metalloaminopeptidase activity" evidence=ISS

UNIPROTKB|K7GT33 ENPEP "Glutamyl aminopeptidase" [Sus scrofa (taxid:9823)]

 Score = 189 (71.6 bits), Expect = 6.4e-14, P = 6.4e-14
 Identities = 36/49 (73%), Positives = 41/49 (83%)

Query:    44 DLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHEL 92
             D IAIPDFGTGAMENWGLITYRET++LYD  E+++S    VA VVAHEL
Sbjct:   337 DKIAIPDFGTGAMENWGLITYRETNLLYDPNESASSNQQRVAAVVAHEL 385

GO:0008270 "zinc ion binding" evidence=IEA

GO:0008237 "metallopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

UNIPROTKB|E2R6R0 ENPEP "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 191 (72.3 bits), Expect = 8.6e-14, P = 8.6e-14
 Identities = 37/49 (75%), Positives = 42/49 (85%)

Query:    44 DLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHEL 92
             D IAIPDFGTGAMENWGLITYRET++LYD QE+++S    VA VVAHEL
Sbjct:   325 DEIAIPDFGTGAMENWGLITYRETNLLYDPQESASSNQQRVASVVAHEL 373

GO:0032835 "glomerulus development" evidence=IEA

GO:0031410 "cytoplasmic vesicle" evidence=IEA

GO:0016477 "cell migration" evidence=IEA

GO:0016324 "apical plasma membrane" evidence=IEA

GO:0009897 "external side of plasma membrane" evidence=IEA

GO:0008283 "cell proliferation" evidence=IEA

GO:0005903 "brush border" evidence=IEA

GO:0004177 "aminopeptidase activity" evidence=IEA

GO:0003081 "regulation of systemic arterial blood pressure by renin-angiotensin" evidence=IEA

GO:0001525 "angiogenesis" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0008237 "metallopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

UNIPROTKB|F6XRM5 ENPEP "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 191 (72.3 bits), Expect = 8.9e-14, P = 8.9e-14
 Identities = 37/49 (75%), Positives = 42/49 (85%)

Query:    44 DLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHEL 92
             D IAIPDFGTGAMENWGLITYRET++LYD QE+++S    VA VVAHEL
Sbjct:   344 DEIAIPDFGTGAMENWGLITYRETNLLYDPQESASSNQQRVASVVAHEL 392

GO:0008270 "zinc ion binding" evidence=IEA

GO:0008237 "metallopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

UNIPROTKB|F6R0D0 LOC100385544 "Uncharacterized protein" [Callithrix jacchus (taxid:9483)]

 Score = 191 (72.3 bits), Expect = 8.9e-14, P = 8.9e-14
 Identities = 36/49 (73%), Positives = 42/49 (85%)

Query:    44 DLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHEL 92
             D IAIPDFGTGAMENWGLITYRET++LYD +E+++S    VA VVAHEL
Sbjct:   347 DKIAIPDFGTGAMENWGLITYRETNLLYDPEESASSNQQRVATVVAHEL 395

GO:0003081 "regulation of systemic arterial blood pressure by renin-angiotensin" evidence=ISS

GO:0008283 "cell proliferation" evidence=ISS

GO:0016477 "cell migration" evidence=ISS

GO:0070006 "metalloaminopeptidase activity" evidence=ISS

UNIPROTKB|F7GTW9 ENPEP "Uncharacterized protein" [Macaca mulatta (taxid:9544)]

 Score = 191 (72.3 bits), Expect = 8.9e-14, P = 8.9e-14
 Identities = 36/49 (73%), Positives = 42/49 (85%)

Query:    44 DLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHEL 92
             D IAIPDFGTGAMENWGLITYRET++LYD +E+++S    VA VVAHEL
Sbjct:   347 DKIAIPDFGTGAMENWGLITYRETNLLYDPEESASSNQQRVATVVAHEL 395

GO:0003081 "regulation of systemic arterial blood pressure by renin-angiotensin" evidence=ISS

GO:0008283 "cell proliferation" evidence=ISS

GO:0016477 "cell migration" evidence=ISS

GO:0070006 "metalloaminopeptidase activity" evidence=ISS

UNIPROTKB|G7P639 EGM_14618 "Putative uncharacterized protein" [Macaca fascicularis (taxid:9541)]

 Score = 191 (72.3 bits), Expect = 8.9e-14, P = 8.9e-14
 Identities = 36/49 (73%), Positives = 42/49 (85%)

Query:    44 DLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHEL 92
             D IAIPDFGTGAMENWGLITYRET++LYD +E+++S    VA VVAHEL
Sbjct:   347 DKIAIPDFGTGAMENWGLITYRETNLLYDPEESASSNQQRVATVVAHEL 395

GO:0003081 "regulation of systemic arterial blood pressure by renin-angiotensin" evidence=ISS

GO:0008283 "cell proliferation" evidence=ISS

GO:0016477 "cell migration" evidence=ISS

GO:0070006 "metalloaminopeptidase activity" evidence=ISS

UNIPROTKB|G1S3F9 ENPEP "Uncharacterized protein" [Nomascus leucogenys (taxid:61853)]

 Score = 190 (71.9 bits), Expect = 1.1e-13, P = 1.1e-13
 Identities = 36/49 (73%), Positives = 42/49 (85%)

Query:    44 DLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHEL 92
             D IAIPDFGTGAMENWGLITYRET++LYD +E+++S    VA VVAHEL
Sbjct:   339 DKIAIPDFGTGAMENWGLITYRETNLLYDPKESASSNQQRVATVVAHEL 387

GO:0003081 "regulation of systemic arterial blood pressure by renin-angiotensin" evidence=ISS

GO:0008283 "cell proliferation" evidence=ISS

GO:0016477 "cell migration" evidence=ISS

GO:0070006 "metalloaminopeptidase activity" evidence=ISS

UNIPROTKB|G3SK36 ENPEP "Uncharacterized protein" [Gorilla gorilla gorilla (taxid:9595)]

 Score = 190 (71.9 bits), Expect = 1.1e-13, P = 1.1e-13
 Identities = 36/49 (73%), Positives = 42/49 (85%)

Query:    44 DLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHEL 92
             D IAIPDFGTGAMENWGLITYRET++LYD +E+++S    VA VVAHEL
Sbjct:   347 DKIAIPDFGTGAMENWGLITYRETNLLYDPKESASSNQQRVATVVAHEL 395

GO:0003081 "regulation of systemic arterial blood pressure by renin-angiotensin" evidence=ISS

GO:0008283 "cell proliferation" evidence=ISS

GO:0016477 "cell migration" evidence=ISS

GO:0070006 "metalloaminopeptidase activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q974N6	APE2_SULTO	3, ., 4, ., 1, 1, ., -	0.6326	0.4033	0.0614	yes	N/A
A6QPT7	ERAP2_BOVIN	3, ., 4, ., 1, 1, ., -	0.68	0.4201	0.0524	yes	N/A
Q9USX1	APE1_SCHPO	3, ., 4, ., 1, 1, ., -	0.58	0.4117	0.0555	yes	N/A
A2RI32	AMPN_LACLM	3, ., 4, ., 1, 1, ., 2	0.5625	0.4033	0.0567	yes	N/A
P50123	AMPE_RAT	3, ., 4, ., 1, 1, ., 7	0.6938	0.4117	0.0518	yes	N/A
Q07075	AMPE_HUMAN	3, ., 4, ., 1, 1, ., 7	0.7346	0.4117	0.0512	yes	N/A
Q10730	AMPN_LACHE	3, ., 4, ., 1, 1, ., 2	0.5625	0.4033	0.0568	yes	N/A
Q9CIQ1	AMPN_LACLA	3, ., 4, ., 1, 1, ., 2	0.5625	0.4033	0.0567	yes	N/A
Q95334	AMPE_PIG	3, ., 4, ., 1, 1, ., 7	0.7346	0.4117	0.0520	yes	N/A
P16406	AMPE_MOUSE	3, ., 4, ., 1, 1, ., 7	0.6938	0.4117	0.0518	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	119
cd09601	446	cd09601, M1_APN_2, Peptidase M1 Aminopeptidase N f	8e-28
pfam01433	390	pfam01433, Peptidase_M1, Peptidase family M1	5e-22
COG0308	859	COG0308, PepN, Aminopeptidase N [Amino acid transp	2e-13
cd09602	438	cd09602, M1_APN_3, Peptidase M1 family containing	2e-07
cd09595	407	cd09595, M1, Peptidase M1 family contains aminopep	1e-05
TIGR02412	831	TIGR02412, pepN_strep_liv, aminopeptidase N, Strep	3e-05
TIGR02414	863	TIGR02414, pepN_proteo, aminopeptidase N, Escheric	0.003
cd09600	861	cd09600, M1_APN_1, Peptidase M1 family containing	0.004

>gnl|CDD|189008 cd09601, M1_APN_2, Peptidase M1 Aminopeptidase N family incudes tricorn interacting factor F3, Endoplasmic reticulum aminopeptidase 1 (ERAP1), Aminopeptidase Q (APQ)

 Score =  104 bits (263), Expect = 8e-28
 Identities = 36/50 (72%), Positives = 41/50 (82%)

Query: 44  DLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELA 93
           DL+AIPDF  GAMENWGLITYRET++LYD + +SAS    VA VVAHELA
Sbjct: 246 DLVAIPDFAAGAMENWGLITYRETALLYDPKTSSASNKQRVATVVAHELA 295

This M1 peptidase family includes eukaryotic and bacterial members: aminopeptidase N (APN), aminopeptidase Q (APQ, laeverin), endoplasmic reticulum aminopeptidase 1 (ERAP1) as well as tricorn interacting factor F3. Aminopeptidase N (APN; CD13; Alanyl aminopeptidase; EC 3.4.11.2), a Type II integral membrane protease, consists of a small N-terminal cytoplasmic domain, a single transmembrane domain and a large extracellular ectodomain that contains the active site. It preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and is present in a variety of human tissues and cell types (leukocyte, fibroblast, endothelial and epithelial cells). APN expression is dysregulated in inflammatory diseases such as chronic pain, rheumatoid arthritis, multiple sclerosis, systemic sclerosis, systemic lupus erythematosus, polymyositis/dermatomyosytis and pulmonary sarcoidosis, and is enhanced in tumor cells such as melanoma, renal, prostate, pancreas, colon, gastric and thyroid cancers. It is considered a marker of differentiation since it is predominantly expressed on stem cells and on cells of the granulocytic and monocytic lineages at distinct stages of differentiation. Thus, APN inhibition may lead to the development of anti-cancer and anti-inflammatory drugs. ERAP1 also known as endoplasmic reticulum aminopeptidase associated with antigen processing (ERAAP), adipocyte derived leucine aminopeptidase (A-LAP) or aminopeptidase regulating tumor necrosis factor receptor I (THFRI) shedding (ARTS-1), associates with the closely related ER aminopeptidase ERAP2, for the final trimming of peptides within the ER for presentation by MHC class I molecules. ERAP1 is associated with ankylosing spondylitis (AS), an inflammatory arthritis that predominantly affects the spine. ERAP1 also aids in the shedding of membrane-bound cytokine receptors. The tricorn interacting factor F3, together with factors F1 and F2, degrades the tricorn protease products, producing free amino acids, thus completing the proteasomal degradation pathway. F3 is homologous to F2, but not F1, and shows a strong preference for glutamate in the P1' position. APQ, also known as laeverin, is specifically expressed in human embryo-derived extravillous trophoblasts (EVTs) that invade the uterus during early placentation. It cleaves the N-terminal amino acid of various peptides such as angiotensin III, endokinin C, and kisspeptin-10, all expressed in the placenta in large quantities. APN is a receptor for coronaviruses, although the virus receptor interaction site seems to be distinct from the enzymatic site and aminopeptidase activity is not necessary for viral infection. APNs are also putative Cry toxin receptors. Cry1 proteins are pore-forming toxins that bind to the midgut epithelial cell membrane of susceptible insect larvae, causing extensive damage. Several different toxins, including Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ba, Cry1Ca and Cry1Fa, have been shown to bind to APNs; however, a direct role of APN in cytotoxicity has been yet to be firmly established. Length = 446

>gnl|CDD|216501 pfam01433, Peptidase_M1, Peptidase family M1

 Score = 88.5 bits (220), Expect = 5e-22
 Identities = 30/50 (60%), Positives = 38/50 (76%)

Query: 44  DLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELA 93
           D +A+PDF  GAMENWGLITYRE ++LYD   +++S    VA V+AHELA
Sbjct: 255 DQVALPDFSAGAMENWGLITYREPALLYDPGNSTSSDKQRVAEVIAHELA 304

Members of this family are aminopeptidases. The members differ widely in specificity, hydrolysing acidic, basic or neutral N-terminal residues. This family includes leukotriene-A4 hydrolase, this enzyme also has an aminopeptidase activity. Length = 390

>gnl|CDD|223385 COG0308, PepN, Aminopeptidase N [Amino acid transport and metabolism]

 Score = 64.8 bits (158), Expect = 2e-13
 Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 3/55 (5%)

Query: 44  DLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELAPIRHN 98
           D++A+PDF  GAMENWGL+T+RE  +L D +  + S +  V  V+AHELA   H 
Sbjct: 267 DIVAVPDFSAGAMENWGLVTFREKYLLADPETATDSDYENVEEVIAHELA---HQ 318

Length = 859

>gnl|CDD|189009 cd09602, M1_APN_3, Peptidase M1 family containing Aminopeptidase N

 Score = 47.2 bits (113), Expect = 2e-07
 Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 2/50 (4%)

Query: 44  DLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELA 93
           D + +P+F  GAMEN G +T+RE  +  +E  T+A      A  +AHE+A
Sbjct: 244 DQVFVPEFNFGAMENPGCVTFRENYVFREE-VTTAQ-RLRRANTIAHEMA 291

This family contains bacterial and eukaryotic aminopeptidase N (APN; CD13; Alanyl aminopeptidase; EC 3.4.11.2), a Type II integral membrane protease belonging to the M1 gluzincin family. APN consists of a small N-terminal cytoplasmic domain, a single transmembrane domain and a large extracellular ectodomain that contains the active site. It preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and, in higher eukaryotes, is present in a variety of human tissues and cell types (leukocyte, fibroblast, endothelial and epithelial cells). APN expression is dysregulated in inflammatory diseases such as chronic pain, rheumatoid arthritis, multiple sclerosis, systemic sclerosis, systemic lupus erythematosus, polymyositis/dermatomyosytis and pulmonary sarcoidosis, and is enhanced in tumor cells such as melanoma, renal, prostate, pancreas, colon, gastric and thyroid cancers. It is predominantly expressed on stem cells and on cells of the granulocytic and monocytic lineages at distinct stages of differentiation, thus considered a marker of differentiation. Thus, APN inhibition may lead to the development of anti-cancer and anti-inflammatory drugs. APNs are also present in many pathogenic bacteria and represent potential drug targets, Some APNs have been used commercially, such as one from Lactococcus lactis used in the food industry. APN also serves as a receptor for coronaviruses, although the virus receptor interaction site seems to be distinct from the enzymatic site and aminopeptidase activity is not necessary for viral infection. APNs have also been extensively studied as putative Cry toxin receptors. Cry1 proteins are pore-forming toxins that bind to the midgut epithelial cell membrane of susceptible insect larvae, causing extensive damage. Several different toxins, including Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ba, Cry1Ca and Cry1Fa, have been shown to bind to APNs; however, a direct role of APN in cytotoxicity has been yet to be firmly established. Length = 438

