Psyllid ID: psy7450

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-
Protein Sequence
MFSEFNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQGPETLSIKHQVSEMLSIKHQGPETLSIKHQGPEMLSIKHQGPESAFDLRRNNQAHLNGRKDMMERLP
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccHHHHHHHHHcccccEEEEcccccccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccEEEcHHHHHHEEHcccccccccccccccHHHcHHHHHHHHHHHcccccccccccccccEEEcccccccHEEEccccccccccccccccccccccccccHHcccccccccHHHHHHHcHHHcccHHHHHHccc
Coil and Loop (DISEMBL)
mfsefnlpphtlfnpllqfrytcdscgkvyKLKRSLYRHRtlecgkepryqcphcpyrgkqkvhLKTHVAIkhqgpemlsvkhqgpemlsikhqgpetlSIKHQVSEMLsikhqgpetlsikhqgpemlsikhqgpesafdLRRNNQAHLNGRKDMMERLP
Flexible Loop (DISEMBL)
mfsefnlpphtlfnplLQFRYTCDSCGKVYKLKRSLYRHRtlecgkepryqcpHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQGPETLSIKHQVSEMLSIKHQGPETLSIKHQGPEMLSIKHQGPESAFDLRRNNqahlngrkdmmerlp
Low Complexity Region (SEG)
MFSEFNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQGPETLSIKHQVSEMLSIKHQGPETLSIKHQGPEMLSIKHQGPESAFDLRRNNQAHLNGRKDMMERLP
Disordered region (IsUnstruct)
********PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIK*****************************************************************************************
Disordered Region (DISOPRED)
********************YTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLS********************************************************E***DLR*NNQAHLNGRK*******
Disordered Region (DISEMBL)
MFSEFNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQGPETLSIKHQVSEMLSIKHQGPETLSIKHQGPEMLSIKHQGPESAFDLRRNNQAHLNGRKDMMERLP
Disordered Region (DISPRO)
****FNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQGPETLSIKHQVSEMLSIKHQGPETLSIKHQGPEMLSIKHQGPESAFDLRRNNQAHLNG*********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MFSEFNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQGPETLSIKHQVSEMLSIKHQGPETLSIKHQGPEMLSIKHQGPESAFDLRRNNQAHLNGRKDMMERLP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	161	2.2.26 [Sep-21-2011]
Q7KQZ4	787	Longitudinals lacking pro	yes	N/A	0.335	0.068	0.537	6e-13
P42283	891	Longitudinals lacking pro	no	N/A	0.304	0.054	0.54	2e-10
Q9V5M3	878	Longitudinals lacking pro	no	N/A	0.254	0.046	0.560	1e-09
Q867Z4	970	Longitudinals lacking pro	no	N/A	0.322	0.053	0.490	5e-09
O62836	800	Zinc finger X-chromosomal	yes	N/A	0.440	0.088	0.346	8e-05
Q95LI3	801	Zinc finger Y-chromosomal	yes	N/A	0.440	0.088	0.346	8e-05
P17010	805	Zinc finger X-chromosomal	yes	N/A	0.440	0.088	0.346	8e-05
Q6B4Z5	801	Zinc finger Y-chromosomal	no	N/A	0.440	0.088	0.333	0.0001
P08048	801	Zinc finger Y-chromosomal	no	N/A	0.440	0.088	0.333	0.0001
Q52V16	801	Zinc finger Y-chromosomal	N/A	N/A	0.440	0.088	0.333	0.0001

>sp|Q7KQZ4|LOLA3_DROME Longitudinals lacking protein, isoforms A/B/D/L OS=Drosophila melanogaster GN=lola PE=1 SV=1

 Score = 73.2 bits (178), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 29/54 (53%), Positives = 38/54 (70%)

Query: 21  YTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQ 74
           + C  CG+VYKLK SL  H+  ECGKEP++QCP C YR KQK+H+  H+   H+
Sbjct: 685 HPCPVCGRVYKLKSSLRNHQKWECGKEPQFQCPFCVYRAKQKMHIGRHMERMHK 738

Putative transcription factor required for axon growth and guidance in the central and peripheral nervous systems. Repels CNS axons away from the midline by promoting the expression of the midline repellent sli and its receptor robo.
Drosophila melanogaster (taxid: 7227)

>sp|P42283|LOLA1_DROME Longitudinals lacking protein, isoform G OS=Drosophila melanogaster GN=lola PE=1 SV=2

 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 1/50 (2%)

Query: 21  YTCDSCGKVYKLKRSLYRHRTLECG-KEPRYQCPHCPYRGKQKVHLKTHV 69
           Y C  CGK Y+ K +L RH  +ECG KEP +QCP+CPY+ KQ+ +L  HV
Sbjct: 791 YECRHCGKKYRWKSTLRRHENVECGGKEPSHQCPYCPYKSKQRGNLGVHV 840

Putative transcription factor required for axon growth and guidance in the central and peripheral nervous systems. Repels CNS axons away from the midline by promoting the expression of the midline repellent sli and its receptor robo.

Drosophila melanogaster (taxid: 7227)

>sp|Q9V5M3|LOLA6_DROME Longitudinals lacking protein, isoforms N/O/W/X/Y OS=Drosophila melanogaster GN=lola PE=1 SV=3

 Score = 62.0 bits (149), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/41 (56%), Positives = 30/41 (73%)

Query: 20  RYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGK 60
           +Y C+ CGK YK+K SL RH+  ECG EP  +CPHCP++ K
Sbjct: 708 KYACNVCGKTYKIKGSLKRHKNYECGVEPNLKCPHCPHKCK 748

Putative transcription factor required for axon growth and guidance in the central and peripheral nervous systems. Repels CNS axons away from the midline by promoting the expression of the midline repellent sli and its receptor robo.

Drosophila melanogaster (taxid: 7227)

>sp|Q867Z4|LOLA4_DROME Longitudinals lacking protein, isoforms F/I/K/T OS=Drosophila melanogaster GN=lola PE=1 SV=1

 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 26/53 (49%), Positives = 35/53 (66%), Gaps = 1/53 (1%)

Query: 18  QFRYTCDSCGKVYKLKRSLYRHRTLECG-KEPRYQCPHCPYRGKQKVHLKTHV 69
           + RY C  CGK Y+ K +L RH  +ECG KEP + CP+C Y+ KQ+ +L  HV
Sbjct: 900 ESRYVCRHCGKKYRWKSTLRRHENVECGGKEPCHPCPYCSYKAKQRGNLGVHV 952

Putative transcription factor required for axon growth and guidance in the central and peripheral nervous systems. Repels CNS axons away from the midline by promoting the expression of the midline repellent sli and its receptor robo.

Drosophila melanogaster (taxid: 7227)

>sp|O62836|ZFX_BOVIN Zinc finger X-chromosomal protein OS=Bos taurus GN=ZFX PE=2 SV=2

 Score = 46.2 bits (108), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 7/78 (8%)

Query: 2   FSEFNLPPHTLFNPLL------QFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC 55
           F E+      L N  L       F + C  CGK ++    L +H  +  G++P YQC +C
Sbjct: 518 FCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHMRIHTGEKP-YQCQYC 576

Query: 56  PYRGKQKVHLKTHVAIKH 73
            YR     +LKTHV  KH
Sbjct: 577 EYRSADSSNLKTHVKTKH 594

Probable transcriptional activator.

Bos taurus (taxid: 9913)

>sp|Q95LI3|ZFY_BOVIN Zinc finger Y-chromosomal protein OS=Bos taurus GN=ZFY PE=2 SV=1

 Score = 46.2 bits (108), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 7/78 (8%)

Query: 2   FSEFNLPPHTLFNPLL------QFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC 55
           F E+      L N  L       F + C  CGK ++    L +H  +  G++P YQC +C
Sbjct: 519 FCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHMRIHTGEKP-YQCQYC 577

Query: 56  PYRGKQKVHLKTHVAIKH 73
            YR     +LKTHV  KH
Sbjct: 578 EYRSADSSNLKTHVKTKH 595

Probable transcriptional activator. Binds to the consensus sequence 5'-AGGCCY-3'.

Bos taurus (taxid: 9913)

>sp|P17010|ZFX_HUMAN Zinc finger X-chromosomal protein OS=Homo sapiens GN=ZFX PE=2 SV=2

 Score = 46.2 bits (108), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 7/78 (8%)

Query: 2   FSEFNLPPHTLFNPLL------QFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC 55
           F E+      L N  L       F + C  CGK ++    L +H  +  G++P YQC +C
Sbjct: 523 FCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHMRIHTGEKP-YQCQYC 581

Query: 56  PYRGKQKVHLKTHVAIKH 73
            YR     +LKTHV  KH
Sbjct: 582 EYRSADSSNLKTHVKTKH 599

Probable transcriptional activator.

Homo sapiens (taxid: 9606)

>sp|Q6B4Z5|ZFY_PANTR Zinc finger Y-chromosomal protein OS=Pan troglodytes GN=ZFY PE=2 SV=1

 Score = 45.8 bits (107), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 7/78 (8%)

Query: 2   FSEFNLPPHTLFNPLL------QFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC 55
           F E+      L N  L       F + C  CGK ++    L +H  +  G++P YQC +C
Sbjct: 519 FCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHMRIHTGEKP-YQCQYC 577

Query: 56  PYRGKQKVHLKTHVAIKH 73
            YR     +LKTH+  KH
Sbjct: 578 EYRSADSSNLKTHIKTKH 595

Probable transcriptional activator. Binds to the consensus sequence 5'-AGGCCY-3'.

Pan troglodytes (taxid: 9598)

>sp|P08048|ZFY_HUMAN Zinc finger Y-chromosomal protein OS=Homo sapiens GN=ZFY PE=1 SV=3

 Score = 45.8 bits (107), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 7/78 (8%)

Query: 2   FSEFNLPPHTLFNPLL------QFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC 55
           F E+      L N  L       F + C  CGK ++    L +H  +  G++P YQC +C
Sbjct: 519 FCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELRKHMRIHTGEKP-YQCQYC 577

Query: 56  PYRGKQKVHLKTHVAIKH 73
            YR     +LKTH+  KH
Sbjct: 578 EYRSADSSNLKTHIKTKH 595

Probable transcriptional activator. Binds to the consensus sequence 5'-AGGCCY-3'.

Homo sapiens (taxid: 9606)

>sp|Q52V16|ZFY_GORGO Zinc finger Y-chromosomal protein OS=Gorilla gorilla gorilla GN=ZFY PE=3 SV=1

 Score = 45.8 bits (107), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 7/78 (8%)

Query: 2   FSEFNLPPHTLFNPLL------QFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC 55
           F E+      L N  L       F + C  CGK ++    L +H  +  G++P YQC +C
Sbjct: 519 FCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHMRIHTGEKP-YQCQYC 577

Query: 56  PYRGKQKVHLKTHVAIKH 73
            YR     +LKTH+  KH
Sbjct: 578 EYRSADSSNLKTHIKTKH 595

Probable transcriptional activator. Binds to the consensus sequence 5'-AGGCCY-3'.

Gorilla gorilla gorilla (taxid: 9595)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	161
428164771	316	hypothetical protein GUITHDRAFT_52591, p	0.416	0.212	0.507	3e-13
270003818	92	hypothetical protein TcasGA2_TC003099 [T	0.335	0.586	0.574	3e-12
157121098	731	lola [Aedes aegypti] gi|108874717|gb|EAT	0.335	0.073	0.537	1e-11
255522809	444	longitudinals lacking isoform 8 [Triboli	0.391	0.141	0.444	2e-11
312374696	238	hypothetical protein AND_15641 [Anophele	0.521	0.352	0.379	3e-11
24652482	787	longitudinals lacking, isoform C [Drosop	0.335	0.068	0.537	3e-11
29539411	786	Lola protein isoform L [Drosophila melan	0.335	0.068	0.537	3e-11
255522799	468	longitudinals lacking isoform 3 [Triboli	0.385	0.132	0.467	5e-11
195425431	220	GK19011 [Drosophila willistoni] gi|19415	0.447	0.327	0.459	1e-10
357631265	287	lola [Danaus plexippus]	0.298	0.167	0.555	1e-10

>gi|428164771|gb|EKX33785.1| hypothetical protein GUITHDRAFT_52591, partial [Guillardia theta CCMP2712]

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 34/67 (50%), Positives = 53/67 (79%)

Query: 70  AIKHQGPEMLSVKHQGPEMLSIKHQGPETLSIKHQVSEMLSIKHQGPETLSIKHQGPEML 129
           + +H+GP +LS +H+GP +LSI+H+GP  LSI+H+   +LS +H+GP  LSI+H+GP +L
Sbjct: 1   SSRHRGPCLLSSRHRGPCLLSIRHRGPWLLSIRHRGPWLLSSRHRGPWLLSIRHRGPWLL 60

Query: 130 SIKHQGP 136
           S +H+GP
Sbjct: 61  SSRHRGP 67

Source: Guillardia theta CCMP2712

Species: Guillardia theta

Genus: Guillardia

Family: Geminigeraceae

Order: Pyrenomonadales

Class: Cryptophyta

Superkingdom: Eukaryota

>gi|270003818|gb|EFA00266.1| hypothetical protein TcasGA2_TC003099 [Tribolium castaneum]

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 31/54 (57%), Positives = 41/54 (75%)

Query: 21 YTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQ 74
          + CD+CG+ YK K SLY HR  ECGKEP+++C +CPY+GKQK+H   HV  KH+
Sbjct: 26 FVCDNCGRSYKRKSSLYNHRRWECGKEPQFKCSYCPYKGKQKIHFVMHVMAKHK 79

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157121098|ref|XP_001659824.1| lola [Aedes aegypti] gi|108874717|gb|EAT38942.1| AAEL009212-PC [Aedes aegypti]

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/54 (53%), Positives = 39/54 (72%)

Query: 21  YTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQ 74
           + C  CG+VYKLK SL  H+  ECGKEP++QCP+C YR KQK+H+  H+   H+
Sbjct: 650 FACPDCGRVYKLKSSLRNHQKWECGKEPQFQCPYCVYRAKQKMHIGRHMERMHK 703

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|255522809|ref|NP_001157317.1| longitudinals lacking isoform 8 [Tribolium castaneum]

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 44/63 (69%)

Query: 20  RYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEML 79
           ++ C  CG+ YKL+ SL  H+  ECGK+P+++CPHCPY+ KQK+H++ H+   H+  +  
Sbjct: 370 KFACPQCGRYYKLRSSLRNHQKWECGKDPQFECPHCPYKAKQKMHVRRHIERMHKIIDYD 429

Query: 80  SVK 82
            VK
Sbjct: 430 DVK 432

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312374696|gb|EFR22194.1| hypothetical protein AND_15641 [Anopheles darlingi]

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 53/87 (60%), Gaps = 3/87 (3%)

Query: 19  FRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEM 78
           + ++C  CG+ YKLK SL  H+  ECGKEP++QCP+C YR KQK+H+  H+   H+    
Sbjct: 155 YGFSCQDCGRSYKLKSSLRNHQKWECGKEPQFQCPYCVYRAKQKMHIGRHMERMHKER-- 212

Query: 79  LSVKHQGPEMLSIKHQGPETLSIKHQV 105
              K +G ++++++      L + H V
Sbjct: 213 -FFKMEGDKVIALEDPSSMALDLNHTV 238

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|24652482|ref|NP_724946.1| longitudinals lacking, isoform C [Drosophila melanogaster] gi|78711864|ref|NP_724949.2| longitudinals lacking, isoform B [Drosophila melanogaster] gi|73920870|sp|Q7KQZ4.1|LOLA3_DROME RecName: Full=Longitudinals lacking protein, isoforms A/B/D/L gi|7303724|gb|AAF58773.1| longitudinals lacking, isoform C [Drosophila melanogaster] gi|71911713|gb|AAF58776.3| longitudinals lacking, isoform B [Drosophila melanogaster]

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/54 (53%), Positives = 38/54 (70%)

Query: 21  YTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQ 74
           + C  CG+VYKLK SL  H+  ECGKEP++QCP C YR KQK+H+  H+   H+
Sbjct: 685 HPCPVCGRVYKLKSSLRNHQKWECGKEPQFQCPFCVYRAKQKMHIGRHMERMHK 738

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|29539411|dbj|BAC67588.1| Lola protein isoform L [Drosophila melanogaster] gi|29539451|dbj|BAC67608.1| Lola protein isoform L [Drosophila melanogaster] gi|29539491|dbj|BAC67628.1| Lola protein isoform L [Drosophila melanogaster] gi|29539531|dbj|BAC67648.1| Lola protein isoform L [Drosophila melanogaster]

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/54 (53%), Positives = 38/54 (70%)

Query: 21  YTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQ 74
           + C  CG+VYKLK SL  H+  ECGKEP++QCP C YR KQK+H+  H+   H+
Sbjct: 684 HPCPVCGRVYKLKSSLRNHQKWECGKEPQFQCPFCVYRAKQKMHIGRHMERMHK 737

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|255522799|ref|NP_001157312.1| longitudinals lacking isoform 3 [Tribolium castaneum]

 Score = 72.8 bits (177), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 43/62 (69%)

Query: 21  YTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLS 80
           + C  CG++YKLK SL  H+  ECGKEP+++CP+C Y+ KQK+H+  H+   H+  +  S
Sbjct: 394 FDCSVCGRIYKLKSSLRNHQKWECGKEPQFKCPYCVYKAKQKMHMARHMERMHREVDYSS 453

Query: 81  VK 82
           VK
Sbjct: 454 VK 455

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195425431|ref|XP_002061011.1| GK19011 [Drosophila willistoni] gi|194157096|gb|EDW71997.1| GK19011 [Drosophila willistoni]

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/74 (45%), Positives = 48/74 (64%), Gaps = 2/74 (2%)

Query: 13  FNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIK 72
           FN L + ++ C+ CGK YK+K SL RH+  ECG EP  +CPHCP++ K K  L+ H+  K
Sbjct: 145 FN-LDEAKFACNVCGKTYKIKGSLKRHKNYECGVEPTLKCPHCPHKCKYKSDLRKHMNQK 203

Query: 73  H-QGPEMLSVKHQG 85
           H +  E L++ H G
Sbjct: 204 HAESGESLTIIHMG 217

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357631265|gb|EHJ78855.1| lola [Danaus plexippus]

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/54 (55%), Positives = 40/54 (74%)

Query: 21  YTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQ 74
           +TC  CG+VYKLK SL  H+  ECGKEP++QCP+C YR KQK+H+  H+   H+
Sbjct: 215 FTCPDCGRVYKLKSSLRNHQKWECGKEPQFQCPYCVYRAKQKMHIARHMERMHR 268

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	161
ZFIN|ZDB-GENE-050208-626	256	si:dkey-15h8.15 "si:dkey-15h8.	0.329	0.207	0.472	5.8e-11
FB|FBgn0005630	970	lola "longitudinals lacking" [	0.347	0.057	0.508	6.3e-10
ZFIN|ZDB-GENE-020806-1	639	plagl2 "pleiomorphic adenoma g	0.546	0.137	0.288	3.9e-08
ZFIN|ZDB-GENE-060503-194	1084	znf516 "zinc finger protein 51	0.298	0.044	0.408	6.5e-08
UNIPROTKB|P80944	148	ZFX "Zinc finger X-chromosomal	0.335	0.364	0.4	8.7e-08
UNIPROTKB|Q29419	148	ZFY "Zinc finger Y-chromosomal	0.335	0.364	0.4	8.7e-08
ZFIN|ZDB-GENE-070424-49	459	zgc:162972 "zgc:162972" [Danio	0.391	0.137	0.4	1.7e-07
UNIPROTKB|G3V1R3	906	ZEB1 "Zinc finger E-box-bindin	0.770	0.136	0.283	2.1e-07
UNIPROTKB|O42424	179	ZNF6 "ZNF6 protein" [Gallus ga	0.335	0.301	0.381	2.3e-07
WB|WBGene00009937	318	lsl-1 [Caenorhabditis elegans	0.447	0.226	0.341	2.4e-07

ZFIN|ZDB-GENE-050208-626 si:dkey-15h8.15 "si:dkey-15h8.15" [Danio rerio (taxid:7955)]

 Score = 133 (51.9 bits), Expect = 5.8e-11, Sum P(2) = 5.8e-11
 Identities = 26/55 (47%), Positives = 32/55 (58%)

Query:    21 YTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQG 75
             YTC  CGK Y LK +L RH  +  G+ P Y+C HC  R   + +LKTH  I H G
Sbjct:    62 YTCTQCGKSYNLKETLKRHLIIHTGERP-YKCSHCDMRFNNRGNLKTHKLI-HTG 114

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

FB|FBgn0005630 lola "longitudinals lacking" [Drosophila melanogaster (taxid:7227)]

 Score = 155 (59.6 bits), Expect = 6.3e-10, P = 6.3e-10
 Identities = 30/59 (50%), Positives = 38/59 (64%)

Query:    20 RYTCDSCGKVYKLKRSLYRHRTLECG-KEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPE 77
             RY C  CGK Y+ K +L RH  +ECG KEP + CP+C Y+ KQ+ +L  HV  KH  PE
Sbjct:   902 RYVCRHCGKKYRWKSTLRRHENVECGGKEPCHPCPYCSYKAKQRGNLGVHVR-KHH-PE 958

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISS

GO:0007411 "axon guidance" evidence=IGI;NAS;IMP

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;NAS

GO:0007409 "axonogenesis" evidence=IMP

GO:0005634 "nucleus" evidence=NAS;IDA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=NAS

GO:0016199 "axon midline choice point recognition" evidence=IGI;IMP

GO:0005515 "protein binding" evidence=IPI

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0019730 "antimicrobial humoral response" evidence=IMP

GO:0045476 "nurse cell apoptotic process" evidence=IMP

GO:0045467 "R7 cell development" evidence=IMP

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IMP

GO:0007464 "R3/R4 cell fate commitment" evidence=IMP

GO:0048854 "brain morphogenesis" evidence=IMP

GO:0031987 "locomotion involved in locomotory behavior" evidence=IMP

GO:0001964 "startle response" evidence=IMP

GO:0002121 "inter-male aggressive behavior" evidence=IMP

GO:0008406 "gonad development" evidence=IMP

GO:0022008 "neurogenesis" evidence=IMP

ZFIN|ZDB-GENE-020806-1 plagl2 "pleiomorphic adenoma gene-like 2" [Danio rerio (taxid:7955)]

 Score = 136 (52.9 bits), Expect = 3.9e-08, P = 3.9e-08
 Identities = 26/90 (28%), Positives = 48/90 (53%)

Query:    20 RYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEML 79
             ++ CD C + +  ++ + RH  +  G++  + C +C  R  +K HL  HV   H   E+L
Sbjct:   255 KHPCDHCDRRFYTRKDVRRHMVVHTGRKD-FLCQYCAQRFGRKDHLTRHVKKSHS-QELL 312

Query:    80 SVKHQGPEMLSIKHQGPETLSIKHQVSEML 109
              +K + P+ML I   G    ++K ++S M+
Sbjct:   313 KIKTEPPDMLGILGSGSPPCAVKEEISPMM 342

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0000981 "sequence-specific DNA binding RNA polymerase II transcription factor activity" evidence=IBA

GO:0006917 "induction of apoptosis" evidence=IBA

GO:0005634 "nucleus" evidence=IBA

ZFIN|ZDB-GENE-060503-194 znf516 "zinc finger protein 516" [Danio rerio (taxid:7955)]

 Score = 118 (46.6 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
 Identities = 20/49 (40%), Positives = 30/49 (61%)

Query:    21 YTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHV 69
             +TC+ CG+ +    SL +H     G++P Y+CPHC +R  QK  LK H+
Sbjct:    30 HTCELCGRSFPFLSSLSQHMRKHTGEKP-YKCPHCEHRSAQKGSLKAHI 77

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|P80944 ZFX "Zinc finger X-chromosomal protein" [Sus scrofa (taxid:9823)]

 Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
 Identities = 22/55 (40%), Positives = 31/55 (56%)

Query:    19 FRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKH 73
             F + C  CGK ++    L +H  +  G++P YQC +C YR     +LKTHV  KH
Sbjct:    74 FPHICVECGKGFRHPSELKKHMRIHTGEKP-YQCQYCEYRSADSSNLKTHVKTKH 127

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q29419 ZFY "Zinc finger Y-chromosomal protein" [Sus scrofa (taxid:9823)]

 Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
 Identities = 22/55 (40%), Positives = 31/55 (56%)

Query:    19 FRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKH 73
             F + C  CGK ++    L +H  +  G++P YQC +C YR     +LKTHV  KH
Sbjct:    74 FPHICVECGKGFRHPSELKKHMRIHTGEKP-YQCQYCEYRSADSSNLKTHVKTKH 127

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

ZFIN|ZDB-GENE-070424-49 zgc:162972 "zgc:162972" [Danio rerio (taxid:7955)]

 Score = 128 (50.1 bits), Expect = 1.7e-07, P = 1.7e-07
 Identities = 26/65 (40%), Positives = 36/65 (55%)

Query:    21 YTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLS 80
             YTC  CGK + +K++L RH  +  G++P Y CP C    + K  LK HV I H G +  S
Sbjct:   199 YTCQECGKSFAIKQNLERHMRIHTGEKP-YSCPECGRSFRVKQDLKIHVRI-HTGEKPFS 256

Query:    81 VKHQG 85
              +  G
Sbjct:   257 CQQCG 261

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|G3V1R3 ZEB1 "Zinc finger E-box-binding homeobox 1" [Homo sapiens (taxid:9606)]

 Score = 131 (51.2 bits), Expect = 2.1e-07, P = 2.1e-07
 Identities = 38/134 (28%), Positives = 57/134 (42%)

Query:     8 PPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKT 67
             PP           Y CD C K+++   SL RH+    GK P ++C  C    K K HL  
Sbjct:   673 PPKKKMRKTENGMYACDLCDKIFQKSSSLLRHKYEHTGKRP-HECGICKKAFKHKHHLIE 731

Query:    68 HVAIKHQGPEMLSVKHQGPEMLSIKHQGPETLSIKHQVSEMLSIKHQGPETLSIKHQ--G 125
             H+ + H G +       G       H G  +  + H+ S     K +  E  S + +  G
Sbjct:   732 HMRL-HSGEKPYQCDKCGKRF---SHSGSYSQHMNHRYSYC---KREAEERDSTEQEEAG 784

Query:   126 PEMLSIKHQGPESA 139
             PE+LS +H G  ++
Sbjct:   785 PEILSNEHVGARAS 798

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0003690 "double-stranded DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0005667 "transcription factor complex" evidence=IEA

GO:0007389 "pattern specification process" evidence=IEA

GO:0008134 "transcription factor binding" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0010464 "regulation of mesenchymal cell proliferation" evidence=IEA

GO:0014823 "response to activity" evidence=IEA

GO:0017015 "regulation of transforming growth factor beta receptor signaling pathway" evidence=IEA

GO:0030857 "negative regulation of epithelial cell differentiation" evidence=IEA

GO:0030900 "forebrain development" evidence=IEA

GO:0031667 "response to nutrient levels" evidence=IEA

GO:0033081 "regulation of T cell differentiation in thymus" evidence=IEA

GO:0045666 "positive regulation of neuron differentiation" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0048596 "embryonic camera-type eye morphogenesis" evidence=IEA

GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA

GO:0051150 "regulation of smooth muscle cell differentiation" evidence=IEA

GO:0051216 "cartilage development" evidence=IEA

GO:0070888 "E-box binding" evidence=IEA

GO:0071230 "cellular response to amino acid stimulus" evidence=IEA

GO:0071560 "cellular response to transforming growth factor beta stimulus" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

UNIPROTKB|O42424 ZNF6 "ZNF6 protein" [Gallus gallus (taxid:9031)]

 Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
 Identities = 21/55 (38%), Positives = 31/55 (56%)

Query:    19 FRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKH 73
             F + C  CGK ++    L +H     G++P YQC HC +R   + +LKTH+  KH
Sbjct:    97 FPHVCVECGKGFRHPSELKKHMRTHTGEKP-YQCQHCVFRCADQSNLKTHIKTKH 150

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

WB|WBGene00009937 lsl-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 124 (48.7 bits), Expect = 2.4e-07, P = 2.4e-07
 Identities = 27/79 (34%), Positives = 43/79 (54%)

Query:     1 MFSEFN-LPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC--PY 57
             MF  +  L  H++ +   +  Y CD CG+ ++ K +++ HRT+  G  P Y CP C   +
Sbjct:    45 MFMNYKGLQQHSVIHTDTK-PYICDVCGRGFRYKSNMFEHRTVHTGYTP-YVCPFCGKQF 102

Query:    58 R--GKQKVHLKTHVAIKHQ 74
             R  G  K H++THV  K +
Sbjct:   103 RLKGNMKKHMRTHVTSKEE 121

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	161
KOG2462|consensus	279		99.93
KOG2462|consensus	279		99.87
KOG1074|consensus	958		99.67
KOG3576|consensus	267		99.6
KOG1074|consensus	958		99.57
KOG3623|consensus	1007		99.5
KOG3623|consensus	1007		99.5
KOG3608|consensus	467		99.47
KOG3576|consensus	267		99.35
KOG3608|consensus	467		99.27
PHA02768	55	hypothetical protein; Provisional	99.06
PHA00733	128	hypothetical protein	98.92
PHA00733	128	hypothetical protein	98.9
PLN03086	567	PRLI-interacting factor K; Provisional	98.89
PHA02768	55	hypothetical protein; Provisional	98.88
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.81
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.66
PLN03086	567	PRLI-interacting factor K; Provisional	98.58
PHA00616	44	hypothetical protein	98.54
KOG3993|consensus	500		98.44
PHA00732	79	hypothetical protein	98.35
PHA00616	44	hypothetical protein	98.33
PHA00732	79	hypothetical protein	98.22
KOG3993|consensus	500		98.15
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.92
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.92
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.8
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.67
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.59
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.42
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.4
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.31
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.3
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.27
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.24
PRK04860	160	hypothetical protein; Provisional	97.04
smart00355	26	ZnF_C2H2 zinc finger.	96.96
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	96.74
smart00355	26	ZnF_C2H2 zinc finger.	96.73
COG5189	423	SFP1 Putative transcriptional repressor regulating	96.72
PRK04860	160	hypothetical protein; Provisional	96.65
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	96.64
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.37
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.28
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.27
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.0
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	95.29
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	94.83
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	94.27
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	93.29
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	93.17
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	92.03
KOG1146|consensus	1406		91.6
COG5048	467	FOG: Zn-finger [General function prediction only]	91.03
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	90.34
COG5048	467	FOG: Zn-finger [General function prediction only]	90.09
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	88.25
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	87.61
COG1592	166	Rubrerythrin [Energy production and conversion]	87.2
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	87.08
KOG2893|consensus	341		86.63
KOG2186|consensus	276		85.88
KOG2231|consensus	669		84.3
KOG1146|consensus	1406		83.6
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	83.47
COG4049	65	Uncharacterized protein containing archaeal-type C	82.5
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	82.34
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	82.31

>KOG2462|consensus

Probab=99.93  E-value=5.6e-27  Score=165.80  Aligned_cols=122  Identities=22%  Similarity=0.283  Sum_probs=111.9

Q ss_pred             CCCCCCCCccccCCCC---CcccccccccccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCc
Q psy7450           2 FSEFNLPPHTLFNPLL---QFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEM   78 (161)
Q Consensus         2 ~~~~~l~~H~~~~h~~---~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~   78 (161)
                      .+.++|.+|... |-.   .+.+.|.+|++.|.+...|..|+++|+   -+++|.+||+.|.++--|+-|+|+|+|||| 
T Consensus       141 sT~snLsrHkQ~-H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~---l~c~C~iCGKaFSRPWLLQGHiRTHTGEKP-  215 (279)
T KOG2462|consen  141 STSSNLSRHKQT-HRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT---LPCECGICGKAFSRPWLLQGHIRTHTGEKP-  215 (279)
T ss_pred             ccccccchhhcc-cccccccccccCCCCCceeeehHHHhhHhhccC---CCcccccccccccchHHhhcccccccCCCC-
Confidence            466789999988 633   567999999999999999999999985   479999999999999999999999999999 


Q ss_pred             cccCCCCCccccccccCCCccchhhhhhhhhhcccCCCCCcCcccCCCcccCcCcCCCcchhhccccccccccC
Q psy7450          79 LSVKHQGPEMLSIKHQGPETLSIKHQVSEMLSIKHQGPETLSIKHQGPEMLSIKHQGPESAFDLRRNNQAHLNG  152 (161)
Q Consensus        79 ~~C~~C~k~f~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~c~~c~~~~~~~~~~~f~~~~~l~~H~~~  152 (161)
                      |.|+.|+|+|+.+++               | ..|+.+|.+.++|+|+.|        +|+|..++.|..|.-+
T Consensus       216 F~C~hC~kAFADRSN---------------L-RAHmQTHS~~K~~qC~~C--------~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  216 FSCPHCGKAFADRSN---------------L-RAHMQTHSDVKKHQCPRC--------GKSFALKSYLNKHSES  265 (279)
T ss_pred             ccCCcccchhcchHH---------------H-HHHHHhhcCCccccCcch--------hhHHHHHHHHHHhhhh
Confidence            999999999999999               7 779999999999999999        9999999999999743

>KOG2462|consensus

Probab=99.87  E-value=4.2e-23  Score=146.23  Aligned_cols=114  Identities=24%  Similarity=0.309  Sum_probs=100.7

Q ss_pred             CCcccccccccccccCHHHHHHHHHHhcC--CCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCcccccccc
Q psy7450          17 LQFRYTCDSCGKVYKLKRSLYRHRTLECG--KEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQ   94 (161)
Q Consensus        17 ~~k~~~C~~C~~~f~~~~~l~~H~~~h~~--~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~~~~~   94 (161)
                      ....|.|+.||+.+.+.++|.+|+.+|-.  +.+.+.|+.||+.+..-..|..|+|+|+  -+ ++|.+|||.|+++=- 
T Consensus       127 ~~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~-c~C~iCGKaFSRPWL-  202 (279)
T KOG2462|consen  127 KHPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LP-CECGICGKAFSRPWL-  202 (279)
T ss_pred             cCCceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CC-cccccccccccchHH-
Confidence            34569999999999999999999998754  2578999999999999999999999998  34 999999999986533 


Q ss_pred             CCCccchhhhhhhhhhcccCCCCCcCcccCCCcccCcCcCCCcchhhccccccccccChhhhh
Q psy7450          95 GPETLSIKHQVSEMLSIKHQGPETLSIKHQGPEMLSIKHQGPESAFDLRRNNQAHLNGRKDMM  157 (161)
Q Consensus        95 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~c~~c~~~~~~~~~~~f~~~~~l~~H~~~~~~~~  157 (161)
                                    | ..|.++||||+||.|+.|        +|+|.-|+||++||..+-+..
T Consensus       203 --------------L-QGHiRTHTGEKPF~C~hC--------~kAFADRSNLRAHmQTHS~~K  242 (279)
T KOG2462|consen  203 --------------L-QGHIRTHTGEKPFSCPHC--------GKAFADRSNLRAHMQTHSDVK  242 (279)
T ss_pred             --------------h-hcccccccCCCCccCCcc--------cchhcchHHHHHHHHhhcCCc
Confidence                          4 779999999999999999        999999999999998776543

>KOG1074|consensus

Probab=99.67  E-value=1.3e-17  Score=133.00  Aligned_cols=81  Identities=15%  Similarity=0.122  Sum_probs=68.9

Q ss_pred             CeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCccccccccCCCccchhhhhhhhhhcccCCCCC----cCcccC
Q psy7450          49 RYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQGPETLSIKHQVSEMLSIKHQGPET----LSIKHQ  124 (161)
Q Consensus        49 ~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----~~~~~~  124 (161)
                      |-+|.+|-++..-.+.|+.|.|+|+||+| |+|.+||++|.++.+               | ..|+.+|.    ....+.
T Consensus       605 PNqCiiC~rVlSC~saLqmHyrtHtGERP-FkCKiCgRAFtTkGN---------------L-kaH~~vHka~p~~R~q~S  667 (958)
T KOG1074|consen  605 PNQCIICLRVLSCPSALQMHYRTHTGERP-FKCKICGRAFTTKGN---------------L-KAHMSVHKAKPPARVQFS  667 (958)
T ss_pred             ccceeeeeecccchhhhhhhhhcccCcCc-cccccccchhccccc---------------h-hhcccccccCcccccccc
Confidence            56899999999999999999999999999 999999999998887               4 44554444    346788


Q ss_pred             CC---cccCcCcCCCcchhhccccccccccChh
Q psy7450         125 GP---EMLSIKHQGPESAFDLRRNNQAHLNGRK  154 (161)
Q Consensus       125 c~---~c~~~~~~~~~~~f~~~~~l~~H~~~~~  154 (161)
                      ||   .|        -+-|.....|..|.|.|-
T Consensus       668 cP~~~ic--------~~kftn~V~lpQhIriH~  692 (958)
T KOG1074|consen  668 CPSTFIC--------QKKFTNAVTLPQHIRIHL  692 (958)
T ss_pred             CCchhhh--------cccccccccccceEEeec
Confidence            99   99        999999999999987653

>KOG3576|consensus

Probab=99.60  E-value=3.4e-17  Score=111.65  Aligned_cols=119  Identities=18%  Similarity=0.133  Sum_probs=94.1

Q ss_pred             CCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCccccccccC
Q psy7450          16 LLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQG   95 (161)
Q Consensus        16 ~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~~~~~~   95 (161)
                      ++...|.|.+|++.|.....|.+|++.|.. .+.+.|..||+.|...-+|++|+|+|+|.+| |+|..|+++|...-++.
T Consensus       113 sd~d~ftCrvCgK~F~lQRmlnrh~kch~~-vkr~lct~cgkgfndtfdlkrh~rthtgvrp-ykc~~c~kaftqrcsle  190 (267)
T KOG3576|consen  113 SDQDSFTCRVCGKKFGLQRMLNRHLKCHSD-VKRHLCTFCGKGFNDTFDLKRHTRTHTGVRP-YKCSLCEKAFTQRCSLE  190 (267)
T ss_pred             CCCCeeeeehhhhhhhHHHHHHHHhhhccH-HHHHHHhhccCcccchhhhhhhhccccCccc-cchhhhhHHHHhhccHH
Confidence            345569999999999999999999999999 9999999999999999999999999999999 99999999998653311


Q ss_pred             CCccchhhhhhhhhhcccCCCC------CcCcccCCCcccCcCcCCCcchhhccccccccccChhh
Q psy7450          96 PETLSIKHQVSEMLSIKHQGPE------TLSIKHQGPEMLSIKHQGPESAFDLRRNNQAHLNGRKD  155 (161)
Q Consensus        96 ~~~~~~~~~~~~~l~~~~~~~~------~~~~~~~c~~c~~~~~~~~~~~f~~~~~l~~H~~~~~~  155 (161)
                      .           .+...|...+      ..++.|.|.+|        |.+-.....+..|++.++.
T Consensus       191 s-----------hl~kvhgv~~~yaykerr~kl~vcedc--------g~t~~~~e~~~~h~~~~hp  237 (267)
T KOG3576|consen  191 S-----------HLKKVHGVQHQYAYKERRAKLYVCEDC--------GYTSERPEVYYLHLKLHHP  237 (267)
T ss_pred             H-----------HHHHHcCchHHHHHHHhhhheeeeccc--------CCCCCChhHHHHHHHhcCC
Confidence            1           1111122111      13678999999        8887777777777765443

>KOG1074|consensus

Probab=99.57  E-value=4.6e-16  Score=124.25  Aligned_cols=56  Identities=29%  Similarity=0.451  Sum_probs=51.7

Q ss_pred             ccccccccccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCC
Q psy7450          20 RYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGP   76 (161)
Q Consensus        20 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~   76 (161)
                      +.+|..|++.|...+.|+.|.++|+| ++||+|++||..|..+.+|+.|...|+...
T Consensus       353 khkCr~CakvfgS~SaLqiHlRSHTG-ERPfqCnvCG~~FSTkGNLKvH~~rH~e~~  408 (958)
T KOG1074|consen  353 KHKCRFCAKVFGSDSALQIHLRSHTG-ERPFQCNVCGNRFSTKGNLKVHFQRHREKY  408 (958)
T ss_pred             cchhhhhHhhcCchhhhhhhhhccCC-CCCeeecccccccccccceeeeeeeccccC
Confidence            46899999999999999999999999 999999999999999999999988776544

>KOG3623|consensus

Probab=99.50  E-value=5.6e-15  Score=116.78  Aligned_cols=76  Identities=25%  Similarity=0.385  Sum_probs=70.8

Q ss_pred             CCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCccccccc
Q psy7450          16 LLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKH   93 (161)
Q Consensus        16 ~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~~~~   93 (161)
                      +....|.|+.|++.|...+.|.+|.-.|+| .+||+|.+|.++|..+..|..|+|.|.|+|| |+|+.|+|.|+...+
T Consensus       890 te~gmyaCDqCDK~FqKqSSLaRHKYEHsG-qRPyqC~iCkKAFKHKHHLtEHkRLHSGEKP-fQCdKClKRFSHSGS  965 (1007)
T KOG3623|consen  890 TEDGMYACDQCDKAFQKQSSLARHKYEHSG-QRPYQCIICKKAFKHKHHLTEHKRLHSGEKP-FQCDKCLKRFSHSGS  965 (1007)
T ss_pred             CccccchHHHHHHHHHhhHHHHHhhhhhcC-CCCcccchhhHhhhhhhhhhhhhhhccCCCc-chhhhhhhhcccccc
Confidence            345689999999999999999999999999 9999999999999999999999999999999 999999999985443

>KOG3623|consensus

Probab=99.50  E-value=2.9e-15  Score=118.36  Aligned_cols=82  Identities=16%  Similarity=0.169  Sum_probs=77.5

Q ss_pred             CCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCccccccccCCCccchhhhhhhhhhcccCCCCCcCcccCCC
Q psy7450          47 EPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQGPETLSIKHQVSEMLSIKHQGPETLSIKHQGP  126 (161)
Q Consensus        47 ~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~c~  126 (161)
                      +-+|.|+.|+++|...+.|.+|.--|+|.+| |+|.+|.|+|..+.+               | ..|.+.|.|++||+|+
T Consensus       892 ~gmyaCDqCDK~FqKqSSLaRHKYEHsGqRP-yqC~iCkKAFKHKHH---------------L-tEHkRLHSGEKPfQCd  954 (1007)
T KOG3623|consen  892 DGMYACDQCDKAFQKQSSLARHKYEHSGQRP-YQCIICKKAFKHKHH---------------L-TEHKRLHSGEKPFQCD  954 (1007)
T ss_pred             cccchHHHHHHHHHhhHHHHHhhhhhcCCCC-cccchhhHhhhhhhh---------------h-hhhhhhccCCCcchhh
Confidence            5689999999999999999999999999998 999999999997777               7 7899999999999999


Q ss_pred             cccCcCcCCCcchhhccccccccccCh
Q psy7450         127 EMLSIKHQGPESAFDLRRNNQAHLNGR  153 (161)
Q Consensus       127 ~c~~~~~~~~~~~f~~~~~l~~H~~~~  153 (161)
                      .|        +|.|.....+.+||+.|
T Consensus       955 KC--------lKRFSHSGSYSQHMNHR  973 (1007)
T KOG3623|consen  955 KC--------LKRFSHSGSYSQHMNHR  973 (1007)
T ss_pred             hh--------hhhcccccchHhhhccc
Confidence            99        99999999999999865

>KOG3608|consensus

Probab=99.47  E-value=5.3e-15  Score=108.44  Aligned_cols=142  Identities=18%  Similarity=0.270  Sum_probs=94.8

Q ss_pred             CCCCCCCCCccccCCCCCcccccccccccccCHHHHHHHHHHhcCC---------------------------CCCeecC
Q psy7450           1 MFSEFNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGK---------------------------EPRYQCP   53 (161)
Q Consensus         1 f~~~~~l~~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~---------------------------~k~~~C~   53 (161)
                      |.+++.|+.|++. |+++|...|+.||..|..+..|..|.+..+.-                           ..-|.|+
T Consensus       189 ~~~k~~LreH~r~-Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn~ykCp  267 (467)
T KOG3608|consen  189 MGNKYRLREHIRT-HSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVNCYKCP  267 (467)
T ss_pred             hccHHHHHHHHHh-cCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhhccccc
Confidence            4567788999999 99998888888887777777777766533221                           2356777


Q ss_pred             CcCCccCchHHHHHHHHhhCCCCCccccCCCCCccccccccCCCcc-------chhh-----hhhhh--hhccc-CCCC-
Q psy7450          54 HCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQGPETL-------SIKH-----QVSEM--LSIKH-QGPE-  117 (161)
Q Consensus        54 ~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~~~~~~~~~~-------~~~~-----~~~~~--l~~~~-~~~~-  117 (161)
                      .|+......++|.+|++.-+.+.+||+|+.|++.|.+.+.+..+..       ...+     .+..+  + ..| ..+| 
T Consensus       268 lCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS~~~y~C~h~~C~~s~r~~~q~-~~H~~evhE  346 (467)
T KOG3608|consen  268 LCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHSKTVYQCEHPDCHYSVRTYTQM-RRHFLEVHE  346 (467)
T ss_pred             ccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhccccceecCCCCCcHHHHHHHHH-HHHHHHhcc
Confidence            7888888888899998876655555999999999987665322111       1111     00000  0 111 1122 


Q ss_pred             -CcCcccCCCcccCcCcCCCcchhhccccccccccC
Q psy7450         118 -TLSIKHQGPEMLSIKHQGPESAFDLRRNNQAHLNG  152 (161)
Q Consensus       118 -~~~~~~~c~~c~~~~~~~~~~~f~~~~~l~~H~~~  152 (161)
                       ..+.+|.|-.|        ++.|+...+|.+|++.
T Consensus       347 g~np~~Y~CH~C--------dr~ft~G~~L~~HL~k  374 (467)
T KOG3608|consen  347 GNNPILYACHCC--------DRFFTSGKSLSAHLMK  374 (467)
T ss_pred             CCCCCceeeecc--------hhhhccchhHHHHHHH
Confidence             23578999999        9999999999999753

>KOG3576|consensus

Probab=99.35  E-value=5.2e-14  Score=96.20  Aligned_cols=84  Identities=23%  Similarity=0.272  Sum_probs=74.2

Q ss_pred             CCCCCccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCC--------
Q psy7450           5 FNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGP--------   76 (161)
Q Consensus         5 ~~l~~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~--------   76 (161)
                      .-|.+|++. |+..+.+.|..||+.|.....|++|.++|+| .+||.|..|+++|.+...|..|.+..+|..        
T Consensus       131 Rmlnrh~kc-h~~vkr~lct~cgkgfndtfdlkrh~rthtg-vrpykc~~c~kaftqrcsleshl~kvhgv~~~yayker  208 (267)
T KOG3576|consen  131 RMLNRHLKC-HSDVKRHLCTFCGKGFNDTFDLKRHTRTHTG-VRPYKCSLCEKAFTQRCSLESHLKKVHGVQHQYAYKER  208 (267)
T ss_pred             HHHHHHhhh-ccHHHHHHHhhccCcccchhhhhhhhccccC-ccccchhhhhHHHHhhccHHHHHHHHcCchHHHHHHHh
Confidence            346789999 9999999999999999999999999999999 999999999999999999999998766531        


Q ss_pred             --CccccCCCCCcccc
Q psy7450          77 --EMLSVKHQGPEMLS   90 (161)
Q Consensus        77 --~~~~C~~C~k~f~~   90 (161)
                        +.|.|..||.+-..
T Consensus       209 r~kl~vcedcg~t~~~  224 (267)
T KOG3576|consen  209 RAKLYVCEDCGYTSER  224 (267)
T ss_pred             hhheeeecccCCCCCC
Confidence              23899999975543

>KOG3608|consensus

Probab=99.27  E-value=3e-13  Score=99.37  Aligned_cols=89  Identities=20%  Similarity=0.345  Sum_probs=76.5

Q ss_pred             CCCCCCCccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCC--cCCccCchHHHHHHHHhhC-CCC-Cc
Q psy7450           3 SEFNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPH--CPYRGKQKVHLKTHVAIKH-QGP-EM   78 (161)
Q Consensus         3 ~~~~l~~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~--C~~~f~~~~~l~~H~r~h~-~~~-~~   78 (161)
                      ..++|.+|++..|+..+||+|+.|++.|...+.|.+|...|.  +..|.|..  |..++.+...+.+|++-++ |.. ++
T Consensus       275 ~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS--~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~  352 (467)
T KOG3608|consen  275 SASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS--KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPIL  352 (467)
T ss_pred             ChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc--ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCc
Confidence            456788998877999999999999999999999999999776  67899987  9999999999999998877 433 35


Q ss_pred             cccCCCCCccccccc
Q psy7450          79 LSVKHQGPEMLSIKH   93 (161)
Q Consensus        79 ~~C~~C~k~f~~~~~   93 (161)
                      |.|-.|++.|.+-.+
T Consensus       353 Y~CH~Cdr~ft~G~~  367 (467)
T KOG3608|consen  353 YACHCCDRFFTSGKS  367 (467)
T ss_pred             eeeecchhhhccchh
Confidence            999999999987655

>PHA02768 hypothetical protein; Provisional

Probab=99.06  E-value=1.4e-10  Score=63.45  Aligned_cols=42  Identities=19%  Similarity=0.309  Sum_probs=36.9

Q ss_pred             CeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCccccccc
Q psy7450          49 RYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKH   93 (161)
Q Consensus        49 ~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~~~~   93 (161)
                      .|.|+.||+.|...++|..|+++|+  ++ |+|..|++.|...+.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~-~kc~~C~k~f~~~s~   46 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TN-LKLSNCKRISLRTGE   46 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--Cc-ccCCcccceecccce
Confidence            4889999999999999999999988  45 999999999986655

>PHA00733 hypothetical protein

Probab=98.92  E-value=4.8e-10  Score=73.20  Aligned_cols=73  Identities=18%  Similarity=0.130  Sum_probs=59.0

Q ss_pred             CCcccccccccccccCHHHHHHH--H---HHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCccccc
Q psy7450          17 LQFRYTCDSCGKVYKLKRSLYRH--R---TLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSI   91 (161)
Q Consensus        17 ~~k~~~C~~C~~~f~~~~~l~~H--~---~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~~   91 (161)
                      .++++.|.+|.+.|.....|..+  .   ..+.+ ++||.|+.|++.|.....|..|++.+  +.+ |.|+.|++.|...
T Consensus        37 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~-~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~-~~C~~CgK~F~~~  112 (128)
T PHA00733         37 EQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKA-VSPYVCPLCLMPFSSSVSLKQHIRYT--EHS-KVCPVCGKEFRNT  112 (128)
T ss_pred             hhhhHHHHHHhhhccChhhhcchHHHHhhcccCC-CCCccCCCCCCcCCCHHHHHHHHhcC--CcC-ccCCCCCCccCCH
Confidence            46789999999988877666554  1   12345 78999999999999999999999976  345 9999999999876


Q ss_pred             cc
Q psy7450          92 KH   93 (161)
Q Consensus        92 ~~   93 (161)
                      ..
T Consensus       113 ~s  114 (128)
T PHA00733        113 DS  114 (128)
T ss_pred             HH
Confidence            65

>PHA00733 hypothetical protein

Probab=98.90  E-value=1.7e-09  Score=70.60  Aligned_cols=63  Identities=24%  Similarity=0.258  Sum_probs=53.2

Q ss_pred             CCCccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCC
Q psy7450           7 LPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQ   74 (161)
Q Consensus         7 l~~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~   74 (161)
                      |..|+..  .+.+||.|+.|++.|.....|..|++.+   ..+|.|..|++.|.....|..|+...++
T Consensus        62 l~~~~~~--~~~kPy~C~~Cgk~Fss~s~L~~H~r~h---~~~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         62 LYKLLTS--KAVSPYVCPLCLMPFSSSVSLKQHIRYT---EHSKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             HHhhccc--CCCCCccCCCCCCcCCCHHHHHHHHhcC---CcCccCCCCCCccCCHHHHHHHHHHhcC
Confidence            4445433  4578999999999999999999999875   3579999999999999999999987665

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.89  E-value=2.3e-09  Score=84.90  Aligned_cols=111  Identities=14%  Similarity=0.249  Sum_probs=80.0

Q ss_pred             CCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCccccccccC
Q psy7450          16 LLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQG   95 (161)
Q Consensus        16 ~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~~~~~~   95 (161)
                      ..+..+.|+.|++.|. ...|..|+..++   +++.|+ ||+.+ ....|..|+.+|.+.++ +.|+.|++.|..-..  
T Consensus       449 el~~H~~C~~Cgk~f~-~s~LekH~~~~H---kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kp-i~C~fC~~~v~~g~~--  519 (567)
T PLN03086        449 EAKNHVHCEKCGQAFQ-QGEMEKHMKVFH---EPLQCP-CGVVL-EKEQMVQHQASTCPLRL-ITCRFCGDMVQAGGS--  519 (567)
T ss_pred             ccccCccCCCCCCccc-hHHHHHHHHhcC---CCccCC-CCCCc-chhHHHhhhhccCCCCc-eeCCCCCCccccCcc--
Confidence            4456689999999996 677999999873   689999 99755 66899999999999888 999999999952211  


Q ss_pred             CCccchhhhhhhhhhcccCCCCCcCcccCCCcccCcCcCCCcchhhcccccccc
Q psy7450          96 PETLSIKHQVSEMLSIKHQGPETLSIKHQGPEMLSIKHQGPESAFDLRRNNQAH  149 (161)
Q Consensus        96 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~c~~c~~~~~~~~~~~f~~~~~l~~H  149 (161)
                        ........+. | ..|.... +.+++.|..|        |+.|..+. +..|
T Consensus       520 --~~d~~d~~s~-L-t~HE~~C-G~rt~~C~~C--------gk~Vrlrd-m~~H  559 (567)
T PLN03086        520 --AMDVRDRLRG-M-SEHESIC-GSRTAPCDSC--------GRSVMLKE-MDIH  559 (567)
T ss_pred             --ccchhhhhhh-H-HHHHHhc-CCcceEcccc--------CCeeeehh-HHHH
Confidence              0000111111 3 3455553 7889999999        99887663 4444

>PHA02768 hypothetical protein; Provisional

Probab=98.88  E-value=1e-09  Score=60.08  Aligned_cols=44  Identities=18%  Similarity=0.417  Sum_probs=39.5

Q ss_pred             ccccccccccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHH
Q psy7450          20 RYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLK   66 (161)
Q Consensus        20 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~   66 (161)
                      -|.|+.||+.|...++|..|+++|+   +++.|..|++.|...+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~---k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN---TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC---CcccCCcccceecccceeE
Confidence            4799999999999999999999986   5789999999999887663

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.81  E-value=3.1e-09  Score=49.89  Aligned_cols=25  Identities=12%  Similarity=0.163  Sum_probs=16.8

Q ss_pred             HHHHHHHhhCCCCCccccCCCCCccc
Q psy7450          64 HLKTHVAIKHQGPEMLSVKHQGPEML   89 (161)
Q Consensus        64 ~l~~H~r~h~~~~~~~~C~~C~k~f~   89 (161)
                      +|.+|+++|++++| |.|+.|+++|.
T Consensus         1 ~l~~H~~~H~~~k~-~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKP-YKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSS-EEESSSSEEES
T ss_pred             CHHHHhhhcCCCCC-CCCCCCcCeeC
Confidence            35667777777666 77777777664

...

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.66  E-value=2.3e-08  Score=46.89  Aligned_cols=26  Identities=35%  Similarity=0.623  Sum_probs=21.5

Q ss_pred             HHHHHHHHhcCCCCCeecCCcCCccCc
Q psy7450          35 SLYRHRTLECGKEPRYQCPHCPYRGKQ   61 (161)
Q Consensus        35 ~l~~H~~~h~~~~k~~~C~~C~~~f~~   61 (161)
                      +|.+|+++|+| ++||.|+.|++.|.+
T Consensus         1 ~l~~H~~~H~~-~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTG-EKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSS-SSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCC-CCCCCCCCCcCeeCc
Confidence            47788888888 888999999888863

...

