Psyllid ID: psy7538
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 543 | 2.2.26 [Sep-21-2011] | |||||||
| A1ZAI5 | 625 | Putative fatty acyl-CoA r | no | N/A | 0.869 | 0.755 | 0.389 | 5e-95 | |
| Q960W6 | 516 | Putative fatty acyl-CoA r | no | N/A | 0.869 | 0.914 | 0.357 | 6e-87 | |
| Q922J9 | 515 | Fatty acyl-CoA reductase | yes | N/A | 0.906 | 0.955 | 0.328 | 2e-80 | |
| Q8WVX9 | 515 | Fatty acyl-CoA reductase | yes | N/A | 0.906 | 0.955 | 0.324 | 4e-79 | |
| Q66H50 | 515 | Fatty acyl-CoA reductase | yes | N/A | 0.909 | 0.959 | 0.335 | 1e-78 | |
| Q5R834 | 515 | Fatty acyl-CoA reductase | yes | N/A | 0.906 | 0.955 | 0.322 | 1e-78 | |
| Q7ZXF5 | 515 | Fatty acyl-CoA reductase | N/A | N/A | 0.906 | 0.955 | 0.322 | 6e-78 | |
| Q5ZM72 | 515 | Fatty acyl-CoA reductase | no | N/A | 0.907 | 0.957 | 0.314 | 7e-76 | |
| Q0P5J1 | 515 | Fatty acyl-CoA reductase | no | N/A | 0.848 | 0.895 | 0.320 | 4e-74 | |
| Q7TNT2 | 515 | Fatty acyl-CoA reductase | no | N/A | 0.845 | 0.891 | 0.321 | 2e-72 |
| >sp|A1ZAI5|FACR1_DROME Putative fatty acyl-CoA reductase CG5065 OS=Drosophila melanogaster GN=CG5065 PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 348 bits (894), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 191/490 (38%), Positives = 288/490 (58%), Gaps = 18/490 (3%)
Query: 24 IAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESP 83
IA+ Y +S+F++GG+GF+GKVL+EK+LR P ++ IYLL+R K+G+ + R+ EL +P
Sbjct: 119 IAQFYAGRSVFITGGTGFMGKVLVEKLLRSCPEIRNIYLLIRPKRGQEVSARLTELLNAP 178
Query: 84 VFDALKTLRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIK 143
+F++L+ + K L K+ ISGDIT +LGISE D+ L NV +V+H AAT++FDE +K
Sbjct: 179 LFESLRQEKPKE-LSKVIPISGDITSEELGISEKDQNLLCRNVSVVFHSAATVKFDEKLK 237
Query: 144 TAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAE 203
+V +N GT+ ++EL +M +L ++STAYC+ + E Y PP +P +I
Sbjct: 238 LSVTINMLGTKRLVELCHRMLSLDALIHVSTAYCNCDRTDVSEVIYAPPYNPDDIISLIN 297
Query: 204 SMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELG-MPCMILRPSIVVPIYKEPL 262
+ E+ L+ ++G+ PN+Y +TK LAE ++ + E G +P I+RPSIV EP
Sbjct: 298 WLPEDILDQLTPRLIGKRPNTYTFTKALAEHMLLK--EAGNLPVAIVRPSIVTASLNEPF 355
Query: 263 PGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322
GW DN NGPTGL+ KG+ R+M C+ +AD +P D+ IN + W +++S
Sbjct: 356 AGWVDNFNGPTGLVSALAKGMFRTMMCEKNYVADMVPVDIVINLMIAAAWR-TATRKSNN 414
Query: 323 KSVCNLTSNKDYKITWQEICDIGKDIVTS--KIPFNSTLWYPGGTMTQSRLTHFICCLLF 380
+ N + + I W E K +TS K P LWYP G + +R + + C+
Sbjct: 415 LLIYNCCTGQRNPIIWSEFV---KHAMTSVRKHPLEGCLWYPTGDLRMNRPMNTLNCIAK 471
Query: 381 HWIPAYFLDAVILISGNKPCLVRIQERIHRGFDVFEYYANNEWEFKNGN----LHQTRPK 436
H++PAY LD V I G KP +V +Q +I + + EY+A +W FK+ N LH PK
Sbjct: 472 HFLPAYILDGVARIMGKKPFVVNVQNKIAKAVECLEYFATRQWRFKDDNVHALLHTLSPK 531
Query: 437 RNAREIVQYCVENDNVDIVKYFEKAVYGARYFLMKESPESLESARKKMKVMYALHITARC 496
REI + V + N D KY E+ V G R FL K+ PESL ++RK+M +Y LH +
Sbjct: 532 D--REIFVFDVRHINWD--KYVERYVLGFREFLFKQRPESLPASRKRMLRLYYLHQLTKL 587
Query: 497 IFLALFLWFL 506
+ + L FL
Sbjct: 588 VAVLLTWRFL 597
|
Catalyzes the reduction of saturated fatty acyl-CoA to fatty alcohols. Drosophila melanogaster (taxid: 7227) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: nEC: 2 |
| >sp|Q960W6|FACR3_DROME Putative fatty acyl-CoA reductase CG8306 OS=Drosophila melanogaster GN=CG8306 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 322 bits (824), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 172/481 (35%), Positives = 278/481 (57%), Gaps = 9/481 (1%)
Query: 24 IAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESP 83
I Y +++F++G +GF+G ++EK+LR PNV +YLLMR KKGK+ +R+EEL ++
Sbjct: 6 ITDFYAGRNVFITGATGFVGVTIVEKLLRDVPNVGTLYLLMRAKKGKSVQERLEELKKNS 65
Query: 84 VFDALKTLRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIK 143
VFD K L+ +S L KI I GD+ LGIS D++ LIDNV++V+H AAT+ F + +K
Sbjct: 66 VFDKFKELQLQSRLSKIVPIEGDVGLEHLGISPKDRQTLIDNVNVVFHSAATLDFFQSLK 125
Query: 144 TAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAE 203
+N RGTR ++EL +Q+KNL ++S+AY + +EE+ Y P+DP ++I +E
Sbjct: 126 ETTNINLRGTRRVVELCQQIKNLDALVHVSSAYVNAYLTKVEEKLYPAPEDPEKIIQLSE 185
Query: 204 SMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLP 263
++ ++ L+ +L + PN+Y +TK LAE VA PC I+RPS++ +KEP+P
Sbjct: 186 TLNDDALKELEPKLLKDHPNTYTFTKHLAEHEVANVAS-KFPCGIVRPSMITAAWKEPIP 244
Query: 264 GWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERK 323
GWT + NGP G +GA KGV+R + + + D++P DV +NG+ + T ++NS +++
Sbjct: 245 GWTISKNGPQGFFMGASKGVLRRLPLDPSIIMDYIPIDVVVNGI-ITTGYYVNSLQAKNG 303
Query: 324 ------SVCNLTSNKDYKITWQEICDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFICC 377
+ +LTS+ YK E+ + P NS +WYP + +S +
Sbjct: 304 GRPADLQIFHLTSST-YKPFRFELMTDKINSYLHDYPLNSAVWYPNLRLVKSLWVFRLSA 362
Query: 378 LLFHWIPAYFLDAVILISGNKPCLVRIQERIHRGFDVFEYYANNEWEFKNGNLHQTRPKR 437
+LFH+IPA LD V I G +P LVR+ + + + E + EW F + L
Sbjct: 363 ILFHFIPAIILDLVTKIGGGRPILVRLHKNVWNSLNTLEKFIFTEWHFDSKRLLALSKTL 422
Query: 438 NAREIVQYCVENDNVDIVKYFEKAVYGARYFLMKESPESLESARKKMKVMYALHITARCI 497
N + ++ ++ + +YF + G R +L KE ++LE AR+K K++ LH+ +
Sbjct: 423 NIVDKKKFFIDIGELAWDEYFSNTILGVRQYLSKEPIKNLEKARRKDKILLGLHVALQLS 482
Query: 498 F 498
F
Sbjct: 483 F 483
|
Catalyzes the reduction of saturated fatty acyl-CoA to fatty alcohols. Drosophila melanogaster (taxid: 7227) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q922J9|FACR1_MOUSE Fatty acyl-CoA reductase 1 OS=Mus musculus GN=Far1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 300 bits (767), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 167/509 (32%), Positives = 274/509 (53%), Gaps = 17/509 (3%)
Query: 24 IAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESP 83
I + YE K+I L+G +GFLGKVL+EK+LR P V +Y+L+R K G+TP +RVEE+ S
Sbjct: 4 IPEYYEGKNILLTGATGFLGKVLLEKLLRSCPRVNSVYVLVRQKAGQTPQERVEEILSSK 63
Query: 84 VFDALKTLRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIK 143
+FD L+ +KI I+ ++TQ KL +SE DK+ +ID+ ++++H AAT+RF+E ++
Sbjct: 64 LFDRLRD-ENPDFREKIIAINSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNENLR 122
Query: 144 TAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAE 203
AV LN TR ++ L++QMKNL+ F ++STAY + + K ++E Y PP DP ++I E
Sbjct: 123 DAVQLNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDSLE 182
Query: 204 SMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVA-ECMELGMPCMILRPSIVVPIYKEPL 262
M + + ++G+ PN+Y YTK LAE +V E +L + I+RPSIV +KEP
Sbjct: 183 WMDDGLVNDITPKLIGDRPNTYIYTKALAEYVVQQEGAKLNVA--IVRPSIVGASWKEPF 240
Query: 263 PGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322
PGW DN NGP+GL I AGKG++R+M N +AD +P DV +N W +
Sbjct: 241 PGWIDNFNGPSGLFIAAGKGILRTMRASNNALADLVPVDVVVNTSLAAAW-YSGVNRPRN 299
Query: 323 KSVCNLTSNKDYKITWQEICDIGKDIVTS--KIPFNSTLWYPGGTMTQSRLTHFICCLLF 380
V N T+ W E+ ++++ + P P +T + L + +
Sbjct: 300 IMVYNCTTGSTNPFHWGEV---EYHVISTFKRNPLEQAFRRPNVNLTSNHLLYHYWIAVS 356
Query: 381 HWIPAYFLDAVILISGNKPCLVRIQERIHRGFDVFEYYANNEWEFKNGNLHQTRPKRNAR 440
H PA+ D + ++G P +++ R+H+ EY+ +N W + N++ + N
Sbjct: 357 HKAPAFLYDIYLRMTGRSPRMMKTITRLHKAMVFLEYFTSNSWVWNTDNVNMLMNQLNPE 416
Query: 441 EIVQYCVENDNVDIVKYFEKAVYGARYFLMKESPESLESARKKMKVMYALHITARCIFLA 500
+ + ++ + +Y E G + +++ E L +ARK + + + I L
Sbjct: 417 DKKTFNIDVRQLHWAEYIENYCMGTKKYVLNEEMSGLPAARKHLNKLRNIRYGFNTI-LV 475
Query: 501 LFLWFLSNNFHVFLKLGLFVRGLASLVFS 529
+ +W +F+ R + V S
Sbjct: 476 ILIW------RIFIARSQMARNIWYFVVS 498
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q8WVX9|FACR1_HUMAN Fatty acyl-CoA reductase 1 OS=Homo sapiens GN=FAR1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 295 bits (756), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 165/509 (32%), Positives = 273/509 (53%), Gaps = 17/509 (3%)
Query: 24 IAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESP 83
I + YE K++ L+G +GFLGKVL+EK+LR P V +Y+L+R K G+TP +RVEE+
Sbjct: 4 IPEYYEGKNVLLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVLSGK 63
Query: 84 VFDALKTLRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIK 143
+FD L+ +KI I+ ++TQ KL +SE DK+ +ID+ +I++H AAT+RF+E ++
Sbjct: 64 LFDRLRD-ENPDFREKIIAINSELTQPKLALSEEDKEVIIDSTNIIFHCAATVRFNENLR 122
Query: 144 TAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAE 203
AV LN TR ++ L++QMKNL+ F ++STAY + + K ++E Y PP DP ++I E
Sbjct: 123 DAVQLNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDSLE 182
Query: 204 SMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVA-ECMELGMPCMILRPSIVVPIYKEPL 262
M + + ++G+ PN+Y YTK LAE +V E +L + I+RPSIV +KEP
Sbjct: 183 WMDDGLVNDITPKLIGDRPNTYIYTKALAEYVVQQEGAKLNVA--IVRPSIVGASWKEPF 240
Query: 263 PGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322
PGW DN NGP+GL I AGKG++R++ N +AD +P DV +N W +
Sbjct: 241 PGWIDNFNGPSGLFIAAGKGILRTIRASNNALADLVPVDVVVNMSLAAAW-YSGVNRPRN 299
Query: 323 KSVCNLTSNKDYKITWQEICDIGKDIVTS--KIPFNSTLWYPGGTMTQSRLTHFICCLLF 380
V N T+ W E+ ++++ + P P +T + L + +
Sbjct: 300 IMVYNCTTGSTNPFHWGEV---EYHVISTFKRNPLEQAFRRPNVNLTSNHLLYHYWIAVS 356
Query: 381 HWIPAYFLDAVILISGNKPCLVRIQERIHRGFDVFEYYANNEWEFKNGNLHQTRPKRNAR 440
H PA+ D + ++G P +++ R+H+ EY+ +N W + N++ + N
Sbjct: 357 HKAPAFLYDIYLRMTGRSPRMMKTITRLHKAMVFLEYFTSNSWVWNTENVNMLMNQLNPE 416
Query: 441 EIVQYCVENDNVDIVKYFEKAVYGARYFLMKESPESLESARKKMKVMYALHITARCIFLA 500
+ + ++ + +Y E G + +++ E L +ARK + + + I L
Sbjct: 417 DKKTFNIDVRQLHWAEYIENYCLGTKKYVLNEEMSGLPAARKHLNKLRNIRYGFNTI-LV 475
Query: 501 LFLWFLSNNFHVFLKLGLFVRGLASLVFS 529
+ +W +F+ R + V S
Sbjct: 476 ILIW------RIFIARSQMARNIWYFVVS 498
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q66H50|FACR1_RAT Fatty acyl-CoA reductase 1 OS=Rattus norvegicus GN=Far1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 294 bits (753), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 170/507 (33%), Positives = 271/507 (53%), Gaps = 13/507 (2%)
Query: 24 IAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESP 83
I + YE K+I L+G +GFLGKVL+EK+LR P V +Y+L+R K G+TP +RVEE+
Sbjct: 4 IPEYYEGKNILLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEILSGK 63
Query: 84 VFDALKTLRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIK 143
+FD L+ QKI I+ ++TQ KL +SE DK+ +ID+ ++++H AAT+RF+E ++
Sbjct: 64 LFDRLRD-ENPDFRQKIIAINSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNENLR 122
Query: 144 TAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAE 203
AV LN TR ++ L++QMKNL+ F ++STAY + + K ++E Y PP DP ++I E
Sbjct: 123 DAVQLNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDSLE 182
Query: 204 SMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVA-ECMELGMPCMILRPSIVVPIYKEPL 262
M + + ++G+ PN+Y YTK LAE +V E +L + I+RPSIV +KEP
Sbjct: 183 WMDDGLVNDITPKLIGDRPNTYIYTKALAEYVVQQEGAKLNVA--IVRPSIVGASWKEPF 240
Query: 263 PGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322
PGW DN NGP+GL I AGKG++R+M N +AD +P DV +N W +
Sbjct: 241 PGWIDNFNGPSGLFIAAGKGILRTMRASNNALADLVPVDVVVNTSLAAAW-YSGVNRPRN 299
Query: 323 KSVCNLTSNKDYKITWQEICDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFICCLLFHW 382
V N T+ W E+ D + P N +P + L + H
Sbjct: 300 IMVYNCTTGSTNPFHWGEVGDYLNHSFKTN-PLNQVFRHPYVKFYSNNLMLHYWKGVKHT 358
Query: 383 IPAYFLDAVILISGNKPCLVRIQERIHRGFDVFEYYANNEWEFKNGNLHQTRPKRNAREI 442
+PA LD + ++G KP +++ R+H+ EY+ +N W + N++ + N +
Sbjct: 359 VPALLLDLALRLTGQKPWMMKTITRLHKAMVFLEYFTSNSWVWNTDNVNMLMNQLNPEDK 418
Query: 443 VQYCVENDNVDIVKYFEKAVYGARYFLMKESPESLESARKKMKVMYALHITARCIFLALF 502
+ ++ + +Y E G + +++ E L +ARK + + + I L +
Sbjct: 419 KTFNIDVRQLHWAEYIENYCMGTKKYVLNEEMSGLPAARKHLNKLRNIRYGFNTI-LVIL 477
Query: 503 LWFLSNNFHVFLKLGLFVRGLASLVFS 529
+W +F+ R + V S
Sbjct: 478 IW------RIFIARSQMARNIWYFVVS 498
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q5R834|FACR1_PONAB Fatty acyl-CoA reductase 1 OS=Pongo abelii GN=FAR1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 294 bits (753), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 164/509 (32%), Positives = 273/509 (53%), Gaps = 17/509 (3%)
Query: 24 IAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESP 83
I + YE K++ L+G +GFLGKVL+EK+LR P V +Y+L+R K G+TP +RVEE+
Sbjct: 4 IPEYYEGKNVLLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVLSGK 63
Query: 84 VFDALKTLRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIK 143
+FD L+ +KI I+ ++TQ KL +SE DK+ +I++ +I++H AAT+RF+E ++
Sbjct: 64 LFDRLRD-ENPDFREKIIAINSELTQPKLALSEEDKEVIIESTNIIFHCAATVRFNENLR 122
Query: 144 TAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAE 203
AV LN TR ++ L++QMKNL+ F ++STAY + + K ++E Y PP DP ++I E
Sbjct: 123 DAVQLNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDSLE 182
Query: 204 SMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVA-ECMELGMPCMILRPSIVVPIYKEPL 262
M + + ++G+ PN+Y YTK LAE +V E +L + I+RPSIV +KEP
Sbjct: 183 WMDDGLVNDITPKLIGDRPNTYIYTKALAEYVVQQEGAKLNVA--IVRPSIVGASWKEPF 240
Query: 263 PGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322
PGW DN NGP+GL I AGKG++R++ N +AD +P DV +N W +
Sbjct: 241 PGWIDNFNGPSGLFIAAGKGILRTIRASNNALADLVPVDVVVNMSLAAAW-YSGVNRPRN 299
Query: 323 KSVCNLTSNKDYKITWQEICDIGKDIVTS--KIPFNSTLWYPGGTMTQSRLTHFICCLLF 380
V N T+ W E+ ++++ + P P +T + L + +
Sbjct: 300 IMVYNCTTGSTNPFHWGEV---EYHVISTFKRNPLEQAFRRPNVNLTSNHLLYHYWIAVS 356
Query: 381 HWIPAYFLDAVILISGNKPCLVRIQERIHRGFDVFEYYANNEWEFKNGNLHQTRPKRNAR 440
H PA+ D + ++G P +++ R+H+ EY+ +N W + N++ + N
Sbjct: 357 HKAPAFLYDIYLRMTGRSPRMMKTITRLHKAMVFLEYFTSNSWVWNTDNVNMLMNQLNPE 416
Query: 441 EIVQYCVENDNVDIVKYFEKAVYGARYFLMKESPESLESARKKMKVMYALHITARCIFLA 500
+ + ++ + +Y E G + +++ E L +ARK + + + I L
Sbjct: 417 DKKTFNIDVRQLHWAEYIENYCLGTKKYVLNEEMSGLPAARKHLNKLRNIRYGFNTI-LV 475
Query: 501 LFLWFLSNNFHVFLKLGLFVRGLASLVFS 529
+ +W +F+ R + V S
Sbjct: 476 ILIW------RIFIARSQMARNIWYFVVS 498
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Pongo abelii (taxid: 9601) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q7ZXF5|FACR1_XENLA Fatty acyl-CoA reductase 1 OS=Xenopus laevis GN=far1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 291 bits (746), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 164/509 (32%), Positives = 269/509 (52%), Gaps = 17/509 (3%)
Query: 24 IAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESP 83
I + Y+ K++ ++G +GF+GKVL+EK+LR PN K +Y+L+R K G+ P +RV E+
Sbjct: 4 IPEFYQGKNVLITGATGFMGKVLLEKLLRSCPNTKAVYVLVRHKAGQKPRERVAEMMSCK 63
Query: 84 VFDALKTLRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIK 143
+FD L+ QK+ IS ++TQ +L +S+ D+ LID +DIV+H AAT+RF+E ++
Sbjct: 64 LFDKLRD-EQPDCAQKVIAISSELTQPELDMSKEDQDTLIDCIDIVFHCAATVRFNESLR 122
Query: 144 TAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAE 203
A+ LN TR +L L+++MK L+ F ++STAY + + K +EE Y PP DP ++I E
Sbjct: 123 DAMQLNVIATRQLLYLAQKMKKLEVFIHVSTAYANCNRKQIEEVVYPPPVDPKKLIESLE 182
Query: 204 SMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLV-AECMELGMPCMILRPSIVVPIYKEPL 262
M + + ++G+ PN+Y YTK LAE +V E +L + I+RPSIV +KEP
Sbjct: 183 WMDDSLVNDITPKLIGDRPNTYTYTKALAEYVVQQEGSKLNIA--IVRPSIVGASWKEPF 240
Query: 263 PGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322
PGW DN NGP+GL I AGKG++R+M N +AD +P DV +N W + +
Sbjct: 241 PGWIDNFNGPSGLFIAAGKGILRTMRASNNAVADLIPVDVVVNTTLAAAW-YSGVNRPKN 299
Query: 323 KSVCNLTSNKDYKITWQEICDIGKDIVTS--KIPFNSTLWYPGGTMTQSRLTHFICCLLF 380
V N T+ W E + ++++ + P P +T + L + +
Sbjct: 300 MLVYNCTTGGTNPFHWGE---VEYHVISTFKRNPLEQAFRRPNVNLTSNHLLYHYWIAVS 356
Query: 381 HWIPAYFLDAVILISGNKPCLVRIQERIHRGFDVFEYYANNEWEFKNGNLHQTRPKRNAR 440
H PA D + I+G P +++ R+HR + EY+ +N W + N N + + +
Sbjct: 357 HKAPALLYDVYLRITGRSPRMMKTITRLHRAMMLLEYFTSNSWVWNNENTNMLMSQLSPE 416
Query: 441 EIVQYCVENDNVDIVKYFEKAVYGARYFLMKESPESLESARKKMKVMYALHITARCIFLA 500
+ + + + +Y E G + +++ E L +ARK + + + I +
Sbjct: 417 DKKVFNFDVRQLHWAEYMENYCMGTKKYVLNEEMSGLPAARKHLNKLRNIRYGFNTILVV 476
Query: 501 LFLWFLSNNFHVFLKLGLFVRGLASLVFS 529
L + VF+ R + V S
Sbjct: 477 LI-------WRVFIARSQMARNIWYFVVS 498
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Xenopus laevis (taxid: 8355) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q5ZM72|FACR1_CHICK Fatty acyl-CoA reductase 1 OS=Gallus gallus GN=FAR1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 285 bits (729), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 160/508 (31%), Positives = 268/508 (52%), Gaps = 15/508 (2%)
Query: 24 IAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESP 83
I + YE K++ L+G +GF+GKVL+EK+LR P VK +Y+L+R K G+TP R+EE+
Sbjct: 4 IPEYYEGKNVLLTGATGFMGKVLLEKLLRSCPKVKAVYVLVRPKAGQTPEARIEEITSCK 63
Query: 84 VFDALKTLRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIK 143
+FD L+ +KI VI+ ++TQ +L +S K++LI+ ++I++H AAT+RF+E ++
Sbjct: 64 LFDRLRE-EQPDFKEKIIVITSELTQPELDLSNPVKEKLIECINIIFHCAATVRFNETLR 122
Query: 144 TAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAE 203
AV LN T+ +L L++QM NL+ F ++STAY + + K +EE Y PP DP +++ E
Sbjct: 123 DAVQLNVLSTKQLLSLAQQMTNLEVFMHVSTAYAYCNRKHIEEVVYPPPVDPKKLMDSLE 182
Query: 204 SMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLP 263
M + + ++G+ PN+Y YTK LAE +V + + I+RPSIV +KEP P
Sbjct: 183 WMDDSLVNDITPKLIGDRPNTYTYTKALAEYVVQQ-EGARLNTAIIRPSIVGASWKEPFP 241
Query: 264 GWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERK 323
GW DN NGP+GL I AGKG++R+M N +AD +P DV +N W +
Sbjct: 242 GWIDNFNGPSGLFIAAGKGILRTMRASNGAVADLVPVDVVVNMTLAAAW-YSGVNRPRNI 300
Query: 324 SVCNLTSNKDYKITWQEICDIGKDIVTS--KIPFNSTLWYPGGTMTQSRLTHFICCLLFH 381
V N T+ W E + ++++ + P P +T + L + + H
Sbjct: 301 MVYNCTTGGTNPFHWSE---VEYHVISTFKRNPLEQAFRRPNVNLTSNHLLYHYWIAVSH 357
Query: 382 WIPAYFLDAVILISGNKPCLVRIQERIHRGFDVFEYYANNEWEFKNGNLHQTRPKRNARE 441
PA+ D + I+G P +++ R+H+ EY+ +N W + N+ + + +
Sbjct: 358 KAPAFLYDIYLRITGRSPRMMKTITRLHKAMVFLEYFTSNSWIWNTENMTMLMNQLSPED 417
Query: 442 IVQYCVENDNVDIVKYFEKAVYGARYFLMKESPESLESARKKMKVMYALHITARCIFLAL 501
+ + + +Y E G + +++ E L +ARK + + + I L +
Sbjct: 418 KKTFNFDVRQLHWAEYMENYCMGTKKYVLNEEMSGLPAARKHLNKLRNIRYGFNTI-LVI 476
Query: 502 FLWFLSNNFHVFLKLGLFVRGLASLVFS 529
+W +F+ R + V S
Sbjct: 477 LIW------RIFIARSQMARNIWYFVVS 498
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Gallus gallus (taxid: 9031) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q0P5J1|FACR2_BOVIN Fatty acyl-CoA reductase 2 OS=Bos taurus GN=FAR2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 279 bits (714), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 151/471 (32%), Positives = 263/471 (55%), Gaps = 10/471 (2%)
Query: 24 IAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESP 83
IA Y KSI ++G +GF+GKVL+EK+ R P++K +Y+L+R K+G+T QRV ++ +S
Sbjct: 4 IAAFYGGKSILITGATGFMGKVLMEKLFRTSPDLKVVYILVRPKQGQTLQQRVFQILDSK 63
Query: 84 VFDALKTLRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIK 143
+F+ +K + ++ +KI+ IS D+ Q IS+ D KEL+ + +I++H AAT+RFD+ ++
Sbjct: 64 LFEKVKEV-CPNVHEKIRAISADLNQNDFAISKEDMKELLSHTNIIFHCAATVRFDDHLR 122
Query: 144 TAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAE 203
AV LN T+ +L ++ QM L+ F +ISTA+ + + K ++E Y P +P ++I E
Sbjct: 123 HAVQLNVTATQQLLLMASQMPKLEAFIHISTAFSNCNLKHIDEVVYPCPVEPKKIIDSME 182
Query: 204 SMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELG-MPCMILRPSIVVPIYKEPL 262
+ + ++ ++G++PN+Y YTK L E +V + E G + I+RPSI+ ++EP
Sbjct: 183 WLDDAIIDEITPKLIGDWPNTYTYTKALGEVVVQQ--EGGNLNIAIIRPSIMGATWQEPF 240
Query: 263 PGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322
PGW DN+NGP+GL+I AGKG +RS+ +AD +PAD +N W + +
Sbjct: 241 PGWVDNLNGPSGLIIAAGKGFLRSIRATPMAVADLIPADTVVNLTLAVGW-YTAVHRPKS 299
Query: 323 KSVCNLTSNKDYKITWQEICDIGKDIVTS--KIPFNSTLWYPGGTMTQSRLTHFICCLLF 380
V + TS W + +G ++ + KIPF P T + +T +
Sbjct: 300 TLVYHCTSGNLNPCNWGK---MGLQVLATFEKIPFERAFRRPNADFTTNNITTHYWNAVS 356
Query: 381 HWIPAYFLDAVILISGNKPCLVRIQERIHRGFDVFEYYANNEWEFKNGNLHQTRPKRNAR 440
H PA D + ++G KP + ++ R+ R + EY+ N WE+ N + +
Sbjct: 357 HRAPAIIYDFYLRLTGRKPRMTKLMNRLLRTLSMLEYFVNRSWEWSTYNTEMLMSELSPE 416
Query: 441 EIVQYCVENDNVDIVKYFEKAVYGARYFLMKESPESLESARKKMKVMYALH 491
+ + + ++ ++Y E V G + +L+KE + A++ +K + +H
Sbjct: 417 DQRVFNFDVRQLNWLEYIENYVLGVKKYLLKEDMAGIPEAKQHLKRLRNIH 467
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C16, C18, C18:1 and C18:2 but low activity can be observed with C10-C14 substrates. Bos taurus (taxid: 9913) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q7TNT2|FACR2_MOUSE Fatty acyl-CoA reductase 2 OS=Mus musculus GN=Far2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 274 bits (700), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 152/473 (32%), Positives = 256/473 (54%), Gaps = 14/473 (2%)
Query: 24 IAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESP 83
IA Y NKSI ++G +GFLGKVL+EK+ R P++K IY+L+R K G+T +RV ++ S
Sbjct: 4 IAAFYSNKSILITGATGFLGKVLMEKLFRTSPHLKVIYILVRPKSGQTLQERVFQILNSK 63
Query: 84 VFDALKTLRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIK 143
+F+ +K + ++ +KI+ IS D+ Q IS+ D +EL+ +I++H AAT+RFD ++
Sbjct: 64 LFEKVKEV-CPNVHEKIRPISADLNQRDFAISKEDVQELLSCTNIIFHCAATVRFDAHLR 122
Query: 144 TAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAE 203
AV LN T+ +L ++ QM L+ F +ISTA+ + + ++E Y P +P ++I E
Sbjct: 123 EAVQLNVTATQQLLLMASQMPKLEAFIHISTAFSNCNLSHIDEVIYPCPVEPRKIIDSME 182
Query: 204 SMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELG-MPCMILRPSIVVPIYKEPL 262
+ + +E ++G+ PN+Y YTK L E +V + E G + I+RPSIV ++EP
Sbjct: 183 WLDDSIIEEITPKLIGDRPNTYTYTKALGEIVVQQ--ESGNLNVAIVRPSIVGATWQEPF 240
Query: 263 PGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESE- 321
PGW DN+NGP+GL+I GKG +RS+ +AD +P D +N W +
Sbjct: 241 PGWVDNLNGPSGLIIATGKGFLRSIKATPMAVADVIPVDTVVNLTIAVGWYTAVHRPKST 300
Query: 322 ---RKSVCNLTSNKDYKITWQEICDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFICCL 378
+ NL YK+ Q + I KIPF S P T S T
Sbjct: 301 LIYHSTSGNLNPCNWYKMGLQVLATI------EKIPFESAFRRPNADFTTSNFTTHYWNT 354
Query: 379 LFHWIPAYFLDAVILISGNKPCLVRIQERIHRGFDVFEYYANNEWEFKNGNLHQTRPKRN 438
+ H +PA D + ++G KP ++++ R+ + + EY+ N+ WE+ N + +
Sbjct: 355 VSHRVPAIIYDFYLRLTGRKPRMLKLMNRLLKTISMLEYFINHSWEWSTNNTEMLLSELS 414
Query: 439 AREIVQYCVENDNVDIVKYFEKAVYGARYFLMKESPESLESARKKMKVMYALH 491
+ + + ++ ++Y E V G + +L+KE + A++ ++ + +H
Sbjct: 415 PEDQRVFNFDVRQLNWLEYIENYVLGVKKYLLKEDLAGIPKAKQHLRRLRNIH 467
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C16, C18, C18:1 and C18:2 but low activity can be observed with C10-C14 substrates. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 543 | ||||||
| 328706792 | 559 | PREDICTED: putative fatty acyl-CoA reduc | 0.966 | 0.939 | 0.549 | 1e-180 | |
| 298402913 | 525 | fatty-acyl CoA reductase 3 [Ostrinia nub | 0.909 | 0.940 | 0.516 | 1e-154 | |
| 350423751 | 517 | PREDICTED: putative fatty acyl-CoA reduc | 0.898 | 0.943 | 0.512 | 1e-154 | |
| 340722988 | 517 | PREDICTED: putative fatty acyl-CoA reduc | 0.898 | 0.943 | 0.514 | 1e-154 | |
| 156551579 | 517 | PREDICTED: putative fatty acyl-CoA reduc | 0.917 | 0.963 | 0.500 | 1e-153 | |
| 332021355 | 544 | Putative fatty acyl-CoA reductase [Acrom | 0.891 | 0.889 | 0.521 | 1e-151 | |
| 383858922 | 517 | PREDICTED: putative fatty acyl-CoA reduc | 0.917 | 0.963 | 0.494 | 1e-151 | |
| 66547347 | 516 | PREDICTED: putative fatty acyl-CoA reduc | 0.900 | 0.947 | 0.498 | 1e-150 | |
| 307176725 | 985 | Fatty acyl-CoA reductase 1 [Camponotus f | 0.893 | 0.492 | 0.516 | 1e-150 | |
| 298569765 | 516 | putative fatty acyl-CoA reductase [Apis | 0.900 | 0.947 | 0.496 | 1e-149 |
| >gi|328706792|ref|XP_001949683.2| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 636 bits (1641), Expect = e-180, Method: Compositional matrix adjust.