>gnl|CDD|189002 cd09595, M1, Peptidase M1 family contains aminopeptidase N and leukotriene A4 hydrolase

 Score = 42.4 bits (100), Expect = 1e-05
 Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 4/50 (8%)

Query: 44  DLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELA 93
           D++ +P+F +GAMEN GLI + ++ +L       A     +  V+AHELA
Sbjct: 232 DVVEVPEFPSGAMENPGLIFFSQSLLLAMI---DAGDEL-LENVIAHELA 277

M1 Peptidase family includes aminopeptidase N (APN) and leukotriene A4 hydrolase (LTA4H). All peptidases in this family bind a single catalytic zinc ion which is tetrahedrally co-ordinated by three amino acid ligands and a water molecule that forms the nucleophile on activation during catalysis. APN consists of a small N-terminal cytoplasmic domain, a single transmembrane domain and a large extracellular ectodomain that contains the active site. It preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and is present in a variety of human tissues and cell types. APN expression is dysregulated in many inflammatory diseases and is enhanced in numerous tumor cells, making it a lead target in the development of anti-cancer and anti-inflammatory drugs. LTA4H is a bifunctional enzyme, possessing an aminopeptidase as well as an epoxide hydrolase activity. The two activities occupy different, but overlapping sites. The activity and physiological relevance of the aminopeptidase in LTA4H is as yet unknown while the epoxide hydrolase converts leukotriene A4 (LTA4) into leukotriene B4 (LTB4), a potent chemotaxin that is fundamental to the inflammatory response of mammals. Length = 407

>gnl|CDD|233857 TIGR02412, pepN_strep_liv, aminopeptidase N, Streptomyces lividans type

 Score = 41.3 bits (97), Expect = 3e-05
 Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 2/50 (4%)

Query: 44  DLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELA 93
           D I +P+F  GAMEN G +T+ E + L+  + T A   N  A V+ HE+A
Sbjct: 249 DQIFVPEFNAGAMENAGCVTFAE-NFLHRAEATRAEKEN-RAGVILHEMA 296

This family is a subset of the members of the zinc metallopeptidase family M1 (pfam01433), with a single member characterized in Streptomyces lividans 66 and designated aminopeptidase N. The spectrum of activity may differ somewhat from the aminopeptidase N clade of E. coli and most other Proteobacteria, well separated phylogenetically within the M1 family. The M1 family also includes leukotriene A-4 hydrolase/aminopeptidase (with a bifunctional active site). Length = 831

>gnl|CDD|233858 TIGR02414, pepN_proteo, aminopeptidase N, Escherichia coli type

 Score = 35.8 bits (83), Expect = 0.003
 Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 6/54 (11%)

Query: 42  LDD--LIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAV--VVAHE 91
           LD   ++A+ DF  GAMEN GL  +    +L D +  +A+  ++  +  V+AHE
Sbjct: 239 LDIFMIVAVDDFNMGAMENKGLNIFNSKYVLADPE--TATDADYERIESVIAHE 290

The M1 family of zinc metallopeptidases contains a number of distinct, well-separated clades of proteins with aminopeptidase activity. Several are designated aminopeptidase N, EC 3.4.11.2, after the Escherichia coli enzyme, suggesting a similar activity profile (see SP|P04825 for a description of catalytic activity). This family consists of all aminopeptidases closely related to E. coli PepN and presumed to have similar (not identical) function. Nearly all are found in Proteobacteria, but members are found also in Cyanobacteria, plants, and apicomplexan parasites. This family differs greatly in sequence from the family of aminopeptidases typified by Streptomyces lividans PepN (TIGR02412), from the membrane bound aminopeptidase N family in animals, etc [Protein fate, Degradation of proteins, peptides, and glycopeptides]. Length = 863

>gnl|CDD|189007 cd09600, M1_APN_1, Peptidase M1 family containing Aminopeptidase N

 Score = 35.3 bits (82), Expect = 0.004
 Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 4/49 (8%)

Query: 45  LIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAV--VVAHE 91
           ++A+ DF  GAMEN GL  +    +L D +  +A+  ++  +  V+ HE
Sbjct: 244 IVAVDDFNMGAMENKGLNIFNSKLVLADPE--TATDADYERIESVIGHE 290

This family contains aminopeptidase N (APN; CD13; Alanyl aminopeptidase; EC 3.4.11.2), a Type II integral membrane protease belonging to the M1 gluzincin family. It includes bacterial-type alanyl aminopeptidases as well as PfA-M1 aminopeptidase (Plasmodium falciparum-type). APN consists of a small N-terminal cytoplasmic domain, a single transmembrane domain and a large extracellular ectodomain that contains the active site. It preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and, in higher eukaryotes, is present in a variety of human tissues and cell types (leukocyte, fibroblast, endothelial and epithelial cells). APN expression is dysregulated in inflammatory diseases such as chronic pain, rheumatoid arthritis, multiple sclerosis, systemic sclerosis, systemic lupus erythematosus, polymyositis/dermatomyosytis and pulmonary sarcoidosis, and is enhanced in tumor cells such as melanoma, renal, prostate, pancreas, colon, gastric and thyroid cancers. It is predominantly expressed on stem cells and on cells of the granulocytic and monocytic lineages at distinct stages of differentiation, thus considered a marker of differentiation. Thus, APN inhibition may lead to the development of anti-cancer and anti-inflammatory drugs. APNs are also present in many pathogenic bacteria and represent potential drug targets, Some APNs have been used commercially, such as one from Lactococcus lactis used in the food industry. APN also serves as a receptor for coronaviruses, although the virus receptor interaction site seems to be distinct from the enzymatic site and aminopeptidase activity is not necessary for viral infection. APNs have also been extensively studied as putative Cry toxin receptors. Cry1 proteins are pore-forming toxins that bind to the midgut epithelial cell membrane of susceptible insect larvae, causing extensive damage. Several different toxins, including Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ba, Cry1Ca and Cry1Fa, have been shown to bind to APNs; however, a direct role of APN in cytotoxicity has been yet to be firmly established. Length = 861

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	119
KOG1046|consensus	882		100.0
TIGR02412	831	pepN_strep_liv aminopeptidase N, Streptomyces livi	99.97
PF01433	390	Peptidase_M1: Peptidase family M1 This is family M	99.97
TIGR02414	863	pepN_proteo aminopeptidase N, Escherichia coli typ	99.97
PRK14015	875	pepN aminopeptidase N; Provisional	99.97
COG0308	859	PepN Aminopeptidase N [Amino acid transport and me	99.95
TIGR02411	601	leuko_A4_hydro leukotriene A-4 hydrolase/aminopept	99.93
KOG1047|consensus	613		99.8
KOG1932|consensus	1180		98.54
PF13485	128	Peptidase_MA_2: Peptidase MA superfamily	98.26
COG3975	558	Predicted protease with the C-terminal PDZ domain	96.21
PF10026	195	DUF2268: Predicted Zn-dependent protease (DUF2268)	95.08
COG4324	376	Predicted aminopeptidase [General function predict	93.85
PF10023	337	DUF2265: Predicted aminopeptidase (DUF2265); Inter	93.4
PF12315	212	DUF3633: Protein of unknown function (DUF3633); In	91.79
smart00731	146	SprT SprT homologues. Predicted to have roles in t	91.01
PF06114	122	DUF955: Domain of unknown function (DUF955); Inter	88.41
PRK04860	160	hypothetical protein; Provisional	88.33
PRK04351	149	hypothetical protein; Provisional	84.9
COG4783	484	Putative Zn-dependent protease, contains TPR repea	83.49
PF10263	157	SprT-like: SprT-like family; InterPro: IPR006640 T	83.38
PF04450	205	BSP: Peptidase of plants and bacteria; InterPro: I	82.9
PF12725	318	DUF3810: Protein of unknown function (DUF3810); In	81.92

>KOG1046|consensus

Probab=100.00  E-value=1.8e-36  Score=260.46  Aligned_cols=110  Identities=37%  Similarity=0.559  Sum_probs=103.7

Q ss_pred             CCCCeEEEEEEcCCCCC-----------chhHHHHhhCCCCCCCccCEEEeCCCCCccccccccceeeccceeccCCCCc
Q psy7253           9 REPLIKVSVVGSAKDVN-----------SVPFLDSWARPAVRDCLDDLIAIPDFGTGAMENWGLITYRETSILYDEQETS   77 (119)
Q Consensus         9 ~~~~i~v~v~~~~~~~~-----------~l~~~e~~~~~~yp~~kld~v~~P~~~~~~men~Gli~~~e~~ll~~~~~~~   77 (119)
                      +..|++||+|++|+..+           .++|+++||+++||++|+|+|++|+|..|||||||||+|+|..+|+++..++
T Consensus       238 ~~~~v~vrv~a~p~~~~~~~~al~~~~~~L~~~e~~f~i~yPLpK~D~iavPdf~~GAMENwGLvtyre~~lL~~~~~ss  317 (882)
T KOG1046|consen  238 TKSGVPVRVYARPEKINQGQFALEVATKVLEFYEDYFGIPYPLPKLDLVAVPDFSAGAMENWGLVTYRETALLYDPQTSS  317 (882)
T ss_pred             cCCCceEEEEeChHHhhHHHHHHHHHHHHHHHHHHHhCCCCCCccccEEecCCccccchhcCcceeeeehhhccCCCcCc
Confidence            67789999999998764           4678999999999999999999999999999999999999999999999899


Q ss_pred             cccchhhhhhHhhhhhHhhhcCCCCCC-------ChhHHHHHhhhhhc
Q psy7253          78 ASGHNWVAVVVAHELAPIRHNAKVAKP-------ANGKTTFVYLFDFK  118 (119)
Q Consensus        78 ~~~~~~~~~~iaHEiaHqWfGnlVt~~-------~EG~a~y~~~~~~~  118 (119)
                      .+++++++.+||||+||||||||||++       |||||+|++++..+
T Consensus       318 ~~~k~~va~vIaHElAHQWFGNLVTm~wW~dLWLnEGfAt~~~~~~v~  365 (882)
T KOG1046|consen  318 SSNKQRVAEVIAHELAHQWFGNLVTMKWWNDLWLNEGFATYVEYLAVD  365 (882)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcccHhhhhhhhhcccHHHHHHHHhhc
Confidence            999999999999999999999999999       99999999998754

>TIGR02412 pepN_strep_liv aminopeptidase N, Streptomyces lividans type

Probab=99.97  E-value=1.1e-31  Score=229.99  Aligned_cols=109  Identities=18%  Similarity=0.203  Sum_probs=94.2

Q ss_pred             eCCCCeEEEEEEcCCCCC-------------chhHHHHhhCCCCCCCccCEEEeCCCCCccccccccceeeccceeccCC
Q psy7253           8 DREPLIKVSVVGSAKDVN-------------SVPFLDSWARPAVRDCLDDLIAIPDFGTGAMENWGLITYRETSILYDEQ   74 (119)
Q Consensus         8 ~~~~~i~v~v~~~~~~~~-------------~l~~~e~~~~~~yp~~kld~v~~P~~~~~~men~Gli~~~e~~ll~~~~   74 (119)
                      .+.+|+||++|++|+..+             .+++++++||+|||++|+|+|++|+|..|||||||+|+|+|..+ +.+.
T Consensus       200 ~~~~gvpi~v~~~~~~~~~~~~~~al~~~~~~l~~~e~~fg~pYP~~k~d~V~vP~f~~GaMEn~Glit~~e~~l-~~~~  278 (831)
T TIGR02412       200 DESRSYPLGIYARRSLAQYLDADAIFTITRQGLAFFHRKFGYPYPFKKYDQIFVPEFNAGAMENAGCVTFAENFL-HRAE  278 (831)
T ss_pred             ecCCCEEEEEEECcchhhhhhHHHHHHHHHHHHHHHHHHhCCCCCcccCCEEEcCCCCCCcccccceeeechhhc-cCCc
Confidence            356899999999997532             35789999999999999999999999999999999999999964 4443


Q ss_pred             CCccccchhhhhhHhhhhhHhhhcCCCCCC-------ChhHHHHHhhhhhc
Q psy7253          75 ETSASGHNWVAVVVAHELAPIRHNAKVAKP-------ANGKTTFVYLFDFK  118 (119)
Q Consensus        75 ~~~~~~~~~~~~~iaHEiaHqWfGnlVt~~-------~EG~a~y~~~~~~~  118 (119)
                       .+...++.++.+||||+|||||||+||++       |||||+|+++++.+
T Consensus       279 -~~~~~~~~~~~viaHElAHqWFGnlVT~~wW~dlWLnEGFAty~e~~~~~  328 (831)
T TIGR02412       279 -ATRAEKENRAGVILHEMAHMWFGDLVTMRWWNDLWLNESFAEYMGTLASA  328 (831)
T ss_pred             -CCHHHHHHHHHHHHHHHHHHHhCCEeccccccchhHHHHHHHHHHHHHHH
Confidence             33455677889999999999999999999       99999999988754

This family is a subset of the members of the zinc metallopeptidase family M1 (pfam01433), with a single member characterized in Streptomyces lividans 66 and designated aminopeptidase N. The spectrum of activity may differ somewhat from the aminopeptidase N clade of E. coli and most other Proteobacteria, well separated phylogenetically within the M1 family. The M1 family also includes leukotriene A-4 hydrolase/aminopeptidase (with a bifunctional active site).