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.58  E-value=4.1e-08  Score=77.96  Aligned_cols=79  Identities=16%  Similarity=0.235  Sum_probs=65.7

Q ss_pred             CCCCCccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCcCCccC----------chHHHHHHHHhhCC
Q psy7450           5 FNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGK----------QKVHLKTHVAIKHQ   74 (161)
Q Consensus         5 ~~l~~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~----------~~~~l~~H~r~h~~   74 (161)
                      ..|..|+.+ +.  +++.|+ ||+.+ ....|..|+..+.+ .+++.|..|+..+.          ..+.|..|..+. |
T Consensus       466 s~LekH~~~-~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp-~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G  538 (567)
T PLN03086        466 GEMEKHMKV-FH--EPLQCP-CGVVL-EKEQMVQHQASTCP-LRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-G  538 (567)
T ss_pred             HHHHHHHHh-cC--CCccCC-CCCCc-chhHHHhhhhccCC-CCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-C
Confidence            456788888 43  789999 99765 56889999999999 99999999999885          245899999885 7


Q ss_pred             CCCccccCCCCCccccc
Q psy7450          75 GPEMLSVKHQGPEMLSI   91 (161)
Q Consensus        75 ~~~~~~C~~C~k~f~~~   91 (161)
                      .++ +.|..||+.|..+
T Consensus       539 ~rt-~~C~~Cgk~Vrlr  554 (567)
T PLN03086        539 SRT-APCDSCGRSVMLK  554 (567)
T ss_pred             Ccc-eEccccCCeeeeh
Confidence            788 9999999988643

>PHA00616 hypothetical protein

Probab=98.54  E-value=3.5e-08  Score=51.51  Aligned_cols=34  Identities=24%  Similarity=0.382  Sum_probs=25.2

Q ss_pred             CeecCCcCCccCchHHHHHHHHhhCCCCCccccCC
Q psy7450          49 RYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   83 (161)
Q Consensus        49 ~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~   83 (161)
                      ||+|..||+.|...+.|..|++.|+++++ +.|+.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~-~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNK-LTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCc-cceeE
Confidence            56777777777777777777777777776 66654

>KOG3993|consensus

Probab=98.44  E-value=1.3e-07  Score=71.62  Aligned_cols=140  Identities=17%  Similarity=0.244  Sum_probs=88.4

Q ss_pred             CCCCCCccccCCCCCcccccccccccccCHHHHHHHHHHhcCC--------------------------------CCCee
Q psy7450           4 EFNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGK--------------------------------EPRYQ   51 (161)
Q Consensus         4 ~~~l~~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~--------------------------------~k~~~   51 (161)
                      .+.|.+|.-. -...-.|+|.+|+|.|+-..+|..|+++|--.                                +--|.
T Consensus       280 ~F~LAQHrC~-RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi~~  358 (500)
T KOG3993|consen  280 AFALAQHRCP-RIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSSGIFS  358 (500)
T ss_pred             HHHHhhccCC-eeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccCceee
Confidence            3456666533 33445799999999999999999999987421                                12488


Q ss_pred             cCCcCCccCchHHHHHHHHhhCCCCC----------------ccccCCCCCccccccccCCCccchhhh----hhhh---
Q psy7450          52 CPHCPYRGKQKVHLKTHVAIKHQGPE----------------MLSVKHQGPEMLSIKHQGPETLSIKHQ----VSEM---  108 (161)
Q Consensus        52 C~~C~~~f~~~~~l~~H~r~h~~~~~----------------~~~C~~C~k~f~~~~~~~~~~~~~~~~----~~~~---  108 (161)
                      |..|++.|.+...|+.|+.+|+....                .+-|..|+-.+...+..++....+.-.    ...+   
T Consensus       359 C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~a~sael~~pp~~~~  438 (500)
T KOG3993|consen  359 CHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYVAGSAELELPPYDGS  438 (500)
T ss_pred             cHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccceeeeeccccccCCCCCCC
Confidence            99999999999999999888873211                133555555554333322222221111    0000   


Q ss_pred             ------hhcccCCCCCcCcccCCCcccCcCcCCCcchhhccccccccccC
Q psy7450         109 ------LSIKHQGPETLSIKHQGPEMLSIKHQGPESAFDLRRNNQAHLNG  152 (161)
Q Consensus       109 ------l~~~~~~~~~~~~~~~c~~c~~~~~~~~~~~f~~~~~l~~H~~~  152 (161)
                            .+..+.+.-..+..+.|..|        .-+|....+|.+|.+.
T Consensus       439 ppsss~~sgg~~rlg~~~q~f~~ky~--------~atfyss~~ltrhin~  480 (500)
T KOG3993|consen  439 PPSSSGSSGGYGRLGIAEQGFTCKYC--------PATFYSSPGLTRHINK  480 (500)
T ss_pred             CcccCCCCCccccccchhhccccccc--------hHhhhcCcchHhHhhh
Confidence                  01122233334556778888        9999999999998764

>PHA00732 hypothetical protein

Probab=98.35  E-value=4.2e-07  Score=54.20  Aligned_cols=38  Identities=18%  Similarity=0.323  Sum_probs=20.0

Q ss_pred             CeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCccc
Q psy7450          49 RYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEML   89 (161)
Q Consensus        49 ~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~   89 (161)
                      ||.|..|++.|.+.+.|..|++.++.  + +.|+.||+.|.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~--~-~~C~~CgKsF~   38 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT--L-TKCPVCNKSYR   38 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC--C-CccCCCCCEeC
Confidence            35555555555555555555553211  1 45566666555

>PHA00616 hypothetical protein

Probab=98.33  E-value=3e-07  Score=48.00  Aligned_cols=34  Identities=18%  Similarity=0.415  Sum_probs=31.6

Q ss_pred             ccccccccccccCHHHHHHHHHHhcCCCCCeecCC
Q psy7450          20 RYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPH   54 (161)
Q Consensus        20 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~   54 (161)
                      ||+|..||+.|...+.|..|++.++| ++++.|+.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg-~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHK-QNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcC-CCccceeE
Confidence            68999999999999999999999999 99998764

>PHA00732 hypothetical protein

Probab=98.22  E-value=9.8e-07  Score=52.64  Aligned_cols=46  Identities=22%  Similarity=0.384  Sum_probs=38.5

Q ss_pred             ccccccccccccCHHHHHHHHHH-hcCCCCCeecCCcCCccCchHHHHHHHHhh
Q psy7450          20 RYTCDSCGKVYKLKRSLYRHRTL-ECGKEPRYQCPHCPYRGKQKVHLKTHVAIK   72 (161)
Q Consensus        20 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h   72 (161)
                      ||.|+.|++.|.....|..|++. |.+    +.|+.|++.|.   .+..|..+.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~----~~C~~CgKsF~---~l~~H~~~~   47 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL----TKCPVCNKSYR---RLNQHFYSQ   47 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC----CccCCCCCEeC---Chhhhhccc
Confidence            68899999999999999999984 544    58999999998   467787543

>KOG3993|consensus

Probab=98.15  E-value=3.4e-07  Score=69.38  Aligned_cols=113  Identities=19%  Similarity=0.268  Sum_probs=74.9

Q ss_pred             ccccccccccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCccccccccCCCcc
Q psy7450          20 RYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQGPETL   99 (161)
Q Consensus        20 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~~~~~~~~~~   99 (161)
                      .|.|..|...|.....|.+|...--. ..-|.|+.|++.|.-..+|..|.|=|.-....-      ++=......   ..
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV-~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa------~a~~~P~k~---~~  336 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIV-HVEYRCPECDKVFSCPANLASHRRWHKPRPEAA------KAGSPPPKQ---AV  336 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeE-EeeecCCcccccccCchhhhhhhcccCCchhhh------hcCCCChhh---hh
Confidence            49999999999999999999764333 446999999999999999999999775322100      000000000   00


Q ss_pred             chhhhhhhhhhcccCCCCCcCcccCCCcccCcCcCCCcchhhccccccccccCh
Q psy7450         100 SIKHQVSEMLSIKHQGPETLSIKHQGPEMLSIKHQGPESAFDLRRNNQAHLNGR  153 (161)
Q Consensus       100 ~~~~~~~~~l~~~~~~~~~~~~~~~c~~c~~~~~~~~~~~f~~~~~l~~H~~~~  153 (161)
                      .....+.+   ....+....+..|.|..|        +|.|....+|+.|+-++
T Consensus       337 ~~rae~~e---a~rsg~dss~gi~~C~~C--------~KkFrRqAYLrKHqlth  379 (500)
T KOG3993|consen  337 ETRAEVQE---AERSGDDSSSGIFSCHTC--------GKKFRRQAYLRKHQLTH  379 (500)
T ss_pred             hhhhhhhh---ccccCCcccCceeecHHh--------hhhhHHHHHHHHhHHhh
Confidence            00001111   122444456679999999        99999999999996543

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.92  E-value=8.4e-06  Score=36.77  Aligned_cols=22  Identities=36%  Similarity=0.665  Sum_probs=12.4

Q ss_pred             eecCCcCCccCchHHHHHHHHh
Q psy7450          50 YQCPHCPYRGKQKVHLKTHVAI   71 (161)
Q Consensus        50 ~~C~~C~~~f~~~~~l~~H~r~   71 (161)
                      |.|+.|++.|...+.|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            4455555555555555555554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.92  E-value=2.6e-05  Score=43.11  Aligned_cols=52  Identities=29%  Similarity=0.484  Sum_probs=37.4

Q ss_pred             ccccccccccccCHHHHHHHHHH-hcCCCCCeecCCcCCccCchHHHHHHHHhhCC
Q psy7450          20 RYTCDSCGKVYKLKRSLYRHRTL-ECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQ   74 (161)
Q Consensus        20 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~   74 (161)
                      .|.|+.|++. .+...|..|... |....+.+.|++|...+.  .+|..|+..+++
T Consensus         2 ~f~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    2 SFTCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             CcCCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhcC
Confidence            4789999994 456778888654 555345788999987544  488888887653

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.80  E-value=1.8e-05  Score=35.64  Aligned_cols=23  Identities=39%  Similarity=0.769  Sum_probs=21.2

Q ss_pred             cccccccccccCHHHHHHHHHHh
Q psy7450          21 YTCDSCGKVYKLKRSLYRHRTLE   43 (161)
Q Consensus        21 ~~C~~C~~~f~~~~~l~~H~~~h   43 (161)
                      |.|+.|++.|.....|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            68999999999999999999864

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.67  E-value=5e-05  Score=34.24  Aligned_cols=24  Identities=33%  Similarity=0.726  Sum_probs=14.6

Q ss_pred             eecCCcCCccCchHHHHHHHHhhC
Q psy7450          50 YQCPHCPYRGKQKVHLKTHVAIKH   73 (161)
Q Consensus        50 ~~C~~C~~~f~~~~~l~~H~r~h~   73 (161)
                      |.|+.|++.|.+...|..|++.++
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            456677777777777777766553

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.59  E-value=4.5e-05  Score=35.76  Aligned_cols=25  Identities=16%  Similarity=0.317  Sum_probs=15.5

Q ss_pred             CeecCCcCCccCchHHHHHHHHhhC
Q psy7450          49 RYQCPHCPYRGKQKVHLKTHVAIKH   73 (161)
Q Consensus        49 ~~~C~~C~~~f~~~~~l~~H~r~h~   73 (161)
                      ||.|..|++.|.....|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            4566666666666666666665553

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.42  E-value=3.9e-05  Score=56.54  Aligned_cols=24  Identities=33%  Similarity=0.545  Sum_probs=18.5

Q ss_pred             Cccccccc--ccccccCHHHHHHHHH
Q psy7450          18 QFRYTCDS--CGKVYKLKRSLYRHRT   41 (161)
Q Consensus        18 ~k~~~C~~--C~~~f~~~~~l~~H~~   41 (161)
                      +|||.|++  |.+.++....|+.|+.
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~l  372 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHML  372 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhh
Confidence            47888876  8888888888887765

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.40  E-value=9.6e-05  Score=34.59  Aligned_cols=25  Identities=32%  Similarity=0.861  Sum_probs=22.9

Q ss_pred             ccccccccccccCHHHHHHHHHHhc
Q psy7450          20 RYTCDSCGKVYKLKRSLYRHRTLEC   44 (161)
Q Consensus        20 ~~~C~~C~~~f~~~~~l~~H~~~h~   44 (161)
                      ||.|..|++.|.....|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            6899999999999999999998764

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.31  E-value=0.00023  Score=38.14  Aligned_cols=31  Identities=29%  Similarity=0.488  Sum_probs=18.6

Q ss_pred             CCCeecCCcCCccCchHHHHHHHHhhCCCCC
Q psy7450          47 EPRYQCPHCPYRGKQKVHLKTHVAIKHQGPE   77 (161)
Q Consensus        47 ~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~   77 (161)
                      +.|..|++|+..+.+..+|++|+...++.+|
T Consensus        22 ~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   22 EQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             S--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             CCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            6677777777777777777777777776654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.30  E-value=0.00023  Score=44.05  Aligned_cols=24  Identities=25%  Similarity=0.599  Sum_probs=16.2

Q ss_pred             CeecCCcCCccCchHHHHHHHHhh
Q psy7450          49 RYQCPHCPYRGKQKVHLKTHVAIK   72 (161)
Q Consensus        49 ~~~C~~C~~~f~~~~~l~~H~r~h   72 (161)
                      .+.|..|++.|.....|..|++.+
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             CCCCCccCCCCcCHHHHHHHHcCc
Confidence            467777777777777777777654

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.27  E-value=0.00027  Score=31.74  Aligned_cols=23  Identities=30%  Similarity=0.728  Sum_probs=19.4

Q ss_pred             cccccccccccCHHHHHHHHHHh
Q psy7450          21 YTCDSCGKVYKLKRSLYRHRTLE   43 (161)
Q Consensus        21 ~~C~~C~~~f~~~~~l~~H~~~h   43 (161)
                      |.|+.|++.|.....|..|+..+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            68999999999999999999876

...

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.24  E-value=0.00064  Score=36.45  Aligned_cols=41  Identities=22%  Similarity=0.282  Sum_probs=26.2

Q ss_pred             CCccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCC
Q psy7450           8 PPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPR   49 (161)
Q Consensus         8 ~~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~   49 (161)
                      ..+.+.+...+.|-.|++|+..+....+|.+|+.+.++ .+|
T Consensus        12 ~~~~k~~~~S~~PatCP~C~a~~~~srnLrRHle~~H~-~k~   52 (54)
T PF09237_consen   12 TKKPKSKSQSEQPATCPICGAVIRQSRNLRRHLEIRHF-KKP   52 (54)
T ss_dssp             ----CCCCTTS--EE-TTT--EESSHHHHHHHHHHHTT-TS-
T ss_pred             hhHHHHhhccCCCCCCCcchhhccchhhHHHHHHHHhc-ccC
Confidence            44455545667899999999999999999999988877 654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PRK04860 hypothetical protein; Provisional

Probab=97.04  E-value=0.00056  Score=46.39  Aligned_cols=39  Identities=13%  Similarity=0.350  Sum_probs=33.3

Q ss_pred             CCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCccccc
Q psy7450          48 PRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSI   91 (161)
Q Consensus        48 k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~~   91 (161)
                      -+|.|. |+.   ....+.+|.+++.++++ |.|..|+..|...
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~-YrC~~C~~~l~~~  156 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAV-YRCRRCGETLVFK  156 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCcc-EECCCCCceeEEe
Confidence            368997 987   67778999999999998 9999999988754

>smart00355 ZnF_C2H2 zinc finger

Probab=96.96  E-value=0.00094  Score=30.32  Aligned_cols=22  Identities=36%  Similarity=0.614  Sum_probs=12.0

Q ss_pred             ecCCcCCccCchHHHHHHHHhh
Q psy7450          51 QCPHCPYRGKQKVHLKTHVAIK   72 (161)
Q Consensus        51 ~C~~C~~~f~~~~~l~~H~r~h   72 (161)
                      .|..|++.|.....|..|++.|
T Consensus         2 ~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        2 RCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCcchhCCHHHHHHHHHHh
Confidence            4555555555555555555543

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=96.74  E-value=0.0022  Score=35.30  Aligned_cols=39  Identities=18%  Similarity=0.359  Sum_probs=29.8

Q ss_pred             CeecCCcCCccCchHHHHHHHHhhC-CCCCccccCCCCCcc
Q psy7450          49 RYQCPHCPYRGKQKVHLKTHVAIKH-QGPEMLSVKHQGPEM   88 (161)
Q Consensus        49 ~~~C~~C~~~f~~~~~l~~H~r~h~-~~~~~~~C~~C~k~f   88 (161)
                      .|.|+.|++ ......|..|....+ .+...+.|++|...+
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~   41 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRV   41 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhh
Confidence            489999999 555678999987755 433449999998744

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>smart00355 ZnF_C2H2 zinc finger

Probab=96.73  E-value=0.0017  Score=29.40  Aligned_cols=24  Identities=42%  Similarity=0.818  Sum_probs=21.5

Q ss_pred             cccccccccccCHHHHHHHHHHhc
Q psy7450          21 YTCDSCGKVYKLKRSLYRHRTLEC   44 (161)
Q Consensus        21 ~~C~~C~~~f~~~~~l~~H~~~h~   44 (161)
                      |.|..|++.|.....|..|+..|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            579999999999999999998664

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=96.72  E-value=0.0016  Score=48.31  Aligned_cols=31  Identities=3%  Similarity=-0.150  Sum_probs=25.7

Q ss_pred             cCCCCCcCcccCCCcccCcCcCCCcchhhcccccccccc
Q psy7450         113 HQGPETLSIKHQGPEMLSIKHQGPESAFDLRRNNQAHLN  151 (161)
Q Consensus       113 ~~~~~~~~~~~~c~~c~~~~~~~~~~~f~~~~~l~~H~~  151 (161)
                      ++.-...++||.|+.|        +|.|+....|.-|+.
T Consensus       389 ~~~F~~~~KPYrCevC--------~KRYKNlNGLKYHr~  419 (423)
T COG5189         389 MNIFSAKDKPYRCEVC--------DKRYKNLNGLKYHRK  419 (423)
T ss_pred             cccccccCCceecccc--------chhhccCccceeccc
Confidence            3333456899999999        999999999999975

>PRK04860 hypothetical protein; Provisional

Probab=96.65  E-value=0.0011  Score=45.01  Aligned_cols=40  Identities=30%  Similarity=0.600  Sum_probs=34.0

Q ss_pred             cccccccccccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchH
Q psy7450          19 FRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKV   63 (161)
Q Consensus        19 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~   63 (161)
                      -+|.|. |+.   ....+.+|.+++++ +++|.|..|+..|....
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g-~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRG-EAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcC-CccEECCCCCceeEEec
Confidence            469998 987   56678999999999 99999999999886543

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=96.64  E-value=0.0002  Score=44.31  Aligned_cols=23  Identities=22%  Similarity=0.345  Sum_probs=16.7

Q ss_pred             ccCCCcccCcCcCCCcchhhccccccccccC
Q psy7450         122 KHQGPEMLSIKHQGPESAFDLRRNNQAHLNG  152 (161)
Q Consensus       122 ~~~c~~c~~~~~~~~~~~f~~~~~l~~H~~~  152 (161)
                      .+.|..|        ++.|.....|..|+++
T Consensus        50 ~~~C~~C--------~~~f~s~~~l~~Hm~~   72 (100)
T PF12756_consen   50 SFRCPYC--------NKTFRSREALQEHMRS   72 (100)
T ss_dssp             SEEBSSS--------S-EESSHHHHHHHHHH
T ss_pred             CCCCCcc--------CCCCcCHHHHHHHHcC
Confidence            5777777        8888888888888764

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.37  E-value=0.0036  Score=28.23  Aligned_cols=23  Identities=48%  Similarity=1.084  Sum_probs=13.1

Q ss_pred             eecCCcCCccCchHHHHHHHHhhC
Q psy7450          50 YQCPHCPYRGKQKVHLKTHVAIKH   73 (161)
Q Consensus        50 ~~C~~C~~~f~~~~~l~~H~r~h~   73 (161)
                      |.|+.|+.... ...|..|++.++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            45666666665 666666666654

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.28  E-value=0.003  Score=28.73  Aligned_cols=22  Identities=18%  Similarity=0.400  Sum_probs=12.6

Q ss_pred             eecCCcCCccCchHHHHHHHHh
Q psy7450          50 YQCPHCPYRGKQKVHLKTHVAI   71 (161)
Q Consensus        50 ~~C~~C~~~f~~~~~l~~H~r~   71 (161)
                      |.|..|+..|.+...+..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            3455666666666666655543

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.27  E-value=0.00044  Score=31.63  Aligned_cols=24  Identities=17%  Similarity=0.223  Sum_probs=21.7

Q ss_pred             cCCCcccCcCcCCCcchhhccccccccccChh
Q psy7450         123 HQGPEMLSIKHQGPESAFDLRRNNQAHLNGRK  154 (161)
Q Consensus       123 ~~c~~c~~~~~~~~~~~f~~~~~l~~H~~~~~  154 (161)
                      |.|+.|        ++.|.....|+.|++|++
T Consensus         1 ~~C~~C--------~~~f~s~~~~~~H~~s~~   24 (25)
T PF12874_consen    1 FYCDIC--------NKSFSSENSLRQHLRSKK   24 (25)
T ss_dssp             EEETTT--------TEEESSHHHHHHHHTTHH
T ss_pred             CCCCCC--------CCCcCCHHHHHHHHCcCC
Confidence            468888        999999999999999976

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.00  E-value=0.0021  Score=29.97  Aligned_cols=24  Identities=13%  Similarity=0.227  Sum_probs=21.8

Q ss_pred             cCCCcccCcCcCCCcchhhccccccccccChh
Q psy7450         123 HQGPEMLSIKHQGPESAFDLRRNNQAHLNGRK  154 (161)
Q Consensus       123 ~~c~~c~~~~~~~~~~~f~~~~~l~~H~~~~~  154 (161)
                      |.|..|        ++.|.....++.|+++.+
T Consensus         2 ~~C~~C--------~k~f~~~~~~~~H~~sk~   25 (27)
T PF12171_consen    2 FYCDAC--------DKYFSSENQLKQHMKSKK   25 (27)
T ss_dssp             CBBTTT--------TBBBSSHHHHHCCTTSHH
T ss_pred             CCcccC--------CCCcCCHHHHHHHHccCC
Confidence            678899        999999999999999865

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=95.29  E-value=0.018  Score=25.87  Aligned_cols=23  Identities=30%  Similarity=0.534  Sum_probs=18.0

Q ss_pred             cccccccccccCHHHHHHHHHHhc
Q psy7450          21 YTCDSCGKVYKLKRSLYRHRTLEC   44 (161)
Q Consensus        21 ~~C~~C~~~f~~~~~l~~H~~~h~   44 (161)
                      |.|+.|+.... ...|..|++.+.
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            68999998887 889999998764

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=94.83  E-value=0.0074  Score=28.07  Aligned_cols=21  Identities=24%  Similarity=0.477  Sum_probs=11.4

Q ss_pred             eecCCcCCccCchHHHHHHHH
Q psy7450          50 YQCPHCPYRGKQKVHLKTHVA   70 (161)
Q Consensus        50 ~~C~~C~~~f~~~~~l~~H~r   70 (161)
                      |.|..|++.|.+...+..|++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            445555555555555555543

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=94.27  E-value=0.048  Score=24.88  Aligned_cols=19  Identities=26%  Similarity=0.511  Sum_probs=10.5

Q ss_pred             ecCCcCCccCchHHHHHHHH
Q psy7450          51 QCPHCPYRGKQKVHLKTHVA   70 (161)
Q Consensus        51 ~C~~C~~~f~~~~~l~~H~r   70 (161)
                      .|+.||+.| ..+.|..|+.
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHH
Confidence            456666666 4445555544

>smart00451 ZnF_U1 U1-like zinc finger

Probab=93.29  E-value=0.083  Score=25.85  Aligned_cols=22  Identities=14%  Similarity=0.480  Sum_probs=14.9

Q ss_pred             CeecCCcCCccCchHHHHHHHH
Q psy7450          49 RYQCPHCPYRGKQKVHLKTHVA   70 (161)
Q Consensus        49 ~~~C~~C~~~f~~~~~l~~H~r   70 (161)
                      +|.|..|+..|.....+..|+.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            4667777777776666666654

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=93.17  E-value=0.023  Score=27.97  Aligned_cols=27  Identities=22%  Similarity=0.217  Sum_probs=23.6

Q ss_pred             ccCCCcccCcCcCCCcchhhccccccccccChhhh
Q psy7450         122 KHQGPEMLSIKHQGPESAFDLRRNNQAHLNGRKDM  156 (161)
Q Consensus       122 ~~~c~~c~~~~~~~~~~~f~~~~~l~~H~~~~~~~  156 (161)
                      +|.|..|        ++.|.....+..|++|++..
T Consensus         3 ~~~C~~C--------~~~~~~~~~~~~H~~gk~H~   29 (35)
T smart00451        3 GFYCKLC--------NVTFTDEISVEAHLKGKKHK   29 (35)
T ss_pred             CeEcccc--------CCccCCHHHHHHHHChHHHH
Confidence            5789999        99999999999999986654

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=92.03  E-value=0.12  Score=25.19  Aligned_cols=24  Identities=25%  Similarity=0.436  Sum_probs=13.7

Q ss_pred             eecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCC
Q psy7450          50 YQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGP   86 (161)
Q Consensus        50 ~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k   86 (161)
                      |.|..||..+....             +++.|+.||.
T Consensus         2 ~~C~~CGy~y~~~~-------------~~~~CP~Cg~   25 (33)
T cd00350           2 YVCPVCGYIYDGEE-------------APWVCPVCGA   25 (33)
T ss_pred             EECCCCCCEECCCc-------------CCCcCcCCCC
Confidence            56777776543321             3377777764

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>KOG1146|consensus

Probab=91.60  E-value=0.14  Score=45.03  Aligned_cols=67  Identities=22%  Similarity=0.348  Sum_probs=45.3

Q ss_pred             CCCCCccccCCCCCcccccccccccccCHHHHHHHHHHhcCC------------------------CCCeecCCcCCccC
Q psy7450           5 FNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGK------------------------EPRYQCPHCPYRGK   60 (161)
Q Consensus         5 ~~l~~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~------------------------~k~~~C~~C~~~f~   60 (161)
                      ..+..++.+.++..+.+.|..|+..|+....|..|+++-+.+                        .++|.|..|..++.
T Consensus       450 r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~stt  529 (1406)
T KOG1146|consen  450 RSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACNYSTT  529 (1406)
T ss_pred             cccccceeeeecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeeeeeee
Confidence            344455555467778888888888888888888888762210                        34666777777777


Q ss_pred             chHHHHHHHHh
Q psy7450          61 QKVHLKTHVAI   71 (161)
Q Consensus        61 ~~~~l~~H~r~   71 (161)
                      ...+|.+|+..
T Consensus       530 tng~LsihlqS  540 (1406)
T KOG1146|consen  530 TNGNLSIHLQS  540 (1406)
T ss_pred             cchHHHHHHHH
Confidence            76677776654

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=91.03  E-value=0.044  Score=42.32  Aligned_cols=62  Identities=21%  Similarity=0.353  Sum_probs=55.2

Q ss_pred             cccccccccccccCHHHHHHHHH--HhcCCC--CCeecC--CcCCccCchHHHHHHHHhhCCCCCccccC
Q psy7450          19 FRYTCDSCGKVYKLKRSLYRHRT--LECGKE--PRYQCP--HCPYRGKQKVHLKTHVAIKHQGPEMLSVK   82 (161)
Q Consensus        19 k~~~C~~C~~~f~~~~~l~~H~~--~h~~~~--k~~~C~--~C~~~f~~~~~l~~H~r~h~~~~~~~~C~   82 (161)
                      .++.|..|...|.....|..|..  .|.+ +  +++.|+  .|++.|.+...+..|...|.+..+ +.+.
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  355 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSG-ESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISP-AKEK  355 (467)
T ss_pred             cCCCCccccCCcccccccccccccccccc-ccCCceeeeccCCCccccccccccCCcccccCCCc-cccc
Confidence            46889999999999999999999  7999 8  999999  799999999999999999998776 5554

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=90.34  E-value=0.25  Score=24.34  Aligned_cols=25  Identities=20%  Similarity=0.363  Sum_probs=15.5

Q ss_pred             CeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCC
Q psy7450          49 RYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGP   86 (161)
Q Consensus        49 ~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k   86 (161)
                      .|.|..||..+..             +.+|..|+.||.
T Consensus         2 ~~~C~~CG~i~~g-------------~~~p~~CP~Cg~   26 (34)
T cd00729           2 VWVCPVCGYIHEG-------------EEAPEKCPICGA   26 (34)
T ss_pred             eEECCCCCCEeEC-------------CcCCCcCcCCCC
Confidence            3678888765332             223478888874

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=90.09  E-value=0.28  Score=37.83  Aligned_cols=52  Identities=19%  Similarity=0.222  Sum_probs=44.1

Q ss_pred             CCCCCCCCCccc--cCCCCC--cccccc--cccccccCHHHHHHHHHHhcCCCCCeecCC
Q psy7450           1 MFSEFNLPPHTL--FNPLLQ--FRYTCD--SCGKVYKLKRSLYRHRTLECGKEPRYQCPH   54 (161)
Q Consensus         1 f~~~~~l~~H~~--~~h~~~--k~~~C~--~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~   54 (161)
                      |.....|..|..  . |+++  +++.|.  .|++.|.....+..|...+.+ ..++.+..
T Consensus       299 ~s~~~~l~~~~~~~~-h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  356 (467)
T COG5048         299 FSRSSPLTRHLRSVN-HSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTS-ISPAKEKL  356 (467)
T ss_pred             ccccccccccccccc-cccccCCceeeeccCCCccccccccccCCcccccC-CCcccccc
Confidence            456677889988  7 9999  999999  799999999999999999998 77666643

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=88.25  E-value=0.46  Score=23.80  Aligned_cols=32  Identities=19%  Similarity=0.386  Sum_probs=15.4

Q ss_pred             ecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCcc
Q psy7450          51 QCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEM   88 (161)
Q Consensus        51 ~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f   88 (161)
                      .|+.|+..|.-..+-     +-.+... ..|+.|+..|
T Consensus         4 ~CP~C~~~f~v~~~~-----l~~~~~~-vrC~~C~~~f   35 (37)
T PF13719_consen    4 TCPNCQTRFRVPDDK-----LPAGGRK-VRCPKCGHVF   35 (37)
T ss_pred             ECCCCCceEEcCHHH-----cccCCcE-EECCCCCcEe
Confidence            456666555554431     1122233 5666666555

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=87.61  E-value=0.52  Score=23.56  Aligned_cols=34  Identities=18%  Similarity=0.246  Sum_probs=17.1

Q ss_pred             eecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCccc
Q psy7450          50 YQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEML   89 (161)
Q Consensus        50 ~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~   89 (161)
                      +.|+.|+..|.-.....     ...... ..|+.|+..|.
T Consensus         3 ~~CP~C~~~~~v~~~~~-----~~~~~~-v~C~~C~~~~~   36 (38)
T TIGR02098         3 IQCPNCKTSFRVVDSQL-----GANGGK-VRCGKCGHVWY   36 (38)
T ss_pred             EECCCCCCEEEeCHHHc-----CCCCCE-EECCCCCCEEE
Confidence            45666666665554321     111122 56777766553

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=87.20  E-value=0.49  Score=32.31  Aligned_cols=24  Identities=21%  Similarity=0.408  Sum_probs=18.9

Q ss_pred             CCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCC
Q psy7450          48 PRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQG   85 (161)
Q Consensus        48 k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~   85 (161)
                      +-|.|++||..             +-+ .+|-.||+||
T Consensus       133 ~~~vC~vCGy~-------------~~g-e~P~~CPiCg  156 (166)
T COG1592         133 KVWVCPVCGYT-------------HEG-EAPEVCPICG  156 (166)
T ss_pred             CEEEcCCCCCc-------------ccC-CCCCcCCCCC
Confidence            36999999974             456 4559999998

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=87.08  E-value=0.63  Score=23.18  Aligned_cols=32  Identities=19%  Similarity=0.408  Sum_probs=15.5

Q ss_pred             ecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCcc
Q psy7450          51 QCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEM   88 (161)
Q Consensus        51 ~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f   88 (161)
                      .|+.|+..|.-.+..     +-..... .+|+.|+..|
T Consensus         4 ~Cp~C~~~y~i~d~~-----ip~~g~~-v~C~~C~~~f   35 (36)
T PF13717_consen    4 TCPNCQAKYEIDDEK-----IPPKGRK-VRCSKCGHVF   35 (36)
T ss_pred             ECCCCCCEEeCCHHH-----CCCCCcE-EECCCCCCEe
Confidence            455666555555432     1122223 5666666554

>KOG2893|consensus

Probab=86.63  E-value=0.43  Score=34.40  Aligned_cols=33  Identities=18%  Similarity=0.239  Sum_probs=16.0

Q ss_pred             cCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCccc
Q psy7450          52 CPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEML   89 (161)
Q Consensus        52 C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~   89 (161)
                      |=.|++-|.....|.+|++.-+     |+|.+|-|...
T Consensus        13 cwycnrefddekiliqhqkakh-----fkchichkkl~   45 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKAKH-----FKCHICHKKLF   45 (341)
T ss_pred             eeecccccchhhhhhhhhhhcc-----ceeeeehhhhc
Confidence            3345555555555555554322     55555554433

>KOG2186|consensus

Probab=85.88  E-value=0.42  Score=34.69  Aligned_cols=53  Identities=21%  Similarity=0.436  Sum_probs=38.4

Q ss_pred             cccccccccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCC
Q psy7450          21 YTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPE   77 (161)
Q Consensus        21 ~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~   77 (161)
                      |.|.+||....-+ .+.+|+..-++  .-|.|..|++.|.. .++..|..--+...+
T Consensus         4 FtCnvCgEsvKKp-~vekH~srCrn--~~fSCIDC~k~F~~-~sYknH~kCITEaQK   56 (276)
T KOG2186|consen    4 FTCNVCGESVKKP-QVEKHMSRCRN--AYFSCIDCGKTFER-VSYKNHTKCITEAQK   56 (276)
T ss_pred             Eehhhhhhhcccc-chHHHHHhccC--CeeEEeeccccccc-chhhhhhhhcchHHH
Confidence            6899999887654 47778877666  45899999999988 456677665554333

>KOG2231|consensus

Probab=84.30  E-value=0.94  Score=37.63  Aligned_cols=103  Identities=14%  Similarity=0.075  Sum_probs=57.5

Q ss_pred             cCHHHHHHHHHHhcCCCCCeecCCcCC---cc------CchHHHHHHHHhhCC-CCC---ccccCCCCCccccccccCCC
Q psy7450          31 KLKRSLYRHRTLECGKEPRYQCPHCPY---RG------KQKVHLKTHVAIKHQ-GPE---MLSVKHQGPEMLSIKHQGPE   97 (161)
Q Consensus        31 ~~~~~l~~H~~~h~~~~k~~~C~~C~~---~f------~~~~~l~~H~r~h~~-~~~---~~~C~~C~k~f~~~~~~~~~   97 (161)
                      .+...|..|+...+.   .+.|..|-.   .|      -....|..|+..-.. ++.   --.|..|...|.....    
T Consensus       125 ~s~~~Lk~H~~~~H~---~~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d~~s~rGhp~C~~C~~~fld~~e----  197 (669)
T KOG2231|consen  125 KSVENLKNHMRDQHK---LHLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPDDESCRGHPLCKFCHERFLDDDE----  197 (669)
T ss_pred             hHHHHHHHHHHHhhh---hhccccccccceeeeeeeehehHHHHHHHHhcCCCccccccCCccchhhhhhhccHHH----
Confidence            366778888854332   244444432   12      124556666654322 111   0246677777764443    


Q ss_pred             ccchhhhhhhhhhcccCCCCCcCcccCCCcccCcCcCCCcchhhccccccccccChhhhhh
Q psy7450          98 TLSIKHQVSEMLSIKHQGPETLSIKHQGPEMLSIKHQGPESAFDLRRNNQAHLNGRKDMME  158 (161)
Q Consensus        98 ~~~~~~~~~~~l~~~~~~~~~~~~~~~c~~c~~~~~~~~~~~f~~~~~l~~H~~~~~~~~~  158 (161)
                                 + ..|++.    ..+.|..| +. ..+.+..|..-.+|..|-|..+.++|
T Consensus       198 -----------l-~rH~~~----~h~~chfC-~~-~~~~neyy~~~~dLe~HfR~~HflCE  240 (669)
T KOG2231|consen  198 -----------L-YRHLRF----DHEFCHFC-DY-KTGQNEYYNDYDDLEEHFRKGHFLCE  240 (669)
T ss_pred             -----------H-HHhhcc----ceeheeec-Cc-ccccchhcccchHHHHHhhhcCcccc
Confidence                       3 334432    23555555 22 45557788888999999888887776

>KOG1146|consensus

Probab=83.60  E-value=0.26  Score=43.49  Aligned_cols=104  Identities=18%  Similarity=0.140  Sum_probs=62.3

Q ss_pred             ccccccCHHHHHHHHH-HhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCccccccccCCCccchhhh
Q psy7450          26 CGKVYKLKRSLYRHRT-LECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQGPETLSIKHQ  104 (161)
Q Consensus        26 C~~~f~~~~~l~~H~~-~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~~~~~~~~~~~~~~~  104 (161)
                      |+..+.+...+..++. .+.- .+.+.|+.|+..|.....|..|+|..+-+-. -  .+|- .+..  +  .        
T Consensus       442 ~e~~~~s~r~~~~~t~~L~S~-~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~-~--~~c~-~gq~--~--~--------  504 (1406)
T KOG1146|consen  442 AEPLLESKRSLEGQTVVLHSF-FKTLKCPKCNWHYKLAQTLGVHMRSKHPESQ-S--AYCK-AGQN--H--P--------  504 (1406)
T ss_pred             hhhhhhhhcccccceeeeecc-cccccCCccchhhhhHHHhhhcccccccccc-h--hHhH-hccc--c--c--------
Confidence            3333433333433333 2333 6788999999999999999999998554433 1  2221 1110  0  0        


Q ss_pred             hhhhhhcccCCCCCcCcccCCCcccCcCcCCCcchhhccccccccccChhhhhh
Q psy7450         105 VSEMLSIKHQGPETLSIKHQGPEMLSIKHQGPESAFDLRRNNQAHLNGRKDMME  158 (161)
Q Consensus       105 ~~~~l~~~~~~~~~~~~~~~c~~c~~~~~~~~~~~f~~~~~l~~H~~~~~~~~~  158 (161)
                          ...+...-...-++|.|..|        ..++....+|..|+.+-++.+|
T Consensus       505 ----~~arg~~~~~~~~p~~C~~C--------~~stttng~LsihlqS~~h~~~  546 (1406)
T KOG1146|consen  505 ----RLARGEVYRCPGKPYPCRAC--------NYSTTTNGNLSIHLQSDLHRNE  546 (1406)
T ss_pred             ----cccccccccCCCCcccceee--------eeeeecchHHHHHHHHHhhHHH
Confidence                00111122234568999999        9999999999999976544443

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=83.47  E-value=0.21  Score=35.63  Aligned_cols=13  Identities=15%  Similarity=0.095  Sum_probs=10.5

Q ss_pred             cccCCCCCccccc
Q psy7450          79 LSVKHQGPEMLSI   91 (161)
Q Consensus        79 ~~C~~C~k~f~~~   91 (161)
                      ..|+.||-+|...
T Consensus        49 ~vCP~CgyA~~~~   61 (214)
T PF09986_consen   49 WVCPHCGYAAFEE   61 (214)
T ss_pred             EECCCCCCccccc
Confidence            5799999988754

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=82.50  E-value=0.72  Score=25.30  Aligned_cols=23  Identities=22%  Similarity=0.470  Sum_probs=10.9

Q ss_pred             CCeecCCcCCccCchHHHHHHHH
Q psy7450          48 PRYQCPHCPYRGKQKVHLKTHVA   70 (161)
Q Consensus        48 k~~~C~~C~~~f~~~~~l~~H~r   70 (161)
                      .-+.|+.||..|....++.+|..
T Consensus        16 ~~lrCPRC~~~FR~~K~Y~RHVN   38 (65)
T COG4049          16 EFLRCPRCGMVFRRRKDYIRHVN   38 (65)
T ss_pred             eeeeCCchhHHHHHhHHHHHHhh
Confidence            33445555555554444444443

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=82.34  E-value=2.3  Score=28.88  Aligned_cols=34  Identities=12%  Similarity=0.142  Sum_probs=27.3

Q ss_pred             CCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCcccc
Q psy7450          47 EPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLS   90 (161)
Q Consensus        47 ~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~   90 (161)
                      ..-|.|+.|+..|+...++.         .- |.|+.||.....
T Consensus       107 ~~~Y~Cp~c~~r~tf~eA~~---------~~-F~Cp~Cg~~L~~  140 (158)
T TIGR00373       107 NMFFICPNMCVRFTFNEAME---------LN-FTCPRCGAMLDY  140 (158)
T ss_pred             CCeEECCCCCcEeeHHHHHH---------cC-CcCCCCCCEeee
Confidence            46689999999999888875         13 999999987653

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=82.31  E-value=0.98  Score=28.62  Aligned_cols=16  Identities=19%  Similarity=0.432  Sum_probs=8.3

Q ss_pred             CCCeecCCcCCccCch
Q psy7450          47 EPRYQCPHCPYRGKQK   62 (161)
Q Consensus        47 ~k~~~C~~C~~~f~~~   62 (161)
                      ..|..|+.||..|...
T Consensus        24 k~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   24 KDPIVCPKCGTEFPPE   39 (108)
T ss_pred             CCCccCCCCCCccCcc
Confidence            3455555555555443

The function of members of this family is unknown.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	161
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	6e-07
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-05
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	3e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	3e-05
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-04

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 43.9 bits (104), Expect = 6e-07
 Identities = 14/69 (20%), Positives = 24/69 (34%), Gaps = 4/69 (5%)

Query: 21 YTCDSCGKVYKLKRSLYRHR---TLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPE 77
            C+ CG   + K SL  H+            + C  C  R ++   +  H +  H    
Sbjct: 8  LQCEICGFTCRQKASLNWHQRKHAETVAALR-FPCEFCGKRFEKPDSVAAHRSKSHPALL 66

Query: 78 MLSVKHQGP 86
          +   +  GP
Sbjct: 67 LAPQESSGP 75

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 14/55 (25%), Positives = 22/55 (40%), Gaps = 2/55 (3%)

Query: 21 YTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQG 75
            C  C      K +L  H  + C   P ++C +C +  KQ  +L  H+     G
Sbjct: 10 EKCSECSYSCSSKAALRIHERIHCTDRP-FKCNYCSFDTKQPSNLSKHMKK-FHG 62

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 39.5 bits (93), Expect = 3e-05
 Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 1/55 (1%)

Query: 21 YTCDSCGKVYKLKRSLYRH-RTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQ 74
          Y C  C +VY    +  RH  T        Y CP C     +K ++  HV I H+
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 38.9 bits (90), Expect = 3e-05
 Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 1/52 (1%)

Query: 20 RYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAI 71
          +Y C+ CG   K    L +H        P Y C +C +  K K +L  H+  
Sbjct: 1  KYICEECGIRXKKPSMLKKHIRTHTDVRP-YHCTYCNFSFKTKGNLTKHMKS 51

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 37.5 bits (88), Expect = 1e-04
 Identities = 13/58 (22%), Positives = 21/58 (36%), Gaps = 5/58 (8%)

Query: 21 YTCDSCGKVYKLKRSLYRHR---TLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQG 75
          Y C  C   +    ++  H      E     ++ CPHC     +K  L  H+  +H  
Sbjct: 16 YECYICHARFTQSGTMKMHILQKHTENVA--KFHCPHCDTVIARKSDLGVHLRKQHSY 71

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	161
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.93
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.92
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.92
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.91
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.91
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.9
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.9
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.89
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.87
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.86
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.85
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.83
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.83
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.82
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.82
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.82
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.82
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.81
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.81
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.81
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.8
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.8
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.8
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.79
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.78
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.77
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.76
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.75
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.74
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.72
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.71
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.71
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.71
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.7
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.7
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.69
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.69
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.68
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.68
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.68
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.68
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.68
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.67
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.66
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.65
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.65
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.63
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.62
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.62
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.61
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.61
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.6
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.6
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.59
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.59
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.59
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.59
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.57
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.56
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.56
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.55
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.55
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.54
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.53
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.5
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.5
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.48
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.48
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.47
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.44
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.43
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.42
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.42
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.42
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.41
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.39
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.38
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.37
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.37
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.37
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.37
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.37
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.37
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.37
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.37
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.37
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.36
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.36
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.36
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.36
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.36
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.36
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.36
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.36
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.36
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.36
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.36
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.36
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.36
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.35
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.35
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.35
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.35
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.35
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.35
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.35
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.35
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.35
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.35
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.35
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.34
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.34
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.34
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.34
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.34
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.34
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.34
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.34
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.34
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.34
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.34
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.33
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.33
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.33
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.33
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.33
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.33
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.33
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.33
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.33
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.32
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.32
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.32
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.32
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.32
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.32
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.32
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.32
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.32
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.32
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.32
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.32
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.32
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.32
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.32
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.32
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.32
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.32
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.32
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.32
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.32
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.32
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.32
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.31
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.31
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.31
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.31
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.31
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.31
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.31
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.31
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.31
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.31
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.3
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.3
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.3
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.3
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.3
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.3
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.3
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.3
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.29
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.28
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.28
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.28
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.27
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.27
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.26
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.26
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.26
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.26
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.26
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.26
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.26
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.25
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.25
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.25
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.25
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.24
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.24
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.24
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.24
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.24
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.24
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.24
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.23
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.23
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.23
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.23
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.23
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.23
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.22
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.22
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.22
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.22
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.22
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.22
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.22
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.21
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.21
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.21
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.21
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.2
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.2
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.2
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.2
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.2
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.2
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.2
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.2
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.19
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.19
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.19
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.19
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.19
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.19
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.19
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.19
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.19
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.19
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.18
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.18
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.18
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.18
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.18
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.18
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.17
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.17
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.17
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.17
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.17
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.17
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.17
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.17
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.17
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.16
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.16
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.16
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.15
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.14
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.14
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.13
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.13
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.13
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.13
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.13
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.13
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.13
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.12
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.12
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.12
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.12
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.11
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.11
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.11
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.1
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.1
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.1
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.07
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.07
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.06
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	99.05
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.05
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.04
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.94
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.92
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.89
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.89
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.87
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.86
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.84
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.83
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.82
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.82
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.81
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.79
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.79
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.79
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.75
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.7
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.69
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.68
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.67
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.67
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.67
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.67
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.66
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.65
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.64
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.64
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.63
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.63
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.63
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.63
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.62
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.6
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.59
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.59
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.58
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.55
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.54
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.51
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.5
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.5
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.49
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.49
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.49
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.48
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.47
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.47
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.44
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.42
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.42
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.42
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.41
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.41
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.4
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.39
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.35
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.34
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.67
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.32
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.32
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.31
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.65
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.3
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.29
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.28
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.27
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.26
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.25
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.24
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.23
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.22
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.21
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.21
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.46
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.45
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.45
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.13
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.08
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.05
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.27
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.93
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.53
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	97.0
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.67
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.3
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.89
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.83
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	93.58
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	93.41
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	91.7
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	90.22
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	90.11
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	88.86
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	88.67
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	85.32
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	82.71
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	82.55

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.93  E-value=4.4e-28  Score=168.00  Aligned_cols=142  Identities=22%  Similarity=0.331  Sum_probs=92.9

Q ss_pred             CCCCCCCCCccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccc
Q psy7450           1 MFSEFNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLS   80 (161)
Q Consensus         1 f~~~~~l~~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~   80 (161)
                      |.+...|..|+.+ |.++++|.|+.|++.|.....|..|+..|.+ +++|.|..|++.|.....|..|+++|+++++ |.
T Consensus        31 f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~  107 (190)
T 2i13_A           31 FSRSDHLAEHQRT-HTGEKPYKCPECGKSFSDKKDLTRHQRTHTG-EKPYKCPECGKSFSQRANLRAHQRTHTGEKP-YA  107 (190)
T ss_dssp             CCSSHHHHHGGGC-C---CCEECTTTCCEESSHHHHHHHHHHHHC-CCCEECTTTCCEESCHHHHHHHHHHHHTCCC-EE
T ss_pred             cCCHHHHHHHHHH-cCCCCCccCCCcCchhCCHHHHHHHHHhcCC-CCCccCcccCCccCCHHHHHHHHHhcCCCCC-Cc
Confidence            4455567777777 7777778888888888777777778777777 7777777777777777777777777777766 77


Q ss_pred             cCCCCCccccccccCC--------Cccchhh-----hhhhhhhcccCCCCCcCcccCCCcccCcCcCCCcchhhcccccc
Q psy7450          81 VKHQGPEMLSIKHQGP--------ETLSIKH-----QVSEMLSIKHQGPETLSIKHQGPEMLSIKHQGPESAFDLRRNNQ  147 (161)
Q Consensus        81 C~~C~k~f~~~~~~~~--------~~~~~~~-----~~~~~l~~~~~~~~~~~~~~~c~~c~~~~~~~~~~~f~~~~~l~  147 (161)
                      |+.|++.|.+...+..        ..+....     .....| ..|++.|+++++|.|+.|        ++.|..+..|.
T Consensus       108 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L-~~H~~~H~~~~~~~C~~C--------~~~f~~~~~L~  178 (190)
T 2i13_A          108 CPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNL-HTHQRTHTGEKPYKCPEC--------GKSFSRRDALN  178 (190)
T ss_dssp             CTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHH-HHHHHHHHCCCCEECTTT--------CCEESSHHHHH
T ss_pred             CCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHH-HHHHHhcCCCCCeECCCC--------CCccCCHHHHH
Confidence            7777777765443111        0000000     011113 456666777778888888        88888888888


Q ss_pred             ccccChh
Q psy7450         148 AHLNGRK  154 (161)
Q Consensus       148 ~H~~~~~  154 (161)
                      .|++.+.
T Consensus       179 ~H~~~H~  185 (190)
T 2i13_A          179 VHQRTHT  185 (190)
T ss_dssp             HHHTTC-
T ss_pred             HHHHhcC
Confidence            8877654

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.92  E-value=1.5e-26  Score=151.92  Aligned_cols=110  Identities=16%  Similarity=0.098  Sum_probs=94.2

Q ss_pred             CCCccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCC
Q psy7450           7 LPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGP   86 (161)
Q Consensus         7 l~~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k   86 (161)
                      +..|..+ |+|+++|.|++|++.|.....|..|+++|++ ++||.|++|++.|...+.|..|+++|+++++ |.|++||+
T Consensus        10 ~~h~~~~-h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~C~k   86 (133)
T 2lt7_A           10 DDHYELI-VDGRVYYICIVCKRSYVCLTSLRRHFNIHSW-EKKYPCRYCEKVFPLAEYRTKHEIHHTGERR-YQCLACGK   86 (133)
T ss_dssp             SSEEEEE-ETTEEEEEETTTCCEESCHHHHHHHHHHHHC-CSCEECSSSSCEESSHHHHHHHHHHHHTCCC-EEESSSCC
T ss_pred             Hhhceee-cCCCcCeECCCCCCCcCCHHHHHHHHHHcCC-CCCeeCCccCeecccccchhhhccccCCCcc-ccCCCCCC
Confidence            3444566 9999999999999999999999999999999 9999999999999999999999999999998 99999999


Q ss_pred             ccccccccCCCccchhhhhhhhhhcccCCC------CCcCcccCCCcccCcCcCCCcchhhcc
Q psy7450          87 EMLSIKHQGPETLSIKHQVSEMLSIKHQGP------ETLSIKHQGPEMLSIKHQGPESAFDLR  143 (161)
Q Consensus        87 ~f~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~~~~~~c~~c~~~~~~~~~~~f~~~  143 (161)
                      +|.+.+.               | ..|++.      ...+.+|.|..|        ++.|...
T Consensus        87 ~F~~~~~---------------L-~~H~~~hh~~~p~~~~k~~~C~~C--------~k~~~~~  125 (133)
T 2lt7_A           87 SFINYQF---------------M-SSHIKSVHSQDPSGDSKLYRLHPC--------RSLQIRQ  125 (133)
T ss_dssp             EESSHHH---------------H-HHHHHHHTCCCTTSSSCCEEECCC--------CSSCCCC
T ss_pred             CcCCHHH---------------H-HHHhHHhcCCCCCCCCCCeecCCC--------Cchhhhc
Confidence            9998766               3 333333      334567889999        9888643

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.92  E-value=4e-27  Score=163.18  Aligned_cols=138  Identities=19%  Similarity=0.257  Sum_probs=84.4

Q ss_pred             CCCCCCccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCC
Q psy7450           4 EFNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   83 (161)
Q Consensus         4 ~~~l~~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~   83 (161)
                      ...|..|+.+ |.++++|.|+.|++.|.....|..|++.|.+ +++|.|..|++.|.....|..|+++|+++++ |.|+.
T Consensus         6 ~~~l~~h~~~-~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~   82 (190)
T 2i13_A            6 SSSSVAQAAL-EPGEKPYACPECGKSFSRSDHLAEHQRTHTG-EKPYKCPECGKSFSDKKDLTRHQRTHTGEKP-YKCPE   82 (190)
T ss_dssp             --------------------------CCSSHHHHHGGGCC----CCEECTTTCCEESSHHHHHHHHHHHHCCCC-EECTT
T ss_pred             hccchhhhhh-cCCCCCCcCCCCccccCCHHHHHHHHHHcCC-CCCccCCCcCchhCCHHHHHHHHHhcCCCCC-ccCcc
Confidence            4568889999 9999999999999999999999999999999 9999999999999999999999999999998 99999


Q ss_pred             CCCccccccccCCC--------ccchhh-----hhhhhhhcccCCCCCcCcccCCCcccCcCcCCCcchhhccccccccc
Q psy7450          84 QGPEMLSIKHQGPE--------TLSIKH-----QVSEMLSIKHQGPETLSIKHQGPEMLSIKHQGPESAFDLRRNNQAHL  150 (161)
Q Consensus        84 C~k~f~~~~~~~~~--------~~~~~~-----~~~~~l~~~~~~~~~~~~~~~c~~c~~~~~~~~~~~f~~~~~l~~H~  150 (161)
                      |++.|.+...+..+        .+....     .....| ..|+..|+++++|.|+.|        ++.|..+..|..|+
T Consensus        83 C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l-~~H~~~h~~~~~~~C~~C--------~~~f~~~~~L~~H~  153 (190)
T 2i13_A           83 CGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHL-RAHQRTHTGEKPYKCPEC--------GKSFSREDNLHTHQ  153 (190)
T ss_dssp             TCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHH-HHHHHHHHCCCCEECTTT--------CCEESCHHHHHHHH
T ss_pred             cCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHH-HHHHHHhCCCCCeECCCC--------CcccCCHHHHHHHH
Confidence            99999876542211        000000     011112 345566777778888888        88888888888887


Q ss_pred             cCh
Q psy7450         151 NGR  153 (161)
Q Consensus       151 ~~~  153 (161)
                      +.+
T Consensus       154 ~~H  156 (190)
T 2i13_A          154 RTH  156 (190)
T ss_dssp             HHH
T ss_pred             Hhc
Confidence            654

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.91  E-value=1.4e-25  Score=144.15  Aligned_cols=112  Identities=22%  Similarity=0.258  Sum_probs=103.8

Q ss_pred             CCCccccccc--ccccccCHHHHHHHHHHhcCCCCCeecC--CcCCccCchHHHHHHHHhhCCCCCccccCCCCCccccc
Q psy7450          16 LLQFRYTCDS--CGKVYKLKRSLYRHRTLECGKEPRYQCP--HCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSI   91 (161)
Q Consensus        16 ~~~k~~~C~~--C~~~f~~~~~l~~H~~~h~~~~k~~~C~--~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~~   91 (161)
                      +++++|.|..  |++.|.....|..|++.|.+ +++|.|.  .|++.|.....|..|+++|+++++ |.|+.|++.|.+.
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~   79 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTG-EKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP-FQCKTCQRKFSRS   79 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHT-TCCEECCSTTCCCEESSHHHHHHHHHHHHCCCC-EECTTTCCEESCH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCC-CCCccCCCCCCcCccCCHHHHHHHHHHcCCCCC-ccCCccCchhCCH
Confidence            6789999997  99999999999999999999 9999999  799999999999999999999998 9999999999987


Q ss_pred             cccCCCccchhhhhhhhhhcccCCCCCcCcccCC--CcccCcCcCCCcchhhccccccccccCh
Q psy7450          92 KHQGPETLSIKHQVSEMLSIKHQGPETLSIKHQG--PEMLSIKHQGPESAFDLRRNNQAHLNGR  153 (161)
Q Consensus        92 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~c--~~c~~~~~~~~~~~f~~~~~l~~H~~~~  153 (161)
                      ..               | ..|++.|+++.+|.|  +.|        ++.|..+..|..|++.+
T Consensus        80 ~~---------------l-~~H~~~h~~~~~~~C~~~~C--------~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           80 DH---------------L-KTHTRTHTGEKPFSCRWPSC--------QKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HH---------------H-HHHHHHHHTCCCEECCSTTC--------CCEESSHHHHHHHHHTC
T ss_pred             HH---------------H-HHHHHHhcCCCCeeCCCCCC--------ccccCCHHHHHHHHhcC
Confidence            76               5 667788889999999  899        99999999999998753

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.91  E-value=1.3e-25  Score=150.64  Aligned_cols=126  Identities=16%  Similarity=0.123  Sum_probs=113.1

Q ss_pred             CCCCCCCCCccc---cCCCCCcccccccc-----cccccCHHHHHHHHHHhcCCCCCeecCC--cCCccCchHHHHHHHH
Q psy7450           1 MFSEFNLPPHTL---FNPLLQFRYTCDSC-----GKVYKLKRSLYRHRTLECGKEPRYQCPH--CPYRGKQKVHLKTHVA   70 (161)
Q Consensus         1 f~~~~~l~~H~~---~~h~~~k~~~C~~C-----~~~f~~~~~l~~H~~~h~~~~k~~~C~~--C~~~f~~~~~l~~H~r   70 (161)
                      |.+...|..|+.   + |.++++|.|..|     ++.|.....|..|++.|++ +++|.|..  |++.|.....|..|++
T Consensus        13 f~~~~~L~~H~~~~h~-h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~   90 (155)
T 2gli_A           13 FDSQEQLVHHINSEHI-HGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTG-EKPHKCTFEGCRKSYSRLENLKTHLR   90 (155)
T ss_dssp             CSCHHHHHHHHHHHTS-SSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHC-CCCCCCCSTTCCCCCSSHHHHHHHHH
T ss_pred             cCCHHHHHHHHHhhcc-CCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCC-CCCccCCCCCCCCcccCHHHHHHHHH
Confidence            566677889987   6 899999998753     4999999999999999999 99999985  9999999999999999


Q ss_pred             hhCCCCCccccCC--CCCccccccccCCCccchhhhhhhhhhcccC-CCCCcCcccCCCc--ccCcCcCCCcchhhcccc
Q psy7450          71 IKHQGPEMLSVKH--QGPEMLSIKHQGPETLSIKHQVSEMLSIKHQ-GPETLSIKHQGPE--MLSIKHQGPESAFDLRRN  145 (161)
Q Consensus        71 ~h~~~~~~~~C~~--C~k~f~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~c~~--c~~~~~~~~~~~f~~~~~  145 (161)
                      +|+++++ |.|+.  |++.|.+.+.               | ..|+ ..|+++++|.|+.  |        ++.|..+..
T Consensus        91 ~h~~~~~-~~C~~~~C~~~f~~~~~---------------L-~~H~~~~H~~~~~~~C~~~~C--------~~~f~~~~~  145 (155)
T 2gli_A           91 SHTGEKP-YMCEHEGCSKAFSNASD---------------R-AKHQNRTHSNEKPYVCKLPGC--------TKRYTDPSS  145 (155)
T ss_dssp             HTTTCCC-EECCSTTCCCEESSSST---------------T-HHHHHHTTCSCCCEECCSTTT--------CCEESSHHH
T ss_pred             HcCCCCC-eeCCCCCCCCccCCHHH---------------H-HHHHHHhcCCCCCeeCCCCCC--------ccccCCHHH
Confidence            9999998 99998  9999998777               6 6676 7899999999988  9        999999999


Q ss_pred             ccccccCh
Q psy7450         146 NQAHLNGR  153 (161)
Q Consensus       146 l~~H~~~~  153 (161)
                      |..|++.+
T Consensus       146 L~~H~~~h  153 (155)
T 2gli_A          146 LRKHVKTV  153 (155)
T ss_dssp             HHHHHHHS
T ss_pred             HHHHHHhh
Confidence            99998754

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.90  E-value=8.1e-25  Score=141.42  Aligned_cols=110  Identities=19%  Similarity=0.209  Sum_probs=101.4

Q ss_pred             CCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhh---CCCCCccccCCCCCcccccc
Q psy7450          16 LLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIK---HQGPEMLSVKHQGPEMLSIK   92 (161)
Q Consensus        16 ~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h---~~~~~~~~C~~C~k~f~~~~   92 (161)
                      +++++|.|+.|++.|.....|..|++.|.+ +++|.|..|++.|.....|..|++.+   .++++ |.|+.|++.|.+..
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~-~~C~~C~~~f~~~~   80 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTG-EKPFECPKCGKCYFRKENLLEHEARNCMNRSEQV-FTCSVCQETFRRRM   80 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSS-CCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCC-EECSSSCCEESSHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCC-CCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCC-eECCCCCCccCCHH
Confidence            678999999999999999999999999999 99999999999999999999999964   56666 99999999999877


Q ss_pred             ccCCCccchhhhhhhhhhcccCCCCCcCcccCCCcccCcCcCCCcchhhcccccccccc
Q psy7450          93 HQGPETLSIKHQVSEMLSIKHQGPETLSIKHQGPEMLSIKHQGPESAFDLRRNNQAHLN  151 (161)
Q Consensus        93 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~c~~c~~~~~~~~~~~f~~~~~l~~H~~  151 (161)
                      .               | ..|++.|+++++|.|+.|        ++.|..+..|..|++
T Consensus        81 ~---------------l-~~H~~~h~~~~~~~C~~C--------~~~f~~~~~l~~H~~  115 (124)
T 2dlq_A           81 E---------------L-RLHMVSHTGEMPYKCSSC--------SQQFMQKKDLQSHMI  115 (124)
T ss_dssp             H---------------H-HHHHHHHSSSCSEECSSS--------CCEESSHHHHHHHHH
T ss_pred             H---------------H-HHHHHHcCCCCCccCCCc--------cchhCCHHHHHHHHH
Confidence            6               6 667788899999999999        999999999999986

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.90  E-value=1.6e-25  Score=155.07  Aligned_cols=127  Identities=20%  Similarity=0.297  Sum_probs=88.8

Q ss_pred             CCCCCCCCCccccCCCCCccccc--ccccccccCHHHHHHHHHHhcCCCCCeecC--CcCCccCchHHHHHHH-HhhC-C
Q psy7450           1 MFSEFNLPPHTLFNPLLQFRYTC--DSCGKVYKLKRSLYRHRTLECGKEPRYQCP--HCPYRGKQKVHLKTHV-AIKH-Q   74 (161)
Q Consensus         1 f~~~~~l~~H~~~~h~~~k~~~C--~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~--~C~~~f~~~~~l~~H~-r~h~-~   74 (161)
                      |.+...|..|+.+ |.++++|.|  +.|++.|.....|..|+++|.+ +++|.|.  .|++.|.....|..|+ +.|. +
T Consensus        24 f~~~~~L~~H~~~-h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~  101 (190)
T 1tf6_A           24 YNKNWKLQAHLCK-HTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTG-EKNFTCDSDGCDLRFTTKANMKKHFNRFHNIK  101 (190)
T ss_dssp             CSSHHHHHHHHHH-HHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTT-CCCEECCSSSCCCEESCHHHHHHHHHTTSSTT
T ss_pred             hCCHHHHHHHHHh-cCCCCCccCCCCCCChhhCCHHHHHHHHHHccC-CCceeCCCCCCCCccCCHHHHHHHHHHhcCCC
Confidence            3444556677777 777777777  6677777777777777777777 7777777  6777777777777777 4442 3


Q ss_pred             CCCcccc--CCCCCccccccccCCCccchhhhhhhhhhcccCCCCCcCcccCCCc--ccCcCcCCCcchhhccccccccc
Q psy7450          75 GPEMLSV--KHQGPEMLSIKHQGPETLSIKHQVSEMLSIKHQGPETLSIKHQGPE--MLSIKHQGPESAFDLRRNNQAHL  150 (161)
Q Consensus        75 ~~~~~~C--~~C~k~f~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~c~~--c~~~~~~~~~~~f~~~~~l~~H~  150 (161)
                      +++ |.|  +.||+.|.+...               | ..|+++|+++++|.|+.  |        ++.|..+..|..|+
T Consensus       102 ~~~-~~C~~~~C~k~f~~~~~---------------L-~~H~~~H~~~~~~~C~~~~C--------~k~F~~~~~L~~H~  156 (190)
T 1tf6_A          102 ICV-YVCHFENCGKAFKKHNQ---------------L-KVHQFSHTQQLPYECPHEGC--------DKRFSLPSRLKRHE  156 (190)
T ss_dssp             TSC-CEECSSSSCEECSSHHH---------------H-HHHHGGGSSSCSSBCCSSSC--------CCBCSSHHHHHHHH
T ss_pred             cce-eeCCCCCCccccCCHHH---------------H-HHHHHHhCCCCCccCCCCCC--------CchhcCHHHHHHHH
Confidence            344 777  667777776555               5 55666777777888866  7        88888888887777


Q ss_pred             cChh
Q psy7450         151 NGRK  154 (161)
Q Consensus       151 ~~~~  154 (161)
                      +.+.
T Consensus       157 ~~H~  160 (190)
T 1tf6_A          157 KVHA  160 (190)
T ss_dssp             TSSC
T ss_pred             HHhC
Confidence            6553

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.89  E-value=2.1e-24  Score=149.41  Aligned_cols=124  Identities=18%  Similarity=0.168  Sum_probs=111.7

Q ss_pred             CCCCCCCCCccccCCCCCcccccc--cccccccCHHHHHHHH-HHh-cCCCCCeec--CCcCCccCchHHHHHHHHhhCC
Q psy7450           1 MFSEFNLPPHTLFNPLLQFRYTCD--SCGKVYKLKRSLYRHR-TLE-CGKEPRYQC--PHCPYRGKQKVHLKTHVAIKHQ   74 (161)
Q Consensus         1 f~~~~~l~~H~~~~h~~~k~~~C~--~C~~~f~~~~~l~~H~-~~h-~~~~k~~~C--~~C~~~f~~~~~l~~H~r~h~~   74 (161)
                      |.+...|..|+.+ |.++++|.|+  .|++.|.....|..|+ ..| .+ +++|.|  ..|++.|...+.|..|+++|++
T Consensus        54 f~~~~~l~~H~~~-h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~-~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~  131 (190)
T 1tf6_A           54 FTSLHHLTRHSLT-HTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIK-ICVYVCHFENCGKAFKKHNQLKVHQFSHTQ  131 (190)
T ss_dssp             CSSHHHHHHHHTT-TTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTT-TSCCEECSSSSCEECSSHHHHHHHHGGGSS
T ss_pred             hCCHHHHHHHHHH-ccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCC-cceeeCCCCCCccccCCHHHHHHHHHHhCC
Confidence            5566678899999 9999999999  8999999999999999 666 35 789999  8999999999999999999999


Q ss_pred             CCCccccCC--CCCccccccccCCCccchhhhhhhhhhcccCCCCCcCcccCCCc---ccCcCcCCCcchhhcccccccc
Q psy7450          75 GPEMLSVKH--QGPEMLSIKHQGPETLSIKHQVSEMLSIKHQGPETLSIKHQGPE---MLSIKHQGPESAFDLRRNNQAH  149 (161)
Q Consensus        75 ~~~~~~C~~--C~k~f~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~c~~---c~~~~~~~~~~~f~~~~~l~~H  149 (161)
                      +++ |.|+.  |++.|.+.+.               | ..|+++|++   |.|+.   |        ++.|..+..|..|
T Consensus       132 ~~~-~~C~~~~C~k~F~~~~~---------------L-~~H~~~H~~---~~C~~~~~C--------~~~f~~~~~l~~H  183 (190)
T 1tf6_A          132 QLP-YECPHEGCDKRFSLPSR---------------L-KRHEKVHAG---YPCKKDDSC--------SFVGKTWTLYLKH  183 (190)
T ss_dssp             SCS-SBCCSSSCCCBCSSHHH---------------H-HHHHTSSCS---CCCCSTTTC--------CCCCSCHHHHHHH
T ss_pred             CCC-ccCCCCCCCchhcCHHH---------------H-HHHHHHhCC---CcCCCCCcC--------CCccccHHHHHHH
Confidence            998 99988  9999998777               6 678888887   89999   8        9999999999999