Identities = 289/526 (54%), Positives = 394/526 (74%), Gaps = 1/526 (0%)
Query: 12 TIPKELQALPDRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKT 71
+P EL LPDR++KT+ K+IF++GGSGFLGKVLIEK+LR P++++IYLL+RTKKG
Sbjct: 23 VLPDELSHLPDRVSKTFVGKTIFITGGSGFLGKVLIEKLLRKCPDIERIYLLLRTKKGSN 82
Query: 72 PNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYH 131
P QRVE +F S +FD LK LRG +L K+ I+GD+++ L I+E D++ L D V IVYH
Sbjct: 83 PKQRVETIFSSVLFDYLKELRGVEVLNKVYPIAGDVSEPNLAINESDRRLLADTVQIVYH 142
Query: 132 VAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLP 191
AATIRFDE +K AV+LNTRGT+ +LEL+K+MKNL+ F Y+ST+YCH EKVL E+ Y P
Sbjct: 143 AAATIRFDEALKKAVLLNTRGTKMVLELAKEMKNLQVFVYVSTSYCHLEEKVLFEKAYPP 202
Query: 192 PDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRP 251
P DPH++I E + E +E ++ILG FPNSYA+TKCL+E LV E +E G+PC+I RP
Sbjct: 203 PADPHKIIQSMEMLDEPFVETISKEILGSFPNSYAFTKCLSEHLVVEQIEAGLPCIIARP 262
Query: 252 SIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFT 311
SIV+PI+KEPLPGWTDNINGPTGLLIGAGKGVIR+M+C N G AD+LP D+ +NG+ LFT
Sbjct: 263 SIVIPIWKEPLPGWTDNINGPTGLLIGAGKGVIRTMFCHNQGYADYLPVDITVNGIILFT 322
Query: 312 WDFLNSKESERKSVCNLTSNKDYKITWQEICDIGKDIVTSKIPFNSTLWYPGGTMTQSRL 371
W+++ + ++ R ++C+LTS++++++TWQEI DIGK IVT+++P N +WYPGG+M S+L
Sbjct: 323 WNYIGNNDTTR-TICHLTSSQEWRVTWQEIIDIGKSIVTTEVPLNGAVWYPGGSMKSSKL 381
Query: 372 THFICCLLFHWIPAYFLDAVILISGNKPCLVRIQERIHRGFDVFEYYANNEWEFKNGNLH 431
H IC H IPAYFLDAVI +SGNKPCLVRIQ+RI++GF+VFEYYANN+WEF+N ++H
Sbjct: 382 VHNICVFFLHTIPAYFLDAVIYLSGNKPCLVRIQDRINKGFEVFEYYANNQWEFRNEHVH 441
Query: 432 QTRPKRNAREIVQYCVENDNVDIVKYFEKAVYGARYFLMKESPESLESARKKMKVMYALH 491
R N RE +Y V+ +++DI YF + AR +++KE+P++L AR MK+MY +
Sbjct: 442 YMRRIMNQREKFEYKVDGNDMDIRNYFRDCIMAARIYILKETPDTLPRARIHMKIMYYVD 501
Query: 492 ITARCIFLALFLWFLSNNFHVFLKLGLFVRGLASLVFSSSADSTTS 537
I A+ +F +L LW + + +GL + L L F S + S
Sbjct: 502 IIAKILFFSLLLWTIFKWSDTIIAIGLLLYNLVRLFFKSIFSTINS 547
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|298402913|gb|ADI82776.1| fatty-acyl CoA reductase 3 [Ostrinia nubilalis] | Back alignment and taxonomy information |
|---|
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 257/498 (51%), Positives = 358/498 (71%), Gaps = 4/498 (0%)
Query: 16 ELQALPDRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQR 75
E+ A+ DRIA TY S+F++GG+GF+GKVLIEK+LR +++IYLL+R KKGKTP QR
Sbjct: 10 EVDAMTDRIAATYAGLSVFVTGGTGFMGKVLIEKLLRKCTEIRQIYLLVRPKKGKTPKQR 69
Query: 76 VEELFESPVFDALKTLRG--KSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVA 133
+EELF+ +F+ L+ LRG + IL+K+ +ISGD+++ L +SE D++ LI+NVDI+ H A
Sbjct: 70 LEELFQGELFEQLRNLRGGVEPILEKVTLISGDVSEPDLAMSEADRQLLIENVDIIIHAA 129
Query: 134 ATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPD 193
ATIRFDE +K AV+LN RGT+ ++EL+K K LK F +ISTAYCH EK+LEE+ Y PP
Sbjct: 130 ATIRFDEELKKAVLLNVRGTKLIVELAKTCKKLKLFIHISTAYCHLHEKLLEEKPYPPPA 189
Query: 194 DPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGM-PCMILRPS 252
DPHQ+I E M EE + +L + PNSYA+TK L E +V E ME + P MILRPS
Sbjct: 190 DPHQIIQAMEWMDEETVAQLTPKLLDKLPNSYAFTKALGEAVVVEAMEADLIPAMILRPS 249
Query: 253 IVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTW 312
IV+PI++EPLPGWTDNINGPTGLLIGAGKGVIR+MYCK+ AD+LP DV ING+ + W
Sbjct: 250 IVIPIWQEPLPGWTDNINGPTGLLIGAGKGVIRTMYCKSNSYADYLPVDVFINGIMISAW 309
Query: 313 DFLNSKESERKSVCNLTSNKDYKITWQEICDIGKDIVTSKIPFNSTLWYPGGTMTQSRLT 372
+++ + + + V N TS+ + K+TW E+ D G++I+ +++P N +WYPGG+M SRL
Sbjct: 310 NYITYGDKKSR-VVNFTSSAEIKVTWLEMIDAGREIIMNRVPLNGVVWYPGGSMKHSRLY 368
Query: 373 HFICCLLFHWIPAYFLDAVILISGNKPCLVRIQERIHRGFDVFEYYANNEWEFKNGNLHQ 432
H IC L FHWIPA +D ++ G KP L+R+ RI +GF+VFEYY NN+W+FK+
Sbjct: 369 HNICALFFHWIPAILIDILLFCLGYKPILMRVHRRISKGFEVFEYYTNNQWDFKSDIAQT 428
Query: 433 TRPKRNAREIVQYCVENDNVDIVKYFEKAVYGARYFLMKESPESLESARKKMKVMYALHI 492
R + N RE Y V+ +DI+KYFE + AR +++KE ++L +AR+ M+VMY + +
Sbjct: 429 VRLRLNTRERRDYKVDAVGLDIMKYFEDCIKAARIYILKEYDDTLPAARRHMRVMYWVDV 488
Query: 493 TARCIFLALFLWFLSNNF 510
A+C+F L L+++S F
Sbjct: 489 IAQCLFWGLILYWISGWF 506
|
Source: Ostrinia nubilalis Species: Ostrinia nubilalis Genus: Ostrinia Family: Crambidae Order: Lepidoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|350423751|ref|XP_003493580.1| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 252/492 (51%), Positives = 362/492 (73%), Gaps = 4/492 (0%)
Query: 18 QALPDRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVE 77
+ +PDRIA+T+E ++I ++GG+GFLGKV+IEK+LR N K+IY+L+RTKK K P R+E
Sbjct: 7 EDIPDRIAETFEGQNILITGGTGFLGKVVIEKLLRCVQNTKQIYMLIRTKKEKDPKHRLE 66
Query: 78 ELFESPVFDALKTLRGKSILQK-IQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATI 136
E+F SP+F+ +K RG +L+K + V+SGD++ LGIS D+K L + ++IVYH AAT+
Sbjct: 67 EIFNSPLFEKVKRQRGAEVLKKSVTVVSGDVSLPGLGISSEDRKMLCEKINIVYHAAATV 126
Query: 137 RFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPH 196
RFDE +K AV+LNTRGT+ MLEL+K+MK+LK F +ISTAYCH EK+L E+ Y PP DPH
Sbjct: 127 RFDELLKKAVLLNTRGTKQMLELAKEMKHLKLFAHISTAYCHLEEKILREKPYPPPADPH 186
Query: 197 QVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVP 256
++I E M ++ +E ILG PN+YA+TK L+EGLV E M +P +ILRPSIV+P
Sbjct: 187 KIIKCVEWMDDDVVEAMTDKILGHLPNTYAFTKALSEGLVEEAMP-HIPAIILRPSIVIP 245
Query: 257 IYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLN 316
I+KEP+PGWTDNINGPTGLLIGAGKGVIR+MYC ++ AD+LP D+A+N + +W+F+
Sbjct: 246 IWKEPVPGWTDNINGPTGLLIGAGKGVIRTMYCNDSSYADYLPVDIAVNAILASSWNFIY 305
Query: 317 SKESERKSVCNLTSNKDYKITWQEICDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFIC 376
K+ E++ V NLTS+ ++K++W EI G+ I T K+P N +WYPGG+M +SRL H IC
Sbjct: 306 CKDHEKR-VYNLTSSSEFKVSWAEIIARGRKI-TEKVPLNGVVWYPGGSMKKSRLMHNIC 363
Query: 377 CLLFHWIPAYFLDAVILISGNKPCLVRIQERIHRGFDVFEYYANNEWEFKNGNLHQTRPK 436
LLFH IPAY +D +I ++G KP + R+Q RI +GF+VFEYYANN+W+F N N+ + R K
Sbjct: 364 VLLFHMIPAYLIDGLIFLAGYKPIMCRVQRRIQKGFEVFEYYANNQWDFDNSNIFELRNK 423
Query: 437 RNAREIVQYCVENDNVDIVKYFEKAVYGARYFLMKESPESLESARKKMKVMYALHITARC 496
N E +Y + ++DI YFE + AR +++ E PE+L +AR+ +++MY + + +
Sbjct: 424 LNPVEYKKYQLHGKDMDIDAYFETCIRAARIYILNEPPETLPAARRHLRIMYWVDVITKI 483
Query: 497 IFLALFLWFLSN 508
+F L ++ +++
Sbjct: 484 LFFVLLIYMVAS 495
|
Source: Bombus impatiens Species: Bombus impatiens Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|340722988|ref|XP_003399881.1| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Bombus terrestris] | Back alignment and taxonomy information |
|---|
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 253/492 (51%), Positives = 361/492 (73%), Gaps = 4/492 (0%)
Query: 18 QALPDRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVE 77
+ +PDRIA+T+E ++I ++GG+GFLGKV+IEK+LR N K+IY+L+RTKK K P R+E
Sbjct: 7 EDIPDRIAETFEGQNILITGGTGFLGKVVIEKLLRCVQNTKQIYMLIRTKKEKDPKHRLE 66
Query: 78 ELFESPVFDALKTLRGKSILQK-IQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATI 136
E+F SP+F+ +K RG IL+K + VISGD++ LGIS D+K L + ++IVYH AAT+
Sbjct: 67 EIFNSPLFEKVKRQRGAEILKKSVTVISGDVSLPGLGISSEDRKMLCEKINIVYHAAATV 126
Query: 137 RFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPH 196
RFDE +K AV+LNTRGT+ MLEL+K+MK+LK F +ISTAYCH EK+L E+ Y PP DPH
Sbjct: 127 RFDELLKKAVLLNTRGTKQMLELAKEMKHLKLFAHISTAYCHLEEKILREKPYPPPADPH 186
Query: 197 QVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVP 256
++I E M ++ +E ILG PN+YA+TK L+E LV E M +P +ILRPSIV+P
Sbjct: 187 KIIKCVEWMDDDVVEAMTDKILGHLPNTYAFTKALSESLVEEAMP-HIPAIILRPSIVIP 245
Query: 257 IYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLN 316
I+KEP+PGWTDNINGPTGLLIGAGKGVIR+MYC ++ AD+LP D+A+N + +W+F+
Sbjct: 246 IWKEPVPGWTDNINGPTGLLIGAGKGVIRTMYCNDSSYADYLPVDIAVNAILASSWNFIY 305
Query: 317 SKESERKSVCNLTSNKDYKITWQEICDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFIC 376
K+ E++ V NLTS+ ++K++W EI G+ I T K+P N +WYPGG+M +SRL H IC
Sbjct: 306 CKDHEKR-VYNLTSSSEFKVSWAEIIARGRRI-TEKVPLNGVVWYPGGSMKKSRLMHNIC 363
Query: 377 CLLFHWIPAYFLDAVILISGNKPCLVRIQERIHRGFDVFEYYANNEWEFKNGNLHQTRPK 436
LLFH IPAY +D +I ++G KP + R+Q RI +GF+VFEYYANN+W+F N N+ + R K
Sbjct: 364 VLLFHMIPAYLIDGLIFLAGYKPIMCRVQRRIQKGFEVFEYYANNQWDFDNSNIFELRNK 423
Query: 437 RNAREIVQYCVENDNVDIVKYFEKAVYGARYFLMKESPESLESARKKMKVMYALHITARC 496
N E +Y + ++DI YFE + AR +++ E PE+L +AR+ +++MY + + +
Sbjct: 424 LNPVEYEKYQLHGKDMDIDAYFETCIRAARIYILNEPPETLPAARRHLRIMYWVDVITKI 483
Query: 497 IFLALFLWFLSN 508
+F L ++ +++
Sbjct: 484 LFFVLLIYMVAS 495
|
Source: Bombus terrestris Species: Bombus terrestris Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|156551579|ref|XP_001601970.1| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 546 bits (1408), Expect = e-153, Method: Compositional matrix adjust.
Identities = 253/505 (50%), Positives = 363/505 (71%), Gaps = 7/505 (1%)
Query: 17 LQALPDRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRV 76
L+ LPDRI T++ + I ++GG+GFLGKVL+EK LR P + ++YLL+R KKGK P R+
Sbjct: 6 LEDLPDRIGATFKGRDILITGGTGFLGKVLVEKFLRCLPEINQLYLLVRPKKGKDPKHRL 65
Query: 77 EELFESPVFDALKTLRG-KSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAAT 135
+++F S +F+ +K LRG + + +K+ +ISGD++ LGIS D+K L + + IVYH AAT
Sbjct: 66 DDIFNSALFEKVKELRGVEGLKKKVTIISGDVSHPGLGISAEDRKLLCERISIVYHGAAT 125
Query: 136 IRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDP 195
+RFDE +K AVILNTRGT+ ML+L+K MK L+ F +ISTAYCH EKVL E+ Y PP DP
Sbjct: 126 VRFDELLKRAVILNTRGTKQMLDLAKDMKKLELFAHISTAYCHLEEKVLGEKPYPPPADP 185
Query: 196 HQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVV 255
H++I E M++E +E ILG+ PN+YA+TK L+EGLV E M +P +ILRPSIV+
Sbjct: 186 HKIIKCVEWMEDEVVEAMTDKILGDLPNTYAFTKALSEGLVEEVMN-DIPAIILRPSIVI 244
Query: 256 PIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFL 315
PI+KEP+ GWTDNINGPTGLLIGAGKGVIR+MYC G AD++P D+ +N + TW+++
Sbjct: 245 PIWKEPVAGWTDNINGPTGLLIGAGKGVIRTMYCNENGYADYVPVDIGVNAILAVTWNYI 304
Query: 316 NSKESERKSVCNLTSNKDYKITWQEICDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFI 375
+K+ E++ V NLTS+ ++K++W EI + G+ I T K+P N +WYPGG+M +SRL H I
Sbjct: 305 GNKQHEKR-VYNLTSSSEFKVSWAEIIERGRRI-TEKVPLNGVVWYPGGSMKKSRLMHNI 362
Query: 376 CCLLFHWIPAYFLDAVILISGNKPCLVRIQERIHRGFDVFEYYANNEWEFKNGNLHQTRP 435
C L FH IPAY +D +I ++G+KP + R+ RI +GF+VFEYYANN+W+F+N N+ + R
Sbjct: 363 CVLFFHMIPAYLIDMLIFLAGHKPIMCRVHRRIQKGFEVFEYYANNQWDFENANIAELRS 422
Query: 436 KRNAREIVQYCVENDNVDIVKYFEKAVYGARYFLMKESPESLESARKKMKVMYALHITAR 495
+N +E V Y + D++D+ YFE + AR F++ E PE+L +AR+ M+VMY + I +
Sbjct: 423 LQNEKEKVLYQLHGDDMDLDNYFENCIRAARVFILNEPPETLPAARRHMRVMYWVDIVTK 482
Query: 496 CIFLALFLWFL---SNNFHVFLKLG 517
+F L ++ + S++F L G
Sbjct: 483 ILFFVLLIYTMACWSDSFKALLVGG 507
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|332021355|gb|EGI61729.1| Putative fatty acyl-CoA reductase [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 255/489 (52%), Positives = 357/489 (73%), Gaps = 5/489 (1%)
Query: 21 PDRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELF 80
PDR+A+ + I ++GG+GFLGKVLIEKILR P+V+ IY+L+R KKGK P QR++E+F
Sbjct: 38 PDRVAEILAGRKILVTGGTGFLGKVLIEKILRCLPDVEHIYMLVRPKKGKDPKQRLDEIF 97
Query: 81 ESPVFDALKTLRGKSILQK-IQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFD 139
SP+F+ ++T RG S L+K + I+GD+ LG+S D+K LI+NV+IVYH AAT+RFD
Sbjct: 98 NSPLFEKVRTQRGLSALEKAVTAINGDVALPGLGLSPEDRKILIENVNIVYHGAATVRFD 157
Query: 140 EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVI 199
E +K AV+LNTRGT+ M+EL+K+MK+L F +ISTAYCH E++L E+TY PP DPHQVI
Sbjct: 158 ELLKRAVLLNTRGTKLMIELAKEMKHLLVFLHISTAYCHLEEQILREKTYPPPADPHQVI 217
Query: 200 LRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYK 259
E M ++ +E ILG+ PN+YA+TK L+E LV E M +P +ILRPS+++PI+K
Sbjct: 218 KCVEWMDDDVVEAMTDKILGKLPNTYAFTKALSESLVEESMS-HIPAIILRPSVIIPIWK 276
Query: 260 EPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKE 319
EP+PGWTDNINGPTGLLIGAGKGVIR+M+C G AD+LP D+A+NG+ L TW+F+ K+
Sbjct: 277 EPIPGWTDNINGPTGLLIGAGKGVIRTMFCNENGYADYLPVDIAVNGLLLATWNFIYFKD 336
Query: 320 SERKSVCNLTSNKDYKITWQEICDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFICCLL 379
K V N+TS+ + KITW EI G+ I T +IP N WYPGG++ +SRL H IC L
Sbjct: 337 E--KHVFNMTSSAEIKITWAEIIKRGRKI-TERIPLNGVAWYPGGSLKKSRLMHNICILF 393
Query: 380 FHWIPAYFLDAVILISGNKPCLVRIQERIHRGFDVFEYYANNEWEFKNGNLHQTRPKRNA 439
FH IPAY +DA + ++G KP + IQ RI++GF+VFEYYANN+W+F+N + + R K N+
Sbjct: 394 FHMIPAYIIDAFLFLAGYKPIMCHIQRRINKGFEVFEYYANNQWDFENKYVEELREKINS 453
Query: 440 REIVQYCVENDNVDIVKYFEKAVYGARYFLMKESPESLESARKKMKVMYALHITARCIFL 499
E Y V +++DI KYFE + AR +++KE PE+L +AR+ ++VMY + + + +F
Sbjct: 454 TECKNYQVHGNDLDIDKYFEDCIRAARIYILKEMPETLPAARRHLRVMYWVDVFTKILFF 513
Query: 500 ALFLWFLSN 508
++ L++
Sbjct: 514 VFIIYLLAS 522
|
Source: Acromyrmex echinatior Species: Acromyrmex echinatior Genus: Acromyrmex Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383858922|ref|XP_003704948.1| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 248/502 (49%), Positives = 365/502 (72%), Gaps = 4/502 (0%)
Query: 16 ELQALPDRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQR 75
+++ +PDRI +T+++++I ++GG+GFLGKV++EK LR P +++YLL+R+KK K P R
Sbjct: 5 KVEEIPDRILETFKDQNILITGGTGFLGKVIVEKFLRCIPVTQQLYLLVRSKKNKDPKHR 64
Query: 76 VEELFESPVFDALKTLRGKSILQK-IQVISGDITQLKLGISEIDKKELIDNVDIVYHVAA 134
+EE+F SP+F+ +K RG L K + V++GD++ LG+S D++ L + ++IVYH AA
Sbjct: 65 IEEIFNSPLFEQVKQKRGMEELHKAVTVVNGDVSLPGLGLSPEDRRMLCEKINIVYHGAA 124
Query: 135 TIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDD 194
T+RFDE +K AV+LNTRGT+ MLEL+K+MK+LK F +ISTAYCH EK+L E+ Y PP D
Sbjct: 125 TVRFDELLKKAVLLNTRGTKQMLELAKEMKHLKLFAHISTAYCHLEEKILGEKPYPPPAD 184
Query: 195 PHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIV 254
PH++I E M +E +E ILG+ PN+YA+TK L+EGLV E M +P +ILRPSIV
Sbjct: 185 PHKIIKCVEWMDDEVVEAMTDKILGDLPNTYAFTKALSEGLVNEAMS-QIPAIILRPSIV 243
Query: 255 VPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDF 314
+P++KEP+PGWTDNINGPTGLLI AGKGVIR+MYC G AD+LP D+A+N + +W+F
Sbjct: 244 IPVWKEPIPGWTDNINGPTGLLIAAGKGVIRTMYCNENGYADYLPVDIAVNVILASSWNF 303
Query: 315 LNSKESERKSVCNLTSNKDYKITWQEICDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHF 374
+ K+ E++ V NLTS+ ++K++W EI G+ I T K+P N +WYPGG+M +SRL H
Sbjct: 304 IYLKDHEKR-VYNLTSSSEFKVSWAEIIARGRKI-TEKVPLNGVVWYPGGSMKKSRLIHN 361
Query: 375 ICCLLFHWIPAYFLDAVILISGNKPCLVRIQERIHRGFDVFEYYANNEWEFKNGNLHQTR 434
IC LFH IPAY +DA+I ++G KP + R+Q RI +GF+VFEYYANN+W+F+N N+++ R
Sbjct: 362 ICVFLFHTIPAYLIDALIFLAGYKPIMCRVQRRIQKGFEVFEYYANNQWDFENKNIYEIR 421
Query: 435 PKRNAREIVQYCVENDNVDIVKYFEKAVYGARYFLMKESPESLESARKKMKVMYALHITA 494
K N E +Y + +++DI YFE + AR +++ E PE+L +AR+ +K+MY + +
Sbjct: 422 EKLNPIEYKKYQIHGEDMDIDAYFETCIRAARIYILNEPPETLPAARRHLKLMYWVDVIT 481
Query: 495 RCIFLALFLWFLSNNFHVFLKL 516
+ +F L ++ L++ F L
Sbjct: 482 KIVFFILLIYVLASWSECFRAL 503
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|66547347|ref|XP_624493.1| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Apis mellifera] | Back alignment and taxonomy information |
|---|
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 246/493 (49%), Positives = 358/493 (72%), Gaps = 4/493 (0%)
Query: 17 LQALPDRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRV 76
++ + DRI ++++N++I ++GG+GFLGKV++EK LR P++K+IYLL+RTK K P R+
Sbjct: 1 MEEIFDRIEESFKNQNILITGGTGFLGKVIVEKFLRCLPDIKQIYLLIRTKHEKDPKYRL 60
Query: 77 EELFESPVFDALKTLRGKSILQK-IQVISGDITQLKLGISEIDKKELIDNVDIVYHVAAT 135
EE+F SP+F+ +K RG L+K + VI+GD+T L +S D+K L + ++IVYH AA+
Sbjct: 61 EEIFNSPLFEKVKKQRGAETLKKSVTVINGDMTLPGLSLSLEDRKMLCEKINIVYHAAAS 120
Query: 136 IRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDP 195
+RFDE +K AV+LNTRGT++MLEL+K+MK+LK F YISTAYCH EK+LEE+ Y PP DP
Sbjct: 121 VRFDEMLKKAVLLNTRGTKEMLELAKEMKHLKLFAYISTAYCHLEEKILEEKPYPPPIDP 180
Query: 196 HQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVV 255
H++I E M ++ +E IL FPN+YA+TK L+E LV E M +P +ILRPSIV+
Sbjct: 181 HKIIKCVEWMDDDVVEAMTGKILAHFPNTYAFTKALSEALVEEAMPY-IPAIILRPSIVI 239
Query: 256 PIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFL 315
PI+KEPLPGWTDNINGPTG+LIGAGKGV+R+MYC + ADFLP D+A+N + +W+F+
Sbjct: 240 PIWKEPLPGWTDNINGPTGILIGAGKGVLRTMYCNGSSYADFLPVDIAVNAILASSWNFI 299
Query: 316 NSKESERKSVCNLTSNKDYKITWQEICDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFI 375
K+ E++ V +LTS+ ++K+ W+EI G+ I T ++P N +WYPGG++ +SRL H I
Sbjct: 300 YCKDHEKR-VYHLTSSNEFKVPWEEIIARGRKI-TERVPLNGVVWYPGGSIKKSRLMHNI 357
Query: 376 CCLLFHWIPAYFLDAVILISGNKPCLVRIQERIHRGFDVFEYYANNEWEFKNGNLHQTRP 435
C FH IPAYF+DA+I ++G KP + R+Q RI +GF+VFEYY NN+W+F N N + R
Sbjct: 358 CVFFFHIIPAYFIDALIFLAGYKPIMCRVQRRIQKGFEVFEYYTNNQWDFDNSNFMEVRS 417
Query: 436 KRNAREIVQYCVENDNVDIVKYFEKAVYGARYFLMKESPESLESARKKMKVMYALHITAR 495
K N E +Y V D++DI YFE + AR +++ E PE+L +AR+ +++MY + + +
Sbjct: 418 KLNPVEYAKYQVHGDDMDIDAYFEACIRAARIYILNEPPETLPAARRHLRIMYWIDVITK 477
Query: 496 CIFLALFLWFLSN 508
FL L ++ ++
Sbjct: 478 IFFLILLIYIFAS 490
|
Source: Apis mellifera Species: Apis mellifera Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307176725|gb|EFN66140.1| Fatty acyl-CoA reductase 1 [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust.
Identities = 253/490 (51%), Positives = 357/490 (72%), Gaps = 5/490 (1%)
Query: 20 LPDRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEEL 79
+PDRI +T+ + I ++GG+GFLGKV++EK LR P + +IY+L+R KKGK P QR+ E+
Sbjct: 478 VPDRIIETFAGRKIMVTGGTGFLGKVMLEKFLRCLPEIAQIYMLIRLKKGKDPKQRLLEI 537
Query: 80 FESPVFDALKTLRGKSILQK-IQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRF 138
+SP+F+ +K RG LQK I V+SGD++Q LG+S D+K L +NV+IVYH AAT+RF
Sbjct: 538 LDSPLFEKVKAERGLLALQKAITVVSGDVSQPGLGLSPEDRKMLCENVEIVYHGAATVRF 597
Query: 139 DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQV 198
DE +K AV+LN RGT+ M+EL+K+MKNL F +ISTAYCH EK+L E+TY PP DPH++
Sbjct: 598 DELLKKAVLLNARGTKQMIELAKEMKNLLLFVHISTAYCHLEEKILYEKTYPPPADPHKI 657
Query: 199 ILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIY 258
I E M ++ +E ILG PN+YA+TK LAEGLV E M +P MILRPS+V+PI+
Sbjct: 658 IKCVEWMDDDVVEAMTDKILGTLPNTYAFTKALAEGLVEESMPY-IPSMILRPSVVIPIW 716
Query: 259 KEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSK 318
K+PLPGWTDNINGPTGLLIGAGKGVIR+MYC G AD+LPAD+AIN + L T +F+ K
Sbjct: 717 KDPLPGWTDNINGPTGLLIGAGKGVIRTMYCNENGYADYLPADIAINAILLCTCNFIYFK 776
Query: 319 ESERKSVCNLTSNKDYKITWQEICDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFICCL 378
+ +R V NLTS+ ++K+ W EI +G++I T ++P N LWYPGG+M +SRL H IC +
Sbjct: 777 DDQR--VYNLTSSSEFKVPWTEIIKLGREI-TQRVPLNGILWYPGGSMKKSRLLHNICVI 833
Query: 379 LFHWIPAYFLDAVILISGNKPCLVRIQERIHRGFDVFEYYANNEWEFKNGNLHQTRPKRN 438
LFH IPAY +D ++ + G KP L R+Q RI++GF+VFEYYAN +W+F N ++ R + N
Sbjct: 834 LFHLIPAYIIDTLLFLLGYKPILCRVQRRINKGFEVFEYYANRQWDFDNSSVLSARKRMN 893
Query: 439 AREIVQYCVENDNVDIVKYFEKAVYGARYFLMKESPESLESARKKMKVMYALHITARCIF 498
+ E +Y V D++D +YFE + AR +++KE+P++L +AR+ ++VMY + + +
Sbjct: 894 SLEYNKYQVHGDDMDKGEYFEACIRAARIYILKETPDTLPAARRHLRVMYWVDVFTKFFL 953
Query: 499 LALFLWFLSN 508
L ++ L++
Sbjct: 954 FLLLIYVLAS 963
|
Source: Camponotus floridanus Species: Camponotus floridanus Genus: Camponotus Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|298569765|gb|ADI87411.1| putative fatty acyl-CoA reductase [Apis mellifera] | Back alignment and taxonomy information |
|---|
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 245/493 (49%), Positives = 357/493 (72%), Gaps = 4/493 (0%)
Query: 17 LQALPDRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRV 76
++ + DRI ++++N++I ++GG+GFLGKV++EK LR P++K+IYLL+RTK K P R+
Sbjct: 1 MEEIFDRIEESFKNQNILITGGTGFLGKVIVEKFLRCLPDIKQIYLLIRTKHEKDPKYRL 60
Query: 77 EELFESPVFDALKTLRGKSILQK-IQVISGDITQLKLGISEIDKKELIDNVDIVYHVAAT 135
E+F SP+F+ +K RG L+K + VI+GD+T L +S D+K L + ++IVYH AA+
Sbjct: 61 GEIFNSPLFEKVKKQRGAETLKKSVTVINGDMTLPGLSLSLEDRKMLCEKINIVYHAAAS 120
Query: 136 IRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDP 195
+RFDE +K AV+LNTRGT++MLEL+K+MK+LK F YISTAYCH EK+LEE+ Y PP DP
Sbjct: 121 VRFDEMLKKAVLLNTRGTKEMLELAKEMKHLKLFAYISTAYCHLEEKILEEKPYPPPIDP 180
Query: 196 HQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVV 255
H++I E M ++ +E IL FPN+YA+TK L+E LV E M +P +ILRPSIV+
Sbjct: 181 HKIIKCVEWMDDDVVEAMTGKILAHFPNTYAFTKALSEALVEEAMPY-IPAIILRPSIVI 239
Query: 256 PIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFL 315
PI+KEPLPGWTDNINGPTG+LIGAGKGV+R+MYC + ADFLP D+A+N + +W+F+
Sbjct: 240 PIWKEPLPGWTDNINGPTGILIGAGKGVLRTMYCNGSSYADFLPVDIAVNAILASSWNFI 299
Query: 316 NSKESERKSVCNLTSNKDYKITWQEICDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFI 375
K+ E++ V +LTS+ ++K+ W+EI G+ I T ++P N +WYPGG++ +SRL H I
Sbjct: 300 YCKDHEKR-VYHLTSSNEFKVPWEEIIARGRKI-TERVPLNGVVWYPGGSIKKSRLMHNI 357
Query: 376 CCLLFHWIPAYFLDAVILISGNKPCLVRIQERIHRGFDVFEYYANNEWEFKNGNLHQTRP 435
C FH IPAYF+DA+I ++G KP + R+Q RI +GF+VFEYY NN+W+F N N + R
Sbjct: 358 CVFFFHIIPAYFIDALIFLAGYKPIMCRVQRRIQKGFEVFEYYTNNQWDFDNSNFMEVRS 417
Query: 436 KRNAREIVQYCVENDNVDIVKYFEKAVYGARYFLMKESPESLESARKKMKVMYALHITAR 495
K N E +Y V D++DI YFE + AR +++ E PE+L +AR+ +++MY + + +
Sbjct: 418 KLNPVEYAKYQVHGDDMDIDAYFEACIRAARIYILNEPPETLPAARRHLRIMYWIDVITK 477
Query: 496 CIFLALFLWFLSN 508
FL L ++ ++
Sbjct: 478 IFFLILLIYIFAS 490
|
Source: Apis mellifera Species: Apis mellifera Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 543 | ||||||
| FB|FBgn0033464 | 517 | CG1441 [Drosophila melanogaste | 0.898 | 0.943 | 0.469 | 4.3e-125 | |
| FB|FBgn0043792 | 506 | CG30427 [Drosophila melanogast | 0.895 | 0.960 | 0.369 | 1.3e-91 | |
| FB|FBgn0039131 | 531 | CG12268 [Drosophila melanogast | 0.924 | 0.945 | 0.350 | 1.2e-88 | |
| FB|FBgn0029821 | 494 | CG4020 [Drosophila melanogaste | 0.874 | 0.961 | 0.374 | 1e-84 | |
| FB|FBgn0034145 | 625 | CG5065 [Drosophila melanogaste | 0.869 | 0.755 | 0.379 | 5.6e-84 | |
| FB|FBgn0039620 | 517 | CG1443 [Drosophila melanogaste | 0.887 | 0.932 | 0.330 | 1.4e-80 | |
| FB|FBgn0034142 | 516 | CG8306 [Drosophila melanogaste | 0.869 | 0.914 | 0.351 | 2.4e-76 | |
| RGD|1306647 | 515 | Far1 "fatty acyl CoA reductase | 0.933 | 0.984 | 0.325 | 2.2e-73 | |
| UNIPROTKB|Q66H50 | 515 | Far1 "Fatty acyl-CoA reductase | 0.933 | 0.984 | 0.325 | 2.2e-73 | |
| UNIPROTKB|G8ENM4 | 515 | FAR1 "Uncharacterized protein" | 0.935 | 0.986 | 0.320 | 4.6e-73 |
| FB|FBgn0033464 CG1441 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 1229 (437.7 bits), Expect = 4.3e-125, P = 4.3e-125
Identities = 230/490 (46%), Positives = 330/490 (67%)
Query: 22 DRIAKTYENKSIXXXXXXXXXXKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFE 81
DRIA+ ++ +S+ KVL+EK+LR +K+IYLL+R KKGK P +R++++F+
Sbjct: 26 DRIAECFKGRSLFITGGTGFLGKVLVEKLLRSCGGLKRIYLLIRPKKGKDPQERIKDIFQ 85
Query: 82 SPVFDALKTLRGKS-ILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDE 140
+ +FD +K +RG+ ILQ++ I+GD+ LGISE D + L V IVYH AAT+RFDE
Sbjct: 86 NVLFDQVKQMRGEEHILQQVVAIAGDVLSPGLGISEKDLETLRQEVSIVYHCAATVRFDE 145
Query: 141 PIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVIL 200
P++ AV +NTRGT+ MLEL+ +K+L F Y STAYCH K L E+ Y PP DPH+V+
Sbjct: 146 PLRNAVFMNTRGTKYMLELALTLKHLDFFAYCSTAYCHLHVKTLYEKPYDPPADPHKVMQ 205
Query: 201 RAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKE 260
E + ++++ + +LG PN+YAYTK LAE LV E E +P +ILRPSIV+PI+KE
Sbjct: 206 ACEWLTDDEVATIERKVLGAIPNTYAYTKSLAEALVVEKFE-ELPAVILRPSIVIPIWKE 264
Query: 261 PLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKES 320
P+PGWTDNINGPTGLLIGAGKGVIR+MYC ++G DFLP DVA+NG+ + +W + +
Sbjct: 265 PIPGWTDNINGPTGLLIGAGKGVIRTMYCNSSGYGDFLPVDVAVNGILVASWRNITAGTD 324
Query: 321 ERKSVCNLTSNKDYKITWQEICDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFICCLLF 380
+ V ++TS+ D K++W EI ++G+ ++ +K+P N WYPGG+M + HFIC +LF
Sbjct: 325 KTNRVAHMTSSNDIKVSWAEIIELGRWVIENKVPLNGVAWYPGGSMKSNYWVHFICMVLF 384
Query: 381 HWIPAYFLDAVILISGNKPCLVRIQERIHRGFDVFEYYANNEWEFKNGNLHQTRPKRNAR 440
W+PA F+DA++ I P L R+Q RI++GF+VFEYYANN W F N + R N +
Sbjct: 385 QWMPALFVDALLWILRYPPVLCRVQNRIYKGFEVFEYYANNVWNFDNSEAVKLRKLMNNK 444
Query: 441 EIVQYCVENDNVDIVKYFEKAVYGARYFLMKESPESLESARKKMKVMYALHITARCIFLA 500
E Y +E +D++ YF V AR ++KES ES+ +AR+ MKVM+ + + I++
Sbjct: 445 ERRTYVIEKIELDLIDYFTNCVLCARRLILKESDESIPAARRHMKVMWVVDKVYKGIWIF 504
Query: 501 LFLWFLSNNF 510
L+ L F
Sbjct: 505 GILYMLYRCF 514
|
|
| FB|FBgn0043792 CG30427 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 913 (326.5 bits), Expect = 1.3e-91, P = 1.3e-91
Identities = 181/490 (36%), Positives = 297/490 (60%)
Query: 24 IAKTYENKSIXXXXXXXXXXKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESP 83
+ + Y++K+I KVL+EK+L ++K++ ++ R K+GK P R+EE+F+ P
Sbjct: 8 VQEYYKDKTIFITGASGFMGKVLLEKLLYSCHSLKEVIIICRPKRGKAPETRLEEMFKLP 67
Query: 84 VFDALKTLRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIK 143
+F +K R + +L+++ + GD+T +LG+S K + +N +IV+H+AAT++ + ++
Sbjct: 68 IFQRIKDERPE-MLKRVTIYQGDVTFDQLGLSGESLKHVTENTNIVFHMAATLKLEGNLR 126
Query: 144 TAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAE 203
A+ +N GTR L ++K+MK L+ F ++STA+C+ + V+ E+ Y P P ++ AE
Sbjct: 127 DAIDMNLLGTRRALNVAKEMKQLEAFIHLSTAFCNCDQDVMYEKVYEFPHKPEDLMRLAE 186
Query: 204 SMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLP 263
M + L+ D+L PN+Y Y+K LAE LV + E MP +I RPSIV P EPLP
Sbjct: 187 WMDVKTLDAITPDLLKPHPNTYTYSKRLAELLVRDHYE-SMPVIIARPSIVTPAVAEPLP 245
Query: 264 GWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTW-DFLNSKESER 322
GW DN+NGPTG+LIGAGKGVIRSM C ++ +P D+AING+ L + + L K +
Sbjct: 246 GWVDNMNGPTGVLIGAGKGVIRSMICNGELKSEVIPVDIAINGLILLPYHNSLAEKRPLQ 305
Query: 323 KSVCNLTSNKDYKITWQEICDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFICCLLFHW 382
V NLT + K TW+ I D+G+D+ K PF LWYP G MT S+ H IC +LF W
Sbjct: 306 IPVYNLTVDDAKKRTWKWIMDVGRDLGI-KYPFEVGLWYPDGNMTSSKFYHTICTILFMW 364
Query: 383 IPAYFLDAVILISGNKPCLVRIQERIHRGFDVFEYYANNEWEFKNGNLHQTRPKRNAREI 442
+PAY +D ++LI G + ++R+Q +I G +V +++ W+FK+ + Q + + +
Sbjct: 365 LPAYLIDFLLLIFGQRRFMIRVQTKIAVGLEVLQFFTTRSWDFKSTHFEQIYKELGSTDR 424
Query: 443 VQYCVENDNVDIVKYFEKAVYGARYFLMKESPESLESARKKMKVMYALHITARCIFLALF 502
+ + D+VD +Y + ++ G R ++MKE SL +R +++ MY L + + ++
Sbjct: 425 RIFKINTDDVDDYEYMKVSILGGRQYVMKEPLTSLPKSRIQLRFMYVLDRICKTMIISGL 484
Query: 503 LWFLSNNFHV 512
L+++S V
Sbjct: 485 LYWVSQKLRV 494
|
|
| FB|FBgn0039131 CG12268 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 885 (316.6 bits), Expect = 1.2e-88, P = 1.2e-88
Identities = 179/511 (35%), Positives = 286/511 (55%)
Query: 24 IAKTYENKSIXXXXXXXXXXKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESP 83
IAK Y NK+I KVL+EK+LR ++ IYLL+RTKKG P+ R E+ F+
Sbjct: 15 IAKFYANKTILITGATGFMGKVLVEKLLRSCADLNVIYLLIRTKKGVDPSVRKEQYFKCV 74
Query: 84 VFDALKTLRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIK 143
+F L + I+ K++V+ GD+ + LG+S D L NV++V+H AA +RFD+P++
Sbjct: 75 IFGKLLE-KNPGIVDKVRVVKGDLLEPDLGLSANDTNTLASNVEVVFHCAANVRFDQPLR 133
Query: 144 TAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAE 203
V++N GT +L L+++M L+ ++ST+YC +E VLEER Y P +P +I E
Sbjct: 134 PMVMMNVVGTLKVLRLAEKMSQLQALVHVSTSYCQCNESVLEERAYPAPQNPFSIIEMVE 193
Query: 204 SMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLP 263
+M +E L +L PN+YAY+K L+E L+ +P +I RPSIV EPLP
Sbjct: 194 TMDDEALAEITPKLLNGLPNTYAYSKALSEDLICRYNNK-LPIIITRPSIVTAAIHEPLP 252
Query: 264 GWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLN-SKESER 322
GW + +NGPTGL+IGA +GVIRSM+C + +P D AING+ L + S+E
Sbjct: 253 GWIEGVNGPTGLMIGAARGVIRSMHCNPDYASTVIPVDKAINGMILCGYQRGKASQEKGN 312
Query: 323 KSV----CNLTSNKDYKITWQEICDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFICCL 378
K CNL + ++W + + G+ + P + LWYPGG++ ++ H C +
Sbjct: 313 KQTGVEFCNLCISSKALMSWGDSIETGRRFFY-ETPLSFALWYPGGSIKKNYYHHLFCVI 371
Query: 379 LFHWIPAYFLDAVILISGNKPCLVRIQERIHRGFDVFEYYANNEWEFKNGNLHQTRPKRN 438
FH++PAYF+D +L+ G KP L+ +Q ++ G + +YY WEF+N + + +
Sbjct: 372 FFHYLPAYFIDFWLLVFGQKPFLLNVQRKVSMGLKLLQYYTTKRWEFRNERFQEMSSQLS 431
Query: 439 AREIVQYCVENDNVDIVKYFEKAVYGARYFLMKESPESLESARKKMKVMYALHITARCIF 498
+ + V+ Y + G R +++ ES ++L ARK ++ +Y L ++ +F
Sbjct: 432 LLDQDLFDTSVGQVNWETYISNYIVGMRTYILGESEDTLPQARKVLRRLYILDWVSKVLF 491
Query: 499 LALFLWFLSNNFHVFLKLG-LFVRGLASLVF 528
+L WFL + F++ F+R S ++
Sbjct: 492 FSLSFWFLWTHLDGFVERSDAFIRSSLSTIY 522
|
|
| FB|FBgn0029821 CG4020 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 848 (303.6 bits), Expect = 1.0e-84, P = 1.0e-84
Identities = 182/486 (37%), Positives = 275/486 (56%)
Query: 24 IAKTYENKSIXXXXXXXXXXKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESP 83
I + +E++ I K LIEK+LR P + +IY+LMR KKG T +R++ +ES
Sbjct: 3 IPEAFEDQEIFVTGASGFVGKALIEKLLRSCPKLGRIYVLMRPKKGHTIEERLQLQWESR 62
Query: 84 VFDALKTLRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIK 143
+++ L+ + + K+ I+GD+ QL LGI D + L NV+IVYH AA++RFD+ +
Sbjct: 63 LYERLRREQPNA-RSKLVAIAGDVEQLGLGIGSADLERL-RNVNIVYHSAASVRFDDALS 120
Query: 144 TAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAE 203
TA++LNTRGT ++++L+ + LK F ++ST Y +P +EER Y P D I AE
Sbjct: 121 TAILLNTRGTHELVKLALEWPKLKAFVHVSTTYSNPGVLEVEERVYPPLADWRTTIKLAE 180
Query: 204 SMKEEDLEVFRQDILGEF-PNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPL 262
+ E L++F G F PN+Y +TK LAE +V E + +P I RPSIVV +EP+
Sbjct: 181 TYDAEILDIFNLKY-GNFQPNTYTFTKSLAEQVVNEYRDR-LPIFIFRPSIVVSTIEEPV 238
Query: 263 PGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322
PGW DN NGPTGLL+ G G++RS C +ADF+PAD+ + + F+ +S
Sbjct: 239 PGWADNFNGPTGLLVACGVGILRSQNCDPNIVADFVPADIVARTLITSVYKFMGESKSRA 298
Query: 323 KS----VCNLTSNKDYKITWQEICDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFICCL 378
K V N + IT E+ DIGK + K PF TLW PGG MT + HF+
Sbjct: 299 KDSDLYVVNCATANISPITMGEVIDIGKTFIR-KNPFEKTLWLPGGGMTTCPVLHFVRFC 357
Query: 379 LFHWIPAYFLDAVILISGNKPCLVRIQERIHRGFDVFEYYANNEWEFKNGNLHQTRPKRN 438
H + A +D ++ + KP L+++Q RI F + +A EW F+N N
Sbjct: 358 TMHLLMAIVVDTLLRLYNEKPFLMKLQRRIFAAFSALQVFAMTEWHFQNDNFRALHDVVP 417
Query: 439 AREIVQY-CVENDNVDIVKYFEKAVYGARYFLMKESPESLESARKKMKVMYALHITARCI 497
A E+ + +++ N++ ++F+ + GA+ FL+KESPES +AR ++K+ Y L R I
Sbjct: 418 ANEVSNFGFMQHANINYTEFFQHGIRGAKEFLLKESPESSSAARFRVKIFYVLDFLCRGI 477
Query: 498 FLALFL 503
+ L
Sbjct: 478 VYSFLL 483
|
|
| FB|FBgn0034145 CG5065 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 841 (301.1 bits), Expect = 5.6e-84, P = 5.6e-84
Identities = 186/490 (37%), Positives = 276/490 (56%)
Query: 24 IAKTYENKSIXXXXXXXXXXKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESP 83
IA+ Y +S+ KVL+EK+LR P ++ IYLL+R K+G+ + R+ EL +P
Sbjct: 119 IAQFYAGRSVFITGGTGFMGKVLVEKLLRSCPEIRNIYLLIRPKRGQEVSARLTELLNAP 178
Query: 84 VFDALKTLRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIK 143
+F++L+ + K L K+ ISGDIT +LGISE D+ L NV +V+H AAT++FDE +K
Sbjct: 179 LFESLRQEKPKE-LSKVIPISGDITSEELGISEKDQNLLCRNVSVVFHSAATVKFDEKLK 237
Query: 144 TAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAE 203
+V +N GT+ ++EL +M +L ++STAYC+ + E Y PP +P +I
Sbjct: 238 LSVTINMLGTKRLVELCHRMLSLDALIHVSTAYCNCDRTDVSEVIYAPPYNPDDIISLIN 297
Query: 204 SMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELG-MPCMILRPSIVVPIYKEPL 262
+ E+ L+ ++G+ PN+Y +TK LAE ++ + E G +P I+RPSIV EP
Sbjct: 298 WLPEDILDQLTPRLIGKRPNTYTFTKALAEHMLLK--EAGNLPVAIVRPSIVTASLNEPF 355
Query: 263 PGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322
GW DN NGPTGL+ KG+ R+M C+ +AD +P D+ IN + W K S
Sbjct: 356 AGWVDNFNGPTGLVSALAKGMFRTMMCEKNYVADMVPVDIVINLMIAAAWRTATRK-SNN 414
Query: 323 KSVCNLTSNKDYKITWQEICDIGKDIVTS--KIPFNSTLWYPGGTMTQSRLTHFICCLLF 380
+ N + + I W E K +TS K P LWYP G + +R + + C+
Sbjct: 415 LLIYNCCTGQRNPIIWSEFV---KHAMTSVRKHPLEGCLWYPTGDLRMNRPMNTLNCIAK 471
Query: 381 HWIPAYFLDAVILISGNKPCLVRIQERIHRGFDVFEYYANNEWEFKNGN----LHQTRPK 436
H++PAY LD V I G KP +V +Q +I + + EY+A +W FK+ N LH PK
Sbjct: 472 HFLPAYILDGVARIMGKKPFVVNVQNKIAKAVECLEYFATRQWRFKDDNVHALLHTLSPK 531
Query: 437 RNAREIVQYCVENDNVDIVKYFEKAVYGARYFLMKESPESLESARKKMKVMYALHITARC 496
REI + V + N D KY E+ V G R FL K+ PESL ++RK+M +Y LH +
Sbjct: 532 D--REIFVFDVRHINWD--KYVERYVLGFREFLFKQRPESLPASRKRMLRLYYLHQLTKL 587
Query: 497 IFLALFLWFL 506
+ + L FL
Sbjct: 588 VAVLLTWRFL 597
|
|
| FB|FBgn0039620 CG1443 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 809 (289.8 bits), Expect = 1.4e-80, P = 1.4e-80
Identities = 161/487 (33%), Positives = 275/487 (56%)
Query: 28 YENKSIXXXXXXXXXXKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDA 87
Y++K + K++IEK+LR+ V +IYLL+RTKKGK R+E+LF PVF
Sbjct: 36 YKDKGVFLTGGTGFFGKIIIEKLLRVT-EVGQIYLLIRTKKGKDAFARIEDLFNDPVFAK 94
Query: 88 LKTLRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVI 147
+K + K Q I +ISGD + LGIS +++ +++NV+IV H AAT+RFDE +K A+
Sbjct: 95 MKQVNPKYRCQ-ITIISGDCSLPGLGISADERETIMENVNIVLHSAATVRFDEKLKMAIA 153
Query: 148 LNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKE 207
+N GT+++++L+K++ NLK ++STA+ H + + ++ER Y +E + E
Sbjct: 154 INVHGTKEIIKLAKEIVNLKALVHVSTAFAHCNMRHIQERFYSGTMSGENAFKLSECLDE 213
Query: 208 EDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPGWTD 267
L I+ +PN+Y +TK LAE +V + + +P I RP IV+ Y+EP+ GW D
Sbjct: 214 HTLNTLTPTIIKGYPNTYTFTKVLAENVVQQSAQ-NLPVTIFRPGIVITTYREPVTGWID 272
Query: 268 NINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCN 327
N+ GP G+++G G GV+R A +P D+ +N + WD +K E + N
Sbjct: 273 NMYGPCGVIVGIGSGVLRVFTGDMDNKAHIVPVDMCVNALLASAWDIARNKY-ETPPIYN 331
Query: 328 LTSNKDYKITWQEICDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFICCLLFHWIPAYF 387
+ + +TW+ + G + IP ++WYP T+ + I C L+H +PA
Sbjct: 332 YVPDAENMVTWRRYMEDGFEYGCD-IPMRKSIWYPRFTIVPHMWQYHILCFLYHTLPALV 390
Query: 388 LDAVILISGNKPCLVRIQERIHRGFDVFEYYANNEWEFKNGNLHQTRPKRNAREIVQYCV 447
+DA+++I G KP +++I +IH+ +V +Y+++NE+ F N N+ + K + R+ +
Sbjct: 391 MDAIMVIIGKKPRMMKIYRKIHKLSNVLKYFSSNEFRFDNDNVRKLTEKLDDRDKRLFAF 450
Query: 448 ENDNVDIVKYFEKAVYGARYFLMKESPESLESARKKMKVMYALHITARCIFLALFLWFLS 507
+ ++D F ++YG R +++K+ P ++ + K+ + + LH T +F AL W L
Sbjct: 451 DMRDLDWTNLFRVSLYGLRLYVVKDDPSNIPESIKRYERLKVLHYTTLAVFYALAAWALY 510
Query: 508 NNFHVFL 514
+FL
Sbjct: 511 ALLKLFL 517
|
|
| FB|FBgn0034142 CG8306 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 769 (275.8 bits), Expect = 2.4e-76, P = 2.4e-76