>PF01433 Peptidase_M1: Peptidase family M1 This is family M1 in the peptidase classification

Probab=99.97  E-value=2.1e-31  Score=209.11  Aligned_cols=109  Identities=29%  Similarity=0.465  Sum_probs=93.6

Q ss_pred             CCCeEEEEEEcCCCCCc-----------hhHHHHhhCCCCCCCccCEEEeCCCCCccccccccceeeccceeccCCCCcc
Q psy7253          10 EPLIKVSVVGSAKDVNS-----------VPFLDSWARPAVRDCLDDLIAIPDFGTGAMENWGLITYRETSILYDEQETSA   78 (119)
Q Consensus        10 ~~~i~v~v~~~~~~~~~-----------l~~~e~~~~~~yp~~kld~v~~P~~~~~~men~Gli~~~e~~ll~~~~~~~~   78 (119)
                      .+|++|++|++|+..+.           ++++++++|.+||++|+|+|++|+|+.+||||||+|+|+|+.++++++.++.
T Consensus       210 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~yp~~k~~~v~~p~~~~~~me~~g~i~~~~~~l~~~~~~~~~  289 (390)
T PF01433_consen  210 KSGVPVRVYARPGDEEQLQFALDIAPKALEYYEEYFGIPYPFKKLDIVAVPDFPFGGMENWGLITYRESYLLYDPDISTI  289 (390)
T ss_dssp             TTEEEEEEEEECTCGGGHHHHHHHHHHHHHHHHHHHTS--SSSEEEEEEEST-SSSEE--TTEEEEEGGGTS-STTTS-H
T ss_pred             ccccchheeehhhhHHHHHHHHHhhHHHHHHHHhhccccceecceeEEEEeccccccccccccccccccccccCcccccc
Confidence            34699999999997654           4689999999999999999999999999999999999999999999888887


Q ss_pred             ccchhhhhhHhhhhhHhhhcCCCCCC-------ChhHHHHHhhhhhc
Q psy7253          79 SGHNWVAVVVAHELAPIRHNAKVAKP-------ANGKTTFVYLFDFK  118 (119)
Q Consensus        79 ~~~~~~~~~iaHEiaHqWfGnlVt~~-------~EG~a~y~~~~~~~  118 (119)
                      .++..+..+||||+|||||||+||++       +||||+|+++++.+
T Consensus       290 ~~~~~~~~~iahElahqWfGn~vt~~~w~d~WL~Eg~a~y~~~~~~~  336 (390)
T PF01433_consen  290 GDKQEIASLIAHELAHQWFGNLVTPKWWSDLWLNEGFATYLEYLILE  336 (390)
T ss_dssp             HHHHHHHHHHHHHHHTTTBTTTEEESSGGGHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhhHHHHHHHHHHHHhccCCccccchhhhHHHHHHHHHHHHhHh
Confidence            78888999999999999999999999       99999999998765

; InterPro: IPR014782 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to the MEROPS peptidase family M1 (clan MA(E)), the type example being aminopeptidase N from Homo sapiens (Human). The protein fold of the peptidase domain for members of this family resembles that of thermolysin, the type example for clan MA. Membrane alanine aminopeptidase (3.4.11.2 from EC) is part of the HEXXH+E group; it consists entirely of aminopeptidases, spread across a wide variety of species []. Functional studies show that CD13/APN catalyzes the removal of single amino acids from the amino terminus of small peptides and probably plays a role in their final digestion; one family member (leukotriene-A4 hydrolase) is known to hydrolyse the epoxide leukotriene-A4 to form an inflammatory mediator []. This hydrolase has been shown to have aminopeptidase activity [], and the zinc ligands of the M1 family were identified by site-directed mutagenesis on this enzyme [] CD13 participates in trimming peptides bound to MHC class II molecules [] and cleaves MIP-1 chemokine, which alters target cell specificity from basophils to eosinophils []. CD13 acts as a receptor for specific strains of RNA viruses (coronaviruses) which cause a relatively large percentage of upper respiratory trace infections. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0008237 metallopeptidase activity, 0008270 zinc ion binding; PDB: 2XQ0_A 2XPY_A 2XPZ_A 3SE6_B 3EBH_A 3EBG_A 3T8V_A 3Q44_A 3Q43_A 3EBI_A ....

>TIGR02414 pepN_proteo aminopeptidase N, Escherichia coli type

Probab=99.97  E-value=2.7e-31  Score=227.85  Aligned_cols=108  Identities=19%  Similarity=0.187  Sum_probs=96.7

Q ss_pred             CCCCeEEEEEEcCCCCC-----------chhHHHHhhCCCCCCCccCEEEeCCCCCccccccccceeeccceeccCCCCc
Q psy7253           9 REPLIKVSVVGSAKDVN-----------SVPFLDSWARPAVRDCLDDLIAIPDFGTGAMENWGLITYRETSILYDEQETS   77 (119)
Q Consensus         9 ~~~~i~v~v~~~~~~~~-----------~l~~~e~~~~~~yp~~kld~v~~P~~~~~~men~Gli~~~e~~ll~~~~~~~   77 (119)
                      ..+++++++|++|+..+           .++|+|++||++||++|+|+|++|+|+.|||||||+++|+++.+|.++...+
T Consensus       197 sg~~v~l~iy~~p~~~~~~~~al~~~~~~L~~~E~~fG~pYPl~k~diVavpdf~~GaMEN~GLi~f~e~~lL~~~~~~t  276 (863)
T TIGR02414       197 SGREVALRVYVEEGNKDKCDHAMESLKKAMKWDEEVFGLEYDLDIFMIVAVDDFNMGAMENKGLNIFNSKYVLADPETAT  276 (863)
T ss_pred             CCCceEEEEEEccCcHHHHHHHHHHHHHHHHHHHHHhCCCCChhhccEEecCCCCCccccccceeccccceEEeCCCCCC
Confidence            34678999999997643           4678999999999999999999999999999999999999999999887666


Q ss_pred             cccchhhhhhHhhhhhHhhhcCCCCCC-------ChhHHHHHhhhh
Q psy7253          78 ASGHNWVAVVVAHELAPIRHNAKVAKP-------ANGKTTFVYLFD  116 (119)
Q Consensus        78 ~~~~~~~~~~iaHEiaHqWfGnlVt~~-------~EG~a~y~~~~~  116 (119)
                      ..++..+..+||||+|||||||+||++       |||||+|++.++
T Consensus       277 d~~~~~i~~VIaHElaHqWfGNlVT~~~W~~LWLnEGfAty~e~~~  322 (863)
T TIGR02414       277 DADYERIESVIAHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEF  322 (863)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcceeeecchhhhhhhhhHHHHHHHHH
Confidence            666778899999999999999999999       999999999654

The M1 family of zinc metallopeptidases contains a number of distinct, well-separated clades of proteins with aminopeptidase activity. Several are designated aminopeptidase N, EC 3.4.11.2, after the Escherichia coli enzyme, suggesting a similar activity profile. This family consists of all aminopeptidases closely related to E. coli PepN and presumed to have similar (not identical) function. Nearly all are found in Proteobacteria, but members are found also in Cyanobacteria, plants, and apicomplexan parasites. This family differs greatly in sequence from the family of aminopeptidases typified by Streptomyces lividans PepN (TIGR02412), from the membrane bound aminopeptidase N family in animals, etc.

>PRK14015 pepN aminopeptidase N; Provisional

Probab=99.97  E-value=3.7e-31  Score=227.33  Aligned_cols=107  Identities=20%  Similarity=0.204  Sum_probs=95.8

Q ss_pred             CCCeEEEEEEcCCCC-----------CchhHHHHhhCCCCCCCccCEEEeCCCCCccccccccceeeccceeccCCCCcc
Q psy7253          10 EPLIKVSVVGSAKDV-----------NSVPFLDSWARPAVRDCLDDLIAIPDFGTGAMENWGLITYRETSILYDEQETSA   78 (119)
Q Consensus        10 ~~~i~v~v~~~~~~~-----------~~l~~~e~~~~~~yp~~kld~v~~P~~~~~~men~Gli~~~e~~ll~~~~~~~~   78 (119)
                      .++++|++|++|+..           +.++|+|++||++||++|+|+|++|+|+.|||||||+++|++..++.++...+.
T Consensus       211 g~~vpl~iy~~p~~~~~~~~al~~~~~~L~~~E~~FG~pYP~~k~diVavp~f~~GaMEN~Gl~~f~~~~lL~~~~~~t~  290 (875)
T PRK14015        211 GREVALEIYVEPGNLDKCDHAMDSLKKSMKWDEERFGLEYDLDIFMIVAVDDFNMGAMENKGLNIFNSKYVLADPETATD  290 (875)
T ss_pred             CCeEEEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhCCCCChhhhCEEeCCCCCCcccccccccccccceEecCcccCCH
Confidence            356999999999764           356789999999999999999999999999999999999999999988775566


Q ss_pred             ccchhhhhhHhhhhhHhhhcCCCCCC-------ChhHHHHHhhhh
Q psy7253          79 SGHNWVAVVVAHELAPIRHNAKVAKP-------ANGKTTFVYLFD  116 (119)
Q Consensus        79 ~~~~~~~~~iaHEiaHqWfGnlVt~~-------~EG~a~y~~~~~  116 (119)
                      .++..+..+||||+|||||||+||++       |||||+|++..+
T Consensus       291 ~~~~~i~~vIaHElaHqWFGNlVT~~~W~dLWLnEGFAty~e~~~  335 (875)
T PRK14015        291 ADYERIESVIAHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEF  335 (875)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCcceecchhhhhhhhHHHHHHHHHH
Confidence            66777899999999999999999998       999999997654

>COG0308 PepN Aminopeptidase N [Amino acid transport and metabolism]

Probab=99.95  E-value=1.7e-28  Score=210.88  Aligned_cols=107  Identities=30%  Similarity=0.430  Sum_probs=97.4

Q ss_pred             CCeEEEEEEcCCC-----------CCchhHHHHhhCCCCCCCccCEEEeCCCCCccccccccceeeccceeccCCCCccc
Q psy7253          11 PLIKVSVVGSAKD-----------VNSVPFLDSWARPAVRDCLDDLIAIPDFGTGAMENWGLITYRETSILYDEQETSAS   79 (119)
Q Consensus        11 ~~i~v~v~~~~~~-----------~~~l~~~e~~~~~~yp~~kld~v~~P~~~~~~men~Gli~~~e~~ll~~~~~~~~~   79 (119)
                      +++++++|+++..           .++++|++++||.+||+++ ++|++|+|+.|||||||+++|++..+|.++...+..
T Consensus       224 ~~v~l~iy~~~g~~~~a~~~~~~~~~~~~~~e~~fg~~y~l~~-~~V~v~~f~~GaMEN~Gl~tf~~~~ll~~~~~at~~  302 (859)
T COG0308         224 RDVPLEIYVPPGVLDRAKYALDETKRSIEFYEEYFGLPYALPI-DIVAVPDFSAGAMENWGLVTFREKYLLADPETATDS  302 (859)
T ss_pred             CCeeEEEEecCcchhhhhhhHHHHHHHhhhHHHhcCCCCCCcc-cEEeccCCCCccccccceeEEeeeEEeeCcccchhH
Confidence            5899999999933           2467899999999999999 999999999999999999999999999887767777


Q ss_pred             cchhhhhhHhhhhhHhhhcCCCCCC-------ChhHHHHHhhhhhc
Q psy7253          80 GHNWVAVVVAHELAPIRHNAKVAKP-------ANGKTTFVYLFDFK  118 (119)
Q Consensus        80 ~~~~~~~~iaHEiaHqWfGnlVt~~-------~EG~a~y~~~~~~~  118 (119)
                      .++.++.+|+||+|||||||+||++       |||||+|++..+.+
T Consensus       303 ~~~~~~~viaHElaHqWfGnlVT~~~W~~lWLnEgfat~~e~~~~~  348 (859)
T COG0308         303 DYENVEEVIAHELAHQWFGNLVTMKWWDDLWLNEGFATFREVLWSE  348 (859)
T ss_pred             HHHHHHHHHHHHHhhhcccceeeccCHHHHHHhhhhHHHHHHHHHH
Confidence            7788999999999999999999999       99999999987754

>TIGR02411 leuko_A4_hydro leukotriene A-4 hydrolase/aminopeptidase

Probab=99.93  E-value=9.4e-27  Score=193.97  Aligned_cols=98  Identities=20%  Similarity=0.184  Sum_probs=78.4

Q ss_pred             CCCeEEEEEEcCCCCC------------chhHHHHhhCCCCCCCccCEEEe-CCCCCccccccccceeeccceeccCCCC
Q psy7253          10 EPLIKVSVVGSAKDVN------------SVPFLDSWARPAVRDCLDDLIAI-PDFGTGAMENWGLITYRETSILYDEQET   76 (119)
Q Consensus        10 ~~~i~v~v~~~~~~~~------------~l~~~e~~~~~~yp~~kld~v~~-P~~~~~~men~Gli~~~e~~ll~~~~~~   76 (119)
                      ..|..+++|++|+..+            .+++++++ +.|||++|+|+|++ |+|+.||||||| ++|.+..++.+.   
T Consensus       202 ~~g~~~~v~~~p~~~~~~~~~~~~~~~~~l~~~e~~-~~pYp~~k~d~vvlpp~f~~GgMEN~~-ltf~~~~ll~~d---  276 (601)
T TIGR02411       202 PIGPRSSVYSEPEQLEKCQYEFEHDTENFIKTAEDL-IFPYEWGQYDLLVLPPSFPYGGMENPN-LTFATPTLIAGD---  276 (601)
T ss_pred             ccCCceEEEccchhHHHHHHHHHHhHHHHHHHHHHh-CCCCcCccceEEEecCccccccccccc-ceeeccccccCC---
Confidence            3467899999986443            34455666 45899999999987 799999999999 577777766432   


Q ss_pred             ccccchhhhhhHhhhhhHhhhcCCCCCC-------ChhHHHHHhhhhh
Q psy7253          77 SASGHNWVAVVVAHELAPIRHNAKVAKP-------ANGKTTFVYLFDF  117 (119)
Q Consensus        77 ~~~~~~~~~~~iaHEiaHqWfGnlVt~~-------~EG~a~y~~~~~~  117 (119)
                          + ....+||||||||||||+||++       |||||+|+|+...
T Consensus       277 ----~-s~~~viaHElAHqWfGNlVT~~~W~d~WLnEGfaty~e~~~~  319 (601)
T TIGR02411       277 ----R-SNVDVIAHELAHSWSGNLVTNCSWEHFWLNEGWTVYLERRIV  319 (601)
T ss_pred             ----h-hhhhhHHHHHHhhccCceeecCCchHHHHHhhHHHHHHHHHH
Confidence                1 2357999999999999999999       9999999998654

Members of this family represent a distinctive subset within the zinc metallopeptidase family M1 (pfam01433). The majority of the members of pfam01433 are aminopeptidases, but the sequences in this family for which the function is known are leukotriene A-4 hydrolase. A dual epoxide hydrolase and aminopeptidase activity at the same active site is indicated. The physiological substrate for aminopeptidase activity is not known.