Q ss_pred             ccChh
Q psy7450         150 LNGRK  154 (161)
Q Consensus       150 ~~~~~  154 (161)
                      ++.+.
T Consensus       184 ~~~h~  188 (190)
T 1tf6_A          184 VAECH  188 (190)
T ss_dssp             HTTCC
T ss_pred             HHhhc
Confidence            98754

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.87  E-value=1.7e-23  Score=135.40  Aligned_cols=112  Identities=16%  Similarity=0.200  Sum_probs=99.1

Q ss_pred             CCcccccc--cccccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCC--CCCcccccc
Q psy7450          17 LQFRYTCD--SCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH--QGPEMLSIK   92 (161)
Q Consensus        17 ~~k~~~C~--~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~--C~k~f~~~~   92 (161)
                      ++++|.|+  .|++.|.....|..|++.| + +++|.|..|++.|.....|..|+++|+++++ |.|+.  |++.|.+..
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~~~C~~~f~~~~   78 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHTH-G-PRVHVCAECGKAFVESSKLKRHQLVHTGEKP-FQCTFEGCGKRFSLDF   78 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGGG-S-CCCEECTTTCCEESSHHHHHHHGGGTSCCCC-EECCSTTCCCEESCHH
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHHc-C-CCCeECCCCCchhCCHHHHHHHHHHcCCCCC-eeCCCCCCcCccCCHH
Confidence            35789999  8999999999999999998 7 8999999999999999999999999999998 99986  999999776


Q ss_pred             ccCCCccchhhhhhhhhhcccCCCCCcCcccCCC--cccCcCcCCCcchhhccccccccccChhh
Q psy7450          93 HQGPETLSIKHQVSEMLSIKHQGPETLSIKHQGP--EMLSIKHQGPESAFDLRRNNQAHLNGRKD  155 (161)
Q Consensus        93 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~c~--~c~~~~~~~~~~~f~~~~~l~~H~~~~~~  155 (161)
                      .               | ..|++.|+++++|.|+  .|        ++.|..+.+|..|++.+..
T Consensus        79 ~---------------l-~~H~~~h~~~~~~~C~~~~C--------~~~f~~~~~L~~H~~~H~~  119 (124)
T 1ubd_C           79 N---------------L-RTHVRIHTGDRPYVCPFDGC--------NKKFAQSTNLKSHILTHAK  119 (124)
T ss_dssp             H---------------H-HHHHHHHHCCCCCCCCSTTC--------CCCCSSTTTTHHHHHHHC-
T ss_pred             H---------------H-HHHHHHhCCCCceECCCCCC--------CCccCCHHHHHHHHHHHcc
Confidence            6               5 6677788899999996  59        9999999999999986543

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.86  E-value=2.5e-22  Score=134.63  Aligned_cols=114  Identities=18%  Similarity=0.241  Sum_probs=103.4

Q ss_pred             CCCCcccccccccccccCHHHHHHHHHH-hcCCCCC--------eecCCcCCccCchHHHHHHHHhhCCCCCccccCC--
Q psy7450          15 PLLQFRYTCDSCGKVYKLKRSLYRHRTL-ECGKEPR--------YQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH--   83 (161)
Q Consensus        15 h~~~k~~~C~~C~~~f~~~~~l~~H~~~-h~~~~k~--------~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~--   83 (161)
                      .....+|.|..|++.|.....|..|++. |.+ ..+        |.|..|++.|.....|..|+++|+++++ |.|+.  
T Consensus        20 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~-~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~~~   97 (155)
T 2rpc_A           20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVG-GPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKP-FPCPFPG   97 (155)
T ss_dssp             CTTCCSSSCCCCCCCBSSHHHHHHHHHTTTSC-CTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCS-EECSCTT
T ss_pred             chhhcccccccCCcccCCHHHHHHHHHhhcCC-CcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCc-ccCCcCC
Confidence            5667889999999999999999999997 766 554        8999999999999999999999999998 99998  


Q ss_pred             CCCccccccccCCCccchhhhhhhhhhcccCCCCCcCcccCCCc--ccCcCcCCCcchhhccccccccccChh
Q psy7450          84 QGPEMLSIKHQGPETLSIKHQVSEMLSIKHQGPETLSIKHQGPE--MLSIKHQGPESAFDLRRNNQAHLNGRK  154 (161)
Q Consensus        84 C~k~f~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~c~~--c~~~~~~~~~~~f~~~~~l~~H~~~~~  154 (161)
                      |++.|.+...               | ..|+++|+++++|.|+.  |        ++.|..+..|..|++.+.
T Consensus        98 C~~~f~~~~~---------------L-~~H~~~h~~~~~~~C~~~~C--------~k~f~~~~~L~~H~~~H~  146 (155)
T 2rpc_A           98 CGKIFARSEN---------------L-KIHKRTHTGEKPFKCEFEGC--------DRRFANSSDRKKHMHVHT  146 (155)
T ss_dssp             TCCEESCHHH---------------H-HHHHTTTCSSCSBCCSSTTC--------CCCBSSHHHHHHSSTTTT
T ss_pred             CCCccCCHHH---------------H-HHHHHhhCCCCCccCCCCCC--------CCccCCHHHHHHHHHHhc
Confidence            9999998776               6 67888999999999996  9        999999999999998654

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.85  E-value=2.4e-22  Score=134.71  Aligned_cols=108  Identities=19%  Similarity=0.221  Sum_probs=97.6

Q ss_pred             CCCCCCCCCccccCCCCCcc--------cccccccccccCHHHHHHHHHHhcCCCCCeecCC--cCCccCchHHHHHHHH
Q psy7450           1 MFSEFNLPPHTLFNPLLQFR--------YTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPH--CPYRGKQKVHLKTHVA   70 (161)
Q Consensus         1 f~~~~~l~~H~~~~h~~~k~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~--C~~~f~~~~~l~~H~r   70 (161)
                      |.+...|..|+.++|.+..+        |.|..|++.|.....|..|++.|++ +++|.|..  |++.|.....|..|++
T Consensus        35 f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~L~~H~~  113 (155)
T 2rpc_A           35 FSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTG-EKPFPCPFPGCGKIFARSENLKIHKR  113 (155)
T ss_dssp             BSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHC-CCSEECSCTTTCCEESCHHHHHHHHT
T ss_pred             cCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCC-CCcccCCcCCCCCccCCHHHHHHHHH
Confidence            44556788898876777665        8999999999999999999999999 99999998  9999999999999999


Q ss_pred             hhCCCCCccccCC--CCCccccccccCCCccchhhhhhhhhhcccCCCCCcCcccCCC
Q psy7450          71 IKHQGPEMLSVKH--QGPEMLSIKHQGPETLSIKHQVSEMLSIKHQGPETLSIKHQGP  126 (161)
Q Consensus        71 ~h~~~~~~~~C~~--C~k~f~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~c~  126 (161)
                      +|+++++ |.|+.  |++.|.+...               | ..|+++|+++++|.|+
T Consensus       114 ~h~~~~~-~~C~~~~C~k~f~~~~~---------------L-~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          114 THTGEKP-FKCEFEGCDRRFANSSD---------------R-KKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             TTCSSCS-BCCSSTTCCCCBSSHHH---------------H-HHSSTTTTSCCCSCSC
T ss_pred             hhCCCCC-ccCCCCCCCCccCCHHH---------------H-HHHHHHhcCCCCCCCC
Confidence            9999998 99997  9999998777               7 7799999999999986

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.83  E-value=5.5e-22  Score=130.14  Aligned_cols=88  Identities=20%  Similarity=0.320  Sum_probs=81.1

Q ss_pred             CCCCCCCCCccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCC---
Q psy7450           1 MFSEFNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPE---   77 (161)
Q Consensus         1 f~~~~~l~~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~---   77 (161)
                      |.+...|..|+++ |++++||.|+.|++.|.....|..|+++|+| ++||.|++|++.|...+.|..|+++|++++|   
T Consensus        32 F~~~~~L~~H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~~  109 (133)
T 2lt7_A           32 YVCLTSLRRHFNI-HSWEKKYPCRYCEKVFPLAEYRTKHEIHHTG-ERRYQCLACGKSFINYQFMSSHIKSVHSQDPSGD  109 (133)
T ss_dssp             ESCHHHHHHHHHH-HHCCSCEECSSSSCEESSHHHHHHHHHHHHT-CCCEEESSSCCEESSHHHHHHHHHHHTCCCTTSS
T ss_pred             cCCHHHHHHHHHH-cCCCCCeeCCccCeecccccchhhhccccCC-CccccCCCCCCCcCCHHHHHHHhHHhcCCCCCCC
Confidence            5666789999999 9999999999999999999999999999999 9999999999999999999999999987653   


Q ss_pred             --ccccCCCCCcccc
Q psy7450          78 --MLSVKHQGPEMLS   90 (161)
Q Consensus        78 --~~~C~~C~k~f~~   90 (161)
                        +|.|..|++.|..
T Consensus       110 ~k~~~C~~C~k~~~~  124 (133)
T 2lt7_A          110 SKLYRLHPCRSLQIR  124 (133)
T ss_dssp             SCCEEECCCCSSCCC
T ss_pred             CCCeecCCCCchhhh
Confidence              4899999998864

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.83  E-value=4.1e-22  Score=128.85  Aligned_cols=104  Identities=21%  Similarity=0.287  Sum_probs=87.8

Q ss_pred             CCCCCCCCCccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCC--cCCccCchHHHHHHHHhhCCCCCc
Q psy7450           1 MFSEFNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPH--CPYRGKQKVHLKTHVAIKHQGPEM   78 (161)
Q Consensus         1 f~~~~~l~~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~--C~~~f~~~~~l~~H~r~h~~~~~~   78 (161)
                      |.+...|..|+.+ | ++++|.|..|++.|.....|..|++.|++ +++|.|..  |++.|.....|..|+++|+++++ 
T Consensus        17 f~~~~~l~~H~~~-h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-   92 (124)
T 1ubd_C           17 FRDNSAMRKHLHT-H-GPRVHVCAECGKAFVESSKLKRHQLVHTG-EKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRP-   92 (124)
T ss_dssp             ESSHHHHHHHHGG-G-SCCCEECTTTCCEESSHHHHHHHGGGTSC-CCCEECCSTTCCCEESCHHHHHHHHHHHHCCCC-
T ss_pred             cCCHHHHHHHHHH-c-CCCCeECCCCCchhCCHHHHHHHHHHcCC-CCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCc-
Confidence            4455678899999 7 88999999999999999999999999999 99999986  99999999999999999999998 


Q ss_pred             cccC--CCCCccccccccCCCccchhhhhhhhhhcccCCCCCcCcccC
Q psy7450          79 LSVK--HQGPEMLSIKHQGPETLSIKHQVSEMLSIKHQGPETLSIKHQ  124 (161)
Q Consensus        79 ~~C~--~C~k~f~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  124 (161)
                      |.|+  .|++.|.+.+.               | ..|+++|+++++++
T Consensus        93 ~~C~~~~C~~~f~~~~~---------------L-~~H~~~H~~~k~~q  124 (124)
T 1ubd_C           93 YVCPFDGCNKKFAQSTN---------------L-KSHILTHAKAKNNQ  124 (124)
T ss_dssp             CCCCSTTCCCCCSSTTT---------------T-HHHHHHHC------
T ss_pred             eECCCCCCCCccCCHHH---------------H-HHHHHHHcccccCC
Confidence            9996  59999998777               5 55777777776653

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.82  E-value=1.3e-21  Score=124.91  Aligned_cols=89  Identities=15%  Similarity=0.063  Sum_probs=80.9

Q ss_pred             CCCCCCCCccccCCCCCcccccccccccccCHHHHHHHHHH--hcCCCCCe-ecCCcCCcc--CchHHHHHHHHhhCCCC
Q psy7450           2 FSEFNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTL--ECGKEPRY-QCPHCPYRG--KQKVHLKTHVAIKHQGP   76 (161)
Q Consensus         2 ~~~~~l~~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~--h~~~~k~~-~C~~C~~~f--~~~~~l~~H~r~h~~~~   76 (161)
                      ++...|..|+++ |++++||.|+.|++.|.....|..|++.  +.+ ++++ .|..|++.|  .....|..|+++|++++
T Consensus         2 ss~~~l~~H~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~-~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~   79 (115)
T 2dmi_A            2 SSGSSGKLYGSI-FTGASKFRCKDCSAAYDTLVELTVHMNETGHYR-DDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQK   79 (115)
T ss_dssp             CCCCCCCCCCCC-CCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCB-CSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCS
T ss_pred             ccchhhhhheee-eCCCCCEECCccCchhcCHHHHHHHHHHhCccc-cCCCccCCCCCcccccccHHHHHHHhhccCCCc
Confidence            356789999999 9999999999999999999999999998  777 6655 499999999  89999999999999999


Q ss_pred             CccccCCCCCccccccc
Q psy7450          77 EMLSVKHQGPEMLSIKH   93 (161)
Q Consensus        77 ~~~~C~~C~k~f~~~~~   93 (161)
                      + |.|++|++.|.....
T Consensus        80 ~-~~C~~C~k~f~~~~~   95 (115)
T 2dmi_A           80 V-LKCMYCGHSFESLQD   95 (115)
T ss_dssp             S-CBCSSSCCBCSSHHH
T ss_pred             c-eECCCCCCccCCHHH
Confidence            8 999999999998766

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.82  E-value=1.6e-20  Score=118.18  Aligned_cols=93  Identities=17%  Similarity=0.323  Sum_probs=85.6

Q ss_pred             CCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCcccccccc
Q psy7450          15 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQ   94 (161)
Q Consensus        15 h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~~~~~   94 (161)
                      ..++++|.|..|++.|.....|..|++.|.+ +++|.|.+|++.|.....|..|+++|+++++ |.|+.|++.|.+... 
T Consensus        12 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~-   88 (106)
T 2ee8_A           12 SKTKKEFICKFCGRHFTKSYNLLIHERTHTD-ERPYTCDICHKAFRRQDHLRDHRYIHSKEKP-FKCQECGKGFCQSRT-   88 (106)
T ss_dssp             CCCCCCCBCSSSCCBCSSHHHHHHHHHHHCC-SCCCBCSSSCCBCSCHHHHHHHGGGSCCCCT-TSCSSSCCCCSSHHH-
T ss_pred             cCCCcCeECCCCCCccCCHHHHHHHHHHcCC-CCCcCCCCccchhCCHHHHHHHHHHhCCCCC-eECCCcCCcccCHHH-
Confidence            5667899999999999999999999999999 9999999999999999999999999999998 999999999998777 


Q ss_pred             CCCccchhhhhhhhhhcccCCCCCcCcccCC
Q psy7450          95 GPETLSIKHQVSEMLSIKHQGPETLSIKHQG  125 (161)
Q Consensus        95 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~c  125 (161)
                                    | ..|+++|+++++|..
T Consensus        89 --------------L-~~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           89 --------------L-AVHKTLHMQTSSPTA  104 (106)
T ss_dssp             --------------H-HHHHHHTTSCCCCCC
T ss_pred             --------------H-HHHHHHhCCCCCCcC
Confidence                          6 668888888888764

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.82  E-value=2.3e-20  Score=115.38  Aligned_cols=90  Identities=20%  Similarity=0.296  Sum_probs=82.7

Q ss_pred             CCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCcccccccc
Q psy7450          15 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQ   94 (161)
Q Consensus        15 h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~~~~~   94 (161)
                      +.++++|.|..|++.|.....|..|++.|.+ +++|.|..|++.|.....|..|+++|+++++ |.|+.|++.|.+... 
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~-   79 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTG-VKPYKCKTCDYAAADSSSLNKHLRIHSDERP-FKCQICPYASRNSSQ-   79 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGGGCCC-CCSEECSSSCCEESSHHHHHHHHHHSCCCCC-EECSSSSCEESSHHH-
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHHhcCC-CCCEeCCCCCCccCCHHHHHHHHHHhCCCCC-ccCCCCCCccCCHHH-
Confidence            5788999999999999999999999999999 9999999999999999999999999999988 999999999998777 


Q ss_pred             CCCccchhhhhhhhhhcccCCCCCcCcc
Q psy7450          95 GPETLSIKHQVSEMLSIKHQGPETLSIK  122 (161)
Q Consensus        95 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~  122 (161)
                                    | ..|++.|+++.+
T Consensus        80 --------------l-~~H~~~h~~~~~   92 (96)
T 2dmd_A           80 --------------L-TVHLRSHTGDSG   92 (96)
T ss_dssp             --------------H-HHHHTTCCSCCC
T ss_pred             --------------H-HHHHHHhcCCCC
Confidence                          6 667778877654

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.82  E-value=5.1e-21  Score=128.09  Aligned_cols=110  Identities=13%  Similarity=0.122  Sum_probs=97.9

Q ss_pred             CcccccccccccccCHHHHHHHHH---HhcCCCCCeecCC-----cCCccCchHHHHHHHHhhCCCCCccccCC--CCCc
Q psy7450          18 QFRYTCDSCGKVYKLKRSLYRHRT---LECGKEPRYQCPH-----CPYRGKQKVHLKTHVAIKHQGPEMLSVKH--QGPE   87 (161)
Q Consensus        18 ~k~~~C~~C~~~f~~~~~l~~H~~---~h~~~~k~~~C~~-----C~~~f~~~~~l~~H~r~h~~~~~~~~C~~--C~k~   87 (161)
                      |.+|.|+.|++.|.+...|..|++   +|.+ +++|.|..     |++.|.....|..|+++|+++++ |.|+.  |++.
T Consensus         1 E~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~-~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~-~~C~~~~C~~~   78 (155)
T 2gli_A            1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGE-RKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKP-HKCTFEGCRKS   78 (155)
T ss_dssp             CCBCCBTTCCCBCSCHHHHHHHHHHHTSSSC-SSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCC-CCCCSTTCCCC
T ss_pred             CCcCCcCCCccccCCHHHHHHHHHhhccCCC-CcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCC-ccCCCCCCCCc
Confidence            458999999999999999999998   6777 89999875     34999999999999999999998 99985  9999


Q ss_pred             cccccccCCCccchhhhhhhhhhcccCCCCCcCcccCCCc--ccCcCcCCCcchhhccccccccc-cCh
Q psy7450          88 MLSIKHQGPETLSIKHQVSEMLSIKHQGPETLSIKHQGPE--MLSIKHQGPESAFDLRRNNQAHL-NGR  153 (161)
Q Consensus        88 f~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~c~~--c~~~~~~~~~~~f~~~~~l~~H~-~~~  153 (161)
                      |.+...               | ..|++.|+++++|.|+.  |        ++.|.....|..|+ +.+
T Consensus        79 f~~~~~---------------l-~~H~~~h~~~~~~~C~~~~C--------~~~f~~~~~L~~H~~~~H  123 (155)
T 2gli_A           79 YSRLEN---------------L-KTHLRSHTGEKPYMCEHEGC--------SKAFSNASDRAKHQNRTH  123 (155)
T ss_dssp             CSSHHH---------------H-HHHHHHTTTCCCEECCSTTC--------CCEESSSSTTHHHHHHTT
T ss_pred             ccCHHH---------------H-HHHHHHcCCCCCeeCCCCCC--------CCccCCHHHHHHHHHHhc
Confidence            998776               6 66778889999999998  9        99999999999998 544

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.81  E-value=1.2e-21  Score=125.68  Aligned_cols=90  Identities=22%  Similarity=0.343  Sum_probs=83.6

Q ss_pred             CCCCCCCCCccccCCCCCcccccc--cccccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCc
Q psy7450           1 MFSEFNLPPHTLFNPLLQFRYTCD--SCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEM   78 (161)
Q Consensus         1 f~~~~~l~~H~~~~h~~~k~~~C~--~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~   78 (161)
                      |.+...|..|+.+ |.++++|.|+  .|++.|.....|..|++.|++ +++|.|..|++.|.....|..|+++|+++++ 
T Consensus        18 f~~~~~l~~H~~~-h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-   94 (119)
T 2jp9_A           18 YFKLSHLQMHSRK-HTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTG-VKPFQCKTCQRKFSRSDHLKTHTRTHTGEKP-   94 (119)
T ss_dssp             BSCHHHHHHHHHH-HHTTCCEECCSTTCCCEESSHHHHHHHHHHHHC-CCCEECTTTCCEESCHHHHHHHHHHHHTCCC-
T ss_pred             hCCHHHHHHHHHh-hCCCCCccCCCCCCcCccCCHHHHHHHHHHcCC-CCCccCCccCchhCCHHHHHHHHHHhcCCCC-
Confidence            4556678899999 9999999999  799999999999999999999 9999999999999999999999999999998 


Q ss_pred             ccc--CCCCCccccccc
Q psy7450          79 LSV--KHQGPEMLSIKH   93 (161)
Q Consensus        79 ~~C--~~C~k~f~~~~~   93 (161)
                      |.|  +.||+.|.+.+.
T Consensus        95 ~~C~~~~C~~~f~~~~~  111 (119)
T 2jp9_A           95 FSCRWPSCQKKFARSDE  111 (119)
T ss_dssp             EECCSTTCCCEESSHHH
T ss_pred             eeCCCCCCccccCCHHH
Confidence            999  899999997766

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.81  E-value=3.6e-21  Score=124.15  Aligned_cols=90  Identities=19%  Similarity=0.362  Sum_probs=82.8

Q ss_pred             CCCCCCCCCccccCCCCCcccccccccccccCHHHHHHHHHH---hcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCC
Q psy7450           1 MFSEFNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTL---ECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPE   77 (161)
Q Consensus         1 f~~~~~l~~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~---h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~   77 (161)
                      |.+...|..|+.+ |.++++|.|+.|++.|.....|..|+..   +.+ +++|.|.+|++.|.....|..|+++|+++++
T Consensus        17 f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   94 (124)
T 2dlq_A           17 FLSKYYLKVHNRK-HTGEKPFECPKCGKCYFRKENLLEHEARNCMNRS-EQVFTCSVCQETFRRRMELRLHMVSHTGEMP   94 (124)
T ss_dssp             CSSHHHHHHHHHH-HSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSC-CCCEECSSSCCEESSHHHHHHHHHHHSSSCS
T ss_pred             CCCHHHHHHHHHh-CCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCC-CCCeECCCCCCccCCHHHHHHHHHHcCCCCC
Confidence            4556678899999 9999999999999999999999999985   567 8999999999999999999999999999998


Q ss_pred             ccccCCCCCccccccc
Q psy7450          78 MLSVKHQGPEMLSIKH   93 (161)
Q Consensus        78 ~~~C~~C~k~f~~~~~   93 (161)
                       |.|+.|++.|.+...
T Consensus        95 -~~C~~C~~~f~~~~~  109 (124)
T 2dlq_A           95 -YKCSSCSQQFMQKKD  109 (124)
T ss_dssp             -EECSSSCCEESSHHH
T ss_pred             -ccCCCccchhCCHHH
Confidence             999999999997766

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.81  E-value=2e-20  Score=118.02  Aligned_cols=98  Identities=15%  Similarity=0.067  Sum_probs=87.6

Q ss_pred             CCccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCc
Q psy7450           8 PPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPE   87 (161)
Q Consensus         8 ~~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~   87 (161)
                      ..++.+ |+++++|.|.+|++.|.....|..|++.|   .++|.|.+|++.|.....|..|++ |+++++ |.|+.|++.
T Consensus         5 ss~~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~H---~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~-~~C~~C~~~   78 (107)
T 1wjp_A            5 SSGASP-VENKEVYQCRLCNAKLSSLLEQGSHERLC---RNAAVCPYCSLRFFSPELKQEHES-KCEYKK-LTCLECMRT   78 (107)
T ss_dssp             CCCCCC-CCCCCCCBCTTTCCBCSSHHHHHHHHHHH---HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGG-GEEGGGTEE
T ss_pred             cccCcc-cCCCcCeECCCCCCccCCHHHHHHHHHHC---CCCccCCCCCCccCCHHHHHHHHH-cCCCCC-ccCccccch
Confidence            456778 99999999999999999999999999998   468999999999999999999996 888888 999999999


Q ss_pred             cccccccCCCccchhhhhhhhhhcccCC-CCCcCcccCCCc
Q psy7450          88 MLSIKHQGPETLSIKHQVSEMLSIKHQG-PETLSIKHQGPE  127 (161)
Q Consensus        88 f~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~c~~  127 (161)
                      |.+...               | ..|++ +|+++++|.+..
T Consensus        79 f~~~~~---------------L-~~H~~~~H~~~~~~~~~~  103 (107)
T 1wjp_A           79 FKSSFS---------------I-WRHQVEVHNQNNMAPTSG  103 (107)
T ss_dssp             CSSHHH---------------H-HHHHHHTSCCCCCCCCCC
T ss_pred             hCCHHH---------------H-HHHHHHHcCCCCCCCCCC
Confidence            998777               6 66775 899999987753

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.80  E-value=2.4e-20  Score=113.89  Aligned_cols=87  Identities=21%  Similarity=0.365  Sum_probs=76.3

Q ss_pred             CCcccccc--cccccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCcccccccc
Q psy7450          17 LQFRYTCD--SCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQ   94 (161)
Q Consensus        17 ~~k~~~C~--~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~~~~~   94 (161)
                      |++||.|.  .|++.|.....|..|+++|.+ +++|.|..|++.|.....|..|+++|+++++ |.|+.|++.|.+.+. 
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~-   77 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTG-QKPFQCRICMRNFSRSDHLTTHIRTHTGEKP-FACDICGRKFARSDE-   77 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHC-CCCEECTTTCCEESCHHHHHHHHHHHHCCCC-EECTTTCCEESSHHH-
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCC-CCCccCCCCCcccCCHHHHHHHHHHcCCCCC-ccCCCCCchhCCHHH-
Confidence            46899998  599999999999999999999 9999999999999999999999999999998 999999999998776 


Q ss_pred             CCCccchhhhhhhhhhcccCCCCCcCc
Q psy7450          95 GPETLSIKHQVSEMLSIKHQGPETLSI  121 (161)
Q Consensus        95 ~~~~~~~~~~~~~~l~~~~~~~~~~~~  121 (161)
                                    | ..|+++|++++
T Consensus        78 --------------l-~~H~~~H~~~k   89 (90)
T 1a1h_A           78 --------------R-KRHTKIHLRQK   89 (90)
T ss_dssp             --------------H-HHHHGGGGC--
T ss_pred             --------------H-HHHHHHhcccC
Confidence                          5 55666666553

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.80  E-value=4.6e-21  Score=122.42  Aligned_cols=97  Identities=13%  Similarity=0.159  Sum_probs=85.5

Q ss_pred             HHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHh--hCCCCCccccCCCCCcc--ccccccCCCccchhhhhhhhh
Q psy7450          34 RSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAI--KHQGPEMLSVKHQGPEM--LSIKHQGPETLSIKHQVSEML  109 (161)
Q Consensus        34 ~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~--h~~~~~~~~C~~C~k~f--~~~~~~~~~~~~~~~~~~~~l  109 (161)
                      ..|..|+++|++ +++|.|..|++.|.....|..|+++  |.++++.+.|+.|++.|  .....               |
T Consensus         5 ~~l~~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~---------------l   68 (115)
T 2dmi_A            5 SSGKLYGSIFTG-ASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRS---------------L   68 (115)
T ss_dssp             CCCCCCCCCCCC-CCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCC---------------C
T ss_pred             hhhhhheeeeCC-CCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHH---------------H
Confidence            456778889999 9999999999999999999999999  77777756799999999  65555               5


Q ss_pred             hcccCCCCCcCcccCCCcccCcCcCCCcchhhccccccccccChhh
Q psy7450         110 SIKHQGPETLSIKHQGPEMLSIKHQGPESAFDLRRNNQAHLNGRKD  155 (161)
Q Consensus       110 ~~~~~~~~~~~~~~~c~~c~~~~~~~~~~~f~~~~~l~~H~~~~~~  155 (161)
                       ..|+++|+++++|.|+.|        ++.|..+.+|..|++.+..
T Consensus        69 -~~H~~~H~~~~~~~C~~C--------~k~f~~~~~L~~H~~~hh~  105 (115)
T 2dmi_A           69 -LEMEGKEDAQKVLKCMYC--------GHSFESLQDLSVHMIKTKH  105 (115)
T ss_dssp             -CCCCCSCCCCSSCBCSSS--------CCBCSSHHHHHHHHHHTTT
T ss_pred             -HHHhhccCCCcceECCCC--------CCccCCHHHHHHHHHHhCC
Confidence             668999999999999999        9999999999999976554

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.80  E-value=6.1e-20  Score=103.93  Aligned_cols=58  Identities=26%  Similarity=0.580  Sum_probs=55.6

Q ss_pred             CcccccccccccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCC
Q psy7450          18 QFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGP   76 (161)
Q Consensus        18 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~   76 (161)
                      |+||.|++||+.|...+.|..|+++|+| ++||.|.+||++|...+.|..|+++|+|++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~-ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLG-YRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHT-CCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCC-CcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            7899999999999999999999999999 999999999999999999999999999864

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.79  E-value=5.6e-19  Score=106.83  Aligned_cols=81  Identities=15%  Similarity=0.227  Sum_probs=74.9

Q ss_pred             CCCCccccCCCCCcccccccccccccCHHHHHHHHHHhcCCC---CCeecCCcCCccCchHHHHHHHHhhCCCCCccccC
Q psy7450           6 NLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKE---PRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVK   82 (161)
Q Consensus         6 ~l~~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~---k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~   82 (161)
                      +|..|+++ |++++||.|..|++.|.....|..|++.+++..   ++|.|..|++.|.....|..|+++|+++++ +.|.
T Consensus         2 s~~~H~~~-H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~-~~~~   79 (86)
T 1x6h_A            2 SSGSSGRT-HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDG-VEGE   79 (86)
T ss_dssp             TTTCCSTT-CCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCS-CCCC
T ss_pred             Ccccccce-ecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCC-cccC
Confidence            47789999 999999999999999999999999998877622   789999999999999999999999999998 9999


Q ss_pred             CCCCcc
Q psy7450          83 HQGPEM   88 (161)
Q Consensus        83 ~C~k~f   88 (161)
                      .|+.+|
T Consensus        80 ~~~~~~   85 (86)
T 1x6h_A           80 NSGPSS   85 (86)
T ss_dssp             CCCCCC
T ss_pred             CCCCCC
Confidence            999875

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.78  E-value=2.5e-19  Score=110.40  Aligned_cols=77  Identities=26%  Similarity=0.440  Sum_probs=72.4

Q ss_pred             CCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCC--CCccccCCCCCcccccc
Q psy7450          15 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQG--PEMLSVKHQGPEMLSIK   92 (161)
Q Consensus        15 h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~--~~~~~C~~C~k~f~~~~   92 (161)
                      .+++++|.|..|++.|.....|..|++.|++ +++|.|..|++.|.....|..|++.|+++  ++ |.|+.|++.|.+..
T Consensus         2 s~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~-~~C~~C~~~f~~~~   79 (95)
T 2yt9_A            2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSG-EKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKP-YICQSCGKGFSRPD   79 (95)
T ss_dssp             CCCCSCEECSSSCCEESSSHHHHHHHHHSCS-SCSEECSSSCCEESCHHHHHHHHHHHCCCCCSS-BCCSSSCCCBSSHH
T ss_pred             CCCCCCeECCCCCCccCChHHHHHHHHhcCC-CCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCc-eECCCccchhCCHH
Confidence            3678999999999999999999999999999 99999999999999999999999999987  66 99999999999776


Q ss_pred             c
Q psy7450          93 H   93 (161)
Q Consensus        93 ~   93 (161)
                      .
T Consensus        80 ~   80 (95)
T 2yt9_A           80 H   80 (95)
T ss_dssp             H
T ss_pred             H
Confidence            6

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.77  E-value=8.8e-20  Score=109.41  Aligned_cols=72  Identities=24%  Similarity=0.420  Sum_probs=68.9

Q ss_pred             ccccccccccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCccccccc
Q psy7450          20 RYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKH   93 (161)
Q Consensus        20 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~~~~   93 (161)
                      ||.|..|++.|.....|..|++.|.+ +++|.|..|++.|.....|..|+++|+++++ |.|+.|++.|.+.+.
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~   72 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSD-TRPYPCQYCGKRFHQKSDMKKHTFIHTGEKP-HKCQVCGKAFSQSSN   72 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHT-CCCEECSSSCCEESSHHHHHHHHHHHHTCCC-EECTTTSCEESSHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCC-CCCeeCCcCChhhCCHHHHHHHHHHhcCCCC-CcCCCcchhhCChHH
Confidence            68999999999999999999999999 9999999999999999999999999999998 999999999997766

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.76  E-value=1.6e-18  Score=103.27  Aligned_cols=72  Identities=22%  Similarity=0.490  Sum_probs=68.2

Q ss_pred             CCCCccccccc--ccccccCHHHHHHHHH-HhcCCCCCeecCC--cCCccCchHHHHHHHHhhCCCCCccccCCCCCcc
Q psy7450          15 PLLQFRYTCDS--CGKVYKLKRSLYRHRT-LECGKEPRYQCPH--CPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEM   88 (161)
Q Consensus        15 h~~~k~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~k~~~C~~--C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f   88 (161)
                      .+++++|.|..  |++.|.....|..|++ .|.+ +++|.|..  |++.|...+.|..|+++|+++++ |.|++||++|
T Consensus         2 s~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~-~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C~k~F   78 (79)
T 2dlk_A            2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIH-QKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRD-YICEFSGPSS   78 (79)
T ss_dssp             CSCCSSEECSSTTTCCEESSHHHHHHHHHHGGGS-CCCEECSCTTTCCEESSHHHHHHHHHHHHTSCC-CSCCSSSCCC
T ss_pred             CCCCCCccCCCCCCcCccCCHHHHHHHHHHHhCC-CCCeECCCCCCcCccCCHHHHHHHHHHhCCCCC-eeCCCCCCCC
Confidence            46788999987  9999999999999999 7999 99999999  99999999999999999999998 9999999998

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.75  E-value=1.9e-18  Score=109.32  Aligned_cols=76  Identities=24%  Similarity=0.335  Sum_probs=73.1

Q ss_pred             CCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCccccccc
Q psy7450          15 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKH   93 (161)
Q Consensus        15 h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~~~~   93 (161)
                      |+++++|.| .|++.|.....|..|++.|.+ +++|.|.+|++.|.....|..|+++|+++++ |.|+.|++.|.....
T Consensus         5 h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~   80 (110)
T 2csh_A            5 SSGDKLYPC-QCGKSFTHKSQRDRHMSMHLG-LRPYGCGVCGKKFKMKHHLVGHMKIHTGIKP-YECNICAKRFMWRDS   80 (110)
T ss_dssp             CCCCCCEEC-TTSCEESSHHHHHHHHHHHSC-CCSEECTTTSCEESSSHHHHHHHTTTCCCCC-EECSSSCCEESCHHH
T ss_pred             CCCCCCEec-cCCCccCCHHHHHHHHHHcCC-CcCccCCCCCcccCCHHHHHHHHHHcCCCCC-eeCCCCcchhcCHHH
Confidence            899999999 999999999999999999999 9999999999999999999999999999988 999999999987765

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.74  E-value=6.7e-19  Score=111.42  Aligned_cols=89  Identities=16%  Similarity=0.156  Sum_probs=80.8

Q ss_pred             HhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCccccccccCCCccchhhhhhhhhhcccCCCCCcCc
Q psy7450          42 LECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQGPETLSIKHQVSEMLSIKHQGPETLSI  121 (161)
Q Consensus        42 ~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  121 (161)
                      .|++ +++|.| .|++.|.....|..|++.|+++++ |.|+.|++.|.+...               | ..|+..|.+++
T Consensus         4 ~h~~-~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~---------------l-~~H~~~h~~~~   64 (110)
T 2csh_A            4 GSSG-DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRP-YGCGVCGKKFKMKHH---------------L-VGHMKIHTGIK   64 (110)
T ss_dssp             CCCC-CCCEEC-TTSCEESSHHHHHHHHHHHSCCCS-EECTTTSCEESSSHH---------------H-HHHHTTTCCCC
T ss_pred             CCCC-CCCEec-cCCCccCCHHHHHHHHHHcCCCcC-ccCCCCCcccCCHHH---------------H-HHHHHHcCCCC
Confidence            4678 999999 999999999999999999999988 999999999998776               6 67888999999


Q ss_pred             ccCCCcccCcCcCCCcchhhccccccccccChhhhh
Q psy7450         122 KHQGPEMLSIKHQGPESAFDLRRNNQAHLNGRKDMM  157 (161)
Q Consensus       122 ~~~c~~c~~~~~~~~~~~f~~~~~l~~H~~~~~~~~  157 (161)
                      +|.|+.|        ++.|..+..|..|++.+....
T Consensus        65 ~~~C~~C--------~~~f~~~~~l~~H~~~~~~~~   92 (110)
T 2csh_A           65 PYECNIC--------AKRFMWRDSFHRHVTSCTKSY   92 (110)
T ss_dssp             CEECSSS--------CCEESCHHHHHHHHHHHHHHH
T ss_pred             CeeCCCC--------cchhcCHHHHHHHHHHccccc
Confidence            9999999        999999999999998765543

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.72  E-value=2.2e-17  Score=97.98  Aligned_cols=71  Identities=28%  Similarity=0.447  Sum_probs=65.8

Q ss_pred             CCccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCcccc
Q psy7450           8 PPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSV   81 (161)
Q Consensus         8 ~~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C   81 (161)
                      ..+... +.++++|.|++|++.|.....|..|+++|++ +++|.|.+|++.|.....|..|+++|++++| |.|
T Consensus         7 ~~~~~~-~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p-~~C   77 (77)
T 2cot_A            7 GRSEWQ-QRERRRYKCDECGKSFSHSSDLSKHRRTHTG-EKPYKCDECGKAFIQRSHLIGHHRVHTGSGP-SSG   77 (77)
T ss_dssp             CCCCSC-CCCSCSSBCSSSCCBCSCHHHHHHHHTTTCC-SCSEECSSSCCEESSHHHHHHHGGGSCCCCC-CCC
T ss_pred             CCCcCc-CCCCCCEECCCCCcccCCHHHHHHHHHHcCC-CcCeeCCCCCCccCCHHHHHHHHHHhCCCCC-CCC
Confidence            344455 7889999999999999999999999999999 9999999999999999999999999999998 987

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.71  E-value=3.1e-18  Score=107.56  Aligned_cols=83  Identities=13%  Similarity=0.115  Sum_probs=76.7

Q ss_pred             CCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCccccccccCCCccchhhhhhhhhhcccCCCCCcCcccCCC
Q psy7450          47 EPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQGPETLSIKHQVSEMLSIKHQGPETLSIKHQGP  126 (161)
Q Consensus        47 ~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~c~  126 (161)
                      +++|.|..|++.|.....|..|+++|+++++ |.|++|++.|.....               | ..|+..|+++++|.|+
T Consensus        15 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~---------------l-~~H~~~h~~~~~~~C~   77 (106)
T 2ee8_A           15 KKEFICKFCGRHFTKSYNLLIHERTHTDERP-YTCDICHKAFRRQDH---------------L-RDHRYIHSKEKPFKCQ   77 (106)
T ss_dssp             CCCCBCSSSCCBCSSHHHHHHHHHHHCCSCC-CBCSSSCCBCSCHHH---------------H-HHHGGGSCCCCTTSCS
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHHcCCCCC-cCCCCccchhCCHHH---------------H-HHHHHHhCCCCCeECC
Confidence            7899999999999999999999999999988 999999999997766               6 6688889999999999


Q ss_pred             cccCcCcCCCcchhhccccccccccChh
Q psy7450         127 EMLSIKHQGPESAFDLRRNNQAHLNGRK  154 (161)
Q Consensus       127 ~c~~~~~~~~~~~f~~~~~l~~H~~~~~  154 (161)
                      .|        ++.|.....|..|++.+.
T Consensus        78 ~C--------~~~f~~~~~L~~H~~~H~   97 (106)
T 2ee8_A           78 EC--------GKGFCQSRTLAVHKTLHM   97 (106)
T ss_dssp             SS--------CCCCSSHHHHHHHHHHTT
T ss_pred             Cc--------CCcccCHHHHHHHHHHhC
Confidence            99        999999999999997654

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.71  E-value=6.6e-19  Score=108.73  Aligned_cols=86  Identities=16%  Similarity=0.044  Sum_probs=77.9

Q ss_pred             cCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCccccccccCCCccchhhhhhhhhhcccCCCCCcCccc
Q psy7450          44 CGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQGPETLSIKHQVSEMLSIKHQGPETLSIKH  123 (161)
Q Consensus        44 ~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  123 (161)
                      .+ +++|.|.+|++.|.....|..|+++|+++++ |.|+.|++.|.....               | ..|+..|.++++|
T Consensus         4 ~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~---------------l-~~H~~~h~~~~~~   65 (96)
T 2dmd_A            4 GS-SGPHKCEVCGKCFSRKDKLKTHMRCHTGVKP-YKCKTCDYAAADSSS---------------L-NKHLRIHSDERPF   65 (96)
T ss_dssp             CC-CCCCCBTTTTBCCCCHHHHHHHGGGCCCCCS-EECSSSCCEESSHHH---------------H-HHHHHHSCCCCCE
T ss_pred             CC-CcCeECCCCCCccCCHHHHHHHHHhcCCCCC-EeCCCCCCccCCHHH---------------H-HHHHHHhCCCCCc
Confidence            45 8899999999999999999999999999888 999999999997766               5 6677788899999


Q ss_pred             CCCcccCcCcCCCcchhhccccccccccChhh
Q psy7450         124 QGPEMLSIKHQGPESAFDLRRNNQAHLNGRKD  155 (161)
Q Consensus       124 ~c~~c~~~~~~~~~~~f~~~~~l~~H~~~~~~  155 (161)
                      .|+.|        ++.|.....|..|++.+..
T Consensus        66 ~C~~C--------~~~f~~~~~l~~H~~~h~~   89 (96)
T 2dmd_A           66 KCQIC--------PYASRNSSQLTVHLRSHTG   89 (96)
T ss_dssp             ECSSS--------SCEESSHHHHHHHHTTCCS
T ss_pred             cCCCC--------CCccCCHHHHHHHHHHhcC
Confidence            99999        9999999999999987643

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.71  E-value=6.5e-19  Score=107.44  Aligned_cols=84  Identities=19%  Similarity=0.203  Sum_probs=75.4

Q ss_pred             CCCeecC--CcCCccCchHHHHHHHHhhCCCCCccccCCCCCccccccccCCCccchhhhhhhhhhcccCCCCCcCcccC
Q psy7450          47 EPRYQCP--HCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQGPETLSIKHQVSEMLSIKHQGPETLSIKHQ  124 (161)
Q Consensus        47 ~k~~~C~--~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  124 (161)
                      +++|.|.  .|++.|.....|..|+++|+++++ |.|+.|++.|.+...               | ..|+..|+++++|.
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~---------------l-~~H~~~h~~~~~~~   64 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKP-FQCRICMRNFSRSDH---------------L-TTHIRTHTGEKPFA   64 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCC-EECTTTCCEESCHHH---------------H-HHHHHHHHCCCCEE
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCC-ccCCCCCcccCCHHH---------------H-HHHHHHcCCCCCcc
Confidence            6899998  699999999999999999999988 999999999997766               5 56777788899999


Q ss_pred             CCcccCcCcCCCcchhhccccccccccChhh
Q psy7450         125 GPEMLSIKHQGPESAFDLRRNNQAHLNGRKD  155 (161)
Q Consensus       125 c~~c~~~~~~~~~~~f~~~~~l~~H~~~~~~  155 (161)
                      |+.|        ++.|..+..|..|++.+..
T Consensus        65 C~~C--------~~~f~~~~~l~~H~~~H~~   87 (90)
T 1a1h_A           65 CDIC--------GRKFARSDERKRHTKIHLR   87 (90)
T ss_dssp             CTTT--------CCEESSHHHHHHHHGGGGC
T ss_pred             CCCC--------CchhCCHHHHHHHHHHhcc
Confidence            9999        9999999999999987654

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.70  E-value=3.5e-18  Score=96.64  Aligned_cols=58  Identities=14%  Similarity=0.088  Sum_probs=53.2

Q ss_pred             CCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCccccccccCCCccchhhhhhhhhhcccCCCCCcCc
Q psy7450          47 EPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQGPETLSIKHQVSEMLSIKHQGPETLSI  121 (161)
Q Consensus        47 ~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  121 (161)
                      |+||.|.+||++|...+.|..|+++|++++| |.|++||++|...+.               | ..|+++|+++.
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp-~~C~~C~k~F~~~~~---------------L-~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRP-RSCPECGKCFRDQSE---------------V-NRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCC-EECTTTCCEESSHHH---------------H-HHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcC-eECCCCCCCcCCHHH---------------H-HHHhCccCCCC
Confidence            7999999999999999999999999999998 999999999998887               6 67888888763

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.70  E-value=8.3e-18  Score=102.26  Aligned_cols=74  Identities=23%  Similarity=0.395  Sum_probs=69.5

Q ss_pred             Cccccccc--ccccccCHHHHHHHHHHhcCCCCCeecC--CcCCccCchHHHHHHHHhhCCCCCccccCCCCCccccccc
Q psy7450          18 QFRYTCDS--CGKVYKLKRSLYRHRTLECGKEPRYQCP--HCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKH   93 (161)
Q Consensus        18 ~k~~~C~~--C~~~f~~~~~l~~H~~~h~~~~k~~~C~--~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~~~~   93 (161)
                      .++|.|..  |++.|.....|..|++.|.+ +++|.|.  .|++.|.....|..|+++|+++++ |.|+.|++.|.+.+.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~   80 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTG-EKPYHCDWDGCGWKFARSDELTRHYRKHTGHRP-FQCQKCDRAFSRSDH   80 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCS-SCCEECCSTTTCCEESSHHHHHHHHHHHHCCCC-EECSSSSCEESSHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCC-CCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCC-ccCCCCCcccCCHHH
Confidence            46899999  99999999999999999999 9999997  699999999999999999999998 999999999997766

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.69  E-value=7.7e-19  Score=105.23  Aligned_cols=80  Identities=20%  Similarity=0.208  Sum_probs=73.1

Q ss_pred             CeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCccccccccCCCccchhhhhhhhhhcccCCCCCcCcccCCCcc
Q psy7450          49 RYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQGPETLSIKHQVSEMLSIKHQGPETLSIKHQGPEM  128 (161)
Q Consensus        49 ~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~c~~c  128 (161)
                      ||.|..|++.|.....|..|+++|.++++ |.|+.|++.|.+...               | ..|+..|+++++|.|+.|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~---------------l-~~H~~~h~~~~~~~C~~C   63 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRP-YPCQYCGKRFHQKSD---------------M-KKHTFIHTGEKPHKCQVC   63 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCC-EECSSSCCEESSHHH---------------H-HHHHHHHHTCCCEECTTT
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCC-eeCCcCChhhCCHHH---------------H-HHHHHHhcCCCCCcCCCc
Confidence            68999999999999999999999999888 999999999987766               5 567777888999999999


Q ss_pred             cCcCcCCCcchhhccccccccccCh
Q psy7450         129 LSIKHQGPESAFDLRRNNQAHLNGR  153 (161)
Q Consensus       129 ~~~~~~~~~~~f~~~~~l~~H~~~~  153 (161)
                              ++.|..+.+|..|++.+
T Consensus        64 --------~~~f~~~~~l~~H~~~H   80 (82)
T 2kmk_A           64 --------GKAFSQSSNLITHSRKH   80 (82)
T ss_dssp             --------SCEESSHHHHHHHHHHH
T ss_pred             --------chhhCChHHHHHHHHhh
Confidence                    99999999999998765

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.69  E-value=1.7e-17  Score=102.99  Aligned_cols=76  Identities=22%  Similarity=0.325  Sum_probs=70.5

Q ss_pred             CCCccccccc--ccccccCHHHHHHHHHHhcCCCCCeecC--CcCCccCchHHHHHHHHhhCCCCCccccCCCCCccccc
Q psy7450          16 LLQFRYTCDS--CGKVYKLKRSLYRHRTLECGKEPRYQCP--HCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSI   91 (161)
Q Consensus        16 ~~~k~~~C~~--C~~~f~~~~~l~~H~~~h~~~~k~~~C~--~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~~   91 (161)
                      ...++|.|..  |++.|.....|..|++.|.+ +++|.|.  .|++.|.....|..|+++|+++++ |.|+.|++.|...
T Consensus        11 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~   88 (100)
T 2ebt_A           11 EKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTG-EKPYKCTWEGCDWRFARSDELTRHYRKHTGAKP-FQCGVCNRSFSRS   88 (100)
T ss_dssp             CSCCCEECCSSSCCCEESCHHHHHHHHHHHSC-CCCEECCSSSCCCEESSHHHHHHHHHHHTSCCS-CBCSSSCCBCSSH
T ss_pred             ccCcceEcCCCCCCCcccCHHHHHHHHHHhCC-CCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCC-eECCCCcCccCCH
Confidence            4457899996  99999999999999999999 9999996  699999999999999999999998 9999999999876


Q ss_pred             cc
Q psy7450          92 KH   93 (161)
Q Consensus        92 ~~   93 (161)
                      ..
T Consensus        89 ~~   90 (100)
T 2ebt_A           89 DH   90 (100)
T ss_dssp             HH
T ss_pred             HH
Confidence            66

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.68  E-value=1.1e-16  Score=94.99  Aligned_cols=71  Identities=17%  Similarity=0.271  Sum_probs=63.9

Q ss_pred             CCCCccccCCCCCcccccccccccccCHHHHHHHHH-HhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCC
Q psy7450           6 NLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRT-LECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPE   77 (161)
Q Consensus         6 ~l~~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~-~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~   77 (161)
                      +|..|+++ |++++||.|++|++.|.....|..|++ .|.+.+++|.|..|++.|...+.|..|++++++...
T Consensus         2 s~~~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~   73 (77)
T 2ct1_A            2 SSGSSGRT-HSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSG   73 (77)
T ss_dssp             CCCCCCCC-CSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSC
T ss_pred             CCCccccc-cCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCC
Confidence            47889999 999999999999999999999999997 576623899999999999999999999999887554

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.68  E-value=4e-18  Score=104.98  Aligned_cols=82  Identities=15%  Similarity=0.118  Sum_probs=73.2

Q ss_pred             cCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCccccccccCCCccchhhhhhhhhhcccCCCCCcC--c
Q psy7450          44 CGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQGPETLSIKHQVSEMLSIKHQGPETLS--I  121 (161)
Q Consensus        44 ~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~  121 (161)
                      ++ +++|.|..|++.|.....|..|+++|+++++ |.|+.|++.|.+...               | ..|++.|.++  +
T Consensus         3 ~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~---------------l-~~H~~~h~~~~~~   64 (95)
T 2yt9_A            3 SG-SSGVACEICGKIFRDVYHLNRHKLSHSGEKP-YSCPVCGLRFKRKDR---------------M-SYHVRSHDGSVGK   64 (95)
T ss_dssp             CC-CSCEECSSSCCEESSSHHHHHHHHHSCSSCS-EECSSSCCEESCHHH---------------H-HHHHHHHCCCCCS
T ss_pred             CC-CCCeECCCCCCccCChHHHHHHHHhcCCCCC-CcCCCCCCccCCHHH---------------H-HHHHHHhcCCCCC
Confidence            45 8899999999999999999999999999888 999999999997766               5 5566666665  8


Q ss_pred             ccCCCcccCcCcCCCcchhhcccccccccc
Q psy7450         122 KHQGPEMLSIKHQGPESAFDLRRNNQAHLN  151 (161)
Q Consensus       122 ~~~c~~c~~~~~~~~~~~f~~~~~l~~H~~  151 (161)
                      +|.|+.|        ++.|..+..|..|++
T Consensus        65 ~~~C~~C--------~~~f~~~~~L~~H~~   86 (95)
T 2yt9_A           65 PYICQSC--------GKGFSRPDHLNGHIK   86 (95)
T ss_dssp             SBCCSSS--------CCCBSSHHHHHHHHH
T ss_pred             ceECCCc--------cchhCCHHHHHHHHH
Confidence            9999999        999999999999985

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.68  E-value=1.2e-16  Score=93.99  Aligned_cols=62  Identities=29%  Similarity=0.545  Sum_probs=60.2

Q ss_pred             CCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCC
Q psy7450          15 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPE   77 (161)
Q Consensus        15 h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~   77 (161)
                      +.++++|.|..|++.|.....|..|+++|++ +++|.|..|++.|...+.|..|+++|++++|
T Consensus        12 ~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp   73 (74)
T 2lce_A           12 THSDKPYKCDRCQASFRYKGNLASHKTVHTG-EKPYRCNICGAQFNRPANLKTHTRIHSGEKP   73 (74)
T ss_dssp             CCCCCSBCCTTSSCCBSCHHHHHHHHHHHCC-CCSEECTTTCCEESCHHHHHHHHHHHCCSCC
T ss_pred             cCCCCCeECCCCCceeCCHHHHHHHHHHcCC-CCCEECCCCCchhCCHHHHHHHHHhcCCCCC
Confidence            7889999999999999999999999999999 9999999999999999999999999999887

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.68  E-value=2.8e-17  Score=102.07  Aligned_cols=75  Identities=17%  Similarity=0.153  Sum_probs=68.5

Q ss_pred             CCCCCCCCccccCCCCCccccccccccccc-CHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCC
Q psy7450           2 FSEFNLPPHTLFNPLLQFRYTCDSCGKVYK-LKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPE   77 (161)
Q Consensus         2 ~~~~~l~~H~~~~h~~~k~~~C~~C~~~f~-~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~   77 (161)
                      .....+..|+++ |.++++|.|..|++.|. ....|..|+++|++.+++|.|.+|++.|.....|..|+++|+++++
T Consensus         7 ~~~~~~~~h~~~-h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp   82 (98)
T 2gqj_A            7 GPGGPEEQWQRA-IHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKP   82 (98)
T ss_dssp             CCCCSCSHHHHT-TTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCS
T ss_pred             CCCCcHHHHHHH-hccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            345667889999 99999999999999999 9999999999987535799999999999999999999999999987

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.68  E-value=3.1e-17  Score=102.48  Aligned_cols=70  Identities=14%  Similarity=0.189  Sum_probs=64.4

Q ss_pred             CCCCcccccccccccccCHHHHHHHHH-Hh---cCCCCCeecCCcCCccCchHHHHHH-HHhhCCCCCccccCCCCC
Q psy7450          15 PLLQFRYTCDSCGKVYKLKRSLYRHRT-LE---CGKEPRYQCPHCPYRGKQKVHLKTH-VAIKHQGPEMLSVKHQGP   86 (161)
Q Consensus        15 h~~~k~~~C~~C~~~f~~~~~l~~H~~-~h---~~~~k~~~C~~C~~~f~~~~~l~~H-~r~h~~~~~~~~C~~C~k   86 (161)
                      -+|++||.|+.|++.|...+.|..|++ .|   .+ ++||.|.+||+.|...+.|..| +++|++++| |.|.++..
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~-ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekp-y~C~~~~~   87 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVL-NSSYVCVECNFLTKRYDALSEHNLKYHPGEEN-FKLTMVKR   87 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCC-SCCEEETTTTEEESSTHHHHTHHHHTSTTCCC-EEEEECCC
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCC-CCCcCCCCCCcccCCHHHHHHHHHHhcCCCCC-eeCCcccC
Confidence            578999999999999999999999997 58   56 8999999999999999999999 899999998 99998553

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.67  E-value=5.8e-19  Score=107.50  Aligned_cols=70  Identities=17%  Similarity=0.274  Sum_probs=47.2

Q ss_pred             CcccccccccccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCcccc
Q psy7450          18 QFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLS   90 (161)
Q Consensus        18 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~   90 (161)
                      ++||.|+.|++.|.....|..|+++|++ +++|.|..|++.|...+.|..|+++|++ .+ |.|+.|++.|.+
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~-~~c~~C~~~f~~   70 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTG-EKPFACDICGRKFARSDERKRHRDIQHI-LP-ILEDKVEELLSK   70 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC-CCCEECTTTCCEESSHHHHHHHHHHHTH-HH-HHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCC-CCCccCCCCCCccCCHHHHHHHHHHhCC-Cc-chHHHHHHHHHH
Confidence            3567777777777777777777777777 7777777777777777777777776663 22 555544444443

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=1.6e-16  Score=93.01  Aligned_cols=67  Identities=27%  Similarity=0.467  Sum_probs=62.4

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCC
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPE   77 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~   77 (161)
                      .+.++ |++++||.|+.|++.|.....|..|+++|++ +++|.|.+|++.|.....|..|+++|+++.+
T Consensus         4 ~~~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~   70 (72)
T 1x6e_A            4 GSSGI-HSGEKPYGCVECGKAFSRSSILVQHQRVHTG-EKPYKCLECGKAFSQNSGLINHQRIHTSGPS   70 (72)
T ss_dssp             CCCCT-TTTCCCEECSSSCCEESSHHHHHHHHHGGGC-SCCEECSSSCCEESSHHHHHHHHHHHHSSSS
T ss_pred             CCCcc-cCCCCCccCCCCCCccCCHHHHHHHHHhcCC-CCCeECCCCCcccCCHHHHHHHHHhcCCCCC
Confidence            34567 9999999999999999999999999999999 9999999999999999999999999987653

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.65  E-value=2.3e-16  Score=91.79  Aligned_cols=62  Identities=21%  Similarity=0.417  Sum_probs=60.1

Q ss_pred             CCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCC
Q psy7450          15 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPE   77 (161)
Q Consensus        15 h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~   77 (161)
                      |+++++|.|..|++.|.....|..|+++|++ +++|.|.+|++.|.....|..|+++|+++++
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCT-DRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCC-SCSEECSSSSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCC-CCCEeCCCCCCccCCHHHHHHHHHHHhCCCC
Confidence            7899999999999999999999999999999 9999999999999999999999999999887

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.65  E-value=8.7e-18  Score=102.24  Aligned_cols=70  Identities=19%  Similarity=0.191  Sum_probs=55.4

Q ss_pred             CCCCCCCCCccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhC
Q psy7450           1 MFSEFNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKH   73 (161)
Q Consensus         1 f~~~~~l~~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~   73 (161)
                      |.+...|..|+.+ |.+++||.|+.|++.|.....|..|+..+++  .+|.|..|++.|.....|..|++.++
T Consensus        13 f~~~~~L~~H~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~--~~~~c~~C~~~f~~~~~L~~H~~~~h   82 (88)
T 1llm_C           13 FSRSDHLTTHIRT-HTGEKPFACDICGRKFARSDERKRHRDIQHI--LPILEDKVEELLSKNYHLENEVARLK   82 (88)
T ss_dssp             ESCHHHHHHHHHH-HHCCCCEECTTTCCEESSHHHHHHHHHHHTH--HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHH-cCCCCCccCCCCCCccCCHHHHHHHHHHhCC--CcchHHHHHHHHHHHhhhHHHHHHHH
Confidence            3455567788888 8888888888888888888888888887764  67888888888888888888887655

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.63  E-value=5.4e-18  Score=106.80  Aligned_cols=83  Identities=13%  Similarity=0.047  Sum_probs=73.6

Q ss_pred             HHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCccccccccCCCccchhhhhhhhhhcccCCCCCc
Q psy7450          40 RTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQGPETLSIKHQVSEMLSIKHQGPETL  119 (161)
Q Consensus        40 ~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  119 (161)
                      ++.|++ +++|.|.+|++.|.....|..|+++|.  ++ |.|++|++.|.....               | ..|+. |++
T Consensus         8 ~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~-~~C~~C~~~f~~~~~---------------l-~~H~~-H~~   66 (107)
T 1wjp_A            8 ASPVEN-KEVYQCRLCNAKLSSLLEQGSHERLCR--NA-AVCPYCSLRFFSPEL---------------K-QEHES-KCE   66 (107)
T ss_dssp             CCCCCC-CCCCBCTTTCCBCSSHHHHHHHHHHHH--HS-BCCTTTCCCBSSHHH---------------H-HHHHH-HCS
T ss_pred             CcccCC-CcCeECCCCCCccCCHHHHHHHHHHCC--CC-ccCCCCCCccCCHHH---------------H-HHHHH-cCC
Confidence            356788 999999999999999999999999983  56 999999999987666               5 45664 889


Q ss_pred             CcccCCCcccCcCcCCCcchhhcccccccccc
Q psy7450         120 SIKHQGPEMLSIKHQGPESAFDLRRNNQAHLN  151 (161)
Q Consensus       120 ~~~~~c~~c~~~~~~~~~~~f~~~~~l~~H~~  151 (161)
                      +++|.|+.|        ++.|..+.+|..|++
T Consensus        67 ~~~~~C~~C--------~~~f~~~~~L~~H~~   90 (107)
T 1wjp_A           67 YKKLTCLEC--------MRTFKSSFSIWRHQV   90 (107)
T ss_dssp             TGGGEEGGG--------TEECSSHHHHHHHHH
T ss_pred             CCCccCccc--------cchhCCHHHHHHHHH
Confidence            999999999        999999999999996

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.62  E-value=8.6e-16  Score=92.77  Aligned_cols=64  Identities=19%  Similarity=0.259  Sum_probs=57.2

Q ss_pred             cccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHH-hhCCCC
Q psy7450          11 TLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVA-IKHQGP   76 (161)
Q Consensus        11 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r-~h~~~~   76 (161)
                      +.+ +...++|.|++|++.|.....|..|+++|++ ++||.|.+|++.|...+.|.+|++ +|.++.
T Consensus        20 ~~~-~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           20 LGL-SASAECHLCPVCGESFASKGAQERHLRLLHA-AQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CSS-CCCCTTEECTTSCCEESSHHHHHHHHHTTSC-SSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCC-CCCCCCEECCCCCCCcCcHHHHhhhhhhccC-CCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            344 6677899999999999999999999999999 999999999999999999999975 566553

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=1.6e-16  Score=98.33  Aligned_cols=71  Identities=18%  Similarity=0.177  Sum_probs=58.9

Q ss_pred             CCCCccccCCCCCcccccccccccc-cCHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHH-HHhhCCCCCccc
Q psy7450           6 NLPPHTLFNPLLQFRYTCDSCGKVY-KLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTH-VAIKHQGPEMLS   80 (161)
Q Consensus         6 ~l~~H~~~~h~~~k~~~C~~C~~~f-~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H-~r~h~~~~~~~~   80 (161)
                      .|..|+.. +.++++|.|+.|++.| .....|..|+++| + +++|.|.+|++.|...+.|..| +++|++ ++.|.
T Consensus        21 ~~~~~~~~-~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~-~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~-~p~~~   93 (96)
T 2ctd_A           21 LEEQWYLE-IVDKGSVSCPTCQAVGRKTIEGLKKHMENC-K-QEMFTCHHCGKQLRSLAGMKYHVMANHNS-LPSGP   93 (96)
T ss_dssp             HHHHHHHH-HHHTSCEECTTTCSCEESSHHHHHHHHHHH-C-CCCCCCSSSCCCCSSHHHHHHHHHHHTCC-CSSCS
T ss_pred             HHHHHHHH-hcCCCCcCCCCCCCCcccCHHHHHHHHHHH-C-CCCeECCCCCCeeCCHHHHHHHhHHhcCC-CCCCC
Confidence            34556666 7788899999999999 8999999999999 8 8999999999999999999999 787765 44244