Identities = 169/481 (35%), Positives = 269/481 (55%)
Query: 24 IAKTYENKSIXXXXXXXXXXKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESP 83
I Y +++ ++EK+LR PNV +YLLMR KKGK+ +R+EEL ++
Sbjct: 6 ITDFYAGRNVFITGATGFVGVTIVEKLLRDVPNVGTLYLLMRAKKGKSVQERLEELKKNS 65
Query: 84 VFDALKTLRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIK 143
VFD K L+ +S L KI I GD+ LGIS D++ LIDNV++V+H AAT+ F + +K
Sbjct: 66 VFDKFKELQLQSRLSKIVPIEGDVGLEHLGISPKDRQTLIDNVNVVFHSAATLDFFQSLK 125
Query: 144 TAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAE 203
+N RGTR ++EL +Q+KNL ++S+AY + +EE+ Y P+DP ++I +E
Sbjct: 126 ETTNINLRGTRRVVELCQQIKNLDALVHVSSAYVNAYLTKVEEKLYPAPEDPEKIIQLSE 185
Query: 204 SMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLP 263
++ ++ L+ +L + PN+Y +TK LAE VA PC I+RPS++ +KEP+P
Sbjct: 186 TLNDDALKELEPKLLKDHPNTYTFTKHLAEHEVANVASK-FPCGIVRPSMITAAWKEPIP 244
Query: 264 GWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNS---KES 320
GWT + NGP G +GA KGV+R + + + D++P DV +NG+ + T ++NS K
Sbjct: 245 GWTISKNGPQGFFMGASKGVLRRLPLDPSIIMDYIPIDVVVNGI-ITTGYYVNSLQAKNG 303
Query: 321 ERKS---VCNLTSNKDYKITWQEICDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFICC 377
R + + +LTS+ YK E+ + P NS +WYP + +S +
Sbjct: 304 GRPADLQIFHLTSST-YKPFRFELMTDKINSYLHDYPLNSAVWYPNLRLVKSLWVFRLSA 362
Query: 378 LLFHWIPAYFLDAVILISGNKPCLVRIQERIHRGFDVFEYYANNEWEFKNGNLHQTRPKR 437
+LFH+IPA LD V I G +P LVR+ + + + E + EW F + L
Sbjct: 363 ILFHFIPAIILDLVTKIGGGRPILVRLHKNVWNSLNTLEKFIFTEWHFDSKRLLALSKTL 422
Query: 438 NAREIVQYCVENDNVDIVKYFEKAVYGARYFLMKESPESLESARKKMKVMYALHITARCI 497
N + ++ ++ + +YF + G R +L KE ++LE AR+K K++ LH+ +
Sbjct: 423 NIVDKKKFFIDIGELAWDEYFSNTILGVRQYLSKEPIKNLEKARRKDKILLGLHVALQLS 482
Query: 498 F 498
F
Sbjct: 483 F 483
|
|
| RGD|1306647 Far1 "fatty acyl CoA reductase 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 741 (265.9 bits), Expect = 2.2e-73, P = 2.2e-73
Identities = 169/519 (32%), Positives = 272/519 (52%)
Query: 24 IAKTYENKSIXXXXXXXXXXKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESP 83
I + YE K+I KVL+EK+LR P V +Y+L+R K G+TP +RVEE+
Sbjct: 4 IPEYYEGKNILLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEILSGK 63
Query: 84 VFDALKTLRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIK 143
+FD L+ QKI I+ ++TQ KL +SE DK+ +ID+ ++++H AAT+RF+E ++
Sbjct: 64 LFDRLRD-ENPDFRQKIIAINSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNENLR 122
Query: 144 TAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAE 203
AV LN TR ++ L++QMKNL+ F ++STAY + + K ++E Y PP DP ++I E
Sbjct: 123 DAVQLNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDSLE 182
Query: 204 SMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVA-ECMELGMPCMILRPSIVVPIYKEPL 262
M + + ++G+ PN+Y YTK LAE +V E +L + I+RPSIV +KEP
Sbjct: 183 WMDDGLVNDITPKLIGDRPNTYIYTKALAEYVVQQEGAKLNVA--IVRPSIVGASWKEPF 240
Query: 263 PGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322
PGW DN NGP+GL I AGKG++R+M N +AD +P DV +N W +
Sbjct: 241 PGWIDNFNGPSGLFIAAGKGILRTMRASNNALADLVPVDVVVNTSLAAAW-YSGVNRPRN 299
Query: 323 KSVCNLTSNKDYKITWQEICD-IGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFICCLLFH 381
V N T+ W E+ D + T+ P N +P + L + H
Sbjct: 300 IMVYNCTTGSTNPFHWGEVGDYLNHSFKTN--PLNQVFRHPYVKFYSNNLMLHYWKGVKH 357
Query: 382 WIPAYFLDAVILISGNKPCLVRIQERIHRGFDVFEYYANNEWEFKNGNLHQTRPKRNARE 441
+PA LD + ++G KP +++ R+H+ EY+ +N W + N++ + N +
Sbjct: 358 TVPALLLDLALRLTGQKPWMMKTITRLHKAMVFLEYFTSNSWVWNTDNVNMLMNQLNPED 417
Query: 442 IVQYCVENDNVDIVKYFEKAVYGARYFLMKESPESLESARKKMKVMYALHITARCIFLAL 501
+ ++ + +Y E G + +++ E L +ARK + + + I L +
Sbjct: 418 KKTFNIDVRQLHWAEYIENYCMGTKKYVLNEEMSGLPAARKHLNKLRNIRYGFNTI-LVI 476
Query: 502 FLW--FLSNNFHVFLKLGLFVRGLASLVFSSSADSTTSR 538
+W F++ + + + FV L S S+T R
Sbjct: 477 LIWRIFIARS-QMARNIWYFVVSLCYKFLSYFRASSTMR 514
|
|
| UNIPROTKB|Q66H50 Far1 "Fatty acyl-CoA reductase 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 741 (265.9 bits), Expect = 2.2e-73, P = 2.2e-73
Identities = 169/519 (32%), Positives = 272/519 (52%)
Query: 24 IAKTYENKSIXXXXXXXXXXKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESP 83
I + YE K+I KVL+EK+LR P V +Y+L+R K G+TP +RVEE+
Sbjct: 4 IPEYYEGKNILLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEILSGK 63
Query: 84 VFDALKTLRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIK 143
+FD L+ QKI I+ ++TQ KL +SE DK+ +ID+ ++++H AAT+RF+E ++
Sbjct: 64 LFDRLRD-ENPDFRQKIIAINSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNENLR 122
Query: 144 TAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAE 203
AV LN TR ++ L++QMKNL+ F ++STAY + + K ++E Y PP DP ++I E
Sbjct: 123 DAVQLNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDSLE 182
Query: 204 SMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVA-ECMELGMPCMILRPSIVVPIYKEPL 262
M + + ++G+ PN+Y YTK LAE +V E +L + I+RPSIV +KEP
Sbjct: 183 WMDDGLVNDITPKLIGDRPNTYIYTKALAEYVVQQEGAKLNVA--IVRPSIVGASWKEPF 240
Query: 263 PGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322
PGW DN NGP+GL I AGKG++R+M N +AD +P DV +N W +
Sbjct: 241 PGWIDNFNGPSGLFIAAGKGILRTMRASNNALADLVPVDVVVNTSLAAAW-YSGVNRPRN 299
Query: 323 KSVCNLTSNKDYKITWQEICD-IGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFICCLLFH 381
V N T+ W E+ D + T+ P N +P + L + H
Sbjct: 300 IMVYNCTTGSTNPFHWGEVGDYLNHSFKTN--PLNQVFRHPYVKFYSNNLMLHYWKGVKH 357
Query: 382 WIPAYFLDAVILISGNKPCLVRIQERIHRGFDVFEYYANNEWEFKNGNLHQTRPKRNARE 441
+PA LD + ++G KP +++ R+H+ EY+ +N W + N++ + N +
Sbjct: 358 TVPALLLDLALRLTGQKPWMMKTITRLHKAMVFLEYFTSNSWVWNTDNVNMLMNQLNPED 417
Query: 442 IVQYCVENDNVDIVKYFEKAVYGARYFLMKESPESLESARKKMKVMYALHITARCIFLAL 501
+ ++ + +Y E G + +++ E L +ARK + + + I L +
Sbjct: 418 KKTFNIDVRQLHWAEYIENYCMGTKKYVLNEEMSGLPAARKHLNKLRNIRYGFNTI-LVI 476
Query: 502 FLW--FLSNNFHVFLKLGLFVRGLASLVFSSSADSTTSR 538
+W F++ + + + FV L S S+T R
Sbjct: 477 LIWRIFIARS-QMARNIWYFVVSLCYKFLSYFRASSTMR 514
|
|
| UNIPROTKB|G8ENM4 FAR1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 738 (264.8 bits), Expect = 4.6e-73, P = 4.6e-73
Identities = 166/518 (32%), Positives = 269/518 (51%)
Query: 24 IAKTYENKSIXXXXXXXXXXKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESP 83
I + YE K+I KVL+EK+LR P V +Y+L+R K G+TP +RVEE
Sbjct: 4 IPEYYEGKNILLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPKERVEEAISGK 63
Query: 84 VFDALKTLRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIK 143
+FD L+ +KI I+ ++TQ KL +SE DKK +ID+ +I++H AAT+RF+E ++
Sbjct: 64 LFDRLRD-ENPDFREKIIAINSELTQPKLALSEEDKKTIIDSTNIIFHCAATVRFNENLR 122
Query: 144 TAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAE 203
AV LN TR ++ L++QMKNL+ F ++STAY + + K ++E Y PP DP ++I E
Sbjct: 123 DAVQLNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPQKLINSLE 182
Query: 204 SMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVA-ECMELGMPCMILRPSIVVPIYKEPL 262
M + + ++G+ PN+Y YTK LAE +V E +L + I+RPSIV +KEP
Sbjct: 183 WMDDGLVNDITPKLIGDRPNTYIYTKALAEYVVQQEGAKLNVA--IVRPSIVGASWKEPF 240
Query: 263 PGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322
PGW DN NGP+GL I AGKG++R+M N +AD +P DV +N W +
Sbjct: 241 PGWIDNFNGPSGLFIAAGKGILRTMRASNNALADLVPVDVVVNTSLAAAW-YSGVNRPRN 299
Query: 323 KSVCNLTSNKDYKITWQEICDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFICCLLFHW 382
V N T+ W E+ + + P P +T + L + + H
Sbjct: 300 IMVYNCTTGSTNPFHWGEV-EYHVISTFKRNPLEQAFRRPNVNLTSNHLLYHYWIAVSHK 358
Query: 383 IPAYFLDAVILISGNKPCLVRIQERIHRGFDVFEYYANNEWEFKNGNLHQTRPKRNAREI 442
PA+ D + ++G P +++ R+H+ + EY+ +N W + N++ + N +
Sbjct: 359 APAFLYDIYLRMTGRSPRMMKTITRLHKAMVLLEYFTSNSWVWSTDNVNMLMNQLNPEDK 418
Query: 443 VQYCVENDNVDIVKYFEKAVYGARYFLMKESPESLESARKKMKVMYALHITARCIFLALF 502
+ ++ + +Y E G + +++ E L +ARK + + + I L +
Sbjct: 419 KTFNIDVRQLHWAEYIENYCMGTKKYVLNEEMSGLPAARKHLNKLRNIRYGFNTI-LVIL 477
Query: 503 LW--FLSNNFHVFLKLGLFVRGLASLVFSSSADSTTSR 538
+W F++ + + + FV L S S+T R
Sbjct: 478 IWRIFIARS-QMARNIWYFVVSLCYKFLSYFRASSTMR 514
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q922J9 | FACR1_MOUSE | 1, ., 2, ., 1, ., n, 2 | 0.3280 | 0.9060 | 0.9553 | yes | N/A |
| Q66H50 | FACR1_RAT | 1, ., 2, ., 1, ., n, 2 | 0.3353 | 0.9097 | 0.9592 | yes | N/A |
| Q8WVX9 | FACR1_HUMAN | 1, ., 2, ., 1, ., n, 2 | 0.3241 | 0.9060 | 0.9553 | yes | N/A |
| Q5R834 | FACR1_PONAB | 1, ., 2, ., 1, ., n, 2 | 0.3222 | 0.9060 | 0.9553 | yes | N/A |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 543 | |||
| cd05236 | 320 | cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F | 1e-111 | |
| pfam07993 | 245 | pfam07993, NAD_binding_4, Male sterility protein | 4e-80 | |
| PLN02996 | 491 | PLN02996, PLN02996, fatty acyl-CoA reductase | 2e-47 | |
| PLN02503 | 605 | PLN02503, PLN02503, fatty acyl-CoA reductase 2 | 1e-40 | |
| cd05235 | 290 | cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | 1e-31 | |
| cd05263 | 293 | cd05263, MupV_like_SDR_e, Pseudomonas fluorescens | 5e-29 | |
| cd09071 | 92 | cd09071, FAR_C, C-terminal domain of fatty acyl Co | 1e-22 | |
| pfam03015 | 94 | pfam03015, Sterile, Male sterility protein | 1e-20 | |
| TIGR01746 | 367 | TIGR01746, Thioester-redct, thioester reductase do | 8e-19 | |
| COG3320 | 382 | COG3320, COG3320, Putative dehydrogenase domain of | 4e-18 | |
| PRK07201 | 657 | PRK07201, PRK07201, short chain dehydrogenase; Pro | 6e-16 | |
| TIGR03443 | 1389 | TIGR03443, alpha_am_amid, L-aminoadipate-semialdeh | 8e-12 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 4e-10 | |
| cd08946 | 200 | cd08946, SDR_e, extended (e) SDRs | 8e-09 | |
| cd09811 | 354 | cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD | 8e-08 | |
| cd05228 | 318 | cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr | 1e-07 | |
| cd05237 | 287 | cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l | 7e-07 | |
| cd05256 | 304 | cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e | 6e-05 | |
| cd05257 | 316 | cd05257, Arna_like_SDR_e, Arna decarboxylase_like, | 6e-05 | |
| COG1086 | 588 | COG1086, COG1086, Predicted nucleoside-diphosphate | 8e-05 | |
| pfam01370 | 233 | pfam01370, Epimerase, NAD dependent epimerase/dehy | 1e-04 | |
| cd05226 | 176 | cd05226, SDR_e_a, Extended (e) and atypical (a) SD | 1e-04 | |
| cd05258 | 337 | cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e | 1e-04 | |
| pfam01073 | 280 | pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr | 2e-04 | |
| cd05252 | 336 | cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydrata | 0.001 | |
| pfam02719 | 280 | pfam02719, Polysacc_synt_2, Polysaccharide biosynt | 0.002 | |
| TIGR02622 | 349 | TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydra | 0.003 | |
| cd09813 | 335 | cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD | 0.003 |
| >gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 333 bits (856), Expect = e-111
Identities = 127/316 (40%), Positives = 189/316 (59%), Gaps = 3/316 (0%)
Query: 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKT 90
KS+ ++G +GFLGKVL+EK+LR P++ KIYLL+R K G++ +R+ EL + +FD +
Sbjct: 1 KSVLITGATGFLGKVLLEKLLRSCPDIGKIYLLIRGKSGQSAEERLRELLKDKLFDRGRN 60
Query: 91 LRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNT 150
L KI I GD+++ LG+S+ D + LI+ V+I+ H AAT+ FDE + A+ +N
Sbjct: 61 LNPLF-ESKIVPIEGDLSEPNLGLSDEDLQTLIEEVNIIIHCAATVTFDERLDEALSINV 119
Query: 151 RGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDL 210
GT +LEL+K+ K LK F ++STAY + +++EE+ Y PP DP ++I E M + +L
Sbjct: 120 LGTLRLLELAKRCKKLKAFVHVSTAYVNGDRQLIEEKVYPPPADPEKLIDILELMDDLEL 179
Query: 211 EVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPGWTDNIN 270
E +LG PN+Y +TK LAE LV + +P +I+RPSIV KEP PGW DN N
Sbjct: 180 ERATPKLLGGHPNTYTFTKALAERLVLKERG-NLPLVIVRPSIVGATLKEPFPGWIDNFN 238
Query: 271 GPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTS 330
GP GL + GKG++R+M +AD +P DV N + K E + V + S
Sbjct: 239 GPDGLFLAYGKGILRTMNADPNAVADIIPVDVVANALLAAAAYSGVRKPRELE-VYHCGS 297
Query: 331 NKDYKITWQEICDIGK 346
+ TW E ++
Sbjct: 298 SDVNPFTWGEAEELIN 313
|
SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320 |
| >gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein | Back alignment and domain information |
|---|
Score = 250 bits (642), Expect = 4e-80
Identities = 102/275 (37%), Positives = 149/275 (54%), Gaps = 32/275 (11%)
Query: 35 LSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRV-EELFESPVFDALKTLRG 93
L+G +GFLGKVL+EK+LR P VK IY L+R K G++ +R+ +EL + +FD LK
Sbjct: 1 LTGATGFLGKVLLEKLLRSTPEVK-IYCLVRAKDGESALERLRQELLKYGLFDRLK---- 55
Query: 94 KSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGT 153
L++I ++GD+++ LG+S+ D +EL + VD++ H AAT+ F EP N GT
Sbjct: 56 --ALERIIPVAGDLSEPNLGLSDEDFQELAEEVDVIIHNAATVNFVEPYSDLRATNVLGT 113
Query: 154 RDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVF 213
R++L L+KQMK F ++STAY + +L + K ++ E
Sbjct: 114 REVLRLAKQMKK-LPFHHVSTAYV---------------NGERGGLLEEKPYKLDEDE-- 155
Query: 214 RQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPGWTDNIN-GP 272
+LG PN Y +K LAE LV E G+P +I RPSI+ E GW + + GP
Sbjct: 156 -PALLGGLPNGYTQSKWLAEQLVREAAG-GLPVVIYRPSIITG---ESRTGWINGDDFGP 210
Query: 273 TGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGV 307
GLL GAG GV+ + D +P D N +
Sbjct: 211 RGLLGGAGLGVLPDILGDPDARLDLVPVDYVANAI 245
|
This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245 |
| >gnl|CDD|215538 PLN02996, PLN02996, fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Score = 172 bits (437), Expect = 2e-47
Identities = 96/310 (30%), Positives = 170/310 (54%), Gaps = 33/310 (10%)
Query: 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRV-EELFESPVFDA 87
ENK+I ++G +GFL K+ +EKILR++PNVKK+YLL+R K+ QR+ +E+ +F
Sbjct: 10 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKV 69
Query: 88 LKTLRGKS----ILQKIQVISGDITQLKLGISEID-KKELIDNVDIVYHVAATIRFDEPI 142
L+ G++ I +K+ + GDI+ LG+ + + ++E+ +DIV ++AAT FDE
Sbjct: 70 LREKLGENLNSLISEKVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERY 129
Query: 143 KTAVILNTRGTRDMLELSKQMKNLKCFTYISTAY-CHPSEKVLEERTY-----------L 190
A+ +NT G ++L +K+ +K ++STAY C ++ E+ + L
Sbjct: 130 DVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKL 189
Query: 191 PPDDPHQVI------LRAESMKEE-------DLEVFRQDILGEFPNSYAYTKCLAEGLVA 237
++ +++ L + EE DL + R + G +PN+Y +TK + E L+
Sbjct: 190 DINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHG-WPNTYVFTKAMGEMLLG 248
Query: 238 ECMELGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADF 297
E +P +I+RP+++ YKEP PGW + + +++G GKG + + D
Sbjct: 249 NFKE-NLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDV 307
Query: 298 LPADVAINGV 307
+PAD+ +N +
Sbjct: 308 IPADMVVNAM 317
|
Length = 491 |
| >gnl|CDD|215279 PLN02503, PLN02503, fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Score = 155 bits (392), Expect = 1e-40
Identities = 93/321 (28%), Positives = 161/321 (50%), Gaps = 43/321 (13%)
Query: 24 IAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVE-ELFES 82
IA+ K+ ++G +GFL KVLIEKILR P+V KIYLL++ K + +R++ E+ ++
Sbjct: 113 IAEFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDA 172
Query: 83 PVFDALKTLRGKS----ILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRF 138
+F L+ GKS +L K+ + G++ + LG+ E+ VD++ + AA F
Sbjct: 173 ELFKCLQETHGKSYQSFMLSKLVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTF 232
Query: 139 DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEK--VLEE---------R 187
DE A+ +NTRG ++ +K+ K LK F +STAY + + ++E+ R
Sbjct: 233 DERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQGRIMEKPFRMGDCIAR 292
Query: 188 TYLPPDDP----------HQVILR-------------AESMKEEDLEVFRQDILGEFPNS 224
+ ++ L A+ MK+ LE R + G + ++
Sbjct: 293 ELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLE--RAKLYG-WQDT 349
Query: 225 YAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVI 284
Y +TK + E +V M +P +I+RPS++ +K+P PGW + +++ GKG +
Sbjct: 350 YVFTKAMGE-MVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQL 408
Query: 285 RSMYCKNTGMADFLPADVAIN 305
G+ D +PAD+ +N
Sbjct: 409 TGFLADPNGVLDVVPADMVVN 429
|
Length = 605 |
| >gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | Back alignment and domain information |
|---|
Score = 123 bits (311), Expect = 1e-31
Identities = 81/318 (25%), Positives = 144/318 (45%), Gaps = 49/318 (15%)
Query: 32 SIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTL 91
++ L+G +GFLG L+ ++L+ NV KIY L+R K + +R+ + + L
Sbjct: 1 TVLLTGATGFLGAYLLRELLK-RKNVSKIYCLVRAKDEEAALERLIDNLKE----YGLNL 55
Query: 92 RGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRF---DEPIKTAVIL 148
+ L +I+V+ GD+++ LG+S+ D +EL + VD++ H A + + E +K A
Sbjct: 56 WDELELSRIKVVVGDLSKPNLGLSDDDYQELAEEVDVIIHNGANVNWVYPYEELKPA--- 112
Query: 149 NTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEE 208
N GT+++L+L+ K LK ++ST +E+ + +
Sbjct: 113 NVLGTKELLKLAATGK-LKPLHFVSTLSVFSAEEYNALDDE----------------ESD 155
Query: 209 DLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPGWTDN 268
D+ + + PN Y +K +AE L+ E G+P I+RP + + G TD+
Sbjct: 156 DMLESQNGL----PNGYIQSKWVAEKLLREAANRGLPVAIIRPGNIFGDSETG-IGNTDD 210
Query: 269 INGPTGLLIGAGKGVIR-SMYCKNTGMADFLPAD-VAINGVFLFTWDFLNSKESERKSVC 326
L+ KG ++ +Y + D P D VA V L ES S+
Sbjct: 211 F---FWRLL---KGCLQLGIYPISGAPLDLSPVDWVARAIV------KLALNESNEFSIY 258
Query: 327 NLTSNKDYKITWQEICDI 344
+L + I+ ++ D
Sbjct: 259 HLLNPP--LISLNDLLDA 274
|
This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290 |
| >gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 115 bits (291), Expect = 5e-29
Identities = 72/244 (29%), Positives = 113/244 (46%), Gaps = 47/244 (19%)
Query: 33 IFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLR 92
+F++GG+GFLG+ L++ RL N K+ +L+R++ ++R+EE
Sbjct: 1 VFVTGGTGFLGRHLVK---RLLENGFKVLVLVRSESLGEAHERIEE-------------- 43
Query: 93 GKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRG 152
+++V+ GD+TQ LG+S +EL VD V H AA+ F P + A N G
Sbjct: 44 AGLEADRVRVLEGDLTQPNLGLSAAASRELAGKVDHVIHCAASYDFQAPNEDAWRTNIDG 103
Query: 153 TRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEV 212
T +LEL+ + +++ F Y+STAY R +++E +L
Sbjct: 104 TEHVLELAAR-LDIQRFHYVSTAYV--------------------AGNREGNIRETELNP 142
Query: 213 FRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPGWTDNINGP 272
+ F N Y +K AE LV +P + RPSIVV K G + I+G
Sbjct: 143 GQ-----NFKNPYEQSKAEAEQLVRAAATQ-IPLTVYRPSIVVGDSKT---GRIEKIDGL 193
Query: 273 TGLL 276
LL
Sbjct: 194 YELL 197
|
This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|176924 cd09071, FAR_C, C-terminal domain of fatty acyl CoA reductases | Back alignment and domain information |
|---|
Score = 91.5 bits (228), Expect = 1e-22
Identities = 28/92 (30%), Positives = 49/92 (53%)
Query: 379 LFHWIPAYFLDAVILISGNKPCLVRIQERIHRGFDVFEYYANNEWEFKNGNLHQTRPKRN 438
H +PAY LD ++ + G KP L+++ +IH+ D+ EY+ NEW F N N + +
Sbjct: 1 FLHLLPAYLLDLLLRLLGRKPRLLKLYRKIHKLLDLLEYFTTNEWRFDNDNTRALWERLS 60
Query: 439 AREIVQYCVENDNVDIVKYFEKAVYGARYFLM 470
+ + + ++D YFE + G R +L+
Sbjct: 61 EEDRELFNFDIRSIDWDDYFENYIPGLRKYLL 92
|
C-terminal domain of fatty acyl CoA reductases, a family of SDR-like proteins. SDRs or short-chain dehydrogenases/reductases are Rossmann-fold NAD(P)H-binding proteins. Many proteins in this FAR_C family may function as fatty acyl-CoA reductases (FARs), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as the biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. The function of this C-terminal domain is unclear. Length = 92 |
| >gnl|CDD|111859 pfam03015, Sterile, Male sterility protein | Back alignment and domain information |
|---|
Score = 86.5 bits (215), Expect = 1e-20
Identities = 33/94 (35%), Positives = 58/94 (61%)
Query: 379 LFHWIPAYFLDAVILISGNKPCLVRIQERIHRGFDVFEYYANNEWEFKNGNLHQTRPKRN 438
+H +PAYFLD ++ + G KP LV++ +IH+G +V + ++ NEW F N N + R K +
Sbjct: 1 FYHTLPAYFLDLLLRLYGQKPRLVKLYRKIHKGLEVLQPFSLNEWIFDNKNTRELREKMS 60
Query: 439 AREIVQYCVENDNVDIVKYFEKAVYGARYFLMKE 472
+ + + +++D +YF A+ G R +L+KE
Sbjct: 61 EEDKKLFNFDMESLDWDEYFRNAIRGIRKYLLKE 94
|
This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 94 |
| >gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain | Back alignment and domain information |
|---|
Score = 87.9 bits (218), Expect = 8e-19
Identities = 57/221 (25%), Positives = 96/221 (43%), Gaps = 31/221 (14%)
Query: 32 SIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTL 91
++ L+G +GFLG L+E++LR K + L+R + +R+ E S L
Sbjct: 1 TVLLTGATGFLGAYLLEELLRRSTQAK-VICLVRAASEEHAMERLREALRS------YRL 53
Query: 92 RGKS-ILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNT 150
+ ++I+V++GD+++ +LG+S+ + + L +NVD + H A + + P N
Sbjct: 54 WHEDLARERIEVVAGDLSEPRLGLSDAEWERLAENVDTIVHNGALVNWVYPYSELRGANV 113
Query: 151 RGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDL 210
GTR++L L+ K Y+ST V ED
Sbjct: 114 LGTREVLRLA-ASGRAKPLHYVSTI------SVGAAIDLSTV--------------TEDD 152
Query: 211 EVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRP 251
YA +K +AE LV E + G+P I+RP
Sbjct: 153 ATVTPPP--GLAGGYAQSKWVAELLVREASDRGLPVTIVRP 191
|
This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367 |
| >gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 85.9 bits (213), Expect = 4e-18
Identities = 56/230 (24%), Positives = 100/230 (43%), Gaps = 37/230 (16%)
Query: 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFE-SPVFDALK 89
+++ L+G +GFLG L+ ++L K+ L+R + + R+E+ F+ +D L
Sbjct: 1 RNVLLTGATGFLGAYLLLELLDRSD--AKVICLVRAQSDEAALARLEKTFDLYRHWDELS 58
Query: 90 TLRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILN 149
+++V++GD+ + LG+SE +EL +NVD++ H AA + P N
Sbjct: 59 A-------DRVEVVAGDLAEPDLGLSERTWQELAENVDLIIHNAALVNHVFPYSELRGAN 111
Query: 150 TRGTRDMLELSKQMKNLKCFTYIST----AYCHPSEKVLEERTYLPPDDPHQVILRAESM 205
GT ++L L+ K K Y+S+ + S ++ P + Q +
Sbjct: 112 VLGTAEVLRLAATGK-PKPLHYVSSISVGETEYYSNFTVDFDEISPTRNVGQGL------ 164
Query: 206 KEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVV 255
Y +K +AE LV E + G+P I RP +
Sbjct: 165 ----------------AGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYIT 198
|
Length = 382 |
| >gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 80.8 bits (200), Expect = 6e-16
Identities = 66/247 (26%), Positives = 110/247 (44%), Gaps = 65/247 (26%)
Query: 34 FLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRG 93
F++GG+GF+G+ L+ ++L +++L+R + R+E L
Sbjct: 4 FVTGGTGFIGRRLVSRLLDRRRE-ATVHVLVR----RQSLSRLEA------------LAA 46
Query: 94 KSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAAT--IRFDEPIKTAVILNTR 151
++ + GD+T+ LG+SE D EL ++D V H+AA + DE + A N
Sbjct: 47 YWGADRVVPLVGDLTEPGLGLSEADIAEL-GDIDHVVHLAAIYDLTADEEAQRAA--NVD 103
Query: 152 GTRDMLELSKQMKNLKCFTYIST---AYCHPSEKVLEERTYLPPDDPHQVILRAESMKEE 208
GTR+++EL+++++ F ++S+ A +
Sbjct: 104 GTRNVVELAERLQA-ATFHHVSSIAVAGDYEG---------------------------- 134
Query: 209 DLEVFRQDILGE---FPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPGW 265
VFR+D E P Y TK AE LV E E G+P + RP++VV + G
Sbjct: 135 ---VFREDDFDEGQGLPTPYHRTKFEAEKLVRE--ECGLPWRVYRPAVVV---GDSRTGE 186
Query: 266 TDNINGP 272
D I+GP
Sbjct: 187 MDKIDGP 193
|
Length = 657 |
| >gnl|CDD|234212 TIGR03443, alpha_am_amid, L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 67.8 bits (166), Expect = 8e-12
Identities = 63/262 (24%), Positives = 118/262 (45%), Gaps = 43/262 (16%)
Query: 7 APDLV-TIPKELQALPDRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPN-VKKIYLLM 64
A LV ++PK + + A T ++FL+G +GFLG ++ +L N K++ +
Sbjct: 949 AKTLVDSLPKSYPSRKELDAST--PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHV 1006
Query: 65 RTKKGKTPNQRVEELFESPVFDALKTLRG---KSILQKIQVISGDITQLKLGISEIDKKE 121
R K+ +E L ++ T G + +I+V+ GD+++ K G+S+ +
Sbjct: 1007 R---AKSEEAGLERLRKT------GTTYGIWDEEWASRIEVVLGDLSKEKFGLSDEKWSD 1057
Query: 122 LIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIST------- 174
L + VD++ H A + + P N GT ++L L + K K F+++S+
Sbjct: 1058 LTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGKA-KQFSFVSSTSALDTE 1116
Query: 175 AYCHPSEKVLEE-RTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAE 233
Y + S+++++ +P D DL + LG Y +K +AE
Sbjct: 1117 YYVNLSDELVQAGGAGIPESD--------------DLMGSSKG-LG---TGYGQSKWVAE 1158
Query: 234 GLVAECMELGMPCMILRPSIVV 255
++ E + G+ I+RP V
Sbjct: 1159 YIIREAGKRGLRGCIVRPGYVT 1180
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. Length = 1389 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 60.7 bits (147), Expect = 4e-10
Identities = 74/375 (19%), Positives = 126/375 (33%), Gaps = 87/375 (23%)
Query: 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKT 90
I ++GG+GF+G L+E++L +V+ D L+
Sbjct: 1 MRILVTGGAGFIGSHLVERLLAAGHDVR-------------------------GLDRLRD 35
Query: 91 LRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAA----TIRFDEPIKTAV 146
+ V+ D+T ++ + D V H+AA +
Sbjct: 36 GLDPLLSGVEFVV-LDLTDR-----DLVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFL 89
Query: 147 ILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMK 206
+N GT ++LE ++ +K F + S+ + D P I
Sbjct: 90 DVNVDGTLNLLEAARAA-GVKRFVFASSVSV------------VYGDPPPLPI------D 130
Query: 207 EEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMEL-GMPCMILRPSIVVPIYKEPLPGW 265
E+ N Y +K AE L+ L G+P +ILRP V PG
Sbjct: 131 EDLGPP-------RPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYG------PGD 177
Query: 266 TDNING--PTGLLIGAGKGV-IRSMYCKNTGMADFL-PADVAINGVFLFTWDFLNSKESE 321
+++ + + KG I + + DF+ DVA L E+
Sbjct: 178 KPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVA--DALLLAL------ENP 229
Query: 322 RKSVCNLTSNKDYKITWQEICDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFICCLLFH 381
V N+ S +IT +E+ + + V SK P ++ P G R +
Sbjct: 230 DGGVFNIGSG-TAEITVRELAEAVAEAVGSKAPL--IVYIPLGRRGDLREGKLLDISKAR 286
Query: 382 ----WIPAYFLDAVI 392
W P L+ +
Sbjct: 287 AALGWEPKVSLEEGL 301
|
Length = 314 |
| >gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 55.4 bits (134), Expect = 8e-09
Identities = 42/198 (21%), Positives = 64/198 (32%), Gaps = 51/198 (25%)
Query: 123 IDNVDIVYHVAATIRFDEPIKTAVIL---NTRGTRDMLELSKQMKNLKCFTYISTA--YC 177
ID +D+V H+AA + N GT ++LE +++ +K F Y S+A Y
Sbjct: 28 IDRLDVVVHLAALVGVPASWDNPDEDFETNVVGTLNLLEAARKA-GVKRFVYASSASVYG 86
Query: 178 HPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVA 237
P EE T P P Y +K AE L+
Sbjct: 87 SPEGLPEEEETPPRPLSP-----------------------------YGVSKLAAEHLLR 117
Query: 238 E-CMELGMPCMILRPSIVV-----PIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKN 291
G+P +ILR + V P + + L + G R
Sbjct: 118 SYGESYGLPVVILRLANVYGPGQRPRLDGVVNDFIRRALEGKPLTVFGGGNQTR------ 171
Query: 292 TGMADFLPADVAINGVFL 309
DF+ D + +
Sbjct: 172 ----DFIHVDDVVRAILH 185
|
Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200 |
| >gnl|CDD|187671 cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD (hydroxysteroid dehydrogenase) and HSD3B1(delta 5-delta 4-isomerase)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 54.0 bits (130), Expect = 8e-08
Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 25/145 (17%)
Query: 32 SIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTL 91
++GG GFLG+ +I +L + +K+I +L K + E FE
Sbjct: 1 VCLVTGGGGFLGQHIIRLLLERKEELKEIRVL-----DKAFGPELIEHFE--------KS 47
Query: 92 RGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVI--LN 149
+GK+ + I GDI L S + V +V H AA + P + +N
Sbjct: 48 QGKT---YVTDIEGDIKDL----SFL--FRACQGVSVVIHTAAIVDVFGPPNYEELEEVN 98
Query: 150 TRGTRDMLELSKQMKNLKCFTYIST 174
GT+ +LE Q N+K Y S+
Sbjct: 99 VNGTQAVLEACVQ-NNVKRLVYTSS 122
|
This extended-SDR subgroup includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7], and related proteins. These proteins have the characteristic active site tetrad and NAD(P)-binding motif of extended SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. C(27) 3beta-HSD is a membrane-bound enzyme of the endoplasmic reticulum, it catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 354 |
| >gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 53.4 bits (129), Expect = 1e-07
Identities = 50/229 (21%), Positives = 80/229 (34%), Gaps = 67/229 (29%)
Query: 33 IFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLR 92
I ++G +GFLG L+ +L V+ L+R L PV
Sbjct: 1 ILVTGATGFLGSNLVRALLAQGYRVR---ALVR------SGSDAVLLDGLPV-------- 43
Query: 93 GKSILQKIQVISGDITQLKLGISEIDKKELID---NVDIVYHVAATIRFDEPIKTAVI-L 148
+V+ GD+T D L D V+H+AA + +
Sbjct: 44 --------EVVEGDLT---------DAASLAAAMKGCDRVFHLAAFTSLWAKDRKELYRT 86
Query: 149 NTRGTRDMLELSKQMKNLKCFTYIST--AYCHPSEKVLEERTYLPPDDPHQVILRAESMK 206
N GTR++L+ + + ++ + S+ A P + ++E T
Sbjct: 87 NVEGTRNVLDAALE-AGVRRVVHTSSIAALGGPPDGRIDETTPWNER------------- 132
Query: 207 EEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVV 255
FPN Y +K LAE V E G+ +I+ PS V
Sbjct: 133 -------------PFPNDYYRSKLLAELEVLEAAAEGLDVVIVNPSAVF 168
|
This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318 |
| >gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 50.7 bits (122), Expect = 7e-07
Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 32/153 (20%)
Query: 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDAL 88
+ K+I ++GG+G +G L+ +IL+ P KK+ + R E+ + + +
Sbjct: 1 KGKTILVTGGAGSIGSELVRQILKFGP--KKLIVFDRD--------------ENKLHELV 44
Query: 89 KTLRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAAT--IR-----FDEP 141
+ LR + K++ I GD+ + + K+ DIV+H AA + +E
Sbjct: 45 RELRSRFPHDKLRFIIGDVRDKER-LRRAFKER---GPDIVFHAAALKHVPSMEDNPEEA 100
Query: 142 IKTAVILNTRGTRDMLELSKQMKNLKCFTYIST 174
IKT V+ GT+++++ + + ++ F IST
Sbjct: 101 IKTNVL----GTKNVIDAAIE-NGVEKFVCIST 128
|
UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287 |
| >gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 44.9 bits (107), Expect = 6e-05
Identities = 41/171 (23%), Positives = 70/171 (40%), Gaps = 42/171 (24%)
Query: 37 GGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSI 96
GG+GF+G L+E++L V V D L T + +++
Sbjct: 6 GGAGFIGSHLVERLLER-------------------GHEVI------VLDNLSTGKKENL 40
Query: 97 ---LQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAA----TIRFDEPIKTAVILN 149
++ I GDI +L + + VD V+H AA ++PIK + N
Sbjct: 41 PEVKPNVKFIEGDIRDDEL------VEFAFEGVDYVFHQAAQASVPRSIEDPIKDHEV-N 93
Query: 150 TRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVL--EERTYLPPDDPHQV 198
GT ++LE +++ +K F Y S++ + L +E P P+ V
Sbjct: 94 VLGTLNLLEAARK-AGVKRFVYASSSSVYGDPPYLPKDEDHPPNPLSPYAV 143
|
This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304 |
| >gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 6e-05
Identities = 47/224 (20%), Positives = 79/224 (35%), Gaps = 54/224 (24%)
Query: 32 SIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTL 91
++ ++G GF+G L E++LR V+ + + N L
Sbjct: 1 NVLVTGADGFIGSHLTERLLREGHEVRALDIY---------NSFNSWG-----------L 40
Query: 92 RGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIK---TAVIL 148
++ + ISGD+ L+ D+V+H+AA I + V
Sbjct: 41 LDNAVHDRFHFISGDVRDASEVE------YLVKKCDVVFHLAALIAIPYSYTAPLSYVET 94
Query: 149 NTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEE 208
N GT ++LE + K + ST SE V +P D+ H +
Sbjct: 95 NVFGTLNVLEAACV-LYRKRVVHTST-----SE-VYGTAQDVPIDEDHPL---------- 137
Query: 209 DLEVFRQDILGEFPNSYAYTKCLAEGLV-AECMELGMPCMILRP 251
P Y+ +K A+ L + G+P I+RP
Sbjct: 138 -----LYINKPRSP--YSASKQGADRLAYSYGRSFGLPVTIIRP 174
|
Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316 |
| >gnl|CDD|224011 COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 8e-05
Identities = 42/164 (25%), Positives = 67/164 (40%), Gaps = 42/164 (25%)
Query: 23 RIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFES 82
I K++ ++GG G +G L +IL+ P K+I L R E
Sbjct: 243 LIGAMLTGKTVLVTGGGGSIGSELCRQILKFNP--KEIILFSRD--------------EY 286
Query: 83 PVFDALKTLRGKSILQKIQVISGDITQLKLGISEIDKKELID-----NVDIVYHVAA--- 134
++ LR K K++ GD+ D+ + VDIV+H AA
Sbjct: 287 KLYLIDMELREKFPELKLRFYIGDVR---------DRDRVERAMEGHKVDIVFHAAALKH 337
Query: 135 --TIRF--DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIST 174
+ + +E IKT V+ GT ++ E + + +K F IST
Sbjct: 338 VPLVEYNPEEAIKTNVL----GTENVAEAAIKNG-VKKFVLIST 376
|
Length = 588 |
| >gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 1e-04
Identities = 44/227 (19%), Positives = 73/227 (32%), Gaps = 68/227 (29%)
Query: 33 IFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLR 92
I ++GG+GF+G L+ ++L+ V + + F
Sbjct: 1 ILVTGGTGFIGSHLVRRLLQEGYEVIVLG---------RRRRSESLNTGRIRF------- 44
Query: 93 GKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIR----FDEPIKTAVIL 148
GD+T +++ D V H+AA F++P
Sbjct: 45 ----------HEGDLT----DPDALERLLAEVQPDAVIHLAAQSGVGASFEDPADFIRA- 89
Query: 149 NTRGTRDMLELSKQMKNLKCFTYISTA--YCHPSEKVLEERTYLPPDDPHQVILRAESMK 206
N GT +LE +++ +K F + S++ Y D I
Sbjct: 90 NVLGTLRLLEAARRA-GVKRFVFASSSEVY---------------GDVADPPI------T 127
Query: 207 EEDLEVFRQDILGEFPNSYAYTKCLAEGLV-AECMELGMPCMILRPS 252
E+ + YA K AE LV A G+ +ILR
Sbjct: 128 EDTPLGPL--------SPYAAAKLAAERLVEAYARAYGLRAVILRLF 166
|
This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233 |
| >gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 1e-04
Identities = 38/171 (22%), Positives = 68/171 (39%), Gaps = 37/171 (21%)
Query: 33 IFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLR 92
I + G +GF+G+ L ++L ++ LL+R +R+ + + PV
Sbjct: 1 ILILGATGFIGRALARELLEQ---GHEVTLLVRNT------KRLSKEDQEPV-------- 43
Query: 93 GKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRG 152
V+ GD+ L + + VD+V H+A R ++ G
Sbjct: 44 --------AVVEGDLRDLD------SLSDAVQGVDVVIHLAGAPRDTRDFCE---VDVEG 86
Query: 153 TRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAE 203
TR++LE +K+ +K F +IS+ + EE P V + E
Sbjct: 87 TRNVLEAAKEA-GVKHFIFISSLGAYGDLH--EETEPSPSSPYLAVKAKTE 134
|
Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176 |
| >gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 43.8 bits (104), Expect = 1e-04
Identities = 49/235 (20%), Positives = 84/235 (35%), Gaps = 46/235 (19%)