>KOG1047|consensus

Probab=99.80  E-value=3.4e-20  Score=151.26  Aligned_cols=101  Identities=21%  Similarity=0.175  Sum_probs=78.8

Q ss_pred             EEeeCCCCeEEEEEEcCCCCCc------------hhHHHHhhCCCCCCCccCEEEeC-CCCCccccccccceeeccceec
Q psy7253           5 HVSDREPLIKVSVVGSAKDVNS------------VPFLDSWARPAVRDCLDDLIAIP-DFGTGAMENWGLITYRETSILY   71 (119)
Q Consensus         5 ~~~~~~~~i~v~v~~~~~~~~~------------l~~~e~~~~~~yp~~kld~v~~P-~~~~~~men~Gli~~~e~~ll~   71 (119)
                      .++..+-|..-+||++|...++            |+-.|+.+| ||++..+|+|++| +|+.|||||+-+.+.. ..+|-
T Consensus       206 ~L~s~eIgpRs~VwaEp~~~~a~~~ef~~~~e~~L~~Ae~l~G-pY~WgryDllvlPpSFP~gGMENPcltF~T-pTlla  283 (613)
T KOG1047|consen  206 DLESREIGPRSRVWAEPCLLDACQEEFAGETEDFLKAAEKLFG-PYVWGRYDLLVLPPSFPFGGMENPCLTFVT-PTLLA  283 (613)
T ss_pred             cccccccCCccceecchhhhHHHHHHHHhhhHHHHHHHHHHcC-CcccccceEEEecCCCCcccccCcceeeec-chhhc
Confidence            3455566777899999976543            344567887 6999999999975 9999999999655444 44443


Q ss_pred             cCCCCccccchhhhhhHhhhhhHhhhcCCCCCC-------ChhHHHHHhhh
Q psy7253          72 DEQETSASGHNWVAVVVAHELAPIRHNAKVAKP-------ANGKTTFVYLF  115 (119)
Q Consensus        72 ~~~~~~~~~~~~~~~~iaHEiaHqWfGnlVt~~-------~EG~a~y~~~~  115 (119)
                      . +       .....+|||||||-|||||||..       ||||++|+|.-
T Consensus       284 G-D-------rsl~~vIaHEIAHSWtGNlVTN~sWehfWLNEGfTvylErr  326 (613)
T KOG1047|consen  284 G-D-------RSLVDVIAHEIAHSWTGNLVTNASWEHFWLNEGFTVYLERR  326 (613)
T ss_pred             C-C-------cchhhHHHHHhhhhhcccccccCccchhhhcccchhhhhhh
Confidence            2 2       23478999999999999999999       99999999874

>KOG1932|consensus

Probab=98.54  E-value=1e-07  Score=83.58  Aligned_cols=114  Identities=10%  Similarity=0.049  Sum_probs=91.3

Q ss_pred             cceEEeeCCCCeEEEEEEcCCCCC-----------chhHHHHhhCCCCCCCccCEEEeCCCCCccccccccceeecccee
Q psy7253           2 GLIHVSDREPLIKVSVVGSAKDVN-----------SVPFLDSWARPAVRDCLDDLIAIPDFGTGAMENWGLITYRETSIL   70 (119)
Q Consensus         2 ~~~~~~~~~~~i~v~v~~~~~~~~-----------~l~~~e~~~~~~yp~~kld~v~~P~~~~~~men~Gli~~~e~~ll   70 (119)
                      |-|+..+...+++|..||.|...+           .++|+|+.++..||+.-+.+|.+|.-....+....+.++.-+ +|
T Consensus       251 G~F~~~~~P~~~~i~~f~LP~~~~~v~nt~~~l~k~iefye~~ls~rYPF~~~k~VFvd~~~~~i~~~asl~I~st~-lL  329 (1180)
T KOG1932|consen  251 GPFKSYVEPSMIDITHFCLPGLEPLVKNTTVYLHKAIEFYEEELSSRYPFSCYKTVFVDEAAVEISSYASLSIFSTS-LL  329 (1180)
T ss_pred             ccccccCCCccCcceeEecCcchHHhhhHHHHHHHHHHHHHHHhccCCCcceeeEEEecCCcceeeecceeeeeecc-cc
Confidence            445556667799999999997654           457999999988999999999999777667777767666665 57


Q ss_pred             ccCCCCccccchhhhhhHhhhhhHhhhcCCCCCC-------ChhHHHHHhhhhhc
Q psy7253          71 YDEQETSASGHNWVAVVVAHELAPIRHNAKVAKP-------ANGKTTFVYLFDFK  118 (119)
Q Consensus        71 ~~~~~~~~~~~~~~~~~iaHEiaHqWfGnlVt~~-------~EG~a~y~~~~~~~  118 (119)
                      |+...  ..+.....+.+|-.+|-||||-.+|+.       -+|+|.|+..++.|
T Consensus       330 y~~~i--IDq~~~tr~~La~aLA~Q~fg~yIsp~~wsD~Wl~~GiagYl~~l~~k  382 (1180)
T KOG1932|consen  330 YSKNI--IDQTFLTRRKLAWALASQWFGVYISPVDWSDFWLLKGIAGYLTGLFVK  382 (1180)
T ss_pred             chHhh--hhHHHHHHHHHHHHHHHhhhEEEeeccchhhhHHHHhHHHHHHHHHHH
Confidence            76542  334455677899999999999999999       89999999988765

>PF13485 Peptidase_MA_2: Peptidase MA superfamily

Probab=98.26  E-value=6.7e-07  Score=59.16  Aligned_cols=34  Identities=26%  Similarity=0.393  Sum_probs=28.8

Q ss_pred             chhhhhhHhhhhhHhhhcCCCCC---C----ChhHHHHHhh
Q psy7253          81 HNWVAVVVAHELAPIRHNAKVAK---P----ANGKTTFVYL  114 (119)
Q Consensus        81 ~~~~~~~iaHEiaHqWfGnlVt~---~----~EG~a~y~~~  114 (119)
                      ......+++||++|+|+++.++.   .    +||+|+|++.
T Consensus        22 ~~~~~~~l~HE~~H~~~~~~~~~~~~~~~W~~EG~A~y~~~   62 (128)
T PF13485_consen   22 EDWLDRVLAHELAHQWFGNYFGGDDNAPRWFNEGLAEYVEG   62 (128)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCccCchHHHHHHHHHHhc
Confidence            34556899999999999999972   2    9999999985

>COG3975 Predicted protease with the C-terminal PDZ domain [General function prediction only]

Probab=96.21  E-value=0.027  Score=47.06  Aligned_cols=108  Identities=8%  Similarity=-0.020  Sum_probs=64.9

Q ss_pred             EEeeCCCCeEEEEEEcCC--CCCc--------hhHHHHhhCCCCCCCccCEEE-eCCCCCccccccccceeeccceeccC
Q psy7253           5 HVSDREPLIKVSVVGSAK--DVNS--------VPFLDSWARPAVRDCLDDLIA-IPDFGTGAMENWGLITYRETSILYDE   73 (119)
Q Consensus         5 ~~~~~~~~i~v~v~~~~~--~~~~--------l~~~e~~~~~~yp~~kld~v~-~P~~~~~~men~Gli~~~e~~ll~~~   73 (119)
                      +.+.+..+..+.++..-.  +.+.        ++.-.+.||. -|++|+.+++ +-+-..||||+---........-+. 
T Consensus       162 ~~e~~g~ph~~~~~g~~p~~d~~~~~~~~k~ii~~~~~vFg~-~~~~~Y~Fl~~~s~q~~GGlEH~~St~l~~~r~~~~-  239 (558)
T COG3975         162 DFEVTGAPHTIALRGELPNFDKERLASDTKKIIEAEIKVFGS-APFDKYVFLLHLSDQIYGGLEHRRSTALIYDRFGFT-  239 (558)
T ss_pred             eeeccCCceeEEEeeccccccHHHHHHHHHHHHHHHHHHhcC-CCccceEEEEEecCCCCCCceecccccccccccccc-
Confidence            334455555566665531  2222        2233457775 8889998876 4555567899753333332221111 


Q ss_pred             CCCccccchhhhhhHhhhhhHhhhcCCCCCC------------------ChhHHHHHhhhhh
Q psy7253          74 QETSASGHNWVAVVVAHELAPIRHNAKVAKP------------------ANGKTTFVYLFDF  117 (119)
Q Consensus        74 ~~~~~~~~~~~~~~iaHEiaHqWfGnlVt~~------------------~EG~a~y~~~~~~  117 (119)
                         +....+....+++||..|-|-+--+.|+                  .|||+.|...+.-
T Consensus       240 ---~~~ky~~~l~llsHEyfH~WNvKrIrpa~l~p~~~d~en~t~~lW~~EG~T~Yy~~ll~  298 (558)
T COG3975         240 ---DQDKYQDLLGLLSHEYFHAWNVKRIRPAALEPFNLDKENYTPLLWFSEGFTSYYDRLLA  298 (558)
T ss_pred             ---chhHHHHHHHHHHHHHHHhccceeccccccCCccccccCCCcceeeecCchHHHHHHHH
Confidence               1111345578999999999988666555                  8999999887643

>PF10026 DUF2268: Predicted Zn-dependent protease (DUF2268); InterPro: IPR018728 This domain, found in various hypothetical bacterial proteins, as well as predicted zinc dependent proteases, has no known function

Probab=95.08  E-value=0.064  Score=39.16  Aligned_cols=77  Identities=9%  Similarity=-0.039  Sum_probs=45.1

Q ss_pred             CCCCccCEEEeCCCCCc--cccc---cccceeeccceec-cCCCCccccchhhhhhHhhhhhHhhh-cCCC------CCC
Q psy7253          38 VRDCLDDLIAIPDFGTG--AMEN---WGLITYRETSILY-DEQETSASGHNWVAVVVAHELAPIRH-NAKV------AKP  104 (119)
Q Consensus        38 yp~~kld~v~~P~~~~~--~men---~Gli~~~e~~ll~-~~~~~~~~~~~~~~~~iaHEiaHqWf-GnlV------t~~  104 (119)
                      +|.+.+++.++|.-+.+  .+++   .|-..+....+++ -+.   ......+..+||||+.|-+- ...-      |.-
T Consensus        16 ~~~~~i~v~i~p~~~~~~~~~~~~g~~g~~~~~~~i~l~~~~~---~~~~~~l~~~iaHE~hH~~r~~~~~~~~~~~TLl   92 (195)
T PF10026_consen   16 LPGPDIPVFIFPADPENPFLIPELGGKGGGAIPGYIFLFLLPN---DYSLEELPALIAHEYHHNCRYEQIGWDPEDTTLL   92 (195)
T ss_pred             cCCCCCCEEEEeccCCCcccccccCcccccCCCCEEEEEecCC---cccHHHHHHHHHHHHHHHHHHhccCCCCCCCCHH
Confidence            56668888777644333  2222   3344444443333 222   22345788999999999853 3332      111


Q ss_pred             ----ChhHHHHHhhhhh
Q psy7253         105 ----ANGKTTFVYLFDF  117 (119)
Q Consensus       105 ----~EG~a~y~~~~~~  117 (119)
                          .||+|.+++...+
T Consensus        93 d~~I~EGlAe~f~~~~~  109 (195)
T PF10026_consen   93 DSLIMEGLAEYFAEELY  109 (195)
T ss_pred             HHHHHhhHHHHHHHHHc
Confidence                9999999987654

>COG4324 Predicted aminopeptidase [General function prediction only]

Probab=93.85  E-value=0.031  Score=43.48  Aligned_cols=34  Identities=21%  Similarity=0.163  Sum_probs=26.4

Q ss_pred             hhhhhhHhhhhhHhhhcCCCCCC-ChhHHHHHhhh
Q psy7253          82 NWVAVVVAHELAPIRHNAKVAKP-ANGKTTFVYLF  115 (119)
Q Consensus        82 ~~~~~~iaHEiaHqWfGnlVt~~-~EG~a~y~~~~  115 (119)
                      ..++++|-||+|||=|.----.. ||.|||+.|..
T Consensus       195 ~~lA~LIFHELAHQk~Y~~~DtAFNEsFAtaVEt~  229 (376)
T COG4324         195 TYLASLIFHELAHQKIYVNNDTAFNESFATAVETS  229 (376)
T ss_pred             HHHHHHHHHHHhhheEeecCcchHhHHHHHHHHHH
Confidence            46899999999999776322222 99999999864

>PF10023 DUF2265: Predicted aminopeptidase (DUF2265); InterPro: IPR014553 This group represents a predicted aminopeptidase

Probab=93.40  E-value=0.043  Score=43.60  Aligned_cols=35  Identities=26%  Similarity=0.126  Sum_probs=25.6

Q ss_pred             hhhhhhHhhhhhHhhhcCCCCCC-ChhHHHHHhhhh
Q psy7253          82 NWVAVVVAHELAPIRHNAKVAKP-ANGKTTFVYLFD  116 (119)
Q Consensus        82 ~~~~~~iaHEiaHqWfGnlVt~~-~EG~a~y~~~~~  116 (119)
                      ...+.+|-||+|||=+.--=... ||+|||++|..-
T Consensus       163 ~~LA~LIfHELaHq~~Yv~~dt~FNEsfAtfVe~~G  198 (337)
T PF10023_consen  163 GELARLIFHELAHQTLYVKGDTAFNESFATFVEREG  198 (337)
T ss_pred             hHHHHHHHHHHhhceeecCCCchhhHHHHHHHHHHH
Confidence            35789999999999544222222 999999998653

>PF12315 DUF3633: Protein of unknown function (DUF3633); InterPro: IPR022087 This domain family is found in bacteria and eukaryotes, and is approximately 210 amino acids in length

Probab=91.79  E-value=0.17  Score=37.79  Aligned_cols=36  Identities=14%  Similarity=0.191  Sum_probs=28.0

Q ss_pred             hhhhHhhhhhHhhhcC----CCCCC-ChhHHHHHhhhhhcC
Q psy7253          84 VAVVVAHELAPIRHNA----KVAKP-ANGKTTFVYLFDFKR  119 (119)
Q Consensus        84 ~~~~iaHEiaHqWfGn----lVt~~-~EG~a~y~~~~~~~~  119 (119)
                      ...++|||+-|-|.--    ..++. -||+|+.++++|++|
T Consensus        93 ~gsiLAHE~mHa~Lrl~g~~~L~~~vEEGiCqvla~~wL~~  133 (212)
T PF12315_consen   93 TGSILAHELMHAWLRLNGFPNLSPEVEEGICQVLAYLWLES  133 (212)
T ss_pred             HhhHHHHHHHHHHhcccCCCCCChHHHHHHHHHHHHHHHhh
Confidence            4679999999999731    11122 899999999999985

The family is found in association with PF00412 from PFAM.

>smart00731 SprT SprT homologues

Probab=91.01  E-value=0.077  Score=36.96  Aligned_cols=61  Identities=10%  Similarity=0.054  Sum_probs=32.9

Q ss_pred             HhhCCCCCCCccCEEEeCCCCCccccccccceeeccceeccCCCCccccchhhhhhHhhhhhHhhhc
Q psy7253          32 SWARPAVRDCLDDLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELAPIRHN   98 (119)
Q Consensus        32 ~~~~~~yp~~kld~v~~P~~~~~~men~Gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHEiaHqWfG   98 (119)
                      .+|+.++|.+   .|..   +.-..-.+|.-..+...|-+++..........+..+|.|||||.+..
T Consensus        13 ~~F~~~l~~~---~i~w---~~r~~~~~G~~~~~~~~I~ln~~l~~~~~~~~l~~~l~HEm~H~~~~   73 (146)
T smart00731       13 RVFGRKLPHP---KVVW---NKRLRKTGGRCLLKSAEIRLNPKLLTENGRDRLRETLLHELCHAALY   73 (146)
T ss_pred             HHHCCCCCCC---EEEE---ehhhhhhhHHhhcCCCEEEeCHHHHhhccHHHHHhhHHHHHHHHHHH
Confidence            6888777755   2221   11111224444433444444443322222345678999999999986

Predicted to have roles in transcription elongation. Contains a conserved HExxH motif, indicating a metalloprotease function.