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.61  E-value=4e-17  Score=99.18  Aligned_cols=82  Identities=17%  Similarity=0.195  Sum_probs=73.8

Q ss_pred             CCCeecCC--cCCccCchHHHHHHHHhhCCCCCccccC--CCCCccccccccCCCccchhhhhhhhhhcccCCCCCcCcc
Q psy7450          47 EPRYQCPH--CPYRGKQKVHLKTHVAIKHQGPEMLSVK--HQGPEMLSIKHQGPETLSIKHQVSEMLSIKHQGPETLSIK  122 (161)
Q Consensus        47 ~k~~~C~~--C~~~f~~~~~l~~H~r~h~~~~~~~~C~--~C~k~f~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  122 (161)
                      ..+|.|..  |++.|.....|..|+++|+++++ |.|+  .|++.|.+...               | ..|...|+++++
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~~~C~~~f~~~~~---------------l-~~H~~~h~~~~~   65 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKP-YHCDWDGCGWKFARSDE---------------L-TRHYRKHTGHRP   65 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCC-EECCSTTTCCEESSHHH---------------H-HHHHHHHHCCCC
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCC-cCCCCCCCCCccCCHHH---------------H-HHHHHHcCCCCC
Confidence            56899999  99999999999999999999888 9997  69999987766               5 557778889999


Q ss_pred             cCCCcccCcCcCCCcchhhccccccccccCh
Q psy7450         123 HQGPEMLSIKHQGPESAFDLRRNNQAHLNGR  153 (161)
Q Consensus       123 ~~c~~c~~~~~~~~~~~f~~~~~l~~H~~~~  153 (161)
                      |.|+.|        ++.|.....|..|++.+
T Consensus        66 ~~C~~C--------~~~f~~~~~l~~H~~~H   88 (89)
T 2wbs_A           66 FQCQKC--------DRAFSRSDHLALHMKRH   88 (89)
T ss_dssp             EECSSS--------SCEESSHHHHHHHGGGG
T ss_pred             ccCCCC--------CcccCCHHHHHHHHHhh
Confidence            999999        99999999999999754

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.61  E-value=1.1e-15  Score=85.21  Aligned_cols=57  Identities=30%  Similarity=0.578  Sum_probs=50.9

Q ss_pred             CCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCC
Q psy7450          17 LQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQ   74 (161)
Q Consensus        17 ~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~   74 (161)
                      |++||.|..|++.|.....|..|+++|++ ++||.|..|++.|...+.|..|+++|++
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTG-EKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHC-CCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCC-CCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            46899999999999999999999999999 9999999999999999999999999874

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.60  E-value=3.3e-16  Score=94.17  Aligned_cols=69  Identities=26%  Similarity=0.446  Sum_probs=65.1

Q ss_pred             cccc--ccccccccCHHHHHHHHHHhcCCCCCeecCC--cCCccCchHHHHHHHHhhCCCCCccccCC---CCCcccccc
Q psy7450          20 RYTC--DSCGKVYKLKRSLYRHRTLECGKEPRYQCPH--CPYRGKQKVHLKTHVAIKHQGPEMLSVKH---QGPEMLSIK   92 (161)
Q Consensus        20 ~~~C--~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~--C~~~f~~~~~l~~H~r~h~~~~~~~~C~~---C~k~f~~~~   92 (161)
                      ||.|  +.|++.|.....|..|+++|++ +++|.|+.  |++.|...+.|..|+++|++    |.|+.   |++.|.+.+
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~----~~C~~~~~C~~~f~~~~   75 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQ-QLPYECPHEGCDKRFSLPSRLKRHEKVHAG----YPCKKDDSCSFVGKTWT   75 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHT-TCCEECCSTTCCCEESSHHHHHHHHHHHHS----EECCSCSSCCCEESSHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCC-CCCeeCCCCCCcCccCCHHHHHHHHHHhCC----CCCCCCCCCCCccCCHH
Confidence            6899  8999999999999999999999 99999988  99999999999999999998    99999   999998765


Q ss_pred             c
Q psy7450          93 H   93 (161)
Q Consensus        93 ~   93 (161)
                      .
T Consensus        76 ~   76 (85)
T 2j7j_A           76 L   76 (85)
T ss_dssp             H
T ss_pred             H
Confidence            5

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.60  E-value=9.5e-17  Score=99.56  Aligned_cols=83  Identities=14%  Similarity=0.127  Sum_probs=74.5

Q ss_pred             CCCeecCC--cCCccCchHHHHHHHHhhCCCCCccccC--CCCCccccccccCCCccchhhhhhhhhhcccCCCCCcCcc
Q psy7450          47 EPRYQCPH--CPYRGKQKVHLKTHVAIKHQGPEMLSVK--HQGPEMLSIKHQGPETLSIKHQVSEMLSIKHQGPETLSIK  122 (161)
Q Consensus        47 ~k~~~C~~--C~~~f~~~~~l~~H~r~h~~~~~~~~C~--~C~k~f~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  122 (161)
                      .++|.|..  |++.|.....|..|+++|+++++ |.|+  .|++.|.+...               | ..|+..|+++++
T Consensus        13 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~~~C~~~f~~~~~---------------l-~~H~~~h~~~~~   75 (100)
T 2ebt_A           13 RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKP-YKCTWEGCDWRFARSDE---------------L-TRHYRKHTGAKP   75 (100)
T ss_dssp             CCCEECCSSSCCCEESCHHHHHHHHHHHSCCCC-EECCSSSCCCEESSHHH---------------H-HHHHHHHTSCCS
T ss_pred             CcceEcCCCCCCCcccCHHHHHHHHHHhCCCCC-eeCCCCCCCCccCCHHH---------------H-HHHHHHhCCCCC
Confidence            67899996  99999999999999999999988 9996  69999987766               5 567778889999


Q ss_pred             cCCCcccCcCcCCCcchhhccccccccccChh
Q psy7450         123 HQGPEMLSIKHQGPESAFDLRRNNQAHLNGRK  154 (161)
Q Consensus       123 ~~c~~c~~~~~~~~~~~f~~~~~l~~H~~~~~  154 (161)
                      |.|+.|        ++.|..+..|..|++.+.
T Consensus        76 ~~C~~C--------~~~f~~~~~l~~H~~~H~   99 (100)
T 2ebt_A           76 FQCGVC--------NRSFSRSDHLALHMKRHQ   99 (100)
T ss_dssp             CBCSSS--------CCBCSSHHHHHHHHHHHC
T ss_pred             eECCCC--------cCccCCHHHHHHHHHHhC
Confidence            999999        999999999999997653

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=8.2e-16  Score=88.32  Aligned_cols=61  Identities=26%  Similarity=0.494  Sum_probs=56.9

Q ss_pred             ccCCCCCcccccccccccccCHHHHHHHHHH-h-cCCCCCeecCCcCCccCchHHHHHHHHhhCC
Q psy7450          12 LFNPLLQFRYTCDSCGKVYKLKRSLYRHRTL-E-CGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQ   74 (161)
Q Consensus        12 ~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~-h-~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~   74 (161)
                      .+ |++++||.|+.|++.|.....|..|++. | .+ +++|.|+.|++.|...+.|..|++++++
T Consensus         3 ~~-h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~-~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FT-KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRN-VKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CE-EEETTEEECTTTCCEESSHHHHHHHHHHHSSSS-CCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cc-cCCCcceECCCCcchhCCHHHHHHHHHHHcCCC-CcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            45 8899999999999999999999999988 6 57 8999999999999999999999999886

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.59  E-value=8.6e-18  Score=98.41  Aligned_cols=72  Identities=15%  Similarity=0.193  Sum_probs=66.4

Q ss_pred             CCCCCCCccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccC
Q psy7450           3 SEFNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVK   82 (161)
Q Consensus         3 ~~~~l~~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~   82 (161)
                      +...|..|+++ |.+++||.|+.|++.|.....|..        +++|.|..|++.|...+.|..|+++|+++++ |.|+
T Consensus         2 ~~~~l~~H~~~-h~~~~~~~C~~C~k~f~~~~~l~~--------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~-~~C~   71 (73)
T 2ctu_A            2 SSGSSGKRQKI-HLGDRSQKCSKCGIIFIRRSTLSR--------RKTPMCEKCRKDSCQEAALNKDEGNESGKKT-SGPS   71 (73)
T ss_dssp             CCCSCCCCCCC-CCCCSEEECSSSCCEEECCCCCCC--------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCC-SSCC
T ss_pred             cchhHHHHHHH-hCCCCCeeCCcccchhCCHHHhCc--------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCC-CCCC
Confidence            56789999999 999999999999999999888764        5789999999999999999999999999998 9999


Q ss_pred             CC
Q psy7450          83 HQ   84 (161)
Q Consensus        83 ~C   84 (161)
                      +|
T Consensus        72 ~C   73 (73)
T 2ctu_A           72 SG   73 (73)
T ss_dssp             CC
T ss_pred             CC
Confidence            87

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.59  E-value=2.7e-15  Score=83.58  Aligned_cols=57  Identities=26%  Similarity=0.512  Sum_probs=54.4

Q ss_pred             ccccccccccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCC
Q psy7450          20 RYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPE   77 (161)
Q Consensus        20 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~   77 (161)
                      ||.|+.|++.|.....|..|+++|++ +++|.|..|++.|...+.|..|+++|+++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kk   57 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTD-VRPYHCTYCNFSFKTKGNLTKHMKSKAHSKK   57 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSS-CCCEECSSSSCEESSHHHHHHHHHSSSSCCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCC-CCCccCCCCCchhcCHHHHHHHHHHhcccCC
Confidence            68999999999999999999999999 9999999999999999999999999998763

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=1.2e-16  Score=96.37  Aligned_cols=76  Identities=18%  Similarity=0.219  Sum_probs=67.7

Q ss_pred             HHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCC---CccccCCCCCccccccccCCCccchhhhhhhhhhcc
Q psy7450          36 LYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGP---EMLSVKHQGPEMLSIKHQGPETLSIKHQVSEMLSIK  112 (161)
Q Consensus        36 l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~---~~~~C~~C~k~f~~~~~~~~~~~~~~~~~~~~l~~~  112 (161)
                      +.+|+++|++ +++|.|.+|++.|.....|..|++.++.+.   .+|.|+.|++.|.....               | ..
T Consensus         3 ~~~H~~~H~~-~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~---------------L-~~   65 (86)
T 1x6h_A            3 SGSSGRTHTG-EKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT---------------M-AR   65 (86)
T ss_dssp             TTCCSTTCCC-CCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHH---------------H-HH
T ss_pred             cccccceecC-CCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHH---------------H-HH
Confidence            4568889999 999999999999999999999999888762   34999999999998777               6 77


Q ss_pred             cCCCCCcCcccCCCcc
Q psy7450         113 HQGPETLSIKHQGPEM  128 (161)
Q Consensus       113 ~~~~~~~~~~~~c~~c  128 (161)
                      |+..|.++.++.|..|
T Consensus        66 H~~~h~~~~~~~~~~~   81 (86)
T 1x6h_A           66 HADNCAGPDGVEGENS   81 (86)
T ss_dssp             HHHHCCCCCSCCCCCC
T ss_pred             HHHHccCCCCcccCCC
Confidence            8899999999999999

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=4.8e-15  Score=86.73  Aligned_cols=68  Identities=22%  Similarity=0.393  Sum_probs=59.6

Q ss_pred             CCCCCccccCCCCCcccccc--cccccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhC
Q psy7450           5 FNLPPHTLFNPLLQFRYTCD--SCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKH   73 (161)
Q Consensus         5 ~~l~~H~~~~h~~~k~~~C~--~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~   73 (161)
                      ..+..|....|.++++|.|+  .|++.|.....|..|+++|.+ +++|.|..|++.|...+.|..|+++|+
T Consensus         4 ~~~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G            4 HPMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTG-QKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             ----CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHC-CCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CCccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCC-CCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            45666776669999999997  599999999999999999999 999999999999999999999999874

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=1.6e-15  Score=89.86  Aligned_cols=65  Identities=22%  Similarity=0.296  Sum_probs=59.7

Q ss_pred             hcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCccccccccCCCccchhhhhhhhhhcccCCCCCcCcc
Q psy7450          43 ECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQGPETLSIKHQVSEMLSIKHQGPETLSIK  122 (161)
Q Consensus        43 h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  122 (161)
                      +.+ +++|.|.+|++.|.....|..|+++|+++++ |.|++|++.|.....               | ..|+++|+++++
T Consensus        13 ~~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~---------------L-~~H~~~H~~~~p   74 (77)
T 2cot_A           13 QRE-RRRYKCDECGKSFSHSSDLSKHRRTHTGEKP-YKCDECGKAFIQRSH---------------L-IGHHRVHTGSGP   74 (77)
T ss_dssp             CCC-SCSSBCSSSCCBCSCHHHHHHHHTTTCCSCS-EECSSSCCEESSHHH---------------H-HHHGGGSCCCCC
T ss_pred             CCC-CCCEECCCCCcccCCHHHHHHHHHHcCCCcC-eeCCCCCCccCCHHH---------------H-HHHHHHhCCCCC
Confidence            456 8999999999999999999999999999988 999999999998777               6 778899999999


Q ss_pred             cCC
Q psy7450         123 HQG  125 (161)
Q Consensus       123 ~~c  125 (161)
                      |.|
T Consensus        75 ~~C   77 (77)
T 2cot_A           75 SSG   77 (77)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            987

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=8.2e-16  Score=91.36  Aligned_cols=72  Identities=15%  Similarity=0.098  Sum_probs=64.6

Q ss_pred             cCCCCCeecCC--cCCccCchHHHHHHHH-hhCCCCCccccCC--CCCccccccccCCCccchhhhhhhhhhcccCCCCC
Q psy7450          44 CGKEPRYQCPH--CPYRGKQKVHLKTHVA-IKHQGPEMLSVKH--QGPEMLSIKHQGPETLSIKHQVSEMLSIKHQGPET  118 (161)
Q Consensus        44 ~~~~k~~~C~~--C~~~f~~~~~l~~H~r-~h~~~~~~~~C~~--C~k~f~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  118 (161)
                      ++ +++|.|..  |++.|.....|..|++ .|.++++ |.|+.  |++.|.+...               | ..|+++|+
T Consensus         3 ~~-~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~-~~C~~~~C~k~f~~~~~---------------L-~~H~~~H~   64 (79)
T 2dlk_A            3 SG-SSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKS-FSCPEPACGKSFNFKKH---------------L-KEHMKLHS   64 (79)
T ss_dssp             SC-CSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCC-EECSCTTTCCEESSHHH---------------H-HHHHHHHH
T ss_pred             CC-CCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCC-eECCCCCCcCccCCHHH---------------H-HHHHHHhC
Confidence            45 78999987  9999999999999999 6888888 99999  9999998777               6 66888899


Q ss_pred             cCcccCCCcccCcCcCCCcchhh
Q psy7450         119 LSIKHQGPEMLSIKHQGPESAFD  141 (161)
Q Consensus       119 ~~~~~~c~~c~~~~~~~~~~~f~  141 (161)
                      ++++|.|+.|        +++|.
T Consensus        65 ~~~~~~C~~C--------~k~F~   79 (79)
T 2dlk_A           65 DTRDYICEFS--------GPSSG   79 (79)
T ss_dssp             TSCCCSCCSS--------SCCCC
T ss_pred             CCCCeeCCCC--------CCCCC
Confidence            9999999999        99984

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=2.3e-15  Score=93.13  Aligned_cols=77  Identities=18%  Similarity=0.191  Sum_probs=65.6

Q ss_pred             ccccCHHHHHHHHHHhcCCCCCeecCCcCCcc-CchHHHHHHHHhhCCCCCccccCCCCCccccccccCCCccchhhhhh
Q psy7450          28 KVYKLKRSLYRHRTLECGKEPRYQCPHCPYRG-KQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQGPETLSIKHQVS  106 (161)
Q Consensus        28 ~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f-~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~~~~~~~~~~~~~~~~~  106 (161)
                      ..|.....|..|++.+.+ +++|.|++|++.| ...+.|..|+++| ++++ |.|.+||+.|...+.             
T Consensus        14 ~~~~~~~~~~~~~~~~~~-~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~-~~C~~Cgk~F~~~~~-------------   77 (96)
T 2ctd_A           14 PVYAAGSLEEQWYLEIVD-KGSVSCPTCQAVGRKTIEGLKKHMENC-KQEM-FTCHHCGKQLRSLAG-------------   77 (96)
T ss_dssp             CSSCTTCHHHHHHHHHHH-TSCEECTTTCSCEESSHHHHHHHHHHH-CCCC-CCCSSSCCCCSSHHH-------------
T ss_pred             CCCCCchHHHHHHHHhcC-CCCcCCCCCCCCcccCHHHHHHHHHHH-CCCC-eECCCCCCeeCCHHH-------------
Confidence            356677788999999999 9999999999999 9999999999999 8887 999999999998777             


Q ss_pred             hhhhccc-CCCCCcCccc
Q psy7450         107 EMLSIKH-QGPETLSIKH  123 (161)
Q Consensus       107 ~~l~~~~-~~~~~~~~~~  123 (161)
                        | ..| +.+|+++..+
T Consensus        78 --L-~~H~~~~H~~~p~~   92 (96)
T 2ctd_A           78 --M-KYHVMANHNSLPSG   92 (96)
T ss_dssp             --H-HHHHHHHTCCCSSC
T ss_pred             --H-HHHhHHhcCCCCCC
Confidence              5 556 6777755443

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.55  E-value=1.7e-14  Score=85.47  Aligned_cols=62  Identities=21%  Similarity=0.337  Sum_probs=55.7

Q ss_pred             CCCCcccccccccccccCHHHHHHHHHHhcC--CCCCeecCCcCCccCchHHHHHHHHhhCCCC
Q psy7450          15 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECG--KEPRYQCPHCPYRGKQKVHLKTHVAIKHQGP   76 (161)
Q Consensus        15 h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~--~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~   76 (161)
                      |++++||.|.+|++.|.....|..|+++|++  .+++|.|.+|++.|...+.|..|++.++...
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~   65 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL   65 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTT
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCC
Confidence            8999999999999999999999999999984  2789999999999999999999996555443

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=1.4e-15  Score=94.86  Aligned_cols=68  Identities=12%  Similarity=0.057  Sum_probs=60.1

Q ss_pred             hcCCCCCeecCCcCCccCchHHHHHHHHh-h---CCCCCccccCCCCCccccccccCCCccchhhhhhhhhhccc-CCCC
Q psy7450          43 ECGKEPRYQCPHCPYRGKQKVHLKTHVAI-K---HQGPEMLSVKHQGPEMLSIKHQGPETLSIKHQVSEMLSIKH-QGPE  117 (161)
Q Consensus        43 h~~~~k~~~C~~C~~~f~~~~~l~~H~r~-h---~~~~~~~~C~~C~k~f~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~  117 (161)
                      -+| ++||.|..|++.|...+.|..|++. |   .++++ |.|+.||++|...+.               | ..| +++|
T Consensus        13 ~~g-ekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekp-f~C~~Cgk~F~~~~~---------------L-~~H~~r~H   74 (102)
T 2ghf_A           13 KKV-EGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSS-YVCVECNFLTKRYDA---------------L-SEHNLKYH   74 (102)
T ss_dssp             CCC-CSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCC-EEETTTTEEESSTHH---------------H-HTHHHHTS
T ss_pred             CCC-CcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCC-cCCCCCCcccCCHHH---------------H-HHHHHHhc
Confidence            467 8999999999999999999999984 7   45666 999999999998877               6 668 7899


Q ss_pred             CcCcccCCCcc
Q psy7450         118 TLSIKHQGPEM  128 (161)
Q Consensus       118 ~~~~~~~c~~c  128 (161)
                      ++++||.|..+
T Consensus        75 tgekpy~C~~~   85 (102)
T 2ghf_A           75 PGEENFKLTMV   85 (102)
T ss_dssp             TTCCCEEEEEC
T ss_pred             CCCCCeeCCcc
Confidence            99999999876

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.53  E-value=3.2e-16  Score=94.18  Aligned_cols=77  Identities=16%  Similarity=0.078  Sum_probs=67.9

Q ss_pred             Ceec--CCcCCccCchHHHHHHHHhhCCCCCccccCC--CCCccccccccCCCccchhhhhhhhhhcccCCCCCcCcccC
Q psy7450          49 RYQC--PHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH--QGPEMLSIKHQGPETLSIKHQVSEMLSIKHQGPETLSIKHQ  124 (161)
Q Consensus        49 ~~~C--~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~--C~k~f~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  124 (161)
                      ||.|  +.|++.|...+.|..|+++|+++++ |.|+.  |++.|.+...               | ..|++.|++   |.
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~~~C~~~f~~~~~---------------l-~~H~~~h~~---~~   60 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLP-YECPHEGCDKRFSLPSR---------------L-KRHEKVHAG---YP   60 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCC-EECCSTTCCCEESSHHH---------------H-HHHHHHHHS---EE
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCC-eeCCCCCCcCccCCHHH---------------H-HHHHHHhCC---CC
Confidence            6899  8999999999999999999999988 99988  9999997766               5 456666666   89


Q ss_pred             CCc---ccCcCcCCCcchhhccccccccccCh
Q psy7450         125 GPE---MLSIKHQGPESAFDLRRNNQAHLNGR  153 (161)
Q Consensus       125 c~~---c~~~~~~~~~~~f~~~~~l~~H~~~~  153 (161)
                      |+.   |        ++.|.....|..|++.+
T Consensus        61 C~~~~~C--------~~~f~~~~~l~~H~~~h   84 (85)
T 2j7j_A           61 CKKDDSC--------SFVGKTWTLYLKHVAEC   84 (85)
T ss_dssp             CCSCSSC--------CCEESSHHHHHHHHHHC
T ss_pred             CCCCCCC--------CCccCCHHHHHHHHHhc
Confidence            999   8        99999999999998753

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=3.1e-14  Score=80.09  Aligned_cols=56  Identities=21%  Similarity=0.433  Sum_probs=51.8

Q ss_pred             cccccccccccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHH-HhhCCC
Q psy7450          19 FRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHV-AIKHQG   75 (161)
Q Consensus        19 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~-r~h~~~   75 (161)
                      +||.|+.|++.|.....|..|+++|++ +++|.|..|++.|...+.|..|+ ++|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTN-EKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTS-SCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCC-CCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            589999999999999999999999999 99999999999999999999997 566653

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.50  E-value=7e-16  Score=95.71  Aligned_cols=78  Identities=17%  Similarity=0.136  Sum_probs=65.4

Q ss_pred             cccCHHHHHHHHHHhcCCCCCeecCCcCCccC-chHHHHHHHHhhCC-CCCccccCCCCCccccccccCCCccchhhhhh
Q psy7450          29 VYKLKRSLYRHRTLECGKEPRYQCPHCPYRGK-QKVHLKTHVAIKHQ-GPEMLSVKHQGPEMLSIKHQGPETLSIKHQVS  106 (161)
Q Consensus        29 ~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~-~~~~l~~H~r~h~~-~~~~~~C~~C~k~f~~~~~~~~~~~~~~~~~~  106 (161)
                      .+.....+..|+++|.+ +++|.|.+|++.|. ....|..|+++|++ +++ |.|++|++.|.+...             
T Consensus         5 s~~~~~~~~~h~~~h~~-~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~-~~C~~C~k~F~~~~~-------------   69 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHE-RGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDA-LKCQHCRKQFKSKAG-------------   69 (98)
T ss_dssp             CCCCCCSCSHHHHTTTT-TSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHH-HSCSSSCCCCSCHHH-------------
T ss_pred             CCCCCCcHHHHHHHhcc-CCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCC-EECCCCCCccCCHHH-------------
Confidence            34445567789999999 99999999999999 99999999999998 777 999999999998777             


Q ss_pred             hhhhcccCCCCCcCcccC
Q psy7450         107 EMLSIKHQGPETLSIKHQ  124 (161)
Q Consensus       107 ~~l~~~~~~~~~~~~~~~  124 (161)
                        | ..|++.|+++++..
T Consensus        70 --L-~~H~~~h~~~kp~~   84 (98)
T 2gqj_A           70 --L-NYHTMAEHSAKPSD   84 (98)
T ss_dssp             --H-HHHHHHHSCSCSSC
T ss_pred             --H-HHHHHHHcCCCCCC
Confidence              5 55666666666644

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.48  E-value=6.5e-14  Score=85.89  Aligned_cols=64  Identities=22%  Similarity=0.340  Sum_probs=58.7

Q ss_pred             CcccccccccccccCHHHHHHHHHH-hcCCCCC--------eecCCcCCccCchHHHHHHHHhhCCCCCccccCC
Q psy7450          18 QFRYTCDSCGKVYKLKRSLYRHRTL-ECGKEPR--------YQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   83 (161)
Q Consensus        18 ~k~~~C~~C~~~f~~~~~l~~H~~~-h~~~~k~--------~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~   83 (161)
                      ...+.|..|++.|.....|..|++. |.+ +++        |.|..|++.|.....|..|+++|+++++ |.|+.
T Consensus        23 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~-~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   95 (95)
T 2ej4_A           23 QLSRPKKSCDRTFSTMHELVTHVTMEHVG-GPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKS-GPSSG   95 (95)
T ss_dssp             CSSSSCCCCCCCCSSHHHHHHHHHHTTTC-CTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCC-CSSCC
T ss_pred             cCCCcccccccccCCHHHHHHHHHHhccC-CCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCC-CCCCC
Confidence            3457899999999999999999998 888 777        9999999999999999999999999998 99963

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.48  E-value=7e-15  Score=86.35  Aligned_cols=64  Identities=14%  Similarity=0.202  Sum_probs=56.6

Q ss_pred             HhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCccccccccCCCccchhhhhhhhhhcccCCCCCcCc
Q psy7450          42 LECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQGPETLSIKHQVSEMLSIKHQGPETLSI  121 (161)
Q Consensus        42 ~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  121 (161)
                      .+.+ +++|.|..|++.|.....|..|+++|+++++ |.|+.|++.|.+...               | ..|+++|++++
T Consensus        11 ~~~~-~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~-~~C~~C~k~f~~~~~---------------L-~~H~~~H~~~k   72 (74)
T 2lce_A           11 MTHS-DKPYKCDRCQASFRYKGNLASHKTVHTGEKP-YRCNICGAQFNRPAN---------------L-KTHTRIHSGEK   72 (74)
T ss_dssp             CCCC-CCSBCCTTSSCCBSCHHHHHHHHHHHCCCCS-EECTTTCCEESCHHH---------------H-HHHHHHHCCSC
T ss_pred             ccCC-CCCeECCCCCceeCCHHHHHHHHHHcCCCCC-EECCCCCchhCCHHH---------------H-HHHHHhcCCCC
Confidence            4566 8999999999999999999999999999998 999999999998777               6 66777788877


Q ss_pred             cc
Q psy7450         122 KH  123 (161)
Q Consensus       122 ~~  123 (161)
                      ||
T Consensus        73 p~   74 (74)
T 2lce_A           73 PY   74 (74)
T ss_dssp             CC
T ss_pred             CC
Confidence            65

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.47  E-value=4e-15  Score=96.50  Aligned_cols=72  Identities=19%  Similarity=0.173  Sum_probs=61.2

Q ss_pred             CCccccccccccccc------CHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCcccc
Q psy7450          17 LQFRYTCDSCGKVYK------LKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLS   90 (161)
Q Consensus        17 ~~k~~~C~~C~~~f~------~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~   90 (161)
                      .++++.|++|.+.|.      ....|..|+ .|++ ++||.|.+|++.|...+.|..|+++|  +++ |.|+.||+.|.+
T Consensus        38 ~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~-~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~-~~C~~C~k~f~~  112 (129)
T 2wbt_A           38 EQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKA-ISQFVCPLCLMPFSSSVSLKQHIRYT--EHT-KVCPVCKKEFTS  112 (129)
T ss_dssp             HHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHH-HCSEECTTTCCEESSHHHHHHHHHHT--CCC-CBCTTTCCBCSS
T ss_pred             hhCcccchhhhcccCCCcccCCHHHHHHHH-HhCC-CCCeECCCCCcccCCHhHHHHHHHHC--CCC-CCCCCCCcccCC
Confidence            346678888877665      566677776 5888 99999999999999999999999998  677 999999999998


Q ss_pred             ccc
Q psy7450          91 IKH   93 (161)
Q Consensus        91 ~~~   93 (161)
                      .+.
T Consensus       113 ~~~  115 (129)
T 2wbt_A          113 TDS  115 (129)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            776

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=4.6e-16  Score=90.90  Aligned_cols=70  Identities=13%  Similarity=0.108  Sum_probs=61.7

Q ss_pred             HHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCccccccccCCCccchhhhhhhhhhccc
Q psy7450          34 RSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQGPETLSIKHQVSEMLSIKH  113 (161)
Q Consensus        34 ~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~~~~~~~~~~~~~~~~~~~l~~~~  113 (161)
                      ..|..|+++|.+ +++|.|.+|++.|...+.|..       +++ |.|+.||+.|.+.+.               | ..|
T Consensus         4 ~~l~~H~~~h~~-~~~~~C~~C~k~f~~~~~l~~-------~~~-~~C~~C~~~f~~~~~---------------l-~~H   58 (73)
T 2ctu_A            4 GSSGKRQKIHLG-DRSQKCSKCGIIFIRRSTLSR-------RKT-PMCEKCRKDSCQEAA---------------L-NKD   58 (73)
T ss_dssp             CSCCCCCCCCCC-CSEEECSSSCCEEECCCCCCC-------SSS-CCCHHHHHTCSCCCS---------------S-CCC
T ss_pred             hhHHHHHHHhCC-CCCeeCCcccchhCCHHHhCc-------CCC-CCCCCCChhhcCHHH---------------H-HHH
Confidence            456778889999 999999999999999988875       566 999999999998877               6 678


Q ss_pred             CCCCCcCcccCCCcc
Q psy7450         114 QGPETLSIKHQGPEM  128 (161)
Q Consensus       114 ~~~~~~~~~~~c~~c  128 (161)
                      +++|+++++|.|+.|
T Consensus        59 ~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           59 EGNESGKKTSGPSSG   73 (73)
T ss_dssp             SSCCCCCCCSSCCCC
T ss_pred             HHhhcCCCCCCCCCC
Confidence            999999999999987

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.43  E-value=4.8e-14  Score=85.06  Aligned_cols=50  Identities=18%  Similarity=0.185  Sum_probs=46.1

Q ss_pred             HhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCccccccc
Q psy7450          42 LECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKH   93 (161)
Q Consensus        42 ~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~~~~   93 (161)
                      .+.+ .++|.|++|++.|...+.|.+|+++|++++| |.|++|+++|.+.+.
T Consensus        22 ~~~~-~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~-~~C~~C~k~F~~~~~   71 (85)
T 2lv2_A           22 LSAS-AECHLCPVCGESFASKGAQERHLRLLHAAQV-FPCKYCPATFYSSPG   71 (85)
T ss_dssp             SCCC-CTTEECTTSCCEESSHHHHHHHHHTTSCSSS-EECTTSSCEESSHHH
T ss_pred             CCCC-CCCEECCCCCCCcCcHHHHhhhhhhccCCCc-cCCCCCCCEeCCHHH
Confidence            3455 7899999999999999999999999999998 999999999998877

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.42  E-value=1.6e-14  Score=93.61  Aligned_cols=66  Identities=21%  Similarity=0.197  Sum_probs=59.1

Q ss_pred             CCCCccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCC
Q psy7450           6 NLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGP   76 (161)
Q Consensus         6 ~l~~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~   76 (161)
                      .|..|+ . |++++||.|+.|++.|.....|..|+++|   ++||.|..|++.|...+.|..|+++|++.-
T Consensus        62 ~l~~h~-~-h~~~~~~~C~~C~k~f~~~~~l~~H~~~H---~~~~~C~~C~k~f~~~~~l~~H~~~h~~~~  127 (129)
T 2wbt_A           62 YLYRLL-A-SKAISQFVCPLCLMPFSSSVSLKQHIRYT---EHTKVCPVCKKEFTSTDSALDHVCKKHNIC  127 (129)
T ss_dssp             HHHHHH-H-HHHHCSEECTTTCCEESSHHHHHHHHHHT---CCCCBCTTTCCBCSSHHHHHHHHHHTTCCC
T ss_pred             HHHHHH-H-hCCCCCeECCCCCcccCCHhHHHHHHHHC---CCCCCCCCCCcccCCHHHHHHHHHHHCCcc
Confidence            344555 5 78899999999999999999999999998   578999999999999999999999999753

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=1.9e-13  Score=78.46  Aligned_cols=60  Identities=17%  Similarity=0.289  Sum_probs=55.2

Q ss_pred             CCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecC-CcCCccCchHHHHHHHHhhCCCCC
Q psy7450          15 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP-HCPYRGKQKVHLKTHVAIKHQGPE   77 (161)
Q Consensus        15 h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~-~C~~~f~~~~~l~~H~r~h~~~~~   77 (161)
                      ..+++||.|..|++.|. ...|..|+++ ++ ++||.|. .|++.|...+.|..|+++|....+
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~-~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ-CP-RLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH-CS-SSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH-cC-CcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            46789999999999999 9999999998 88 9999999 999999999999999999876554

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.42  E-value=2.6e-14  Score=83.47  Aligned_cols=51  Identities=16%  Similarity=0.215  Sum_probs=47.6

Q ss_pred             HHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCccccccc
Q psy7450          41 TLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKH   93 (161)
Q Consensus        41 ~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~~~~   93 (161)
                      ++|++ +++|.|.+|++.|.....|..|+++|+++++ |.|+.|++.|.+...
T Consensus         7 ~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~-~~C~~C~~~f~~~~~   57 (72)
T 1x6e_A            7 GIHSG-EKPYGCVECGKAFSRSSILVQHQRVHTGEKP-YKCLECGKAFSQNSG   57 (72)
T ss_dssp             CTTTT-CCCEECSSSCCEESSHHHHHHHHHGGGCSCC-EECSSSCCEESSHHH
T ss_pred             cccCC-CCCccCCCCCCccCCHHHHHHHHHhcCCCCC-eECCCCCcccCCHHH
Confidence            46888 9999999999999999999999999999998 999999999997766

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=2.9e-14  Score=82.78  Aligned_cols=50  Identities=14%  Similarity=0.213  Sum_probs=46.2

Q ss_pred             HhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCccccccc
Q psy7450          42 LECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKH   93 (161)
Q Consensus        42 ~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~~~~   93 (161)
                      ++++ +++|.|.+|++.|.....|..|+++|+++++ |.|++|++.|.....
T Consensus         3 s~~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C~~~f~~~~~   52 (70)
T 1x5w_A            3 SGSS-GHPEKCSECSYSCSSKAALRIHERIHCTDRP-FKCNYCSFDTKQPSN   52 (70)
T ss_dssp             SCCC-CCSEECSSSSCEESSHHHHHHHHGGGCCSCS-EECSSSSCEESSHHH
T ss_pred             CCCC-CCCeECCCCCcccCCHHHHHHHHHHcCCCCC-EeCCCCCCccCCHHH
Confidence            3567 8999999999999999999999999999998 999999999997766

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=3.1e-13  Score=71.86  Aligned_cols=45  Identities=18%  Similarity=0.183  Sum_probs=34.0

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      .|+++ |++++||.|+.|++.|...+.|..|+++|++ ++||.|..|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSS-GSGERPYGCNECGKNFGRHSHLIEHLKRHFR-EKSSGPSSG   46 (46)
T ss_dssp             CCCCC-CSCCCCEECSSSCCEESSHHHHHHHHHHHHS-TTSSCCSCC
T ss_pred             CCCCC-CCCCCCEEccccCcccCCHHHHHHHHHHHcC-CCCCCCCCC
Confidence            56777 7777777777777777777777777777777 777777765

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.38  E-value=5.6e-13  Score=70.86  Aligned_cols=45  Identities=20%  Similarity=0.325  Sum_probs=32.8

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      +|+++ |++++||.|+.|++.|...+.|..|+++|++ ++||.|+.|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSS-GTGEKPYECKECGKAFSQTTHLIQHQRVHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCC-CSSSCSCBCSSSCCBCSCHHHHHHHHHHHSS-CCCSSCCCC
T ss_pred             CCCCc-cCCCCceECCCCCchhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            46666 7777777777777777777777777777777 777777665

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=5.4e-13  Score=70.86  Aligned_cols=45  Identities=20%  Similarity=0.250  Sum_probs=31.4

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      .|+++ |++++||.|+.|++.|...+.|..|+++|++ ++||.|+.|
T Consensus         2 ~H~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSS-GTGEKPFKCDICGKSFCGRSRLNRHSMVHTA-EKPSGPSSG   46 (46)
T ss_dssp             CCCCC-SSSSCSCCCSSSCCCCSSHHHHHHHHHHTTC-CCSSSCCCC
T ss_pred             CCCCC-CCCCCCcCCCcCCchhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            46666 6777777777777777777777777777777 677776655

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=5.2e-13  Score=70.89  Aligned_cols=45  Identities=22%  Similarity=0.327  Sum_probs=32.8

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      +|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|.+|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSS-GTGEKLYNCKECGKSFSRAPCLLKHERLHSG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCC-SSCCCCCCBTTTTBCCSCHHHHHHHHHHCCS-SSCCCCCCC
T ss_pred             CCccc-CCCCCCeECCCCCCccCchHHHHHHHHhcCC-CCCCCCCCC
Confidence            46666 7777777777777777777777777777777 777777665

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=4.9e-13  Score=71.01  Aligned_cols=45  Identities=18%  Similarity=0.246  Sum_probs=29.8

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      +|+++ |++++||.|+.|++.|...+.|..|+++|++ ++||.|.+|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSS-GTGERPHKCNECGKSFIQSAHLIQHQRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCSC-SSCCCSEECSSSCCEESSHHHHHHHHHHHSC-CCTTSSSCC
T ss_pred             CCcCC-cCCCCCeeCCCCChhhCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            45666 6666666666666666666666666666666 666666655

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=6.8e-13  Score=70.44  Aligned_cols=45  Identities=22%  Similarity=0.300  Sum_probs=32.8

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      +|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|.+|
T Consensus         2 ~H~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSS-GTGEKPYKCSDCGKSFTWKSRLRIHQKCHTG-ERHSGPSSG   46 (46)
T ss_dssp             CCCCC-CSSCCSCBCSSSCCBCSSHHHHHHHHHHHSC-CSSCCSCCC
T ss_pred             CCCCC-CCCCCCccCCccChhhCCHHHHHHHHHhcCC-CCCCCCCCC
Confidence            46666 7777777777777777777777777777777 777777665

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=5.5e-13  Score=70.83  Aligned_cols=45  Identities=22%  Similarity=0.307  Sum_probs=32.2

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      +|+++ |++++||.|+.|++.|...+.|..|+++|++ ++||.|+.|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSS-GTGENPYECHECGKAFSRKYQLISHQRTHAG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCC-CCSSCCEECSSSCCEESSHHHHHHHHHHHTT-SCCSCSSCC
T ss_pred             CCCCC-CCCCcCcCCCCCCcccCcHHHHHHHHHHcCC-CCCCCCCCC
Confidence            46666 7777777777777777777777777777777 777777665

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=4.7e-13  Score=71.11  Aligned_cols=45  Identities=22%  Similarity=0.296  Sum_probs=29.1

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      .|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|++|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSS-GTGEKPYECSICGKSFTKKSQLHVHQQIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CSSSC-SSCCCSEECSSSCCEESSHHHHHHHHHTTSS-CCSCCSCCC
T ss_pred             CCCCC-CCCCcCcCCCCCCcccCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            45566 6666666666666666666666666666666 666666654

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=5.2e-13  Score=70.94  Aligned_cols=45  Identities=20%  Similarity=0.323  Sum_probs=30.6

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      +|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|.+|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSS-GTGEKPYECSVCGKAFSHRQSLSVHQRIHSG-KKPSGPSSG   46 (46)
T ss_dssp             CCCCC-CSSCCSEECSSSCCEESSHHHHHHHHGGGSS-CCCSCSSCC
T ss_pred             CccCC-cCCCCCeeCCCcCCccCCHHHHHHHHHHhcC-CCCCCCCCC
Confidence            45666 6666777777777777777777777766766 666666655

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=5.5e-13  Score=70.84  Aligned_cols=45  Identities=16%  Similarity=0.323  Sum_probs=28.2

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      +|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|++|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSS-GTGEKPYICAECGKAFTIRSNLIKHQKIHTK-QKPSGPSSG   46 (46)
T ss_dssp             CSSCT-TSSCCSEECSSSCCEESSHHHHHHHHHHTSC-CCCSSCSCC
T ss_pred             CcccC-CCCCcCeECCCCChhhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            45555 6666666666666666666666666666666 666666554

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=5.8e-13  Score=70.72  Aligned_cols=45  Identities=20%  Similarity=0.316  Sum_probs=33.2

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      .|+++ |++++||.|+.|++.|...+.|..|+++|++ ++||.|++|
T Consensus         2 ~H~~~-H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSS-GTGEKPYKCNECGKVFTQNSHLANHQRIHTG-VKPSGPSSG   46 (46)
T ss_dssp             CCSSC-CCCCCSSEETTTTEECSSHHHHHHHHGGGSC-CCSCSSCCC
T ss_pred             CCCCC-CCCCCCeECCCcChhhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            46666 7777777777777777777777777777777 777777665

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=5.1e-13  Score=70.96  Aligned_cols=45  Identities=27%  Similarity=0.404  Sum_probs=32.0

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      .|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|++|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSS-GTGKKPYKCNECGKVFTQNSHLARHRGIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCC-CSCCSSCBCTTTCCBCSSHHHHHHHGGGTSC-CCCCSCCCC
T ss_pred             CCCcC-CCCCcCeECCCCCCeeCCHHHHHHHhhhcCC-CCCCCCCCC
Confidence            46666 7777777777777777777777777777777 777777665

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=5.3e-13  Score=70.90  Aligned_cols=45  Identities=22%  Similarity=0.324  Sum_probs=32.3

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      +|+++ |++++||.|+.|++.|...+.|..|+++|++ ++||.|.+|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSS-GTGVKPYMCNECGKAFSVYSSLTTHQVIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCSC-SSCCCSEECSSSCCEESCHHHHHHHHHHHHC-CSCCSCCCC
T ss_pred             Ccccc-cCCCcCeECCCCCchhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            46666 7777777777777777777777777777777 777777665

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.36  E-value=5.6e-13  Score=70.80  Aligned_cols=45  Identities=24%  Similarity=0.409  Sum_probs=32.0

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      +|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|++|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSS-GTGEKRYKCNECGKVFSRNSQLSQHQKIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CSCSS-CTTSCCEECSSSCCEESSHHHHHHHHTGGGC-CCCCSSSCC
T ss_pred             CCccC-CCCCcCcCCCCCcchhCCHHHHHHHHHhcCC-CCCCCCCCC
Confidence            46666 7777777777777777777777777777777 777777655

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=5.8e-13  Score=70.08  Aligned_cols=44  Identities=16%  Similarity=0.162  Sum_probs=26.0

Q ss_pred             ccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450          10 HTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus        10 H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      |+++ |++++||.|+.|++.|...+.|..|+++|++ ++||.|..|
T Consensus         1 H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   44 (44)
T 2emx_A            1 GSSG-SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAE-EKPSGPSSG   44 (44)
T ss_dssp             CCCC-CSSCCCEECSSSSCEESSHHHHHHHHHHHTS-SCSCSCCCC
T ss_pred             CCCC-cCCCcCccCCCCCcccCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            3445 5566666666666666666666666666665 556665554

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=5.7e-13  Score=70.78  Aligned_cols=45  Identities=20%  Similarity=0.338  Sum_probs=32.4

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      +|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|++|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSS-GTGERPYICTVCGKAFTDRSNLIKHQKIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCS-CSCCCSEECTTTCCEESSHHHHHHHHHHHHC-SSCSSSCCC
T ss_pred             CCCCC-CCCCCCcCCCCCCchhCCHHHHHHHHHhcCC-CCCCCCCCC
Confidence            46666 7777777777777777777777777777777 777777665

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=6.5e-13  Score=70.50  Aligned_cols=45  Identities=27%  Similarity=0.396  Sum_probs=29.0

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      .|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|.+|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSS-GSGEKPYVCDYCGKAFGLSAELVRHQRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCT-TCCCCSEECSSSCCEESSHHHHHHHHGGGCC-CSCCSSCCC
T ss_pred             CCCCC-CCCCCCeECCCCChhhCCHHHHHHHHHhcCC-CCCCCCCCC
Confidence            45566 6666666666666666666666666666666 666666654

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.36  E-value=5.3e-13  Score=70.89  Aligned_cols=45  Identities=16%  Similarity=0.234  Sum_probs=32.4

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      +|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|+.|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSS-GMGEKTWKCRECDMCFSQASSLRLHQNVHVG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCC-SCCCCCCCCSSSCCCCSSHHHHHHHGGGGSS-SSCSCSSCC
T ss_pred             CCcCc-cCCCcCeECCCCCcccCCHHHHHHHHHHcCC-CCCcCCCCC
Confidence            46666 7777777777777777777777777777777 777777665

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.36  E-value=2.6e-13  Score=75.38  Aligned_cols=44  Identities=18%  Similarity=0.287  Sum_probs=41.6

Q ss_pred             CeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCccccccc
Q psy7450          49 RYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKH   93 (161)
Q Consensus        49 ~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~~~~   93 (161)
                      ||.|..|++.|...+.|..|+++|+++++ |.|+.|++.|.+.+.
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~   44 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRP-YHCTYCNFSFKTKGN   44 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCC-EECSSSSCEESSHHH
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCC-ccCCCCCchhcCHHH
Confidence            68999999999999999999999999988 999999999997766

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=5.3e-13  Score=70.94  Aligned_cols=45  Identities=20%  Similarity=0.293  Sum_probs=31.3

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      +|+++ |++++||.|++|++.|.....|..|+++|++ ++||.|.+|
T Consensus         2 ~H~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSS-GSSTKSHQCHECGRGFTLKSHLNQHQRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCC-CCCSCSEECSSSCCEESSHHHHHHHHTTTSC-SCCSSCCCC
T ss_pred             CCcCC-CCCCCCeECCcCCCccCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            46666 6777777777777777777777777777776 667776665

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=6.6e-13  Score=70.48  Aligned_cols=45  Identities=18%  Similarity=0.251  Sum_probs=32.1

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      +|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|+.|
T Consensus         2 ~H~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSS-GTGEKPHECRECGKSFSFNSQLIVHQRIHTG-ENPSGPSSG   46 (46)
T ss_dssp             CCCCS-CCCCCSCBCTTTCCBCSSHHHHHHHHTTTTT-SCCSCCCCC
T ss_pred             CCccc-cCCCCCeeCCCCCchhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            46666 7777777777777777777777777777777 777777665

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=1.7e-13  Score=81.12  Aligned_cols=49  Identities=18%  Similarity=0.319  Sum_probs=45.2

Q ss_pred             hcCCCCCeecCCcCCccCchHHHHHHHHhhCC---CCCccccCCCCCccccccc
Q psy7450          43 ECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQ---GPEMLSVKHQGPEMLSIKH   93 (161)
Q Consensus        43 h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~---~~~~~~C~~C~k~f~~~~~   93 (161)
                      |++ +++|.|.+|++.|.....|..|+++|++   +++ |.|+.|++.|.....
T Consensus         2 h~~-~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~-~~C~~C~k~f~~~~~   53 (78)
T 2d9h_A            2 SSG-SSGLQCEICGFTCRQKASLNWHQRKHAETVAALR-FPCEFCGKRFEKPDS   53 (78)
T ss_dssp             CCS-CCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCC-EECTTTCCEESSHHH
T ss_pred             CCC-CcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcc-cCCCCCCchhCCHHH
Confidence            678 9999999999999999999999999996   666 999999999997766

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=7.8e-13  Score=70.23  Aligned_cols=45  Identities=20%  Similarity=0.293  Sum_probs=30.6

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      .|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|+.|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSS-GSGEKPYKCSECGKAFHRHTHLNEHRRIHTG-YRPSGPSSG   46 (46)
T ss_dssp             CCCCC-SCCCCSEECSSSCCEESSHHHHHHHHHHHTC-CCSSCSSCC
T ss_pred             CCccc-cCCCcCeECCCCCCeeCChHHHHHHHHHcCC-CCCCCCCCC
Confidence            45666 6666777777777777777777777766766 666766655

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=6.6e-13  Score=70.53  Aligned_cols=45  Identities=22%  Similarity=0.330  Sum_probs=30.2

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      .|+++ |++++||.|+.|++.|...+.|..|+++|++ ++||.|++|
T Consensus         2 ~H~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSS-GSGEKPYKCNECGKVFTQNSHLTNHWRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCC-SSSSCSEECSSSCCEESSHHHHHHHHHHHSS-SSCSSCCCC
T ss_pred             CCccc-CCCCCCEeCCcCCCccCCHHHHHHHHHHHCC-CCCCCCCCC
Confidence            45666 6666667777777777666666666666666 666666655

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=5.6e-13  Score=70.78  Aligned_cols=45  Identities=16%  Similarity=0.186  Sum_probs=28.1

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      .|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|+.|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSS-GTGEKPCKCTECGKAFCWKSQLIMHQRTHVD-DKHSGPSSG   46 (46)
T ss_dssp             CCCCC-CCCCCSEECSSSCCEESSSHHHHHHHHHCCS-CCCSCCCCC
T ss_pred             cCccc-CCCCCCeeCCCCCCccCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            45555 6666666666666666666666666666666 666666554

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=6.1e-13  Score=70.66  Aligned_cols=45  Identities=24%  Similarity=0.395  Sum_probs=31.0

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      .|+++ |++++||.|+.|++.|...+.|..|+++|++ ++||.|.+|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSS-GTGEKPYKCNECGKVFRHNSYLSRHQRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCSS-CCCSSSEECSSSCCEESSHHHHHHHHTTTCC-CCCCSCCCC
T ss_pred             CcccC-CCCCCCeECCCCCchhCChHHHHHHHhhcCC-CCCCCCCCC
Confidence            46666 6677777777777777777777777777766 667766655

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.35  E-value=7.6e-13  Score=70.31  Aligned_cols=45  Identities=20%  Similarity=0.262  Sum_probs=30.5

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      .|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|.+|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2ely_A            2 SSGSS-GTGEKPFKCVECGKGFSRRSALNVHHKLHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCC-CCCCCSBCCSSSCCCBSSTTHHHHHHHHHSC-CSSCSCCCC
T ss_pred             CCCCC-CCCCCCcccCccCcccCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            35666 6666777777777777777777777666666 666666655

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.35  E-value=5.3e-13  Score=70.86  Aligned_cols=45  Identities=20%  Similarity=0.220  Sum_probs=29.8

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      .|+++ |++++||.|+.|++.|...+.|..|+++|++ ++||.|+.|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSS-GTGVKPYGCSQCAKTFSLKSQLIVHQRSHTG-VKPSGPSSG   46 (46)
T ss_dssp             CCCCC-SCCCCSEECSSSSCEESSHHHHHHHGGGSSS-CCCSCCTTC
T ss_pred             ccccC-CCCCCceECCCCCchhCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            45666 6666666666666666666666666666666 666666654

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=6.5e-13  Score=70.50  Aligned_cols=45  Identities=22%  Similarity=0.361  Sum_probs=32.3

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      .|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|.+|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSS-GTGEKPYKCNECGKAFSQTSKLARHQRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CSSCC-CSSCCTTCCTTTCCCCSSHHHHHHHHTTTTT-CSCCCSCCC
T ss_pred             CCCcC-CCCCcCcCCCCCCCccCCHHHHHHHHHhcCC-CCCCCCCCC
Confidence            46666 7777777777777777777777777777777 777777665

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.35  E-value=6.3e-13  Score=74.59  Aligned_cols=45  Identities=13%  Similarity=0.162  Sum_probs=42.4

Q ss_pred             CCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCccccccc
Q psy7450          48 PRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKH   93 (161)
Q Consensus        48 k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~~~~   93 (161)
                      +||.|..|++.|...+.|..|+++|+++++ |.|+.|++.|.+.+.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~   45 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKP-YPCGLCNRAFTRRDL   45 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCS-EECTTTCCEESSHHH
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCC-ccCCCCCCccCCHHH
Confidence            589999999999999999999999999988 999999999997766

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=6.5e-13  Score=70.56  Aligned_cols=45  Identities=24%  Similarity=0.382  Sum_probs=29.3

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      .|+++ |++++||.|+.|++.|...+.|..|+++|++ ++||.|++|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSS-GTGEKPYKCHECGKVFRRNSHLARHQLIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCC-TTCCCCEECTTTCCEESSHHHHHHHHTTTCC-CCCSCCSCC
T ss_pred             CCCcC-CCCCCCeECCCCCchhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            35556 6666666666666666666666666666666 666666654

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.35  E-value=2e-12  Score=75.25  Aligned_cols=57  Identities=25%  Similarity=0.402  Sum_probs=53.0

Q ss_pred             CCCCccccccc--ccccccCHHHHHHHHHHhcCCCCCeecCC--cCCccCchHHHHHHHHhh
Q psy7450          15 PLLQFRYTCDS--CGKVYKLKRSLYRHRTLECGKEPRYQCPH--CPYRGKQKVHLKTHVAIK   72 (161)
Q Consensus        15 h~~~k~~~C~~--C~~~f~~~~~l~~H~~~h~~~~k~~~C~~--C~~~f~~~~~l~~H~r~h   72 (161)
                      ++..++|.|..  |++.|.....|..|+++|++ +++|.|.+  |++.|.....|..|+++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTG-EKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSS-SCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCC-CCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            67889999988  99999999999999999999 99999965  999999999999998765

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.35  E-value=9.7e-13  Score=72.43  Aligned_cols=45  Identities=13%  Similarity=0.128  Sum_probs=28.5

Q ss_pred             hcCCCCCeecCCcCCccCchHHHHHHHH-hhCCCCCccccCCCCCccc
Q psy7450          43 ECGKEPRYQCPHCPYRGKQKVHLKTHVA-IKHQGPEMLSVKHQGPEML   89 (161)
Q Consensus        43 h~~~~k~~~C~~C~~~f~~~~~l~~H~r-~h~~~~~~~~C~~C~k~f~   89 (161)
                      +.+ ++||.|.+|++.|.....|..|++ +|.++++ |.|++|++.|.
T Consensus         7 ~~~-~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~-~~C~~C~k~F~   52 (54)
T 2eps_A            7 GSV-GKPYICQSCGKGFSRPDHLNGHIKQVHTSERP-HKCQVWVSGPS   52 (54)
T ss_dssp             CCS-SCCEECSSSCCEESSHHHHHHHHHHTSCCCCC-CCSSSSCCSSC
T ss_pred             CCC-CCCeECCCCCcccCCHHHHHHHHHHhcCCCCC-ccCCCCCCCCC
Confidence            344 566666666666666666666665 5666665 66666666665

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=8.8e-13  Score=70.06  Aligned_cols=45  Identities=22%  Similarity=0.356  Sum_probs=32.2

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      .|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|.+|
T Consensus         2 ~h~~~-h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2elz_A            2 SSGSS-GSVEKPYKCEDCGKGYNRRLNLDMHQRVHMG-EKTSGPSSG   46 (46)
T ss_dssp             CCCSC-CCCCSSCBCSSSCCBCSSHHHHHHHGGGGGS-CCCCCSCCC
T ss_pred             CCCCC-CCCCCCeeCcccCchhCCHHHHHHHHHhcCC-CCCCCCCCC
Confidence            35666 7777777777777777777777777777777 777777665

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=6e-13  Score=70.73  Aligned_cols=45  Identities=20%  Similarity=0.301  Sum_probs=30.5

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      .|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|++|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSS-GTGGKHFECTECGKAFTRKSTLSMHQKIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCSS-SSSSCCEECSSSCCEESCHHHHHHHGGGTSC-SSCSCCCCC
T ss_pred             ccccc-cCCCCCeECCCCCchhCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            35666 6666777777777777777777777666666 666666654

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=8.5e-13  Score=70.10  Aligned_cols=45  Identities=22%  Similarity=0.287  Sum_probs=32.9

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      .|+++ |+++++|.|+.|++.|.....|..|+++|++ ++||.|.+|
T Consensus         2 ~h~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSS-GSGEKPYGCNECGKTFSQKSILSAHQRTHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCSCC-CCSSCCEEETTTTEEESSHHHHHHHHHHHSS-CCCSSSCCC
T ss_pred             CCCCc-cCCCcCeECCCCCcccCchHHHHHHHHHcCC-CCCCCCCCC
Confidence            46666 7777777777777777777777777777777 777777665

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=8.6e-13  Score=70.07  Aligned_cols=45  Identities=20%  Similarity=0.276  Sum_probs=31.5

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      .|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|++|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2epz_A            2 SSGSS-GTGEKPFDCIDCGKAFSDHIGLNQHRRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCSS-CCCCCSBCCTTTCCCBSSHHHHHHHHTTTTT-CCCCSSCCC
T ss_pred             CCCCC-cCCCCCeECCCCCceeCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            35666 7777777777777777777777777777777 677777665

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=7.2e-13  Score=70.38  Aligned_cols=45  Identities=18%  Similarity=0.286  Sum_probs=31.3

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      .|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|..|
T Consensus         2 ~H~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSS-GSGEKPFKCEECGKRFTQNSQLHSHQRVHTG-EKPSGPSSG   46 (46)
T ss_dssp             CSTTC-CCCCCSEEETTTTEEESSHHHHHHHGGGGSC-CCCSCCCCC
T ss_pred             CcccC-CCCCCCeeCCCCCcccCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            46666 6777777777777777777777777777776 677776655

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=7.5e-13  Score=70.28  Aligned_cols=45  Identities=22%  Similarity=0.218  Sum_probs=31.5

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      +|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|+.|
T Consensus         2 ~H~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSS-GSGEKSHTCDECGKNFCYISALRIHQRVHMG-EKCSGPSSG   46 (46)
T ss_dssp             CCCCC-CCCCSSEECTTTCCEESSHHHHHHHHTTTCC-SCSSCCSCC
T ss_pred             Ccccc-CCCCCCeECCCcCcccCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            46666 7777777777777777777777777777777 677777655

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=1.1e-12  Score=69.74  Aligned_cols=45  Identities=20%  Similarity=0.248  Sum_probs=33.6

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      .|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|++|
T Consensus         2 ~h~~~-h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2ytm_A            2 SSGSS-GTGEKPYKCMECGKAFGDNSSCTQHQRLHTG-QRPSGPSSG   46 (46)
T ss_dssp             CSCCC-CSSCCSSSBTTTTBCCSSHHHHHHHHHHHHS-CCCCCCCCC
T ss_pred             CCCcC-CCCCCCcCCCCCCchhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            35666 7777777777777777777777777777777 777777765

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.34  E-value=7.9e-13  Score=70.17  Aligned_cols=45  Identities=20%  Similarity=0.364  Sum_probs=30.3

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      .|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|.+|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSS-GTGEKPYNCKECGKSFRWASCLLKHQRVHSG-EKPSGPSSG   46 (46)
T ss_dssp             CSCCS-CCCCCSEECSSSCCEESSHHHHHHHGGGGTS-CCCCSTTCC
T ss_pred             CCCCC-CCCCcCeECCccccccCChHHHHHHHHHhCC-CCCCCCCCC
Confidence            35666 6666677777777777776677777666666 666666655

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=4e-13  Score=70.71  Aligned_cols=44  Identities=16%  Similarity=0.178  Sum_probs=40.8

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      |+++|++ ++||.|..|++.|...+.|..|+++|+++++ |.|+.|
T Consensus         1 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   44 (44)
T 2emx_A            1 GSSGSSG-EKPFGCSCCEKAFSSKSYLLVHQQTHAEEKP-SGPSSG   44 (44)
T ss_dssp             CCCCCSS-CCCEECSSSSCEESSHHHHHHHHHHHTSSCS-CSCCCC
T ss_pred             CCCCcCC-CcCccCCCCCcccCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            4567889 9999999999999999999999999999998 999987

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=4.4e-13  Score=71.20  Aligned_cols=44  Identities=20%  Similarity=0.209  Sum_probs=41.5

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      |+++|++ +++|.|..|++.|...+.|..|+++|+++++ |.|++|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2emm_A            3 SGSSGTG-ERPHKCNECGKSFIQSAHLIQHQRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCSCSSC-CCSEECSSSCCEESSHHHHHHHHHHHSCCCT-TSSSCC
T ss_pred             CcCCcCC-CCCeeCCCCChhhCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            5678899 9999999999999999999999999999998 999987

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=5.9e-13  Score=70.71  Aligned_cols=45  Identities=24%  Similarity=0.372  Sum_probs=30.3

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      .|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|+.|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSS-GTGEKPYKCNECGKVFTQNSHLARHRRVHTG-GKPSGPSSG   46 (46)
T ss_dssp             CCCCC-CCCCSSEECSSSCCEESSSHHHHHHTHHHHS-CCCSCSCCC
T ss_pred             CcCcC-CCCCCCeECCcCCchhCCHHHHHHHHHhcCC-CCCCCCCCC
Confidence            45666 6666677777777777766667667666666 666666655

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=1e-12  Score=69.83  Aligned_cols=45  Identities=22%  Similarity=0.254  Sum_probs=29.7

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      .|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|.+|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2ytq_A            2 SSGSS-GAGEKPYGCSECGKAFSSKSYLIIHMRTHSG-EKPSGPSSG   46 (46)
T ss_dssp             CCSSC-SSCCCSCBCSSSCCBCSCHHHHHHHHTTTCC-SCSSCCCCC
T ss_pred             CCCcC-cCCCCCcCCCccChhhCChHHHHHHHHHhCC-CCCCCCCCC
Confidence            35556 6666666666666666666666666666666 666666655

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.34  E-value=4.5e-13  Score=71.22  Aligned_cols=44  Identities=20%  Similarity=0.297  Sum_probs=41.4

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      |+++|++ ++||.|.+|++.|...+.|..|+++|+++++ |.|+.|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2emk_A            3 SGSSGTG-EKPYECKECGKAFSQTTHLIQHQRVHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCCSS-SCSCBCSSSCCBCSCHHHHHHHHHHHSSCCC-SSCCCC
T ss_pred             CCCccCC-CCceECCCCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            5678899 9999999999999999999999999999998 999987