Query: 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKT 90
+ ++GG+GF+G L L+ V LMR +G F L
Sbjct: 1 MRVLITGGAGFIGSNLARFFLKQGWEVIGFDNLMR--RG--------------SFGNLAW 44
Query: 91 LRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAA----TIRFDEPIKTAV 146
L+ ++ + GDI D ++L +++D++ H AA T P +
Sbjct: 45 LKANREDGGVRFVHGDIRNRN------DLEDLFEDIDLIIHTAAQPSVTTSASSP-RLDF 97
Query: 147 ILNTRGTRDMLELSKQMKNLKCFTYISTAYCHP----SEKVLEERTYLPPDDPHQVILRA 202
N GT ++LE ++Q F + ST + + E T
Sbjct: 98 ETNALGTLNVLEAARQHAPNAPFIFTSTNKVYGDLPNYLPLEELETRYELAPEG------ 151
Query: 203 ESMKEEDL-EVFRQDILGEFPNS-YAYTKCLAEGLVAECMEL-GMPCMILRPSIV 254
+ E F D F +S Y +K A+ V E + G+ ++ R +
Sbjct: 152 --WSPAGISESFPLD----FSHSLYGASKGAADQYVQEYGRIFGLKTVVFRCGCL 200
|
CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337 |
| >gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 2e-04
Identities = 53/210 (25%), Positives = 84/210 (40%), Gaps = 66/210 (31%)
Query: 37 GGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSI 96
GG GFLG+ ++ +LR ++++ RV +L SP + L S
Sbjct: 4 GGGGFLGRHIVRLLLREGE-LQEV--------------RVFDLRFSP-----ELLEDFSK 43
Query: 97 LQKIQVISGDITQLKLGISEIDKKEL---IDNVDIVYHVAATI------RFDEPIKTAVI 147
LQ I I GD+T DK++L + D+V H AA I D +K
Sbjct: 44 LQVITYIEGDVT---------DKQDLRRALQGSDVVIHTAAIIDVFGKAYRDTIMK---- 90
Query: 148 LNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRA-ESMK 206
+N +GT+++L+ + ++ Y S+ E V P+ Q I+ E+
Sbjct: 91 VNVKGTQNVLDACVKA-GVRVLVYTSSM-----EVVG-------PNSYGQPIVNGDETTP 137
Query: 207 EEDLEVFRQDILGEFPNSYAYTKCLAEGLV 236
E + Y +K LAE LV
Sbjct: 138 YEST----------HQDPYPESKALAEKLV 157
|
The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280 |
| >gnl|CDD|187562 cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 0.001
Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 35/158 (22%)
Query: 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDA 87
++ K + ++G +GF G L + L V L T PN LFE
Sbjct: 2 WQGKRVLVTGHTGFKGSWLSLWLQELGAKVIGYSLDPPTN----PN-----LFEL----- 47
Query: 88 LKTLRGKSILQKIQVISGDI---TQLKLGISEIDKKELIDNVDIVYHVAAT--IR--FDE 140
++ KI GDI L+ I E + +IV+H+AA +R + +
Sbjct: 48 ------ANLDNKISSTRGDIRDLNALREAIREYEP-------EIVFHLAAQPLVRLSYKD 94
Query: 141 PIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCH 178
P++T N GT ++LE ++ ++K +++ C+
Sbjct: 95 PVETFET-NVMGTVNLLEAIRETGSVKAVVNVTSDKCY 131
|
This subgroup contains CDP-D-glucose 4,6-dehydratase, an extended SDR, which catalyzes the conversion of CDP-D-glucose to CDP-4-keto-6-deoxy-D-glucose. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 336 |
| >gnl|CDD|217199 pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein | Back alignment and domain information |
|---|
Score = 39.8 bits (94), Expect = 0.002
Identities = 37/149 (24%), Positives = 65/149 (43%), Gaps = 32/149 (21%)
Query: 33 IFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLR 92
+ ++GG G +G L +IL+ P KKI L R E +++ + LR
Sbjct: 1 VLVTGGGGSIGSELCRQILKFNP--KKIILFSRD--------------EFKLYEIRQELR 44
Query: 93 GKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAA-----TIRFD--EPIKTA 145
+ K++ GD+ + +++ VD V+H AA + ++ E IKT
Sbjct: 45 QEYNDPKLRFFIGDVRDRERLERAMEQHG----VDTVFHAAALKHVPLVEYNPMEAIKT- 99
Query: 146 VILNTRGTRDMLELSKQMKNLKCFTYIST 174
N GT ++ E + + ++ F IST
Sbjct: 100 ---NVLGTENVAEAAIEN-GVEKFVLIST 124
|
This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI). Length = 280 |
| >gnl|CDD|233954 TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.003
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 35/158 (22%)
Query: 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDA 87
++ K + ++G +GF G L +L L V L T PN +F+
Sbjct: 2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTS----PN----------LFEL 47
Query: 88 LKTLRGKSILQKIQVISGDIT-QLKLGISEIDKKELIDNV--DIVYHVAA----TIRFDE 140
L + +KI+ GDI KL ++ I +IV+H+AA + +
Sbjct: 48 LN------LAKKIEDHFGDIRDAAKL-------RKAIAEFKPEIVFHLAAQPLVRKSYAD 94
Query: 141 PIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCH 178
P++T N GT ++LE + + ++K +++ C+
Sbjct: 95 PLETFET-NVMGTVNLLEAIRAIGSVKAVVNVTSDKCY 131
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 349 |
| >gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.003
Identities = 73/305 (23%), Positives = 119/305 (39%), Gaps = 75/305 (24%)
Query: 32 SIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTL 91
S + GGSGFLG+ L+E++LR P V ++ P F+ +
Sbjct: 1 SCLVVGGSGFLGRHLVEQLLRRG----------------NPTVHVFDIR--PTFELDPSS 42
Query: 92 RGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATI-RFDEPIKTAVILNT 150
G ++Q +GD+T +++K ++V+H A+ ++ + V N
Sbjct: 43 SG-----RVQFHTGDLTDP----QDLEKAFNEKGPNVVFHTASPDHGSNDDLYYKV--NV 91
Query: 151 RGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDL 210
+GTR+++E ++ +K Y S+A V+ + + D
Sbjct: 92 QGTRNVIEACRK-CGVKKLVYTSSA---------------------SVVFNGQDIINGD- 128
Query: 211 EVFRQDILGEFPNSYAYTKCLAEGLV--AECMELGMPCMILRPSIVV-PIYKEPLPGWTD 267
E + ++Y TK LAE LV A E G+ LRP+ + P ++ +PG
Sbjct: 129 E--SLPYPDKHQDAYNETKALAEKLVLKANDPESGLLTCALRPAGIFGPGDRQLVPGLLK 186
Query: 268 NI-NGPTGLLIGAGKGVIRSMYCKNTGMADFLPAD--------VAING-VFLFT------ 311
NG T IG G + Y +N A L AD + G F T
Sbjct: 187 AAKNGKTKFQIGDGNNLFDFTYVENVAHAHILAADALLSSSHAETVAGEAFFITNDEPIY 246
Query: 312 -WDFL 315
WDF
Sbjct: 247 FWDFA 251
|
This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 543 | |||
| KOG1221|consensus | 467 | 100.0 | ||
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 100.0 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 100.0 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 100.0 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 100.0 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 100.0 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 100.0 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 100.0 | |
| KOG1502|consensus | 327 | 100.0 | ||
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 100.0 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 100.0 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 100.0 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 100.0 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 100.0 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 100.0 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 100.0 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 100.0 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 100.0 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 100.0 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 100.0 | |
| KOG0747|consensus | 331 | 100.0 | ||
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 100.0 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 100.0 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 100.0 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 100.0 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 100.0 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 100.0 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 100.0 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 100.0 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.98 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.97 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.97 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.97 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.97 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.97 | |
| KOG1429|consensus | 350 | 99.97 | ||
| KOG1430|consensus | 361 | 99.97 | ||
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.97 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.97 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.97 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.97 | |
| KOG1371|consensus | 343 | 99.97 | ||
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.97 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.97 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.96 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.96 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.96 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.96 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.96 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.95 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.95 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.95 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.94 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.94 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.94 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.94 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.93 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.93 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.93 | |
| PF03015 | 94 | Sterile: Male sterility protein; InterPro: IPR0042 | 99.91 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.89 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.89 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.87 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.86 | |
| KOG1431|consensus | 315 | 99.86 | ||
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.86 | |
| cd09071 | 92 | FAR_C C-terminal domain of fatty acyl CoA reductas | 99.85 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.85 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.84 | |
| KOG2865|consensus | 391 | 99.84 | ||
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.83 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.81 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.81 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.8 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.8 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.79 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.79 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.78 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.77 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.76 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.75 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.74 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.74 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.74 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.73 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.73 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.73 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.73 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.72 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.72 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.72 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.72 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.71 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 99.7 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.7 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.7 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.7 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.68 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.68 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.68 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.67 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.67 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.66 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.66 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.66 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.66 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.65 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.65 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.65 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.65 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.65 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.64 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.64 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.64 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.63 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 99.63 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.63 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.62 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.62 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.62 | |
| KOG1372|consensus | 376 | 99.62 | ||
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.62 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.61 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.61 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.61 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.6 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.6 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.59 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.59 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.59 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.59 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.58 | |
| KOG2774|consensus | 366 | 99.58 | ||
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.58 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.58 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.57 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.57 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.56 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.55 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.55 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.54 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.54 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.53 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.53 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.53 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.53 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.52 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.52 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 99.51 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.51 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.51 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.51 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 99.5 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 99.5 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.5 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.49 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 99.49 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 99.49 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.48 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.48 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.47 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.47 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.47 | |
| KOG4039|consensus | 238 | 99.47 | ||
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 99.47 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 99.46 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.45 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.45 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.44 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.43 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.43 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.43 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 99.43 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 99.43 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 99.43 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 99.42 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 99.42 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.41 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.4 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.4 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.4 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.39 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 99.39 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.38 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 99.38 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 99.36 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.35 | |
| KOG1205|consensus | 282 | 99.35 | ||
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 99.35 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.34 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.34 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.31 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.31 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.3 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 99.29 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.29 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.28 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 99.28 | |
| KOG1203|consensus | 411 | 99.26 | ||
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 99.25 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.25 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 99.25 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 99.24 | |
| KOG4288|consensus | 283 | 99.24 | ||
| KOG1201|consensus | 300 | 99.21 | ||
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 99.21 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 99.19 | |
| PLN00015 | 308 | protochlorophyllide reductase | 99.13 | |
| KOG1200|consensus | 256 | 99.07 | ||
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 99.06 | |
| KOG3019|consensus | 315 | 99.04 | ||
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 99.02 | |
| KOG1208|consensus | 314 | 99.01 | ||
| KOG1610|consensus | 322 | 99.0 | ||
| KOG4169|consensus | 261 | 99.0 | ||
| KOG0725|consensus | 270 | 98.97 | ||
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 98.94 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 98.94 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 98.92 | |
| KOG1611|consensus | 249 | 98.88 | ||
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 98.84 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 98.75 | |
| KOG1210|consensus | 331 | 98.73 | ||
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.69 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 98.68 | |
| PLN00106 | 323 | malate dehydrogenase | 98.65 | |
| KOG1209|consensus | 289 | 98.64 | ||
| KOG1207|consensus | 245 | 98.55 | ||
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 98.42 | |
| KOG1014|consensus | 312 | 98.39 | ||
| PRK09620 | 229 | hypothetical protein; Provisional | 98.38 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 98.35 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 98.32 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 98.15 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 98.09 | |
| KOG1204|consensus | 253 | 98.0 | ||
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 97.97 | |
| KOG1199|consensus | 260 | 97.96 | ||
| PRK05086 | 312 | malate dehydrogenase; Provisional | 97.89 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 97.79 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 97.78 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 97.69 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 97.66 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 97.63 | |
| KOG2733|consensus | 423 | 97.58 | ||
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 97.52 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 97.49 | |
| KOG1478|consensus | 341 | 97.45 | ||
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 97.45 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 97.42 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 97.36 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 97.35 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 97.34 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 97.21 | |
| KOG1202|consensus | 2376 | 97.11 | ||
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 97.04 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 96.94 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 96.81 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 96.74 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 96.67 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 96.67 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 96.57 | |
| TIGR01850 | 346 | argC N-acetyl-gamma-glutamyl-phosphate reductase, | 96.57 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 96.51 | |
| PRK00436 | 343 | argC N-acetyl-gamma-glutamyl-phosphate reductase; | 96.5 | |
| PRK08664 | 349 | aspartate-semialdehyde dehydrogenase; Reviewed | 96.49 | |
| PRK05671 | 336 | aspartate-semialdehyde dehydrogenase; Reviewed | 96.47 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 96.46 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 96.45 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 96.38 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.37 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 96.21 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 96.17 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 96.16 | |
| cd05295 | 452 | MDH_like Malate dehydrogenase-like. These MDH-like | 96.09 | |
| PRK13982 | 475 | bifunctional SbtC-like/phosphopantothenoylcysteine | 95.98 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 95.82 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 95.7 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 95.67 | |
| COG4982 | 866 | 3-oxoacyl-[acyl-carrier protein] | 95.66 | |
| PRK00048 | 257 | dihydrodipicolinate reductase; Provisional | 95.62 | |
| TIGR01772 | 312 | MDH_euk_gproteo malate dehydrogenase, NAD-dependen | 95.62 | |
| TIGR01296 | 339 | asd_B aspartate-semialdehyde dehydrogenase (peptid | 95.52 | |
| COG0002 | 349 | ArgC Acetylglutamate semialdehyde dehydrogenase [A | 95.52 | |
| PRK08223 | 287 | hypothetical protein; Validated | 95.5 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 95.47 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 95.28 | |
| COG0039 | 313 | Mdh Malate/lactate dehydrogenases [Energy producti | 95.24 | |
| PLN00112 | 444 | malate dehydrogenase (NADP); Provisional | 95.17 | |
| PLN02383 | 344 | aspartate semialdehyde dehydrogenase | 95.14 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 95.08 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 95.06 | |
| KOG1494|consensus | 345 | 95.05 | ||
| PLN02602 | 350 | lactate dehydrogenase | 95.0 | |
| TIGR01757 | 387 | Malate-DH_plant malate dehydrogenase, NADP-depende | 94.97 | |
| cd05290 | 307 | LDH_3 A subgroup of L-lactate dehydrogenases. L-la | 94.94 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 94.9 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 94.86 | |
| PTZ00117 | 319 | malate dehydrogenase; Provisional | 94.77 | |
| cd05292 | 308 | LDH_2 A subgroup of L-lactate dehydrogenases. L-la | 94.76 | |
| cd05293 | 312 | LDH_1 A subgroup of L-lactate dehydrogenases. L-la | 94.72 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 94.7 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 94.67 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 94.62 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 94.57 | |
| TIGR01851 | 310 | argC_other N-acetyl-gamma-glutamyl-phosphate reduc | 94.55 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 94.54 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 94.41 | |
| cd00650 | 263 | LDH_MDH_like NAD-dependent, lactate dehydrogenase- | 94.38 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 94.34 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 94.24 | |
| COG0136 | 334 | Asd Aspartate-semialdehyde dehydrogenase [Amino ac | 94.21 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 94.09 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 94.07 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 93.97 | |
| PRK08040 | 336 | putative semialdehyde dehydrogenase; Provisional | 93.96 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 93.86 | |
| PRK07877 | 722 | hypothetical protein; Provisional | 93.72 | |
| PRK06223 | 307 | malate dehydrogenase; Reviewed | 93.42 | |
| PRK11863 | 313 | N-acetyl-gamma-glutamyl-phosphate reductase; Provi | 93.38 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 93.35 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 93.01 | |
| PRK06728 | 347 | aspartate-semialdehyde dehydrogenase; Provisional | 92.99 | |
| PTZ00082 | 321 | L-lactate dehydrogenase; Provisional | 92.9 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 92.86 | |
| TIGR01745 | 366 | asd_gamma aspartate-semialdehyde dehydrogenase, ga | 92.82 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 92.59 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 92.44 | |
| KOG4022|consensus | 236 | 92.36 | ||
| PRK07878 | 392 | molybdopterin biosynthesis-like protein MoeZ; Vali | 92.33 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 91.81 | |
| COG0289 | 266 | DapB Dihydrodipicolinate reductase [Amino acid tra | 91.81 | |
| KOG1496|consensus | 332 | 91.74 | ||
| PRK06598 | 369 | aspartate-semialdehyde dehydrogenase; Reviewed | 91.74 | |
| TIGR01763 | 305 | MalateDH_bact malate dehydrogenase, NAD-dependent. | 91.67 | |
| PRK01710 | 458 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 91.64 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 91.62 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 91.62 | |
| PTZ00374 | 1108 | dihydroxyacetone phosphate acyltransferase; Provis | 91.61 | |
| PRK14852 | 989 | hypothetical protein; Provisional | 91.43 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 91.43 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 91.35 | |
| TIGR03693 | 637 | ocin_ThiF_like putative thiazole-containing bacter | 91.32 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 91.0 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 90.93 | |
| PF02882 | 160 | THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl | 90.79 | |
| KOG0172|consensus | 445 | 90.72 | ||
| PRK14188 | 296 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 90.67 | |
| PF02670 | 129 | DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re | 90.63 | |
| cd00300 | 300 | LDH_like L-lactate dehydrogenase-like enzymes. Mem | 90.62 | |
| PRK14851 | 679 | hypothetical protein; Provisional | 90.6 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 90.4 | |
| PRK06153 | 393 | hypothetical protein; Provisional | 90.33 | |
| PRK07411 | 390 | hypothetical protein; Validated | 89.88 | |
| PRK13243 | 333 | glyoxylate reductase; Reviewed | 89.68 | |
| PRK06901 | 322 | aspartate-semialdehyde dehydrogenase; Provisional | 89.1 | |
| smart00859 | 122 | Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin | 89.09 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 88.96 | |
| cd01339 | 300 | LDH-like_MDH L-lactate dehydrogenase-like malate d | 88.94 | |
| PRK11199 | 374 | tyrA bifunctional chorismate mutase/prephenate deh | 88.93 | |
| TIGR00978 | 341 | asd_EA aspartate-semialdehyde dehydrogenase (non-p | 88.92 | |
| TIGR01771 | 299 | L-LDH-NAD L-lactate dehydrogenase. This model repr | 88.75 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 88.73 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 88.58 | |
| PRK14189 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 88.52 | |
| KOG0023|consensus | 360 | 88.32 | ||
| PRK06019 | 372 | phosphoribosylaminoimidazole carboxylase ATPase su | 88.29 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 88.18 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 88.17 | |
| KOG1198|consensus | 347 | 88.17 | ||
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 88.11 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 88.08 | |
| PRK14179 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 88.03 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 87.75 | |
| cd05212 | 140 | NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom | 87.67 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 87.55 | |
| cd01489 | 312 | Uba2_SUMO Ubiquitin activating enzyme (E1) subunit | 87.34 | |
| PRK10792 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 87.31 | |
| PRK13304 | 265 | L-aspartate dehydrogenase; Reviewed | 87.23 | |
| TIGR00036 | 266 | dapB dihydrodipicolinate reductase. | 87.15 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 87.03 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 86.95 | |
| TIGR01408 | 1008 | Ube1 ubiquitin-activating enzyme E1. This model re | 86.84 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 86.67 | |
| PF12683 | 275 | DUF3798: Protein of unknown function (DUF3798); In | 86.49 | |
| PF08732 | 410 | HIM1: HIM1; InterPro: IPR014843 HIM1 (high inducti | 86.26 | |
| PRK07634 | 245 | pyrroline-5-carboxylate reductase; Reviewed | 86.24 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 86.22 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 86.12 | |
| PRK07819 | 286 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 86.08 | |
| PRK08057 | 248 | cobalt-precorrin-6x reductase; Reviewed | 86.01 | |
| PRK06719 | 157 | precorrin-2 dehydrogenase; Validated | 85.83 | |
| PRK04308 | 445 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 85.62 | |
| PRK14176 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 85.58 | |
| TIGR02717 | 447 | AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP | 85.37 | |
| PF01408 | 120 | GFO_IDH_MocA: Oxidoreductase family, NAD-binding R | 85.31 | |
| PLN02353 | 473 | probable UDP-glucose 6-dehydrogenase | 85.14 | |
| cd01484 | 234 | E1-2_like Ubiquitin activating enzyme (E1), repeat | 85.09 | |
| PRK14180 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 84.96 | |
| PRK14173 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 84.93 | |
| PRK14191 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 84.82 | |
| TIGR01381 | 664 | E1_like_apg7 E1-like protein-activating enzyme Gsa | 84.47 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 84.44 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 84.44 | |
| PRK14177 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 84.38 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 84.34 | |
| PRK14172 | 278 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 84.14 | |
| COG0529 | 197 | CysC Adenylylsulfate kinase and related kinases [I | 83.93 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 83.82 | |
| cd01486 | 307 | Apg7 Apg7 is an E1-like protein, that activates tw | 83.73 | |
| PF02571 | 249 | CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: | 83.71 | |
| PRK13302 | 271 | putative L-aspartate dehydrogenase; Provisional | 83.7 | |
| cd01491 | 286 | Ube1_repeat1 Ubiquitin activating enzyme (E1), rep | 83.6 | |
| PRK14190 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 83.36 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 83.33 | |
| PRK11064 | 415 | wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro | 83.14 | |
| PRK09288 | 395 | purT phosphoribosylglycinamide formyltransferase 2 | 82.84 | |
| PRK14166 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 82.83 | |
| COG0026 | 375 | PurK Phosphoribosylaminoimidazole carboxylase (NCA | 82.82 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 82.76 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 82.72 | |
| PRK04207 | 341 | glyceraldehyde-3-phosphate dehydrogenase; Provisio | 82.61 | |
| PRK14186 | 297 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 82.53 | |
| PRK09260 | 288 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 82.35 | |
| PRK14187 | 294 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 82.26 | |
| COG1004 | 414 | Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en | 82.19 | |
| PRK14169 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 82.15 | |
| PRK13303 | 265 | L-aspartate dehydrogenase; Provisional | 82.08 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 81.94 | |
| PF12076 | 164 | Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194 | 81.76 | |
| PRK14170 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 81.75 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 81.66 |
| >KOG1221|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-102 Score=800.21 Aligned_cols=462 Identities=40% Similarity=0.742 Sum_probs=449.4
Q ss_pred cchhhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCce
Q psy7538 21 PDRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKI 100 (543)
Q Consensus 21 ~~~i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v 100 (543)
.++|++||+||+|||||||||+||+|+|+||+.+|+|++||+|+|+++++++++|+++++++++|+.+++.+ |+...|+
T Consensus 3 ~~~i~~f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~-p~~l~Kv 81 (467)
T KOG1221|consen 3 ISDIVQFYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKK-PEALEKV 81 (467)
T ss_pred cccHHHHhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhC-ccceecc
Confidence 355999999999999999999999999999999999999999999999999999999999999999999999 8899999
Q ss_pred EEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccC
Q psy7538 101 QVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPS 180 (543)
Q Consensus 101 ~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~ 180 (543)
.+|.||+++++||+|++|++.+.++||+|||+||+++|+++++.++.+|+.||++++++|+++++++.|||+||+|++|.