>PF06114 DUF955: Domain of unknown function (DUF955); InterPro: IPR010359 This is a family of bacterial and viral proteins with undetermined function

Probab=88.41  E-value=0.41  Score=30.71  Aligned_cols=32  Identities=19%  Similarity=0.169  Sum_probs=20.7

Q ss_pred             ccceeccCCCCccccchhhhhhHhhhhhHhhhcCCC
Q psy7253          66 ETSILYDEQETSASGHNWVAVVVAHELAPIRHNAKV  101 (119)
Q Consensus        66 e~~ll~~~~~~~~~~~~~~~~~iaHEiaHqWfGnlV  101 (119)
                      ...+++++..+    ......+++||++|.+++.--
T Consensus        28 ~~~I~in~~~~----~~~~~f~laHELgH~~~~~~~   59 (122)
T PF06114_consen   28 NPIIFINSNLS----PERQRFTLAHELGHILLHHGD   59 (122)
T ss_dssp             TTEEEEESSS-----HHHHHHHHHHHHHHHHHHH-H
T ss_pred             CCEEEECCCCC----HHHHHHHHHHHHHHHHhhhcc
Confidence            45555665522    233467999999999998655

A conserved H-E-X-X-H motif is suggestive of a catalytic active site and shows similarity to IPR001915 from INTERPRO.; PDB: 3DTE_A 3DTK_A 3DTI_A.

>PRK04860 hypothetical protein; Provisional

Probab=88.33  E-value=0.42  Score=34.19  Aligned_cols=63  Identities=13%  Similarity=0.066  Sum_probs=35.1

Q ss_pred             hhHHHHhhCCCCCCCccCEEEeCCCCCcccc--ccccceeeccceeccCCCCccccchhhhhhHhhhhhHhhhc
Q psy7253          27 VPFLDSWARPAVRDCLDDLIAIPDFGTGAME--NWGLITYRETSILYDEQETSASGHNWVAVVVAHELAPIRHN   98 (119)
Q Consensus        27 l~~~e~~~~~~yp~~kld~v~~P~~~~~~me--n~Gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHEiaHqWfG   98 (119)
                      ++..+++|+.+++-+...+=.  ....+|+.  ...-|-++...  +.+     .....+..+|+||+||-|--
T Consensus        13 ~~~a~~~f~~~f~~p~~~f~~--R~rtaG~~~l~~~~I~~Np~l--l~~-----~~~~~l~~~v~HEl~H~~~~   77 (160)
T PRK04860         13 LAQANLYFKRTFPEPKVSYTQ--RGTSAGTAWLQSNEIRLNPVL--LLE-----NQQAFIDEVVPHELAHLLVY   77 (160)
T ss_pred             HHHHHHHhCCCCCCCEEEEee--cchhhcchhHhcCCeeeCHHH--Hhh-----CcHHHHHhHHHHHHHHHHHH
Confidence            456788999888875543322  12223332  22234444332  221     23456778999999998743

>PRK04351 hypothetical protein; Provisional

Probab=84.90  E-value=0.66  Score=32.77  Aligned_cols=16  Identities=19%  Similarity=0.233  Sum_probs=13.0

Q ss_pred             chhhhhhHhhhhhHhh
Q psy7253          81 HNWVAVVVAHELAPIR   96 (119)
Q Consensus        81 ~~~~~~~iaHEiaHqW   96 (119)
                      ...+..+|+||++|=.
T Consensus        58 ~~~l~~vv~HElcH~~   73 (149)
T PRK04351         58 LEELIGIIKHELCHYH   73 (149)
T ss_pred             HHHHHhhHHHHHHHHH
Confidence            4567899999999953

>COG4783 Putative Zn-dependent protease, contains TPR repeats [General function prediction only]

Probab=83.49  E-value=1.2  Score=37.03  Aligned_cols=53  Identities=19%  Similarity=0.192  Sum_probs=35.7

Q ss_pred             CCCCccCEEEeCCCCCccccccccceeeccceeccCCCCccccchhhhhhHhhhhhHh
Q psy7253          38 VRDCLDDLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELAPI   95 (119)
Q Consensus        38 yp~~kld~v~~P~~~~~~men~Gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHEiaHq   95 (119)
                      .|-.-++++.|-|=..++-..+|--++--+-++...+.     ...++.+||||++|-
T Consensus        89 ~~~~~f~f~lV~d~~iNAFA~~Gg~v~vntGLll~ae~-----esElagViAHEigHv  141 (484)
T COG4783          89 LVKTPFTFFLVNDDSINAFATPGGYVVVNTGLLLTAEN-----ESELAGVIAHEIGHV  141 (484)
T ss_pred             CCCCCeEEEEecCCccchhhcCCceEEEehHHHHhcCC-----HHHHHHHHHHHHHHH
Confidence            45566889998877777777766555544444443332     246889999999994

>PF10263 SprT-like: SprT-like family; InterPro: IPR006640 This is a family of uncharacterised bacterial proteins which includes Escherichia coli SprT (P39902 from SWISSPROT)

Probab=83.38  E-value=0.43  Score=33.02  Aligned_cols=20  Identities=15%  Similarity=0.046  Sum_probs=16.2

Q ss_pred             chhhhhhHhhhhhHhhhcCC
Q psy7253          81 HNWVAVVVAHELAPIRHNAK  100 (119)
Q Consensus        81 ~~~~~~~iaHEiaHqWfGnl  100 (119)
                      ...+..+|.|||+|.|..-.
T Consensus        57 ~~~~~~tL~HEm~H~~~~~~   76 (157)
T PF10263_consen   57 EEELIDTLLHEMAHAAAYVF   76 (157)
T ss_pred             HHHHHHHHHHHHHHHHhhhc
Confidence            45678899999999998543

SprT is described as a regulator of bolA gene in stationary phase []. The majority of members contain the metallopeptidase zinc binding signature which has a HExxH motif, however there is no evidence for them being metallopeptidases.

>PF04450 BSP: Peptidase of plants and bacteria; InterPro: IPR007541 These basic secretory proteins (BSPs) are believed to be part of the plants defence mechanism against pathogens []

Probab=82.90  E-value=1.5  Score=32.56  Aligned_cols=36  Identities=17%  Similarity=0.104  Sum_probs=27.1

Q ss_pred             cchhhhhhHhhhhhHhhhcCCCC--CC--ChhHHHHHhhh
Q psy7253          80 GHNWVAVVVAHELAPIRHNAKVA--KP--ANGKTTFVYLF  115 (119)
Q Consensus        80 ~~~~~~~~iaHEiaHqWfGnlVt--~~--~EG~a~y~~~~  115 (119)
                      .+..+..++.||++|-|=.+--.  |.  -||+|.|+-..
T Consensus        92 ~~~Ei~Gvl~HE~~H~~Q~~~~~~~P~~liEGIADyVRl~  131 (205)
T PF04450_consen   92 VRDEIIGVLYHEMVHCWQWDGRGTAPGGLIEGIADYVRLK  131 (205)
T ss_pred             hHHHHHHHHHHHHHHHhhcCCCCCCChhheecHHHHHHHH
Confidence            34678899999999977655433  22  99999998654

>PF12725 DUF3810: Protein of unknown function (DUF3810); InterPro: IPR024294 This family of bacterial proteins is functionally uncharacterised

Probab=81.92  E-value=0.66  Score=36.54  Aligned_cols=29  Identities=17%  Similarity=0.287  Sum_probs=21.0

Q ss_pred             hhhhhHhhhhhHhhhcCCCCCCChhHHHHHhhhh
Q psy7253          83 WVAVVVAHELAPIRHNAKVAKPANGKTTFVYLFD  116 (119)
Q Consensus        83 ~~~~~iaHEiaHqWfGnlVt~~~EG~a~y~~~~~  116 (119)
                      ..-.++|||+|||=     .-.+|.=|+|+++++
T Consensus       195 ~~P~T~~HElAHq~-----G~a~E~EANFiayLa  223 (318)
T PF12725_consen  195 SLPFTICHELAHQL-----GFASEDEANFIAYLA  223 (318)
T ss_pred             cccHHHHHHHHHHh-----CCCCHHHHHHHHHHH
Confidence            34579999999992     233777777777765

Proteins in this family are typically between 333 and 377 amino acids in length and contain a conserved HEXXH sequence motif that is characteristic of metallopeptidases. This family may therefore belong to an as yet uncharacterised family of peptidase enzymes.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	119
4e36_A	967	Crystal Structure Of The Human Endoplasmic Reticulu		1e-15
3se6_A	967	Crystal Structure Of The Human Endoplasmic Reticulu		1e-15
4fke_A	909	Crystal Structure Of Porcine Aminopeptidase-N Lengt		9e-13
4h5h_A	908	Crystal Structure Of Porcine Aminopeptidase-N Compl		9e-13
4f5c_A	959	Crystal Structure Of The Spike Receptor Binding Dom		9e-13
3qnf_A	954	Crystal Structure Of The Open State Of Human Endopl		1e-12
2yd0_A	897	Crystal Structure Of The Soluble Domain Of Human En		1e-12
3mdj_A	921	Er Aminopeptidase, Erap1, Bound To The Zinc Aminope		2e-12
4hol_A	908	Crystal Structure Of Porcine Aminopeptidase-N Compl		2e-12
4fyq_A	903	Human Aminopeptidase N (Cd13) Length = 903		5e-12
3q7j_A	780	Engineered Thermoplasma Acidophilum F3 Factor Mimic		4e-07
1z1w_A	780	Crystal Structures Of The Tricorn Interacting Facor		1e-06

>pdb|4E36|A Chain A, Crystal Structure Of The Human Endoplasmic Reticulum Aminopeptidase 2 Variant N392k Length = 967

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 36/50 (72%), Positives = 41/50 (82%)
Query: 44  DLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELA 93
           DLIAIPDF  GAMENWGLITYRETS+L+D + +SAS   WV  V+AHELA
Sbjct: 324 DLIAIPDFAPGAMENWGLITYRETSLLFDPKTSSASDKLWVTRVIAHELA 373

>pdb|3SE6|A Chain A, Crystal Structure Of The Human Endoplasmic Reticulum Aminopeptidase 2 Length = 967

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 36/50 (72%), Positives = 41/50 (82%)
Query: 44  DLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELA 93
           DLIAIPDF  GAMENWGLITYRETS+L+D + +SAS   WV  V+AHELA
Sbjct: 324 DLIAIPDFAPGAMENWGLITYRETSLLFDPKTSSASDKLWVTRVIAHELA 373

>pdb|4FKE|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Length = 909

Iteration: 1
 Score = 68.6 bits (166), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 44  DLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELA 93
           D IA+PDF  GAMENWGL+TYRE ++L+D Q +S S    V  V+AHELA
Sbjct: 276 DQIALPDFNAGAMENWGLVTYRENALLFDPQSSSISNKERVVTVIAHELA 325

>pdb|4H5H|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed With Cleaved Poly-Alanine Length = 908

Iteration: 1
 Score = 68.6 bits (166), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 44  DLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELA 93
           D IA+PDF  GAMENWGL+TYRE ++L+D Q +S S    V  V+AHELA
Sbjct: 275 DQIALPDFNAGAMENWGLVTYRENALLFDPQSSSISNKERVVTVIAHELA 324

>pdb|4F5C|A Chain A, Crystal Structure Of The Spike Receptor Binding Domain Of A Porcine Respiratory Coronavirus In Complex With The Pig Aminopeptidase N Ectodomain Length = 959

Iteration: 1
 Score = 68.6 bits (166), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 44  DLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELA 93
           D IA+PDF  GAMENWGL+TYRE ++L+D Q +S S    V  V+AHELA
Sbjct: 319 DQIALPDFNAGAMENWGLVTYRENALLFDPQSSSISNKERVVTVIAHELA 368

>pdb|3QNF|A Chain A, Crystal Structure Of The Open State Of Human Endoplasmic Reticulum Aminopeptidase 1 Erap1 Length = 954

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 30/51 (58%), Positives = 40/51 (78%)
Query: 43  DDLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELA 93
            DL AIPDF +GAMENWGL TYRE+++L+D +++SAS    + + VAHELA
Sbjct: 312 QDLAAIPDFQSGAMENWGLTTYRESALLFDAEKSSASSKLGITMTVAHELA 362

>pdb|2YD0|A Chain A, Crystal Structure Of The Soluble Domain Of Human Endoplasmic Reticulum Aminopeptidase 1 Erap1 Length = 897

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 30/51 (58%), Positives = 40/51 (78%)
Query: 43  DDLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELA 93
            DL AIPDF +GAMENWGL TYRE+++L+D +++SAS    + + VAHELA
Sbjct: 261 QDLAAIPDFQSGAMENWGLTTYRESALLFDAEKSSASSKLGITMTVAHELA 311

>pdb|3MDJ|A Chain A, Er Aminopeptidase, Erap1, Bound To The Zinc Aminopeptidase Inhibitor, Bestatin Length = 921

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 30/51 (58%), Positives = 40/51 (78%)
Query: 43  DDLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELA 93
            DL AIPDF +GAMENWGL TYRE+++L+D +++SAS    + + VAHELA
Sbjct: 270 QDLAAIPDFQSGAMENWGLTTYRESALLFDAEKSSASSKLDITMTVAHELA 320

>pdb|4HOL|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed With Poly- Alanine Length = 908

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 29/50 (58%), Positives = 37/50 (74%)
Query: 44  DLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELA 93
           D IA+PDF  GAMENWGL+TYRE ++L+D Q +S S    V  V+AH+LA
Sbjct: 275 DQIALPDFNAGAMENWGLVTYRENALLFDPQSSSISNKERVVTVIAHQLA 324

>pdb|4FYQ|A Chain A, Human Aminopeptidase N (Cd13) Length = 903

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 29/50 (58%), Positives = 36/50 (72%)
Query: 44  DLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELA 93
           D I +PDF  GAMENWGL+TYRE S+L+D   +S+S    V  V+AHELA
Sbjct: 278 DQIGLPDFNAGAMENWGLVTYRENSLLFDPLSSSSSNKERVVTVIAHELA 327

>pdb|3Q7J|A Chain A, Engineered Thermoplasma Acidophilum F3 Factor Mimics Human Aminopeptidase N (Apn) As A Target For Anticancer Drug Development Length = 780

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 34/50 (68%), Gaps = 3/50 (6%)
Query: 45  LIAIPDFGTGAMENWGLITYRETSILYDEQETSA-SGHNWVAVVVAHELA 93
           LI++P+FG GAMENWG IT+RE  I  D  E SA +     A V+AHE+A
Sbjct: 221 LISVPEFGAGAMENWGAITFRE--IYMDIAENSAVTVKRNSATVIAHEIA 268

>pdb|1Z1W|A Chain A, Crystal Structures Of The Tricorn Interacting Facor F3 From Thermoplasma Acidophilum, A Zinc Aminopeptidase In Three Different Conformations Length = 780

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 34/50 (68%), Gaps = 3/50 (6%)
Query: 45  LIAIPDFGTGAMENWGLITYRETSILYDEQETSA-SGHNWVAVVVAHELA 93
           LI++P+FG GAMENWG IT+RE  I  D  E SA +     A V+AHE+A
Sbjct: 221 LISVPEFGAGAMENWGAITFRE--IYMDIAENSAVTVKRNSANVIAHEIA 268