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=1.3e-12  Score=69.42  Aligned_cols=45  Identities=18%  Similarity=0.233  Sum_probs=30.3

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      .|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|..|
T Consensus         2 ~H~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSS-GSREKSHQCRECGEIFFQYVSLIEHQVLHMG-QKNSGPSSG   46 (46)
T ss_dssp             CCSCC-SSCCCCEECTTTCCEESSHHHHHHHHHHHSC-CSCCCTTCC
T ss_pred             Ccccc-cCCCCCEEccccChhhCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            35566 6666677777777777777777777666666 666666655

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=6.4e-13  Score=70.57  Aligned_cols=45  Identities=18%  Similarity=0.237  Sum_probs=41.8

Q ss_pred             HHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          38 RHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        38 ~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      +|+++|++ +++|.|..|++.|...+.|..|+++|+++++ |.|++|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTG-EKPYICAECGKAFTIRSNLIKHQKIHTKQKP-SGPSSG   46 (46)
T ss_dssp             CSSCTTSS-CCSEECSSSCCEESSHHHHHHHHHHTSCCCC-SSCSCC
T ss_pred             CcccCCCC-CcCeECCCCChhhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            36778999 9999999999999999999999999999998 999987

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=9.2e-13  Score=69.96  Aligned_cols=44  Identities=25%  Similarity=0.409  Sum_probs=28.5

Q ss_pred             ccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450          10 HTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus        10 H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      |+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|++|
T Consensus         3 H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2em7_A            3 SGSS-GTGEKPYKCEECGKGFICRRDLYTHHMVHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCS-SSCCCSEECSSSCCEESCHHHHHHHGGGGTT-CCCSSTTCC
T ss_pred             CCCC-CCCCcCccCCCccchhCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            5555 6666666666666666666666666666666 666666654

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=4.6e-13  Score=71.16  Aligned_cols=44  Identities=18%  Similarity=0.258  Sum_probs=41.5

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      |+++|++ ++||.|.+|++.|...+.|..|+++|+++++ |.|++|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2eml_A            3 SGSSGTG-EKPYECSVCGKAFSHRQSLSVHQRIHSGKKP-SGPSSG   46 (46)
T ss_dssp             CCCCCSS-CCSEECSSSCCEESSHHHHHHHHGGGSSCCC-SCSSCC
T ss_pred             ccCCcCC-CCCeeCCCcCCccCCHHHHHHHHHHhcCCCC-CCCCCC
Confidence            5678899 9999999999999999999999999999998 999987

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.33  E-value=1.2e-12  Score=69.58  Aligned_cols=44  Identities=18%  Similarity=0.161  Sum_probs=27.4

Q ss_pred             ccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450          10 HTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus        10 H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      |+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|.+|
T Consensus         3 h~~~-h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2el6_A            3 SGSS-GAGVNPYKCSQCEKSFSGKLRLLVHQRMHTR-EKPSGPSSG   46 (46)
T ss_dssp             SCCS-SCCCCSEECSSSSCEESSHHHHHHHHGGGCC-SSCCSCCCC
T ss_pred             CCCC-CCCCCCeECCCCCcccCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            4555 6666666666666666666666666666666 666666554

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.33  E-value=4.8e-13  Score=71.11  Aligned_cols=44  Identities=14%  Similarity=0.232  Sum_probs=41.3

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      |+++|++ +++|.|.+|++.|...+.|..|+++|+++++ |.|++|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ely_A            3 SGSSGTG-EKPFKCVECGKGFSRRSALNVHHKLHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCCCC-CCSBCCSSSCCCBSSTTHHHHHHHHHSCCSS-CSCCCC
T ss_pred             CCCCCCC-CCCcccCccCcccCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            5677899 9999999999999999999999999999998 999987

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=5.6e-13  Score=70.81  Aligned_cols=44  Identities=20%  Similarity=0.289  Sum_probs=41.4

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      |+++|++ +++|.|..|++.|...+.|..|+++|+++++ |.|++|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTG-EKPYECSICGKSFTKKSQLHVHQQIHTGEKP-SGPSSG   46 (46)
T ss_dssp             SSSCSSC-CCSEECSSSCCEESSHHHHHHHHHTTSSCCS-CCSCCC
T ss_pred             CCCCCCC-CcCcCCCCCCcccCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            6678899 9999999999999999999999999999998 999987

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=1.2e-12  Score=69.49  Aligned_cols=44  Identities=18%  Similarity=0.274  Sum_probs=27.9

Q ss_pred             ccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450          10 HTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus        10 H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      |+++ |++++||.|+.|++.|...+.|..|+++|++ ++||.|.+|
T Consensus         3 h~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2enc_A            3 SGSS-GSGEKPFKCEECGKGFYTNSQCYSHQRSHSG-EKPSGPSSG   46 (46)
T ss_dssp             CSSC-CCCCCSEECSSSCCEESSHHHHHHHHHHSCC-SSCCSSCCC
T ss_pred             CCCC-CCCCCCcCCCCCCCcCCChHHHHHHHHHhCC-CCCCCCCCC
Confidence            5555 6666666666666666666666666666666 666666554

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.33  E-value=2.9e-13  Score=79.95  Aligned_cols=56  Identities=18%  Similarity=0.228  Sum_probs=48.3

Q ss_pred             HHHHHHhcCCCCCeecCCcCCccCchHHHHHHHH-hhCCCCCccccCCCCCccccccc
Q psy7450          37 YRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVA-IKHQGPEMLSVKHQGPEMLSIKH   93 (161)
Q Consensus        37 ~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r-~h~~~~~~~~C~~C~k~f~~~~~   93 (161)
                      .+|+++|++ ++||.|.+|++.|.....|..|++ .|.++.++|.|+.|++.|.+...
T Consensus         4 ~~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~   60 (77)
T 2ct1_A            4 GSSGRTHSG-EKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSD   60 (77)
T ss_dssp             CCCCCCCSC-CCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHH
T ss_pred             CccccccCC-CCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHH
Confidence            457888999 999999999999999999999998 56655334999999999997766

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=4.9e-13  Score=71.04  Aligned_cols=44  Identities=18%  Similarity=0.240  Sum_probs=41.4

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      |+++|++ ++||.|..|++.|...+.|..|+++|+++++ |.|+.|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2emy_A            3 SGSSGTG-ENPYECHECGKAFSRKYQLISHQRTHAGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCCCS-SCCEECSSSCCEESSHHHHHHHHHHHTTSCC-SCSSCC
T ss_pred             CCCCCCC-CcCcCCCCCCcccCcHHHHHHHHHHcCCCCC-CCCCCC
Confidence            5678899 9999999999999999999999999999998 999987

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=5.6e-13  Score=70.81  Aligned_cols=44  Identities=14%  Similarity=0.209  Sum_probs=41.3

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      |+++|++ ++||.|.+|++.|...+.|..|+++|+++++ |.|+.|
T Consensus         3 H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTG-EKPFKCDICGKSFCGRSRLNRHSMVHTAEKP-SGPSSG   46 (46)
T ss_dssp             CCCCSSS-SCSCCCSSSCCCCSSHHHHHHHHHHTTCCCS-SSCCCC
T ss_pred             CCCCCCC-CCCcCCCcCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            5677889 9999999999999999999999999999998 999987

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.32  E-value=1.6e-13  Score=76.25  Aligned_cols=46  Identities=9%  Similarity=0.067  Sum_probs=40.9

Q ss_pred             CCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCccccccc
Q psy7450          47 EPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKH   93 (161)
Q Consensus        47 ~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~~~~   93 (161)
                      +++|.|..|++.|...+.|..|+++|+++++ |.|+.|++.|.....
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~   47 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKP-YKCEFCEYAAAQKTS   47 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCC-EECSSSSCEESSHHH
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCC-cCCCCCcchhCCHHH
Confidence            6899999999999999999999999999998 999999999987665

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=4.7e-13  Score=71.07  Aligned_cols=44  Identities=16%  Similarity=0.197  Sum_probs=41.4

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      |+++|++ ++||.|..|++.|...+.|..|+++|+++++ |.|+.|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTG-EKLYNCKECGKSFSRAPCLLKHERLHSGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCSSC-CCCCCBTTTTBCCSCHHHHHHHHHHCCSSSC-CCCCCC
T ss_pred             CcccCCC-CCCeECCCCCCccCchHHHHHHHHhcCCCCC-CCCCCC
Confidence            5678899 9999999999999999999999999999998 999987

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=4.3e-13  Score=71.25  Aligned_cols=44  Identities=20%  Similarity=0.285  Sum_probs=41.3

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      |+++|++ +++|.|..|++.|...+.|..|+++|+++++ |.|++|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTG-KKPYKCNECGKVFTQNSHLARHRGIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCCSC-CSSCBCTTTCCBCSSHHHHHHHGGGTSCCCC-CSCCCC
T ss_pred             CCcCCCC-CcCeECCCCCCeeCCHHHHHHHhhhcCCCCC-CCCCCC
Confidence            5678899 9999999999999999999999999999998 999987

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=6.9e-13  Score=70.41  Aligned_cols=44  Identities=18%  Similarity=0.182  Sum_probs=41.5

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      |+++|++ ++||.|++|++.|...+.|..|+++|+++++ |.|++|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2eme_A            3 SGSSGSG-EKPYVCDYCGKAFGLSAELVRHQRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCTTCC-CCSEECSSSCCEESSHHHHHHHHGGGCCCSC-CSSCCC
T ss_pred             CCCCCCC-CCCeECCCCChhhCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            6678999 9999999999999999999999999999998 999987

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=4.7e-13  Score=71.11  Aligned_cols=44  Identities=18%  Similarity=0.178  Sum_probs=41.5

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      |+++|++ +++|.|.+|++.|...+.|..|+++|+++++ |.|+.|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2emp_A            3 SGSSGTG-VKPYMCNECGKAFSVYSSLTTHQVIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCSCSSC-CCSEECSSSCCEESCHHHHHHHHHHHHCCSC-CSCCCC
T ss_pred             cccccCC-CcCeECCCCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            6678899 9999999999999999999999999999998 999987

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=6.5e-13  Score=70.52  Aligned_cols=44  Identities=18%  Similarity=0.246  Sum_probs=41.4

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      |+++|++ ++||.|.+|++.|...+.|..|+++|+++++ |.|++|
T Consensus         3 H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2eov_A            3 SGSSGTG-EKPYKCSDCGKSFTWKSRLRIHQKCHTGERH-SGPSSG   46 (46)
T ss_dssp             CCCCCSS-CCSCBCSSSCCBCSSHHHHHHHHHHHSCCSS-CCSCCC
T ss_pred             CCCCCCC-CCCccCCccChhhCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            5678899 9999999999999999999999999999988 999987

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.5e-12  Score=69.15  Aligned_cols=44  Identities=25%  Similarity=0.261  Sum_probs=30.7

Q ss_pred             ccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450          10 HTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus        10 H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      |+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|.+|
T Consensus         3 h~~~-h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2em8_A            3 SGSS-GSGEKPYKCVECGKGYKRRLDLDFHQRVHTG-EKLSGPSSG   46 (46)
T ss_dssp             CCCC-CCSCCSEECSSSCCEESSHHHHHHHHHHHHC-CCCCCSCCC
T ss_pred             CCCC-CCCCCCeECcccCchhCCHHHHHHHHHHHcC-CCCCCCCCC
Confidence            5566 6777777777777777777777777777777 677776665

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.1e-12  Score=69.63  Aligned_cols=45  Identities=20%  Similarity=0.368  Sum_probs=30.0

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      +|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|++|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSS-GTGEKPYRCAECGKAFTDRSNLFTHQKIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCSS-SSCCCSEECSSSCCEESSHHHHHHHHTTTTT-SCCCCTTCC
T ss_pred             CCCCC-CCCCCCeECCCCCchhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            45666 6666677777777777776677777666666 666666543

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=9.8e-13  Score=69.85  Aligned_cols=45  Identities=24%  Similarity=0.308  Sum_probs=32.4

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      .|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|.+|
T Consensus         2 ~H~~~-h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSS-GTGEKPYKCEKCGKGYNSKFNLDMHQKVHTG-ERPSGPSSG   46 (46)
T ss_dssp             CCCCC-CSSCCSEEETTTTEEESCHHHHHHHHTTSCS-CCSSCCSCC
T ss_pred             CCCcC-CCCCCCeECCCCCCccCCHHHHHHHHHhhCC-CCCCCCCCC
Confidence            36666 7777777777777777777777777777777 777777665

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=5.7e-13  Score=70.79  Aligned_cols=44  Identities=23%  Similarity=0.304  Sum_probs=41.3

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      |+++|++ +++|.|..|++.|...+.|..|+++|+++++ |.|++|
T Consensus         3 H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSG-EKPYKCNECGKVFTQNSHLTNHWRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCSSS-SCSEECSSSCCEESSHHHHHHHHHHHSSSSC-SSCCCC
T ss_pred             CcccCCC-CCCEeCCcCCCccCCHHHHHHHHHHHCCCCC-CCCCCC
Confidence            5678899 9999999999999999999999999999998 999987

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=4.7e-13  Score=71.12  Aligned_cols=44  Identities=18%  Similarity=0.249  Sum_probs=41.3

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      |+++|++ ++||.|..|++.|...+.|..|+++|+++++ |.|++|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ene_A            3 SGSSGTG-EKPYKCNECGKVFRHNSYLSRHQRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCSSCCC-SSSEECSSSCCEESSHHHHHHHHTTTCCCCC-CSCCCC
T ss_pred             cccCCCC-CCCeECCCCCchhCChHHHHHHHhhcCCCCC-CCCCCC
Confidence            5678899 9999999999999999999999999999998 999987

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=6.4e-13  Score=70.57  Aligned_cols=44  Identities=20%  Similarity=0.304  Sum_probs=41.4

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      |+++|++ ++||.|.+|++.|...+.|..|+++|+++++ |.|+.|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSG-EKPYKCSECGKAFHRHTHLNEHRRIHTGYRP-SGPSSG   46 (46)
T ss_dssp             CCCCSCC-CCSEECSSSCCEESSHHHHHHHHHHHTCCCS-SCSSCC
T ss_pred             CccccCC-CcCeECCCCCCeeCChHHHHHHHHHcCCCCC-CCCCCC
Confidence            5678899 9999999999999999999999999999998 999987

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=4.6e-13  Score=71.19  Aligned_cols=44  Identities=18%  Similarity=0.271  Sum_probs=41.4

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      |+++|++ ++||.|..|++.|...+.|..|+++|+++++ |.|+.|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2eoo_A            3 SGSSGSG-ERPYGCNECGKNFGRHSHLIEHLKRHFREKS-SGPSSG   46 (46)
T ss_dssp             CCCCCSC-CCCEECSSSCCEESSHHHHHHHHHHHHSTTS-SCCSCC
T ss_pred             CCCCCCC-CCCEEccccCcccCCHHHHHHHHHHHcCCCC-CCCCCC
Confidence            6678899 9999999999999999999999999999998 999987

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=4.3e-13  Score=71.29  Aligned_cols=44  Identities=16%  Similarity=0.240  Sum_probs=41.3

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      |+++|++ ++||.|..|++.|...+.|..|+++|+++++ |.|++|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~c   46 (46)
T 2emf_A            3 SGSSGTG-GKHFECTECGKAFTRKSTLSMHQKIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCSSSSS-SCCEECSSSCCEESCHHHHHHHGGGTSCSSC-SCCCCC
T ss_pred             cccccCC-CCCeECCCCCchhCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            5678889 9999999999999999999999999999998 999987

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.32  E-value=5.3e-13  Score=70.92  Aligned_cols=44  Identities=20%  Similarity=0.302  Sum_probs=41.4

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      |+++|++ +++|.|..|++.|...+.|..|+++|+++++ |.|+.|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~c   46 (46)
T 2ema_A            3 SGSSGTG-EKRYKCNECGKVFSRNSQLSQHQKIHTGEKP-SGPSSG   46 (46)
T ss_dssp             SCSSCTT-SCCEECSSSCCEESSHHHHHHHHTGGGCCCC-CSSSCC
T ss_pred             CccCCCC-CcCcCCCCCcchhCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            5678899 9999999999999999999999999999998 999987

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=5.9e-13  Score=70.68  Aligned_cols=44  Identities=16%  Similarity=0.138  Sum_probs=41.3

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      |+++|++ +++|.|..|++.|...+.|..|+++|+++++ |.|+.|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2epw_A            3 SGSSGTG-EKPCKCTECGKAFCWKSQLIMHQRTHVDDKH-SGPSSG   46 (46)
T ss_dssp             CCCCCCC-CCSEECSSSCCEESSSHHHHHHHHHCCSCCC-SCCCCC
T ss_pred             CcccCCC-CCCeeCCCCCCccCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            5678899 9999999999999999999999999999998 999987

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=5.8e-13  Score=70.78  Aligned_cols=44  Identities=18%  Similarity=0.218  Sum_probs=41.2

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      |+++|++ +++|.|.+|++.|...+.|..|+++|+++++ |.|++|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAG-EKPYGCSECGKAFSSKSYLIIHMRTHSGEKP-SGPSSG   46 (46)
T ss_dssp             CSSCSSC-CCSCBCSSSCCBCSCHHHHHHHHTTTCCSCS-SCCCCC
T ss_pred             CCcCcCC-CCCcCCCccChhhCChHHHHHHHHHhCCCCC-CCCCCC
Confidence            5667899 9999999999999999999999999999998 999987

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=5.2e-13  Score=70.95  Aligned_cols=44  Identities=20%  Similarity=0.303  Sum_probs=41.3

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      |+++|++ ++||.|..|++.|...+.|..|+++|+++++ |.|++|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTG-EKPYKCHECGKVFRRNSHLARHQLIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCTTC-CCCEECTTTCCEESSHHHHHHHHTTTCCCCC-SCCSCC
T ss_pred             CCcCCCC-CCCeECCCCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            5677899 9999999999999999999999999999998 999987

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=5e-13  Score=70.99  Aligned_cols=44  Identities=23%  Similarity=0.285  Sum_probs=41.4

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      |+++|++ +++|.|.+|++.|...+.|..|+++|+++++ |.|+.|
T Consensus         3 H~~~H~~-~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTG-EKPYKCNECGKVFTQNSHLANHQRIHTGVKP-SGPSSG   46 (46)
T ss_dssp             CSSCCCC-CCSSEETTTTEECSSHHHHHHHHGGGSCCCS-CSSCCC
T ss_pred             CCCCCCC-CCCeECCCcChhhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            5678899 9999999999999999999999999999998 999987

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=5.3e-13  Score=70.90  Aligned_cols=44  Identities=16%  Similarity=0.238  Sum_probs=41.2

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      |+++|++ +++|.|.+|++.|...+.|..|+++|+++++ |.|++|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2epz_A            3 SGSSGTG-EKPFDCIDCGKAFSDHIGLNQHRRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCSSCCC-CCSBCCTTTCCCBSSHHHHHHHHTTTTTCCC-CSSCCC
T ss_pred             CCCCcCC-CCCeECCCCCceeCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            5677889 9999999999999999999999999999998 999987

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=4.8e-13  Score=71.07  Aligned_cols=44  Identities=18%  Similarity=0.226  Sum_probs=41.4

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      |+++|++ +++|.|..|++.|...+.|..|+++|+++++ |.|++|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~c   46 (46)
T 2emh_A            3 SGSSGTG-ERPYICTVCGKAFTDRSNLIKHQKIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCSCSC-CCSEECTTTCCEESSHHHHHHHHHHHHCSSC-SSSCCC
T ss_pred             CCCCCCC-CCCcCCCCCCchhCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            5678899 9999999999999999999999999999998 999987

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.32  E-value=3.2e-13  Score=76.60  Aligned_cols=52  Identities=8%  Similarity=0.220  Sum_probs=29.9

Q ss_pred             CCCccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchH
Q psy7450           7 LPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKV   63 (161)
Q Consensus         7 l~~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~   63 (161)
                      |..|+++ |++++||.|+.|++.|.....|.   ++|++ ++||.|..||+.|...+
T Consensus         2 L~~h~~~-H~~~k~~~C~~C~k~F~~~~~l~---~~H~~-~k~~~C~~C~k~f~~~~   53 (62)
T 1vd4_A            2 IETDERD-STNRASFKCPVCSSTFTDLEANQ---LFDPM-TGTFRCTFCHTEVEEDE   53 (62)
T ss_dssp             CCCCSSS-CCSSSEEECSSSCCEEEHHHHHH---HEETT-TTEEBCSSSCCBCEECT
T ss_pred             hhhHHHH-cCCCCCccCCCCCchhccHHHhH---hhcCC-CCCEECCCCCCccccCc
Confidence            4556666 66666666666666665555543   45555 55555555555555443

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=6e-13  Score=70.70  Aligned_cols=45  Identities=20%  Similarity=0.318  Sum_probs=28.7

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      .|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|.+|
T Consensus         2 ~H~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSS-GTGEKPFKCGECGKSYNQRVHLTQHQRVHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCC-CSSCCSEECTTTCCEESSSHHHHTTGGGGSS-CCSSCSCCC
T ss_pred             CCCCC-CCCCCCeECCCCCcccCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            45556 6666666666666666666666666666666 666666554

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.31  E-value=4.8e-13  Score=71.04  Aligned_cols=44  Identities=16%  Similarity=0.157  Sum_probs=41.4

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      |+++|++ ++||.|..|++.|...+.|..|+++|+++++ |.|+.|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2el4_A            3 SGSSGTG-VKPYGCSQCAKTFSLKSQLIVHQRSHTGVKP-SGPSSG   46 (46)
T ss_dssp             CCCCSCC-CCSEECSSSSCEESSHHHHHHHGGGSSSCCC-SCCTTC
T ss_pred             cccCCCC-CCceECCCCCchhCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            5678899 9999999999999999999999999999998 999987

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.31  E-value=5e-13  Score=71.01  Aligned_cols=44  Identities=16%  Similarity=0.234  Sum_probs=41.4

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      |+++|++ ++||.|..|++.|...+.|..|+++|+++++ |.|+.|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2em0_A            3 SGSSGMG-EKTWKCRECDMCFSQASSLRLHQNVHVGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCSCC-CCCCCCSSSCCCCSSHHHHHHHGGGGSSSSC-SCSSCC
T ss_pred             CcCccCC-CcCeECCCCCcccCCHHHHHHHHHHcCCCCC-cCCCCC
Confidence            5678899 9999999999999999999999999999998 999987

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=5.5e-13  Score=70.83  Aligned_cols=44  Identities=18%  Similarity=0.215  Sum_probs=41.2

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      |+++|++ +++|.|.+|++.|...+.|..|+++|+++++ |.|++|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2em7_A            3 SGSSGTG-EKPYKCEECGKGFICRRDLYTHHMVHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCSSSC-CCSEECSSSCCEESCHHHHHHHGGGGTTCCC-SSTTCC
T ss_pred             CCCCCCC-CcCccCCCccchhCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            5667889 9999999999999999999999999999998 999987

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=5.7e-13  Score=70.73  Aligned_cols=44  Identities=16%  Similarity=0.148  Sum_probs=41.3

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      |+++|++ +++|.|..|++.|...+.|..|+++|+++++ |.|+.|
T Consensus         3 H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2eop_A            3 SGSSGTG-EKPHECRECGKSFSFNSQLIVHQRIHTGENP-SGPSSG   46 (46)
T ss_dssp             CCCSCCC-CCSCBCTTTCCBCSSHHHHHHHHTTTTTSCC-SCCCCC
T ss_pred             CccccCC-CCCeeCCCCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            5678899 9999999999999999999999999999998 999987

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=5.6e-13  Score=70.84  Aligned_cols=44  Identities=14%  Similarity=0.236  Sum_probs=41.2

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      |+++|++ ++||.|..|++.|...+.|..|+++|+++++ |.|++|
T Consensus         3 h~~~h~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2elz_A            3 SGSSGSV-EKPYKCEDCGKGYNRRLNLDMHQRVHMGEKT-SGPSSG   46 (46)
T ss_dssp             CCSCCCC-CSSCBCSSSCCBCSSHHHHHHHGGGGGSCCC-CCSCCC
T ss_pred             CCCCCCC-CCCeeCcccCchhCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            5667889 9999999999999999999999999999998 999987

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.7e-12  Score=69.12  Aligned_cols=45  Identities=24%  Similarity=0.286  Sum_probs=31.5

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHH-HhcCCCCCeecCCc
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRT-LECGKEPRYQCPHC   55 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~-~h~~~~k~~~C~~C   55 (161)
                      .|+++ |++++||.|+.|++.|.....|..|++ +|++ ++||.|..|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~-~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSS-GTGKKPYECIECGKAFIQNTSLIRHWRYYHTG-EKPSGPSSG   47 (47)
T ss_dssp             CCCCC-CCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTT-SCSSSCCCC
T ss_pred             ccccc-cCCCCCEECCccCchhCChHHHHHHhHhhcCC-CCCCCCCCC
Confidence            45666 777777777777777777777777776 6777 677777655

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=7.7e-13  Score=70.26  Aligned_cols=44  Identities=11%  Similarity=0.135  Sum_probs=41.1

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      |+++|++ ++||.|.+|++.|...+.|..|+++|+++++ |.|++|
T Consensus         3 h~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2enc_A            3 SGSSGSG-EKPFKCEECGKGFYTNSQCYSHQRSHSGEKP-SGPSSG   46 (46)
T ss_dssp             CSSCCCC-CCSEECSSSCCEESSHHHHHHHHHHSCCSSC-CSSCCC
T ss_pred             CCCCCCC-CCCcCCCCCCCcCCChHHHHHHHHHhCCCCC-CCCCCC
Confidence            4667889 9999999999999999999999999999988 999987

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=5.9e-13  Score=70.77  Aligned_cols=44  Identities=18%  Similarity=0.172  Sum_probs=41.4

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      |+++|++ +++|.|.+|++.|...+.|..|+++|+++++ |.|++|
T Consensus         3 H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2em5_A            3 SGSSGSS-TKSHQCHECGRGFTLKSHLNQHQRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCCCC-SCSEECSSSCCEESSHHHHHHHHTTTSCSCC-SSCCCC
T ss_pred             CcCCCCC-CCCeECCcCCCccCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            6678899 9999999999999999999999999999998 999987

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=8.1e-13  Score=70.17  Aligned_cols=44  Identities=18%  Similarity=0.101  Sum_probs=41.2

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      |+++|++ ++||.|.+|++.|...+.|..|+++|+++++ |.|+.|
T Consensus         3 H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2yso_A            3 SGSSGSR-EKSHQCRECGEIFFQYVSLIEHQVLHMGQKN-SGPSSG   46 (46)
T ss_dssp             CSCCSSC-CCCEECTTTCCEESSHHHHHHHHHHHSCCSC-CCTTCC
T ss_pred             cccccCC-CCCEEccccChhhCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            5677899 9999999999999999999999999999998 999987

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.31  E-value=6.4e-13  Score=70.53  Aligned_cols=44  Identities=16%  Similarity=0.206  Sum_probs=41.4

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      |+++|++ ++||.|..|++.|...+.|..|+++|+++++ |.|++|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2em9_A            3 SGSSGTG-EKPYNCKECGKSFRWASCLLKHQRVHSGEKP-SGPSSG   46 (46)
T ss_dssp             SCCSCCC-CCSEECSSSCCEESSHHHHHHHGGGGTSCCC-CSTTCC
T ss_pred             CCCCCCC-CcCeECCccccccCChHHHHHHHHHhCCCCC-CCCCCC
Confidence            5678899 9999999999999999999999999999998 999987

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=5.9e-13  Score=70.68  Aligned_cols=44  Identities=20%  Similarity=0.263  Sum_probs=41.4

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      |+++|++ +++|.|.+|++.|...+.|..|+++|+++++ |.|++|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTG-EKPYKCNECGKAFSQTSKLARHQRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             SSCCCSS-CCTTCCTTTCCCCSSHHHHHHHHTTTTTCSC-CCSCCC
T ss_pred             CCcCCCC-CcCcCCCCCCCccCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            5678899 9999999999999999999999999999998 999987

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=4.9e-13  Score=71.04  Aligned_cols=44  Identities=23%  Similarity=0.344  Sum_probs=41.4

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      |+++|++ ++||.|..|++.|...+.|..|+++|+++++ |.|+.|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTG-EKPYKCNECGKVFTQNSHLARHRRVHTGGKP-SGPSSG   46 (46)
T ss_dssp             CCCCCCC-CSSEECSSSCCEESSSHHHHHHTHHHHSCCC-SCSCCC
T ss_pred             cCcCCCC-CCCeECCcCCchhCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            5678899 9999999999999999999999999999998 999987

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.30  E-value=9.4e-13  Score=69.94  Aligned_cols=44  Identities=16%  Similarity=0.267  Sum_probs=41.1

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      |+++|++ +++|.|.+|++.|...+.|..|+++|+++++ |.|+.|
T Consensus         3 h~~~h~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2el6_A            3 SGSSGAG-VNPYKCSQCEKSFSGKLRLLVHQRMHTREKP-SGPSSG   46 (46)
T ss_dssp             SCCSSCC-CCSEECSSSSCEESSHHHHHHHHGGGCCSSC-CSCCCC
T ss_pred             CCCCCCC-CCCeECCCCCcccCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            4667889 9999999999999999999999999999998 999987

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.30  E-value=1.6e-13  Score=78.54  Aligned_cols=51  Identities=14%  Similarity=0.130  Sum_probs=45.3

Q ss_pred             HHhcCCCCCeecCCcCCccCchHHHHHHHHh-h-CCCCCccccCCCCCccccccc
Q psy7450          41 TLECGKEPRYQCPHCPYRGKQKVHLKTHVAI-K-HQGPEMLSVKHQGPEMLSIKH   93 (161)
Q Consensus        41 ~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~-h-~~~~~~~~C~~C~k~f~~~~~   93 (161)
                      ++|++ ++||.|..|++.|...+.|..|++. | .++++ |.|+.|++.|.+.+.
T Consensus         3 ~~h~~-~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~-~~C~~C~k~f~~~~~   55 (66)
T 2drp_A            3 FTKEG-EHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKV-YPCPFCFKEFTRKDN   55 (66)
T ss_dssp             CEEEE-TTEEECTTTCCEESSHHHHHHHHHHHSSSSCCC-EECTTTCCEESCHHH
T ss_pred             cccCC-CcceECCCCcchhCCHHHHHHHHHHHcCCCCcC-eECCCCCCccCCHHH
Confidence            46788 9999999999999999999999998 5 36666 999999999987665

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=6.9e-13  Score=70.44  Aligned_cols=44  Identities=20%  Similarity=0.229  Sum_probs=41.3

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      |+++|++ +++|.|.+|++.|...+.|..|+++|+++++ |.|++|
T Consensus         3 h~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2en6_A            3 SGSSGSG-EKPYGCNECGKTFSQKSILSAHQRTHTGEKP-SGPSSG   46 (46)
T ss_dssp             CSCCCCS-SCCEEETTTTEEESSHHHHHHHHHHHSSCCC-SSSCCC
T ss_pred             CCCccCC-CcCeECCCCCcccCchHHHHHHHHHcCCCCC-CCCCCC
Confidence            5677899 9999999999999999999999999999998 999987

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=6.9e-13  Score=70.41  Aligned_cols=44  Identities=14%  Similarity=0.099  Sum_probs=41.3

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      |+++|++ ++||.|..|++.|...+.|..|+++|+++++ |.|+.|
T Consensus         3 H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2en8_A            3 SGSSGSG-EKSHTCDECGKNFCYISALRIHQRVHMGEKC-SGPSSG   46 (46)
T ss_dssp             CCCCCCC-CSSEECTTTCCEESSHHHHHHHHTTTCCSCS-SCCSCC
T ss_pred             ccccCCC-CCCeECCCcCcccCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            5678899 9999999999999999999999999999998 999987

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.30  E-value=2.3e-12  Score=70.93  Aligned_cols=46  Identities=22%  Similarity=0.330  Sum_probs=43.7

Q ss_pred             CCCCcccccccccccccCHHHHHHHHH-HhcCCCCCeecCCcCCccCc
Q psy7450          15 PLLQFRYTCDSCGKVYKLKRSLYRHRT-LECGKEPRYQCPHCPYRGKQ   61 (161)
Q Consensus        15 h~~~k~~~C~~C~~~f~~~~~l~~H~~-~h~~~~k~~~C~~C~~~f~~   61 (161)
                      |++++||.|++|++.|.....|..|++ +|++ ++||.|.+|++.|.+
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~-~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTS-ERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCC-CCCCCSSSSCCSSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCC-CCCccCCCCCCCCCC
Confidence            788999999999999999999999997 8999 999999999999975

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=7.5e-13  Score=70.30  Aligned_cols=45  Identities=18%  Similarity=0.305  Sum_probs=41.9

Q ss_pred             HHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          38 RHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        38 ~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      .|+++|++ +++|.|.+|++.|...+.|..|+++|+++++ |.|+.|
T Consensus         2 ~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSG-EKPFKCEECGKRFTQNSQLHSHQRVHTGEKP-SGPSSG   46 (46)
T ss_dssp             CSTTCCCC-CCSEEETTTTEEESSHHHHHHHGGGGSCCCC-SCCCCC
T ss_pred             CcccCCCC-CCCeeCCCCCcccCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            36778999 9999999999999999999999999999998 999987

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=7.1e-13  Score=70.46  Aligned_cols=44  Identities=14%  Similarity=0.179  Sum_probs=41.1

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      |+++|++ ++||.|.+|++.|...+.|..|+++|+++++ |.|++|
T Consensus         3 h~~~h~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTG-EKPYKCMECGKAFGDNSSCTQHQRLHTGQRP-SGPSSG   46 (46)
T ss_dssp             SCCCCSS-CCSSSBTTTTBCCSSHHHHHHHHHHHHSCCC-CCCCCC
T ss_pred             CCcCCCC-CCCcCCCCCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            4567889 9999999999999999999999999999998 999987

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=3e-12  Score=67.94  Aligned_cols=45  Identities=18%  Similarity=0.265  Sum_probs=31.0

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      .|+++ |+++++|.|+.|++.|.....|..|+++|++ ++||.|++|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~~   46 (46)
T 2em2_A            2 SSGSS-GSGEKPFKCKECGKAFRQNIHLASHLRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCS-CCCCCSEECSSSCCEESSHHHHHHHHHHHCC-CCSSCSSCC
T ss_pred             CCCCC-CCCCCCEECCcCCchhCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            35666 6777777777777777777777777777777 677776643

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=9.7e-13  Score=69.88  Aligned_cols=44  Identities=18%  Similarity=0.288  Sum_probs=41.0

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      |+++|++ +++|.|.+|++.|...+.|..|+++|+++++ |.|++|
T Consensus         3 h~~~h~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2em8_A            3 SGSSGSG-EKPYKCVECGKGYKRRLDLDFHQRVHTGEKL-SGPSSG   46 (46)
T ss_dssp             CCCCCCS-CCSEECSSSCCEESSHHHHHHHHHHHHCCCC-CCSCCC
T ss_pred             CCCCCCC-CCCeECcccCchhCCHHHHHHHHHHHcCCCC-CCCCCC
Confidence            4567888 9999999999999999999999999999998 999987

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1e-12  Score=69.77  Aligned_cols=44  Identities=20%  Similarity=0.283  Sum_probs=41.0

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      |+++|++ +++|.|..|++.|...+.|..|+++|+++++ |.|++|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~~   46 (46)
T 2ep3_A            3 SGSSGTG-EKPYRCAECGKAFTDRSNLFTHQKIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCSSSSC-CCSEECSSSCCEESSHHHHHHHHTTTTTSCC-CCTTCC
T ss_pred             CCCCCCC-CCCeECCCCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            5678899 9999999999999999999999999999998 999875

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=5.3e-13  Score=70.92  Aligned_cols=44  Identities=20%  Similarity=0.347  Sum_probs=41.4

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      |+++|++ +++|.|.+|++.|...+.|..|+++|+++++ |.|++|
T Consensus         3 H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTG-EKPFKCGECGKSYNQRVHLTQHQRVHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCCSS-CCSEECTTTCCEESSSHHHHTTGGGGSSCCS-SCSCCC
T ss_pred             CCCCCCC-CCCeECCCCCcccCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            5677899 9999999999999999999999999999998 999987

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=6.6e-13  Score=70.53  Aligned_cols=44  Identities=18%  Similarity=0.292  Sum_probs=41.2

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      |+++|++ +++|.|.+|++.|...+.|..|+++|+++++ |.|++|
T Consensus         3 H~~~h~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTG-EKPYKCEKCGKGYNSKFNLDMHQKVHTGERP-SGPSSG   46 (46)
T ss_dssp             CCCCCSS-CCSEEETTTTEEESCHHHHHHHHTTSCSCCS-SCCSCC
T ss_pred             CCcCCCC-CCCeECCCCCCccCCHHHHHHHHHhhCCCCC-CCCCCC
Confidence            5677889 9999999999999999999999999999998 999987

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=4.9e-12  Score=67.06  Aligned_cols=43  Identities=21%  Similarity=0.288  Sum_probs=31.8

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecC
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   53 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~   53 (161)
                      .|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|+
T Consensus         2 ~H~~~-H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~-~~~~~C~   44 (46)
T 2em3_A            2 SSGSS-GTGEKPYECKVCSKAFTQKAHLAQHQKTHTG-EKPSGPS   44 (46)
T ss_dssp             CCCCC-CSSCCSEECSSSCCEESSHHHHHHHHHHHCC-CCCCCSC
T ss_pred             CCCCC-CCCCcCeECCCCCcccCCHHHHHHHHHHhCC-CCCCCCC
Confidence            46666 7777777777777777777777777777777 7777765

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.4e-12  Score=69.44  Aligned_cols=44  Identities=16%  Similarity=0.167  Sum_probs=41.1

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHH-hhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVA-IKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r-~h~~~~~~~~C~~C   84 (161)
                      |+++|++ ++||.|..|++.|...+.|..|++ +|+++++ |.|+.|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~-~~C~~C   47 (47)
T 2epx_A            3 SGSSGTG-KKPYECIECGKAFIQNTSLIRHWRYYHTGEKP-SGPSSG   47 (47)
T ss_dssp             CCCCCCC-CCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCS-SSCCCC
T ss_pred             cccccCC-CCCEECCccCchhCChHHHHHHhHhhcCCCCC-CCCCCC
Confidence            5677899 999999999999999999999999 9999998 999987

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.26  E-value=4.8e-12  Score=67.13  Aligned_cols=43  Identities=19%  Similarity=0.342  Sum_probs=31.2

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecC
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   53 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~   53 (161)
                      .|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|+
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2emj_A            2 SSGSS-GTGEKPFECAECGKSFSISSQLATHQRIHTG-EKPSGPS   44 (46)
T ss_dssp             CCCCC-CCCCCSEECSSSSCEESSHHHHHHHHHHHTT-SCSSSSC
T ss_pred             CCCCC-CCCCCCEECCCCCcccCCHHHHHHHHHHhCC-CCCCCCC
Confidence            46666 7777777777777777777777777777777 7777765

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=2e-12  Score=68.62  Aligned_cols=44  Identities=20%  Similarity=0.384  Sum_probs=40.7

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      |+++|++ +++|.|..|++.|...+.|..|+++|+++++ |.|+.|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~~   46 (46)
T 2em2_A            3 SGSSGSG-EKPFKCKECGKAFRQNIHLASHLRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCSCCC-CCSEECSSSCCEESSHHHHHHHHHHHCCCCS-SCSSCC
T ss_pred             CCCCCCC-CCCEECCcCCchhCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            5667889 9999999999999999999999999999998 999875

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.26  E-value=1.8e-12  Score=75.60  Aligned_cols=50  Identities=18%  Similarity=0.272  Sum_probs=45.8

Q ss_pred             HhcCCCCCeecC--CcCCccCchHHHHHHHHhhCCCCCccccCCCCCccccccc
Q psy7450          42 LECGKEPRYQCP--HCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKH   93 (161)
Q Consensus        42 ~h~~~~k~~~C~--~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~~~~   93 (161)
                      .+.+ +++|.|+  .|++.|.....|..|+++|+++++ |.|+.||+.|.+.+.
T Consensus        13 ~~~~-~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~   64 (73)
T 1f2i_G           13 VVPK-MRPYACPVESCDRRFSRSDELTRHIRIHTGQKP-FQCRICMRNFSRSDH   64 (73)
T ss_dssp             CCCC-CCCEECSSTTBCCEESSHHHHHHHHHHHHCCCC-EECTTTCCEESCHHH
T ss_pred             cCCC-CCccCCcCCCCCCccCCHHHHHHHHHhhCCCCC-eECCCCCchhCCHHH
Confidence            4667 8999997  599999999999999999999998 999999999997766

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.26  E-value=2.8e-13  Score=76.85  Aligned_cols=52  Identities=8%  Similarity=0.070  Sum_probs=46.1

Q ss_pred             HHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCccccccc
Q psy7450          37 YRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKH   93 (161)
Q Consensus        37 ~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~~~~   93 (161)
                      ..|+++|++ ++||.|+.|++.|...+.|.   ++|+++++ |.|+.||+.|....+
T Consensus         3 ~~h~~~H~~-~k~~~C~~C~k~F~~~~~l~---~~H~~~k~-~~C~~C~k~f~~~~~   54 (62)
T 1vd4_A            3 ETDERDSTN-RASFKCPVCSSTFTDLEANQ---LFDPMTGT-FRCTFCHTEVEEDES   54 (62)
T ss_dssp             CCCSSSCCS-SSEEECSSSCCEEEHHHHHH---HEETTTTE-EBCSSSCCBCEECTT
T ss_pred             hhHHHHcCC-CCCccCCCCCchhccHHHhH---hhcCCCCC-EECCCCCCccccCcc
Confidence            356778999 99999999999999998886   78999888 999999999987665

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=5.8e-12  Score=66.72  Aligned_cols=43  Identities=23%  Similarity=0.324  Sum_probs=32.4

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecC
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   53 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~   53 (161)
                      .|+++ |+++++|.|+.|++.|.....|..|+++|++ ++||.|+
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2ep1_A            2 SSGSS-GTGEKPYECSDCGKSFIKKSQLHVHQRIHTG-ENPSGPS   44 (46)
T ss_dssp             CCCCC-CSSCCSSCCSSSCCCCSSHHHHHHHHGGGSS-SCCCSSS
T ss_pred             ccccC-CCCCCCcCCCCCCchhCCHHHHHHHHHHhCC-CCCCCCC
Confidence            46677 7777777777777777777777777777777 7777775

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=5.9e-12  Score=66.77  Aligned_cols=43  Identities=33%  Similarity=0.367  Sum_probs=31.9

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecC
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   53 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~   53 (161)
                      .|+++ |++++||.|..|++.|.....|..|+++|++ ++||.|+
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2em4_A            2 SSGSS-GTGQRPYECIECGKAFKTKSSLICHRRSHTG-EKPSGPS   44 (46)
T ss_dssp             CSCCC-CCCSSSEECSSSCCEESSHHHHHHHHHHHSS-SSCCCCC
T ss_pred             CCccc-cCCCcCcCCCCCCCccCCHHHHHHHHHhcCC-CCCCCCC
Confidence            46667 7777777777777777777777777777777 7777775

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=5.1e-12  Score=66.98  Aligned_cols=44  Identities=27%  Similarity=0.438  Sum_probs=33.0

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCC
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPH   54 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~   54 (161)
                      .|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|++
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2enf_A            2 SSGSS-GTGEKPYKCNECGKVFTQNSHLVRHRGIHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCCC-CCCCCSCBCSSSCCBCSSHHHHHHHHTTTTT-SSCCCCSC
T ss_pred             CCCcC-CCCCcCeECCCCCcccCCHHHHHHHHHhhCC-CCCCCCCC
Confidence            46667 7777777777777777777777777777777 77777753

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=5.8e-12  Score=66.74  Aligned_cols=43  Identities=23%  Similarity=0.379  Sum_probs=31.3

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecC
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   53 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~   53 (161)
                      .|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|+
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2eow_A            2 SSGSS-GTGEKPYKCNECGKAFRARSSLAIHQATHSG-EKPSGPS   44 (46)
T ss_dssp             CCCCC-SCCCCCEECTTSCCEESSHHHHHHHHHHHCC-CSCSCTT
T ss_pred             CccCC-CCCCCCeeccccCChhcCHHHHHHHHHHcCC-CCCCCCC
Confidence            46666 7777777777777777777777777777777 7777765

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=7.7e-12  Score=66.32  Aligned_cols=44  Identities=18%  Similarity=0.262  Sum_probs=33.3

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCC
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPH   54 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~   54 (161)
                      .|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|++
T Consensus         2 ~h~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2en9_A            2 SSGSS-GAGKKLFKCNECKKTFTQSSSLTVHQRIHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCSS-CCSSCCCBCTTTCCBCSSHHHHHHHHHHHTS-SCCCSCCC
T ss_pred             CCCCC-CCCCCCEECCccCcccCCHHHHHHHHHHcCC-CCCCCCCC
Confidence            46667 7777778888888888877777778777777 77777753

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=5.4e-12  Score=66.90  Aligned_cols=43  Identities=23%  Similarity=0.366  Sum_probs=32.6

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecC
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   53 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~   53 (161)
                      .|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|+
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2eq2_A            2 SSGSS-GTGGKPYQCNECGKAFSQTSKLARHQRVHTG-EKPSGPS   44 (46)
T ss_dssp             CCCCS-SSSSCSSSCCSSCCCCSSHHHHHHHGGGGCC-CCCCCCC
T ss_pred             Ccccc-cCCCCCeECCCCCcccCCHHHHHHHHHHcCC-CCCCCCC
Confidence            46667 7777777777777777777777777777777 7777775

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.25  E-value=4.8e-12  Score=66.79  Aligned_cols=41  Identities=22%  Similarity=0.305  Sum_probs=22.5

Q ss_pred             CCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCcC
Q psy7450          15 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCP   56 (161)
Q Consensus        15 h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~   56 (161)
                      |++++||.|+.|++.|.....|..|+++|++ +++|.|+.||
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~-~~~~~C~~cg   45 (45)
T 2epq_A            5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG-SVGKSGPSSG   45 (45)
T ss_dssp             CSSCCSSEETTTTEECSCHHHHHHHHHHHSC-CCCCCCCCCC
T ss_pred             cCCCCCCcCCCCCcccCCHHHHHHHHHHccC-CCCCCCcCCC
Confidence            5555555555555555555555555555555 5555555553

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=5.6e-12  Score=66.82  Aligned_cols=43  Identities=28%  Similarity=0.441  Sum_probs=32.4

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecC
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   53 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~   53 (161)
                      .|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|+
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2yti_A            2 SSGSS-GTGEKPYKCNECGKVFTQNSHLARHRGIHTG-EKPSGPS   44 (46)
T ss_dssp             CCCCC-CSCCCTTCCSSSCCCCSSHHHHHHHHTTTSC-SCCSSTT
T ss_pred             CCCcC-CCCCcCeECCCCCcccCChhHHHHHhHhcCC-CCCCCCC
Confidence            46667 7777777777777777777777777777777 7777775

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=6.9e-12  Score=66.49  Aligned_cols=43  Identities=19%  Similarity=0.312  Sum_probs=32.6

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecC
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   53 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~   53 (161)
                      .|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|+
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2yth_A            2 SSGSS-GSGEKPFQCEECGKRFTQNSHLHSHQRVHTG-EKPSGPS   44 (46)
T ss_dssp             CCCSC-CCCSSSBCCSSSCCCBSSHHHHHHHGGGGTT-CCCSSCC
T ss_pred             CcccC-CCCCcCCCCCCCCcccCCHHHHHHHHHhcCC-CCCCCCC
Confidence            46677 7777777777777777777777777777777 7777775

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=5.4e-12  Score=66.93  Aligned_cols=43  Identities=23%  Similarity=0.381  Sum_probs=29.9

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecC
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   53 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~   53 (161)
                      .|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|+
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2ytp_A            2 SSGSS-GTGERHYECSECGKAFARKSTLIMHQRIHTG-EKPSGPS   44 (46)
T ss_dssp             CCCCS-SCCCCCEECSSSCCEESSHHHHHHHHTTTSC-CCCCSSC
T ss_pred             CcccC-cCCCCCeECCcCCcccCCHHHHHHHHHHhCC-CCCCCCC
Confidence            46666 6777777777777777777777777777776 6777664

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=6.6e-12  Score=65.82  Aligned_cols=42  Identities=21%  Similarity=0.341  Sum_probs=29.7

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeec
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQC   52 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C   52 (161)
                      .|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C   43 (44)
T 2eof_A            2 SSGSS-GTGEKPYECNECQKAFNTKSNLMVHQRTHTG-ESGPSS   43 (44)
T ss_dssp             CCSSC-CSCCCSEECTTTCCEESCHHHHHHHHHHTTT-SSCSCC
T ss_pred             CCccC-CCCCCCeECCCCCcccCCHhHHHHHHHHhCC-CCCCCC
Confidence            46666 7777777777777777777777777777777 667666

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.24  E-value=7.8e-12  Score=65.98  Aligned_cols=42  Identities=31%  Similarity=0.424  Sum_probs=39.8

Q ss_pred             HhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCC
Q psy7450          42 LECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQG   85 (161)
Q Consensus        42 ~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~   85 (161)
                      +|++ ++||.|.+|++.|...+.|..|+++|+++++ |.|+.||
T Consensus         4 ~h~~-~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~-~~C~~cg   45 (45)
T 2epq_A            4 GSSG-EKPYSCPVCGLRFKRKDRMSYHVRSHDGSVG-KSGPSSG   45 (45)
T ss_dssp             CCSS-CCSSEETTTTEECSCHHHHHHHHHHHSCCCC-CCCCCCC
T ss_pred             CcCC-CCCCcCCCCCcccCCHHHHHHHHHHccCCCC-CCCcCCC
Confidence            5778 9999999999999999999999999999998 9999997

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=6.9e-12  Score=66.51  Aligned_cols=43  Identities=23%  Similarity=0.367  Sum_probs=32.5

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecC
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   53 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~   53 (161)
                      .|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|+
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2em6_A            2 SSGSS-GMGEKCYKCDVCGKEFSQSSHLQTHQRVHTG-EKPSGPS   44 (46)
T ss_dssp             CCCSC-CCCCCCCBCSSSCCBCSSHHHHHHHHTTTSS-SCCCCTT
T ss_pred             CCccc-cCCCCCeECCCCCcccCCHHHHHHHHHHcCC-CCCCCCC
Confidence            46667 7777777777777777777777777777777 7777775

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=7.3e-12  Score=66.37  Aligned_cols=43  Identities=23%  Similarity=0.367  Sum_probs=32.2

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecC
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   53 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~   53 (161)
                      .|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|+
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~   44 (46)
T 2emg_A            2 SSGSS-GTGENPFICSECGKVFTHKTNLIIHQKIHTG-ERPSGPS   44 (46)
T ss_dssp             CCCCC-CCSCCSCBCTTTCCBCSSHHHHHHHHTTTSC-CCCSCSC
T ss_pred             CCCCC-CCCCCCEECCccCcccCCHHHHHHHHHHhCC-CCCCCCC
Confidence            46667 7777777777777777777777777777777 7777775

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.24  E-value=6.8e-12  Score=65.13  Aligned_cols=41  Identities=24%  Similarity=0.402  Sum_probs=23.2

Q ss_pred             ccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeec
Q psy7450          10 HTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQC   52 (161)
Q Consensus        10 H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C   52 (161)
                      |+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|
T Consensus         1 H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C   41 (42)
T 2el5_A            1 GSSG-SSGENPYECSECGKAFNRKDQLISHQRTHAG-ESGPSS   41 (42)
T ss_dssp             CCSS-SSSCCSEECSSSCCEESSHHHHHHHHGGGCC-CCSCCC
T ss_pred             CCCC-CCCCCCccCCCcChhhCCHHHHHHHHHhcCC-CCCCCC
Confidence            3444 5555555555555555555555555555555 555554

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=7e-12  Score=66.48  Aligned_cols=43  Identities=21%  Similarity=0.302  Sum_probs=32.5

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecC
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   53 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~   53 (161)
                      +|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|+
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~   44 (46)
T 2eoz_A            2 SSGSS-GTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQ-ETLSGPS   44 (46)
T ss_dssp             CSCCC-CSSCCSEEETTTTEEESSHHHHHHHHHHHSS-CCSSSCC
T ss_pred             Ccccc-CCCCCCeECcccChhhCCHHHHHHHHHHhCC-CCCCCCC
Confidence            46677 7777777777777777777777777777777 7777775

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=7e-12  Score=66.44  Aligned_cols=43  Identities=21%  Similarity=0.394  Sum_probs=32.6

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecC
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   53 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~   53 (161)
                      .|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|+
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2eq1_A            2 SSGSS-GTGEKPYKCNECGKAFRAHSNLTTHQVIHTG-EKPSGPS   44 (46)
T ss_dssp             CCCCC-CCCSCCCCCTTTTCCCSSHHHHHHHHTTTCC-SCCSSCC
T ss_pred             Ccccc-cCCCCCeECCcCChhhCCHHHHHHHHHHhCC-CCCCCCC
Confidence            46677 7777777777777777777777777777777 7777775

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=7.1e-12  Score=66.38  Aligned_cols=43  Identities=21%  Similarity=0.357  Sum_probs=31.0

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecC
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   53 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~   53 (161)
                      .|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|+
T Consensus         2 ~H~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~kp~~C~   44 (46)
T 2eor_A            2 SSGSS-GTGEKPYNCEECGKAFIHDSQLQEHQRIHTG-EKPSGPS   44 (46)
T ss_dssp             CSSSS-SSCCCSEECTTTCCEESSHHHHHHHHHHHHS-CCCSSST
T ss_pred             CCCcC-cCCCcCccCCCCCCCcCCHHHHHHHHHhcCC-CCCCCCC
Confidence            46666 7777777777777777777777777777777 7777765

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.23  E-value=5.4e-12  Score=67.62  Aligned_cols=39  Identities=15%  Similarity=0.149  Sum_probs=22.7

Q ss_pred             CCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCC
Q psy7450          47 EPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGP   86 (161)
Q Consensus        47 ~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k   86 (161)
                      +++|.|.+|++.|.....|..|+++|+++++ |.|++|++
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C~k   48 (48)
T 2epr_A           10 RKQVACEICGKIFRDVYHLNRHKLSHSGEKP-YSSGPSSG   48 (48)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGGGSCSCCC-CCSCCCCC
T ss_pred             CcCeeCCCCCcccCCHHHHHHHHHhcCCCCC-ccCCCCCC
Confidence            5555555555555555555556555555555 66665553

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=9.5e-12  Score=64.52  Aligned_cols=41  Identities=12%  Similarity=0.228  Sum_probs=24.6

Q ss_pred             ccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeec
Q psy7450          10 HTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQC   52 (161)
Q Consensus        10 H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C   52 (161)
                      |+++ |++++||.|+.|++.|...+.|..|+++|++ ++||.|
T Consensus         1 H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C   41 (42)
T 2yte_A            1 GSSG-SSGEKPYSCAECKETFSDNNRLVQHQKMHTV-KSGPSS   41 (42)
T ss_dssp             CCSS-SCSCCSCBCTTTCCBCSSHHHHHHHHHHTSC-CSSCCC
T ss_pred             CCcC-cCCCCCeECCCCCCccCCHHHHHHHHHHhCC-CCCCCC
Confidence            3445 5666666666666666666666666666666 556554

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=6.2e-12  Score=66.63  Aligned_cols=43  Identities=28%  Similarity=0.417  Sum_probs=30.2

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecC
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   53 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~   53 (161)
                      .|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|+
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~p~~C~   44 (46)
T 2yts_A            2 SSGSS-GTGEKPYICNECGKSFIQKSHLNRHRRIHTG-EKPSGPS   44 (46)
T ss_dssp             CCSCC-CCSCCSEECSSSCCEESSHHHHHHHGGGTSS-CCSSCCC
T ss_pred             CCCCC-CCCCcCEECCCCChhhCChHHHHHHHHhcCC-CCCcCCC
Confidence            46666 7777777777777777777777777777777 6777665

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=6.5e-12  Score=66.54  Aligned_cols=43  Identities=19%  Similarity=0.267  Sum_probs=29.0

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecC
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   53 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~   53 (161)
                      .|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|+
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2ytf_A            2 SSGSS-GTGEKPFECSECQKAFNTKSNLIVHQRTHTG-EKPSGPS   44 (46)
T ss_dssp             CCCCS-SCCCCSEECSSSCCEESSHHHHHHHHHTSCS-SSSSCCC
T ss_pred             CCCCC-CCCCCCcCCCCCCcccCCHHHHHHHHHHhCC-CCCCCCC
Confidence            45666 6666677777777777777777777666666 6666664

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=8.9e-12  Score=66.03  Aligned_cols=43  Identities=23%  Similarity=0.350  Sum_probs=30.5

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecC
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   53 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~   53 (161)
                      .|+++ |+++++|.|+.|++.|.....|..|+++|++ ++||.|+
T Consensus         2 ~H~~~-H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2emi_A            2 SSGSS-GTGERHYECSECGKAFIQKSTLSMHQRIHRG-EKPSGPS   44 (46)
T ss_dssp             CCCCS-CSSCCCEECSSSCCEESSHHHHHHHHGGGCS-CCCCSCC
T ss_pred             CCCcc-cCCCCCCCCCCCCcccCCHHHHHHHHhHhCC-CCCCCCC
Confidence            46666 7777777777777777777777777777777 6777664

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=7.5e-12  Score=66.29  Aligned_cols=43  Identities=23%  Similarity=0.377  Sum_probs=30.6

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecC
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   53 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~   53 (161)
                      .|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|+
T Consensus         2 ~H~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2yrj_A            2 SSGSS-GTGEKPYRCGECGKAFAQKANLTQHQRIHTG-EKPSGPS   44 (46)
T ss_dssp             CCCCC-CCCCCCEECSSSCCEESSHHHHHHHHTTTSS-CCSSCSC
T ss_pred             CCccC-CCCCCCeECCCCCCccCCHHHHHHHHHHcCC-CCCCCCC
Confidence            46666 7777777777777777777777777777777 7777665

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=8.7e-12  Score=66.11  Aligned_cols=43  Identities=23%  Similarity=0.324  Sum_probs=31.3

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecC
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   53 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~   53 (161)
                      +|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|+
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2yto_A            2 SSGSS-GTGEKPYKCSDCGKAFTRKSGLHIHQQSHTG-ERHSGPS   44 (46)
T ss_dssp             CCCCC-CCSCCCEECSSSCCEESSHHHHHHHHHHHTC-CCBTTTB
T ss_pred             Ccccc-cCCCCCEECcccCCccCCHhHHHHHHHHcCC-CCCCCCC
Confidence            46666 7777777777777777777777777777777 7777664

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=8.4e-12  Score=65.42  Aligned_cols=43  Identities=23%  Similarity=0.326  Sum_probs=30.9

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecC
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   53 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~   53 (161)
                      .|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|+
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~   44 (44)
T 2en7_A            2 SSGSS-GTGMKPYVCNECGKAFRSKSYLIIHTRTHTG-ESGPSSG   44 (44)
T ss_dssp             CSCCC-SSSSSSSCCTTTCCCCSSHHHHHHHHTTTCC-SSSSCCC
T ss_pred             CCCcC-CCCCcCeECCCCCCccCCHHHHHHHhhhcCC-CCCCCCC
Confidence            46666 7777777777777777777777777777777 7777663

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.22  E-value=2.4e-12  Score=70.81  Aligned_cols=49  Identities=22%  Similarity=0.295  Sum_probs=30.7

Q ss_pred             ccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCC
Q psy7450          28 KVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPE   77 (161)
Q Consensus        28 ~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~   77 (161)
                      +.|.....|..|+++|++ +++|.|.+|++.|...+.|..|+++|+++++
T Consensus         4 k~~~~~~~l~~h~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp   52 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQS-EQPATCPICYAVIRQSRNLRRHLELRHFAKP   52 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTS-SCCEECTTTCCEESSHHHHHHHHHHHTTTSC
T ss_pred             cccCCCcchhhHHHhcCC-CCCccCCCCCcccCCHHHHHHHHHHhccCCC
Confidence            345555555666666666 6666666666666666666666666666655

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.22  E-value=4e-12  Score=66.02  Aligned_cols=42  Identities=21%  Similarity=0.271  Sum_probs=38.5

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVK   82 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~   82 (161)
                      |+++|++ +++|.|.+|++.|...+.|..|+++|+++++ |.|+
T Consensus         1 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   42 (42)
T 2el5_A            1 GSSGSSG-ENPYECSECGKAFNRKDQLISHQRTHAGESG-PSSG   42 (42)
T ss_dssp             CCSSSSS-CCSEECSSSCCEESSHHHHHHHHGGGCCCCS-CCCC
T ss_pred             CCCCCCC-CCCccCCCcChhhCCHHHHHHHHHhcCCCCC-CCCC
Confidence            4567889 9999999999999999999999999999988 9985

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=7.6e-12  Score=65.65  Aligned_cols=42  Identities=17%  Similarity=0.379  Sum_probs=30.6

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeec
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQC   52 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C   52 (161)
                      .|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C   43 (44)
T 2emb_A            2 SSGSS-GHTRKRYECSKCQATFNLRKHLIQHQKTHAA-KSGPSS   43 (44)
T ss_dssp             CCCSC-CCCCSSEECTTTCCEESCHHHHHHHGGGGCC-CCCTTC
T ss_pred             Ccccc-cCCCCCeECCCCCCccCCHHHHHHHHHHcCC-CCCcCC
Confidence            46666 7777777777777777777777777777777 777766

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.2e-11  Score=65.61  Aligned_cols=43  Identities=19%  Similarity=0.257  Sum_probs=30.8

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecC
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   53 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~   53 (161)
                      .|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|+
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2eoh_A            2 SSGSS-GSGKKPYECKECRKTFIQIGHLNQHKRVHTG-ERSSGPS   44 (46)
T ss_dssp             CCCCS-CCCSCSCCCSSSCCCCSSHHHHHHHHHHCSS-CCSCSTT
T ss_pred             CCCCC-cCCCCCcCCCCcCchhCCHHHHHHHHHHhCC-CCCCCCC
Confidence            35666 7777777777777777777777777777777 7777664

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=8.5e-12  Score=66.11  Aligned_cols=40  Identities=25%  Similarity=0.379  Sum_probs=20.5

Q ss_pred             CCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450          15 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus        15 h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      |+++++|.|+.|++.|.....|..|+++|++ ++||.|.+|
T Consensus         7 h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2ep0_A            7 GTGEKPYKCDVCHKSFRYGSSLTVHQRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             STTCCSEECSSSCCEESSHHHHHHHHTTTSS-SCCCSCCCC
T ss_pred             CCCCCCeeCcccCcccCChHHHHHHHHHhCC-CCCCCCCCC
Confidence            4555555555555555555555555555555 455555443