T Consensus 82 ~pi~GDi~~~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~ 161 (467)
T KOG1221|consen 82 VPIAGDISEPDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCN 161 (467)
T ss_pred eeccccccCcccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccccCCCC--ChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecC
Q psy7538 181 EKVLEERTYLPPD--DPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIY 258 (543)
Q Consensus 181 ~~~i~E~~y~~p~--~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~ 258 (543)
...++|++|+.+. ++++++++.++++++.+++.+|++.++|||+|++||++||+++.++++ ++|++|+||++|.+++
T Consensus 162 ~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~-~lPivIiRPsiI~st~ 240 (467)
T KOG1221|consen 162 VGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAE-NLPLVIIRPSIITSTY 240 (467)
T ss_pred cccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhcc-CCCeEEEcCCceeccc
Confidence 9999999999998 899999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred CCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCC-CCCcEEEeecCCCCccc
Q psy7538 259 KEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKES-ERKSVCNLTSNKDYKIT 337 (543)
Q Consensus 259 ~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~-~~~~vyni~s~~~~~~t 337 (543)
.||+|||+||.+||.+++.++++|.++.+.++++...|+||||+|||++++++|.... ..+ .+..+||++++..||++
T Consensus 241 ~EP~pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~-~~~~~~~~IY~~tss~~Np~t 319 (467)
T KOG1221|consen 241 KEPFPGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAG-NSKEKTPPIYHLTSSNDNPVT 319 (467)
T ss_pred cCCCCCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhc-cCCCCCCcEEEecccccCccc
Confidence 9999999999999999999999999999999999999999999999999999988765 322 34679999999999999
Q ss_pred HHHHHHHHhhhhcCccCCCCccccCccccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHhhccccc
Q psy7538 338 WQEICDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFICCLLFHWIPAYFLDAVILISGNKPCLVRIQERIHRGFDVFEY 417 (543)
Q Consensus 338 ~~e~~~~i~~~~G~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~d~~~~~~G~kP~~~~~~~~l~~~~~~~~~ 417 (543)
|+++.+...++. .+.|++..+|+|...+.++.+.|.++.+++|++|++++|...++.|++|.+.++++++.++.++++|
T Consensus 320 ~~~~~e~~~~~~-~~~Pl~~~iw~P~~~~~sn~~~f~~~~~~~h~lPa~~~d~~~~i~g~k~~~~k~~~ki~~~~~~l~~ 398 (467)
T KOG1221|consen 320 WGDFIELALRYF-EKIPLEKMIWYPFGTLTSNPWLFNLAAFLYHTLPAYILDLLLRLLGKKPRLVKLYRKIHKLVKLLEP 398 (467)
T ss_pred HHHHHHHHHHhc-ccCCcccceeccCceeeecHhHHHHHHHHHHHhhHHHHHHHHHHhCCChhhhHHHHHHHHHHHhhhh
Confidence 999999999999 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCeEEEeCccHHHHhhhCCccccccccccCCCCCHHHHHHHHHHHHHHHhcCCCCccHHHHHHHHHH
Q psy7538 418 YANNEWEFKNGNLHQTRPKRNAREIVQYCVENDNVDIVKYFEKAVYGARYFLMKESPESLESARKKMKV 486 (543)
Q Consensus 418 f~~~~w~f~~~n~~~l~~~l~~~d~~~F~~d~~~i~w~~Y~~~~~~G~r~y~~ke~~~~~~~a~~~~~~ 486 (543)
|+.++|.|+++|+++|+..|+++||++|+||++++||++|+.+|+.|+|+|++||+++++|+||++++|
T Consensus 399 f~~~~w~Fd~~n~~~L~~~~~~~d~~~f~fd~~~ldW~ey~~~~i~G~r~~llKe~~e~l~~~r~~~kr 467 (467)
T KOG1221|consen 399 FSLFKWIFDNKNTEKLREKMSEEDKRLFNFDMKQLDWEEYFNRHLLGLRKYLLKESPESLPQARKRLKR 467 (467)
T ss_pred heeceEEecCccHHHHHHhCCHHHHhhcCCCcccCCHHHHHHHHHHHHHHHHhcCChhhhHHHHHhhcC
Confidence 999999999999999999999999999999999999999999999999999999999999999999875
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-80 Score=667.39 Aligned_cols=442 Identities=24% Similarity=0.409 Sum_probs=391.5
Q ss_pred hhhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHH-HHhcCchhHHHHhhcCcC-----C
Q psy7538 23 RIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVE-ELFESPVFDALKTLRGKS-----I 96 (543)
Q Consensus 23 ~i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~-~~~~~~~f~~l~~~~~~~-----~ 96 (543)
.|++||+||+|||||||||||++|+++|++.++++++||+|+|++++.++.+|++ ++++.++|++|+++. +. .
T Consensus 112 ~I~~f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~-g~~~~~~~ 190 (605)
T PLN02503 112 GIAEFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETH-GKSYQSFM 190 (605)
T ss_pred chhhhhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhc-Cccccccc
Confidence 4899999999999999999999999999999999999999999999999999995 899999999999877 43 2
Q ss_pred CCceEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCc
Q psy7538 97 LQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAY 176 (543)
Q Consensus 97 ~~~v~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y 176 (543)
..+++++.||+++++|||++++.+.+.+++|+|||+||.++++++++.+.++|+.||.+++++|++++++++|||+||+|
T Consensus 191 ~~Ki~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTay 270 (605)
T PLN02503 191 LSKLVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAY 270 (605)
T ss_pred cccEEEEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCce
Confidence 57999999999999999999999999999999999999999999999999999999999999999987789999999999
Q ss_pred cccCCC-cccccccC-------------------CCCChHHHHHHH----h--hcchhhhhh-----hhhhccCCCCchH
Q psy7538 177 CHPSEK-VLEERTYL-------------------PPDDPHQVILRA----E--SMKEEDLEV-----FRQDILGEFPNSY 225 (543)
Q Consensus 177 ~~~~~~-~i~E~~y~-------------------~p~~~~~~~~~~----~--~~~~~~~~~-----~~p~~~~~~pn~Y 225 (543)
++++.. .+.|+.|+ ++.++++++++. + +.+++..+. ++++++++|||+|
T Consensus 271 VyG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtY 350 (605)
T PLN02503 271 VNGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTY 350 (605)
T ss_pred eecCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChH
Confidence 999884 89999997 567899988887 2 233344444 7788999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHH
Q psy7538 226 AYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAIN 305 (543)
Q Consensus 226 ~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~ 305 (543)
++||++||+++.++.. ++|++|+||++|.++++||+|||+||.......+..+++|.++.++++++...|+||||.|||
T Consensus 351 t~TK~lAE~lV~~~~~-~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvn 429 (605)
T PLN02503 351 VFTKAMGEMVINSMRG-DIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVN 429 (605)
T ss_pred HHHHHHHHHHHHHhcC-CCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHHH
Confidence 9999999999998887 999999999999999999999999994433333344569999999999999999999999999
Q ss_pred HHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHHHHHhhhhcCccCCCCccccCccccccchhHHHHHHHHHhhhHH
Q psy7538 306 GVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEICDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFICCLLFHWIPA 385 (543)
Q Consensus 306 a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~~~i~~~~G~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~p~ 385 (543)
++++|++.... .....+++|||+++..||++|+++.+.+.+++ .+.|+....|+|. ..+.+.+.+.+..++.|+
T Consensus 430 a~i~a~a~~~~-~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~-~~~P~~~~~~~~~-~~~~~~~~~~~~~~~~h~--- 503 (605)
T PLN02503 430 ATLAAMAKHGG-AAKPEINVYQIASSVVNPLVFQDLARLLYEHY-KSSPYMDSKGRPI-HVPPMKLFSSMEDFSSHL--- 503 (605)
T ss_pred HHHHHHHhhhc-ccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHH-hhCCcccccCcce-eccCceehhhHHHHHHHH---
Confidence 99999654332 11235789999999999999999999999999 8999999999997 557888889999999886
Q ss_pred HHHHHHHHHh-----CCCchhhHHHHHHHH--------hhccccccccCeEEEeCccHHHHhhhCCccccccccccCCCC
Q psy7538 386 YFLDAVILIS-----GNKPCLVRIQERIHR--------GFDVFEYYANNEWEFKNGNLHQTRPKRNAREIVQYCVENDNV 452 (543)
Q Consensus 386 ~~~d~~~~~~-----G~kP~~~~~~~~l~~--------~~~~~~~f~~~~w~f~~~n~~~l~~~l~~~d~~~F~~d~~~i 452 (543)
+.|.++++. |.+|++.+.++++++ +.++++||+.++|.|+++|+++|++.|+++||++|+||++.|
T Consensus 504 -~~d~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~ft~~~w~F~~~n~~~L~~~ms~~Dr~~F~~D~~~i 582 (605)
T PLN02503 504 -WRDALLRSGLAGMSSSDRKLSQKLENICAKSVEQAKYLASIYEPYTFYGGRFDNSNTQRLMERMSEEEKAEFGFDVGSI 582 (605)
T ss_pred -HHHHHHHHhhhcccccChHHHHHHHHHHHHHHHHHHHHHHHHhhheeCeEEEechHHHHHHHhCCHHHhhccCCCcCCC
Confidence 566666554 478888887765444 789999999999999999999999999999999999999999
Q ss_pred CHHHHHHH-HHHHHHHHhcCCC
Q psy7538 453 DIVKYFEK-AVYGARYFLMKES 473 (543)
Q Consensus 453 ~w~~Y~~~-~~~G~r~y~~ke~ 473 (543)
||++|+++ |+.|+|+|++|+.
T Consensus 583 dW~~Y~~~~~i~G~rky~lk~~ 604 (605)
T PLN02503 583 DWRDYITNVHIPGLRRHVMKGR 604 (605)
T ss_pred CHHHHHHHhhhhHHHHHHhccC
Confidence 99999997 9999999999984
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-80 Score=660.11 Aligned_cols=446 Identities=26% Similarity=0.460 Sum_probs=402.6
Q ss_pred cchhhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHH-HHhcCchhHHHHhhcCcCCC--
Q psy7538 21 PDRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVE-ELFESPVFDALKTLRGKSIL-- 97 (543)
Q Consensus 21 ~~~i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~-~~~~~~~f~~l~~~~~~~~~-- 97 (543)
.++|++||+||+|||||||||||++|+++||++++++++||+|+|++++.++.+|++ ++.+.++|+++++.. +...
T Consensus 2 ~~~i~~~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~-~~~~~~ 80 (491)
T PLN02996 2 EGSCVQFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKL-GENLNS 80 (491)
T ss_pred cccHHHHhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhc-chhhhh
Confidence 368999999999999999999999999999999999999999999999999999996 899999999998766 4322
Q ss_pred ---CceEEEEccCCCCCCCCCHHH-HHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEe
Q psy7538 98 ---QKIQVISGDITQLKLGISEID-KKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIS 173 (543)
Q Consensus 98 ---~~v~~i~gDl~~~~lgls~~~-~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vS 173 (543)
.+++++.||+++++|||++++ ++.+++++|+|||+||.++++++++.+.++|+.||.+++++|++++++++|||+|
T Consensus 81 ~~~~kv~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vS 160 (491)
T PLN02996 81 LISEKVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVS 160 (491)
T ss_pred hhhcCEEEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEe
Confidence 789999999999999999876 6788899999999999999988899999999999999999999987799999999
Q ss_pred cCccccCCC-cccccccCCCC--------ChH--------HHHHHHhh-cchhhhhh------hhhhccCCCCchHHHHH
Q psy7538 174 TAYCHPSEK-VLEERTYLPPD--------DPH--------QVILRAES-MKEEDLEV------FRQDILGEFPNSYAYTK 229 (543)
Q Consensus 174 T~y~~~~~~-~i~E~~y~~p~--------~~~--------~~~~~~~~-~~~~~~~~------~~p~~~~~~pn~Y~~tK 229 (543)
|+++++... .++|+.|+++. +++ ++.+..++ ++++.++. ++|....+|||+|++||
T Consensus 161 T~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK 240 (491)
T PLN02996 161 TAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTK 240 (491)
T ss_pred eeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhH
Confidence 999997654 68898888655 444 34444444 66766663 67878899999999999
Q ss_pred HHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHH
Q psy7538 230 CLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFL 309 (543)
Q Consensus 230 ~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~ 309 (543)
++||+++.++.. ++|++|+||++|+|++++|.|||+++++++.+++.++++|..+.++|++++.+|+|||||||+++++
T Consensus 241 ~~aE~lv~~~~~-~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~ 319 (491)
T PLN02996 241 AMGEMLLGNFKE-NLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIV 319 (491)
T ss_pred HHHHHHHHHhcC-CCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHH
Confidence 999999998877 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhcccCCCCCCcEEEeecCCCCcccHHHHHHHHhhhhcCccCCC----CccccCccccccchhHHHHHHHHHhhhHH
Q psy7538 310 FTWDFLNSKESERKSVCNLTSNKDYKITWQEICDIGKDIVTSKIPFN----STLWYPGGTMTQSRLTHFICCLLFHWIPA 385 (543)
Q Consensus 310 a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~~~i~~~~G~~~p~~----~~~~~p~~~~~~~~~~~~~~~~~~~~~p~ 385 (543)
++++... . +..+++||++++..+++||+++++.+.+++ .+.|+. ..+|+|...++.+.+.|.++.++.|.+|+
T Consensus 320 a~~~~~~-~-~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~-~~~p~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~lp~ 396 (491)
T PLN02996 320 AMAAHAG-G-QGSEIIYHVGSSLKNPVKFSNLHDFAYRYF-SKNPWINKEGSPVKVGKGTILSTMASFSLYMTIRYLLPL 396 (491)
T ss_pred HHHHhhc-c-CCCCcEEEecCCCCCcccHHHHHHHHHHHh-hhCCCcCCCCCeEeeCCceecCcHHHHHHHHHHHHHhHH
Confidence 9987421 1 113679999998889999999999999999 788887 58999999999999999999999999999
Q ss_pred HHHHHHHH--HhCCCchhhHHHHHH---HHhhccccccccCeEEEeCccHHHHhhhCCccc---cccccccCCCCCHHHH
Q psy7538 386 YFLDAVIL--ISGNKPCLVRIQERI---HRGFDVFEYYANNEWEFKNGNLHQTRPKRNARE---IVQYCVENDNVDIVKY 457 (543)
Q Consensus 386 ~~~d~~~~--~~G~kP~~~~~~~~l---~~~~~~~~~f~~~~w~f~~~n~~~l~~~l~~~d---~~~F~~d~~~i~w~~Y 457 (543)
+++|.+.. ..|++|++.++++++ ++..++++||+.++|.|+++|+++|++.|+++| |++|+||++++||++|
T Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~w~f~~~n~~~l~~~~~~~d~~d~~~f~~d~~~~~w~~y 476 (491)
T PLN02996 397 KALQLVNIILPKRYGDKYTDLNRKIKLVMRLVDLYKPYVFFKGIFDDTNTEKLRIKRKETGKEEADMFDFDPKSIDWEDY 476 (491)
T ss_pred HHHHHHHHHhhhccChHHHHHHHHHHHHHHHHHHhhccccceEEEccHHHHHHHHHCCccccccccEeccCcccCCHHHH
Confidence 99998877 667999999999999 666999999999999999999999999999955 9999999999999999
Q ss_pred HHH-HHHHHHHHhcC
Q psy7538 458 FEK-AVYGARYFLMK 471 (543)
Q Consensus 458 ~~~-~~~G~r~y~~k 471 (543)
+++ |+.|+|+|++|
T Consensus 477 ~~~~~~~g~~~y~~k 491 (491)
T PLN02996 477 MTNVHIPGLVKYVLK 491 (491)
T ss_pred HHHhhHHHHHHHhcC
Confidence 999 99999999987
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-39 Score=307.66 Aligned_cols=307 Identities=22% Similarity=0.280 Sum_probs=242.3
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|++|||||.||||++.++.+++..++. +|.+++.-.-.-. .+-+.++ ...++..+++||+.|.
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~-~v~~~DkLTYAgn-~~~l~~~---------------~~~~~~~fv~~DI~D~ 63 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDD-HVVNLDKLTYAGN-LENLADV---------------EDSPRYRFVQGDICDR 63 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCc-eEEEEecccccCC-HHHHHhh---------------hcCCCceEEeccccCH
Confidence 689999999999999999999998874 6888776542211 1222222 2235889999999997
Q ss_pred CCCCCHHHHHHHhc--CccEEEEcCccCCCccc---HHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCC---
Q psy7538 111 KLGISEIDKKELID--NVDIVYHVAATIRFDEP---IKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEK--- 182 (543)
Q Consensus 111 ~lgls~~~~~~l~~--~vd~ViH~AA~v~~~~~---~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~--- 182 (543)
. .+.++++ .+|+|+|.||-.+.+.+ +..++++||.||.+||+++++.....+|+|+||.-++++..
T Consensus 64 ~------~v~~~~~~~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~ 137 (340)
T COG1088 64 E------LVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDD 137 (340)
T ss_pred H------HHHHHHHhcCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCC
Confidence 6 6888887 59999999999887754 46799999999999999999983335999999997766533
Q ss_pred -cccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCC
Q psy7538 183 -VLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKE 260 (543)
Q Consensus 183 -~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~ 260 (543)
..+|+. |..|. ++|..||+.++.+++.+.. +|+|++|.|+|+-|||++.
T Consensus 138 ~~FtE~t---p~~Ps--------------------------SPYSASKAasD~lVray~~TYglp~~ItrcSNNYGPyqf 188 (340)
T COG1088 138 DAFTETT---PYNPS--------------------------SPYSASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQF 188 (340)
T ss_pred CCcccCC---CCCCC--------------------------CCcchhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcC
Confidence 244542 22222 8999999999999999999 9999999999999999987
Q ss_pred CCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHH
Q psy7538 261 PLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQE 340 (543)
Q Consensus 261 p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e 340 (543)
|.- .-| .++..+..|...+++|+|.+++|++||+|-|+|+-..+.+... |++||++++ +..+--|
T Consensus 189 pEK------lIP-~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~kg~~------GE~YNIgg~--~E~~Nle 253 (340)
T COG1088 189 PEK------LIP-LMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKGKI------GETYNIGGG--NERTNLE 253 (340)
T ss_pred chh------hhH-HHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhcCcC------CceEEeCCC--ccchHHH
Confidence 721 112 3667888999999999999999999999999999999888765 899999999 8899999
Q ss_pred HHHHHhhhhcCccC-----CCCccccCccccccchhHHHHHHHHHhhhHHHHHH--HHHHHhCCCchhhHHHHHHHHhh-
Q psy7538 341 ICDIGKDIVTSKIP-----FNSTLWYPGGTMTQSRLTHFICCLLFHWIPAYFLD--AVILISGNKPCLVRIQERIHRGF- 412 (543)
Q Consensus 341 ~~~~i~~~~G~~~p-----~~~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~d--~~~~~~G~kP~~~~~~~~l~~~~- 412 (543)
+++.+.+.+|...| +.....+|+-. ..|.+| .+.+.+||+|... ++.++
T Consensus 254 vv~~i~~~l~~~~~~~~~li~~V~DRpGHD------------------~RYaid~~Ki~~eLgW~P~~~-----fe~Glr 310 (340)
T COG1088 254 VVKTICELLGKDKPDYRDLITFVEDRPGHD------------------RRYAIDASKIKRELGWRPQET-----FETGLR 310 (340)
T ss_pred HHHHHHHHhCccccchhhheEeccCCCCCc------------------cceeechHHHhhhcCCCcCCC-----HHHHHH
Confidence 99999999977666 33444445432 234444 4568999999664 45554
Q ss_pred ccccccccCeEEEeC
Q psy7538 413 DVFEYYANNEWEFKN 427 (543)
Q Consensus 413 ~~~~~f~~~~w~f~~ 427 (543)
++++||..|+|+|.+
T Consensus 311 kTv~WY~~N~~Ww~~ 325 (340)
T COG1088 311 KTVDWYLDNEWWWEP 325 (340)
T ss_pred HHHHHHHhchHHHhh
Confidence 688999999999875
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-40 Score=322.03 Aligned_cols=245 Identities=35% Similarity=0.580 Sum_probs=168.5
Q ss_pred EEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHH-HhcCchhHHHHhhcCcCCCCceEEEEccCCCCCCC
Q psy7538 35 LSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEE-LFESPVFDALKTLRGKSILQKIQVISGDITQLKLG 113 (543)
Q Consensus 35 ITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~-~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~~lg 113 (543)
|||||||||++|+++|+++++++ +||+|+|+++..++.+|+.+ +.+..+++....+ ..++++++.||++++.||
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~-~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~----~~~ri~~v~GDl~~~~lG 75 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDV-KIYCLVRASSSQSALERLKDALKEYGLWDDLDKE----ALSRIEVVEGDLSQPNLG 75 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TT-EEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HH----HTTTEEEEE--TTSGGGG
T ss_pred CcCCCcHHHHHHHHHHHcCCCCc-EEEEEEeCcccccchhhhhhhcccccchhhhhhh----hhccEEEEeccccccccC
Confidence 79999999999999999998767 99999999988888999965 4456666655321 246999999999999999
Q ss_pred CCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCC-cccccccCCC
Q psy7538 114 ISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEK-VLEERTYLPP 192 (543)
Q Consensus 114 ls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~-~i~E~~y~~p 192 (543)
|++++++.+.+++|+||||||.+++..+++.+.++||.||++++++|.+. +.++|+|+||+++.+... .+.|+.++.
T Consensus 76 L~~~~~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~-~~~~~~~iSTa~v~~~~~~~~~~~~~~~- 153 (249)
T PF07993_consen 76 LSDEDYQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQG-KRKRFHYISTAYVAGSRPGTIEEKVYPE- 153 (249)
T ss_dssp --HHHHHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSS-S---EEEEEEGGGTTS-TTT--SSS-HH-
T ss_pred CChHHhhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhc-cCcceEEeccccccCCCCCccccccccc-
Confidence 99999999999999999999999999999999999999999999999987 445999999988877654 344432210
Q ss_pred CChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCCCCCCCCCCCC-
Q psy7538 193 DDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKEPLPGWTDNIN- 270 (543)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~p~~gw~d~~~- 270 (543)
+.........++|+|..||++||+++.++.+ .|+|++|+||+.|+| +|.+||.+...
T Consensus 154 ------------------~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g---~~~~G~~~~~~~ 212 (249)
T PF07993_consen 154 ------------------EEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVG---DSRTGWWNSDDF 212 (249)
T ss_dssp ------------------H--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE----SSSSS---TTBH
T ss_pred ------------------ccccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccc---cCCCceeeccch
Confidence 1111223345679999999999999999987 499999999999999 46678988776
Q ss_pred chHHHHHHHhcCceeEEeecCCcccccchHHHHHHHH
Q psy7538 271 GPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGV 307 (543)
Q Consensus 271 g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~ 307 (543)
.+..+...+..|..+...++++...|+||||.||++|
T Consensus 213 ~~~~~~~~~~~~~~p~~~~~~~~~~d~vPVD~va~aI 249 (249)
T PF07993_consen 213 FPYLLRSCIALGAFPDLPGDPDARLDLVPVDYVARAI 249 (249)
T ss_dssp HHHHHHHHHHH-EEES-SB---TT--EEEHHHHHHHH
T ss_pred HHHHHHHHHHcCCcccccCCCCceEeEECHHHHHhhC
Confidence 5666777777888777788888889999999999986
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=297.28 Aligned_cols=294 Identities=20% Similarity=0.254 Sum_probs=228.7
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCc--eEEEEccCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQK--IQVISGDIT 108 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~--v~~i~gDl~ 108 (543)
|+||||||+||||+|.+..|++.|+ +|.+++.-..+. .....+ +.+++||+.
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~---~vvV~DNL~~g~-----------------------~~~v~~~~~~f~~gDi~ 54 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGH---EVVVLDNLSNGH-----------------------KIALLKLQFKFYEGDLL 54 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCC---eEEEEecCCCCC-----------------------HHHhhhccCceEEeccc
Confidence 6899999999999999999999998 566666554432 111122 689999999
Q ss_pred CCCCCCCHHHHHHHhc--CccEEEEcCccCCCccc---HHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCcccc--CC
Q psy7538 109 QLKLGISEIDKKELID--NVDIVYHVAATIRFDEP---IKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHP--SE 181 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~--~vd~ViH~AA~v~~~~~---~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~--~~ 181 (543)
|.. .+.++++ ++|.|||+||.....|+ +-..++.||.||.+|+++|++. ++++|||-||+.+++ ..
T Consensus 55 D~~------~L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~-gv~~~vFSStAavYG~p~~ 127 (329)
T COG1087 55 DRA------LLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQT-GVKKFIFSSTAAVYGEPTT 127 (329)
T ss_pred cHH------HHHHHHHhcCCCEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHh-CCCEEEEecchhhcCCCCC
Confidence 976 5777776 59999999998776554 3468999999999999999998 899999999995555 45
Q ss_pred CcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCC
Q psy7538 182 KVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKE 260 (543)
Q Consensus 182 ~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~ 260 (543)
.+|.|+....|. |+|+.||.+.|++++.+.+ +++.++++|..++.|+..+
T Consensus 128 ~PI~E~~~~~p~-----------------------------NPYG~sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~ 178 (329)
T COG1087 128 SPISETSPLAPI-----------------------------NPYGRSKLMSEEILRDAAKANPFKVVILRYFNVAGACPD 178 (329)
T ss_pred cccCCCCCCCCC-----------------------------CcchhHHHHHHHHHHHHHHhCCCcEEEEEecccccCCCC
Confidence 589998766665 9999999999999999988 7899999999999999865
Q ss_pred C-CCCCCCCCCchHHHHHHHhcCce--eEEee------cCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecC
Q psy7538 261 P-LPGWTDNINGPTGLLIGAGKGVI--RSMYC------KNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSN 331 (543)
Q Consensus 261 p-~~gw~d~~~g~~~~~~~~~~g~~--~~~~~------~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~ 331 (543)
. +..|-.+......++..++.|.. ..++| ||.+++|+|||.|+|+|+++|++.-.. + ....+||+++|
T Consensus 179 G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH~~Al~~L~~-~--g~~~~~NLG~G 255 (329)
T COG1087 179 GTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADAHVLALKYLKE-G--GSNNIFNLGSG 255 (329)
T ss_pred CccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHHHHHHHHHHHHh-C--CceeEEEccCC
Confidence 4 22233333222334455555544 34555 678999999999999999999987664 2 12369999999
Q ss_pred CCCcccHHHHHHHHhhhhcCccCCCCccccCccccccchhHHHHHHHHHhhhHHHH--HHHHHHHhCCCchhhHHHHHHH
Q psy7538 332 KDYKITWQEICDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFICCLLFHWIPAYF--LDAVILISGNKPCLVRIQERIH 409 (543)
Q Consensus 332 ~~~~~t~~e~~~~i~~~~G~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~--~d~~~~~~G~kP~~~~~~~~l~ 409 (543)
+..|..|+++.+.+..|...|.+....+|+.. |..+ .+.+.+.+||+|+...+..-++
T Consensus 256 --~G~SV~evi~a~~~vtg~~ip~~~~~RR~GDp------------------a~l~Ad~~kA~~~Lgw~p~~~~L~~ii~ 315 (329)
T COG1087 256 --NGFSVLEVIEAAKKVTGRDIPVEIAPRRAGDP------------------AILVADSSKARQILGWQPTYDDLEDIIK 315 (329)
T ss_pred --CceeHHHHHHHHHHHhCCcCceeeCCCCCCCC------------------ceeEeCHHHHHHHhCCCcccCCHHHHHH
Confidence 99999999999999998888887777777552 2332 3455789999999966544333
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=312.64 Aligned_cols=265 Identities=19% Similarity=0.196 Sum_probs=199.0
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|||||||||||++|+++|++.|+ +|++++|...+.. ..+.+... .+ . .....++.++.||+
T Consensus 13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~---~V~~~d~~~~~~~--~~~~~~~~-----~~---~-~~~~~~~~~~~~Di 78 (348)
T PRK15181 13 LAPKRWLITGVAGFIGSGLLEELLFLNQ---TVIGLDNFSTGYQ--HNLDDVRT-----SV---S-EEQWSRFIFIQGDI 78 (348)
T ss_pred ccCCEEEEECCccHHHHHHHHHHHHCCC---EEEEEeCCCCcch--hhhhhhhh-----cc---c-cccCCceEEEEccC
Confidence 5679999999999999999999999986 7889988654321 11111110 00 0 11124688999999
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccC--CC
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPS--EK 182 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~--~~ 182 (543)
++.+ ++..+++++|+|||+||..... +......++|+.||.+++++|++. ++++|||+||+.+++. ..