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	119
2xdt_A	897	Endoplasmic reticulum aminopeptidase 1; glycoprote	2e-26
3se6_A	967	Endoplasmic reticulum aminopeptidase 2; thermolysi	2e-26
1z5h_A	780	Tricorn protease interacting factor F3; zinc amino	4e-25
2xq0_A	632	LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: B	1e-17
3cia_A	605	Cold-active aminopeptidase; psychrohilic, hydrolas	1e-15
3ebh_A	889	PFA-M1, M1 family aminopeptidase; hydrolase, metal	2e-15
3b7s_A	616	Leukotriene A-4 hydrolase; transition state, analo	4e-15
2gtq_A	867	Aminopeptidase N; alanine aminopeptidase, M1 famil	4e-12
3b34_A	891	Aminopeptidase N; protease, hydrolase, thermolysin	1e-10

>3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} Length = 967

 Score =  101 bits (252), Expect = 2e-26
 Identities = 36/50 (72%), Positives = 41/50 (82%)

Query: 44  DLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELA 93
           DLIAIPDF  GAMENWGLITYRETS+L+D + +SAS   WV  V+AHELA
Sbjct: 324 DLIAIPDFAPGAMENWGLITYRETSLLFDPKTSSASDKLWVTRVIAHELA 373

>1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A* Length = 780

 Score = 97.4 bits (243), Expect = 4e-25
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 1/50 (2%)

Query: 44  DLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELA 93
            LI++P+FG GAMENWG IT+RE  +   E  ++ +     A V+AHE+A
Sbjct: 220 HLISVPEFGAGAMENWGAITFREIYMDIAE-NSAVTVKRNSANVIAHEIA 268

>2xq0_A LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: BES; 1.96A {Saccharomyces cerevisiae} PDB: 2xpz_A* 2xpy_A* Length = 632

 Score = 76.4 bits (188), Expect = 1e-17
 Identities = 13/52 (25%), Positives = 21/52 (40%), Gaps = 9/52 (17%)

Query: 42  LDDLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELA 93
            D L+ +  +  G ME+  +     T + +D              V+AHELA
Sbjct: 262 YDILVNVDSYPYGGMESPNMTFATPTLLAHDRSNID---------VIAHELA 304

>3cia_A Cold-active aminopeptidase; psychrohilic, hydrolase; 2.70A {Colwellia psychrerythraea} Length = 605

 Score = 70.2 bits (172), Expect = 1e-15
 Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 9/52 (17%)

Query: 42  LDDLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELA 93
            D L+  P F  G MEN  L     T +  D+          +  ++AHELA
Sbjct: 261 YDLLMLPPSFPFGGMENPRLSFITPTVVAGDKS---------LVNLIAHELA 303

>3ebh_A PFA-M1, M1 family aminopeptidase; hydrolase, metal-binding, metalloprotease, P hydrolase inhibitor; HET: BES; 1.65A {Plasmodium falciparum} PDB: 3ebg_A* 3ebi_A* 3q43_A* 3q44_A* 3t8v_A* Length = 889

 Score = 70.3 bits (172), Expect = 2e-15
 Identities = 17/51 (33%), Positives = 27/51 (52%)

Query: 44  DLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELAP 94
           +L+A+ DF  GAMEN GL  +   S+L  ++ +    +  +  VV HE   
Sbjct: 255 NLVAVSDFNVGAMENKGLNIFNANSLLASKKNSIDFSYARILTVVGHEYFH 305

>3b7s_A Leukotriene A-4 hydrolase; transition state, analogue peptide, hydrolysis, hydrolase, leukotriene biosynthesis, metal-binding, metalloprotease; 1.47A {Homo sapiens} SCOP: a.118.1.7 b.98.1.1 d.92.1.13 PDB: 3b7t_A 3b7r_L* 2r59_A* 3b7u_X* 3fun_A* 1hs6_A* 2vj8_A* 3fh7_A* 3fh8_A* 3fhe_A* 3fts_A* 3ftu_A* 3ftv_A* 3ftw_A* 3ftx_A* 3fty_A* 3ftz_A* 3fu0_A* 3fu3_A* 3fu5_A* ... Length = 616

 Score = 69.0 bits (169), Expect = 4e-15
 Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 10/51 (19%)

Query: 44  DLIAIP-DFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELA 93
           DL+ +P  F  G MEN  L     T +  D+          ++ V+AH+++
Sbjct: 263 DLLVLPPSFPYGGMENPCLTFVTPTLLAGDK---------SLSNVIAHQIS 304

>2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis} Length = 867

 Score = 60.7 bits (147), Expect = 4e-12
 Identities = 16/51 (31%), Positives = 25/51 (49%)

Query: 44  DLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELAP 94
            ++A+ DF  GAMEN GL  +    +L D +  + +    +  VV HE   
Sbjct: 247 MVVAVGDFNMGAMENKGLNIFNTKFVLADSRTATDTDFEGIESVVGHEYFH 297

>3b34_A Aminopeptidase N; protease, hydrolase, thermolysin, phenylal membrane, metal-binding, metalloprotease; HET: PHE; 1.30A {Escherichia coli K12} PDB: 2hpt_A* 3b2p_A* 2hpo_A* 3b2x_A* 3b37_A* 3b3b_A* 3ked_A* 3qjx_A 3puu_A 2dq6_A 2dqm_A* 2zxg_A* Length = 891

 Score = 56.1 bits (135), Expect = 1e-10
 Identities = 13/51 (25%), Positives = 22/51 (43%)

Query: 44  DLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELAP 94
            ++A+  F  GAMEN GL  +    +L      +   +  +  V+ HE   
Sbjct: 272 MIVAVDFFNMGAMENKGLNIFNSKYVLARTDTATDKDYLDIERVIGHEYFH 322

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	119
4fke_A	909	Aminopeptidase N; zinc aminopeptidase, hydrolase;	99.97
2xdt_A	897	Endoplasmic reticulum aminopeptidase 1; glycoprote	99.97
3se6_A	967	Endoplasmic reticulum aminopeptidase 2; thermolysi	99.97
3ebh_A	889	PFA-M1, M1 family aminopeptidase; hydrolase, metal	99.97
1z5h_A	780	Tricorn protease interacting factor F3; zinc amino	99.97
3b34_A	891	Aminopeptidase N; protease, hydrolase, thermolysin	99.96
2gtq_A	867	Aminopeptidase N; alanine aminopeptidase, M1 famil	99.96
3u9w_A	608	Leukotriene A-4 hydrolase; hydrolase-hydrolase inh	99.93
3cia_A	605	Cold-active aminopeptidase; psychrohilic, hydrolas	99.93
2xq0_A	632	LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: B	99.93
4fgm_A	597	Aminopeptidase N family protein; structural genomi	99.66

>4fke_A Aminopeptidase N; zinc aminopeptidase, hydrolase; HET: NAG; 1.85A {Sus scrofa} PDB: 4fkh_A* 4fkk_A* 4fkn_A* 4fkf_A* 4f5c_A* 4fyt_A* 4fyr_A* 4fys_A* 4fyq_A*

Probab=99.97  E-value=1.3e-33  Score=241.93  Aligned_cols=109  Identities=31%  Similarity=0.494  Sum_probs=100.3

Q ss_pred             CCCCeEEEEEEcCCCC-------------CchhHHHHhhCCCCCCCccCEEEeCCCCCccccccccceeeccceeccCCC
Q psy7253           9 REPLIKVSVVGSAKDV-------------NSVPFLDSWARPAVRDCLDDLIAIPDFGTGAMENWGLITYRETSILYDEQE   75 (119)
Q Consensus         9 ~~~~i~v~v~~~~~~~-------------~~l~~~e~~~~~~yp~~kld~v~~P~~~~~~men~Gli~~~e~~ll~~~~~   75 (119)
                      +.+|++|++|++|+..             +.+++++++++.|||++|+|+|++|+|+.|||||||+|+|+|+.+|++++.
T Consensus       228 ~~~g~~~~v~~~p~~~~~~~~~~al~~~~~~l~~~e~~~~~~Yp~~k~d~v~vpdf~~gaMEn~glit~~e~~ll~d~~~  307 (909)
T 4fke_A          228 AQNGVLIRIWARPNAIAEGHGMYALNVTGPILNFFANHYNTSYPLPKSDQIALPDFNAGAMENWGLVTYRENALLFDPQS  307 (909)
T ss_dssp             CTTSCEEEEEECHHHHHTTTTHHHHHHHHHHHHHHHHHTTSCCSSSEEEEEEETTCTTCEECCTTEEEEEHHHHCCCTTT
T ss_pred             cCCCcEEEEEEecchhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCcccEEEecCCCCcccccCcccccccceeecCccc
Confidence            5789999999998632             235789999999999999999999999999999999999999999999998


Q ss_pred             CccccchhhhhhHhhhhhHhhhcCCCCCC-------ChhHHHHHhhhhh
Q psy7253          76 TSASGHNWVAVVVAHELAPIRHNAKVAKP-------ANGKTTFVYLFDF  117 (119)
Q Consensus        76 ~~~~~~~~~~~~iaHEiaHqWfGnlVt~~-------~EG~a~y~~~~~~  117 (119)
                      ++...++.++.+||||+|||||||+||++       |||||+|+++++.
T Consensus       308 s~~~~~~~~~~viaHElAHqWFGnlVT~~~W~dlWLnEGFAty~e~~~~  356 (909)
T 4fke_A          308 SSISNKERVVTVIAHELAHQWFGNLVTLAWWNDLWLNEGFASYVEYLGA  356 (909)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTTBTTTEEESSGGGHHHHHHHHHHHHHHHH
T ss_pred             CChHHHHHHHHHHHHHHHhhhhcCeecccccCcceeehHHHHHHHHHHH
Confidence            88888999999999999999999999999       9999999998864

>3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} PDB: 4e36_A*

Probab=99.97  E-value=6.8e-33  Score=239.02  Aligned_cols=110  Identities=41%  Similarity=0.592  Sum_probs=100.9

Q ss_pred             CCCCeEEEEEEcCCCCC-----------chhHHHHhhCCCCCCCccCEEEeCCCCCccccccccceeeccceeccCCCCc
Q psy7253           9 REPLIKVSVVGSAKDVN-----------SVPFLDSWARPAVRDCLDDLIAIPDFGTGAMENWGLITYRETSILYDEQETS   77 (119)
Q Consensus         9 ~~~~i~v~v~~~~~~~~-----------~l~~~e~~~~~~yp~~kld~v~~P~~~~~~men~Gli~~~e~~ll~~~~~~~   77 (119)
                      +.+|+++++|++|+..+           .+++++++||.|||++|+|+|++|+|+.|||||||+|+|+|..+|+++..++
T Consensus       278 ~~~gv~v~v~~~p~~~~~~~~al~~~~~~l~~~e~~fg~~YP~~k~d~v~vPdf~~GaMEn~Glity~e~~ll~d~~~s~  357 (967)
T 3se6_A          278 TSSGVKVSIYASPDKRNQTHYALQASLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWGLITYRETSLLFDPKTSS  357 (967)
T ss_dssp             CTTCCEEEEEECGGGGGGGHHHHHHHHHHHHHHHHHHTCCCCSSEEEEEEESSCSSSEECCTTEEEEEGGGTCCCTTTCC
T ss_pred             cCCCcEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccEEEecCCCCcccccCCccccchhheecCcccCC
Confidence            47899999999997653           3578999999999999999999999999999999999999999999998777


Q ss_pred             cccchhhhhhHhhhhhHhhhcCCCCCC-------ChhHHHHHhhhhhc
Q psy7253          78 ASGHNWVAVVVAHELAPIRHNAKVAKP-------ANGKTTFVYLFDFK  118 (119)
Q Consensus        78 ~~~~~~~~~~iaHEiaHqWfGnlVt~~-------~EG~a~y~~~~~~~  118 (119)
                      ..+++.++.+||||+|||||||+||++       |||||+|+++++.+
T Consensus       358 ~~~k~~~~~vIaHElAHqWFGnlVT~~wW~dlWLnEGFAty~e~~~~~  405 (967)
T 3se6_A          358 ASDKLWVTRVIAHELAHQWFGNLVTMEWWNDIWLNEGFAKYMELIAVN  405 (967)
T ss_dssp             HHHHHHHHHHHHHHHGGGTBTTTEEESSGGGTHHHHHHHHHHHHHHHH
T ss_pred             HHhhHhHHHHHHHHHHHHHhcCccccCCCccccHHHHHHHHHHHHHHH
Confidence            778888999999999999999999999       99999999988653

>3ebh_A PFA-M1, M1 family aminopeptidase; hydrolase, metal-binding, metalloprotease, P hydrolase inhibitor; HET: BES; 1.65A {Plasmodium falciparum} PDB: 3ebg_A* 3ebi_A* 3q43_A* 3q44_A* 3t8v_A*

Probab=99.97  E-value=9.1e-32  Score=230.33  Aligned_cols=107  Identities=23%  Similarity=0.247  Sum_probs=96.1

Q ss_pred             CCeEEEEEEcCCCCC-----------chhHHHHhhCCCCCCCccCEEEeCCCCCccccccccceeeccceeccCCCCccc
Q psy7253          11 PLIKVSVVGSAKDVN-----------SVPFLDSWARPAVRDCLDDLIAIPDFGTGAMENWGLITYRETSILYDEQETSAS   79 (119)
Q Consensus        11 ~~i~v~v~~~~~~~~-----------~l~~~e~~~~~~yp~~kld~v~~P~~~~~~men~Gli~~~e~~ll~~~~~~~~~   79 (119)
                      +++++++|++|+..+           .++|++++||.+||++|+|+|++|+|+.|||||||+++|+|+.+|+++...+..
T Consensus       211 ~~v~l~vy~~p~~~~~~~~al~~~~~~l~~~e~~fG~pYP~~kyd~VavPdF~~GaMEN~GLvtf~e~~lL~~~~~~t~~  290 (889)
T 3ebh_A          211 KKVELYVFSEEKYVSKLQWALECLKKSMAFDEDYFGLEYDLSRLNLVAVSDFNVGAMENKGLNIFNANSLLASKKNSIDF  290 (889)
T ss_dssp             CEEEEEEEEEGGGGGGGHHHHHHHHHHHHHHHHHHCCCCCSSEEEEEEESCCSSSEECCTTEEEEEGGGTCCCTTTSCTH
T ss_pred             CceEEEEEeccCcHHHHHHHHHHHHHHHHHHHHHHCCCCCCCceEEEEeccccchhhcCCceeEecccccccCcccCcHH
Confidence            358999999998654           456899999999999999999999999999999999999999999888766666


Q ss_pred             cchhhhhhHhhhhhHhhhcCCCCCC-------ChhHHHHHhhhhh
Q psy7253          80 GHNWVAVVVAHELAPIRHNAKVAKP-------ANGKTTFVYLFDF  117 (119)
Q Consensus        80 ~~~~~~~~iaHEiaHqWfGnlVt~~-------~EG~a~y~~~~~~  117 (119)
                      +++.++.+||||+|||||||+||++       |||||+|++.++.
T Consensus       291 ~~~~i~~vIAHElAHQWFGNlVT~~~W~dlWLnEGFAtY~e~~~~  335 (889)
T 3ebh_A          291 SYARILTVVGHEYFHQYTGNRVTLRDWFQLTLKEGLTVHRENLFS  335 (889)
T ss_dssp             HHHHHHHHHHHHHHTTTBTTTBEESSGGGHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCeeeecccccceeeHHHHHHHHHHHH
Confidence            7788899999999999999999999       9999999987543