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.22  E-value=4.6e-12  Score=67.22  Aligned_cols=43  Identities=19%  Similarity=0.260  Sum_probs=39.9

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   83 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~   83 (161)
                      |+++|++ ++||.|..|++.|...+.|..|+++|+++++ |.|++
T Consensus         3 H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2emj_A            3 SGSSGTG-EKPFECAECGKSFSISSQLATHQRIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCCCCCC-CCSEECSSSSCEESSHHHHHHHHHHHTTSCS-SSSCC
T ss_pred             CCCCCCC-CCCEECCCCCcccCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            5678899 9999999999999999999999999999998 99974

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.9e-12  Score=65.65  Aligned_cols=42  Identities=19%  Similarity=0.253  Sum_probs=38.4

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVK   82 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~   82 (161)
                      |+++|++ ++||.|.+|++.|...+.|..|+++|+++++ |.|+
T Consensus         1 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   42 (42)
T 2yte_A            1 GSSGSSG-EKPYSCAECKETFSDNNRLVQHQKMHTVKSG-PSSG   42 (42)
T ss_dssp             CCSSSCS-CCSCBCTTTCCBCSSHHHHHHHHHHTSCCSS-CCCC
T ss_pred             CCcCcCC-CCCeECCCCCCccCCHHHHHHHHHHhCCCCC-CCCC
Confidence            3567888 9999999999999999999999999999988 9885

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=7.4e-12  Score=66.38  Aligned_cols=40  Identities=20%  Similarity=0.228  Sum_probs=25.5

Q ss_pred             CCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450          15 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus        15 h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      |+++++|.|++|++.|.....|..|+++|++ ++||.|.+|
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2ytt_A            7 GEGEKPYQCSECGKSFSGSYRLTQHWITHTR-EKPSGPSSG   46 (46)
T ss_dssp             CSCCCTTCCSSSCCCCSSHHHHHHHHTHHHH-CCCCSCCCC
T ss_pred             CCCCCCeeCCCCCcccCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            6666666666666666666666666666666 666666554

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=4.6e-12  Score=67.21  Aligned_cols=43  Identities=19%  Similarity=0.205  Sum_probs=39.9

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   83 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~   83 (161)
                      |+++|++ ++||.|..|++.|...+.|..|+++|+++++ |.|++
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2em4_A            3 SGSSGTG-QRPYECIECGKAFKTKSSLICHRRSHTGEKP-SGPSS   45 (46)
T ss_dssp             SCCCCCC-SSSEECSSSCCEESSHHHHHHHHHHHSSSSC-CCCCC
T ss_pred             CccccCC-CcCcCCCCCCCccCCHHHHHHHHHhcCCCCC-CCCCC
Confidence            5678899 9999999999999999999999999999998 99974

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=8.1e-12  Score=65.52  Aligned_cols=43  Identities=23%  Similarity=0.346  Sum_probs=31.3

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecC
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   53 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~   53 (161)
                      .|+++ |++++||.|+.|++.|.....|..|+++|++ +++|.|+
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~   44 (44)
T 2eoj_A            2 SSGSS-GTGENPYECCECGKVFSRKDQLVSHQKTHSG-QSGPSSG   44 (44)
T ss_dssp             CSCCS-SSSCCSCEETTTTEECSSHHHHHHHHTTSSS-SCSCCCC
T ss_pred             CCccc-cCCCcCeeCCCCCCccCCHHHHHHHHHHcCC-CCCCCCC
Confidence            46666 7777777777777777777777777777777 7777663

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=9.5e-12  Score=65.27  Aligned_cols=42  Identities=12%  Similarity=0.251  Sum_probs=26.3

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeec
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQC   52 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C   52 (161)
                      +|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C   43 (44)
T 2yu5_A            2 SSGSS-GAGENPFKCSKCDRVFTQRNYLVQHERTHAR-KSGPSS   43 (44)
T ss_dssp             CCSCC-CSCCCSEECSSSSCEESSSHHHHHHHHHCCC-CCSSCC
T ss_pred             CCccc-cCCCCCeECCCCCchhCCHHHHHHHhHhcCC-CCCCCC
Confidence            35555 6666666666666666666666666666666 666655

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=9.8e-12  Score=65.89  Aligned_cols=43  Identities=19%  Similarity=0.234  Sum_probs=33.1

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecC
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   53 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~   53 (161)
                      .|+++ |++++||.|+.|++.|.....|..|+++|++ +++|.|+
T Consensus         2 ~h~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2emz_A            2 SSGSS-GSGERPFKCNECGKGFGRRSHLAGHLRLHSR-EKSSGPS   44 (46)
T ss_dssp             CCCSC-SSCCCSCCCSSSCCCCSSHHHHHHHHHHHHH-TTCCCSC
T ss_pred             CCCcC-CCCCCCeECCCCCcccCCHHHHHHHHHHhCC-CCCCCCC
Confidence            46677 7777788888888888887778778777777 7777775

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=5.6e-12  Score=66.82  Aligned_cols=43  Identities=23%  Similarity=0.319  Sum_probs=39.9

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   83 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~   83 (161)
                      |+++|++ +++|.|.+|++.|...+.|..|+++|+++++ |.|++
T Consensus         3 H~~~H~~-~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~C~~   45 (46)
T 2em3_A            3 SGSSGTG-EKPYECKVCSKAFTQKAHLAQHQKTHTGEKP-SGPSS   45 (46)
T ss_dssp             CCCCCSS-CCSEECSSSCCEESSHHHHHHHHHHHCCCCC-CCSCC
T ss_pred             CCCCCCC-CcCeECCCCCcccCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            5678899 9999999999999999999999999999998 99974

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=6.7e-12  Score=73.86  Aligned_cols=69  Identities=19%  Similarity=0.173  Sum_probs=62.0

Q ss_pred             CCCCCCccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCC
Q psy7450           4 EFNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPE   77 (161)
Q Consensus         4 ~~~l~~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~   77 (161)
                      +..|..|+.+ +.+++|+.|..|++.|. ...|..|+ .+.+ ++|+.|..|++.|. ...|..|++++.+++.
T Consensus         2 ~~~L~~H~~~-~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~-~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~~   70 (75)
T 2d9k_A            2 SSGSSGHEET-ECPLRLAVCQHCDLELS-ILKLKEHE-DYCG-ARTELCGNCGRNVL-VKDLKTHPEVCGREGS   70 (75)
T ss_dssp             CCCCSCCCCC-CCCCCCEECSSSCCEEC-HHHHHHHH-HHHH-HCEEECSSSCCEEE-TTGGGTHHHHBTTBSS
T ss_pred             chHHHhhCcc-cCCCcccCCcccChHhh-HHHHHHHH-hHcC-CCceEcccCCCcCc-HHHHHHHHHHccCCcC
Confidence            4679999999 99999999999999995 88999999 8999 99999999999887 5899999999887643

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=5.5e-12  Score=66.83  Aligned_cols=43  Identities=19%  Similarity=0.274  Sum_probs=39.9

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   83 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~   83 (161)
                      |+++|++ +++|.|..|++.|...+.|..|+++|+++++ |.|++
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2eow_A            3 SGSSGTG-EKPYKCNECGKAFRARSSLAIHQATHSGEKP-SGPSS   45 (46)
T ss_dssp             CCCCSCC-CCCEECTTSCCEESSHHHHHHHHHHHCCCSC-SCTTC
T ss_pred             ccCCCCC-CCCeeccccCChhcCHHHHHHHHHHcCCCCC-CCCCC
Confidence            5678899 9999999999999999999999999999998 99974

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.8e-12  Score=67.14  Aligned_cols=43  Identities=21%  Similarity=0.285  Sum_probs=39.8

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   83 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~   83 (161)
                      |+++|++ +++|.|..|++.|...+.|..|+++|+++++ |.|+.
T Consensus         3 H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2ytp_A            3 SGSSGTG-ERHYECSECGKAFARKSTLIMHQRIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCCSSCC-CCCEECSSSCCEESSHHHHHHHHTTTSCCCC-CSSCC
T ss_pred             cccCcCC-CCCeECCcCCcccCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            5678899 9999999999999999999999999999998 99974

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.1e-11  Score=65.57  Aligned_cols=43  Identities=21%  Similarity=0.408  Sum_probs=33.1

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecC
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   53 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~   53 (161)
                      .|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|+
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2eq3_A            2 SSGSS-GTGEKPYECNQCGKAFSVRSSLTTHQAIHTG-KKPSGPS   44 (46)
T ss_dssp             CCCCS-SCCCCSSEETTTTEECSSHHHHHHHHTTSCC-CCCCCSC
T ss_pred             CcccC-CCCCCCeECCCCChhhCCHHHHHHHHHHhCC-CCCCCCC
Confidence            46777 7777788888888888888888888777777 7777775

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=6.8e-12  Score=66.50  Aligned_cols=43  Identities=19%  Similarity=0.237  Sum_probs=39.9

Q ss_pred             HHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          40 RTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        40 ~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      +++|++ +++|.|.+|++.|...+.|..|+++|+++++ |.|++|
T Consensus         4 ~~~h~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ep0_A            4 GSSGTG-EKPYKCDVCHKSFRYGSSLTVHQRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCSSTT-CCSEECSSSCCEESSHHHHHHHHTTTSSSCC-CSCCCC
T ss_pred             CCCCCC-CCCeeCcccCcccCChHHHHHHHHHhCCCCC-CCCCCC
Confidence            356888 9999999999999999999999999999998 999987

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.1e-11  Score=65.80  Aligned_cols=42  Identities=21%  Similarity=0.411  Sum_probs=28.7

Q ss_pred             ccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecC
Q psy7450          10 HTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   53 (161)
Q Consensus        10 H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~   53 (161)
                      |+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|+
T Consensus         3 h~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2eon_A            3 SGSS-GTGEKPYKCQVCGKAFRVSSHLVQHHSVHSG-ERPSGPS   44 (46)
T ss_dssp             CSSS-CSSCCSCBCSSSCCBCSSHHHHHHHTTTTTS-CCSCTTS
T ss_pred             CCCC-CCCCcccCCCCCCcccCcHHHHHHHHHhcCC-CCCCCCC
Confidence            5556 6666777777777777777777777666666 6666664

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=7.2e-12  Score=65.01  Aligned_cols=41  Identities=27%  Similarity=0.356  Sum_probs=28.9

Q ss_pred             ccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeec
Q psy7450          10 HTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQC   52 (161)
Q Consensus        10 H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C   52 (161)
                      |+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|
T Consensus         2 H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C   42 (42)
T 2ytb_A            2 SSGS-SGGEKPYRCDQCGKAFSQKGSLIVHIRVHTG-SGPSSG   42 (42)
T ss_dssp             CCCC-CCSCCSBCCTTTTCCBSSHHHHHTTGGGTSC-CSCCCC
T ss_pred             Cccc-cCCCCCeeCCCccchhCCHHHHHHHHHHhCC-CCCCCC
Confidence            5666 7777777777777777777777777777777 666665

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=4.3e-12  Score=67.31  Aligned_cols=43  Identities=19%  Similarity=0.223  Sum_probs=39.9

Q ss_pred             HHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          40 RTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        40 ~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      +++|++ +++|.|.+|++.|...+.|..|+++|+++++ |.|++|
T Consensus         4 ~~~h~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ytt_A            4 GSSGEG-EKPYQCSECGKSFSGSYRLTQHWITHTREKP-SGPSSG   46 (46)
T ss_dssp             SSSCSC-CCTTCCSSSCCCCSSHHHHHHHHTHHHHCCC-CSCCCC
T ss_pred             CCCCCC-CCCeeCCCCCcccCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            356888 9999999999999999999999999999998 999987

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=9.8e-12  Score=64.51  Aligned_cols=41  Identities=17%  Similarity=0.241  Sum_probs=29.5

Q ss_pred             ccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeec
Q psy7450          10 HTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQC   52 (161)
Q Consensus        10 H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C   52 (161)
                      |+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|
T Consensus         2 H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C   42 (42)
T 2en2_A            2 SSGS-SGGEKPYKCETCGARFVQVAHLRAHVLIHTG-SGPSSG   42 (42)
T ss_dssp             CCCC-CCSSCSEECTTTCCEESSHHHHHHHTHHHHS-CCSSCC
T ss_pred             CCcc-cCCCCCEeCCCcChhhCCHHHHHHHHHHcCC-CCCCCC
Confidence            5566 7777777777777777777777777777777 777665

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.19  E-value=1.5e-11  Score=63.77  Aligned_cols=41  Identities=20%  Similarity=0.209  Sum_probs=26.6

Q ss_pred             ccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeec
Q psy7450          10 HTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQC   52 (161)
Q Consensus        10 H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C   52 (161)
                      |+++ |++++||.|+.|++.|...+.|..|+++|++ ++||.|
T Consensus         2 H~~~-H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~-~k~~~C   42 (42)
T 2epc_A            2 SSGS-SGGETPYLCGQCGKSFTQRGSLAVHQRSCSQ-SGPSSG   42 (42)
T ss_dssp             CCSC-CCSSCCEECSSSCCEESSHHHHHHHHHHTTC-CCCCCC
T ss_pred             CCcc-CCCCCCeECCCCCcccCCHHHHHHHhhhcCC-CCCCCC
Confidence            4555 6666666666666666666666666666666 666655

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=6.4e-12  Score=66.60  Aligned_cols=43  Identities=23%  Similarity=0.305  Sum_probs=39.8

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   83 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~   83 (161)
                      |+++|++ +++|.|..|++.|...+.|..|+++|+++++ |.|+.
T Consensus         3 H~~~H~~-~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2emi_A            3 SGSSGTG-ERHYECSECGKAFIQKSTLSMHQRIHRGEKP-SGPSS   45 (46)
T ss_dssp             CCCSCSS-CCCEECSSSCCEESSHHHHHHHHGGGCSCCC-CSCCC
T ss_pred             CCcccCC-CCCCCCCCCCcccCCHHHHHHHHhHhCCCCC-CCCCC
Confidence            5678899 9999999999999999999999999999998 99974

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=5.2e-12  Score=66.96  Aligned_cols=43  Identities=23%  Similarity=0.308  Sum_probs=39.8

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   83 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~   83 (161)
                      |+++|++ +++|.|..|++.|...+.|..|+++|+++++ |.|++
T Consensus         3 H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2enf_A            3 SGSSGTG-EKPYKCNECGKVFTQNSHLVRHRGIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCCCCCC-CCSCBCSSSCCBCSSHHHHHHHHTTTTTSSC-CCCSC
T ss_pred             CCcCCCC-CcCeECCCCCcccCCHHHHHHHHHhhCCCCC-CCCCC
Confidence            5678899 9999999999999999999999999999988 99974

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.19  E-value=1.2e-11  Score=67.98  Aligned_cols=49  Identities=18%  Similarity=0.038  Sum_probs=45.4

Q ss_pred             CCCCCCCCCccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCee
Q psy7450           1 MFSEFNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQ   51 (161)
Q Consensus         1 f~~~~~l~~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~   51 (161)
                      |.....|..|+.+ |++++||.|..|++.|...+.|..|+++|++ ++||.
T Consensus         6 ~~~~~~l~~h~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~kp~~   54 (54)
T 1yui_A            6 AKHPPGTEKPRSR-SQSEQPATCPICYAVIRQSRNLRRHLELRHF-AKPGV   54 (54)
T ss_dssp             CSCSSCCCCCHHH-HTSSCCEECTTTCCEESSHHHHHHHHHHHTT-TSCCC
T ss_pred             cCCCcchhhHHHh-cCCCCCccCCCCCcccCCHHHHHHHHHHhcc-CCCCC
Confidence            5677889999999 9999999999999999999999999999999 88873

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=6.3e-12  Score=66.59  Aligned_cols=43  Identities=21%  Similarity=0.301  Sum_probs=39.9

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   83 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~   83 (161)
                      |+++|++ +++|.|..|++.|...+.|..|+++|+++++ |.|++
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2ep1_A            3 SGSSGTG-EKPYECSDCGKSFIKKSQLHVHQRIHTGENP-SGPSS   45 (46)
T ss_dssp             CCCCCSS-CCSSCCSSSCCCCSSHHHHHHHHGGGSSSCC-CSSSC
T ss_pred             cccCCCC-CCCcCCCCCCchhCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            5678899 9999999999999999999999999999998 99974

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=6.1e-12  Score=66.65  Aligned_cols=43  Identities=16%  Similarity=0.244  Sum_probs=39.8

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   83 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~   83 (161)
                      |+++|++ +++|.|..|++.|...+.|..|+++|+++++ |.|++
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2ytf_A            3 SGSSGTG-EKPFECSECQKAFNTKSNLIVHQRTHTGEKP-SGPSS   45 (46)
T ss_dssp             CCCSSCC-CCSEECSSSCCEESSHHHHHHHHHTSCSSSS-SCCCC
T ss_pred             CCCCCCC-CCCcCCCCCCcccCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            5677889 9999999999999999999999999999998 99974

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=8.8e-12  Score=66.05  Aligned_cols=43  Identities=14%  Similarity=0.182  Sum_probs=30.6

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecC
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   53 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~   53 (161)
                      .|+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|+
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~~~~~C~   44 (46)
T 2en3_A            2 SSGSS-GTGEKPFQCKECGMNFSWSCSLFKHLRSHER-TDPSGPS   44 (46)
T ss_dssp             CCCCC-SCCCCSEECSSSCCEESSSHHHHHHHHHHHH-SCCSSCS
T ss_pred             ccccc-cCCCCCeeCcccChhhCCHHHHHHHHHHhCC-CCCCCCC
Confidence            46666 7777777777777777777777777777777 6777664

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.19  E-value=1.1e-11  Score=66.36  Aligned_cols=42  Identities=24%  Similarity=0.435  Sum_probs=40.2

Q ss_pred             CCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCcCC
Q psy7450          15 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPY   57 (161)
Q Consensus        15 h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~   57 (161)
                      |.++++|.|++|++.|.....|..|+++|++ ++||.|.+|++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSG-EKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCS-CCCCCSCCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCC-CCCccCCCCCC
Confidence            7888999999999999999999999999999 99999999985

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=7.4e-12  Score=71.65  Aligned_cols=46  Identities=11%  Similarity=0.135  Sum_probs=42.1

Q ss_pred             cCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccC-CCCCccccccc
Q psy7450          44 CGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVK-HQGPEMLSIKH   93 (161)
Q Consensus        44 ~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~-~C~k~f~~~~~   93 (161)
                      .+ ++||.|..|++.|. .+.|..|+++ +++++ |.|+ .||++|...+.
T Consensus         6 C~-~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p-~~C~~~C~k~f~~~~~   52 (66)
T 2eod_A            6 SG-KRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLP-VACPNQCGVGTVARED   52 (66)
T ss_dssp             CC-CCEEECSSSCCEEE-HHHHHHHHHH-CSSSE-EECTTCCSCCEEETTT
T ss_pred             CC-CCCeeccccCCccC-HHHHHHHHHH-cCCcC-ccCCcccCcccccHHH
Confidence            45 78999999999999 9999999999 88887 9999 99999997766

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=6.2e-12  Score=66.60  Aligned_cols=43  Identities=19%  Similarity=0.268  Sum_probs=39.9

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   83 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~   83 (161)
                      |+++|++ +++|.|..|++.|...+.|..|+++|+++++ |.|++
T Consensus         3 H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp-~~C~~   45 (46)
T 2eor_A            3 SGSSGTG-EKPYNCEECGKAFIHDSQLQEHQRIHTGEKP-SGPSS   45 (46)
T ss_dssp             SSSSSSC-CCSEECTTTCCEESSHHHHHHHHHHHHSCCC-SSSTT
T ss_pred             CCcCcCC-CcCccCCCCCCCcCCHHHHHHHHHhcCCCCC-CCCCC
Confidence            5678899 9999999999999999999999999999998 99974

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=7.4e-12  Score=66.38  Aligned_cols=43  Identities=19%  Similarity=0.271  Sum_probs=39.5

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   83 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~   83 (161)
                      |+++|++ ++||.|.+|++.|...+.|..|+++|+++++ |.|+.
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2eoh_A            3 SGSSGSG-KKPYECKECRKTFIQIGHLNQHKRVHTGERS-SGPSS   45 (46)
T ss_dssp             CCCSCCC-SCSCCCSSSCCCCSSHHHHHHHHHHCSSCCS-CSTTC
T ss_pred             CCCCcCC-CCCcCCCCcCchhCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            5667889 9999999999999999999999999999998 99963

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=6.3e-12  Score=66.63  Aligned_cols=43  Identities=19%  Similarity=0.234  Sum_probs=39.7

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   83 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~   83 (161)
                      |+++|++ +++|.|..|++.|...+.|..|+++|+++++ |.|+.
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~   45 (46)
T 2emg_A            3 SGSSGTG-ENPFICSECGKVFTHKTNLIIHQKIHTGERP-SGPSS   45 (46)
T ss_dssp             CCCCCCS-CCSCBCTTTCCBCSSHHHHHHHHTTTSCCCC-SCSCC
T ss_pred             CCCCCCC-CCCEECCccCcccCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            5677889 9999999999999999999999999999998 99974

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=5.9e-12  Score=66.73  Aligned_cols=43  Identities=19%  Similarity=0.245  Sum_probs=39.8

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   83 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~   83 (161)
                      |+++|++ +++|.|..|++.|...+.|..|+++|+++++ |.|+.
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2eq2_A            3 SGSSGTG-GKPYQCNECGKAFSQTSKLARHQRVHTGEKP-SGPSS   45 (46)
T ss_dssp             CCCSSSS-SCSSSCCSSCCCCSSHHHHHHHGGGGCCCCC-CCCCC
T ss_pred             cccccCC-CCCeECCCCCcccCCHHHHHHHHHHcCCCCC-CCCCC
Confidence            5678899 9999999999999999999999999999998 99974

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=5.9e-12  Score=66.74  Aligned_cols=43  Identities=23%  Similarity=0.318  Sum_probs=39.7

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   83 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~   83 (161)
                      |+++|++ +++|.|..|++.|...+.|..|+++|+++++ |.|++
T Consensus         3 H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2yti_A            3 SGSSGTG-EKPYKCNECGKVFTQNSHLARHRGIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCCCCSC-CCTTCCSSSCCCCSSHHHHHHHHTTTSCSCC-SSTTC
T ss_pred             CCcCCCC-CcCeECCCCCcccCChhHHHHHhHhcCCCCC-CCCCC
Confidence            5677889 9999999999999999999999999999998 99974

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=6.3e-12  Score=66.58  Aligned_cols=43  Identities=26%  Similarity=0.308  Sum_probs=39.8

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   83 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~   83 (161)
                      |+++|++ +++|.|..|++.|...+.|..|+++|++++| |.|++
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p-~~C~~   45 (46)
T 2yts_A            3 SGSSGTG-EKPYICNECGKSFIQKSHLNRHRRIHTGEKP-SGPSS   45 (46)
T ss_dssp             CSCCCCS-CCSEECSSSCCEESSHHHHHHHGGGTSSCCS-SCCCC
T ss_pred             CCCCCCC-CcCEECCCCChhhCChHHHHHHHHhcCCCCC-cCCCC
Confidence            5678899 9999999999999999999999999999998 99974

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=6.6e-12  Score=66.57  Aligned_cols=43  Identities=23%  Similarity=0.375  Sum_probs=39.8

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   83 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~   83 (161)
                      |+++|++ ++||.|..|++.|...+.|..|+++|+++++ |.|+.
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2yth_A            3 SGSSGSG-EKPFQCEECGKRFTQNSHLHSHQRVHTGEKP-SGPSS   45 (46)
T ss_dssp             CCSCCCC-SSSBCCSSSCCCBSSHHHHHHHGGGGTTCCC-SSCCC
T ss_pred             cccCCCC-CcCCCCCCCCcccCCHHHHHHHHHhcCCCCC-CCCCC
Confidence            5678889 9999999999999999999999999999998 99974

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.18  E-value=5e-12  Score=77.32  Aligned_cols=65  Identities=18%  Similarity=0.169  Sum_probs=55.0

Q ss_pred             CCCeecCCcCCccCchHHHHHHHHh-hCCCCCc-------cccCCCCCccccccccCCCccchhhhhhhhhhcccCCCCC
Q psy7450          47 EPRYQCPHCPYRGKQKVHLKTHVAI-KHQGPEM-------LSVKHQGPEMLSIKHQGPETLSIKHQVSEMLSIKHQGPET  118 (161)
Q Consensus        47 ~k~~~C~~C~~~f~~~~~l~~H~r~-h~~~~~~-------~~C~~C~k~f~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  118 (161)
                      ...+.|..|++.|.....|..|+++ |.++++.       |.|+.|++.|.....               | ..|+++|+
T Consensus        23 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~---------------L-~~H~~~H~   86 (95)
T 2ej4_A           23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYK---------------L-VNHIRVHT   86 (95)
T ss_dssp             CSSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHH---------------H-HHHHHHHH
T ss_pred             cCCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHH---------------H-HHHHHhcC
Confidence            3457899999999999999999998 6665431       899999999998777               6 67888999


Q ss_pred             cCcccCCCc
Q psy7450         119 LSIKHQGPE  127 (161)
Q Consensus       119 ~~~~~~c~~  127 (161)
                      ++++|.|+.
T Consensus        87 ~~k~~~C~~   95 (95)
T 2ej4_A           87 GEKSGPSSG   95 (95)
T ss_dssp             TCCCCSSCC
T ss_pred             CCCCCCCCC
Confidence            999999964

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=8.4e-12  Score=66.16  Aligned_cols=43  Identities=16%  Similarity=0.245  Sum_probs=39.7

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   83 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~   83 (161)
                      |+++|++ +++|.|..|++.|...+.|..|+++|+++++ |.|+.
T Consensus         3 h~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2en9_A            3 SGSSGAG-KKLFKCNECKKTFTQSSSLTVHQRIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCSSCCS-SCCCBCTTTCCBCSSHHHHHHHHHHHTSSCC-CSCCC
T ss_pred             CCCCCCC-CCCEECCccCcccCCHHHHHHHHHHcCCCCC-CCCCC
Confidence            5667889 9999999999999999999999999999998 99974

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=7.1e-12  Score=66.46  Aligned_cols=43  Identities=23%  Similarity=0.325  Sum_probs=39.8

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   83 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~   83 (161)
                      |+++|++ +++|.|..|++.|...+.|..|+++|+++++ |.|+.
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2em6_A            3 SGSSGMG-EKCYKCDVCGKEFSQSSHLQTHQRVHTGEKP-SGPSS   45 (46)
T ss_dssp             CCSCCCC-CCCCBCSSSCCBCSSHHHHHHHHTTTSSSCC-CCTTC
T ss_pred             CccccCC-CCCeECCCCCcccCCHHHHHHHHHHcCCCCC-CCCCC
Confidence            5677899 9999999999999999999999999999998 99974

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=8.3e-12  Score=65.43  Aligned_cols=42  Identities=21%  Similarity=0.283  Sum_probs=39.1

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVK   82 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~   82 (161)
                      |+++|++ +++|.|..|++.|...+.|..|+++|+++++ |.|+
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (44)
T 2eof_A            3 SGSSGTG-EKPYECNECQKAFNTKSNLMVHQRTHTGESG-PSSG   44 (44)
T ss_dssp             CSSCCSC-CCSEECTTTCCEESCHHHHHHHHHHTTTSSC-SCCC
T ss_pred             CccCCCC-CCCeECCCCCcccCCHhHHHHHHHHhCCCCC-CCCC
Confidence            5678899 9999999999999999999999999999988 9985

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=7.5e-12  Score=66.29  Aligned_cols=43  Identities=23%  Similarity=0.310  Sum_probs=39.8

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   83 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~   83 (161)
                      |+++|++ +++|.|..|++.|...+.|..|+++|+++++ |.|+.
T Consensus         3 H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2yrj_A            3 SGSSGTG-EKPYRCGECGKAFAQKANLTQHQRIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCCCCCC-CCCEECSSSCCEESSHHHHHHHHTTTSSCCS-SCSCC
T ss_pred             CccCCCC-CCCeECCCCCCccCCHHHHHHHHHHcCCCCC-CCCCC
Confidence            5678899 9999999999999999999999999999998 99974

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=2.6e-11  Score=63.57  Aligned_cols=41  Identities=22%  Similarity=0.417  Sum_probs=28.7

Q ss_pred             ccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeec
Q psy7450          10 HTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQC   52 (161)
Q Consensus        10 H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C   52 (161)
                      |+.+ |+++++|.|+.|++.|.....|..|+++|++ ++||.|
T Consensus         3 h~~~-h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C   43 (44)
T 2eou_A            3 SGSS-GAAKTTSECQECGKIFRHSSLLIEHQALHAG-ESGPSS   43 (44)
T ss_dssp             CSCS-CSSSCCCCCTTTCCCCSSHHHHHHHHHHHTT-SCCCCC
T ss_pred             CCCC-CCCCcCeECCCCCcccCCHHHHHHHHHHHCC-CCCCCC
Confidence            5556 6677777777777777777777777777777 667666

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=9.4e-12  Score=65.30  Aligned_cols=42  Identities=19%  Similarity=0.249  Sum_probs=39.0

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVK   82 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~   82 (161)
                      |+++|++ ++||.|..|++.|...+.|..|+++|+++++ |.|+
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (44)
T 2yu5_A            3 SGSSGAG-ENPFKCSKCDRVFTQRNYLVQHERTHARKSG-PSSG   44 (44)
T ss_dssp             CSCCCSC-CCSEECSSSSCEESSSHHHHHHHHHCCCCCS-SCCC
T ss_pred             CccccCC-CCCeECCCCCchhCCHHHHHHHhHhcCCCCC-CCCC
Confidence            5678899 9999999999999999999999999999988 9985

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=1.2e-11  Score=64.16  Aligned_cols=41  Identities=17%  Similarity=0.287  Sum_probs=26.7

Q ss_pred             ccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeec
Q psy7450          10 HTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQC   52 (161)
Q Consensus        10 H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C   52 (161)
                      |+++ |++++||.|+.|++.|...+.|..|+++|++ ++||.|
T Consensus         2 H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C   42 (42)
T 2eos_A            2 SSGS-SGGEKPYPCEICGTRFRHLQTLKSHLRIHTG-SGPSSG   42 (42)
T ss_dssp             CCSC-CSSSCCBCCSSSCCCBSSHHHHHHHTTTTSC-CSSTTC
T ss_pred             CCcc-cCCCCCEECCCCCCccCCHHHHHHHHHhcCC-CCCCCC
Confidence            4555 6666666666666666666666666666666 666654

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=7.5e-12  Score=66.36  Aligned_cols=43  Identities=21%  Similarity=0.297  Sum_probs=39.9

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   83 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~   83 (161)
                      |+++|++ ++||.|.+|++.|...+.|..|+++|+++++ |.|+.
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~   45 (46)
T 2eoz_A            3 SGSSGTG-EKPYSCNVCGKAFVLSAHLNQHLRVHTQETL-SGPSS   45 (46)
T ss_dssp             SCCCCSS-CCSEEETTTTEEESSHHHHHHHHHHHSSCCS-SSCCC
T ss_pred             ccccCCC-CCCeECcccChhhCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            6678899 9999999999999999999999999999998 99973

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=7.2e-12  Score=66.40  Aligned_cols=43  Identities=21%  Similarity=0.313  Sum_probs=39.8

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   83 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~   83 (161)
                      |+++|++ +++|.|..|++.|...+.|..|+++|+++++ |.|+.
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2eq1_A            3 SGSSGTG-EKPYKCNECGKAFRAHSNLTTHQVIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCCCCCC-SCCCCCTTTTCCCSSHHHHHHHHTTTCCSCC-SSCCC
T ss_pred             cccccCC-CCCeECCcCChhhCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            5678889 9999999999999999999999999999998 99974

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.8e-11  Score=64.82  Aligned_cols=42  Identities=24%  Similarity=0.339  Sum_probs=28.3

Q ss_pred             ccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecC
Q psy7450          10 HTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   53 (161)
Q Consensus        10 H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~   53 (161)
                      |+++ |++++||.|+.|++.|.....|..|+++|++ ++||.|+
T Consensus         3 h~~~-h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2enh_A            3 SGSS-GTGEKPYECDVCRKAFSHHASLTQHQRVHSG-EKPSGPS   44 (46)
T ss_dssp             CCCC-CCCSSSCBCTTTCCBCSSSHHHHHHGGGSCC-SCCCCCC
T ss_pred             CCCC-cCCCCCcCCCCcCchhCCHHHHHHHHHHhCC-CCCCCCC
Confidence            4556 6666777777777777776777777666666 6666664

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=6.7e-12  Score=66.58  Aligned_cols=43  Identities=19%  Similarity=0.285  Sum_probs=39.5

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   83 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~   83 (161)
                      |+++|++ ++||.|.+|++.|...+.|..|+++|+++++ |.|+.
T Consensus         3 h~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2eon_A            3 SGSSGTG-EKPYKCQVCGKAFRVSSHLVQHHSVHSGERP-SGPSS   45 (46)
T ss_dssp             CSSSCSS-CCSCBCSSSCCBCSSHHHHHHHTTTTTSCCS-CTTSC
T ss_pred             CCCCCCC-CcccCCCCCCcccCcHHHHHHHHHhcCCCCC-CCCCC
Confidence            4567889 9999999999999999999999999999998 99974

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=7.3e-12  Score=65.66  Aligned_cols=42  Identities=19%  Similarity=0.194  Sum_probs=39.0

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVK   82 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~   82 (161)
                      |+++|++ +++|.|.+|++.|...+.|..|+++|+++++ |.|+
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (44)
T 2en7_A            3 SGSSGTG-MKPYVCNECGKAFRSKSYLIIHTRTHTGESG-PSSG   44 (44)
T ss_dssp             SCCCSSS-SSSSCCTTTCCCCSSHHHHHHHHTTTCCSSS-SCCC
T ss_pred             CCcCCCC-CcCeECCCCCCccCCHHHHHHHhhhcCCCCC-CCCC
Confidence            5678899 9999999999999999999999999999998 9985

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=8.9e-12  Score=66.06  Aligned_cols=42  Identities=19%  Similarity=0.261  Sum_probs=39.3

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVK   82 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~   82 (161)
                      |+++|++ ++||.|..|++.|...+.|..|+++|+++++ |.|+
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2yto_A            3 SGSSGTG-EKPYKCSDCGKAFTRKSGLHIHQQSHTGERH-SGPS   44 (46)
T ss_dssp             CCCCCCS-CCCEECSSSCCEESSHHHHHHHHHHHTCCCB-TTTB
T ss_pred             cccccCC-CCCEECcccCCccCCHhHHHHHHHHcCCCCC-CCCC
Confidence            5678889 9999999999999999999999999999998 9996

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.2e-11  Score=64.82  Aligned_cols=42  Identities=19%  Similarity=0.311  Sum_probs=31.0

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeec
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQC   52 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C   52 (161)
                      .|+++ |++++||.|++|++.|.....|..|+++|++ ++||.|
T Consensus         2 ~H~~~-H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~-~~~~~C   43 (44)
T 2eox_A            2 SSGSS-GTDSKSYNCNECGKAFTRIFHLTRHQKIHTR-KSGPSS   43 (44)
T ss_dssp             CCCCC-CCCCCCEEETTTTEEESSSHHHHTTHHHHCC-CCCCSC
T ss_pred             CCCcC-CCCCCCeECcccCcccCCHHHHHHHHHHhCC-CCCCCC
Confidence            46666 7777777777777777777777777777777 777765

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=8.3e-12  Score=66.18  Aligned_cols=42  Identities=14%  Similarity=0.119  Sum_probs=29.2

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCC-CCCccccC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQ-GPEMLSVK   82 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~-~~~~~~C~   82 (161)
                      |+++|++ ++||.|..|++.|...+.|..|+++|++ +++ |.|+
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-~~C~   45 (46)
T 2eoy_A            3 SGSSGQK-EKCFKCNKCEKTFSCSKYLTQHERIHTRGVKS-GPSS   45 (46)
T ss_dssp             CCCCCCC-SCCEECSSSCCEESSSHHHHHHHTTCCSCCTT-SSSC
T ss_pred             CccccCC-CCCEECcCCCCcCCCHHHHHHHHHHcCCCCCC-CCCC
Confidence            3455666 6777777777777777777777777776 666 7765

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=6.5e-12  Score=65.89  Aligned_cols=42  Identities=21%  Similarity=0.243  Sum_probs=39.0

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVK   82 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~   82 (161)
                      |+++|++ ++||.|.+|++.|...+.|..|+++|+++++ |.|+
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (44)
T 2eoj_A            3 SGSSGTG-ENPYECCECGKVFSRKDQLVSHQKTHSGQSG-PSSG   44 (44)
T ss_dssp             SCCSSSS-CCSCEETTTTEECSSHHHHHHHHTTSSSSCS-CCCC
T ss_pred             CccccCC-CcCeeCCCCCCccCCHHHHHHHHHHcCCCCC-CCCC
Confidence            5678899 9999999999999999999999999999988 9985

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.15  E-value=1.3e-11  Score=64.07  Aligned_cols=41  Identities=24%  Similarity=0.215  Sum_probs=37.8

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCcccc
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSV   81 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C   81 (161)
                      |+++|++ ++||.|..|++.|...+.|..|+++|+++++ |.|
T Consensus         2 H~~~H~~-~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~-~~C   42 (42)
T 2epc_A            2 SSGSSGG-ETPYLCGQCGKSFTQRGSLAVHQRSCSQSGP-SSG   42 (42)
T ss_dssp             CCSCCCS-SCCEECSSSCCEESSHHHHHHHHHHTTCCCC-CCC
T ss_pred             CCccCCC-CCCeECCCCCcccCCHHHHHHHhhhcCCCCC-CCC
Confidence            4567888 9999999999999999999999999999998 987

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=1.2e-11  Score=64.90  Aligned_cols=42  Identities=19%  Similarity=0.261  Sum_probs=39.0

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVK   82 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~   82 (161)
                      |+++|++ +++|.|..|++.|...+.|..|+++|+++++ |.|+
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (44)
T 2emb_A            3 SGSSGHT-RKRYECSKCQATFNLRKHLIQHQKTHAAKSG-PSSG   44 (44)
T ss_dssp             CCSCCCC-CSSEECTTTCCEESCHHHHHHHGGGGCCCCC-TTCC
T ss_pred             cccccCC-CCCeECCCCCCccCCHHHHHHHHHHcCCCCC-cCCC
Confidence            5678899 9999999999999999999999999999998 9985

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=4e-11  Score=62.87  Aligned_cols=42  Identities=21%  Similarity=0.305  Sum_probs=28.1

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeec
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQC   52 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C   52 (161)
                      .|+++ |++++||.|++|++.|...+.|..|+++|++ ++||.|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~~   43 (44)
T 2epv_A            2 SSGSS-GSGEKPYECNECGKAFIWKSLLIVHERTHAG-VSGPSS   43 (44)
T ss_dssp             CCCCC-CCCCCSEECSSSCCEESSHHHHHHHHGGGSS-CSCCCC
T ss_pred             CCCcc-cCCCcCeECCCCCcccCchHHHHHHHhHhcC-CCCCCC
Confidence            35666 6666677777777777776777777666666 666654

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1e-11  Score=65.82  Aligned_cols=43  Identities=16%  Similarity=0.333  Sum_probs=39.7

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   83 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~   83 (161)
                      |+++|++ +++|.|.+|++.|...+.|..|+++|+++++ |.|+.
T Consensus         3 h~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2emz_A            3 SGSSGSG-ERPFKCNECGKGFGRRSHLAGHLRLHSREKS-SGPSS   45 (46)
T ss_dssp             CCSCSSC-CCSCCCSSSCCCCSSHHHHHHHHHHHHHTTC-CCSCC
T ss_pred             CCcCCCC-CCCeECCCCCcccCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            5677899 9999999999999999999999999999998 99973

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.2e-11  Score=65.48  Aligned_cols=43  Identities=16%  Similarity=0.261  Sum_probs=39.1

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   83 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~   83 (161)
                      |+++|++ +++|.|.+|++.|...+.|..|+++|+++++ |.|+.
T Consensus         3 h~~~h~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2enh_A            3 SGSSGTG-EKPYECDVCRKAFSHHASLTQHQRVHSGEKP-SGPSS   45 (46)
T ss_dssp             CCCCCCC-SSSCBCTTTCCBCSSSHHHHHHGGGSCCSCC-CCCCC
T ss_pred             CCCCcCC-CCCcCCCCcCchhCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            4567888 9999999999999999999999999999998 99963

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=8.7e-12  Score=64.72  Aligned_cols=41  Identities=32%  Similarity=0.406  Sum_probs=37.9

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCcccc
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSV   81 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C   81 (161)
                      |+++|++ ++||.|..|++.|...+.|..|+++|+++++ |.|
T Consensus         2 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C   42 (42)
T 2en2_A            2 SSGSSGG-EKPYKCETCGARFVQVAHLRAHVLIHTGSGP-SSG   42 (42)
T ss_dssp             CCCCCCS-SCSEECTTTCCEESSHHHHHHHTHHHHSCCS-SCC
T ss_pred             CCcccCC-CCCEeCCCcChhhCCHHHHHHHHHHcCCCCC-CCC
Confidence            4567889 9999999999999999999999999999998 987

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=6.1e-11  Score=62.78  Aligned_cols=41  Identities=20%  Similarity=0.293  Sum_probs=25.4

Q ss_pred             cccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecC
Q psy7450          11 TLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   53 (161)
Q Consensus        11 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~   53 (161)
                      +.+ |+++++|.|+.|++.|.....|..|+++|++ ++||.|.
T Consensus         4 ~~~-h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2eom_A            4 GSS-GHGERGHRCSDCGKFFLQASNFIQHRRIHTG-EKPSGPS   44 (46)
T ss_dssp             CCC-CCCCSSCCCSSSCCCCSSHHHHHHHHHHHSS-CCCSSCC
T ss_pred             CCC-CCCCCCcCCCCCCCeeCChHHHHHHHHHhCC-CCCCCCC
Confidence            344 5666666666666666666666666666666 6666654

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=1.8e-11  Score=64.20  Aligned_cols=42  Identities=14%  Similarity=0.154  Sum_probs=38.5

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVK   82 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~   82 (161)
                      |+++|++ +++|.|.+|++.|...+.|..|+++|+++++ |.|+
T Consensus         3 h~~~h~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (44)
T 2eou_A            3 SGSSGAA-KTTSECQECGKIFRHSSLLIEHQALHAGESG-PSSG   44 (44)
T ss_dssp             CSCSCSS-SCCCCCTTTCCCCSSHHHHHHHHHHHTTSCC-CCCC
T ss_pred             CCCCCCC-CcCeECCCCCcccCCHHHHHHHHHHHCCCCC-CCCC
Confidence            4567888 9999999999999999999999999999998 9985

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=1.1e-11  Score=64.44  Aligned_cols=41  Identities=27%  Similarity=0.339  Sum_probs=37.7

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCcccc
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSV   81 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C   81 (161)
                      |+++|++ ++||.|.+|++.|...+.|..|+++|+++++ |.|
T Consensus         2 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C   42 (42)
T 2eos_A            2 SSGSSGG-EKPYPCEICGTRFRHLQTLKSHLRIHTGSGP-SSG   42 (42)
T ss_dssp             CCSCCSS-SCCBCCSSSCCCBSSHHHHHHHTTTTSCCSS-TTC
T ss_pred             CCcccCC-CCCEECCCCCCccCCHHHHHHHHHhcCCCCC-CCC
Confidence            4567888 9999999999999999999999999999988 987

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=7.2e-12  Score=65.00  Aligned_cols=41  Identities=24%  Similarity=0.302  Sum_probs=38.2

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCcccc
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSV   81 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C   81 (161)
                      |+++|++ ++||.|..|++.|...+.|..|+++|+++++ |.|
T Consensus         2 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C   42 (42)
T 2ytb_A            2 SSGSSGG-EKPYRCDQCGKAFSQKGSLIVHIRVHTGSGP-SSG   42 (42)
T ss_dssp             CCCCCCS-CCSBCCTTTTCCBSSHHHHHTTGGGTSCCSC-CCC
T ss_pred             CccccCC-CCCeeCCCccchhCCHHHHHHHHHHhCCCCC-CCC
Confidence            5677889 9999999999999999999999999999998 987

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.12  E-value=6.6e-11  Score=61.72  Aligned_cols=38  Identities=16%  Similarity=0.215  Sum_probs=20.8

Q ss_pred             CCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecC
Q psy7450          15 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   53 (161)
Q Consensus        15 h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~   53 (161)
                      |++++||.|+.|++.|.....|..|+++|++ ++||.|+
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   42 (43)
T 2yrm_A            5 SSGNGAFFCNECDCRFSEEASLKRHTLQTHS-DKSGPSS   42 (43)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHHHHHTC-TTCSSSC
T ss_pred             cCCCCCEECCCCCCeeCChHHHHHHHHhhCC-CCCccCC
Confidence            4555555555555555555555555555555 5555553

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.3e-11  Score=65.36  Aligned_cols=43  Identities=23%  Similarity=0.312  Sum_probs=39.7

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   83 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~   83 (161)
                      |+++|++ +++|.|..|++.|...+.|..|+++|+++++ |.|+.
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2eq3_A            3 SGSSGTG-EKPYECNQCGKAFSVRSSLTTHQAIHTGKKP-SGPSS   45 (46)
T ss_dssp             CCCSSCC-CCSSEETTTTEECSSHHHHHHHHTTSCCCCC-CCSCC
T ss_pred             cccCCCC-CCCeECCCCChhhCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            5678899 9999999999999999999999999999998 99973

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.1e-11  Score=65.64  Aligned_cols=42  Identities=17%  Similarity=0.238  Sum_probs=39.3

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVK   82 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~   82 (161)
                      |+++|++ ++||.|.+|++.|...+.|..|+++|+++++ |.|+
T Consensus         3 H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~C~   44 (46)
T 2en3_A            3 SGSSGTG-EKPFQCKECGMNFSWSCSLFKHLRSHERTDP-SGPS   44 (46)
T ss_dssp             CCCCSCC-CCSEECSSSCCEESSSHHHHHHHHHHHHSCC-SSCS
T ss_pred             cccccCC-CCCeeCcccChhhCCHHHHHHHHHHhCCCCC-CCCC
Confidence            5678899 9999999999999999999999999999998 9986

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=4.7e-11  Score=63.68  Aligned_cols=43  Identities=19%  Similarity=0.223  Sum_probs=23.5

Q ss_pred             cccCCCCCcccccc--cccccccCHHHHHHHHHHhcCCCCCeecCCc
Q psy7450          11 TLFNPLLQFRYTCD--SCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   55 (161)
Q Consensus        11 ~~~~h~~~k~~~C~--~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C   55 (161)
                      .++ |++++||.|.  .|++.|.....|..|+++|++ ++||.|..|
T Consensus         4 ~~~-H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   48 (48)
T 2ent_A            4 GSS-GTGEKPFACTWPGCGWRFSRSDELSRHRRSHSG-VKPSGPSSG   48 (48)
T ss_dssp             CCS-SCCCCCEECCSSSCCCEESSHHHHHHHHTTSCC-CCSCSSCCC
T ss_pred             CCC-cCCCCCeECCCCCCCCccCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            344 5555555555  555555555555555555555 555555544

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=4.8e-11  Score=62.83  Aligned_cols=41  Identities=24%  Similarity=0.407  Sum_probs=25.5

Q ss_pred             cccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecC
Q psy7450          11 TLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   53 (161)
Q Consensus        11 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~   53 (161)
                      ..+ |+++++|.|+.|++.|.....|..|+++|++ ++||.|+
T Consensus         4 ~~~-h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~   44 (45)
T 2epu_A            4 GSS-GTGQKPFECTHCGKSFRAKGNLVTHQRIHTG-EKSGPSS   44 (45)
T ss_dssp             CCC-CCSCCSEEETTTTEEESSHHHHHHHHTTTSS-CCCCCSC
T ss_pred             CCC-CCCCcCccCCCCCCccCChHHHHHHHHHhCC-CCCCCCC
Confidence            344 6666666666666666666666666666666 6666654

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.5e-11  Score=63.71  Aligned_cols=42  Identities=21%  Similarity=0.176  Sum_probs=38.5

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVK   82 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~   82 (161)
                      |+++|++ ++||.|.+|++.|...+.|..|+++|+++++ |.|.
T Consensus         3 H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~~g   44 (44)
T 2epv_A            3 SGSSGSG-EKPYECNECGKAFIWKSLLIVHERTHAGVSG-PSSG   44 (44)
T ss_dssp             CCCCCCC-CCSEECSSSCCEESSHHHHHHHHGGGSSCSC-CCCC
T ss_pred             CCcccCC-CcCeECCCCCcccCchHHHHHHHhHhcCCCC-CCCC
Confidence            5678899 9999999999999999999999999999998 8763

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.11  E-value=6e-11  Score=61.91  Aligned_cols=40  Identities=20%  Similarity=0.310  Sum_probs=37.3

Q ss_pred             HhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCC
Q psy7450          42 LECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   83 (161)
Q Consensus        42 ~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~   83 (161)
                      +|++ +++|.|..|++.|...+.|..|+++|+++++ |.|++
T Consensus         4 ~h~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   43 (43)
T 2yrm_A            4 GSSG-NGAFFCNECDCRFSEEASLKRHTLQTHSDKS-GPSSG   43 (43)
T ss_dssp             CCSS-SCCBCCSSSCCCBSSHHHHHHHHHHHTCTTC-SSSCC
T ss_pred             CcCC-CCCEECCCCCCeeCChHHHHHHHHhhCCCCC-ccCCC
Confidence            5788 9999999999999999999999999999998 99974

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.7e-11  Score=64.61  Aligned_cols=43  Identities=16%  Similarity=0.230  Sum_probs=39.6

Q ss_pred             HHHhcCCCCCeecC--CcCCccCchHHHHHHHHhhCCCCCccccCCC
Q psy7450          40 RTLECGKEPRYQCP--HCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   84 (161)
Q Consensus        40 ~~~h~~~~k~~~C~--~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C   84 (161)
                      .++|++ +++|.|.  .|++.|...+.|..|+++|+++++ |.|+.|
T Consensus         4 ~~~H~~-~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   48 (48)
T 2ent_A            4 GSSGTG-EKPFACTWPGCGWRFSRSDELSRHRRSHSGVKP-SGPSSG   48 (48)
T ss_dssp             CCSSCC-CCCEECCSSSCCCEESSHHHHHHHHTTSCCCCS-CSSCCC
T ss_pred             CCCcCC-CCCeECCCCCCCCccCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            356888 9999998  899999999999999999999998 999987

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.3e-11  Score=64.78  Aligned_cols=42  Identities=19%  Similarity=0.268  Sum_probs=38.9

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVK   82 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~   82 (161)
                      |+++|++ ++||.|.+|++.|...+.|..|+++|+++++ |.|.
T Consensus         3 H~~~H~~-~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~C~   44 (44)
T 2eox_A            3 SGSSGTD-SKSYNCNECGKAFTRIFHLTRHQKIHTRKSG-PSSG   44 (44)
T ss_dssp             CCCCCCC-CCCEEETTTTEEESSSHHHHTTHHHHCCCCC-CSCC
T ss_pred             CCcCCCC-CCCeECcccCcccCCHHHHHHHHHHhCCCCC-CCCC
Confidence            5677899 9999999999999999999999999999998 9884

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=4.9e-11  Score=63.13  Aligned_cols=42  Identities=17%  Similarity=0.138  Sum_probs=38.4

Q ss_pred             HHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCC
Q psy7450          40 RTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   83 (161)
Q Consensus        40 ~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~   83 (161)
                      +++|++ +++|.|.+|++.|...+.|..|+++|+++++ |.|++
T Consensus         4 ~~~h~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2eom_A            4 GSSGHG-ERGHRCSDCGKFFLQASNFIQHRRIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCCCCC-CSSCCCSSSCCCCSSHHHHHHHHHHHSSCCC-SSCCC
T ss_pred             CCCCCC-CCCcCCCCCCCeeCChHHHHHHHHHhCCCCC-CCCCC
Confidence            356788 9999999999999999999999999999998 99974

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=2.9e-11  Score=63.72  Aligned_cols=41  Identities=22%  Similarity=0.325  Sum_probs=37.8

Q ss_pred             HHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCC
Q psy7450          41 TLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   83 (161)
Q Consensus        41 ~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~   83 (161)
                      ++|++ +++|.|.+|++.|...+.|..|+++|+++++ |.|+.
T Consensus         5 ~~h~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (45)
T 2epu_A            5 SSGTG-QKPFECTHCGKSFRAKGNLVTHQRIHTGEKS-GPSSG   45 (45)
T ss_dssp             CCCCS-CCSEEETTTTEEESSHHHHHHHHTTTSSCCC-CCSCC
T ss_pred             CCCCC-CcCccCCCCCCccCChHHHHHHHHHhCCCCC-CCCCC
Confidence            46788 9999999999999999999999999999998 99974

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=8.7e-11  Score=62.12  Aligned_cols=45  Identities=11%  Similarity=0.189  Sum_probs=40.0

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCC
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPH   54 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~   54 (161)
                      .|+++ |++++||.|+.|++.|.....|..|+++|++.++||.|++
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            2 SSGSS-GQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCC-CCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CCccc-cCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            58888 9999999999999999999999999999886357898863

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.06  E-value=1.2e-10  Score=67.47  Aligned_cols=48  Identities=17%  Similarity=0.176  Sum_probs=43.4

Q ss_pred             cCCCCCeecCC--cCCccCchHHHHHHHHhhCCCCCccccCC--CCCccccccc
Q psy7450          44 CGKEPRYQCPH--CPYRGKQKVHLKTHVAIKHQGPEMLSVKH--QGPEMLSIKH   93 (161)
Q Consensus        44 ~~~~k~~~C~~--C~~~f~~~~~l~~H~r~h~~~~~~~~C~~--C~k~f~~~~~   93 (161)
                      .. .++|.|..  |++.|.....|..|+++|+++++ |.|++  |++.|.....
T Consensus        13 ~~-~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~~~C~k~f~~~~~   64 (72)
T 2epa_A           13 SR-IRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKP-FSCSWKGCERRFARSDE   64 (72)
T ss_dssp             CC-CCCEECSSTTTCCEESSHHHHHHHHHHHSSSCS-EECCCTTCCCEESSHHH
T ss_pred             cc-cCceeCCCCCCccccCCHHHHHHHHHhcCCCCC-ccCCCCCCCcccCCHHH
Confidence            44 78999998  99999999999999999999998 99965  9999987665

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.05  E-value=1.1e-11  Score=75.20  Aligned_cols=67  Identities=13%  Similarity=0.126  Sum_probs=49.6

Q ss_pred             CCCCCCCcc-----ccCCCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCC
Q psy7450           3 SEFNLPPHT-----LFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQG   75 (161)
Q Consensus         3 ~~~~l~~H~-----~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~   75 (161)
                      ....|.++.     .+ |++++||.|++|++.|.....|..|+++|++ ++||.|..|..    ...|..|+++|.+.
T Consensus         4 ~~~~lkr~~~~~~~~~-H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~-ekp~~C~~~~~----~~~~~~~~~~~~~~   75 (88)
T 1x6f_A            4 GSSGLKRDFIILGNGP-RLQNSTYQCKHCDSKLQSTAELTSHLNIHNE-EFQKRAKRQER----RKQLLSKQKYADGA   75 (88)
T ss_dssp             CCCCCCCCCCCCCCCS-CCCCSCEECSSSCCEESSHHHHHHHHHHHHH-HHHHHCCCCSC----CCCCCCCCCCCCCS
T ss_pred             cchhhccceeeccccc-cCCCCCCcCCCCCCEeCCHHHHHHHHHHhCC-CCCcccchhhh----HHHHHhhhcccccc
Confidence            344555554     44 7888999999999999999999999999998 88999877653    44455566666653

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=9.1e-11  Score=60.45  Aligned_cols=37  Identities=30%  Similarity=0.469  Sum_probs=17.9

Q ss_pred             CCCCcccccccccccccCHHHHHHHHHHhcCCCCCeec
Q psy7450          15 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQC   52 (161)
Q Consensus        15 h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C   52 (161)
                      |++++||.|+.|++.|.....|..|+++|++ ++||.|
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C   41 (41)
T 2ept_A            5 SSGQRVYECQECGKSFRQKGSLTLHERIHTG-SGPSSG   41 (41)
T ss_dssp             CCCCCCEECSSSCCEESSHHHHHHHGGGCCC-CSCSCC
T ss_pred             cCCCCCeECCCCCCCcCCHHHHHHHHHHhCC-CCCcCC
Confidence            4444445555555555444444444444444 444443

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=1.1e-10  Score=60.15  Aligned_cols=38  Identities=26%  Similarity=0.306  Sum_probs=35.8

Q ss_pred             HhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCcccc
Q psy7450          42 LECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSV   81 (161)
Q Consensus        42 ~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C   81 (161)
                      +|++ +++|.|.+|++.|...+.|..|+++|+++++ |.|
T Consensus         4 ~h~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C   41 (41)
T 2ept_A            4 GSSG-QRVYECQECGKSFRQKGSLTLHERIHTGSGP-SSG   41 (41)
T ss_dssp             SCCC-CCCEECSSSCCEESSHHHHHHHGGGCCCCSC-SCC
T ss_pred             ccCC-CCCeECCCCCCCcCCHHHHHHHHHHhCCCCC-cCC
Confidence            5788 9999999999999999999999999999998 987

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.94  E-value=1.5e-10  Score=70.14  Aligned_cols=47  Identities=21%  Similarity=0.371  Sum_probs=41.9

Q ss_pred             HHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCcc
Q psy7450          40 RTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEM   88 (161)
Q Consensus        40 ~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f   88 (161)
                      ..+|++ ++||.|.+|++.|...+.|..|+++|+++++ |.|..|.+..
T Consensus        17 ~~~H~~-~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp-~~C~~~~~~~   63 (88)
T 1x6f_A           17 NGPRLQ-NSTYQCKHCDSKLQSTAELTSHLNIHNEEFQ-KRAKRQERRK   63 (88)
T ss_dssp             CCSCCC-CSCEECSSSCCEESSHHHHHHHHHHHHHHHH-HHCCCCSCCC
T ss_pred             ccccCC-CCCCcCCCCCCEeCCHHHHHHHHHHhCCCCC-cccchhhhHH
Confidence            456888 9999999999999999999999999999988 9998877544

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.92  E-value=1.2e-09  Score=55.48  Aligned_cols=36  Identities=14%  Similarity=0.258  Sum_probs=22.5

Q ss_pred             cCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCcccc
Q psy7450          44 CGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSV   81 (161)
Q Consensus        44 ~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C   81 (161)
                      ++ ++||.|..|++.|...+.|..|+++|+++++ |.+
T Consensus         2 ~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~~   37 (39)
T 1njq_A            2 WP-PRSYTCSFCKREFRSAQALGGHMNVHRRDRA-RLR   37 (39)
T ss_dssp             CC-SSSEECTTTCCEESSHHHHHHHHHTTCCSCT-TTT
T ss_pred             CC-CCceECCCCCcccCCHHHHHHHHHHcCCCcc-cee
Confidence            44 5666666666666666666666666666665 543

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.89  E-value=8.8e-10  Score=56.00  Aligned_cols=37  Identities=16%  Similarity=0.285  Sum_probs=34.0

Q ss_pred             CCCCcccccccccccccCHHHHHHHHHHhcCCCCCeec
Q psy7450          15 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQC   52 (161)
Q Consensus        15 h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C   52 (161)
                      |++++||.|+.|++.|...+.|..|+++|++ ++||.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRR-DRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCC-SCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCC-Ccccee
Confidence            5788999999999999999999999999999 999875

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=1.6e-09  Score=54.23  Aligned_cols=31  Identities=19%  Similarity=0.305  Sum_probs=18.9

Q ss_pred             CCCCcccccccccccccCHHHHHHHHHHhcC
Q psy7450          15 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECG   45 (161)
Q Consensus        15 h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~   45 (161)
                      |++++||.|+.|++.|.....|..|+++|++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~   34 (37)
T 2elo_A            4 GSSGRSYSCPVCEKSFSEDRLIKSHIKTNHP   34 (37)
T ss_dssp             CCCCCCCEETTTTEECSSHHHHHHHHHHHCS
T ss_pred             CCCCCCcCCCCCCCccCCHHHHHHHHHHHcC
Confidence            5555666666666666666666666666655

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.87  E-value=2.3e-09  Score=53.64  Aligned_cols=35  Identities=17%  Similarity=0.184  Sum_probs=24.0

Q ss_pred             ccccCCCCCcccccccccccccCHHHHHHHHHHhcC
Q psy7450          10 HTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECG   45 (161)
Q Consensus        10 H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~   45 (161)
                      |+++ |++++||.|+.|++.|.....|..|+++|++
T Consensus         2 H~~~-h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRG-STGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSST-TCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCc-CCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            5556 6677777777777777777777777666655

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=8.2e-10  Score=55.33  Aligned_cols=36  Identities=19%  Similarity=0.409  Sum_probs=32.9

Q ss_pred             HHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCC
Q psy7450          41 TLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPE   77 (161)
Q Consensus        41 ~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~   77 (161)
                      ++|++ ++||.|..|++.|...+.|..|+++|++++|
T Consensus         2 ~~h~~-~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSS-GRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCC-CCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCC-CCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            45788 9999999999999999999999999998764

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.84  E-value=2.7e-09  Score=52.57  Aligned_cols=30  Identities=20%  Similarity=0.454  Sum_probs=16.7

Q ss_pred             CCCeecCCcCCccCchHHHHHHHHhhCCCC
Q psy7450          47 EPRYQCPHCPYRGKQKVHLKTHVAIKHQGP   76 (161)
Q Consensus        47 ~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~   76 (161)
                      +++|.|..|++.|...+.|..|+++|++++
T Consensus         5 ~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            5 SSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            555555555555555555555555555543

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.83  E-value=1.3e-09  Score=54.52  Aligned_cols=36  Identities=22%  Similarity=0.286  Sum_probs=32.8

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQG   75 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~   75 (161)
                      |+++|++ ++||.|+.|++.|...+.|..|+++|+++
T Consensus         2 H~~~h~~-~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTG-IKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCC-SSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCC-CCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            4567899 99999999999999999999999999874

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.82  E-value=4.4e-09  Score=60.00  Aligned_cols=34  Identities=21%  Similarity=0.240  Sum_probs=17.8