T Consensus 79 ~d~~------~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-~~~~~v~~SS~~vyg~~~~~ 151 (348)
T PRK15181 79 RKFT------DCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDA-HVSSFTYAASSSTYGDHPDL 151 (348)
T ss_pred CCHH------HHHHHhhCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeechHhhCCCCCC
Confidence 9864 7888889999999999976432 344567999999999999999998 8999999999966553 22
Q ss_pred cccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCCC
Q psy7538 183 VLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKEP 261 (543)
Q Consensus 183 ~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~p 261 (543)
++.|+....|. +.|+.||.++|+++..+.. ++++++++||++|||++..|
T Consensus 152 ~~~e~~~~~p~-----------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~ 202 (348)
T PRK15181 152 PKIEERIGRPL-----------------------------SPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNP 202 (348)
T ss_pred CCCCCCCCCCC-----------------------------ChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCC
Confidence 33443222222 7899999999999988776 68999999999999998654
Q ss_pred CCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHH
Q psy7538 262 LPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEI 341 (543)
Q Consensus 262 ~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~ 341 (543)
...+ . .-...++..+..|....+.+++++.+|+|||||+|++++.++..... . ..+++||++++ +++|++|+
T Consensus 203 ~~~~-~--~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~~~~~-~--~~~~~yni~~g--~~~s~~e~ 274 (348)
T PRK15181 203 NGAY-S--AVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDL-A--SKNKVYNVAVG--DRTSLNEL 274 (348)
T ss_pred CCcc-c--cCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcccc-c--CCCCEEEecCC--CcEeHHHH
Confidence 2110 0 11224555666677667789999999999999999999887754321 0 13679999998 88999999
Q ss_pred HHHHhhhhc
Q psy7538 342 CDIGKDIVT 350 (543)
Q Consensus 342 ~~~i~~~~G 350 (543)
++.+.+.++
T Consensus 275 ~~~i~~~~~ 283 (348)
T PRK15181 275 YYLIRDGLN 283 (348)
T ss_pred HHHHHHHhC
Confidence 999998884
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-35 Score=293.14 Aligned_cols=257 Identities=22% Similarity=0.257 Sum_probs=198.9
Q ss_pred EEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCCCCC
Q psy7538 34 FLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQLKLG 113 (543)
Q Consensus 34 lITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~~lg 113 (543)
|||||+||||++|+++|++.|+ +.+|.+++|........ . ........++.||+++++
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~-~~~Vr~~d~~~~~~~~~----~---------------~~~~~~~~~~~~Di~d~~-- 58 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGY-IYEVRVLDRSPPPKFLK----D---------------LQKSGVKEYIQGDITDPE-- 58 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCC-ceEEEEcccccccccch----h---------------hhcccceeEEEeccccHH--
Confidence 6999999999999999999985 55899998876542110 0 111223349999999986
Q ss_pred CCHHHHHHHhcCccEEEEcCccCCCc--ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccC---CCcc---c
Q psy7538 114 ISEIDKKELIDNVDIVYHVAATIRFD--EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPS---EKVL---E 185 (543)
Q Consensus 114 ls~~~~~~l~~~vd~ViH~AA~v~~~--~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~---~~~i---~ 185 (543)
++..+++++|+|||+||.+... .+.+..+++||.||++++++|++. ++++|||+||+.+..+ ..++ +
T Consensus 59 ----~l~~a~~g~d~V~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~-~VkrlVytSS~~vv~~~~~~~~~~~~d 133 (280)
T PF01073_consen 59 ----SLEEALEGVDVVFHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKA-GVKRLVYTSSISVVFDNYKGDPIINGD 133 (280)
T ss_pred ----HHHHHhcCCceEEEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcCcceeEeccCCCCcccCC
Confidence 8999999999999999988654 356779999999999999999998 9999999999977654 2222 3
Q ss_pred ccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh------cCCcEEEEecCeeeecCC
Q psy7538 186 ERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME------LGMPCMILRPSIVVPIYK 259 (543)
Q Consensus 186 E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~------~~lp~~IlRps~V~G~~~ 259 (543)
|+. +.|. .+.+.|+.||++||+++.+... ..+.++++||+.|||+++
T Consensus 134 E~~-~~~~--------------------------~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d 186 (280)
T PF01073_consen 134 EDT-PYPS--------------------------SPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGD 186 (280)
T ss_pred cCC-cccc--------------------------cccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCccc
Confidence 331 1111 1338999999999999998764 359999999999999976
Q ss_pred CCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhccc--CCCCCCcEEEeecCCCCccc
Q psy7538 260 EPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNS--KESERKSVCNLTSNKDYKIT 337 (543)
Q Consensus 260 ~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~--~~~~~~~vyni~s~~~~~~t 337 (543)
... . ..+...+..|......++++...|+++|+|||.|++.|+...... .....|++|+|+++ +|+.
T Consensus 187 ~~~--------~-~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~--~p~~ 255 (280)
T PF01073_consen 187 QRL--------V-PRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQALLEPGKPERVAGQAYFITDG--EPVP 255 (280)
T ss_pred ccc--------c-chhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHHhccccccccCCCcEEEEECC--CccC
Confidence 421 1 124445566656667888899999999999999999998764431 12346899999999 8999
Q ss_pred -HHHHHHHHhhhhcCccCC
Q psy7538 338 -WQEICDIGKDIVTSKIPF 355 (543)
Q Consensus 338 -~~e~~~~i~~~~G~~~p~ 355 (543)
+.||...+.+.+|.+.|.
T Consensus 256 ~~~~f~~~~~~~~G~~~~~ 274 (280)
T PF01073_consen 256 SFWDFMRPLWEALGYPPPK 274 (280)
T ss_pred cHHHHHHHHHHHCCCCCCc
Confidence 999999999999776553
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >KOG1502|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-32 Score=272.01 Aligned_cols=261 Identities=21% Similarity=0.289 Sum_probs=208.1
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
.+++|+|||||||||++|++.||++|| .|++.+|+.......+-+.++ +...+++..+.+|++
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY---~V~gtVR~~~~~k~~~~L~~l--------------~~a~~~l~l~~aDL~ 67 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGY---TVRGTVRDPEDEKKTEHLRKL--------------EGAKERLKLFKADLL 67 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCC---EEEEEEcCcchhhhHHHHHhc--------------ccCcccceEEecccc
Confidence 679999999999999999999999998 899999998764333334433 445567999999999
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCccCCCccc--HHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccC------
Q psy7538 109 QLKLGISEIDKKELIDNVDIVYHVAATIRFDEP--IKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPS------ 180 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~--~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~------ 180 (543)
+++ .+..++++||.|||+|+.+.++.. .++.++.+|.||.|+|++|++.+.++|+|++||..+...
T Consensus 68 d~~------sf~~ai~gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~ 141 (327)
T KOG1502|consen 68 DEG------SFDKAIDGCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIG 141 (327)
T ss_pred ccc------hHHHHHhCCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCC
Confidence 998 799999999999999999988533 557999999999999999999977999999999944322
Q ss_pred -CCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecC
Q psy7538 181 -EKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIY 258 (543)
Q Consensus 181 -~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~ 258 (543)
...++|+.+.++ +...... +.|..+|.+||+..+++++ .+++.+.+-|+.|+||.
T Consensus 142 ~~~vvdE~~wsd~---------------~~~~~~~--------~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~ 198 (327)
T KOG1502|consen 142 ENSVVDEESWSDL---------------DFCRCKK--------LWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPG 198 (327)
T ss_pred CCcccccccCCcH---------------HHHHhhH--------HHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCC
Confidence 224666654322 1111111 7899999999999999998 78999999999999998
Q ss_pred CCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccH
Q psy7538 259 KEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITW 338 (543)
Q Consensus 259 ~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~ 338 (543)
-.| ..+.....+....+|.... ..+....+|||+|||+|++.|++++.. .+.|.|.+. . .++
T Consensus 199 l~~------~l~~s~~~~l~~i~G~~~~---~~n~~~~~VdVrDVA~AHv~a~E~~~a------~GRyic~~~--~-~~~ 260 (327)
T KOG1502|consen 199 LQP------SLNSSLNALLKLIKGLAET---YPNFWLAFVDVRDVALAHVLALEKPSA------KGRYICVGE--V-VSI 260 (327)
T ss_pred ccc------ccchhHHHHHHHHhccccc---CCCCceeeEeHHHHHHHHHHHHcCccc------CceEEEecC--c-ccH
Confidence 766 2244445666777775443 234455599999999999999999886 568999886 4 569
Q ss_pred HHHHHHHhhhhcCccC
Q psy7538 339 QEICDIGKDIVTSKIP 354 (543)
Q Consensus 339 ~e~~~~i~~~~G~~~p 354 (543)
.|+++.+.+.+ ...+
T Consensus 261 ~ei~~~l~~~~-P~~~ 275 (327)
T KOG1502|consen 261 KEIADILRELF-PDYP 275 (327)
T ss_pred HHHHHHHHHhC-CCCC
Confidence 99999999998 6655
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-33 Score=292.46 Aligned_cols=292 Identities=17% Similarity=0.193 Sum_probs=210.0
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
++|+|||||||||||++|+++|++.|+ +|+++.|...+. .+.+..+ ....+++++.+|+.
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~---~V~~ldr~~~~~--~~~~~~~---------------~~~~~~~~~~~Di~ 178 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGRGD---EVIVIDNFFTGR--KENLVHL---------------FGNPRFELIRHDVV 178 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCC---EEEEEeCCCCcc--HhHhhhh---------------ccCCceEEEECccc
Confidence 458999999999999999999999987 788888864321 1111111 01236788999987
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCccCCC---cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC--Cc
Q psy7538 109 QLKLGISEIDKKELIDNVDIVYHVAATIRF---DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE--KV 183 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~vd~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~--~~ 183 (543)
++. +.++|+||||||.... ..+....+++|+.||.+++++|++. +. +|||+||.+++++. .+
T Consensus 179 ~~~-----------~~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~-g~-r~V~~SS~~VYg~~~~~p 245 (436)
T PLN02166 179 EPI-----------LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-GA-RFLLTSTSEVYGDPLEHP 245 (436)
T ss_pred ccc-----------ccCCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHh-CC-EEEEECcHHHhCCCCCCC
Confidence 653 2579999999996542 3445678999999999999999998 54 89999999777643 34
Q ss_pred ccccccC--CCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCC
Q psy7538 184 LEERTYL--PPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKE 260 (543)
Q Consensus 184 i~E~~y~--~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~ 260 (543)
++|+.+. .|.+|. +.|+.||..+|+++..+.+ .+++++++||++|||++..
T Consensus 246 ~~E~~~~~~~p~~p~--------------------------s~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~ 299 (436)
T PLN02166 246 QKETYWGNVNPIGER--------------------------SCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMC 299 (436)
T ss_pred CCccccccCCCCCCC--------------------------CchHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCC
Confidence 5665321 122222 7899999999999999876 6899999999999998753
Q ss_pred CCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHH
Q psy7538 261 PLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQE 340 (543)
Q Consensus 261 p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e 340 (543)
+..+ .-...++..+..|....+++++++.+|||||+|+|++++.++... . .++||++++ +++|+.|
T Consensus 300 ~~~~-----~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~~-~------~giyNIgs~--~~~Si~e 365 (436)
T PLN02166 300 LDDG-----RVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEGE-H------VGPFNLGNP--GEFTMLE 365 (436)
T ss_pred CCcc-----chHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhcC-C------CceEEeCCC--CcEeHHH
Confidence 2111 112346667777777777899999999999999999999888642 2 459999998 8899999
Q ss_pred HHHHHhhhhcCccCCCCccccCccccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHH
Q psy7538 341 ICDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFICCLLFHWIPAYFLDAVILISGNKPCLVRIQERIHR 410 (543)
Q Consensus 341 ~~~~i~~~~G~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~d~~~~~~G~kP~~~~~~~~l~~ 410 (543)
+++.+.+.+|...... +.|... ..... .....+.+.+.+||+|+.. +.+.+.+
T Consensus 366 la~~I~~~~g~~~~i~---~~p~~~---~~~~~----------~~~d~~Ka~~~LGw~P~~s-l~egl~~ 418 (436)
T PLN02166 366 LAEVVKETIDSSATIE---FKPNTA---DDPHK----------RKPDISKAKELLNWEPKIS-LREGLPL 418 (436)
T ss_pred HHHHHHHHhCCCCCee---eCCCCC---CCccc----------cccCHHHHHHHcCCCCCCC-HHHHHHH
Confidence 9999999995443221 222111 00000 0123455678899999874 5555554
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-33 Score=290.67 Aligned_cols=285 Identities=18% Similarity=0.166 Sum_probs=194.5
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhC-CCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLE-PNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g-~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+.|+|||||||||||++|+++|++.| + +|++++|.... ...+.... . +....+++++.+|+
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~---~V~~l~r~~~~------~~~l~~~~--------~-~~~~~~~~~~~~Dl 74 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTETPH---KVLALDVYNDK------IKHLLEPD--------T-VPWSGRIQFHRINI 74 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcCCC---EEEEEecCchh------hhhhhccc--------c-ccCCCCeEEEEcCC
Confidence 45899999999999999999999984 5 78888886421 11111000 0 11224799999999
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCccCCC---cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC--C
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAATIRF---DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE--K 182 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~--~ 182 (543)
++.. ++..+++++|+|||+||.... .......+..|+.|+.+++++|++. + ++|||+||+++++.. .
T Consensus 75 ~d~~------~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~-~-~r~v~~SS~~vYg~~~~~ 146 (386)
T PLN02427 75 KHDS------RLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN-N-KRLIHFSTCEVYGKTIGS 146 (386)
T ss_pred CChH------HHHHHhhcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhc-C-CEEEEEeeeeeeCCCcCC
Confidence 9875 788889999999999996542 2333456778999999999999987 5 899999999776643 2
Q ss_pred cccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCCC
Q psy7538 183 VLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKEP 261 (543)
Q Consensus 183 ~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~p 261 (543)
.++|+....+..... ..+++ .......-.....+.|+.||.++|+++..+.+ .+++++|+||++|||+....
T Consensus 147 ~~~e~~p~~~~~~~~------~~~e~-~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~ 219 (386)
T PLN02427 147 FLPKDHPLRQDPAFY------VLKED-ESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDF 219 (386)
T ss_pred CCCcccccccccccc------ccccc-ccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCc
Confidence 233332111100000 00000 00000000011236899999999999998776 68999999999999998654
Q ss_pred CCCCC---CCCCc-hHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCccc
Q psy7538 262 LPGWT---DNING-PTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKIT 337 (543)
Q Consensus 262 ~~gw~---d~~~g-~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t 337 (543)
.+|-. +.... ...++..+.++....+.+++++.+|+|||+|+|++++.++.+... ..+++||++++. ++++
T Consensus 220 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~----~~g~~yni~~~~-~~~s 294 (386)
T PLN02427 220 IPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPAR----ANGHIFNVGNPN-NEVT 294 (386)
T ss_pred cccccccccccchHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCccc----ccCceEEeCCCC-CCcc
Confidence 33210 00011 112334555676667788889999999999999999999876431 136799999861 3899
Q ss_pred HHHHHHHHhhhhcC
Q psy7538 338 WQEICDIGKDIVTS 351 (543)
Q Consensus 338 ~~e~~~~i~~~~G~ 351 (543)
+.|+++.+.+.+|.
T Consensus 295 ~~el~~~i~~~~g~ 308 (386)
T PLN02427 295 VRQLAEMMTEVYAK 308 (386)
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999999853
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-33 Score=286.60 Aligned_cols=253 Identities=18% Similarity=0.241 Sum_probs=190.2
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|||||||||||++|+++|++.|++ .|.+..|..+... ..++.. .....++.++.+|++++
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~--~v~~~~~~~~~~~-~~~~~~---------------~~~~~~~~~~~~Dl~d~ 63 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSD--AVVVVDKLTYAGN-LMSLAP---------------VAQSERFAFEKVDICDR 63 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCC--EEEEEecCccccc-hhhhhh---------------cccCCceEEEECCCcCh
Confidence 68999999999999999999999863 2434444321110 111110 01123678899999987
Q ss_pred CCCCCHHHHHHHhcC--ccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhc--------cCCceEEEEecCcc
Q psy7538 111 KLGISEIDKKELIDN--VDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQM--------KNLKCFTYISTAYC 177 (543)
Q Consensus 111 ~lgls~~~~~~l~~~--vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~--------~~l~~~V~vST~y~ 177 (543)
+ +++.++++ +|+|||+||....+ +..+..+++|+.||.+++++|++. +++++|||+||..+
T Consensus 64 ~------~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~v 137 (355)
T PRK10217 64 A------ELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEV 137 (355)
T ss_pred H------HHHHHHhhcCCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhh
Confidence 5 78887774 89999999986543 345678999999999999999863 35789999999865
Q ss_pred ccC----CCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecC
Q psy7538 178 HPS----EKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPS 252 (543)
Q Consensus 178 ~~~----~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps 252 (543)
++. ..+++|+....|. +.|+.||..+|.++..+.+ .+++++++||+
T Consensus 138 yg~~~~~~~~~~E~~~~~p~-----------------------------s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~ 188 (355)
T PRK10217 138 YGDLHSTDDFFTETTPYAPS-----------------------------SPYSASKASSDHLVRAWLRTYGLPTLITNCS 188 (355)
T ss_pred cCCCCCCCCCcCCCCCCCCC-----------------------------ChhHHHHHHHHHHHHHHHHHhCCCeEEEeee
Confidence 543 2246665332222 7899999999999998866 68999999999
Q ss_pred eeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCC
Q psy7538 253 IVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNK 332 (543)
Q Consensus 253 ~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~ 332 (543)
+|||+...|- .....++..+..|....+++++++.+|++||+|+|++++.++.... .+++||++++
T Consensus 189 ~v~Gp~~~~~-------~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~~~~~~~------~~~~yni~~~- 254 (355)
T PRK10217 189 NNYGPYHFPE-------KLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATTGK------VGETYNIGGH- 254 (355)
T ss_pred eeeCCCCCcc-------cHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHHHHhcCC------CCCeEEeCCC-
Confidence 9999976431 1112345556666666678999999999999999999998887533 2679999999
Q ss_pred CCcccHHHHHHHHhhhhcC
Q psy7538 333 DYKITWQEICDIGKDIVTS 351 (543)
Q Consensus 333 ~~~~t~~e~~~~i~~~~G~ 351 (543)
+++|+.|+++.+.+.+|.
T Consensus 255 -~~~s~~~~~~~i~~~~~~ 272 (355)
T PRK10217 255 -NERKNLDVVETICELLEE 272 (355)
T ss_pred -CcccHHHHHHHHHHHhcc
Confidence 899999999999998853
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-33 Score=309.78 Aligned_cols=260 Identities=20% Similarity=0.222 Sum_probs=198.1
Q ss_pred hhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 26 KTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 26 ~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
.||++|+|||||||||||++|+++|++.|++. +|++++|...... ..++.. .....+++++.+
T Consensus 2 ~~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~-~V~~~d~~~~~~~-~~~l~~---------------~~~~~~v~~~~~ 64 (668)
T PLN02260 2 ATYEPKNILITGAAGFIASHVANRLIRNYPDY-KIVVLDKLDYCSN-LKNLNP---------------SKSSPNFKFVKG 64 (668)
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHhCCCC-EEEEEeCCCccch-hhhhhh---------------cccCCCeEEEEC
Confidence 58999999999999999999999999986654 7888887532111 111100 112247899999
Q ss_pred cCCCCCCCCCHHHHHHHh--cCccEEEEcCccCCCcc---cHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccC
Q psy7538 106 DITQLKLGISEIDKKELI--DNVDIVYHVAATIRFDE---PIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPS 180 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~--~~vd~ViH~AA~v~~~~---~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~ 180 (543)
|+++++ .+..++ .++|+|||+||....+. ......++|+.||.+++++|++.+.+++|||+||..+++.
T Consensus 65 Dl~d~~------~~~~~~~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~ 138 (668)
T PLN02260 65 DIASAD------LVNYLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGE 138 (668)
T ss_pred CCCChH------HHHHHHhhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCC
Confidence 999875 455544 57999999999876543 3356789999999999999999855899999999977664
Q ss_pred CCc-----ccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCee
Q psy7538 181 EKV-----LEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIV 254 (543)
Q Consensus 181 ~~~-----i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V 254 (543)
... .+|+....| .+.|+.||..+|+++..+.+ .+++++|+||++|
T Consensus 139 ~~~~~~~~~~E~~~~~p-----------------------------~~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~V 189 (668)
T PLN02260 139 TDEDADVGNHEASQLLP-----------------------------TNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNV 189 (668)
T ss_pred CccccccCccccCCCCC-----------------------------CCCcHHHHHHHHHHHHHHHHHcCCCEEEECcccc
Confidence 321 122211111 17899999999999998876 6999999999999
Q ss_pred eecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCC
Q psy7538 255 VPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDY 334 (543)
Q Consensus 255 ~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~ 334 (543)
||+.+.+. . -...++..+..|....+++++++.+++|||+|+|+++..++..... +++||++++ +
T Consensus 190 yGp~~~~~-----~--~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~~~~------~~vyni~~~--~ 254 (668)
T PLN02260 190 YGPNQFPE-----K--LIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGEV------GHVYNIGTK--K 254 (668)
T ss_pred cCcCCCcc-----c--HHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhcCCC------CCEEEECCC--C
Confidence 99975320 1 1123455566677667789999999999999999999988765433 679999998 8
Q ss_pred cccHHHHHHHHhhhhcCc
Q psy7538 335 KITWQEICDIGKDIVTSK 352 (543)
Q Consensus 335 ~~t~~e~~~~i~~~~G~~ 352 (543)
++++.|+++.+.+.+|..
T Consensus 255 ~~s~~el~~~i~~~~g~~ 272 (668)
T PLN02260 255 ERRVIDVAKDICKLFGLD 272 (668)
T ss_pred eeEHHHHHHHHHHHhCCC
Confidence 899999999999999643
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=291.77 Aligned_cols=298 Identities=15% Similarity=0.157 Sum_probs=210.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
.++|+|||||||||||++|++.|++.|+ +|++++|...+. .+++... ....+++++.+|+
T Consensus 117 ~~~~kILVTGatGfIGs~Lv~~Ll~~G~---~V~~ld~~~~~~--~~~~~~~---------------~~~~~~~~i~~D~ 176 (442)
T PLN02206 117 RKGLRVVVTGGAGFVGSHLVDRLMARGD---SVIVVDNFFTGR--KENVMHH---------------FSNPNFELIRHDV 176 (442)
T ss_pred cCCCEEEEECcccHHHHHHHHHHHHCcC---EEEEEeCCCccc--hhhhhhh---------------ccCCceEEEECCc
Confidence 3679999999999999999999999987 788887753221 1111110 1124678889998
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCccCCC---cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC--C
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAATIRF---DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE--K 182 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~--~ 182 (543)
.++. +.++|+|||+||.... ..+....+++|+.||.+++++|++. ++ +|||+||.+++++. .
T Consensus 177 ~~~~-----------l~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~-g~-r~V~~SS~~VYg~~~~~ 243 (442)
T PLN02206 177 VEPI-----------LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-GA-RFLLTSTSEVYGDPLQH 243 (442)
T ss_pred cChh-----------hcCCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHh-CC-EEEEECChHHhCCCCCC
Confidence 7653 2579999999996542 2345678999999999999999998 54 89999999776543 2
Q ss_pred cccccccC--CCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCC
Q psy7538 183 VLEERTYL--PPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYK 259 (543)
Q Consensus 183 ~i~E~~y~--~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~ 259 (543)
+.+|+.+. .|.++. +.|+.+|..+|+++..+.+ .+++++++||++|||+..
T Consensus 244 p~~E~~~~~~~P~~~~--------------------------s~Y~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~ 297 (442)
T PLN02206 244 PQVETYWGNVNPIGVR--------------------------SCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRM 297 (442)
T ss_pred CCCccccccCCCCCcc--------------------------chHHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCC
Confidence 45555321 122211 7899999999999998876 689999999999999875
Q ss_pred CCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHH
Q psy7538 260 EPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQ 339 (543)
Q Consensus 260 ~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~ 339 (543)
.+..+ .....++..+..+....+++++++.+|++||+|+|++++.++.... +++||++++ +++|+.
T Consensus 298 ~~~~~-----~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~~~-------~g~yNIgs~--~~~sl~ 363 (442)
T PLN02206 298 CIDDG-----RVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEH-------VGPFNLGNP--GEFTML 363 (442)
T ss_pred Ccccc-----chHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhcCC-------CceEEEcCC--CceeHH
Confidence 32111 1122456666666666778999999999999999999998886432 458999998 889999
Q ss_pred HHHHHHhhhhcCccCCCCccccCccccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHhhcccccc
Q psy7538 340 EICDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFICCLLFHWIPAYFLDAVILISGNKPCLVRIQERIHRGFDVFEYY 418 (543)
Q Consensus 340 e~~~~i~~~~G~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~d~~~~~~G~kP~~~~~~~~l~~~~~~~~~f 418 (543)
|+++.+.+.+|....+. +.|..... .. ......+.+.+.+||+|++. +.+.+.+ +++||
T Consensus 364 Elae~i~~~~g~~~~i~---~~p~~~~~--~~-----------~~~~d~sKa~~~LGw~P~~~-l~egl~~---~~~~~ 422 (442)
T PLN02206 364 ELAKVVQETIDPNAKIE---FRPNTEDD--PH-----------KRKPDITKAKELLGWEPKVS-LRQGLPL---MVKDF 422 (442)
T ss_pred HHHHHHHHHhCCCCcee---eCCCCCCC--cc-----------ccccCHHHHHHHcCCCCCCC-HHHHHHH---HHHHH
Confidence 99999999985432221 12211000 00 01123456678899999874 4444444 44444
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-32 Score=289.81 Aligned_cols=275 Identities=15% Similarity=0.133 Sum_probs=194.3
Q ss_pred hhhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCC-C-------------HHHHHHHHhcCchhHHH
Q psy7538 23 RIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGK-T-------------PNQRVEELFESPVFDAL 88 (543)
Q Consensus 23 ~i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~-~-------------~~~rl~~~~~~~~f~~l 88 (543)
....-+++|+|||||||||||++|+++|++.|+ +|++++|..... . ..++++.+
T Consensus 40 ~~~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~---~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--------- 107 (442)
T PLN02572 40 GSSSSSKKKKVMVIGGDGYCGWATALHLSKRGY---EVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRW--------- 107 (442)
T ss_pred CCCccccCCEEEEECCCcHHHHHHHHHHHHCCC---eEEEEeccccccccccccccccccccchHHHHHHH---------
Confidence 345567889999999999999999999999987 677765432111 0 01122111
Q ss_pred HhhcCcCCCCceEEEEccCCCCCCCCCHHHHHHHhc--CccEEEEcCccCCCc----c--cHHHHHHHHHHHHHHHHHHH
Q psy7538 89 KTLRGKSILQKIQVISGDITQLKLGISEIDKKELID--NVDIVYHVAATIRFD----E--PIKTAVILNTRGTRDMLELS 160 (543)
Q Consensus 89 ~~~~~~~~~~~v~~i~gDl~~~~lgls~~~~~~l~~--~vd~ViH~AA~v~~~----~--~~~~~~~~Nv~gt~~ll~~a 160 (543)
. .....+++++.+|+++++ ++..+++ ++|+|||+||..... . .....+++|+.||.+++++|
T Consensus 108 ~----~~~~~~v~~v~~Dl~d~~------~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa 177 (442)
T PLN02572 108 K----EVSGKEIELYVGDICDFE------FLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAI 177 (442)
T ss_pred H----HhhCCcceEEECCCCCHH------HHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHH
Confidence 0 001236889999999875 6887777 589999999875422 1 12345789999999999999
Q ss_pred HhccCCc-eEEEEecCccccCC-Cccccccc-----------CCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHH
Q psy7538 161 KQMKNLK-CFTYISTAYCHPSE-KVLEERTY-----------LPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAY 227 (543)
Q Consensus 161 ~~~~~l~-~~V~vST~y~~~~~-~~i~E~~y-----------~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~ 227 (543)
++. +++ +|||+||..+++.. .+++|... +.|.. | .+.|+.
T Consensus 178 ~~~-gv~~~~V~~SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~--------------------P------~s~Yg~ 230 (442)
T PLN02572 178 KEF-APDCHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQ--------------------A------SSFYHL 230 (442)
T ss_pred HHh-CCCccEEEEecceecCCCCCCCcccccccccccccccccCCCC--------------------C------CCcchh
Confidence 998 675 89999999776542 23333211 11111 1 178999
Q ss_pred HHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCCCC---CCCCC-----CC--CchHHHHHHHhcCceeEEeecCCcccc
Q psy7538 228 TKCLAEGLVAECME-LGMPCMILRPSIVVPIYKEPL---PGWTD-----NI--NGPTGLLIGAGKGVIRSMYCKNTGMAD 296 (543)
Q Consensus 228 tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~p~---~gw~d-----~~--~g~~~~~~~~~~g~~~~~~~~~~~~~d 296 (543)
||..+|.++..+++ +|++++++||++|||+++.+. |.-+. +. .....++..+..|....+++++++.+|
T Consensus 231 SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rd 310 (442)
T PLN02572 231 SKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRG 310 (442)
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcccchhhHHHHHHHHHhcCCCceecCCCCEEEC
Confidence 99999999998877 799999999999999986431 11111 10 112234556667776667899999999
Q ss_pred cchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHHHHHhhh---hcCc
Q psy7538 297 FLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEICDIGKDI---VTSK 352 (543)
Q Consensus 297 ~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~~~i~~~---~G~~ 352 (543)
||||||+|++++.++..... . ....+||+++ .++|++|+++.+.+. .|.+
T Consensus 311 fi~V~Dva~a~~~al~~~~~-~--g~~~i~Nigs---~~~si~el~~~i~~~~~~~g~~ 363 (442)
T PLN02572 311 FLDIRDTVRCIEIAIANPAK-P--GEFRVFNQFT---EQFSVNELAKLVTKAGEKLGLD 363 (442)
T ss_pred eEEHHHHHHHHHHHHhChhh-c--CceeEEEeCC---CceeHHHHHHHHHHHHHhhCCC
Confidence 99999999999999875432 0 0135899975 469999999999998 7544
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=284.37 Aligned_cols=264 Identities=15% Similarity=0.136 Sum_probs=191.2
Q ss_pred CEEEEEcCcchhHHHHHHHHHhh-CCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRL-EPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~-g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
|+|||||||||||++|+++|++. |+ +|+++.|+.. +...+ ....+++++.+|+++
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~---~V~~~~r~~~------~~~~~---------------~~~~~~~~~~~Dl~~ 57 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDW---EVYGMDMQTD------RLGDL---------------VNHPRMHFFEGDITI 57 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCC---eEEEEeCcHH------HHHHh---------------ccCCCeEEEeCCCCC
Confidence 68999999999999999999986 45 7889988542 11111 012468899999984
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCccCCC---cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC--Ccc
Q psy7538 110 LKLGISEIDKKELIDNVDIVYHVAATIRF---DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE--KVL 184 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~--~~i 184 (543)
+. +.+..+++++|+|||+||.... ..+....+++|+.|+.+++++|++. + ++|||+||+.+++.. .++
T Consensus 58 ~~-----~~~~~~~~~~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~-~-~~~v~~SS~~vyg~~~~~~~ 130 (347)
T PRK11908 58 NK-----EWIEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY-G-KHLVFPSTSEVYGMCPDEEF 130 (347)
T ss_pred CH-----HHHHHHHcCCCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhc-C-CeEEEEecceeeccCCCcCc
Confidence 22 3677788899999999996532 3445667899999999999999997 5 799999999766542 234
Q ss_pred cccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCCCCC
Q psy7538 185 EERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKEPLP 263 (543)
Q Consensus 185 ~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~p~~ 263 (543)
+|+..+....| .....+.|+.||..+|+++..+.. .+++++++||+.|||++..+..
T Consensus 131 ~ee~~~~~~~~----------------------~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~ 188 (347)
T PRK11908 131 DPEASPLVYGP----------------------INKPRWIYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIY 188 (347)
T ss_pred CccccccccCc----------------------CCCccchHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCC
Confidence 44322110000 001126899999999999998876 7999999999999999865421
Q ss_pred CCCCCCC-chHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHH
Q psy7538 264 GWTDNIN-GPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEIC 342 (543)
Q Consensus 264 gw~d~~~-g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~ 342 (543)
.--+... -...++..+..|....+.+++++.+|+|||+|+|++++.++.+... . ..+++||++++. +.+|++|++
T Consensus 189 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~~~~~~~~~-~--~~g~~yni~~~~-~~~s~~e~~ 264 (347)
T PRK11908 189 TPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALMKIIENKDG-V--ASGKIYNIGNPK-NNHSVRELA 264 (347)
T ss_pred ccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHHHHHhCccc-c--CCCCeEEeCCCC-CCcCHHHHH
Confidence 0000001 1123555666777666778889999999999999999998876421 0 136799999851 479999999
Q ss_pred HHHhhhhcC
Q psy7538 343 DIGKDIVTS 351 (543)
Q Consensus 343 ~~i~~~~G~ 351 (543)
+.+.+.+|.
T Consensus 265 ~~i~~~~~~ 273 (347)
T PRK11908 265 NKMLELAAE 273 (347)
T ss_pred HHHHHHhcC
Confidence 999999853
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-32 Score=281.16 Aligned_cols=263 Identities=17% Similarity=0.199 Sum_probs=184.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|||||||||||++|+++|++.|+ +|++++|..........+..+ + ...+++++.+|+
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~--------------~-~~~~~~~~~~Dl 68 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQKGY---AVNTTVRDPENQKKIAHLRAL--------------Q-ELGDLKIFGADL 68 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHCCC---EEEEEECCCCCHHHHHHHHhc--------------C-CCCceEEEEcCC
Confidence 4589999999999999999999999987 788888875321100000000 1 113688999999
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCccCCCc--ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC----
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAATIRFD--EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE---- 181 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~--~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~---- 181 (543)
++++ ++..+++++|+|||+||..... .+....+++|+.|+.+++++|.+.+++++|||+||+.+++..