>1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A*

Probab=99.97  E-value=1.1e-31  Score=227.07  Aligned_cols=107  Identities=27%  Similarity=0.353  Sum_probs=95.9

Q ss_pred             CCeEEEEEEcCCCC---------CchhHHHHhhCCCCCCCccCEEEeCCCCCccccccccceeeccceeccCCCCccccc
Q psy7253          11 PLIKVSVVGSAKDV---------NSVPFLDSWARPAVRDCLDDLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGH   81 (119)
Q Consensus        11 ~~i~v~v~~~~~~~---------~~l~~~e~~~~~~yp~~kld~v~~P~~~~~~men~Gli~~~e~~ll~~~~~~~~~~~   81 (119)
                      +|+++++|++|+..         +.+++++++||.+||++|+|+|++|+|+.|||||||+++|+|+.++++ +.++..++
T Consensus       178 ~gv~~~v~~~~~~~~~~al~~~~~~l~~~e~~fg~~YP~~k~d~v~vpdf~~GaMEn~glit~~e~~ll~~-~~~~~~~~  256 (780)
T 1z5h_A          178 RDIDLILASLKDIRSKYPLDMARKSVEFYENYFGIPYALPKMHLISVPEFGAGAMENWGAITFREIYMDIA-ENSAVTVK  256 (780)
T ss_dssp             TTEEEEEEESSCCCCSHHHHHHHHHHHHHHHHHSSCCSSSEEEEEEETTCTTCEECCTTEEEEEHHHHSCC-TTSCHHHH
T ss_pred             CCeeEEEEEccchhHHHHHHHHHHHHHHHHHHhCCCCCCccCCEEEcCCCCCCcccccCeeEeecceEeec-CCCCHHHH
Confidence            49999999998711         235789999999999999999999999999999999999999999988 55666778


Q ss_pred             hhhhhhHhhhhhHhhhcCCCCCC-------ChhHHHHHhhhhhc
Q psy7253          82 NWVAVVVAHELAPIRHNAKVAKP-------ANGKTTFVYLFDFK  118 (119)
Q Consensus        82 ~~~~~~iaHEiaHqWfGnlVt~~-------~EG~a~y~~~~~~~  118 (119)
                      +.++.+||||+|||||||+|||+       |||||+|++++..+
T Consensus       257 ~~~~~viaHElaHqWfGnlVT~~~W~dlWLnEGfA~y~~~~~~~  300 (780)
T 1z5h_A          257 RNSANVIAHEIAHQWFGDLVTMKWWNDLWLNESFATFMSYKTMD  300 (780)
T ss_dssp             HHHHHHHHHHHHHTTBTTTEEESSGGGHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCccccCCcccccccHHHHHHHHHHHHH
Confidence            88999999999999999999999       99999999998654

>3b34_A Aminopeptidase N; protease, hydrolase, thermolysin, phenylal membrane, metal-binding, metalloprotease; HET: PHE; 1.30A {Escherichia coli K12} PDB: 2hpt_A* 3b2p_A* 2hpo_A* 3b2x_A* 3b37_A* 3b3b_A* 3ked_A* 3qjx_A 3puu_A 2dq6_A 2dqm_A* 2zxg_A*

Probab=99.96  E-value=6.7e-31  Score=225.12  Aligned_cols=108  Identities=17%  Similarity=0.117  Sum_probs=96.5

Q ss_pred             CCCeEEEEEEcCCCCC-----------chhHHHHhhCCCCCCCccCEEEeCCCCCccccccccceeeccceeccCCCCcc
Q psy7253          10 EPLIKVSVVGSAKDVN-----------SVPFLDSWARPAVRDCLDDLIAIPDFGTGAMENWGLITYRETSILYDEQETSA   78 (119)
Q Consensus        10 ~~~i~v~v~~~~~~~~-----------~l~~~e~~~~~~yp~~kld~v~~P~~~~~~men~Gli~~~e~~ll~~~~~~~~   78 (119)
                      .++++|++|++|+..+           .++|++++||.+||++|+|+|++|+|+.|||||||+++|+|+.+|+++...+.
T Consensus       227 g~~v~l~vy~~p~~~~~~~~al~~~~~~l~~~e~~fG~pYP~~k~diVavPdf~~GaMEn~GLitf~e~~lL~~~~~~t~  306 (891)
T 3b34_A          227 GREVALELYVDRGNLDRAPWAMTSLKNSMKWDEERFGLEYDLDIYMIVAVDFFNMGAMENKGLNIFNSKYVLARTDTATD  306 (891)
T ss_dssp             CCEEEEEEEECTTCGGGCHHHHHHHHHHHHHHHHHHCCCCCSSEEEEEEESCCSSSEECCTTEEEEEGGGTCCCTTTCCH
T ss_pred             CCceEEEEEeccCcHHHHHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEcCCCCcCccccCceeEecccccccCcccCcH
Confidence            3458999999998654           45789999999999999999999999999999999999999999998876666


Q ss_pred             ccchhhhhhHhhhhhHhhhcCCCCCC-------ChhHHHHHhhhhh
Q psy7253          79 SGHNWVAVVVAHELAPIRHNAKVAKP-------ANGKTTFVYLFDF  117 (119)
Q Consensus        79 ~~~~~~~~~iaHEiaHqWfGnlVt~~-------~EG~a~y~~~~~~  117 (119)
                      .++..+..+||||+|||||||+||++       |||||+|++..+.
T Consensus       307 ~~~~~i~~vIAHElAHqWFGNlVT~~~W~dlWLnEGFAtY~e~~~~  352 (891)
T 3b34_A          307 KDYLDIERVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFS  352 (891)
T ss_dssp             HHHHHHHHHHHHHHHTTTBTTTEEESSGGGHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCcccchhhceehHHHHHHHHHHHH
Confidence            66788899999999999999999999       9999999986543

>2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis}

Probab=99.96  E-value=7.4e-31  Score=224.37  Aligned_cols=108  Identities=20%  Similarity=0.190  Sum_probs=96.4

Q ss_pred             CCCeEEEEEEcCCCCC-----------chhHHHHhhCCCCCCCccCEEEeCCCCCccccccccceeeccceeccCCCCcc
Q psy7253          10 EPLIKVSVVGSAKDVN-----------SVPFLDSWARPAVRDCLDDLIAIPDFGTGAMENWGLITYRETSILYDEQETSA   78 (119)
Q Consensus        10 ~~~i~v~v~~~~~~~~-----------~l~~~e~~~~~~yp~~kld~v~~P~~~~~~men~Gli~~~e~~ll~~~~~~~~   78 (119)
                      .++++|++|++|+..+           .++|++++||.+||++|+|+|++|+|+.|||||||+++|+|+.+++++...+.
T Consensus       202 g~~v~l~vy~~p~~~~~~~~al~~~~~~l~~~e~~fG~pYP~~k~d~Vavpdf~~GaMEn~glitf~e~~ll~~~~~~~~  281 (867)
T 2gtq_A          202 GRNVKIEFYTTEADKPKVGFAVESLKNAMKWDETRFGLEYDLDIFMVVAVGDFNMGAMENKGLNIFNTKFVLADSRTATD  281 (867)
T ss_dssp             SCEEEEEEEECTTTGGGCHHHHHHHHHHHHHHHHHHCCCCCSSEEEEEEESSCSSSEECCTTEEEEEGGGTCCCTTTCCH
T ss_pred             CCceEEEEEeccccHHHHHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEcCCCCccccccCCceeecccccccCcccCcH
Confidence            3458999999998653           35789999999999999999999999999999999999999999988876666


Q ss_pred             ccchhhhhhHhhhhhHhhhcCCCCCC-------ChhHHHHHhhhhh
Q psy7253          79 SGHNWVAVVVAHELAPIRHNAKVAKP-------ANGKTTFVYLFDF  117 (119)
Q Consensus        79 ~~~~~~~~~iaHEiaHqWfGnlVt~~-------~EG~a~y~~~~~~  117 (119)
                      .+++.++.+||||+|||||||+||++       |||||+|++..+.
T Consensus       282 ~~~~~i~~vIaHElAHqWfGnlVT~~~W~dlWLnEGfAty~e~~~~  327 (867)
T 2gtq_A          282 TDFEGIESVVGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFS  327 (867)
T ss_dssp             HHHHHHHHHHHHHHHTTTBTTTBEESSGGGHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCcEEEecccccccchHHHHHHHHHHHH
Confidence            67788899999999999999999999       9999999986553

>3u9w_A Leukotriene A-4 hydrolase; hydrolase-hydrolase inhibitor complex; HET: 28P; 1.25A {Homo sapiens} PDB: 3cho_A* 3chp_A* 3chq_A* 3chr_A* 3chs_A* 3fun_A* 1hs6_A* 2vj8_A* 3fh7_A* 3fh8_A* 3fhe_A* 3fts_A* 3ftu_A* 3ftv_A* 3ftw_A* 3ftx_A* 3fty_A* 3ftz_A* 3fu0_A* 3fu3_A* ...

Probab=99.93  E-value=1.3e-27  Score=197.49  Aligned_cols=98  Identities=20%  Similarity=0.183  Sum_probs=83.5

Q ss_pred             CCCeEEEEEEcCCCC-----------CchhHHHHhhCCCCCCCccCEEEe-CCCCCccccccccceeeccceeccCCCCc
Q psy7253          10 EPLIKVSVVGSAKDV-----------NSVPFLDSWARPAVRDCLDDLIAI-PDFGTGAMENWGLITYRETSILYDEQETS   77 (119)
Q Consensus        10 ~~~i~v~v~~~~~~~-----------~~l~~~e~~~~~~yp~~kld~v~~-P~~~~~~men~Gli~~~e~~ll~~~~~~~   77 (119)
                      ..|+++++|++|+..           +.++++++++| +||++++|+|++ |+|+.|||||||+++++++.++.+.    
T Consensus       211 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~l~~~e~~~g-~Yp~~~~~~vv~~p~f~~GgMEn~gl~~~~~~~l~~~~----  285 (608)
T 3u9w_A          211 QIGPRTLVWSEKEQVEKSAYEFSETESMLKIAEDLGG-PYVWGQYDLLVLPPSFPYGGMENPCLTFVTPTLLAGDK----  285 (608)
T ss_dssp             EEETTEEEEECHHHHHHHHHHTTTHHHHHHHHHHHHC-CCCSSCCEEEECCTTCSSSEECCTTEEEECGGGCCSSS----
T ss_pred             ecCCceEEEeChhhHHHHHHHHHHHHHHHHhHHhcCC-CCCchhhceeeecccccchhhhcCcceeeeeeeecccc----
Confidence            346778899998643           34678999998 699999999887 7999999999999999999765432    


Q ss_pred             cccchhhhhhHhhhhhHhhhcCCCCCC-------ChhHHHHHhhhhh
Q psy7253          78 ASGHNWVAVVVAHELAPIRHNAKVAKP-------ANGKTTFVYLFDF  117 (119)
Q Consensus        78 ~~~~~~~~~~iaHEiaHqWfGnlVt~~-------~EG~a~y~~~~~~  117 (119)
                           .++.+||||+|||||||+||++       |||||+|+++++.
T Consensus       286 -----~~~~viaHElAHqWfGnlVT~~~W~d~WLnEGfAty~e~~~~  327 (608)
T 3u9w_A          286 -----SLSNVIAHEISHSWTGNLVTNKTWDHFWLNEGHTVYLERHIC  327 (608)
T ss_dssp             -----TTTHHHHHHHHTTTBTTTEEESSGGGHHHHHHHHHHHHHHHH
T ss_pred             -----hhHHHHHHHhhhhhhcCcCccccccchhHHHhHHHHHHHHHH
Confidence                 3567999999999999999999       9999999998764

>3cia_A Cold-active aminopeptidase; psychrohilic, hydrolase; 2.70A {Colwellia psychrerythraea}

Probab=99.93  E-value=5.6e-27  Score=193.68  Aligned_cols=98  Identities=19%  Similarity=0.200  Sum_probs=82.6

Q ss_pred             CCeEEEEEEcCCCC-----------CchhHHHHhhCCCCCCCccCEEEeC-CCCCccccccccceeeccceeccCCCCcc
Q psy7253          11 PLIKVSVVGSAKDV-----------NSVPFLDSWARPAVRDCLDDLIAIP-DFGTGAMENWGLITYRETSILYDEQETSA   78 (119)
Q Consensus        11 ~~i~v~v~~~~~~~-----------~~l~~~e~~~~~~yp~~kld~v~~P-~~~~~~men~Gli~~~e~~ll~~~~~~~~   78 (119)
                      .|+++++|++|+..           +.++++++++| +||++|+|+|++| +|+.|||||||+ +|.+..++.+.     
T Consensus       219 ~g~~~~v~~~p~~~~~~~~~~~~~~~~l~~~e~~fG-~YP~~k~d~v~~p~~f~~GgMEn~gl-tf~~~~ll~~~-----  291 (605)
T 3cia_A          219 MSHQTGIYAESYILDAAVAEFDDTQAMIDKAEQMYG-KYRWGRYDLLMLPPSFPFGGMENPRL-SFITPTVVAGD-----  291 (605)
T ss_dssp             SSSSEEEEECSTTHHHHHHHSTTHHHHHHHHHHHHC-CCTTSCEEEEECCTTCSSSEECCTTE-EEECGGGCCSS-----
T ss_pred             CCCeEEEEeccChHHHHHHHHHHHHHHHHHHHHHhC-CCCCccccEEEECCccCCCcccCCcE-EEecchhccCc-----
Confidence            46789999999754           34678999999 8999999999995 999999999998 56666655432     


Q ss_pred             ccchhhhhhHhhhhhHhhhcCCCCCC-------ChhHHHHHhhhhhc
Q psy7253          79 SGHNWVAVVVAHELAPIRHNAKVAKP-------ANGKTTFVYLFDFK  118 (119)
Q Consensus        79 ~~~~~~~~~iaHEiaHqWfGnlVt~~-------~EG~a~y~~~~~~~  118 (119)
                         ...+.+||||+|||||||+||++       |||||+|+++++.+
T Consensus       292 ---~~~~~viaHElaHqWfGnlVT~~~W~dlWLnEGfAtY~e~~~~~  335 (605)
T 3cia_A          292 ---KSLVNLIAHELAHSWSGNLVTNESWRDLWLNEGFTSYVENRIME  335 (605)
T ss_dssp             ---SCSTHHHHHHHHHTTBTTTEEESSTTSTHHHHHHHHHHHHHHHH
T ss_pred             ---HHHHHHHHHHHHHHhhccccccCcchHhHHHHHHHHHHHHHHHH
Confidence               13568999999999999999998       99999999998764