Q ss_pred             CCCeecCC--cCCccCchHHHHHHH-HhhCCCCCcccc
Q psy7450          47 EPRYQCPH--CPYRGKQKVHLKTHV-AIKHQGPEMLSV   81 (161)
Q Consensus        47 ~k~~~C~~--C~~~f~~~~~l~~H~-r~h~~~~~~~~C   81 (161)
                      ++||.|..  |+++|.+.++|..|+ ++|++++| |.|
T Consensus        25 EKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP-~~~   61 (73)
T 1x3c_A           25 YRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLP-AFS   61 (73)
T ss_dssp             SCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCC-CCC
T ss_pred             CCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCC-ccc
Confidence            55555543  555555555555554 34555555 444

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.82  E-value=3.9e-09  Score=60.25  Aligned_cols=39  Identities=13%  Similarity=0.188  Sum_probs=35.6

Q ss_pred             CCCCccccccc--ccccccCHHHHHHHH-HHhcCCCCCeecCC
Q psy7450          15 PLLQFRYTCDS--CGKVYKLKRSLYRHR-TLECGKEPRYQCPH   54 (161)
Q Consensus        15 h~~~k~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~k~~~C~~   54 (161)
                      .++++||.|..  |++.|...++|..|+ ++|++ ++|+.|..
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTg-EKP~~~~~   63 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKS-DLPAFSAE   63 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSS-CCCCCCCS
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCC-CCCccccc
Confidence            68999999975  999999999999997 68999 99999865

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.81  E-value=3.7e-09  Score=52.17  Aligned_cols=29  Identities=14%  Similarity=0.300  Sum_probs=14.6

Q ss_pred             CCCeecCCcCCccCchHHHHHHHHhhCCC
Q psy7450          47 EPRYQCPHCPYRGKQKVHLKTHVAIKHQG   75 (161)
Q Consensus        47 ~k~~~C~~C~~~f~~~~~l~~H~r~h~~~   75 (161)
                      ++||.|..|++.|...+.|..|+++|+++
T Consensus         5 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   33 (35)
T 1srk_A            5 KRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CcCeeCCCCCcccCCHHHHHHHHHHcCCC
Confidence            44555555555555555555555554443

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.79  E-value=4.6e-09  Score=51.71  Aligned_cols=34  Identities=21%  Similarity=0.221  Sum_probs=31.8

Q ss_pred             CCCCcccccccccccccCHHHHHHHHHHhcCCCCC
Q psy7450          15 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPR   49 (161)
Q Consensus        15 h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~   49 (161)
                      |++++||.|..|++.|...+.|..|+++|++ ++|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~-~kp   35 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHG-AAQ   35 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSC-TTC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcC-CCC
Confidence            7899999999999999999999999999998 664

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.79  E-value=6.3e-09  Score=50.80  Aligned_cols=30  Identities=30%  Similarity=0.639  Sum_probs=19.3

Q ss_pred             CCeecCCcCCccCchHHHHHHHHhhCCCCC
Q psy7450          48 PRYQCPHCPYRGKQKVHLKTHVAIKHQGPE   77 (161)
Q Consensus        48 k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~   77 (161)
                      +||.|.+|++.|...+.|..|+++|+++++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~   30 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGE   30 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCC
Confidence            356666666666666666666666666665

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.79  E-value=4.9e-09  Score=51.68  Aligned_cols=34  Identities=15%  Similarity=0.243  Sum_probs=31.8

Q ss_pred             CCCCcccccccccccccCHHHHHHHHHHhcCCCCC
Q psy7450          15 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPR   49 (161)
Q Consensus        15 h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~   49 (161)
                      |++++||.|+.|++.|.....|..|+++|++ ++|
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~-~~~   35 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD-TLS   35 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTS-CCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCC-CCC
Confidence            8899999999999999999999999999998 664

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=7.8e-09  Score=52.38  Aligned_cols=28  Identities=25%  Similarity=0.616  Sum_probs=15.0

Q ss_pred             CCCeecCC--cCCccCchHHHHHHHHhhCC
Q psy7450          47 EPRYQCPH--CPYRGKQKVHLKTHVAIKHQ   74 (161)
Q Consensus        47 ~k~~~C~~--C~~~f~~~~~l~~H~r~h~~   74 (161)
                      ++||.|++  |+++|...+.|..|+++|++
T Consensus         7 ekp~~C~~~~C~k~F~~~~~L~~H~r~Htg   36 (38)
T 2eln_A            7 GILLKCPTDGCDYSTPDKYKLQAHLKVHTA   36 (38)
T ss_dssp             CCCEECSSSSCCCEESCHHHHHHHHHHHSC
T ss_pred             CCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            55555543  55555555555555555554

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.70  E-value=1.3e-08  Score=49.68  Aligned_cols=32  Identities=22%  Similarity=0.411  Sum_probs=30.0

Q ss_pred             cccccccccccccCHHHHHHHHHHhcCCCCCee
Q psy7450          19 FRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQ   51 (161)
Q Consensus        19 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~   51 (161)
                      +||.|+.|++.|...+.|..|+++|++ +++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~-~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHEL-LGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTT-TCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCC-CCCCC
Confidence            589999999999999999999999999 98875

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=1.5e-08  Score=50.19  Aligned_cols=28  Identities=29%  Similarity=0.693  Sum_probs=14.2

Q ss_pred             CCCeecCCcCCccCchHHHHHHHHhhCC
Q psy7450          47 EPRYQCPHCPYRGKQKVHLKTHVAIKHQ   74 (161)
Q Consensus        47 ~k~~~C~~C~~~f~~~~~l~~H~r~h~~   74 (161)
                      ++||.|..|++.|...+.|..|+++|++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elt_A            7 GKPYKCPQCSYASAIKANLNVHLRKHTG   34 (36)
T ss_dssp             CCSEECSSSSCEESSHHHHHHHHHHHTC
T ss_pred             CCCCCCCCCCcccCCHHHHHHHHHHccC
Confidence            4455555555555555555555555444

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.68  E-value=1.4e-08  Score=50.34  Aligned_cols=31  Identities=23%  Similarity=0.544  Sum_probs=16.6

Q ss_pred             hcCCCCCeecCCcCCccCchHHHHHHHHhhCC
Q psy7450          43 ECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQ   74 (161)
Q Consensus        43 h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~   74 (161)
                      |++ ++||.|..|++.|...+.|..|+++|++
T Consensus         4 h~~-~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elq_A            4 GSS-GKPFKCSLCEYATRSKSNLKAHMNRHST   34 (36)
T ss_dssp             SCC-CCSEECSSSSCEESCHHHHHHHHHHSST
T ss_pred             CCC-CCCccCCCCCchhCCHHHHHHHHHHhcc
Confidence            344 5555555555555555555555555544

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.67  E-value=1.5e-08  Score=50.75  Aligned_cols=31  Identities=23%  Similarity=0.252  Sum_probs=18.5

Q ss_pred             CCCCcccccccccccccCHHHHHHH-HHHhcC
Q psy7450          15 PLLQFRYTCDSCGKVYKLKRSLYRH-RTLECG   45 (161)
Q Consensus        15 h~~~k~~~C~~C~~~f~~~~~l~~H-~~~h~~   45 (161)
                      |++++||.|+.|++.|...+.|..| ++.|++
T Consensus         4 H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            4 GSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             SSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             cCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            5556666666666666666666666 555554

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.67  E-value=1.7e-08  Score=50.68  Aligned_cols=31  Identities=19%  Similarity=0.329  Sum_probs=17.3

Q ss_pred             CCCeecC--CcCCccCchHHHHHHHHhhCCCCC
Q psy7450          47 EPRYQCP--HCPYRGKQKVHLKTHVAIKHQGPE   77 (161)
Q Consensus        47 ~k~~~C~--~C~~~f~~~~~l~~H~r~h~~~~~   77 (161)
                      ++||.|.  .|++.|...+.|..|+++|+++++
T Consensus         4 ~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~   36 (38)
T 1bhi_A            4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLK   36 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHHTTTT
T ss_pred             CcceECCCCCCCcccCCHHHHHHHHHHhCCCCC
Confidence            5555555  355555555555555555555544

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.67  E-value=1.2e-08  Score=50.96  Aligned_cols=28  Identities=18%  Similarity=0.419  Sum_probs=13.8

Q ss_pred             CCCeecCCcCCccCch-HHHHHHHHhhCC
Q psy7450          47 EPRYQCPHCPYRGKQK-VHLKTHVAIKHQ   74 (161)
Q Consensus        47 ~k~~~C~~C~~~f~~~-~~l~~H~r~h~~   74 (161)
                      ++||.|..|++.|... +.|..|+++|++
T Consensus         7 ~k~~~C~~C~k~f~~~~~~L~~H~~~H~~   35 (37)
T 2elp_A            7 GRAMKCPYCDFYFMKNGSDLQRHIWAHEG   35 (37)
T ss_dssp             CCCEECSSSSCEECSSCHHHHHHHHHHHT
T ss_pred             CCCeECCCCChhhccCHHHHHHHHHhcCC
Confidence            4445555555555544 455555544443

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.67  E-value=1.6e-08  Score=50.80  Aligned_cols=35  Identities=14%  Similarity=0.285  Sum_probs=32.5

Q ss_pred             CCCCcccccc--cccccccCHHHHHHHHHHhcCCCCCe
Q psy7450          15 PLLQFRYTCD--SCGKVYKLKRSLYRHRTLECGKEPRY   50 (161)
Q Consensus        15 h~~~k~~~C~--~C~~~f~~~~~l~~H~~~h~~~~k~~   50 (161)
                      |++++||.|.  .|++.|...+.|..|+++|++ +++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~-~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEM-TLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHT-TTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCC-CCCC
Confidence            6789999999  599999999999999999999 8876

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=3.6e-10  Score=66.34  Aligned_cols=52  Identities=21%  Similarity=0.228  Sum_probs=45.8

Q ss_pred             HHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCcccc
Q psy7450          35 SLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLS   90 (161)
Q Consensus        35 ~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~   90 (161)
                      .|..|+..+.+ ++++.|..|++.|. .+.|..|+ .+.++++ +.|+.|++.|..
T Consensus         4 ~L~~H~~~~c~-~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~-~~C~~C~~~~~~   55 (75)
T 2d9k_A            4 GSSGHEETECP-LRLAVCQHCDLELS-ILKLKEHE-DYCGART-ELCGNCGRNVLV   55 (75)
T ss_dssp             CCSCCCCCCCC-CCCEECSSSCCEEC-HHHHHHHH-HHHHHCE-EECSSSCCEEET
T ss_pred             HHHhhCcccCC-CcccCCcccChHhh-HHHHHHHH-hHcCCCc-eEcccCCCcCcH
Confidence            45667778888 99999999999995 89999999 8899898 999999998763

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.65  E-value=1.7e-08  Score=50.03  Aligned_cols=28  Identities=18%  Similarity=0.398  Sum_probs=15.1

Q ss_pred             CCCeecCCcCCccCchHHHHHHHHhhCC
Q psy7450          47 EPRYQCPHCPYRGKQKVHLKTHVAIKHQ   74 (161)
Q Consensus        47 ~k~~~C~~C~~~f~~~~~l~~H~r~h~~   74 (161)
                      ++||.|..|++.|...+.|..|+++|++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elv_A            7 GLLYDCHICERKFKNELDRDRHMLVHGD   34 (36)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHTTTST
T ss_pred             CCCeECCCCCCccCCHHHHHHHHHHhcC
Confidence            4555555555555555555555555544

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.64  E-value=2.4e-08  Score=49.39  Aligned_cols=31  Identities=32%  Similarity=0.474  Sum_probs=17.0

Q ss_pred             CCCCcccccccccccccCHHHHHHHHHHhcC
Q psy7450          15 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECG   45 (161)
Q Consensus        15 h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~   45 (161)
                      |+++++|.|+.|++.|.....|..|+++|++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTA   34 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSS
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcC
Confidence            4555555555555555555555555555554

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.64  E-value=2.8e-08  Score=50.29  Aligned_cols=31  Identities=16%  Similarity=0.171  Sum_probs=29.5

Q ss_pred             CCCCccccccc--ccccccCHHHHHHHHHHhcC
Q psy7450          15 PLLQFRYTCDS--CGKVYKLKRSLYRHRTLECG   45 (161)
Q Consensus        15 h~~~k~~~C~~--C~~~f~~~~~l~~H~~~h~~   45 (161)
                      +++++||.|+.  |++.|...+.|..|+++|++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg   36 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTA   36 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            78999999986  99999999999999999998

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=3.2e-08  Score=48.97  Aligned_cols=29  Identities=24%  Similarity=0.352  Sum_probs=15.9

Q ss_pred             CCCeecCCcCCccCchHHHHHHHHhhCCC
Q psy7450          47 EPRYQCPHCPYRGKQKVHLKTHVAIKHQG   75 (161)
Q Consensus        47 ~k~~~C~~C~~~f~~~~~l~~H~r~h~~~   75 (161)
                      ++||.|..|++.|...+.|..|+++|+++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            7 GKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            45555555555555555555555555543

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=1e-08  Score=51.36  Aligned_cols=34  Identities=24%  Similarity=0.399  Sum_probs=30.6

Q ss_pred             HHhcCCCCCeecCCcCCccCchHHHHHH-HHhhCCC
Q psy7450          41 TLECGKEPRYQCPHCPYRGKQKVHLKTH-VAIKHQG   75 (161)
Q Consensus        41 ~~h~~~~k~~~C~~C~~~f~~~~~l~~H-~r~h~~~   75 (161)
                      ++|++ ++||.|..|++.|...+.|..| +++|+++
T Consensus         2 ~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSS-GHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSS-SCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCC-CcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            35788 9999999999999999999999 8888764

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=2.2e-08  Score=49.92  Aligned_cols=31  Identities=19%  Similarity=0.195  Sum_probs=29.9

Q ss_pred             CCCCcccccccccccccCH-HHHHHHHHHhcC
Q psy7450          15 PLLQFRYTCDSCGKVYKLK-RSLYRHRTLECG   45 (161)
Q Consensus        15 h~~~k~~~C~~C~~~f~~~-~~l~~H~~~h~~   45 (161)
                      |++++||.|+.|++.|... +.|..|+++|++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~   35 (37)
T 2elp_A            4 GSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEG   35 (37)
T ss_dssp             CCCCCCEECSSSSCEECSSCHHHHHHHHHHHT
T ss_pred             CCCCCCeECCCCChhhccCHHHHHHHHHhcCC
Confidence            8999999999999999999 999999999988

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=3.1e-08  Score=48.98  Aligned_cols=31  Identities=23%  Similarity=0.328  Sum_probs=30.0

Q ss_pred             CCCCcccccccccccccCHHHHHHHHHHhcC
Q psy7450          15 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECG   45 (161)
Q Consensus        15 h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~   45 (161)
                      |++++||.|..|++.|.....|..|+++|++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRKHTG   34 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHHHTC
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHHccC
Confidence            8899999999999999999999999999988

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.62  E-value=4.1e-08  Score=48.49  Aligned_cols=34  Identities=21%  Similarity=0.229  Sum_probs=30.9

Q ss_pred             HhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCC
Q psy7450          42 LECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGP   76 (161)
Q Consensus        42 ~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~   76 (161)
                      +|++ +++|.|.+|++.|...+.|..|+++|++++
T Consensus         3 ~h~~-~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSS-GKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCC-CSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCC-CCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            4677 899999999999999999999999998864

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.60  E-value=2.3e-08  Score=53.18  Aligned_cols=34  Identities=29%  Similarity=0.366  Sum_probs=18.7

Q ss_pred             hcCCCCCeecCCcCCccCchHHHHHHHH-hhCCCCC
Q psy7450          43 ECGKEPRYQCPHCPYRGKQKVHLKTHVA-IKHQGPE   77 (161)
Q Consensus        43 h~~~~k~~~C~~C~~~f~~~~~l~~H~r-~h~~~~~   77 (161)
                      |++ ++||.|.+|++.|...+.|..|++ +|+++..
T Consensus         2 Ht~-~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            2 EDR-DKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             CTT-TSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCC-CcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            445 566666666666666666666666 5555443

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.59  E-value=1.7e-08  Score=50.43  Aligned_cols=25  Identities=20%  Similarity=0.351  Sum_probs=17.9

Q ss_pred             cCCCCCeecCCcCCccCchHHHHHHH
Q psy7450          44 CGKEPRYQCPHCPYRGKQKVHLKTHV   69 (161)
Q Consensus        44 ~~~~k~~~C~~C~~~f~~~~~l~~H~   69 (161)
                      .| ++||.|++|+++|.+.++|.+|+
T Consensus         4 ~g-ekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LK-PARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SS-CCCCEETTTTEECSCHHHHHHHH
T ss_pred             CC-ccCeECCCCCCccCCHhHccCcC
Confidence            45 67777777777777777777776

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.59  E-value=3.7e-08  Score=48.77  Aligned_cols=31  Identities=16%  Similarity=0.203  Sum_probs=29.9

Q ss_pred             CCCCcccccccccccccCHHHHHHHHHHhcC
Q psy7450          15 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECG   45 (161)
Q Consensus        15 h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~   45 (161)
                      |++++||.|..|++.|.....|..|+++|++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMNRHST   34 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHHHSST
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHHHhcc
Confidence            8899999999999999999999999999987

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.58  E-value=3.1e-08  Score=49.04  Aligned_cols=31  Identities=19%  Similarity=0.328  Sum_probs=29.8

Q ss_pred             CCCCcccccccccccccCHHHHHHHHHHhcC
Q psy7450          15 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECG   45 (161)
Q Consensus        15 h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~   45 (161)
                      |++++||.|..|++.|...+.|..|+++|++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHMLVHGD   34 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTTTST
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHhcC
Confidence            8899999999999999999999999999987

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.55  E-value=6.6e-08  Score=47.80  Aligned_cols=31  Identities=32%  Similarity=0.545  Sum_probs=29.7

Q ss_pred             CCCCcccccccccccccCHHHHHHHHHHhcC
Q psy7450          15 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECG   45 (161)
Q Consensus        15 h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~   45 (161)
                      |++++||.|+.|++.|.....|..|+++|++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTN   34 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCC
Confidence            7889999999999999999999999999988

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.54  E-value=3.7e-08  Score=52.37  Aligned_cols=31  Identities=32%  Similarity=0.481  Sum_probs=30.0

Q ss_pred             CCCCcccccccccccccCHHHHHHHHH-HhcC
Q psy7450          15 PLLQFRYTCDSCGKVYKLKRSLYRHRT-LECG   45 (161)
Q Consensus        15 h~~~k~~~C~~C~~~f~~~~~l~~H~~-~h~~   45 (161)
                      |++++||.|.+|++.|.....|..|++ +|++
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~   33 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLA   33 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCC
Confidence            899999999999999999999999999 9998

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.51  E-value=9.7e-08  Score=44.81  Aligned_cols=28  Identities=18%  Similarity=0.300  Sum_probs=19.2

Q ss_pred             CCeecCCcCCccCchHHHHHHHHhhCCC
Q psy7450          48 PRYQCPHCPYRGKQKVHLKTHVAIKHQG   75 (161)
Q Consensus        48 k~~~C~~C~~~f~~~~~l~~H~r~h~~~   75 (161)
                      +||.|..|++.|...+.|..|+++|+++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            5667777777777777777777766654

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.50  E-value=2.3e-07  Score=52.80  Aligned_cols=37  Identities=16%  Similarity=0.116  Sum_probs=22.8

Q ss_pred             CCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCC
Q psy7450          47 EPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQG   85 (161)
Q Consensus        47 ~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~   85 (161)
                      ++||.|.+|++.|...+.|.+|+++|+++.  ..+..++
T Consensus        11 ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~--~~~~~~~   47 (66)
T 2epp_A           11 AGILPCGLCGKVFTDANRLRQHEAQHGVTS--LQLGYID   47 (66)
T ss_dssp             CCCCCCTTTCCCCSCHHHHHHHHHHHTTTS--CCCCSCC
T ss_pred             ccCcCCCCCCCccCCHHHHHhhhhhhCCCc--ccccccc
Confidence            566666666666666666666666666643  3344444

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.50  E-value=8.3e-08  Score=47.88  Aligned_cols=31  Identities=32%  Similarity=0.518  Sum_probs=16.1

Q ss_pred             CCCCccccccc--ccccccCHHHHHHHHHHhcC
Q psy7450          15 PLLQFRYTCDS--CGKVYKLKRSLYRHRTLECG   45 (161)
Q Consensus        15 h~~~k~~~C~~--C~~~f~~~~~l~~H~~~h~~   45 (161)
                      |++++||.|.+  |++.|...+.|..|+++|++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   35 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTG   35 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            44555555542  55555555555555555544

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.49  E-value=1.3e-07  Score=44.37  Aligned_cols=29  Identities=38%  Similarity=0.763  Sum_probs=20.7

Q ss_pred             CCeecCCcCCccCchHHHHHHHHhhCCCC
Q psy7450          48 PRYQCPHCPYRGKQKVHLKTHVAIKHQGP   76 (161)
Q Consensus        48 k~~~C~~C~~~f~~~~~l~~H~r~h~~~~   76 (161)
                      ++|.|..|++.|...+.|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            35777777777777777777777777654

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.49  E-value=1e-07  Score=44.53  Aligned_cols=28  Identities=29%  Similarity=0.689  Sum_probs=19.8

Q ss_pred             CCeecCCcCCccCchHHHHHHHHhhCCC
Q psy7450          48 PRYQCPHCPYRGKQKVHLKTHVAIKHQG   75 (161)
Q Consensus        48 k~~~C~~C~~~f~~~~~l~~H~r~h~~~   75 (161)
                      +||.|..|++.|...+.|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            4677777777777777777777777654

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.49  E-value=4e-08  Score=51.92  Aligned_cols=36  Identities=14%  Similarity=0.275  Sum_probs=19.1

Q ss_pred             CccccCCCCCcccccc--cccccccCHHHHHHHHHHhcC
Q psy7450           9 PHTLFNPLLQFRYTCD--SCGKVYKLKRSLYRHRTLECG   45 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~--~C~~~f~~~~~l~~H~~~h~~   45 (161)
                      .|... |++++||.|+  .|++.|...+.|..|+++|++
T Consensus         8 ~~~~~-H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~   45 (47)
T 1ncs_A            8 DKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             GGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             HHHhc-cCCCCCeECCCCCCCCccCCHHHHHHHHHHccC
Confidence            33344 5555555553  455555555555555555554

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.48  E-value=1.1e-07  Score=47.43  Aligned_cols=33  Identities=15%  Similarity=0.206  Sum_probs=29.8

Q ss_pred             hcCCCCCeecCC--cCCccCchHHHHHHHHhhCCCC
Q psy7450          43 ECGKEPRYQCPH--CPYRGKQKVHLKTHVAIKHQGP   76 (161)
Q Consensus        43 h~~~~k~~~C~~--C~~~f~~~~~l~~H~r~h~~~~   76 (161)
                      +++ ++||.|.+  |++.|...+.|..|+++|++++
T Consensus         3 ~~~-~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            3 PGK-KKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSS-CCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCC-CCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            567 89999984  9999999999999999998864

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.47  E-value=6e-08  Score=48.41  Aligned_cols=26  Identities=27%  Similarity=0.543  Sum_probs=24.7

Q ss_pred             CCCCcccccccccccccCHHHHHHHH
Q psy7450          15 PLLQFRYTCDSCGKVYKLKRSLYRHR   40 (161)
Q Consensus        15 h~~~k~~~C~~C~~~f~~~~~l~~H~   40 (161)
                      +.+++||.|+.|++.|...++|..|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            57899999999999999999999997

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.47  E-value=1.6e-07  Score=43.73  Aligned_cols=27  Identities=22%  Similarity=0.406  Sum_probs=16.9

Q ss_pred             CeecCCcCCccCchHHHHHHHHhhCCC
Q psy7450          49 RYQCPHCPYRGKQKVHLKTHVAIKHQG   75 (161)
Q Consensus        49 ~~~C~~C~~~f~~~~~l~~H~r~h~~~   75 (161)
                      ||.|..|++.|...+.|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            566666666666666666666666554

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.44  E-value=7.4e-09  Score=50.15  Aligned_cols=30  Identities=23%  Similarity=0.415  Sum_probs=20.3

Q ss_pred             CCeecCCcCCccCchHHHHHHHHhhCCCCC
Q psy7450          48 PRYQCPHCPYRGKQKVHLKTHVAIKHQGPE   77 (161)
Q Consensus        48 k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~   77 (161)
                      +||.|..|++.|...+.|..|+++|+++++
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp   30 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVA   30 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSS
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCC
Confidence            356677777777777777777776666665

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.42  E-value=2.5e-07  Score=44.29  Aligned_cols=28  Identities=18%  Similarity=0.284  Sum_probs=19.0

Q ss_pred             CCeecC--CcCCccCchHHHHHHHHhhCCC
Q psy7450          48 PRYQCP--HCPYRGKQKVHLKTHVAIKHQG   75 (161)
Q Consensus        48 k~~~C~--~C~~~f~~~~~l~~H~r~h~~~   75 (161)
                      +||.|.  .|++.|...+.|..|+++|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            566676  6777777777777777766654

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.42  E-value=1.9e-07  Score=43.45  Aligned_cols=27  Identities=22%  Similarity=0.379  Sum_probs=16.6

Q ss_pred             CeecCCcCCccCchHHHHHHHHhhCCC
Q psy7450          49 RYQCPHCPYRGKQKVHLKTHVAIKHQG   75 (161)
Q Consensus        49 ~~~C~~C~~~f~~~~~l~~H~r~h~~~   75 (161)
                      ||.|..|++.|...+.|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcCC
Confidence            566666666666666666666666554

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.42  E-value=1.6e-08  Score=53.51  Aligned_cols=37  Identities=14%  Similarity=0.369  Sum_probs=32.5

Q ss_pred             HHHHhcCCCCCeecC--CcCCccCchHHHHHHHHhhCCCC
Q psy7450          39 HRTLECGKEPRYQCP--HCPYRGKQKVHLKTHVAIKHQGP   76 (161)
Q Consensus        39 H~~~h~~~~k~~~C~--~C~~~f~~~~~l~~H~r~h~~~~   76 (161)
                      |...|++ ++||.|.  .|++.|...+.|..|+++|++++
T Consensus         9 ~~~~H~~-~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            9 KYVKEMP-DKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GSCEEET-TTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHhccCC-CCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            3456889 9999996  79999999999999999999864

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.41  E-value=2.2e-07  Score=42.66  Aligned_cols=26  Identities=23%  Similarity=0.623  Sum_probs=18.3

Q ss_pred             CCCeecCCcCCccCchHHHHHHHHhh
Q psy7450          47 EPRYQCPHCPYRGKQKVHLKTHVAIK   72 (161)
Q Consensus        47 ~k~~~C~~C~~~f~~~~~l~~H~r~h   72 (161)
                      ++||.|..||+.|...+.|..|+++|
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHc
Confidence            35677777777777777777777665

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.41  E-value=1.7e-07  Score=43.56  Aligned_cols=28  Identities=32%  Similarity=0.567  Sum_probs=18.0

Q ss_pred             CCeecCCcCCccCchHHHHHHHHhhCCC
Q psy7450          48 PRYQCPHCPYRGKQKVHLKTHVAIKHQG   75 (161)
Q Consensus        48 k~~~C~~C~~~f~~~~~l~~H~r~h~~~   75 (161)
                      +||.|..|++.|...+.|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            3566666666666666666666666554

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.40  E-value=2e-07  Score=43.12  Aligned_cols=26  Identities=27%  Similarity=0.494  Sum_probs=17.7

Q ss_pred             CCeecCCcCCccCchHHHHHHHHhhC
Q psy7450          48 PRYQCPHCPYRGKQKVHLKTHVAIKH   73 (161)
Q Consensus        48 k~~~C~~C~~~f~~~~~l~~H~r~h~   73 (161)
                      +||.|..|++.|...+.|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcC
Confidence            56677777777777777777766654

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.39  E-value=2.4e-07  Score=44.03  Aligned_cols=28  Identities=18%  Similarity=0.300  Sum_probs=17.9

Q ss_pred             CCeecC--CcCCccCchHHHHHHHHhhCCC
Q psy7450          48 PRYQCP--HCPYRGKQKVHLKTHVAIKHQG   75 (161)
Q Consensus        48 k~~~C~--~C~~~f~~~~~l~~H~r~h~~~   75 (161)
                      +||.|.  .|++.|...+.|..|+++|+++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            356665  6666666666666666666654

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.35  E-value=1.9e-07  Score=43.01  Aligned_cols=25  Identities=20%  Similarity=0.490  Sum_probs=15.7

Q ss_pred             CCeecCCcCCccCchHHHHHHHHhh
Q psy7450          48 PRYQCPHCPYRGKQKVHLKTHVAIK   72 (161)
Q Consensus        48 k~~~C~~C~~~f~~~~~l~~H~r~h   72 (161)
                      +||.|..|++.|...+.|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            4566666666666666666666554

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.34  E-value=3.2e-07  Score=42.94  Aligned_cols=28  Identities=29%  Similarity=0.479  Sum_probs=26.3

Q ss_pred             CcccccccccccccCHHHHHHHHHHhcC
Q psy7450          18 QFRYTCDSCGKVYKLKRSLYRHRTLECG   45 (161)
Q Consensus        18 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~   45 (161)
                      ++||.|..|++.|.....|..|+++|++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~   28 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDT   28 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhcc
Confidence            4789999999999999999999999987

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.67  E-value=6.4e-08  Score=45.31  Aligned_cols=27  Identities=26%  Similarity=0.258  Sum_probs=16.2

Q ss_pred             CeecCCcCCccCchHHHHHHHHhhCCC
Q psy7450          49 RYQCPHCPYRGKQKVHLKTHVAIKHQG   75 (161)
Q Consensus        49 ~~~C~~C~~~f~~~~~l~~H~r~h~~~   75 (161)
                      ||.|..|++.|...+.|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            556666666666666666666665543

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.32  E-value=5.2e-07  Score=41.89  Aligned_cols=27  Identities=19%  Similarity=0.508  Sum_probs=25.5

Q ss_pred             cccccccccccccCHHHHHHHHHHhcC
Q psy7450          19 FRYTCDSCGKVYKLKRSLYRHRTLECG   45 (161)
Q Consensus        19 k~~~C~~C~~~f~~~~~l~~H~~~h~~   45 (161)
                      +||.|+.|++.|.....|..|+++|++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcC
Confidence            479999999999999999999999987

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.32  E-value=5.4e-07  Score=51.22  Aligned_cols=40  Identities=20%  Similarity=0.170  Sum_probs=33.8

Q ss_pred             CCCCcccccccccccccCHHHHHHHHHHhcCCCCCeecCCcC
Q psy7450          15 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCP   56 (161)
Q Consensus        15 h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~   56 (161)
                      +.+++||.|..|++.|.....|..|+++|++ +. ..+.+++
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg-~~-~~~~~~~   47 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGV-TS-LQLGYID   47 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTT-TS-CCCCSCC
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCC-Cc-ccccccc
Confidence            7889999999999999999999999999998 53 3444443

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.31  E-value=1.5e-08  Score=49.05  Aligned_cols=31  Identities=16%  Similarity=0.358  Sum_probs=28.9

Q ss_pred             cccccccccccccCHHHHHHHHHHhcCCCCCe
Q psy7450          19 FRYTCDSCGKVYKLKRSLYRHRTLECGKEPRY   50 (161)
Q Consensus        19 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~   50 (161)
                      +||.|+.|++.|...+.|..|+++|++ ++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~-~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFI-VVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSS-SSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHcc-CCCC
Confidence            589999999999999999999999999 8876

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.65  E-value=7.5e-08  Score=45.33  Aligned_cols=28  Identities=29%  Similarity=0.452  Sum_probs=16.2

Q ss_pred             CCeecCCcCCccCchHHHHHHHHhhCCC
Q psy7450          48 PRYQCPHCPYRGKQKVHLKTHVAIKHQG   75 (161)
Q Consensus        48 k~~~C~~C~~~f~~~~~l~~H~r~h~~~   75 (161)
                      +||.|..|++.|...+.|..|+++|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            4555666666666666666666555543

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.30  E-value=3.8e-07  Score=41.73  Aligned_cols=26  Identities=23%  Similarity=0.450  Sum_probs=15.9

Q ss_pred             CeecCCcCCccCchHHHHHHHHhhCC
Q psy7450          49 RYQCPHCPYRGKQKVHLKTHVAIKHQ   74 (161)
Q Consensus        49 ~~~C~~C~~~f~~~~~l~~H~r~h~~   74 (161)
                      ||.|..|++.|...+.|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            35666666666666666666666554

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.29  E-value=3.8e-07  Score=42.45  Aligned_cols=27  Identities=22%  Similarity=0.503  Sum_probs=25.6

Q ss_pred             cccccccccccccCHHHHHHHHHHhcC
Q psy7450          19 FRYTCDSCGKVYKLKRSLYRHRTLECG   45 (161)
Q Consensus        19 k~~~C~~C~~~f~~~~~l~~H~~~h~~   45 (161)
                      +||.|+.|++.|.....|..|+++|++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHEN   27 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGS
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcC
Confidence            589999999999999999999999988

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.28  E-value=5.2e-07  Score=41.83  Aligned_cols=28  Identities=32%  Similarity=0.629  Sum_probs=26.1

Q ss_pred             cccccccccccccCHHHHHHHHHHhcCCC
Q psy7450          19 FRYTCDSCGKVYKLKRSLYRHRTLECGKE   47 (161)
Q Consensus        19 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   47 (161)
                      +||.|..|++.|.....|..|+++|++ +
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~-~   28 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSG-E   28 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHT-C
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcC-C
Confidence            589999999999999999999999988 5

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.27  E-value=4.5e-07  Score=42.51  Aligned_cols=28  Identities=21%  Similarity=0.317  Sum_probs=18.0

Q ss_pred             CCeecCCcCCccCchHHHHHH-HHhhCCC
Q psy7450          48 PRYQCPHCPYRGKQKVHLKTH-VAIKHQG   75 (161)
Q Consensus        48 k~~~C~~C~~~f~~~~~l~~H-~r~h~~~   75 (161)
                      +||.|..|++.|...+.|..| +++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence            356676777777777777776 4566554

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.26  E-value=6.8e-07  Score=41.74  Aligned_cols=29  Identities=17%  Similarity=0.229  Sum_probs=26.5

Q ss_pred             cccccccccccccCHHHHHHHHHHhcCCCC
Q psy7450          19 FRYTCDSCGKVYKLKRSLYRHRTLECGKEP   48 (161)
Q Consensus        19 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k   48 (161)
                      +||.|..|++.|...+.|..|+++|++ ++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~-~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHS-KE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS-SC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHcc-CC
Confidence            479999999999999999999999988 54

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.25  E-value=4.4e-07  Score=41.91  Aligned_cols=28  Identities=32%  Similarity=0.713  Sum_probs=25.4

Q ss_pred             CcccccccccccccCHHHHHHHHHHhcC
Q psy7450          18 QFRYTCDSCGKVYKLKRSLYRHRTLECG   45 (161)
Q Consensus        18 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~   45 (161)
                      ++||.|+.|++.|.....|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4789999999999999999999998764

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.24  E-value=7.5e-07  Score=42.52  Aligned_cols=28  Identities=29%  Similarity=0.627  Sum_probs=26.2

Q ss_pred             Ccccccc--cccccccCHHHHHHHHHHhcC
Q psy7450          18 QFRYTCD--SCGKVYKLKRSLYRHRTLECG   45 (161)
Q Consensus        18 ~k~~~C~--~C~~~f~~~~~l~~H~~~h~~   45 (161)
                      ++||.|+  .|++.|...+.|..|+++|++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~   30 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccC
Confidence            4789999  899999999999999999988

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.23  E-value=6.2e-07  Score=41.52  Aligned_cols=27  Identities=19%  Similarity=0.359  Sum_probs=25.5

Q ss_pred             cccccccccccccCHHHHHHHHHHhcC
Q psy7450          19 FRYTCDSCGKVYKLKRSLYRHRTLECG   45 (161)
Q Consensus        19 k~~~C~~C~~~f~~~~~l~~H~~~h~~   45 (161)
                      +||.|..|++.|.....|..|+++|++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIA   27 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHS
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhcc
Confidence            589999999999999999999999988

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.22  E-value=6.3e-07  Score=41.04  Aligned_cols=27  Identities=11%  Similarity=0.274  Sum_probs=24.6

Q ss_pred             CcccccccccccccCHHHHHHHHHHhc
Q psy7450          18 QFRYTCDSCGKVYKLKRSLYRHRTLEC   44 (161)
Q Consensus        18 ~k~~~C~~C~~~f~~~~~l~~H~~~h~   44 (161)
                      ++||.|+.|++.|...+.|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            478999999999999999999998764

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.21  E-value=8.6e-07  Score=42.00  Aligned_cols=28  Identities=32%  Similarity=0.674  Sum_probs=25.9

Q ss_pred             cccccc--cccccccCHHHHHHHHHHhcCCC
Q psy7450          19 FRYTCD--SCGKVYKLKRSLYRHRTLECGKE   47 (161)
Q Consensus        19 k~~~C~--~C~~~f~~~~~l~~H~~~h~~~~   47 (161)
                      +||.|+  .|++.|...+.|..|+++|++ +
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~-~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTG-E   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSC-C
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcC-C
Confidence            589998  999999999999999999988 5

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.21  E-value=5e-07  Score=41.54  Aligned_cols=27  Identities=19%  Similarity=0.208  Sum_probs=24.4

Q ss_pred             CcccccccccccccCHHHHHHHHHHhc
Q psy7450          18 QFRYTCDSCGKVYKLKRSLYRHRTLEC   44 (161)
Q Consensus        18 ~k~~~C~~C~~~f~~~~~l~~H~~~h~   44 (161)
                      ++||.|+.|++.|...+.|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            478999999999999999999998763

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.46  E-value=2.4e-07  Score=43.23  Aligned_cols=27  Identities=30%  Similarity=0.501  Sum_probs=25.3

Q ss_pred             cccccccccccccCHHHHHHHHHHhcC
Q psy7450          19 FRYTCDSCGKVYKLKRSLYRHRTLECG   45 (161)
Q Consensus        19 k~~~C~~C~~~f~~~~~l~~H~~~h~~   45 (161)
                      +||.|+.|++.|...+.|..|+++|++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTG   27 (29)
Confidence            589999999999999999999999987

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.45  E-value=2.5e-07  Score=43.39  Aligned_cols=28  Identities=25%  Similarity=0.502  Sum_probs=26.0

Q ss_pred             CcccccccccccccCHHHHHHHHHHhcC
Q psy7450          18 QFRYTCDSCGKVYKLKRSLYRHRTLECG   45 (161)
Q Consensus        18 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~   45 (161)
                      ++||.|+.|++.|.....|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            4689999999999999999999999987

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.45  E-value=2.7e-07  Score=41.98  Aligned_cols=24  Identities=29%  Similarity=0.509  Sum_probs=14.3

Q ss_pred             CeecCCcCCccCchHHHHHHHHhh
Q psy7450          49 RYQCPHCPYRGKQKVHLKTHVAIK   72 (161)
Q Consensus        49 ~~~C~~C~~~f~~~~~l~~H~r~h   72 (161)
                      ||.|..||+.|...+.|..|+++|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            555666666666666666665554

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.13  E-value=1.3e-06  Score=39.86  Aligned_cols=26  Identities=27%  Similarity=0.617  Sum_probs=23.7

Q ss_pred             ccccccccccccCHHHHHHHHHHhcC
Q psy7450          20 RYTCDSCGKVYKLKRSLYRHRTLECG   45 (161)
Q Consensus        20 ~~~C~~C~~~f~~~~~l~~H~~~h~~   45 (161)
                      ||.|..|++.|.....|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            68999999999999999999999876

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.08  E-value=1.2e-06  Score=40.91  Aligned_cols=27  Identities=26%  Similarity=0.710  Sum_probs=24.8

Q ss_pred             cccccccccccccCHHHHHHH-HHHhcC
Q psy7450          19 FRYTCDSCGKVYKLKRSLYRH-RTLECG   45 (161)
Q Consensus        19 k~~~C~~C~~~f~~~~~l~~H-~~~h~~   45 (161)
                      +||.|+.|++.|...+.|..| +++|++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccC
Confidence            489999999999999999999 688887

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.05  E-value=2.7e-06  Score=39.28  Aligned_cols=25  Identities=24%  Similarity=0.460  Sum_probs=15.1

Q ss_pred             CeecC--CcCCccCchHHHHHHHHhhC
Q psy7450          49 RYQCP--HCPYRGKQKVHLKTHVAIKH   73 (161)
Q Consensus        49 ~~~C~--~C~~~f~~~~~l~~H~r~h~   73 (161)
                      +|.|.  .|++.|...+.|..|+++|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            45566  66666666666666666554

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.27  E-value=7.3e-07  Score=40.42  Aligned_cols=26  Identities=27%  Similarity=0.508  Sum_probs=23.6

Q ss_pred             cccccccccccccCHHHHHHHHHHhc
Q psy7450          19 FRYTCDSCGKVYKLKRSLYRHRTLEC   44 (161)
Q Consensus        19 k~~~C~~C~~~f~~~~~l~~H~~~h~   44 (161)
                      +||.|+.|++.|...+.|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            58999999999999999999998763

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.93  E-value=5.3e-06  Score=38.25  Aligned_cols=27  Identities=33%  Similarity=0.923  Sum_probs=24.7

Q ss_pred             cccccc--cccccccCHHHHHHHHHHhcC
Q psy7450          19 FRYTCD--SCGKVYKLKRSLYRHRTLECG   45 (161)
Q Consensus        19 k~~~C~--~C~~~f~~~~~l~~H~~~h~~   45 (161)
                      +||.|.  .|++.|...+.|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            479999  999999999999999998864

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.53  E-value=0.00026  Score=39.68  Aligned_cols=48  Identities=19%  Similarity=0.409  Sum_probs=40.5

Q ss_pred             cccccccCHHHHHHHH-HHhcCCCC------CeecC--CcCCccCchHHHHHHHHhhC
Q psy7450          25 SCGKVYKLKRSLYRHR-TLECGKEP------RYQCP--HCPYRGKQKVHLKTHVAIKH   73 (161)
Q Consensus        25 ~C~~~f~~~~~l~~H~-~~h~~~~k------~~~C~--~C~~~f~~~~~l~~H~r~h~   73 (161)
                      .|++.|.+...|..|+ ..|.+ .+      +|.|.  .|+..+.....|..|+++.+
T Consensus         8 ~C~~~f~~~~~l~~Hv~~~Hv~-~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            8 ECPESASSLFDLQRHLLKDHVS-QDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             TCCCCCSSHHHHHHHHHHHSCC-CCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CCCCcCCCHHHHHHHHHhhccC-cccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            4999999999999998 47877 44      79996  79999998999999998753

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=97.00  E-value=0.00011  Score=47.06  Aligned_cols=87  Identities=10%  Similarity=0.012  Sum_probs=52.3

Q ss_pred             CCCeecCCcCCccCchHHHHHHH--HhhCCCCCccccCCCCCccccccccCCCccchhhhhhhhhhcccCCCCCcCcccC
Q psy7450          47 EPRYQCPHCPYRGKQKVHLKTHV--AIKHQGPEMLSVKHQGPEMLSIKHQGPETLSIKHQVSEMLSIKHQGPETLSIKHQ  124 (161)
Q Consensus        47 ~k~~~C~~C~~~f~~~~~l~~H~--r~h~~~~~~~~C~~C~k~f~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  124 (161)
                      .+++.|..|...|...+.+..|.  +.|...-..+.+. ++........ .   +.        . ..+......+..+.
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~-~~~~~~~~~~-~---~~--------~-~~~~~~~~~~~~~~   95 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAI-NQGEDSVPAK-K---FK--------A-APAEISDGEDRSKC   95 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHH-TTCCCCCSCC-C---CS--------C-CSSCCSSCCCTTTE
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcc-cCcccCCCCC-c---cC--------C-CccccccCCCCCeE
Confidence            46778888888888888888887  4443221113331 1111110000 0   00        0 01223455678899


Q ss_pred             CCcccCcCcCCCcchhhccccccccccChhh
Q psy7450         125 GPEMLSIKHQGPESAFDLRRNNQAHLNGRKD  155 (161)
Q Consensus       125 c~~c~~~~~~~~~~~f~~~~~l~~H~~~~~~  155 (161)
                      |..|        ++.|.....|..|.+|++.
T Consensus        96 C~~C--------~~~f~s~~~~~~H~~gk~H  118 (127)
T 1zu1_A           96 CPVC--------NMTFSSPVVAESHYIGKTH  118 (127)
T ss_dssp             ETTT--------TEECSSHHHHHHHHTSHHH
T ss_pred             cCCC--------CCEeCCHHHHHHHHCCHHH
Confidence            9999        9999999999999998654

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.67  E-value=0.00039  Score=44.09  Aligned_cols=29  Identities=24%  Similarity=0.189  Sum_probs=20.2

Q ss_pred             HhcCCCCCeecCCcCCccCchHHHHHHHHh
Q psy7450          42 LECGKEPRYQCPHCPYRGKQKVHLKTHVAI   71 (161)
Q Consensus        42 ~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~   71 (161)
                      .++| +++|.|..|++.|.+.+.|..|+++
T Consensus        44 d~tG-ekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           44 DLPG-GGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSGG-GGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             cCCC-CcceEcccCcchhCCHHHHHHHHhh
Confidence            4667 7777777777777777777777654

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.30  E-value=0.00053  Score=43.48  Aligned_cols=34  Identities=12%  Similarity=-0.003  Sum_probs=30.5

Q ss_pred             ccCCCCCcCcccCCCcccCcCcCCCcchhhccccccccccCh
Q psy7450         112 KHQGPETLSIKHQGPEMLSIKHQGPESAFDLRRNNQAHLNGR  153 (161)
Q Consensus       112 ~~~~~~~~~~~~~c~~c~~~~~~~~~~~f~~~~~l~~H~~~~  153 (161)
                      .....++++.+|.|..|        ++.|.....|..|+++.
T Consensus        40 ~~ded~tGekpfyC~~C--------~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           40 EFDPDLPGGGLHRCLAC--------ARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SSCSSSGGGGCSEETTT--------TEECSSHHHHHHHTTCH
T ss_pred             cccccCCCCcceEcccC--------cchhCCHHHHHHHHhhh
Confidence            45667889999999999        99999999999999873

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.89  E-value=0.011  Score=37.62  Aligned_cols=71  Identities=13%  Similarity=0.009  Sum_probs=39.7

Q ss_pred             CcccccccccccccCHHHHHHHH--HHhcCCCCCeecCC------cCCccCchHHHHHHHHhhCCCCCccccCCCCCccc
Q psy7450          18 QFRYTCDSCGKVYKLKRSLYRHR--TLECGKEPRYQCPH------CPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEML   89 (161)
Q Consensus        18 ~k~~~C~~C~~~f~~~~~l~~H~--~~h~~~~k~~~C~~------C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~   89 (161)
                      .+++.|..|...|.+.+.+..|.  +.|....+.+.+..      -++.+....    +.....+... |-|..|++.|.
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-~~C~~C~~~f~  104 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRS-KCCPVCNMTFS  104 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTT-TEETTTTEECS
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCCC-eEcCCCCCEeC
Confidence            36789999999999999998887  34432111222110      111221110    1112233344 78888888887


Q ss_pred             cccc
Q psy7450          90 SIKH   93 (161)
Q Consensus        90 ~~~~   93 (161)
                      +...
T Consensus       105 s~~~  108 (127)
T 1zu1_A          105 SPVV  108 (127)
T ss_dssp             SHHH
T ss_pred             CHHH
Confidence            7654

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.83  E-value=0.0068  Score=31.26  Aligned_cols=23  Identities=26%  Similarity=0.520  Sum_probs=18.0

Q ss_pred             CCeecCCcCCccCchHHHHHHHH
Q psy7450          48 PRYQCPHCPYRGKQKVHLKTHVA   70 (161)
Q Consensus        48 k~~~C~~C~~~f~~~~~l~~H~r   70 (161)
                      .+|.|+.|+..|.....|+.||+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            45778888888888888888877

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=93.58  E-value=0.051  Score=28.01  Aligned_cols=27  Identities=22%  Similarity=0.501  Sum_probs=23.9

Q ss_pred             cccccccccccccCHHHHHHHHHHhcC
Q psy7450          19 FRYTCDSCGKVYKLKRSLYRHRTLECG   45 (161)
Q Consensus        19 k~~~C~~C~~~f~~~~~l~~H~~~h~~   45 (161)
                      .+|.|+.|+..|.....|..|++---+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycCp   37 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCCP   37 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHCT
T ss_pred             CceeCCcccccccchHHHHhhhhhcCc
Confidence            689999999999999999999985544

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=93.41  E-value=0.096  Score=28.92  Aligned_cols=37  Identities=16%  Similarity=0.123  Sum_probs=29.4

Q ss_pred             CcCCccCchHHHHHHH-HhhCCCC-----CccccC--CCCCcccc
Q psy7450          54 HCPYRGKQKVHLKTHV-AIKHQGP-----EMLSVK--HQGPEMLS   90 (161)
Q Consensus        54 ~C~~~f~~~~~l~~H~-r~h~~~~-----~~~~C~--~C~k~f~~   90 (161)
                      .|++.|.+...|..|+ +.|.+.+     +.|.|.  .|++.+..
T Consensus         8 ~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~   52 (64)
T 1zw8_A            8 ECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDD   52 (64)
T ss_dssp             TCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESS
T ss_pred             CCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCC
Confidence            4999999999999998 4677655     249997  78887654

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=91.70  E-value=0.31  Score=28.01  Aligned_cols=39  Identities=23%  Similarity=0.357  Sum_probs=22.7

Q ss_pred             CeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCccc
Q psy7450          49 RYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEML   89 (161)
Q Consensus        49 ~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~   89 (161)
                      -|.|..||.++. +..+..|...-.+... |.|-.|++.|.
T Consensus        10 ~F~C~~Cgd~lK-K~kv~~H~~~Cr~~~~-~SCIDC~~~F~   48 (79)
T 1wjv_A           10 FFTCNACGESVK-KIQVEKHVSNCRNCEC-LSCIDCGKDFW   48 (79)
T ss_dssp             EEEESSSCCEEE-TTHHHHHHHHCTTCCE-EEETTTTEEEE
T ss_pred             EEEcCCCCCeee-cccchhHHhhCCCCCc-EEecccCCeeC
Confidence            466777776544 3345666544433334 67777777775

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=90.22  E-value=0.24  Score=32.77  Aligned_cols=66  Identities=23%  Similarity=0.410  Sum_probs=43.4

Q ss_pred             ccc--ccccccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCccccc
Q psy7450          21 YTC--DSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSI   91 (161)
Q Consensus        21 ~~C--~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~~   91 (161)
                      ..|  ..|+..+. ...+..|... -. ..+..|+.|+..+ ....|..|....-..+. -.|+.|+..|...
T Consensus        83 v~C~n~GC~~~~~-~~~l~~H~~~-C~-~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~-~~C~~C~~~~~~~  150 (170)
T 3hcs_A           83 VKCPNEGCLHKME-LRHLEDHQAH-CE-FALMDCPQCQRPF-QKFHINIHILKDCPRRQ-VSCDNCAASMAFE  150 (170)
T ss_dssp             EECCSTTCCCEEE-GGGHHHHHTT-CT-TSEEECTTTCCEE-EGGGHHHHHHHTCTTCE-EECTTTCCEEEGG
T ss_pred             cCCCCCCCCceec-HhHHHHHHhc-CC-ceeeECCCCChHH-HHHHHHHHhhhhCCCCC-eECCCCCCccCHH
Confidence            445  35665544 3456677632 23 4677888888877 55668888876566665 7899998877643

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=90.11  E-value=0.046  Score=31.51  Aligned_cols=48  Identities=23%  Similarity=0.359  Sum_probs=35.5

Q ss_pred             cccccccccccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHH
Q psy7450          19 FRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHV   69 (161)
Q Consensus        19 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~   69 (161)
                      --|.|+.||..++- ..|..|...-.+ ...|.|..|++.|... .++.|.
T Consensus         9 V~F~C~~Cgd~lKK-~kv~~H~~~Cr~-~~~~SCIDC~~~F~~~-~y~~Ht   56 (79)
T 1wjv_A            9 VFFTCNACGESVKK-IQVEKHVSNCRN-CECLSCIDCGKDFWGD-DYKSHV   56 (79)
T ss_dssp             CEEEESSSCCEEET-THHHHHHHHCTT-CCEEEETTTTEEEEGG-GTTTCC
T ss_pred             eEEEcCCCCCeeec-ccchhHHhhCCC-CCcEEecccCCeeCCC-CEeCEe
Confidence            45899999988875 458889765444 4579999999999864 344443

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=88.86  E-value=0.53  Score=22.47  Aligned_cols=25  Identities=24%  Similarity=0.405  Sum_probs=16.5

Q ss_pred             CeecCCcCCccCchHHHHHHHHhhC
Q psy7450          49 RYQCPHCPYRGKQKVHLKTHVAIKH   73 (161)
Q Consensus        49 ~~~C~~C~~~f~~~~~l~~H~r~h~   73 (161)
                      .|.|+.|.+.|.+...|..|-...|
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H   29 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVH   29 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhcc
Confidence            3667777777777777777765443

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=88.67  E-value=0.42  Score=31.58  Aligned_cols=39  Identities=15%  Similarity=0.135  Sum_probs=19.4

Q ss_pred             CCeec--CCcCCccCchHHHHHHHHhhCCCCCccccCCCCCccc
Q psy7450          48 PRYQC--PHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEML   89 (161)
Q Consensus        48 k~~~C--~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~   89 (161)
                      ....|  ..|+.... ...+..|...- .-.+ ..|+.|+..+.
T Consensus        81 l~v~C~n~GC~~~~~-~~~l~~H~~~C-~~~~-v~C~~C~~~~~  121 (170)
T 3hcs_A           81 LMVKCPNEGCLHKME-LRHLEDHQAHC-EFAL-MDCPQCQRPFQ  121 (170)
T ss_dssp             SEEECCSTTCCCEEE-GGGHHHHHTTC-TTSE-EECTTTCCEEE
T ss_pred             cccCCCCCCCCceec-HhHHHHHHhcC-Ccee-eECCCCChHHH
Confidence            34455  34554433 44556665321 1223 66777776664

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=85.32  E-value=0.65  Score=28.26  Aligned_cols=11  Identities=9%  Similarity=0.002  Sum_probs=9.9

Q ss_pred             ccccCCCCCcc
Q psy7450          78 MLSVKHQGPEM   88 (161)
Q Consensus        78 ~~~C~~C~k~f   88 (161)
                      +|.|..||..|
T Consensus        67 p~~C~~CG~~F   77 (105)
T 2gmg_A           67 PAQCRKCGFVF   77 (105)
T ss_dssp             CCBBTTTCCBC
T ss_pred             CcChhhCcCee
Confidence            39999999999

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=82.71  E-value=1.9  Score=20.71  Aligned_cols=23  Identities=13%  Similarity=0.158  Sum_probs=13.0

Q ss_pred             CCeecCCcCCccCchHHHHHHHH
Q psy7450          48 PRYQCPHCPYRGKQKVHLKTHVA   70 (161)
Q Consensus        48 k~~~C~~C~~~f~~~~~l~~H~r   70 (161)
                      .++.|..|+-+|....++..|.+
T Consensus         7 ~~~~C~~C~IsF~~l~ty~aHKk   29 (36)
T 1fu9_A            7 MKKYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             CCSEETTTTEECSSHHHHHHHHH
T ss_pred             CcCeeccccceehhhHHHhhhhe
Confidence            34555666666665555555554

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=82.55  E-value=0.77  Score=26.95  Aligned_cols=27  Identities=26%  Similarity=0.358  Sum_probs=18.6

Q ss_pred             CCeecCCcCCccCchHHHHHHHHhhCCCCC
Q psy7450          48 PRYQCPHCPYRGKQKVHLKTHVAIKHQGPE   77 (161)
Q Consensus        48 k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~   77 (161)
                      .-..|.+||+.|..   |.+|+.+++|..|
T Consensus        20 d~iiClecGK~fK~---LkRHL~~~hgltp   46 (87)
T 2jsp_A           20 DHIVCLECGGSFKS---LKRHLTTHHSMTP   46 (87)
T ss_dssp             SCEECTBTCCEESB---HHHHHHHTTCSCH
T ss_pred             CceEecccchhhHH---HHHHHHHccCCCH
Confidence            34577888887773   5678887766654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	161
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.72
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.6
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.37
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.35
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.34
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.33
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.32
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.31
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.25
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.22
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.19
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.18
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.18
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.17
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.16
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.15
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.13
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.13
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.08
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.06
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.05
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.04
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.03
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.99
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.97
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.96
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.95
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.92
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.89
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.89
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.79
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.76
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.73
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.65
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.63
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.63
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.53
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.51
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.42
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.41
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.39
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.34
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.25
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.2
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.18
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.09
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.06
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.05
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.04
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.02
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.94
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.92
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.87
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.79
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.76
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.73
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.72
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.64
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.54
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.49
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.49
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.44
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.44
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.39
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.37
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.35
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.22
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.22
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.16
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.06
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.06
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.05
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.05
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.94
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.92
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.92
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.86
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.85
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.84
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.45
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.38
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.32
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.28
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.23
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.11
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.11
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.08
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.69
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.61
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.42
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.1
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	94.93
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.66
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.43
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.3
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.27
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	93.92
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	93.68
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	92.79
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	92.58
d1y0jb1	36	U-shaped transcription factor, different fingers {	92.29
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	91.86
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	91.82
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	90.95
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	89.39
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	89.05
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	88.52
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	87.89
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	87.36
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	86.42
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	85.73
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	85.07
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	84.14
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	82.68
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	82.37
d1lkoa2	44	Rubrerythrin, C-terminal domain {Desulfovibrio vul	80.71

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=3.2e-18  Score=93.10  Aligned_cols=53  Identities=34%  Similarity=0.592  Sum_probs=50.7

Q ss_pred             CcccccccccccccCHHHHHHHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhh
Q psy7450          18 QFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIK   72 (161)
Q Consensus        18 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h   72 (161)
                      ++||.|+ ||+.|.....|..|+++|+| ++||.|.+||++|...+.|.+|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~-ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLG-LRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSC-CCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhcccc-ccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            6899995 99999999999999999999 99999999999999999999999876

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=1.9e-16  Score=85.93  Aligned_cols=45  Identities=16%  Similarity=0.248  Sum_probs=42.7

Q ss_pred             CCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCCccccccc
Q psy7450          47 EPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKH   93 (161)
Q Consensus        47 ~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k~f~~~~~   93 (161)
                      |+||.| .||++|....+|..|+++|++++| |.|++||++|...+.
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekp-y~C~~C~k~F~~~~~   45 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRP-YGCGVCGKKFKMKHH   45 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCS-EECTTTSCEESSSHH
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccccC-CcCCCcCCEecCHHH
Confidence            689999 599999999999999999999998 999999999998877

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=1.9e-13  Score=68.22  Aligned_cols=36  Identities=31%  Similarity=0.576  Sum_probs=27.6

Q ss_pred             CccccCCCCCcccccccccccccCHHHHHHHHHHhcC
Q psy7450           9 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECG   45 (161)
Q Consensus         9 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~   45 (161)
                      +|+.+ |++++||.|++||+.|...++|..|+++|+|
T Consensus         2 rH~~~-Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtG   37 (38)
T d2cota2           2 RSEWQ-QRERRRYKCDECGKSFSHSSDLSKHRRTHTG   37 (38)
T ss_dssp             CCCSC-CCCSCSSBCSSSCCBCSCHHHHHHHHTTTCC
T ss_pred             ccCcc-cCCCCCEecCCCCceeeCHHHHHHhCccCCC
Confidence            56777 7777777777777777777777777777776

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=4.1e-13  Score=66.94  Aligned_cols=35  Identities=17%  Similarity=0.324  Sum_probs=23.3

Q ss_pred             CCCeecCCcCCccCchHHHHHHHH-hhCCCCCccccC
Q psy7450          47 EPRYQCPHCPYRGKQKVHLKTHVA-IKHQGPEMLSVK   82 (161)
Q Consensus        47 ~k~~~C~~C~~~f~~~~~l~~H~r-~h~~~~~~~~C~   82 (161)
                      ++||.|.+||++|...++|.+|++ +|++++| |.|+
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekp-y~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERP-HKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCC-CCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcC-cCCc
Confidence            566777777777777777777754 5666666 6665

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=5.8e-14  Score=70.11  Aligned_cols=37  Identities=19%  Similarity=0.289  Sum_probs=34.8

Q ss_pred             HHHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCCC
Q psy7450          38 RHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQG   75 (161)
Q Consensus        38 ~H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~   75 (161)
                      +|+++|++ ++||.|++||++|.+.++|..|+++|+||
T Consensus         2 rH~~~Ht~-ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRE-RRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCC-SCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCC-CCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            46788999 99999999999999999999999999986

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=4.1e-13  Score=66.92  Aligned_cols=38  Identities=26%  Similarity=0.475  Sum_probs=34.6

Q ss_pred             CCCcccccccccccccCHHHHHHHHH-HhcCCCCCeecCC
Q psy7450          16 LLQFRYTCDSCGKVYKLKRSLYRHRT-LECGKEPRYQCPH   54 (161)
Q Consensus        16 ~~~k~~~C~~C~~~f~~~~~l~~H~~-~h~~~~k~~~C~~   54 (161)
                      +.++||.|++||+.|...++|.+|++ +|+| ++||.|++
T Consensus         1 s~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~-ekpy~C~i   39 (39)
T d2epsa1           1 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTS-ERPHKCQV   39 (39)
T ss_dssp             CSSCCEECSSSCCEESSHHHHHHHHHHTSCC-CCCCCSSS
T ss_pred             CCCCCccCCCCCCCcCChHHhhccCcCccCC-CcCcCCcC
Confidence            35799999999999999999999975 7999 99999974

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=5.9e-13  Score=63.84  Aligned_cols=31  Identities=26%  Similarity=0.516  Sum_probs=15.2

Q ss_pred             CCCCcccccccccccccCHHHHHHHHHHhcC
Q psy7450          15 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECG   45 (161)
Q Consensus        15 h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~   45 (161)
                      |+|++||.|.+||+.|...+.|..|+++|+|
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~Htg   32 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTG   32 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGC
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccccCC
Confidence            4444444444444444444444444444444

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=6.7e-13  Score=63.65  Aligned_cols=33  Identities=21%  Similarity=0.377  Sum_probs=31.4

Q ss_pred             HhcCCCCCeecCCcCCccCchHHHHHHHHhhCCC
Q psy7450          42 LECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQG   75 (161)
Q Consensus        42 ~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~~   75 (161)
                      +|+| ++||.|.+||++|.+.++|..|+++|+||
T Consensus         1 IHTg-ekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSG-EKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTT-CCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCC-CCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            4889 99999999999999999999999999986