T Consensus 69 ~d~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~ 142 (338)
T PLN00198 69 TDEE------SFEAPIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSG 142 (338)
T ss_pred CChH------HHHHHHhcCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCC
Confidence 9876 6888889999999999976543 233456799999999999999887568999999998665421
Q ss_pred --CcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecC
Q psy7538 182 --KVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIY 258 (543)
Q Consensus 182 --~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~ 258 (543)
.+++|+.+.. . ..+++.. ...++|+.||..+|+++..+.+ ++++++++||++|||+.
T Consensus 143 ~~~~~~E~~~~~----~-----------~~~~~~~-----~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~ 202 (338)
T PLN00198 143 TGLVMNEKNWTD----V-----------EFLTSEK-----PPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPS 202 (338)
T ss_pred CCceeccccCCc----h-----------hhhhhcC-----CccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCC
Confidence 2345542110 0 0000000 1116799999999999999877 79999999999999997
Q ss_pred CCCCCCCCCCCCchHHHHHHHhcCceeEEee-cC----CcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCC
Q psy7538 259 KEPLPGWTDNINGPTGLLIGAGKGVIRSMYC-KN----TGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKD 333 (543)
Q Consensus 259 ~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~-~~----~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~ 333 (543)
..+. + .....++..+..|....+.+ ++ +..+|||||||+|++++.++..... ++.|+ +++
T Consensus 203 ~~~~---~---~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~~~~------~~~~~-~~~-- 267 (338)
T PLN00198 203 LTSD---I---PSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHVEDVCRAHIFLAEKESA------SGRYI-CCA-- 267 (338)
T ss_pred ccCC---C---CCcHHHHHHHHcCCccccccccccccccCCcceeEHHHHHHHHHHHhhCcCc------CCcEE-Eec--
Confidence 6431 1 11112333445554433333 22 2347999999999999998876443 34685 555
Q ss_pred CcccHHHHHHHHhhhh
Q psy7538 334 YKITWQEICDIGKDIV 349 (543)
Q Consensus 334 ~~~t~~e~~~~i~~~~ 349 (543)
.++++.|+++.+.+..
T Consensus 268 ~~~s~~el~~~i~~~~ 283 (338)
T PLN00198 268 ANTSVPELAKFLIKRY 283 (338)
T ss_pred CCCCHHHHHHHHHHHC
Confidence 5789999999999887
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-32 Score=304.54 Aligned_cols=273 Identities=16% Similarity=0.127 Sum_probs=202.0
Q ss_pred cchhhhhcCCCEEEEEcCcchhHHHHHHHHHhh-CCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCc
Q psy7538 21 PDRIAKTYENKSIFLSGGSGFLGKVLIEKILRL-EPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQK 99 (543)
Q Consensus 21 ~~~i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~-g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~ 99 (543)
+.+-+.|.++|+|||||||||||++|+++|++. |+ +|++++|..... .++ . ...+
T Consensus 306 ~~~~~~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~---~V~~l~r~~~~~---~~~-----------------~-~~~~ 361 (660)
T PRK08125 306 SKPACSAKRRTRVLILGVNGFIGNHLTERLLRDDNY---EVYGLDIGSDAI---SRF-----------------L-GHPR 361 (660)
T ss_pred ccchhhhhcCCEEEEECCCchHHHHHHHHHHhCCCc---EEEEEeCCchhh---hhh-----------------c-CCCc
Confidence 355678899999999999999999999999985 55 889999865321 000 0 1246
Q ss_pred eEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCC---cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCc
Q psy7538 100 IQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRF---DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAY 176 (543)
Q Consensus 100 v~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y 176 (543)
++++.||++++. ..++.+++++|+|||+||.... .......+++|+.||.+++++|++. + ++|||+||++
T Consensus 362 ~~~~~gDl~d~~-----~~l~~~l~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~-~-~~~V~~SS~~ 434 (660)
T PRK08125 362 FHFVEGDISIHS-----EWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKY-N-KRIIFPSTSE 434 (660)
T ss_pred eEEEeccccCcH-----HHHHHHhcCCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhc-C-CeEEEEcchh
Confidence 889999999864 1356777899999999997653 3345568899999999999999997 5 7999999997
Q ss_pred cccCC--CcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCe
Q psy7538 177 CHPSE--KVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSI 253 (543)
Q Consensus 177 ~~~~~--~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~ 253 (543)
+++.. .+++|+....+..|. ....+.|+.||.++|+++..+.+ ++++++++||++
T Consensus 435 vyg~~~~~~~~E~~~~~~~~p~----------------------~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~ 492 (660)
T PRK08125 435 VYGMCTDKYFDEDTSNLIVGPI----------------------NKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFN 492 (660)
T ss_pred hcCCCCCCCcCccccccccCCC----------------------CCCccchHHHHHHHHHHHHHHHHhcCCceEEEEEce
Confidence 77642 346665332111100 00115899999999999999876 789999999999
Q ss_pred eeecCCCCCCCCCCCCCc-hHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCC
Q psy7538 254 VVPIYKEPLPGWTDNING-PTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNK 332 (543)
Q Consensus 254 V~G~~~~p~~gw~d~~~g-~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~ 332 (543)
|||+++.+....-....+ ...++..+..|....+.+++++.+|+|||+|+|++++.++.+... . ..+++||++++
T Consensus 493 vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~~~l~~~~~-~--~~g~iyni~~~- 568 (660)
T PRK08125 493 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEALFRIIENKDN-R--CDGQIINIGNP- 568 (660)
T ss_pred eeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHHHHHHHhcccc-c--cCCeEEEcCCC-
Confidence 999976431110000011 123556666676666788999999999999999999999876421 0 13679999987
Q ss_pred CC-cccHHHHHHHHhhhhcC
Q psy7538 333 DY-KITWQEICDIGKDIVTS 351 (543)
Q Consensus 333 ~~-~~t~~e~~~~i~~~~G~ 351 (543)
+ ++|++|+++.+.+..|.
T Consensus 569 -~~~~s~~el~~~i~~~~g~ 587 (660)
T PRK08125 569 -DNEASIRELAEMLLASFEK 587 (660)
T ss_pred -CCceeHHHHHHHHHHHhcc
Confidence 4 69999999999999854
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-32 Score=282.88 Aligned_cols=254 Identities=20% Similarity=0.248 Sum_probs=190.4
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
++|+|+|||||||||++|++.|++.|+ +|.++.|...... +.....+.++.+|++
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~---~V~~v~r~~~~~~----------------------~~~~~~~~~~~~Dl~ 74 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAEGH---YIIASDWKKNEHM----------------------SEDMFCHEFHLVDLR 74 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhCCC---EEEEEEecccccc----------------------ccccccceEEECCCC
Confidence 679999999999999999999999987 7888888643210 111113567889999
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCccCC---C-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCc-
Q psy7538 109 QLKLGISEIDKKELIDNVDIVYHVAATIR---F-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKV- 183 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~vd~ViH~AA~v~---~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~- 183 (543)
+.+ .+..+++++|+|||+||.+. + ..........|+.|+.+++++|++. ++++|||+||..+++....
T Consensus 75 d~~------~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~-~vk~~V~~SS~~vYg~~~~~ 147 (370)
T PLN02695 75 VME------NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARIN-GVKRFFYASSACIYPEFKQL 147 (370)
T ss_pred CHH------HHHHHHhCCCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHh-CCCEEEEeCchhhcCCcccc
Confidence 764 67777889999999998753 1 1233456788999999999999987 8999999999976664321
Q ss_pred -----ccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeec
Q psy7538 184 -----LEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPI 257 (543)
Q Consensus 184 -----i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~ 257 (543)
+.|+.. .|..|. +.|+.+|..+|+++..+.. .+++++++||+.|||+
T Consensus 148 ~~~~~~~E~~~-~p~~p~--------------------------s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp 200 (370)
T PLN02695 148 ETNVSLKESDA-WPAEPQ--------------------------DAYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGP 200 (370)
T ss_pred CcCCCcCcccC-CCCCCC--------------------------CHHHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCC
Confidence 223210 112111 7999999999999998776 6999999999999998
Q ss_pred CCCCCCCCCCC-CCchHHHHHHHhc-CceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCc
Q psy7538 258 YKEPLPGWTDN-INGPTGLLIGAGK-GVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYK 335 (543)
Q Consensus 258 ~~~p~~gw~d~-~~g~~~~~~~~~~-g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~ 335 (543)
.... -.+ ...+..++..+.+ +....+++++++.+|+||++|++++++.++... . +++||++++ ++
T Consensus 201 ~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~~~~-~------~~~~nv~~~--~~ 267 (370)
T PLN02695 201 FGTW----KGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRLTKSD-F------REPVNIGSD--EM 267 (370)
T ss_pred CCCc----cccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHHHhcc-C------CCceEecCC--Cc
Confidence 6432 111 1123445555544 345567889999999999999999998876542 2 468999998 89
Q ss_pred ccHHHHHHHHhhhhcCccC
Q psy7538 336 ITWQEICDIGKDIVTSKIP 354 (543)
Q Consensus 336 ~t~~e~~~~i~~~~G~~~p 354 (543)
+|++|+++.+.+..|.+.+
T Consensus 268 ~s~~el~~~i~~~~g~~~~ 286 (370)
T PLN02695 268 VSMNEMAEIALSFENKKLP 286 (370)
T ss_pred eeHHHHHHHHHHHhCCCCC
Confidence 9999999999998865443
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-32 Score=275.46 Aligned_cols=257 Identities=16% Similarity=0.222 Sum_probs=186.6
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
++|+|||||||||||++|+++|++.|+ +|++++|+..... ....+ ... ....++++++.+|++
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~---~V~~~~r~~~~~~---~~~~~---------~~~--~~~~~~~~~~~~Dl~ 65 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGY---TVKATVRDPNDPK---KTEHL---------LAL--DGAKERLHLFKANLL 65 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCC---EEEEEEcCCCchh---hHHHH---------Hhc--cCCCCceEEEecccc
Confidence 478999999999999999999999987 7888888753211 11111 000 111247889999999
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCccCCC--cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCcc--ccCC---
Q psy7538 109 QLKLGISEIDKKELIDNVDIVYHVAATIRF--DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYC--HPSE--- 181 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~vd~ViH~AA~v~~--~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~--~~~~--- 181 (543)
+++ ++..+++++|+|||+||.... ..+....+++|+.|+.+++++|++..++++||++||+.+ ++..
T Consensus 66 ~~~------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~ 139 (322)
T PLN02662 66 EEG------SFDSVVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLT 139 (322)
T ss_pred Ccc------hHHHHHcCCCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCC
Confidence 986 688899999999999997643 233347889999999999999988657899999999743 3321
Q ss_pred --CcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecC
Q psy7538 182 --KVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIY 258 (543)
Q Consensus 182 --~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~ 258 (543)
.+++|+....|. .....++.|+.||.++|+++..+.+ ++++++++||+.|||+.
T Consensus 140 ~~~~~~E~~~~~p~-----------------------~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~ 196 (322)
T PLN02662 140 PDVVVDETWFSDPA-----------------------FCEESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPL 196 (322)
T ss_pred CCCcCCcccCCChh-----------------------HhhcccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCC
Confidence 134554322111 0111226899999999999988776 69999999999999997
Q ss_pred CCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccH
Q psy7538 259 KEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITW 338 (543)
Q Consensus 259 ~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~ 338 (543)
..|.. ......+..+..|.. ..+++.+|+|||+|+|++++.++..... ...||++ + .++++
T Consensus 197 ~~~~~------~~~~~~~~~~~~~~~----~~~~~~~~~i~v~Dva~a~~~~~~~~~~------~~~~~~~-g--~~~s~ 257 (322)
T PLN02662 197 LQPTL------NTSAEAILNLINGAQ----TFPNASYRWVDVRDVANAHIQAFEIPSA------SGRYCLV-E--RVVHY 257 (322)
T ss_pred CCCCC------CchHHHHHHHhcCCc----cCCCCCcCeEEHHHHHHHHHHHhcCcCc------CCcEEEe-C--CCCCH
Confidence 65421 112233444444542 1245779999999999999999876543 3478886 4 57999
Q ss_pred HHHHHHHhhhhc
Q psy7538 339 QEICDIGKDIVT 350 (543)
Q Consensus 339 ~e~~~~i~~~~G 350 (543)
+|+++.+.+..+
T Consensus 258 ~e~~~~i~~~~~ 269 (322)
T PLN02662 258 SEVVKILHELYP 269 (322)
T ss_pred HHHHHHHHHHCC
Confidence 999999999873
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-31 Score=277.56 Aligned_cols=261 Identities=17% Similarity=0.187 Sum_probs=191.7
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
|.+||+|||||||||||+++++.|++.|+ +|++++|........ ... + . ...++.++.+|
T Consensus 1 ~~~~k~ilItGatG~IG~~l~~~L~~~G~---~V~~~~r~~~~~~~~--~~~---------~-----~-~~~~~~~~~~D 60 (349)
T TIGR02622 1 FWQGKKVLVTGHTGFKGSWLSLWLLELGA---EVYGYSLDPPTSPNL--FEL---------L-----N-LAKKIEDHFGD 60 (349)
T ss_pred CcCCCEEEEECCCChhHHHHHHHHHHCCC---EEEEEeCCCccchhH--HHH---------H-----h-hcCCceEEEcc
Confidence 67899999999999999999999999987 788888876432111 000 0 0 11357788999
Q ss_pred CCCCCCCCCHHHHHHHhcC--ccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC
Q psy7538 107 ITQLKLGISEIDKKELIDN--VDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE 181 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~~--vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~ 181 (543)
+++++ ++..++++ +|+|||+||..... +.....+++|+.|+.+++++|++.+.+++||++||+.+++..
T Consensus 61 l~~~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~ 134 (349)
T TIGR02622 61 IRDAA------KLRKAIAEFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRND 134 (349)
T ss_pred CCCHH------HHHHHHhhcCCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCC
Confidence 99875 78888774 69999999965332 344568899999999999999987437899999998666542
Q ss_pred ---CcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-c-------CCcEEEEe
Q psy7538 182 ---KVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-L-------GMPCMILR 250 (543)
Q Consensus 182 ---~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~-------~lp~~IlR 250 (543)
.+++|+....|. ++|+.||..+|.+++.++. . +++++++|
T Consensus 135 ~~~~~~~e~~~~~p~-----------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR 185 (349)
T TIGR02622 135 EWVWGYRETDPLGGH-----------------------------DPYSSSKACAELVIASYRSSFFGVANFHGIKIASAR 185 (349)
T ss_pred CCCCCCccCCCCCCC-----------------------------CcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEc
Confidence 234444322222 7899999999999987754 2 89999999
Q ss_pred cCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeec
Q psy7538 251 PSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTS 330 (543)
Q Consensus 251 ps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s 330 (543)
|+.|||++... + . .-...++..+..|.... .+++++.+||+||||+|++++.++.+... .....+++||+++
T Consensus 186 ~~~vyGp~~~~-~----~-~~~~~~~~~~~~g~~~~-~~~g~~~rd~i~v~D~a~a~~~~~~~~~~-~~~~~~~~yni~s 257 (349)
T TIGR02622 186 AGNVIGGGDWA-E----D-RLIPDVIRAFSSNKIVI-IRNPDATRPWQHVLEPLSGYLLLAEKLFT-GQAEFAGAWNFGP 257 (349)
T ss_pred cCcccCCCcch-h----h-hhhHHHHHHHhcCCCeE-ECCCCcccceeeHHHHHHHHHHHHHHHhh-cCccccceeeeCC
Confidence 99999986421 0 0 11124556666676554 46789999999999999999988865321 1001256999998
Q ss_pred CCCCcccHHHHHHHHhhhhc
Q psy7538 331 NKDYKITWQEICDIGKDIVT 350 (543)
Q Consensus 331 ~~~~~~t~~e~~~~i~~~~G 350 (543)
+..++.+..++++.+.+..+
T Consensus 258 ~~~~~~s~~~~~~~i~~~~~ 277 (349)
T TIGR02622 258 RASDNARVVELVVDALEFWW 277 (349)
T ss_pred CcccCcCHHHHHHHHHHHhc
Confidence 53368999999999988763
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >KOG0747|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-33 Score=261.22 Aligned_cols=311 Identities=20% Similarity=0.230 Sum_probs=221.8
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
|+.++|+||||.||||++.+..+...-|+.+.| .+..-.-... ..-+++ ....++..++.+|+
T Consensus 4 ~~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v-~idkL~~~s~-~~~l~~---------------~~n~p~ykfv~~di 66 (331)
T KOG0747|consen 4 YKEKNVLITGGAGFIGSNFINYLVDKYPDYKFV-NLDKLDYCSN-LKNLEP---------------VRNSPNYKFVEGDI 66 (331)
T ss_pred CccceEEEecCcCcchhhhhhhcccCCCCCcEE-EEeecccccc-cchhhh---------------hccCCCceEeeccc
Confidence 445899999999999999999999987776444 3332211111 111111 12346788999999
Q ss_pred CCCCCCCCHHHHHHHh--cCccEEEEcCccCCCccc---HHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC-
Q psy7538 108 TQLKLGISEIDKKELI--DNVDIVYHVAATIRFDEP---IKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE- 181 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~--~~vd~ViH~AA~v~~~~~---~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~- 181 (543)
.+.. .+..++ +++|.|+|.||....+.. .-.+...|+.+|..|++.++..+++++|||+||..++++.
T Consensus 67 ~~~~------~~~~~~~~~~id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~ 140 (331)
T KOG0747|consen 67 ADAD------LVLYLFETEEIDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSD 140 (331)
T ss_pred cchH------HHHhhhccCchhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCcc
Confidence 9875 344444 369999999998765433 2356788999999999999999999999999999555543
Q ss_pred -Cccc-ccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecC
Q psy7538 182 -KVLE-ERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIY 258 (543)
Q Consensus 182 -~~i~-E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~ 258 (543)
.... |...+.|. |+|+.||++||++++.+.. +++|++++|.++||||.
T Consensus 141 ~~~~~~E~s~~nPt-----------------------------npyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~ 191 (331)
T KOG0747|consen 141 EDAVVGEASLLNPT-----------------------------NPYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPN 191 (331)
T ss_pred ccccccccccCCCC-----------------------------CchHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCC
Confidence 3333 66555554 8999999999999999998 89999999999999998
Q ss_pred CCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccH
Q psy7538 259 KEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITW 338 (543)
Q Consensus 259 ~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~ 338 (543)
+-|.- -.-.++.....+...+++|+|.+.++++||+|+++|+.+++.+... |+|||+++. .+.+.
T Consensus 192 q~~~k-------lipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~Kg~~------geIYNIgtd--~e~~~ 256 (331)
T KOG0747|consen 192 QYPEK-------LIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEKGEL------GEIYNIGTD--DEMRV 256 (331)
T ss_pred cChHH-------HhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhcCCc------cceeeccCc--chhhH
Confidence 75411 0113555566777788999999999999999999999999888443 899999998 89999
Q ss_pred HHHHHHHhhhhcCccCCCCccccCccccccchhHHHHHHHHHhhhHHHHH-HHHHHHhCCCchhhHHHHHHHHhhccccc
Q psy7538 339 QEICDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFICCLLFHWIPAYFL-DAVILISGNKPCLVRIQERIHRGFDVFEY 417 (543)
Q Consensus 339 ~e~~~~i~~~~G~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~-d~~~~~~G~kP~~~~~~~~l~~~~~~~~~ 417 (543)
.|+++.+.+.++.+.|- ...-|......++..+.. .+.+ +--.+.+||+|... ..+.+++ +++|
T Consensus 257 ~~l~k~i~eli~~~~~~--~~~~p~~~~v~dRp~nd~---------Ry~~~~eKik~LGw~~~~p-~~eGLrk---tie~ 321 (331)
T KOG0747|consen 257 IDLAKDICELFEKRLPN--IDTEPFIFFVEDRPYNDL---------RYFLDDEKIKKLGWRPTTP-WEEGLRK---TIEW 321 (331)
T ss_pred HHHHHHHHHHHHHhccC--CCCCCcceecCCCCcccc---------cccccHHHHHhcCCcccCc-HHHHHHH---HHHH
Confidence 99999999988544331 111122222222222111 1112 22245999999987 5555544 4455
Q ss_pred ccc
Q psy7538 418 YAN 420 (543)
Q Consensus 418 f~~ 420 (543)
|..
T Consensus 322 y~~ 324 (331)
T KOG0747|consen 322 YTK 324 (331)
T ss_pred HHh
Confidence 543
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-31 Score=274.47 Aligned_cols=256 Identities=18% Similarity=0.263 Sum_probs=189.1
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
.||+|||||||||||++++++|++.|+ +|++++|+.... +++..+... .....+++++.+|++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~---~~~~~~~~~-----------~~~~~~~~~~~~Dl~ 66 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGY---TVKATVRDLTDR---KKTEHLLAL-----------DGAKERLKLFKADLL 66 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEECCCcch---HHHHHHHhc-----------cCCCCceEEEecCCC
Confidence 478999999999999999999999987 788889876432 222222110 111247889999999
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCccCCCc--ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccc--cCC---
Q psy7538 109 QLKLGISEIDKKELIDNVDIVYHVAATIRFD--EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCH--PSE--- 181 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~--~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~--~~~--- 181 (543)
+++ .+..+++++|+|||+||.+... ++....+++|+.||.+++++|++.+++++|||+||..++ +..
T Consensus 67 ~~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~ 140 (322)
T PLN02986 67 EES------SFEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIE 140 (322)
T ss_pred Ccc------hHHHHHhCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCC
Confidence 986 7889999999999999976432 333457899999999999999986578999999998543 211
Q ss_pred --CcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecC
Q psy7538 182 --KVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIY 258 (543)
Q Consensus 182 --~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~ 258 (543)
..++|+.+..|. ......+.|+.||.++|++++.+.+ ++++++++||+.|||+.
T Consensus 141 ~~~~~~E~~~~~p~-----------------------~~~~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~ 197 (322)
T PLN02986 141 ANDVVDETFFSDPS-----------------------LCRETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPL 197 (322)
T ss_pred CCCCcCcccCCChH-----------------------HhhccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCC
Confidence 124444322211 0011227899999999999999877 69999999999999997
Q ss_pred CCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccH
Q psy7538 259 KEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITW 338 (543)
Q Consensus 259 ~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~ 338 (543)
..|.. + ....++..+..|... . +.+.+++|||+|+|++++.++..+.. +++||++ + .++|+
T Consensus 198 ~~~~~----~--~~~~~~~~~~~g~~~--~--~~~~~~~v~v~Dva~a~~~al~~~~~------~~~yni~-~--~~~s~ 258 (322)
T PLN02986 198 LQPTL----N--FSVELIVDFINGKNL--F--NNRFYRFVDVRDVALAHIKALETPSA------NGRYIID-G--PIMSV 258 (322)
T ss_pred CCCCC----C--ccHHHHHHHHcCCCC--C--CCcCcceeEHHHHHHHHHHHhcCccc------CCcEEEe-c--CCCCH
Confidence 65421 1 112345555555432 2 35678999999999999999987543 3489994 5 57999
Q ss_pred HHHHHHHhhhh
Q psy7538 339 QEICDIGKDIV 349 (543)
Q Consensus 339 ~e~~~~i~~~~ 349 (543)
+|+++.+.+.+
T Consensus 259 ~e~~~~i~~~~ 269 (322)
T PLN02986 259 NDIIDILRELF 269 (322)
T ss_pred HHHHHHHHHHC
Confidence 99999999998
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-31 Score=275.37 Aligned_cols=253 Identities=17% Similarity=0.218 Sum_probs=185.7
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
++|+|||||||||||++|+++|++.|+ +|.+++|+..... ...+..+ .....+++++.+|++
T Consensus 9 ~~~~vlVTGatGfIG~~l~~~L~~~G~---~V~~~~r~~~~~~-~~~~~~~--------------~~~~~~~~~~~~Dl~ 70 (342)
T PLN02214 9 AGKTVCVTGAGGYIASWIVKILLERGY---TVKGTVRNPDDPK-NTHLREL--------------EGGKERLILCKADLQ 70 (342)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcC---EEEEEeCCchhhh-HHHHHHh--------------hCCCCcEEEEecCcC
Confidence 678999999999999999999999987 7888998753211 0111111 111236888999999
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecC-ccccC--C---C
Q psy7538 109 QLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTA-YCHPS--E---K 182 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~-y~~~~--~---~ 182 (543)
+++ ++..+++++|+|||+||... ......+++|+.||.+++++|++. ++++|||+||. .+++. . .
T Consensus 71 d~~------~~~~~~~~~d~Vih~A~~~~--~~~~~~~~~nv~gt~~ll~aa~~~-~v~r~V~~SS~~avyg~~~~~~~~ 141 (342)
T PLN02214 71 DYE------ALKAAIDGCDGVFHTASPVT--DDPEQMVEPAVNGAKFVINAAAEA-KVKRVVITSSIGAVYMDPNRDPEA 141 (342)
T ss_pred ChH------HHHHHHhcCCEEEEecCCCC--CCHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEeccceeeeccCCCCCCc
Confidence 876 78888999999999999763 345678999999999999999997 78999999996 33332 1 1
Q ss_pred cccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCCC
Q psy7538 183 VLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKEP 261 (543)
Q Consensus 183 ~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~p 261 (543)
.++|+.+++ .+. . ....+.|+.||..+|++++.+.+ .+++++++||++|||+...+
T Consensus 142 ~~~E~~~~~-~~~----------------~------~~p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~ 198 (342)
T PLN02214 142 VVDESCWSD-LDF----------------C------KNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQP 198 (342)
T ss_pred ccCcccCCC-hhh----------------c------cccccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCC
Confidence 355653211 000 0 01126899999999999998876 69999999999999997643
Q ss_pred CCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHH
Q psy7538 262 LPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEI 341 (543)
Q Consensus 262 ~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~ 341 (543)
. .......+.....|.... . ++..+|||||+|+|++++.++.+... ++.||++++ +.++.|+
T Consensus 199 ~------~~~~~~~~~~~~~g~~~~-~--~~~~~~~i~V~Dva~a~~~al~~~~~------~g~yn~~~~---~~~~~el 260 (342)
T PLN02214 199 T------INASLYHVLKYLTGSAKT-Y--ANLTQAYVDVRDVALAHVLVYEAPSA------SGRYLLAES---ARHRGEV 260 (342)
T ss_pred C------CCchHHHHHHHHcCCccc-C--CCCCcCeeEHHHHHHHHHHHHhCccc------CCcEEEecC---CCCHHHH
Confidence 1 111112222344454332 2 35678999999999999999977543 458999863 5799999
Q ss_pred HHHHhhhh
Q psy7538 342 CDIGKDIV 349 (543)
Q Consensus 342 ~~~i~~~~ 349 (543)
++.+.+.+
T Consensus 261 ~~~i~~~~ 268 (342)
T PLN02214 261 VEILAKLF 268 (342)
T ss_pred HHHHHHHC
Confidence 99999988
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-31 Score=275.94 Aligned_cols=260 Identities=17% Similarity=0.158 Sum_probs=191.2
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|||||||||||++|+++|++.|+ +|++++|...... .+++..+.+. +. .....+++++.+|+++.
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~---~V~~~~r~~~~~~-~~~~~~~~~~-----~~----~~~~~~~~~~~~Dl~d~ 67 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGY---EVHGLIRRSSSFN-TQRIEHIYED-----PH----NVNKARMKLHYGDLTDS 67 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCC---EEEEEecCCcccc-hhhhhhhhhc-----cc----cccccceeEEEeccCCH
Confidence 6899999999999999999999987 7888988764211 1233222110 00 01124688999999987
Q ss_pred CCCCCHHHHHHHhcC--ccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhccCC---ceEEEEecCccccCC-
Q psy7538 111 KLGISEIDKKELIDN--VDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMKNL---KCFTYISTAYCHPSE- 181 (543)
Q Consensus 111 ~lgls~~~~~~l~~~--vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l---~~~V~vST~y~~~~~- 181 (543)
+ .+..++++ +|+|||+||..... +......++|+.||.+++++|++. ++ ++|||+||..+++..
T Consensus 68 ~------~l~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~-~~~~~~~~v~~SS~~vyg~~~ 140 (343)
T TIGR01472 68 S------NLRRIIDEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTL-GLIKSVKFYQASTSELYGKVQ 140 (343)
T ss_pred H------HHHHHHHhCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHh-CCCcCeeEEEeccHHhhCCCC
Confidence 5 68888774 69999999976532 233456788999999999999987 54 489999999666543
Q ss_pred -CcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCC
Q psy7538 182 -KVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYK 259 (543)
Q Consensus 182 -~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~ 259 (543)
.+++|+....|. +.|+.||..+|.++..++. .++++++.|+.++||+..
T Consensus 141 ~~~~~E~~~~~p~-----------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~ 191 (343)
T TIGR01472 141 EIPQNETTPFYPR-----------------------------SPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRR 191 (343)
T ss_pred CCCCCCCCCCCCC-----------------------------ChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCC
Confidence 245565332222 7999999999999998876 689999999999999863
Q ss_pred CCCCCCCCCCCchHHHHHHHhcCc-eeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccH
Q psy7538 260 EPLPGWTDNINGPTGLLIGAGKGV-IRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITW 338 (543)
Q Consensus 260 ~p~~gw~d~~~g~~~~~~~~~~g~-~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~ 338 (543)
.. ..+. .....++..+..|. ...+.+++++.+||+||+|+|++++.++.+.. .++||++++ +++|+
T Consensus 192 ~~--~~~~--~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~~~~~~~~~-------~~~yni~~g--~~~s~ 258 (343)
T TIGR01472 192 GE--NFVT--RKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEAMWLMLQQDK-------PDDYVIATG--ETHSV 258 (343)
T ss_pred Cc--cccc--hHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHHHHHHHhcCC-------CccEEecCC--CceeH
Confidence 21 0010 11122344455564 33456889999999999999999998886532 348999999 89999
Q ss_pred HHHHHHHhhhhcCc
Q psy7538 339 QEICDIGKDIVTSK 352 (543)
Q Consensus 339 ~e~~~~i~~~~G~~ 352 (543)
.|+++.+.+.+|..
T Consensus 259 ~e~~~~i~~~~g~~ 272 (343)
T TIGR01472 259 REFVEVSFEYIGKT 272 (343)
T ss_pred HHHHHHHHHHcCCC
Confidence 99999999998643
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-31 Score=273.52 Aligned_cols=326 Identities=17% Similarity=0.173 Sum_probs=221.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCC-HHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKT-PNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~-~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
+++|+|+|||||||||++|+++|++.|+ +|+++.|...... ..+++.+.. .....++.++.+|
T Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~---~V~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~D 66 (352)
T PLN02240 3 LMGRTILVTGGAGYIGSHTVLQLLLAGY---KVVVIDNLDNSSEEALRRVKELA-------------GDLGDNLVFHKVD 66 (352)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCCcchHHHHHHHHHhh-------------cccCccceEEecC
Confidence 4678999999999999999999999986 7888887643211 112222110 1112467889999
Q ss_pred CCCCCCCCCHHHHHHHhc--CccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccC-
Q psy7538 107 ITQLKLGISEIDKKELID--NVDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPS- 180 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~--~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~- 180 (543)
+++++ ++..+++ ++|+|||+||..... ......+++|+.++.+++++|++. ++++||++||+.+++.
T Consensus 67 ~~~~~------~l~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~vyg~~ 139 (352)
T PLN02240 67 LRDKE------ALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKH-GCKKLVFSSSATVYGQP 139 (352)
T ss_pred cCCHH------HHHHHHHhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEccHHHhCCC
Confidence 99875 6777765 689999999975432 345668999999999999999987 7899999999865543
Q ss_pred -CCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh--cCCcEEEEecCeeeec
Q psy7538 181 -EKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME--LGMPCMILRPSIVVPI 257 (543)
Q Consensus 181 -~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~--~~lp~~IlRps~V~G~ 257 (543)
..+++|+....|. +.|+.+|..+|++++.+.. .+++++++|+++|||+
T Consensus 140 ~~~~~~E~~~~~~~-----------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~ 190 (352)
T PLN02240 140 EEVPCTEEFPLSAT-----------------------------NPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGA 190 (352)
T ss_pred CCCCCCCCCCCCCC-----------------------------CHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCC
Confidence 3356665332222 7999999999999987754 4789999999999997
Q ss_pred CCCCCCCCCCC-C-CchHHHHHHHhcCc--eeEEee------cCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEE
Q psy7538 258 YKEPLPGWTDN-I-NGPTGLLIGAGKGV--IRSMYC------KNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCN 327 (543)
Q Consensus 258 ~~~p~~gw~d~-~-~g~~~~~~~~~~g~--~~~~~~------~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyn 327 (543)
+....-|.-.+ . .+...++..+..+. ...+.+ ++.+.+++||++|+|++++.++..... .....+++||
T Consensus 191 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~D~a~a~~~a~~~~~~-~~~~~~~~yn 269 (352)
T PLN02240 191 HPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVRDYIHVMDLADGHIAALRKLFT-DPDIGCEAYN 269 (352)
T ss_pred CccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEEeeEEHHHHHHHHHHHHhhhhh-ccCCCCceEE
Confidence 64321111000 0 11122344444443 223343 678999999999999999988865311 1112357999
Q ss_pred eecCCCCcccHHHHHHHHhhhhcCccCCCCccccCccccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHH
Q psy7538 328 LTSNKDYKITWQEICDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFICCLLFHWIPAYFLDAVILISGNKPCLVRIQER 407 (543)
Q Consensus 328 i~s~~~~~~t~~e~~~~i~~~~G~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~d~~~~~~G~kP~~~~~~~~ 407 (543)
++++ +++|++|+++.+.+.+|.+.+.......+.. .. ......+.+.+.+||+|+.. +.+.
T Consensus 270 i~~~--~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~----~~------------~~~~d~~k~~~~lg~~p~~~-l~~~ 330 (352)
T PLN02240 270 LGTG--KGTSVLEMVAAFEKASGKKIPLKLAPRRPGD----AE------------EVYASTEKAEKELGWKAKYG-IDEM 330 (352)
T ss_pred ccCC--CcEeHHHHHHHHHHHhCCCCCceeCCCCCCC----hh------------hhhcCHHHHHHHhCCCCCCC-HHHH
Confidence 9998 8999999999999999654443222111111 00 00112445678899999874 3333
Q ss_pred HHHhhccccccccCeEEEeCc
Q psy7538 408 IHRGFDVFEYYANNEWEFKNG 428 (543)
Q Consensus 408 l~~~~~~~~~f~~~~w~f~~~ 428 (543)
+. ++++|+..+.|.|.+.