>2xq0_A LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: BES; 1.96A {Saccharomyces cerevisiae} PDB: 2xpz_A* 2xpy_A*

Probab=99.93  E-value=7.1e-27  Score=194.04  Aligned_cols=97  Identities=15%  Similarity=0.095  Sum_probs=80.5

Q ss_pred             CeEEEEEEcCCCC------------CchhHHHHhhCCCCCCCccCEEEe-CCCCCccccccccceeeccceeccCCCCcc
Q psy7253          12 LIKVSVVGSAKDV------------NSVPFLDSWARPAVRDCLDDLIAI-PDFGTGAMENWGLITYRETSILYDEQETSA   78 (119)
Q Consensus        12 ~i~v~v~~~~~~~------------~~l~~~e~~~~~~yp~~kld~v~~-P~~~~~~men~Gli~~~e~~ll~~~~~~~~   78 (119)
                      |+++++|++|+..            +.++++++++| +||++|+|+|++ |+|+.|||||||++ |.+..++.++     
T Consensus       220 g~~~~v~~~p~~~~~~~~~~~~~~~~~l~~~e~~fG-pYP~~k~d~v~~pp~f~~GgMEn~glt-~~~~~ll~~~-----  292 (632)
T 2xq0_A          220 GPRSTVYTEPFRLKDCQWEFENDVEKFIQTAEKIIF-EYEWGTYDILVNVDSYPYGGMESPNMT-FATPTLLAHD-----  292 (632)
T ss_dssp             ETTEEEEECHHHHHHHHHHHTTTHHHHHHHHHHHSC-CCCSSCCCEEECCTTCCSSEECCTTCE-EECGGGCCSS-----
T ss_pred             CCeeEEEEccchHHHHHHHHHHHHHHHHHHHHHhcc-cCCcccccEEEECCCCCCCccccceEE-EeeceeccCc-----
Confidence            5679999997532            34678999999 899999999999 59999999999985 5555555432     


Q ss_pred             ccchhhhhhHhhhhhHhhhcCCCCCC-------ChhHHHHHhhhhhc
Q psy7253          79 SGHNWVAVVVAHELAPIRHNAKVAKP-------ANGKTTFVYLFDFK  118 (119)
Q Consensus        79 ~~~~~~~~~iaHEiaHqWfGnlVt~~-------~EG~a~y~~~~~~~  118 (119)
                         ...+.+||||+|||||||+||++       |||||+|+++++.+
T Consensus       293 ---~~~~~viaHElAHqWfGnlVT~~~W~dlWLnEGfAtY~e~~~~~  336 (632)
T 2xq0_A          293 ---RSNIDVIAHELAHSWSGNLVTNCSWNHFWLNEGWTVYLERRIIG  336 (632)
T ss_dssp             ---SCSTHHHHHHHHHTTBTTTEEESSGGGTHHHHHHHHHHHHHHHH
T ss_pred             ---hhHHHHHHHHHHHHHhcCCCccCCcchhhHHHHHHHHHHHHHHH
Confidence               13578999999999999999999       99999999998764

>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}

Probab=99.66  E-value=5.7e-17  Score=134.16  Aligned_cols=110  Identities=13%  Similarity=0.035  Sum_probs=79.3

Q ss_pred             CCCCeEEEEEEcCC-CC----------CchhHHHHhhCCCCCCCccCEEEe-CCCCCcccccccc--ceeeccceeccCC
Q psy7253           9 REPLIKVSVVGSAK-DV----------NSVPFLDSWARPAVRDCLDDLIAI-PDFGTGAMENWGL--ITYRETSILYDEQ   74 (119)
Q Consensus         9 ~~~~i~v~v~~~~~-~~----------~~l~~~e~~~~~~yp~~kld~v~~-P~~~~~~men~Gl--i~~~e~~ll~~~~   74 (119)
                      +..|+|+++..... ..          +.+++++++|| +||++++++++. ++.+.|||||.+.  +.++++.+.....
T Consensus       179 ~~~g~p~~l~v~~~~~~d~~~~~~~~~~~~~~~~~~fG-~yP~~~Y~fl~~~~~~~~GgmEh~~st~l~~~~~~l~~~~~  257 (597)
T 4fgm_A          179 IAHGIKHSLVLSGRHYADTSRITADLAKICETQISLFE-EAPFQSYTFLTMVVGNGFGGLEHRNSTALLCSRKDLISAHQ  257 (597)
T ss_dssp             EETTEEEEEEEESSCCCCHHHHHHHHHHHHHHHHHHHT-SCSCSEEEEEEEEESSCCEEEECSSEEEEEEEGGGSCCTTC
T ss_pred             ccCCeEEEEEEEcCCCCCHHHHHHHHHHHHHHHHHHhC-CCCCCceEEEEEccCCCCcccccCCceEEEeCchhcccccc
Confidence            56789988644432 11          23567789999 799999999863 3458899999876  4467665332221


Q ss_pred             CCccccchhhhhhHhhhhhHhhhcCCCCCC------------------ChhHHHHHhhhhhcC
Q psy7253          75 ETSASGHNWVAVVVAHELAPIRHNAKVAKP------------------ANGKTTFVYLFDFKR  119 (119)
Q Consensus        75 ~~~~~~~~~~~~~iaHEiaHqWfGnlVt~~------------------~EG~a~y~~~~~~~~  119 (119)
                      ..+..+......+++||++||||||.|+|+                  +||||+|++.++..|
T Consensus       258 ~~~~~~~~~~~~liaHE~~H~W~g~~i~p~~~~~~d~~~~~~~~~lWl~EG~t~Y~~~l~~~r  320 (597)
T 4fgm_A          258 YEMNDNYQTFLSLCCHEYFHSWNIKTLKPKAFLPYQLEKESYTEQLWFYEGMTSYFDDYLLHT  320 (597)
T ss_dssp             CSCCHHHHHHHHHHHHHHHHTTBTTTBCBGGGSSCCCSSCCCCSTHHHHTHHHHHHHHHHHHH
T ss_pred             ccchhhhhchhhhHhhhhheeecccccccccccccccccccccccchhhhhHHHHHHHHHHHH
Confidence            123344556788999999999999999862                  999999999887643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	119
d3b7sa3	252	d.92.1.13 (A:209-460) Leukotriene A4 hydrolase cat	0.004

>d3b7sa3 d.92.1.13 (A:209-460) Leukotriene A4 hydrolase catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 252

class: Alpha and beta proteins (a+b)
fold: Zincin-like
superfamily: Metalloproteases ("zincins"), catalytic domain
family: Leukotriene A4 hydrolase catalytic domain
domain: Leukotriene A4 hydrolase catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (74), Expect = 0.004
 Identities = 16/69 (23%), Positives = 26/69 (37%), Gaps = 4/69 (5%)

Query: 26  SVPFLDSWARPAVRDCLDDLIAIPDFGTGAMENWGLITYRETSILYDEQETS----ASGH 81
            +   +    P V    D L+  P F  G MEN  L     T +  D+  ++       H
Sbjct: 32  MLKIAEDLGGPYVWGQYDLLVLPPSFPYGGMENPCLTFVTPTLLAGDKSLSNVIAHQISH 91

Query: 82  NWVAVVVAH 90
           +W   +V +
Sbjct: 92  SWTGNLVTN 100

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	119
d3b7sa3	252	Leukotriene A4 hydrolase catalytic domain {Human (	99.96
d1u4ga_	298	Elastase {Pseudomonas aeruginosa [TaxId: 287]}	89.66
d1r55a_	203	ADAM33 {Human (Homo sapiens) [TaxId: 9606]}	84.41
d1bqba_	301	Aureolysin {Staphylococcus aureus [TaxId: 1280]}	80.62

>d3b7sa3 d.92.1.13 (A:209-460) Leukotriene A4 hydrolase catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Zincin-like
superfamily: Metalloproteases ("zincins"), catalytic domain
family: Leukotriene A4 hydrolase catalytic domain
domain: Leukotriene A4 hydrolase catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=8.1e-32  Score=198.42  Aligned_cols=102  Identities=20%  Similarity=0.182  Sum_probs=86.5

Q ss_pred             eeCCCCeEEEEEEcCCCCC-----------chhHHHHhhCCCCCCCccCEEEe-CCCCCccccccccceeeccceeccCC
Q psy7253           7 SDREPLIKVSVVGSAKDVN-----------SVPFLDSWARPAVRDCLDDLIAI-PDFGTGAMENWGLITYRETSILYDEQ   74 (119)
Q Consensus         7 ~~~~~~i~v~v~~~~~~~~-----------~l~~~e~~~~~~yp~~kld~v~~-P~~~~~~men~Gli~~~e~~ll~~~~   74 (119)
                      +.++.|++|+||++|+..+           .+++++++++ |||++|+|+|++ |+++.+||||+|+++++++.++.+  
T Consensus         2 ~~~~~g~~vrv~~~p~~~~~~~~~l~~~~~~l~~~e~~~g-~YP~~k~d~v~~~~~~~~ggmE~~~l~~~~~~~~~~~--   78 (252)
T d3b7sa3           2 ESRQIGPRTLVWSEKEQVEKSAYEFSETESMLKIAEDLGG-PYVWGQYDLLVLPPSFPYGGMENPCLTFVTPTLLAGD--   78 (252)
T ss_dssp             EEEEEETTEEEEECGGGHHHHHHHTTTHHHHHHHHHHHHC-CCCSSCCEEEECCTTCSSSEECCTTEEEECGGGCCSS--
T ss_pred             CccccCCceEEEEccchHHHHHHHHHHHHHHHHHHHHhCC-CCCchhcCEEEeCCCccccccccceeeeecchhcccc--
Confidence            3445689999999998643           4678999997 799999999999 688889999999999999864322  


Q ss_pred             CCccccchhhhhhHhhhhhHhhhcCCCCCC-------ChhHHHHHhhhhhc
Q psy7253          75 ETSASGHNWVAVVVAHELAPIRHNAKVAKP-------ANGKTTFVYLFDFK  118 (119)
Q Consensus        75 ~~~~~~~~~~~~~iaHEiaHqWfGnlVt~~-------~EG~a~y~~~~~~~  118 (119)
                             ..+..+||||+|||||||+||++       +||||+|++.++.+
T Consensus        79 -------~~~~~~iaHE~aHqWfG~~Vt~~~w~~~WL~EG~a~y~~~~~~~  122 (252)
T d3b7sa3          79 -------KSLSNVIAHQISHSWTGNLVTNKTWDHFWLNEGHTVYLERHICG  122 (252)
T ss_dssp             -------STTTHHHHHHHHTTTBTTTEEESSGGGHHHHHHHHHHHHHHHHH
T ss_pred             -------chHHHHHHHHHHHHHHhhhceeccccchHhhccHHHHHHHHhhc
Confidence                   23567999999999999999999       99999999987653

>d1u4ga_ d.92.1.2 (A:) Elastase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Zincin-like
superfamily: Metalloproteases ("zincins"), catalytic domain
family: Thermolysin-like
domain: Elastase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.66  E-value=0.69  Score=33.22  Aligned_cols=81  Identities=15%  Similarity=0.090  Sum_probs=45.4

Q ss_pred             hHHHHhhCCCCCCCccCEEEeCCCCCccccccccceeeccceeccCCCCccccchhhhhhHhhhhhHhhhcCCCCCC---
Q psy7253          28 PFLDSWARPAVRDCLDDLIAIPDFGTGAMENWGLITYRETSILYDEQETSASGHNWVAVVVAHELAPIRHNAKVAKP---  104 (119)
Q Consensus        28 ~~~e~~~~~~yp~~kld~v~~P~~~~~~men~Gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHEiaHqWfGnlVt~~---  104 (119)
                      +|+.++++-. |++. .++..-.+. ...+|.   +..-+.+.+...... ........+|+||+.|-=.-.++...   
T Consensus        85 d~y~~~~gr~-~ld~-~~~~~vh~g-~~~~NA---fW~g~~m~fGdG~~~-~~~~~slDVvaHE~tHGvt~~~agl~y~~  157 (298)
T d1u4ga_          85 KLYRDWFGTS-PLTH-KLYMKVHYG-RSVENA---YWDGTAMLFGDGATM-FYPLVSLDVAAHEVSHGFTEQNSGLIYRG  157 (298)
T ss_dssp             HHHHHHHSSC-SSSS-CEEEEESCT-TTCCCE---EECSSCEEECCCCSS-BSCSCCHHHHHHHHHHHHHHTTTCCCSSH
T ss_pred             HHHHHHhCCC-CcCC-CceEEEecC-Cccccc---eeccceeeeecCCCc-cccccccceeeeeccceeeecccCccccC
Confidence            5788888864 4433 233333443 245554   333333444322111 11112356899999998777665554   


Q ss_pred             -----ChhHHHHHhhh
Q psy7253         105 -----ANGKTTFVYLF  115 (119)
Q Consensus       105 -----~EG~a~y~~~~  115 (119)
                           ||||+-++..+
T Consensus       158 qSGaLnE~~SDifg~~  173 (298)
T d1u4ga_         158 QSGGMNEAFSDMAGEA  173 (298)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             CccchhHHHHHHHHHH
Confidence                 99999998765

>d1r55a_ d.92.1.9 (A:) ADAM33 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Zincin-like
superfamily: Metalloproteases ("zincins"), catalytic domain
family: Reprolysin-like
domain: ADAM33
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.41  E-value=0.23  Score=33.03  Aligned_cols=14  Identities=29%  Similarity=0.249  Sum_probs=11.4

Q ss_pred             hhhhhHhhhhhHhh
Q psy7253          83 WVAVVVAHELAPIR   96 (119)
Q Consensus        83 ~~~~~iaHEiaHqW   96 (119)
                      ..+.++||||+|.+
T Consensus       131 ~~a~v~AHElGH~l  144 (203)
T d1r55a_         131 GAAATMAHEIGHSL  144 (203)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhc
Confidence            35679999999974

>d1bqba_ d.92.1.2 (A:) Aureolysin {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Zincin-like
superfamily: Metalloproteases ("zincins"), catalytic domain
family: Thermolysin-like
domain: Aureolysin
species: Staphylococcus aureus [TaxId: 1280]

Probab=80.62  E-value=0.77  Score=32.81  Aligned_cols=32  Identities=19%  Similarity=0.090  Sum_probs=24.9

Q ss_pred             hhhHhhhhhHhhhcCCCCCC--------ChhHHHHHhhhh
Q psy7253          85 AVVVAHELAPIRHNAKVAKP--------ANGKTTFVYLFD  116 (119)
Q Consensus        85 ~~~iaHEiaHqWfGnlVt~~--------~EG~a~y~~~~~  116 (119)
                      ..+|+||+.|-=.-.++...        +|||+-+++.+.
T Consensus       139 ~DVv~HE~~HGvt~~~~~l~y~~esGalnEg~sDi~g~~~  178 (301)
T d1bqba_         139 NDVVAHEITHGVTQQTANLEYKDQSGALNESFSDVFGYFV  178 (301)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHhhhhheeccccCcccccCccchhhHHHHHHHHHh
Confidence            47999999998776554443        999999998654