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=2.3e-12  Score=63.27  Aligned_cols=32  Identities=34%  Similarity=0.556  Sum_probs=19.3

Q ss_pred             HhcCCCCCeecCCcCCccCchHHHHHHHHhhCC
Q psy7450          42 LECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQ   74 (161)
Q Consensus        42 ~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~   74 (161)
                      +|+| ++||.|.+||++|.+.++|..|+++|++
T Consensus         2 ~HTg-ekPy~C~~C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           2 THTG-EKPYACSHCDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             TCCC-CCCEECSSSSCEESSHHHHHHHHHHTTC
T ss_pred             CCCC-CCCEECCCCCCCcCCHhHHHHhCcccCC
Confidence            4556 6666666666666666666666666554

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.22  E-value=4.6e-12  Score=62.63  Aligned_cols=35  Identities=17%  Similarity=0.184  Sum_probs=22.1

Q ss_pred             ccccCCCCCcccccccccccccCHHHHHHHHHHhcC
Q psy7450          10 HTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECG   45 (161)
Q Consensus        10 H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~   45 (161)
                      |.++ |+|++||.|+.|++.|...++|..|+++|.+
T Consensus         2 h~R~-HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRG-STGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSST-TCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCc-cCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            4555 6666666666666666666666666666543

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.19  E-value=2.7e-12  Score=63.45  Aligned_cols=35  Identities=23%  Similarity=0.325  Sum_probs=32.4

Q ss_pred             HHHHhcCCCCCeecCCcCCccCchHHHHHHHHhhCC
Q psy7450          39 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQ   74 (161)
Q Consensus        39 H~~~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~   74 (161)
                      |.++|+| ++||.|.+|+++|.+.++|.+|+++|.+
T Consensus         2 h~R~HTg-eKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTG-IKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCC-SSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCC-ccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            4678999 9999999999999999999999999864

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.18  E-value=7.6e-12  Score=58.21  Aligned_cols=29  Identities=21%  Similarity=0.361  Sum_probs=20.3

Q ss_pred             CCeecCCcCCccCchHHHHHHHHhhCCCC
Q psy7450          48 PRYQCPHCPYRGKQKVHLKTHVAIKHQGP   76 (161)
Q Consensus        48 k~~~C~~C~~~f~~~~~l~~H~r~h~~~~   76 (161)
                      +||.|++|+++|.+.+.|.+|+++|+||+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            46777777777777777777777777664

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=7.6e-12  Score=61.39  Aligned_cols=33  Identities=21%  Similarity=0.268  Sum_probs=31.2

Q ss_pred             ccCCCCCcccccccccccccCHHHHHHHHHHhcC
Q psy7450          12 LFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECG   45 (161)
Q Consensus        12 ~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~   45 (161)
                      ++ |+|++||.|.+||+.|...+.|..|+++|++
T Consensus         1 R~-HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           1 RT-HTGEKPYACSHCDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             TT-CCCCCCEECSSSSCEESSHHHHHHHHHHTTC
T ss_pred             CC-CCCCCCEECCCCCCCcCCHhHHHHhCcccCC
Confidence            35 9999999999999999999999999999987

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=9.9e-12  Score=57.71  Aligned_cols=29  Identities=28%  Similarity=0.683  Sum_probs=21.4

Q ss_pred             CCeecCCcCCccCchHHHHHHHHhhCCCC
Q psy7450          48 PRYQCPHCPYRGKQKVHLKTHVAIKHQGP   76 (161)
Q Consensus        48 k~~~C~~C~~~f~~~~~l~~H~r~h~~~~   76 (161)
                      |||.|++||++|.+.++|.+|+++|+|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            46777777777777777777777777764

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.16  E-value=8.5e-12  Score=57.38  Aligned_cols=28  Identities=25%  Similarity=0.446  Sum_probs=18.7

Q ss_pred             CCCeecCCcCCccCchHHHHHHHHhhCC
Q psy7450          47 EPRYQCPHCPYRGKQKVHLKTHVAIKHQ   74 (161)
Q Consensus        47 ~k~~~C~~C~~~f~~~~~l~~H~r~h~~   74 (161)
                      |+||.|.+|+++|.+.++|.+|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            4666666666666666666666666654

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.15  E-value=1.3e-11  Score=59.88  Aligned_cols=30  Identities=17%  Similarity=0.377  Sum_probs=15.6

Q ss_pred             cCCCCCeecCCcCCccCchHHHHHHHHhhCC
Q psy7450          44 CGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQ   74 (161)
Q Consensus        44 ~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~~   74 (161)
                      +| ++||.|.+|++.|.+.++|.+|+++|+.
T Consensus         3 TG-ekPy~C~~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           3 SG-KRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             SC-CSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CC-CccccCCCCCCcccChHHHHHHccccCC
Confidence            44 5555555555555555555555555543

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.13  E-value=1.6e-11  Score=59.54  Aligned_cols=31  Identities=16%  Similarity=0.294  Sum_probs=30.0

Q ss_pred             CCCCcccccccccccccCHHHHHHHHHHhcC
Q psy7450          15 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECG   45 (161)
Q Consensus        15 h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~   45 (161)
                      |+|++||.|++|++.|...++|..|+++|++
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCC
Confidence            7999999999999999999999999999987

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=1.5e-11  Score=60.18  Aligned_cols=31  Identities=35%  Similarity=0.551  Sum_probs=15.9

Q ss_pred             HhcCCCCCeecCCcCCccCchHHHHHHHHhhC
Q psy7450          42 LECGKEPRYQCPHCPYRGKQKVHLKTHVAIKH   73 (161)
Q Consensus        42 ~h~~~~k~~~C~~C~~~f~~~~~l~~H~r~h~   73 (161)
                      +|+| ++||.|++|++.|.+.++|.+|++.++
T Consensus         2 ~HTg-ekP~~C~~C~k~F~~~~~L~~H~~~~H   32 (36)
T d2ct1a2           2 THSG-EKPYECYICHARFTQSGTMKMHILQKH   32 (36)
T ss_dssp             CCSC-CCSEECTTTCCEESCHHHHHHHHHHHS
T ss_pred             ccCC-CCCEeCCCCcccccchHHHHHHccccc
Confidence            3455 555555555555555555555544333

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.08  E-value=2.7e-11  Score=55.66  Aligned_cols=28  Identities=21%  Similarity=0.413  Sum_probs=26.9

Q ss_pred             CcccccccccccccCHHHHHHHHHHhcC
Q psy7450          18 QFRYTCDSCGKVYKLKRSLYRHRTLECG   45 (161)
Q Consensus        18 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~   45 (161)
                      |+||.|++|++.|...++|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6899999999999999999999999987

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.06  E-value=4.5e-11  Score=55.53  Aligned_cols=29  Identities=21%  Similarity=0.508  Sum_probs=27.5

Q ss_pred             cccccccccccccCHHHHHHHHHHhcCCCC
Q psy7450          19 FRYTCDSCGKVYKLKRSLYRHRTLECGKEP   48 (161)
Q Consensus        19 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k   48 (161)
                      +||.|++|++.|...+.|.+|+++|+| ++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTg-EK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTN-EK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTS-SC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccC-CC
Confidence            699999999999999999999999999 64

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=6.4e-11  Score=57.91  Aligned_cols=33  Identities=12%  Similarity=0.108  Sum_probs=29.5

Q ss_pred             ccCCCCCcccccccccccccCHHHHHHHHHHhcC
Q psy7450          12 LFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECG   45 (161)
Q Consensus        12 ~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~   45 (161)
                      ++ |+|++||.|+.|++.|...++|..|++.+++
T Consensus         1 R~-HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           1 RT-HSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CC-CSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             Cc-cCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            35 9999999999999999999999999876554

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=5.9e-11  Score=53.18  Aligned_cols=26  Identities=27%  Similarity=0.401  Sum_probs=17.4

Q ss_pred             CCeecCCcCCccCchHHHHHHHHhhC
Q psy7450          48 PRYQCPHCPYRGKQKVHLKTHVAIKH   73 (161)
Q Consensus        48 k~~~C~~C~~~f~~~~~l~~H~r~h~   73 (161)
                      |||+|.+||++|.+.+.|.+|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            46667777777777777777766663

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=7.1e-11  Score=54.73  Aligned_cols=29  Identities=17%  Similarity=0.398  Sum_probs=27.4

Q ss_pred             cccccccccccccCHHHHHHHHHHhcCCCC
Q psy7450          19 FRYTCDSCGKVYKLKRSLYRHRTLECGKEP   48 (161)
Q Consensus        19 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k   48 (161)
                      |||.|++|++.|...+.|.+|+++|+| ++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Htg-eK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQN-KK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGC-CC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCC-cC
Confidence            699999999999999999999999999 64

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=1.6e-10  Score=56.38  Aligned_cols=32  Identities=25%  Similarity=0.536  Sum_probs=20.4

Q ss_pred             eecCC--cCCccCchHHHHHHHHhhCCCCCccccC
Q psy7450          50 YQCPH--CPYRGKQKVHLKTHVAIKHQGPEMLSVK   82 (161)
Q Consensus        50 ~~C~~--C~~~f~~~~~l~~H~r~h~~~~~~~~C~   82 (161)
                      |.|+.  |+++|.+.+.|.+|+++|+|++| |.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekp-y~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRD-YICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCC-CSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCC-EeCC
Confidence            45554  66666666666666666666666 6664

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.97  E-value=1.4e-11  Score=64.01  Aligned_cols=32  Identities=16%  Similarity=0.483  Sum_probs=15.8

Q ss_pred             hcCCCCCeecCC--cCCccCchHHHHHHHHhhCCC
Q psy7450          43 ECGKEPRYQCPH--CPYRGKQKVHLKTHVAIKHQG   75 (161)
Q Consensus        43 h~~~~k~~~C~~--C~~~f~~~~~l~~H~r~h~~~   75 (161)
                      |+| ++||.|.+  |+++|...++|..|+++|+|+
T Consensus        13 h~g-ekpy~C~~~~C~k~F~~~~~L~~H~r~Htge   46 (47)
T d1ncsa_          13 EMP-DKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             EET-TTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             ccC-CCCeECCcCCCCccccCchHHHhhcccccCC
Confidence            444 45555543  555555555555555555444

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.96  E-value=6e-11  Score=61.52  Aligned_cols=41  Identities=12%  Similarity=0.191  Sum_probs=35.8

Q ss_pred             CCCCCccccCCCCCccccccc--ccccccCHHHHHHHHHHhcCCCC
Q psy7450           5 FNLPPHTLFNPLLQFRYTCDS--CGKVYKLKRSLYRHRTLECGKEP   48 (161)
Q Consensus         5 ~~l~~H~~~~h~~~k~~~C~~--C~~~f~~~~~l~~H~~~h~~~~k   48 (161)
                      ..|..|+ . |++++||.|.+  |++.|...++|..|+++|+| ++
T Consensus         5 ~~l~~h~-~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htg-ek   47 (47)
T d1ncsa_           5 GSIDKYV-K-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE-DR   47 (47)
T ss_dssp             SSGGGSC-E-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTT-TC
T ss_pred             chhcchh-h-ccCCCCeECCcCCCCccccCchHHHhhcccccC-CC
Confidence            3456666 5 89999999987  99999999999999999999 64

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=1.6e-10  Score=51.75  Aligned_cols=26  Identities=27%  Similarity=0.654  Sum_probs=24.8

Q ss_pred             cccccccccccccCHHHHHHHHHHhc
Q psy7450          19 FRYTCDSCGKVYKLKRSLYRHRTLEC   44 (161)
Q Consensus        19 k~~~C~~C~~~f~~~~~l~~H~~~h~   44 (161)
                      |||.|.+||+.|...+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            69999999999999999999999985

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.92  E-value=4.9e-10  Score=52.16  Aligned_cols=28  Identities=21%  Similarity=0.311  Sum_probs=18.9

Q ss_pred             CCeecCC--cCCccCchHHHHHHHHhhCCC
Q psy7450          48 PRYQCPH--CPYRGKQKVHLKTHVAIKHQG   75 (161)
Q Consensus        48 k~~~C~~--C~~~f~~~~~l~~H~r~h~~~   75 (161)
                      +||.|++  |+++|.+.++|.+|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            4666666  777777777777777776664

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=4.9e-10  Score=54.56  Aligned_cols=32  Identities=31%  Similarity=0.816  Sum_probs=30.0

Q ss_pred             ccccc--ccccccCHHHHHHHHHHhcCCCCCeecC
Q psy7450          21 YTCDS--CGKVYKLKRSLYRHRTLECGKEPRYQCP   53 (161)
Q Consensus        21 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~k~~~C~   53 (161)
                      |.|+.  |++.|...+.|.+|+++|+| ++||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htg-ekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSD-TRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHT-SCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCC-CCCEeCC
Confidence            67876  99999999999999999999 9999996

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=5.4e-10  Score=52.10  Aligned_cols=28  Identities=32%  Similarity=0.558  Sum_probs=18.1

Q ss_pred             CCeecCC--cCCccCchHHHHHHHHhhCCC
Q psy7450          48 PRYQCPH--CPYRGKQKVHLKTHVAIKHQG   75 (161)
Q Consensus        48 k~~~C~~--C~~~f~~~~~l~~H~r~h~~~   75 (161)
                      +||.|++  |+++|.+.++|.+|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            4666655  666666666666666666654

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=2.1e-09  Score=50.44  Aligned_cols=29  Identities=17%  Similarity=0.283  Sum_probs=18.9

Q ss_pred             CCeecC--CcCCccCchHHHHHHHHhhCCCC
Q psy7450          48 PRYQCP--HCPYRGKQKVHLKTHVAIKHQGP   76 (161)
Q Consensus        48 k~~~C~--~C~~~f~~~~~l~~H~r~h~~~~   76 (161)
                      +||.|+  .|+++|.+.++|.+|+++|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            466664  37777777777777777766654

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=2.6e-09  Score=49.65  Aligned_cols=27  Identities=26%  Similarity=0.368  Sum_probs=25.9

Q ss_pred             ccccccc--ccccccCHHHHHHHHHHhcC
Q psy7450          19 FRYTCDS--CGKVYKLKRSLYRHRTLECG   45 (161)
Q Consensus        19 k~~~C~~--C~~~f~~~~~l~~H~~~h~~   45 (161)
                      +||.|++  |++.|...++|.+|+++|+|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtG   29 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTG   29 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTT
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcC
Confidence            6899988  99999999999999999998

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.73  E-value=3.1e-09  Score=49.46  Aligned_cols=27  Identities=30%  Similarity=0.635  Sum_probs=25.7

Q ss_pred             ccccccc--ccccccCHHHHHHHHHHhcC
Q psy7450          19 FRYTCDS--CGKVYKLKRSLYRHRTLECG   45 (161)
Q Consensus        19 k~~~C~~--C~~~f~~~~~l~~H~~~h~~   45 (161)
                      +||.|++  |++.|...++|..|+++|+|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTG   29 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTG   29 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCC
Confidence            6999987  99999999999999999998

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.65  E-value=5.7e-09  Score=48.02  Aligned_cols=27  Identities=30%  Similarity=0.609  Sum_probs=17.4

Q ss_pred             CCeecCC--cCCccCchHHHHHHHHhhCC
Q psy7450          48 PRYQCPH--CPYRGKQKVHLKTHVAIKHQ   74 (161)
Q Consensus        48 k~~~C~~--C~~~f~~~~~l~~H~r~h~~   74 (161)
                      +||.|++  |+++|.+.++|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            4666655  66666666666666666654

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=9.5e-09  Score=48.14  Aligned_cols=29  Identities=31%  Similarity=0.644  Sum_probs=26.5

Q ss_pred             cccccc--cccccccCHHHHHHHHHHhcCCCC
Q psy7450          19 FRYTCD--SCGKVYKLKRSLYRHRTLECGKEP   48 (161)
Q Consensus        19 k~~~C~--~C~~~f~~~~~l~~H~~~h~~~~k   48 (161)
                      +||.|+  .|++.|...++|..|+++|+| ++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~Htg-eK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTG-EK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSC-CC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccc-cC
Confidence            689996  599999999999999999999 64

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.63  E-value=1.6e-08  Score=47.60  Aligned_cols=28  Identities=21%  Similarity=0.417  Sum_probs=19.3

Q ss_pred             CCCeecCC--cCCccCchHHHHHHHHhhCC
Q psy7450          47 EPRYQCPH--CPYRGKQKVHLKTHVAIKHQ   74 (161)
Q Consensus        47 ~k~~~C~~--C~~~f~~~~~l~~H~r~h~~   74 (161)
                      ++||.|..  |+++|.+.++|.+|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            46677766  77777777777777777654

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.53  E-value=1.7e-08  Score=45.87  Aligned_cols=26  Identities=31%  Similarity=0.627  Sum_probs=18.0

Q ss_pred             CCeecCC--cCCccCchHHHHHHHHhhC
Q psy7450          48 PRYQCPH--CPYRGKQKVHLKTHVAIKH   73 (161)
Q Consensus        48 k~~~C~~--C~~~f~~~~~l~~H~r~h~   73 (161)
                      +||.|+.  ||++|.+.++|.+|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            4667765  7777777777777777664

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.51  E-value=1.8e-08  Score=46.27  Aligned_cols=27  Identities=26%  Similarity=0.604  Sum_probs=25.3

Q ss_pred             ccccccc--ccccccCHHHHHHHHHHhcC
Q psy7450          19 FRYTCDS--CGKVYKLKRSLYRHRTLECG   45 (161)
Q Consensus        19 k~~~C~~--C~~~f~~~~~l~~H~~~h~~   45 (161)
                      +||.|++  |++.|...++|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            6899977  99999999999999999986

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.42  E-value=7e-08  Score=45.32  Aligned_cols=28  Identities=29%  Similarity=0.619  Sum_probs=26.2

Q ss_pred             Cccccccc--ccccccCHHHHHHHHHHhcC
Q psy7450          18 QFRYTCDS--CGKVYKLKRSLYRHRTLECG   45 (161)
Q Consensus        18 ~k~~~C~~--C~~~f~~~~~l~~H~~~h~~   45 (161)
                      ++||.|++  |++.|...++|.+|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            58999988  99999999999999999986

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=6.9e-08  Score=41.03  Aligned_cols=26  Identities=27%  Similarity=0.324  Sum_probs=16.8

Q ss_pred             CeecCCcCCccCchHHHHHHHHhhCC
Q psy7450          49 RYQCPHCPYRGKQKVHLKTHVAIKHQ   74 (161)
Q Consensus        49 ~~~C~~C~~~f~~~~~l~~H~r~h~~   74 (161)
                      |..|+.|++.|++++.|..|+|.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            34566666666666666666666654

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.39  E-value=1.4e-07  Score=41.43  Aligned_cols=27  Identities=22%  Similarity=0.359  Sum_probs=22.8

Q ss_pred             CCCeecCCcCCccCchHHHHHHHHhhC
Q psy7450          47 EPRYQCPHCPYRGKQKVHLKTHVAIKH   73 (161)
Q Consensus        47 ~k~~~C~~C~~~f~~~~~l~~H~r~h~   73 (161)
                      ++||.|.+||+.|.......+|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            578888888888888888888888874

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.34  E-value=6.4e-08  Score=43.92  Aligned_cols=26  Identities=23%  Similarity=0.419  Sum_probs=24.2

Q ss_pred             ccccccc--ccccccCHHHHHHHHHHhc
Q psy7450          19 FRYTCDS--CGKVYKLKRSLYRHRTLEC   44 (161)
Q Consensus        19 k~~~C~~--C~~~f~~~~~l~~H~~~h~   44 (161)
                      +||.|+.  |++.|...++|.+|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            6899987  9999999999999999985

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=2.4e-07  Score=39.33  Aligned_cols=26  Identities=31%  Similarity=0.620  Sum_probs=24.1

Q ss_pred             ccccccccccccCHHHHHHHHHHhcC
Q psy7450          20 RYTCDSCGKVYKLKRSLYRHRTLECG   45 (161)
Q Consensus        20 ~~~C~~C~~~f~~~~~l~~H~~~h~~   45 (161)
                      |..|++|++.|+.+..|..|++.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            56899999999999999999999986

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.20  E-value=6.2e-07  Score=39.89  Aligned_cols=28  Identities=36%  Similarity=0.598  Sum_probs=16.8

Q ss_pred             CCCeecCCcCCccCchHHHHHHHHhhCC
Q psy7450          47 EPRYQCPHCPYRGKQKVHLKTHVAIKHQ   74 (161)
Q Consensus        47 ~k~~~C~~C~~~f~~~~~l~~H~r~h~~   74 (161)
                      ++||.|++|...|..++-+..|.|.|.|
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCCcccchHHHHhhccccceEeeecccC
Confidence            3556666666666666666666666554

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=5.5e-07  Score=40.97  Aligned_cols=30  Identities=17%  Similarity=0.211  Sum_probs=18.2

Q ss_pred             CCeecCCcCCccCchHHHHHHHHhhCCCCC
Q psy7450          48 PRYQCPHCPYRGKQKVHLKTHVAIKHQGPE   77 (161)
Q Consensus        48 k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~   77 (161)
                      +...|..||+.|.....|.+|.-.|.+++|
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekp   33 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKP   33 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCC
Confidence            344566666666666666666666666665

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.09  E-value=1.1e-06  Score=38.51  Aligned_cols=27  Identities=22%  Similarity=0.583  Sum_probs=24.9

Q ss_pred             CcccccccccccccCHHHHHHHHHHhc
Q psy7450          18 QFRYTCDSCGKVYKLKRSLYRHRTLEC   44 (161)
Q Consensus        18 ~k~~~C~~C~~~f~~~~~l~~H~~~h~   44 (161)
                      ++||.|+.||+.|.......+|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            589999999999999999999998874

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=1.6e-06  Score=38.49  Aligned_cols=28  Identities=29%  Similarity=0.524  Sum_probs=26.5

Q ss_pred             CcccccccccccccCHHHHHHHHHHhcC
Q psy7450          18 QFRYTCDSCGKVYKLKRSLYRHRTLECG   45 (161)
Q Consensus        18 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~   45 (161)
                      ++||.|++|+..|..+..+..|.++|.|
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCCcccchHHHHhhccccceEeeecccC
Confidence            5899999999999999999999999987

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.05  E-value=1.7e-06  Score=37.37  Aligned_cols=25  Identities=20%  Similarity=0.307  Sum_probs=14.6

Q ss_pred             eecCCcCCccCchHHHHHHHHhhCC
Q psy7450          50 YQCPHCPYRGKQKVHLKTHVAIKHQ   74 (161)
Q Consensus        50 ~~C~~C~~~f~~~~~l~~H~r~h~~   74 (161)
                      ..|..||++|...+.|++|+-+|+|
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccC
Confidence            3455566666666666666555554

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.04  E-value=1.1e-06  Score=39.98  Aligned_cols=32  Identities=31%  Similarity=0.671  Sum_probs=29.0

Q ss_pred             cccccccccccccCHHHHHHHHHHhcCCCCCee
Q psy7450          19 FRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQ   51 (161)
Q Consensus        19 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~k~~~   51 (161)
                      +...|+.||+.|.....|.+|..+|++ ++||.
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~-ekpys   35 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSG-EKPYS   35 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCS-CCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCC-CCCCC
Confidence            456799999999999999999999999 99983

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.02  E-value=2.4e-06  Score=37.08  Aligned_cols=28  Identities=25%  Similarity=0.675  Sum_probs=19.8

Q ss_pred             CCCeecCCcCCccCchHHHHHHHHhhCC
Q psy7450          47 EPRYQCPHCPYRGKQKVHLKTHVAIKHQ   74 (161)
Q Consensus        47 ~k~~~C~~C~~~f~~~~~l~~H~r~h~~   74 (161)
                      ++||.|..|...-.+.+.|..|.|.|+|
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CCcceeeecccccCCchheEEeeecccC
Confidence            4577777777777777777777777765

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.94  E-value=5.3e-06  Score=36.18  Aligned_cols=26  Identities=31%  Similarity=0.598  Sum_probs=17.4

Q ss_pred             eecCCcCCccCchHHHHHHHHhhCCC
Q psy7450          50 YQCPHCPYRGKQKVHLKTHVAIKHQG   75 (161)
Q Consensus        50 ~~C~~C~~~f~~~~~l~~H~r~h~~~   75 (161)
                      |.|+.||.....++.|+.|+|+|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            56666666666666666666666654

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.92  E-value=5.2e-06  Score=36.80  Aligned_cols=27  Identities=30%  Similarity=0.516  Sum_probs=19.5

Q ss_pred             CCeecCC--cCCccCchHHHHHHHHhhCC
Q psy7450          48 PRYQCPH--CPYRGKQKVHLKTHVAIKHQ   74 (161)
Q Consensus        48 k~~~C~~--C~~~f~~~~~l~~H~r~h~~   74 (161)
                      +||.|..  |++++..+++|+.|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            4677765  77777777777777776654

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=3.6e-06  Score=36.34  Aligned_cols=25  Identities=32%  Similarity=0.698  Sum_probs=23.5

Q ss_pred             cccccccccccCHHHHHHHHHHhcC
Q psy7450          21 YTCDSCGKVYKLKRSLYRHRTLECG   45 (161)
Q Consensus        21 ~~C~~C~~~f~~~~~l~~H~~~h~~   45 (161)
                      ..|.+||+.|...+.|++|+.+|+|
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccC
Confidence            5699999999999999999999998

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.79  E-value=5.9e-06  Score=35.83  Aligned_cols=28  Identities=18%  Similarity=0.326  Sum_probs=26.3

Q ss_pred             CcccccccccccccCHHHHHHHHHHhcC
Q psy7450          18 QFRYTCDSCGKVYKLKRSLYRHRTLECG   45 (161)
Q Consensus        18 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~   45 (161)
                      ++||+|..|...-...+.|..|.+.|+|
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CCcceeeecccccCCchheEEeeecccC
Confidence            5799999999999999999999999988

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.76  E-value=1.6e-05  Score=33.76  Aligned_cols=26  Identities=27%  Similarity=0.392  Sum_probs=16.7

Q ss_pred             ecCCcCCccCchHHHHHHHHhhCCCC
Q psy7450          51 QCPHCPYRGKQKVHLKTHVAIKHQGP   76 (161)
Q Consensus        51 ~C~~C~~~f~~~~~l~~H~r~h~~~~   76 (161)
                      +|+.|.+.|.++..|+.|-|.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            46666666666666666666666653

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.73  E-value=1.3e-05  Score=38.42  Aligned_cols=27  Identities=26%  Similarity=0.434  Sum_probs=22.8

Q ss_pred             cCCCCCeecCCcCCccCchHHHHHHHHh
Q psy7450          44 CGKEPRYQCPHCPYRGKQKVHLKTHVAI   71 (161)
Q Consensus        44 ~~~~k~~~C~~C~~~f~~~~~l~~H~r~   71 (161)
                      +| .+||.|..|++.|.+.+++.+|.-.
T Consensus         1 TG-iKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           1 TG-IKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CC-CCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CC-CCceeccchhhhhhhHHHHHHhhhh
Confidence            46 7899999999999999999888643

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=1.7e-05  Score=34.50  Aligned_cols=27  Identities=26%  Similarity=0.492  Sum_probs=25.0

Q ss_pred             ccccccccccccCHHHHHHHHHHhcCCC
Q psy7450          20 RYTCDSCGKVYKLKRSLYRHRTLECGKE   47 (161)
Q Consensus        20 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~   47 (161)
                      .|.|+.||.....++-|+.|+++|++ +
T Consensus         1 kYvC~~Cg~~C~KPSvL~KHIRsHT~-~   27 (28)
T d1bboa1           1 KYICEECGIRAKKPSMLKKHIRTHTD-V   27 (28)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSS-C
T ss_pred             CccccccCcccCCHHHHHHHHHHhcC-C
Confidence            37899999999999999999999998 5

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.64  E-value=3.8e-05  Score=33.56  Aligned_cols=27  Identities=41%  Similarity=0.839  Sum_probs=18.4

Q ss_pred             CCeecCCcCCccCchHHHHHHHHhhCC
Q psy7450          48 PRYQCPHCPYRGKQKVHLKTHVAIKHQ   74 (161)
Q Consensus        48 k~~~C~~C~~~f~~~~~l~~H~r~h~~   74 (161)
                      +||+|..|.......++|..|+++-++
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccccccccccccchhhhhhhhcccc
Confidence            467777777777777777777766554

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.54  E-value=5.6e-05  Score=32.39  Aligned_cols=26  Identities=27%  Similarity=0.677  Sum_probs=20.0

Q ss_pred             CCeecCCcCCccCchHHHHHHHHhhC
Q psy7450          48 PRYQCPHCPYRGKQKVHLKTHVAIKH   73 (161)
Q Consensus        48 k~~~C~~C~~~f~~~~~l~~H~r~h~   73 (161)
                      +||.|..|...-...++|..|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            67788888877777788888877764

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.49  E-value=3.4e-05  Score=34.12  Aligned_cols=27  Identities=33%  Similarity=0.513  Sum_probs=23.9

Q ss_pred             ccccccc--ccccccCHHHHHHHHHHhcC
Q psy7450          19 FRYTCDS--CGKVYKLKRSLYRHRTLECG   45 (161)
Q Consensus        19 k~~~C~~--C~~~f~~~~~l~~H~~~h~~   45 (161)
                      +||.|..  |++.+..++.|..|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            6899977  99999999999999997654

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.49  E-value=5.9e-05  Score=31.94  Aligned_cols=26  Identities=31%  Similarity=0.483  Sum_probs=24.0

Q ss_pred             ccccccccccCHHHHHHHHHHhcCCCC
Q psy7450          22 TCDSCGKVYKLKRSLYRHRTLECGKEP   48 (161)
Q Consensus        22 ~C~~C~~~f~~~~~l~~H~~~h~~~~k   48 (161)
                      +|+.|.+.|.++..|..|-+.|+| ++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htg-ek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTG-EK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSS-CC
T ss_pred             cCcchHHHHHHhHhhhhccccccC-CC
Confidence            699999999999999999999999 64

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.44  E-value=6.1e-05  Score=32.68  Aligned_cols=27  Identities=22%  Similarity=0.509  Sum_probs=16.9

Q ss_pred             cccccccccccccCHHHHHHHHHHhcC
Q psy7450          19 FRYTCDSCGKVYKLKRSLYRHRTLECG   45 (161)
Q Consensus        19 k~~~C~~C~~~f~~~~~l~~H~~~h~~   45 (161)
                      ..|.|..|...|.....|..|+.+|+|
T Consensus         3 qvftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             ceEEeHHHHHHHHHHHhheeeeecccC
Confidence            345666666666666666666666665

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.44  E-value=5.3e-05  Score=31.59  Aligned_cols=23  Identities=26%  Similarity=0.494  Sum_probs=14.3

Q ss_pred             eecCCcCCccCchHHHHHHHHhh
Q psy7450          50 YQCPHCPYRGKQKVHLKTHVAIK   72 (161)
Q Consensus        50 ~~C~~C~~~f~~~~~l~~H~r~h   72 (161)
                      |.|..|.++|..++.|.+|+++|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            35666666666666666666655

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=6.3e-05  Score=35.97  Aligned_cols=27  Identities=30%  Similarity=0.464  Sum_probs=23.9

Q ss_pred             CCCcccccccccccccCHHHHHHHHHH
Q psy7450          16 LLQFRYTCDSCGKVYKLKRSLYRHRTL   42 (161)
Q Consensus        16 ~~~k~~~C~~C~~~f~~~~~l~~H~~~   42 (161)
                      +|-+||.|..|++.|.....+.+|...
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhh
Confidence            477999999999999999999998653

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.37  E-value=8.2e-05  Score=32.23  Aligned_cols=24  Identities=38%  Similarity=0.747  Sum_probs=15.4

Q ss_pred             CeecCC--cCCccCchHHHHHHHHhh
Q psy7450          49 RYQCPH--CPYRGKQKVHLKTHVAIK   72 (161)
Q Consensus        49 ~~~C~~--C~~~f~~~~~l~~H~r~h   72 (161)
                      ||.|+.  |++.|..++-|++|.++|
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhcc
Confidence            566654  666676666666666655

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.35  E-value=0.0001  Score=32.20  Aligned_cols=27  Identities=19%  Similarity=0.237  Sum_probs=24.4

Q ss_pred             cccccccccccccCHHHHHHHHHHhcC
Q psy7450          19 FRYTCDSCGKVYKLKRSLYRHRTLECG   45 (161)
Q Consensus        19 k~~~C~~C~~~f~~~~~l~~H~~~h~~   45 (161)
                      +||.|..|.......++|..|+++.++
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccccccccccccchhhhhhhhcccc
Confidence            689999999999999999999987655

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.22  E-value=0.00011  Score=30.63  Aligned_cols=24  Identities=29%  Similarity=0.667  Sum_probs=22.0

Q ss_pred             cccccccccccCHHHHHHHHHHhc
Q psy7450          21 YTCDSCGKVYKLKRSLYRHRTLEC   44 (161)
Q Consensus        21 ~~C~~C~~~f~~~~~l~~H~~~h~   44 (161)
                      |.|..|.++|..++.|.+|+++|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            689999999999999999999874

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.22  E-value=7.5e-05  Score=33.28  Aligned_cols=26  Identities=19%  Similarity=0.351  Sum_probs=17.9

Q ss_pred             CCeecCC--cCCccCchHHHHHHH-HhhC
Q psy7450          48 PRYQCPH--CPYRGKQKVHLKTHV-AIKH   73 (161)
Q Consensus        48 k~~~C~~--C~~~f~~~~~l~~H~-r~h~   73 (161)
                      +||.|..  |.+.|++.+....|+ |+|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            4677765  777777777777776 6654

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.16  E-value=0.00017  Score=31.23  Aligned_cols=25  Identities=32%  Similarity=0.743  Sum_probs=22.3

Q ss_pred             ccccccc--ccccccCHHHHHHHHHHh
Q psy7450          19 FRYTCDS--CGKVYKLKRSLYRHRTLE   43 (161)
Q Consensus        19 k~~~C~~--C~~~f~~~~~l~~H~~~h   43 (161)
                      .||.|+.  |++.|..++.|.+|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4889965  999999999999999887

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.06  E-value=0.00029  Score=30.63  Aligned_cols=27  Identities=26%  Similarity=0.560  Sum_probs=17.2

Q ss_pred             CCeecCCcCCccCchHHHHHHHHhhCC
Q psy7450          48 PRYQCPHCPYRGKQKVHLKTHVAIKHQ   74 (161)
Q Consensus        48 k~~~C~~C~~~f~~~~~l~~H~r~h~~   74 (161)
                      +||.|..|..-..+.++|..|++..++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            366676666666666777766665443

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.06  E-value=0.00021  Score=30.58  Aligned_cols=26  Identities=23%  Similarity=0.443  Sum_probs=24.2

Q ss_pred             cccccccccccccCHHHHHHHHHHhc
Q psy7450          19 FRYTCDSCGKVYKLKRSLYRHRTLEC   44 (161)
Q Consensus        19 k~~~C~~C~~~f~~~~~l~~H~~~h~   44 (161)
                      +||.|..|...-...+.|..|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            79999999999999999999999875

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.05  E-value=0.00045  Score=29.85  Aligned_cols=29  Identities=17%  Similarity=0.441  Sum_probs=26.5

Q ss_pred             CCCeecCCcCCccCchHHHHHHHHhhCCC
Q psy7450          47 EPRYQCPHCPYRGKQKVHLKTHVAIKHQG   75 (161)
Q Consensus        47 ~k~~~C~~C~~~f~~~~~l~~H~r~h~~~   75 (161)
                      +..|.|..|...|...-.|+.|+-.|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            45799999999999999999999999885

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.05  E-value=0.00036  Score=30.23  Aligned_cols=22  Identities=32%  Similarity=0.659  Sum_probs=11.7

Q ss_pred             CeecCCcCCccCchHHHHHHHH
Q psy7450          49 RYQCPHCPYRGKQKVHLKTHVA   70 (161)
Q Consensus        49 ~~~C~~C~~~f~~~~~l~~H~r   70 (161)
                      ||.|..|..+|..+.+|..|++
T Consensus         1 py~C~~CnF~FKTKGNLTKHmk   22 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMK   22 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHH
T ss_pred             CcccceeeeeEeeccchhHhhh
Confidence            4455555555555555555554

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.94  E-value=0.00038  Score=30.95  Aligned_cols=25  Identities=24%  Similarity=0.356  Sum_probs=16.2

Q ss_pred             CeecCCcCCccCchHHHHHHHHhhC
Q psy7450          49 RYQCPHCPYRGKQKVHLKTHVAIKH   73 (161)
Q Consensus        49 ~~~C~~C~~~f~~~~~l~~H~r~h~   73 (161)
                      ||.|.+|++.|...+-|.+|++.-+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH   25 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIH   25 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTS
T ss_pred             CcccccccchhhHHHHHHHHHHHHh
Confidence            5667777777777766666665443

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.92  E-value=0.00048  Score=32.55  Aligned_cols=28  Identities=18%  Similarity=0.453  Sum_probs=15.5

Q ss_pred             CCeecCCcCCccCchHHHHHHHHhhCCC
Q psy7450          48 PRYQCPHCPYRGKQKVHLKTHVAIKHQG   75 (161)
Q Consensus        48 k~~~C~~C~~~f~~~~~l~~H~r~h~~~   75 (161)
                      +.|.|..|++.|.+..+|=-|++.|..+
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCS
T ss_pred             CccCCCCCCCccCCcccccchHhhhcch
Confidence            3455555555555555555555555433

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.92  E-value=0.00025  Score=30.79  Aligned_cols=26  Identities=27%  Similarity=0.577  Sum_probs=13.8

Q ss_pred             cccccc--ccccccCHHHHHHHHHHhcC
Q psy7450          20 RYTCDS--CGKVYKLKRSLYRHRTLECG   45 (161)
Q Consensus        20 ~~~C~~--C~~~f~~~~~l~~H~~~h~~   45 (161)
                      ||.|..  |.+.|.+...|.+|..+|+|
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CcCcccccccccchhhhhhhhhhccccC
Confidence            444532  55555555555555555554

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.86  E-value=0.00033  Score=30.34  Aligned_cols=25  Identities=28%  Similarity=0.570  Sum_probs=22.7

Q ss_pred             ccccccccccccCHHHHHHHHHHhc
Q psy7450          20 RYTCDSCGKVYKLKRSLYRHRTLEC   44 (161)
Q Consensus        20 ~~~C~~C~~~f~~~~~l~~H~~~h~   44 (161)
                      ||.|..|.-.|..+.+|..|+.+-+
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSKa   25 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSKA   25 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSSS
T ss_pred             CcccceeeeeEeeccchhHhhhhhh
Confidence            7899999999999999999998644

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.85  E-value=0.00042  Score=32.77  Aligned_cols=28  Identities=21%  Similarity=0.451  Sum_probs=25.4

Q ss_pred             CcccccccccccccCHHHHHHHHHHhcC
Q psy7450          18 QFRYTCDSCGKVYKLKRSLYRHRTLECG   45 (161)
Q Consensus        18 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~   45 (161)
                      .+.|.|.+|++.|.+...|--|++.|..
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~   30 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRR   30 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCC
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcc
Confidence            4679999999999999999999999865

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.84  E-value=0.00049  Score=29.86  Aligned_cols=28  Identities=18%  Similarity=0.301  Sum_probs=24.4

Q ss_pred             CCeecCC--cCCccCchHHHHHHHHhhCCC
Q psy7450          48 PRYQCPH--CPYRGKQKVHLKTHVAIKHQG   75 (161)
Q Consensus        48 k~~~C~~--C~~~f~~~~~l~~H~r~h~~~   75 (161)
                      +||.|..  |.+.|.....|.+|.-+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            5788865  999999999999999999875

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.45  E-value=0.0015  Score=30.58  Aligned_cols=27  Identities=26%  Similarity=0.509  Sum_probs=20.6

Q ss_pred             CCCeec--CCcCCccCchHHHHHHHHhhC
Q psy7450          47 EPRYQC--PHCPYRGKQKVHLKTHVAIKH   73 (161)
Q Consensus        47 ~k~~~C--~~C~~~f~~~~~l~~H~r~h~   73 (161)
                      ++||.|  +-|+.+|.+...|..|...|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            678888  448888888888888877664

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.38  E-value=0.0014  Score=28.40  Aligned_cols=27  Identities=22%  Similarity=0.333  Sum_probs=23.5

Q ss_pred             cccccccccccccCHHHHHHHHHHhcC
Q psy7450          19 FRYTCDSCGKVYKLKRSLYRHRTLECG   45 (161)
Q Consensus        19 k~~~C~~C~~~f~~~~~l~~H~~~h~~   45 (161)
                      +||.|+.|.-.....++|..|++.-+|
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            589999999999999999999876544

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.32  E-value=0.0017  Score=26.83  Aligned_cols=22  Identities=32%  Similarity=0.661  Sum_probs=17.2

Q ss_pred             CeecCCcCCccCchHHHHHHHH
Q psy7450          49 RYQCPHCPYRGKQKVHLKTHVA   70 (161)
Q Consensus        49 ~~~C~~C~~~f~~~~~l~~H~r   70 (161)
                      ||.|..|...|.++..|+.|+-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            6778888888888888887764

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.28  E-value=0.00048  Score=30.58  Aligned_cols=27  Identities=19%  Similarity=0.488  Sum_probs=23.1

Q ss_pred             ccccccc--ccccccCHHHHHHHH-HHhcC
Q psy7450          19 FRYTCDS--CGKVYKLKRSLYRHR-TLECG   45 (161)
Q Consensus        19 k~~~C~~--C~~~f~~~~~l~~H~-~~h~~   45 (161)
                      +||.|+.  |.+.|+..+.-..|+ ++|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            6899987  999999999999997 77754

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.23  E-value=0.0013  Score=29.21  Aligned_cols=26  Identities=27%  Similarity=0.741  Sum_probs=22.4

Q ss_pred             ccccccccccccCHHHHHHHHH-HhcC
Q psy7450          20 RYTCDSCGKVYKLKRSLYRHRT-LECG   45 (161)
Q Consensus        20 ~~~C~~C~~~f~~~~~l~~H~~-~h~~   45 (161)
                      ||.|.+|++.|....-|.+|+. .|.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            7999999999999999999975 4554

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.11  E-value=0.0017  Score=26.86  Aligned_cols=22  Identities=32%  Similarity=0.718  Sum_probs=20.4

Q ss_pred             ccccccccccccCHHHHHHHHH
Q psy7450          20 RYTCDSCGKVYKLKRSLYRHRT   41 (161)
Q Consensus        20 ~~~C~~C~~~f~~~~~l~~H~~   41 (161)
                      ||.|..|...|..+..|+.|+.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            8999999999999999999974

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.11  E-value=0.003  Score=26.92  Aligned_cols=25  Identities=28%  Similarity=0.579  Sum_probs=20.1

Q ss_pred             CeecCCcCCccCchHHHHHHHHhhC
Q psy7450          49 RYQCPHCPYRGKQKVHLKTHVAIKH   73 (161)
Q Consensus        49 ~~~C~~C~~~f~~~~~l~~H~r~h~   73 (161)
                      |-.|+.|..+.+++..|+.|.|+|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            4578888888888888888888774

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.08  E-value=0.0027  Score=29.73  Aligned_cols=29  Identities=17%  Similarity=0.342  Sum_probs=24.9

Q ss_pred             CCCccccc--ccccccccCHHHHHHHHHHhc
Q psy7450          16 LLQFRYTC--DSCGKVYKLKRSLYRHRTLEC   44 (161)
Q Consensus        16 ~~~k~~~C--~~C~~~f~~~~~l~~H~~~h~   44 (161)
                      +.++||.|  +-|+..|.+...|..|...|.
T Consensus         2 ~ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           2 SDDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TTCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCCceecCCCCccccccchHHHHHhhhhhe
Confidence            35799999  559999999999999988774

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.69  E-value=0.005  Score=26.03  Aligned_cols=21  Identities=29%  Similarity=0.537  Sum_probs=13.8

Q ss_pred             CeecCCcCCccCchHHHHHHH
Q psy7450          49 RYQCPHCPYRGKQKVHLKTHV   69 (161)
Q Consensus        49 ~~~C~~C~~~f~~~~~l~~H~   69 (161)
                      ||+|..||+.+-.+.+|..|.
T Consensus         1 pf~c~kcgkcyfrkenllehe   21 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHE   21 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHH
Confidence            566666777666666666664

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.61  E-value=0.0052  Score=25.99  Aligned_cols=22  Identities=36%  Similarity=0.825  Sum_probs=19.8

Q ss_pred             ccccccccccccCHHHHHHHHH
Q psy7450          20 RYTCDSCGKVYKLKRSLYRHRT   41 (161)
Q Consensus        20 ~~~C~~C~~~f~~~~~l~~H~~   41 (161)
                      ||.|..||+.+-.+.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            7899999999999999988864

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.42  E-value=0.0099  Score=25.17  Aligned_cols=24  Identities=33%  Similarity=0.736  Sum_probs=17.7

Q ss_pred             eecCCcCCccCchHHHHHHHHhhC
Q psy7450          50 YQCPHCPYRGKQKVHLKTHVAIKH   73 (161)
Q Consensus        50 ~~C~~C~~~f~~~~~l~~H~r~h~   73 (161)
                      |+|+.|+....+++.|..|++..+
T Consensus         3 ~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHTS
T ss_pred             ccCCcchhheeehhhhhHHhhhcc
Confidence            677788777777888877776543

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.10  E-value=0.0064  Score=27.73  Aligned_cols=17  Identities=18%  Similarity=0.045  Sum_probs=8.7

Q ss_pred             ccCchHHHHHHHHhhCC
Q psy7450          58 RGKQKVHLKTHVAIKHQ   74 (161)
Q Consensus        58 ~f~~~~~l~~H~r~h~~   74 (161)
                      .|.....|..|+|+|+|
T Consensus        16 pf~a~YkLv~H~R~HTg   32 (33)
T d2glia2          16 PFKAQYMLVVHMRRHTG   32 (33)
T ss_dssp             CCSSHHHHHHHTHHHHC
T ss_pred             cchhHHHHHHHHhhcCC
Confidence            34455555555555554

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.93  E-value=0.0099  Score=29.19  Aligned_cols=24  Identities=29%  Similarity=0.588  Sum_probs=16.6

Q ss_pred             ccccccccccccCHHHHHHHHHHh
Q psy7450          20 RYTCDSCGKVYKLKRSLYRHRTLE   43 (161)
Q Consensus        20 ~~~C~~C~~~f~~~~~l~~H~~~h   43 (161)
                      -|.|..|++.|+....|..|...|
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             eeeccccccccCCHHHHhHhHHhc
Confidence            356777777777777777776654

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.66  E-value=0.011  Score=26.61  Aligned_cols=26  Identities=27%  Similarity=0.733  Sum_probs=18.1

Q ss_pred             ccccccccccccCHHHHHHHHHHhcC
Q psy7450          20 RYTCDSCGKVYKLKRSLYRHRTLECG   45 (161)
Q Consensus        20 ~~~C~~C~~~f~~~~~l~~H~~~h~~   45 (161)
                      .|.|..||++|.....+.+|...-+|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            46777777777777777777665544

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.43  E-value=0.021  Score=25.72  Aligned_cols=26  Identities=12%  Similarity=0.262  Sum_probs=23.1

Q ss_pred             CeecCCcCCccCchHHHHHHHHhhCC
Q psy7450          49 RYQCPHCPYRGKQKVHLKTHVAIKHQ   74 (161)
Q Consensus        49 ~~~C~~C~~~f~~~~~l~~H~r~h~~   74 (161)
                      .|.|..||+.|.+...+.+|.....|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            58999999999999999999887665

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.30  E-value=0.014  Score=26.57  Aligned_cols=22  Identities=18%  Similarity=0.131  Sum_probs=18.5

Q ss_pred             ccccccccCHHHHHHHHHHhcC
Q psy7450          24 DSCGKVYKLKRSLYRHRTLECG   45 (161)
Q Consensus        24 ~~C~~~f~~~~~l~~H~~~h~~   45 (161)
                      +--++.|.....|..|+++|+|
T Consensus        11 ~R~~~pf~a~YkLv~H~R~HTg   32 (33)
T d2glia2          11 SRELRPFKAQYMLVVHMRRHTG   32 (33)
T ss_dssp             TTTTCCCSSHHHHHHHTHHHHC
T ss_pred             CCCCCcchhHHHHHHHHhhcCC
Confidence            3344679999999999999998

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.27  E-value=0.017  Score=24.52  Aligned_cols=25  Identities=24%  Similarity=0.526  Sum_probs=22.2

Q ss_pred             ccccccccccccCHHHHHHHHHHhc
Q psy7450          20 RYTCDSCGKVYKLKRSLYRHRTLEC   44 (161)
Q Consensus        20 ~~~C~~C~~~f~~~~~l~~H~~~h~   44 (161)
                      |-+|+.|..+.+++..|..|.++|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            4579999999999999999999874

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.92  E-value=0.024  Score=27.78  Aligned_cols=26  Identities=19%  Similarity=0.180  Sum_probs=22.8

Q ss_pred             CCeecCCcCCccCchHHHHHHHHhhC
Q psy7450          48 PRYQCPHCPYRGKQKVHLKTHVAIKH   73 (161)
Q Consensus        48 k~~~C~~C~~~f~~~~~l~~H~r~h~   73 (161)
                      ..|.|-.|++.|.....|++|...|.
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            45789999999999999999987765

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.68  E-value=0.039  Score=22.69  Aligned_cols=22  Identities=36%  Similarity=0.712  Sum_probs=13.2

Q ss_pred             eecCCcCCccCchHHHHHHHHh
Q psy7450          50 YQCPHCPYRGKQKVHLKTHVAI   71 (161)
Q Consensus        50 ~~C~~C~~~f~~~~~l~~H~r~   71 (161)
                      |.|+.|-+.|.+++++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            4566666666666666666554

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=92.79  E-value=0.053  Score=23.60  Aligned_cols=27  Identities=33%  Similarity=0.693  Sum_probs=17.9

Q ss_pred             cccccc--cccccccCHHHHHHHHHHhcC
Q psy7450          19 FRYTCD--SCGKVYKLKRSLYRHRTLECG   45 (161)
Q Consensus        19 k~~~C~--~C~~~f~~~~~l~~H~~~h~~   45 (161)
                      +.|.|+  .|+..|.....|..|...|+|
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTG   30 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTG   30 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcC
Confidence            345553  477777777777777777776

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.58  E-value=0.09  Score=25.56  Aligned_cols=30  Identities=27%  Similarity=0.498  Sum_probs=21.2

Q ss_pred             CCCeecCCcCCccCchHHHHHHHHhhCCCC
Q psy7450          47 EPRYQCPHCPYRGKQKVHLKTHVAIKHQGP   76 (161)
Q Consensus        47 ~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~   76 (161)
                      +.|-.|+.|+....+..+|++|....+=.+
T Consensus        22 ~qpatcpic~avirqsrnlrrhlel~hf~k   51 (54)
T d1yuja_          22 EQPATCPICYAVIRQSRNLRRHLELRHFAK   51 (54)
T ss_dssp             SCCEECTTTCCEESSHHHHHHHHHHHTSCS
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHHHhhcc
Confidence            567777778777777777777776655333

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=92.29  E-value=0.044  Score=24.37  Aligned_cols=22  Identities=27%  Similarity=0.477  Sum_probs=16.8

Q ss_pred             CeecCCcCCccCchHHHHHHHH
Q psy7450          49 RYQCPHCPYRGKQKVHLKTHVA   70 (161)
Q Consensus        49 ~~~C~~C~~~f~~~~~l~~H~r   70 (161)
                      .|.|.-||-.|+..+.|..|+.
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            4778888888888888877754

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.86  E-value=0.0072  Score=25.93  Aligned_cols=22  Identities=18%  Similarity=0.185  Sum_probs=17.9

Q ss_pred             CcCcCCCcchhhcccccccccc
Q psy7450         130 SIKHQGPESAFDLRRNNQAHLN  151 (161)
Q Consensus       130 ~~~~~~~~~~f~~~~~l~~H~~  151 (161)
                      .+...|||+.|..|-.|..|.+
T Consensus         2 ~cdf~gc~kifsnrqylnhh~k   23 (30)
T d2dlka1           2 PCDFPGCGRIFSNRQYLNHHKK   23 (30)
T ss_dssp             ECSSTTTCCEESSHHHHHHHHH
T ss_pred             CCCCCCchhhhccHHHHHhHHH
Confidence            4566788999999999988764

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.82  E-value=0.13  Score=21.92  Aligned_cols=21  Identities=29%  Similarity=0.630  Sum_probs=11.2

Q ss_pred             cccccccccccCHHHHHHHHH
Q psy7450          21 YTCDSCGKVYKLKRSLYRHRT   41 (161)
Q Consensus        21 ~~C~~C~~~f~~~~~l~~H~~   41 (161)
                      |.|..||+...+...++.|..
T Consensus         3 ftc~hcgkqlks~~gmkyhvm   23 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVM   23 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEEe
Confidence            455555555555555555543

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.95  E-value=0.21  Score=21.23  Aligned_cols=26  Identities=27%  Similarity=0.561  Sum_probs=21.2

Q ss_pred             CeecCCcCCccCchHHHHHHHHhhCC
Q psy7450          49 RYQCPHCPYRGKQKVHLKTHVAIKHQ   74 (161)
Q Consensus        49 ~~~C~~C~~~f~~~~~l~~H~r~h~~   74 (161)
                      .|.|..||+...+...++.|.-..+.
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             ceechhHHHHHhhccCceEEEeeccc
Confidence            47899999999999999988765543

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=89.39  E-value=0.18  Score=20.98  Aligned_cols=18  Identities=28%  Similarity=0.270  Sum_probs=9.4

Q ss_pred             cCCccCchHHHHHHHHhh
Q psy7450          55 CPYRGKQKVHLKTHVAIK   72 (161)
Q Consensus        55 C~~~f~~~~~l~~H~r~h   72 (161)
                      |++.|.....|+.|+-+|
T Consensus         9 c~kafkkhnqlkvhqf~h   26 (28)
T d2j7ja1           9 CGKAFKKHNQLKVHQFSH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHHHH
T ss_pred             chHHHhhccceEEEeecc
Confidence            555555555555555444

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.05  E-value=0.14  Score=21.66  Aligned_cols=19  Identities=11%  Similarity=0.289  Sum_probs=14.8

Q ss_pred             cCCccCchHHHHHHHHhhC
Q psy7450          55 CPYRGKQKVHLKTHVAIKH   73 (161)
Q Consensus        55 C~~~f~~~~~l~~H~r~h~   73 (161)
                      |++.|...+.++.|+.+|.
T Consensus         9 C~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             CCCEESSHHHHHHHHGGGS
T ss_pred             HHHHhhchHHHHHHhhccC
Confidence            7788888888888877663

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.52  E-value=0.023  Score=30.49  Aligned_cols=26  Identities=15%  Similarity=-0.001  Sum_probs=23.0

Q ss_pred             cCcccCCCcccCcCcCCCcchhhccccccccccC
Q psy7450         119 LSIKHQGPEMLSIKHQGPESAFDLRRNNQAHLNG  152 (161)
Q Consensus       119 ~~~~~~c~~c~~~~~~~~~~~f~~~~~l~~H~~~  152 (161)
                      +...|.|..|        ++.|.+...|..|.++
T Consensus        12 G~gqfYCv~C--------~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          12 GGGLHRCLAC--------ARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGGCSEETTT--------TEECSSHHHHHHHTTC
T ss_pred             CCCEEecccc--------cCccCCHHHHHHHHcc
Confidence            3456899999        9999999999999987

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=87.89  E-value=0.16  Score=23.67  Aligned_cols=26  Identities=23%  Similarity=0.407  Sum_probs=16.4

Q ss_pred             CCCeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCC
Q psy7450          47 EPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGP   86 (161)
Q Consensus        47 ~k~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k   86 (161)
                      ++-|.|.+||..             +.++. |-.|++||.
T Consensus         3 ~~~~~C~vCG~i-------------~~g~~-P~~CPvCg~   28 (37)
T d1nnqa2           3 KKVYICPICGYT-------------AVDEA-PEYCPVCGA   28 (37)
T ss_dssp             SCEEECTTTCCE-------------EESCC-CSBCTTTCC
T ss_pred             CcEEECCCCCCE-------------ecCCC-CCcCCCCCC
Confidence            345778888764             33443 377888874

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=87.36  E-value=0.22  Score=22.31  Aligned_cols=23  Identities=30%  Similarity=0.743  Sum_probs=13.0

Q ss_pred             cccccccccccccCHHHHHHHHH
Q psy7450          19 FRYTCDSCGKVYKLKRSLYRHRT   41 (161)
Q Consensus        19 k~~~C~~C~~~f~~~~~l~~H~~   41 (161)
                      -.|.|..|.+.+...+++-+|-.
T Consensus         7 ~~yRC~~C~r~YTHISNFCRHyv   29 (37)
T d2drpa1           7 HTYRCKVCSRVYTHISNFCRHYV   29 (37)
T ss_dssp             TEEECTTTCCEESSHHHHHHHHH
T ss_pred             cEEEeehhhHHHHHHHHHHHHHH
Confidence            34556666666666666555543

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=86.42  E-value=0.2  Score=23.13  Aligned_cols=11  Identities=36%  Similarity=0.745  Sum_probs=6.3

Q ss_pred             CCeecCCcCCc
Q psy7450          48 PRYQCPHCPYR   58 (161)
Q Consensus        48 k~~~C~~C~~~   58 (161)
                      +-|.|.+||..
T Consensus         4 ~~~vC~vCGyi   14 (36)
T d1yuza2           4 KFHLCPICGYI   14 (36)
T ss_dssp             CEEECSSSCCE
T ss_pred             CEEECCCCCCE
Confidence            44566666654

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.73  E-value=0.11  Score=27.68  Aligned_cols=23  Identities=17%  Similarity=0.241  Sum_probs=15.7

Q ss_pred             cccccccccccccCHHHHHHHHH
Q psy7450          19 FRYTCDSCGKVYKLKRSLYRHRT   41 (161)
Q Consensus        19 k~~~C~~C~~~f~~~~~l~~H~~   41 (161)
                      ..|-|..|++.|.+...|..|.+
T Consensus        14 gqfYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          14 GLHRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             GCSEETTTTEECSSHHHHHHHTT
T ss_pred             CEEecccccCccCCHHHHHHHHc
Confidence            34667777777777777776654

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=85.07  E-value=0.53  Score=22.74  Aligned_cols=28  Identities=32%  Similarity=0.426  Sum_probs=23.8

Q ss_pred             CCcccccccccccccCHHHHHHHHHHhc
Q psy7450          17 LQFRYTCDSCGKVYKLKRSLYRHRTLEC   44 (161)
Q Consensus        17 ~~k~~~C~~C~~~f~~~~~l~~H~~~h~   44 (161)
                      .+.|-.|+.|+.......+|.+|....+
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~h   48 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            4568899999999999999999987543

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.14  E-value=0.46  Score=24.73  Aligned_cols=18  Identities=17%  Similarity=0.401  Sum_probs=9.9

Q ss_pred             CCeecCCcCCccCchHHH
Q psy7450          48 PRYQCPHCPYRGKQKVHL   65 (161)
Q Consensus        48 k~~~C~~C~~~f~~~~~l   65 (161)
                      ..|.|+.|++.|.....+
T Consensus        13 ~~y~Cp~C~~~ys~Lda~   30 (62)
T d1vd4a_          13 ASFKCPVCSSTFTDLEAN   30 (62)
T ss_dssp             SEEECSSSCCEEEHHHHH
T ss_pred             CceECCCCCCCcchhhHH
Confidence            346666666665554443

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.68  E-value=0.13  Score=26.94  Aligned_cols=37  Identities=19%  Similarity=0.219  Sum_probs=29.3

Q ss_pred             cCCCCCcCcccCCCcccCcCcCCCcchhhccccccccccChhhhh
Q psy7450         113 HQGPETLSIKHQGPEMLSIKHQGPESAFDLRRNNQAHLNGRKDMM  157 (161)
Q Consensus       113 ~~~~~~~~~~~~c~~c~~~~~~~~~~~f~~~~~l~~H~~~~~~~~  157 (161)
                      ..++......|+|..|        +.-|.....|..|+..+.+..
T Consensus         9 ~~~~~~~s~~yQC~HC--------d~K~~s~~el~~hl~~hneef   45 (75)
T d1x6fa1           9 GNGPRLQNSTYQCKHC--------DSKLQSTAELTSHLNIHNEEF   45 (75)
T ss_dssp             CCCSCCCCSCEECSSS--------CCEESSHHHHHHHHHHHHHHH
T ss_pred             CCCcccCCceeeechh--------HHHHhhHHHHHHHHHhccHHH
Confidence            3444456678999999        999999999999998776543

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.37  E-value=0.57  Score=24.35  Aligned_cols=27  Identities=30%  Similarity=0.712  Sum_probs=23.0

Q ss_pred             CCeecCCcCCccCchHHHHHHHHhhCC
Q psy7450          48 PRYQCPHCPYRGKQKVHLKTHVAIKHQ   74 (161)
Q Consensus        48 k~~~C~~C~~~f~~~~~l~~H~r~h~~   74 (161)
                      ..|+|..|+..|.....|..|...|..
T Consensus        17 ~~yQC~HCd~K~~s~~el~~hl~~hne   43 (75)
T d1x6fa1          17 STYQCKHCDSKLQSTAELTSHLNIHNE   43 (75)
T ss_dssp             SCEECSSSCCEESSHHHHHHHHHHHHH
T ss_pred             ceeeechhHHHHhhHHHHHHHHHhccH
Confidence            468999999999999999999888763

>d1lkoa2 g.41.5.1 (A:148-191) Rubrerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=80.71  E-value=0.18  Score=24.45  Aligned_cols=25  Identities=12%  Similarity=0.287  Sum_probs=16.7

Q ss_pred             CeecCCcCCccCchHHHHHHHHhhCCCCCccccCCCCC
Q psy7450          49 RYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGP   86 (161)
Q Consensus        49 ~~~C~~C~~~f~~~~~l~~H~r~h~~~~~~~~C~~C~k   86 (161)
                      .|.|..||..             |.|..+|-.|+.|+.
T Consensus         8 ~W~C~~CGyi-------------~~g~~aP~~CPvC~~   32 (44)
T d1lkoa2           8 KWRCRNCGYV-------------HEGTGAPELCPACAH   32 (44)
T ss_dssp             EEEETTTCCE-------------EEEEECCSBCTTTCC
T ss_pred             EEEcCCCCcE-------------EECCCCCCcCCCCCC
Confidence            4778888865             334444578888874