T Consensus 331 l~---~~~~~~~~~~~~~~~~ 348 (352)
T PLN02240 331 CR---DQWNWASKNPYGYGSS 348 (352)
T ss_pred HH---HHHHHHHhCccccCCC
Confidence 33 5677888888877653
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-31 Score=271.23 Aligned_cols=307 Identities=20% Similarity=0.254 Sum_probs=215.5
Q ss_pred EEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCCC
Q psy7538 32 SIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQLK 111 (543)
Q Consensus 32 ~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~~ 111 (543)
+|+|||||||||++|+++|++.|++. +|.++.|...... .++++++ . ...+++++.+|+++++
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~-~v~~~~~~~~~~~-~~~~~~~--------------~-~~~~~~~~~~Dl~~~~ 63 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDA-EVIVLDKLTYAGN-LENLADL--------------E-DNPRYRFVKGDIGDRE 63 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCC-EEEEecCCCcchh-hhhhhhh--------------c-cCCCcEEEEcCCcCHH
Confidence 58999999999999999999987543 7888876432111 1222221 1 1136788999999876
Q ss_pred CCCCHHHHHHHhcC--ccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCC---c
Q psy7538 112 LGISEIDKKELIDN--VDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEK---V 183 (543)
Q Consensus 112 lgls~~~~~~l~~~--vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~---~ 183 (543)
++..++++ +|+|||+||....+ +..+..+++|+.|+.+++++|++...-.++||+||..+++... +
T Consensus 64 ------~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~ 137 (317)
T TIGR01181 64 ------LVSRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDA 137 (317)
T ss_pred ------HHHHHHhhcCCCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCC
Confidence 78888887 99999999976543 3456688999999999999999862223899999986665432 3
Q ss_pred ccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCCCC
Q psy7538 184 LEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKEPL 262 (543)
Q Consensus 184 i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~p~ 262 (543)
+.|.....|. +.|+.+|..+|.++..+.. .+++++++||+.|||+...+.
T Consensus 138 ~~e~~~~~~~-----------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~ 188 (317)
T TIGR01181 138 FTETTPLAPS-----------------------------SPYSASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQFPE 188 (317)
T ss_pred cCCCCCCCCC-----------------------------CchHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcc
Confidence 4444322221 7899999999999988765 689999999999999865321
Q ss_pred CCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHH
Q psy7538 263 PGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEIC 342 (543)
Q Consensus 263 ~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~ 342 (543)
. -...++..+..|....+.+++++.+++||+||+|+++..++.+.. .+++||++++ +++++.|++
T Consensus 189 -----~--~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~~------~~~~~~~~~~--~~~s~~~~~ 253 (317)
T TIGR01181 189 -----K--LIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKGR------VGETYNIGGG--NERTNLEVV 253 (317)
T ss_pred -----c--HHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcCCC------CCceEEeCCC--CceeHHHHH
Confidence 1 112355666667666677889999999999999999998886543 3679999998 889999999
Q ss_pred HHHhhhhcCccCCCCccccCccccccchhHHHHHHHHHhhhH-HHHHHHHHHHhCCCchhhHHHHHHHHhhccccccccC
Q psy7538 343 DIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFICCLLFHWIP-AYFLDAVILISGNKPCLVRIQERIHRGFDVFEYYANN 421 (543)
Q Consensus 343 ~~i~~~~G~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~p-~~~~d~~~~~~G~kP~~~~~~~~l~~~~~~~~~f~~~ 421 (543)
+.+.+.+|...+. ..+.+... ... .+ ....+.+.+.+||+|+.. +.+.+. ++++||..+
T Consensus 254 ~~i~~~~~~~~~~--~~~~~~~~-~~~-------------~~~~~~~~k~~~~lG~~p~~~-~~~~i~---~~~~~~~~~ 313 (317)
T TIGR01181 254 ETILELLGKDEDL--ITHVEDRP-GHD-------------RRYAIDASKIKRELGWAPKYT-FEEGLR---KTVQWYLDN 313 (317)
T ss_pred HHHHHHhCCCccc--ccccCCCc-cch-------------hhhcCCHHHHHHHhCCCCCCc-HHHHHH---HHHHHHHhc
Confidence 9999999532221 11111000 000 00 122455667899999875 444444 445677777
Q ss_pred eEEE
Q psy7538 422 EWEF 425 (543)
Q Consensus 422 ~w~f 425 (543)
.|.|
T Consensus 314 ~~~~ 317 (317)
T TIGR01181 314 EWWW 317 (317)
T ss_pred cCCC
Confidence 6643
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-31 Score=277.54 Aligned_cols=254 Identities=18% Similarity=0.221 Sum_probs=187.0
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|||||||||||++|+++|++.|++ .|+++.|...... .+++..+ ....+++++.+|+++.
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~--~v~~~~~~~~~~~-~~~~~~~---------------~~~~~~~~~~~Dl~d~ 62 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQD--SVVNVDKLTYAGN-LESLADV---------------SDSERYVFEHADICDR 62 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCC--eEEEecCCCccch-HHHHHhc---------------ccCCceEEEEecCCCH
Confidence 58999999999999999999999863 3555544321111 1111111 0123578899999987
Q ss_pred CCCCCHHHHHHHhc--CccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhc--------cCCceEEEEecCcc
Q psy7538 111 KLGISEIDKKELID--NVDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQM--------KNLKCFTYISTAYC 177 (543)
Q Consensus 111 ~lgls~~~~~~l~~--~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~--------~~l~~~V~vST~y~ 177 (543)
+ ++..+++ ++|+|||+||.+... ...+..+++|+.|+.+++++|++. +++++|||+||.++
T Consensus 63 ~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~v 136 (352)
T PRK10084 63 A------ELDRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEV 136 (352)
T ss_pred H------HHHHHHHhcCCCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhh
Confidence 5 7777776 489999999976532 335678999999999999999874 24679999999866
Q ss_pred ccCCC------------cccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCC
Q psy7538 178 HPSEK------------VLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGM 244 (543)
Q Consensus 178 ~~~~~------------~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~l 244 (543)
++... +++|+... .| -+.|+.||..+|+++..+++ +++
T Consensus 137 yg~~~~~~~~~~~~~~~~~~E~~~~-----------------------~p------~~~Y~~sK~~~E~~~~~~~~~~g~ 187 (352)
T PRK10084 137 YGDLPHPDEVENSEELPLFTETTAY-----------------------AP------SSPYSASKASSDHLVRAWLRTYGL 187 (352)
T ss_pred cCCCCccccccccccCCCccccCCC-----------------------CC------CChhHHHHHHHHHHHHHHHHHhCC
Confidence 65421 12222111 11 17999999999999998866 689
Q ss_pred cEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCc
Q psy7538 245 PCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKS 324 (543)
Q Consensus 245 p~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~ 324 (543)
+++++||+.|||+...+. .....++..+..|....+++++++.+|+|||+|+|++++.++.... .++
T Consensus 188 ~~vilr~~~v~Gp~~~~~-------~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~a~~~~l~~~~------~~~ 254 (352)
T PRK10084 188 PTIVTNCSNNYGPYHFPE-------KLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALYKVVTEGK------AGE 254 (352)
T ss_pred CEEEEeccceeCCCcCcc-------chHHHHHHHHhcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHhcCC------CCc
Confidence 999999999999975320 0112344555566655678889999999999999999998886533 267
Q ss_pred EEEeecCCCCcccHHHHHHHHhhhhcCc
Q psy7538 325 VCNLTSNKDYKITWQEICDIGKDIVTSK 352 (543)
Q Consensus 325 vyni~s~~~~~~t~~e~~~~i~~~~G~~ 352 (543)
+||++++ +++++.++++.+++..|..
T Consensus 255 ~yni~~~--~~~s~~~~~~~i~~~~~~~ 280 (352)
T PRK10084 255 TYNIGGH--NEKKNLDVVLTICDLLDEI 280 (352)
T ss_pred eEEeCCC--CcCcHHHHHHHHHHHhccc
Confidence 9999998 8899999999999998543
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-31 Score=276.92 Aligned_cols=259 Identities=17% Similarity=0.235 Sum_probs=180.3
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
..|+|||||||||||++|+++|++.|+ +|++++|..... +++..+... +....++.++.+|++
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~---~V~~~~r~~~~~---~~~~~~~~~-----------~~~~~~~~~v~~Dl~ 66 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGY---TVRATVRDPANV---KKVKHLLDL-----------PGATTRLTLWKADLA 66 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCC---EEEEEEcCcchh---HHHHHHHhc-----------cCCCCceEEEEecCC
Confidence 357999999999999999999999987 788888865321 122111100 111236889999999
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCccCCCc--ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC---Cc
Q psy7538 109 QLKLGISEIDKKELIDNVDIVYHVAATIRFD--EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE---KV 183 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~--~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~---~~ 183 (543)
+++ .+..+++++|+|||+||..... .+....+++|+.||.+++++|++.+.+++|||+||+.++... .+
T Consensus 67 d~~------~~~~~~~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~ 140 (351)
T PLN02650 67 VEG------SFDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKP 140 (351)
T ss_pred Chh------hHHHHHhCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCC
Confidence 886 6888889999999999976532 233467899999999999999987447899999998544321 12
Q ss_pred -ccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCCC
Q psy7538 184 -LEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKEP 261 (543)
Q Consensus 184 -i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~p 261 (543)
++|+.... .+. +.......+.|+.||..+|+++..+.+ ++++++++||++|||+...+
T Consensus 141 ~~~E~~~~~-~~~-------------------~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~ 200 (351)
T PLN02650 141 VYDEDCWSD-LDF-------------------CRRKKMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFIST 200 (351)
T ss_pred ccCcccCCc-hhh-------------------hhccccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCC
Confidence 34442110 000 000000115899999999999999887 79999999999999997643
Q ss_pred CCCCCCCCCchHHHHHH--HhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHH
Q psy7538 262 LPGWTDNINGPTGLLIG--AGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQ 339 (543)
Q Consensus 262 ~~gw~d~~~g~~~~~~~--~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~ 339 (543)
. .+..++.. ...|.... .+. ...+|||||+|+|++++.++..... +.+| ++++ .++++.
T Consensus 201 ~--------~~~~~~~~~~~~~~~~~~-~~~-~~~r~~v~V~Dva~a~~~~l~~~~~------~~~~-i~~~--~~~s~~ 261 (351)
T PLN02650 201 S--------MPPSLITALSLITGNEAH-YSI-IKQGQFVHLDDLCNAHIFLFEHPAA------EGRY-ICSS--HDATIH 261 (351)
T ss_pred C--------CCccHHHHHHHhcCCccc-cCc-CCCcceeeHHHHHHHHHHHhcCcCc------CceE-EecC--CCcCHH
Confidence 1 11112221 12232211 222 2347999999999999999876543 3478 4555 679999
Q ss_pred HHHHHHhhhh
Q psy7538 340 EICDIGKDIV 349 (543)
Q Consensus 340 e~~~~i~~~~ 349 (543)
|+++.+.+..
T Consensus 262 el~~~i~~~~ 271 (351)
T PLN02650 262 DLAKMLREKY 271 (351)
T ss_pred HHHHHHHHhC
Confidence 9999999987
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-31 Score=294.27 Aligned_cols=263 Identities=26% Similarity=0.359 Sum_probs=197.2
Q ss_pred CEEEEEcCcchhHHHHHHHHHh--hCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILR--LEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~--~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
|+|||||||||||++|+++|++ .|+ +|++++|+.. .+++..+.. .....+++++.+|++
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~---~V~~l~R~~~----~~~~~~~~~------------~~~~~~v~~~~~Dl~ 61 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREA---TVHVLVRRQS----LSRLEALAA------------YWGADRVVPLVGDLT 61 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCC---EEEEEECcch----HHHHHHHHH------------hcCCCcEEEEecccC
Confidence 5899999999999999999994 554 8999999542 233332211 011247899999999
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCC-ccccc
Q psy7538 109 QLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEK-VLEER 187 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~-~i~E~ 187 (543)
+++++++.++++.+ +++|+||||||..+.........++|+.||.+++++|++. ++++|||+||..+++... ..+|+
T Consensus 62 ~~~~~~~~~~~~~l-~~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~-~~~~~v~~SS~~v~g~~~~~~~e~ 139 (657)
T PRK07201 62 EPGLGLSEADIAEL-GDIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERL-QAATFHHVSSIAVAGDYEGVFRED 139 (657)
T ss_pred CccCCcCHHHHHHh-cCCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhc-CCCeEEEEeccccccCccCccccc
Confidence 99999999988888 8999999999988777777778999999999999999998 789999999997765432 23333
Q ss_pred ccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCCCCCC
Q psy7538 188 TYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPGWTD 267 (543)
Q Consensus 188 ~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~gw~d 267 (543)
..+.+ ...++.|+.||+.+|+++.+. . +++++|+||+.|||+... |..+
T Consensus 140 ~~~~~--------------------------~~~~~~Y~~sK~~~E~~~~~~-~-g~~~~ilRp~~v~G~~~~---g~~~ 188 (657)
T PRK07201 140 DFDEG--------------------------QGLPTPYHRTKFEAEKLVREE-C-GLPWRVYRPAVVVGDSRT---GEMD 188 (657)
T ss_pred cchhh--------------------------cCCCCchHHHHHHHHHHHHHc-C-CCcEEEEcCCeeeecCCC---Cccc
Confidence 22111 112378999999999999753 3 899999999999998653 3333
Q ss_pred CCCchHH---HHHHHhcC-ceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHHH
Q psy7538 268 NINGPTG---LLIGAGKG-VIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEICD 343 (543)
Q Consensus 268 ~~~g~~~---~~~~~~~g-~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~~ 343 (543)
+..++.. ++...... ....+.+.+....++|||||++++++.++..... .+++||++++ +++++.|+++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~ai~~~~~~~~~-----~g~~~ni~~~--~~~s~~el~~ 261 (657)
T PRK07201 189 KIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVADALDHLMHKDGR-----DGQTFHLTDP--KPQRVGDIYN 261 (657)
T ss_pred cCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHHHHHHHhcCcCC-----CCCEEEeCCC--CCCcHHHHHH
Confidence 4333322 22222111 1123345566778999999999999988765433 4789999998 8999999999
Q ss_pred HHhhhhcCc
Q psy7538 344 IGKDIVTSK 352 (543)
Q Consensus 344 ~i~~~~G~~ 352 (543)
.+.+.+|.+
T Consensus 262 ~i~~~~g~~ 270 (657)
T PRK07201 262 AFARAAGAP 270 (657)
T ss_pred HHHHHhCCC
Confidence 999999554
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-31 Score=269.36 Aligned_cols=257 Identities=16% Similarity=0.224 Sum_probs=187.4
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
.+|+||||||+||||++|+++|++.|+ +|++++|...... ....+.. . .....++.++.+|++
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~---~V~~~~r~~~~~~---~~~~~~~---------~--~~~~~~~~~~~~D~~ 66 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGY---TINATVRDPKDRK---KTDHLLA---------L--DGAKERLKLFKADLL 66 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCC---EEEEEEcCCcchh---hHHHHHh---------c--cCCCCceEEEeCCCC
Confidence 478999999999999999999999987 6777888754321 1111110 0 111246889999999
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccC-----
Q psy7538 109 QLKLGISEIDKKELIDNVDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPS----- 180 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~----- 180 (543)
+++ +++.+++++|+|||+||..... +.....+++|+.|+.+++++|.+..+.++||++||..++..
T Consensus 67 d~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~ 140 (325)
T PLN02989 67 DEG------SFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKL 140 (325)
T ss_pred Cch------HHHHHHcCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccC
Confidence 986 7888889999999999975432 34567889999999999999988545789999999855422
Q ss_pred --CCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeec
Q psy7538 181 --EKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPI 257 (543)
Q Consensus 181 --~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~ 257 (543)
..+++|+....|... ....+.|+.||..+|+++..+.+ ++++++++||++|||+
T Consensus 141 ~~~~~~~E~~~~~p~~~-----------------------~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp 197 (325)
T PLN02989 141 GPNDVVDETFFTNPSFA-----------------------EERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGP 197 (325)
T ss_pred CCCCccCcCCCCchhHh-----------------------cccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCC
Confidence 123556533322110 01126899999999999998877 6899999999999999
Q ss_pred CCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCccc
Q psy7538 258 YKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKIT 337 (543)
Q Consensus 258 ~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t 337 (543)
...|..+ ....++..+..|... .+ ...++|+||+|+|++++.++..... +++||++ + .++|
T Consensus 198 ~~~~~~~------~~~~~i~~~~~~~~~--~~--~~~r~~i~v~Dva~a~~~~l~~~~~------~~~~ni~-~--~~~s 258 (325)
T PLN02989 198 ILQPTLN------FSVAVIVELMKGKNP--FN--TTHHRFVDVRDVALAHVKALETPSA------NGRYIID-G--PVVT 258 (325)
T ss_pred CCCCCCC------chHHHHHHHHcCCCC--CC--CcCcCeeEHHHHHHHHHHHhcCccc------CceEEEe-c--CCCC
Confidence 8765211 112344455555432 22 3458999999999999999876543 4589995 5 5799
Q ss_pred HHHHHHHHhhhhc
Q psy7538 338 WQEICDIGKDIVT 350 (543)
Q Consensus 338 ~~e~~~~i~~~~G 350 (543)
++|+++.+.+.+|
T Consensus 259 ~~ei~~~i~~~~~ 271 (325)
T PLN02989 259 IKDIENVLREFFP 271 (325)
T ss_pred HHHHHHHHHHHCC
Confidence 9999999999984
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-32 Score=269.84 Aligned_cols=281 Identities=23% Similarity=0.315 Sum_probs=204.1
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhc-CchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFE-SPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~-~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
++||+||||||+|.+|+++||++-+ .+|+|++|.++.+.+.+||++.++ ...++ ....++|+++.||+++
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~--~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~-------e~~~~ri~vv~gDl~e 71 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSD--AKVICLVRAQSDEAALARLEKTFDLYRHWD-------ELSADRVEVVAGDLAE 71 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCC--CcEEEEEecCCHHHHHHHHHHHhhhhhhhh-------hhhcceEEEEeccccc
Confidence 5899999999999999999999844 599999999999999999998776 22222 3456799999999999
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCccccccc
Q psy7538 110 LKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTY 189 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i~E~~y 189 (543)
+++||++++++.+.+++|.|||+||.+++-.++.+....||.||.+++++|... +.|.|+|+||+.+......-..+.-
T Consensus 72 ~~lGL~~~~~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~g-k~Kp~~yVSsisv~~~~~~~~~~~~ 150 (382)
T COG3320 72 PDLGLSERTWQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATG-KPKPLHYVSSISVGETEYYSNFTVD 150 (382)
T ss_pred ccCCCCHHHHHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcC-CCceeEEEeeeeeccccccCCCccc
Confidence 999999999999999999999999999999999999999999999999999986 7899999999977554322111100
Q ss_pred CCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCCCCCCCC
Q psy7538 190 LPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPGWTDNI 269 (543)
Q Consensus 190 ~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~gw~d~~ 269 (543)
... ...+...-+.++++|+.||+.||.++++..+.|+|++|+||+.|.|.... |-....
T Consensus 151 ~~~------------------~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~t---G~~n~~ 209 (382)
T COG3320 151 FDE------------------ISPTRNVGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSRT---GALNTR 209 (382)
T ss_pred ccc------------------ccccccccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCcc---Cccccc
Confidence 000 00011112445689999999999999999888999999999999998773 221111
Q ss_pred CchHHHHHHHh-cCceeEEeecCCcccccchHHHHHHHHHHHhhhhccc------CCCCCCcEEEeecCCCCcccHHHHH
Q psy7538 270 NGPTGLLIGAG-KGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNS------KESERKSVCNLTSNKDYKITWQEIC 342 (543)
Q Consensus 270 ~g~~~~~~~~~-~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~------~~~~~~~vyni~s~~~~~~t~~e~~ 342 (543)
.....++..+. .|. ..+.....|.+|+|.+++++.......... .++.....|+ .......+...++.
T Consensus 210 D~~~Rlv~~~~~lg~----~P~~~~~~~~~p~~~v~~~v~~~~~~~~~~~~~l~~~~~~~f~~~~-~~~~~~~i~l~~~~ 284 (382)
T COG3320 210 DFLTRLVLGLLQLGI----APDSEYSLDMLPVDHVARAVVAPSVQVAEAIAALGAHSDIRFNQLH-MLTHPDEIGLDEYV 284 (382)
T ss_pred hHHHHHHHHHHHhCC----CCCcccchhhCccceeeEEeehhhhhHHHHHHHhccCccchhhhee-cccCCCccchhHHH
Confidence 12222333322 222 224466778888777777655544333200 0011223455 22333789999999
Q ss_pred HHHhh
Q psy7538 343 DIGKD 347 (543)
Q Consensus 343 ~~i~~ 347 (543)
++..+
T Consensus 285 ~w~~~ 289 (382)
T COG3320 285 DWLIS 289 (382)
T ss_pred HhHhh
Confidence 98877
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.1e-29 Score=263.55 Aligned_cols=278 Identities=22% Similarity=0.319 Sum_probs=199.6
Q ss_pred EEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCC-CCceEEEEccCCCC
Q psy7538 32 SIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSI-LQKIQVISGDITQL 110 (543)
Q Consensus 32 ~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~-~~~v~~i~gDl~~~ 110 (543)
+|||||||||||++|+++|+++|+.. +|++++|+.......+|+++.++.... .. ... ..+++++.||++++
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~-~V~~l~R~~~~~~~~~~l~~~~~~~~~-----~~-~~~~~~~v~~~~~D~~~~ 73 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQA-KVICLVRAASEEHAMERLREALRSYRL-----WQ-EDLARERIEVVAGDLSEP 73 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCC-EEEEEEccCCHHHHHHHHHHHHHHhCC-----CC-chhhhCCEEEEeCCcCcc
Confidence 58999999999999999999998533 899999987655455676554321100 00 011 15899999999999
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCC--cccccc
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEK--VLEERT 188 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~--~i~E~~ 188 (543)
.+|++.+++..+.+++|+|||+||.+++..++....++|+.|+.+++++|.+. +.++|||+||..+++... .+.|+.
T Consensus 74 ~~gl~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~-~~~~~v~iSS~~v~~~~~~~~~~~~~ 152 (367)
T TIGR01746 74 RLGLSDAEWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASG-RAKPLHYVSTISVLAAIDLSTVTEDD 152 (367)
T ss_pred cCCcCHHHHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhC-CCceEEEEccccccCCcCCCCccccc
Confidence 99999999999999999999999998887888888999999999999999997 778899999997765422 112211
Q ss_pred cCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCCCCCCC
Q psy7538 189 YLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPGWTDN 268 (543)
Q Consensus 189 y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~gw~d~ 268 (543)
...+ ......+.|+.||+.+|.++......|++++++||+.|+|+... |....
T Consensus 153 ~~~~------------------------~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~---g~~~~ 205 (367)
T TIGR01746 153 AIVT------------------------PPPGLAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYT---GAINS 205 (367)
T ss_pred cccc------------------------cccccCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCC---CCCCc
Confidence 0000 00112378999999999999887656899999999999997432 21111
Q ss_pred CCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHHHHHhhh
Q psy7538 269 INGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEICDIGKDI 348 (543)
Q Consensus 269 ~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~~~i~~~ 348 (543)
......++....... .++.......+++|+||++++++.++..... . ..+++||++++ +++++.|+++.+.+
T Consensus 206 ~~~~~~~~~~~~~~~--~~p~~~~~~~~~~~vddva~ai~~~~~~~~~-~--~~~~~~~v~~~--~~~s~~e~~~~i~~- 277 (367)
T TIGR01746 206 SDILWRMVKGCLALG--AYPDSPELTEDLTPVDYVARAIVALSSQPAA-S--AGGPVFHVVNP--EPVSLDEFLEWLER- 277 (367)
T ss_pred hhHHHHHHHHHHHhC--CCCCCCccccCcccHHHHHHHHHHHHhCCCc-c--cCCceEEecCC--CCCCHHHHHHHHHH-
Confidence 111111222222111 1122222467899999999999988765432 0 12679999998 89999999999998
Q ss_pred hcCc
Q psy7538 349 VTSK 352 (543)
Q Consensus 349 ~G~~ 352 (543)
.|..
T Consensus 278 ~g~~ 281 (367)
T TIGR01746 278 AGYN 281 (367)
T ss_pred cCCC
Confidence 6443
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.4e-30 Score=261.22 Aligned_cols=250 Identities=25% Similarity=0.329 Sum_probs=195.6
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|||||||||||++|+++|++.|+ +|+++.|...... ... ..+.++.+|+++.
T Consensus 1 ~~ILVtG~tGfiG~~l~~~L~~~g~---~V~~~~r~~~~~~----------------------~~~-~~~~~~~~d~~~~ 54 (314)
T COG0451 1 MRILVTGGAGFIGSHLVERLLAAGH---DVRGLDRLRDGLD----------------------PLL-SGVEFVVLDLTDR 54 (314)
T ss_pred CeEEEEcCcccHHHHHHHHHHhCCC---eEEEEeCCCcccc----------------------ccc-cccceeeecccch
Confidence 3599999999999999999999987 8899999764321 111 4678899999987
Q ss_pred CCCCCHHHHHHHhcCc-cEEEEcCccCCCccc----HHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC---C
Q psy7538 111 KLGISEIDKKELIDNV-DIVYHVAATIRFDEP----IKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE---K 182 (543)
Q Consensus 111 ~lgls~~~~~~l~~~v-d~ViH~AA~v~~~~~----~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~---~ 182 (543)
+ ....+.+++ |+|||+||....... .....++|+.||.+++++|++. ++++|||.||.+++... .
T Consensus 55 ~------~~~~~~~~~~d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~-~~~~~v~~ss~~~~~~~~~~~ 127 (314)
T COG0451 55 D------LVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAA-GVKRFVFASSVSVVYGDPPPL 127 (314)
T ss_pred H------HHHHHHhcCCCEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeCCCceECCCCCCC
Confidence 5 577777777 999999998865433 3458999999999999999995 89999998886554432 2
Q ss_pred cccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCCC
Q psy7538 183 VLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKEP 261 (543)
Q Consensus 183 ~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~p 261 (543)
+++|+. .|..|. +.|+.||.++|+.+..+.. ++++++++||+.|||+.+.+
T Consensus 128 ~~~E~~--~~~~p~--------------------------~~Yg~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~ 179 (314)
T COG0451 128 PIDEDL--GPPRPL--------------------------NPYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKP 179 (314)
T ss_pred Cccccc--CCCCCC--------------------------CHHHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCC
Confidence 566653 122111 5799999999999999886 68999999999999998765
Q ss_pred CCCCCCCCCchHHHHHHHhcCce-eEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCC-cccHH
Q psy7538 262 LPGWTDNINGPTGLLIGAGKGVI-RSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDY-KITWQ 339 (543)
Q Consensus 262 ~~gw~d~~~g~~~~~~~~~~g~~-~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~-~~t~~ 339 (543)
. .++ .....++....++.. ....+++...++++|++|++.+++.++..... . +||++++ . +.+.+
T Consensus 180 ~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~------~-~~ni~~~--~~~~~~~ 246 (314)
T COG0451 180 D---LSS-GVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDG------G-VFNIGSG--TAEITVR 246 (314)
T ss_pred C---CCc-CcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCCCC------c-EEEeCCC--CCcEEHH
Confidence 2 111 112234555666664 56677888999999999999999999988765 4 9999998 6 89999
Q ss_pred HHHHHHhhhhcCccC
Q psy7538 340 EICDIGKDIVTSKIP 354 (543)
Q Consensus 340 e~~~~i~~~~G~~~p 354 (543)
|+++.+.+..|...+
T Consensus 247 e~~~~~~~~~~~~~~ 261 (314)
T COG0451 247 ELAEAVAEAVGSKAP 261 (314)
T ss_pred HHHHHHHHHhCCCCc
Confidence 999999999966544
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-30 Score=261.40 Aligned_cols=225 Identities=20% Similarity=0.188 Sum_probs=173.5
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+||||||+||||++|+++|++.| +|+++.|... .+.+|++++
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g----~V~~~~~~~~---------------------------------~~~~Dl~d~ 43 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG----NLIALDVHST---------------------------------DYCGDFSNP 43 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC----CEEEeccccc---------------------------------cccCCCCCH
Confidence 589999999999999999999987 3677777421 235899887
Q ss_pred CCCCCHHHHHHHhc--CccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC--Cc
Q psy7538 111 KLGISEIDKKELID--NVDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE--KV 183 (543)
Q Consensus 111 ~lgls~~~~~~l~~--~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~--~~ 183 (543)
+ .+.++++ ++|+||||||....+ .....+.++|+.|+.+++++|++. +. +|||+||.++++.. .+
T Consensus 44 ~------~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~-g~-~~v~~Ss~~Vy~~~~~~p 115 (299)
T PRK09987 44 E------GVAETVRKIRPDVIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEV-GA-WVVHYSTDYVFPGTGDIP 115 (299)
T ss_pred H------HHHHHHHhcCCCEEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEccceEECCCCCCC
Confidence 5 6777777 589999999987643 334567899999999999999998 54 79999999887653 35
Q ss_pred ccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCC
Q psy7538 184 LEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLP 263 (543)
Q Consensus 184 i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~ 263 (543)
++|+..+.|. |.|+.||..+|+++..+. .+.+|+||++|||+...
T Consensus 116 ~~E~~~~~P~-----------------------------~~Yg~sK~~~E~~~~~~~---~~~~ilR~~~vyGp~~~--- 160 (299)
T PRK09987 116 WQETDATAPL-----------------------------NVYGETKLAGEKALQEHC---AKHLIFRTSWVYAGKGN--- 160 (299)
T ss_pred cCCCCCCCCC-----------------------------CHHHHHHHHHHHHHHHhC---CCEEEEecceecCCCCC---
Confidence 6676444443 899999999999998874 47899999999998532
Q ss_pred CCCCCCCchHHHHHHHhcCceeEEeec--CCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHH
Q psy7538 264 GWTDNINGPTGLLIGAGKGVIRSMYCK--NTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEI 341 (543)
Q Consensus 264 gw~d~~~g~~~~~~~~~~g~~~~~~~~--~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~ 341 (543)
++ ...++..+..+....+.++ ++...++..+||++.++..++..... +++||++++ +++|+.|+
T Consensus 161 ----~~--~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~~------~giyni~~~--~~~s~~e~ 226 (299)
T PRK09987 161 ----NF--AKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPEV------AGLYHLVAS--GTTTWHDY 226 (299)
T ss_pred ----CH--HHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCCC------CCeEEeeCC--CCccHHHH
Confidence 11 2335555566666666776 56666677788888888877654322 459999998 88999999
Q ss_pred HHHHhhhh
Q psy7538 342 CDIGKDIV 349 (543)
Q Consensus 342 ~~~i~~~~ 349 (543)
++.+.+..
T Consensus 227 ~~~i~~~~ 234 (299)
T PRK09987 227 AALVFEEA 234 (299)
T ss_pred HHHHHHHH
Confidence 99997754
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-30 Score=266.11 Aligned_cols=258 Identities=16% Similarity=0.107 Sum_probs=189.9
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
++|+|||||||||||++|+++|++.|+ +|+++.|...... .++++.+.. +. .....++.++.+|++
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~---~V~~~~r~~~~~~-~~~~~~~~~---------~~-~~~~~~~~~~~~Dl~ 70 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGY---EVHGIIRRSSNFN-TQRLDHIYI---------DP-HPNKARMKLHYGDLS 70 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCC---EEEEEeccccccc-ccchhhhcc---------cc-ccccCceEEEEecCC
Confidence 578999999999999999999999987 7888888754211 111211100 00 111246889999999
Q ss_pred CCCCCCCHHHHHHHhc--CccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhccCCc-----eEEEEecCccc
Q psy7538 109 QLKLGISEIDKKELID--NVDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMKNLK-----CFTYISTAYCH 178 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~--~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~-----~~V~vST~y~~ 178 (543)
+.+ ++..+++ ++|+|||+||..... +.....+++|+.||.+++++|++. +++ +||++||..++
T Consensus 71 d~~------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~-~~~~~~~~~~v~~Ss~~vy 143 (340)
T PLN02653 71 DAS------SLRRWLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLH-GQETGRQIKYYQAGSSEMY 143 (340)
T ss_pred CHH------HHHHHHHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHh-ccccccceeEEEeccHHHh
Confidence 875 6777776 479999999976432 334556799999999999999987 554 89999998666
Q ss_pred cCCC-cccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeee
Q psy7538 179 PSEK-VLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVP 256 (543)
Q Consensus 179 ~~~~-~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G 256 (543)
+... +++|+....|. +.|+.||..+|+++..++. ++++++..|+.++||
T Consensus 144 g~~~~~~~E~~~~~p~-----------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~g 194 (340)
T PLN02653 144 GSTPPPQSETTPFHPR-----------------------------SPYAVAKVAAHWYTVNYREAYGLFACNGILFNHES 194 (340)
T ss_pred CCCCCCCCCCCCCCCC-----------------------------ChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccC
Confidence 5432 45565332222 7999999999999998877 688899999999999
Q ss_pred cCCCCCCCCCCCCCc--hHHHHHHHhcCcee-EEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCC
Q psy7538 257 IYKEPLPGWTDNING--PTGLLIGAGKGVIR-SMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKD 333 (543)
Q Consensus 257 ~~~~p~~gw~d~~~g--~~~~~~~~~~g~~~-~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~ 333 (543)
+...+ ++.. ...++..+..|... .+.+++++.+||+||+|+|++++.++.... +++||++++
T Consensus 195 p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a~~~~~~~~~-------~~~yni~~g-- 259 (340)
T PLN02653 195 PRRGE------NFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYVEAMWLMLQQEK-------PDDYVVATE-- 259 (340)
T ss_pred CCCCc------ccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHHHHHHHHHhcCC-------CCcEEecCC--
Confidence 85321 1111 11223344455433 345889999999999999999999987532 458999999
Q ss_pred CcccHHHHHHHHhhhhcC
Q psy7538 334 YKITWQEICDIGKDIVTS 351 (543)
Q Consensus 334 ~~~t~~e~~~~i~~~~G~ 351 (543)
+++|+.|+++.+.+..|.
T Consensus 260 ~~~s~~e~~~~i~~~~g~ 277 (340)
T PLN02653 260 ESHTVEEFLEEAFGYVGL 277 (340)
T ss_pred CceeHHHHHHHHHHHcCC
Confidence 899999999999999854
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-30 Score=264.06 Aligned_cols=242 Identities=18% Similarity=0.198 Sum_probs=172.0
Q ss_pred EEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCCCC
Q psy7538 33 IFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQLKL 112 (543)
Q Consensus 33 VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~~l 112 (543)
|||||||||||++|+++|++.|+ +++++.|...... .. .....+|+.+..
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~---~~v~~~~~~~~~~---~~-----------------------~~~~~~~~~d~~- 51 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGI---TDILVVDNLKDGT---KF-----------------------VNLVDLDIADYM- 51 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCC---ceEEEecCCCcch---HH-----------------------Hhhhhhhhhhhh-
Confidence 89999999999999999999986 4556666543211 00 011223444321
Q ss_pred CCCHHH-HHHHhc-----CccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC--Cc
Q psy7538 113 GISEID-KKELID-----NVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE--KV 183 (543)
Q Consensus 113 gls~~~-~~~l~~-----~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~--~~ 183 (543)
+.++ ++.+++ ++|+|||+||.... .......++.|+.||.+++++|++. ++ +|||+||++++++. ..
T Consensus 52 --~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~-~~-~~i~~SS~~vyg~~~~~~ 127 (308)
T PRK11150 52 --DKEDFLAQIMAGDDFGDIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAATYGGRTDDF 127 (308)
T ss_pred --hHHHHHHHHhcccccCCccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEcchHHhCcCCCCC
Confidence 1112 333332 69999999986432 2233457899999999999999997 66 69999999776643 24
Q ss_pred ccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCCCC
Q psy7538 184 LEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKEPL 262 (543)
Q Consensus 184 i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~p~ 262 (543)
++|+.+..|. +.|+.||..+|++++++.. .+++++++||++|||++..+.
T Consensus 128 ~~E~~~~~p~-----------------------------~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~ 178 (308)
T PRK11150 128 IEEREYEKPL-----------------------------NVYGYSKFLFDEYVRQILPEANSQICGFRYFNVYGPREGHK 178 (308)
T ss_pred CccCCCCCCC-----------------------------CHHHHHHHHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCC
Confidence 5555433332 7899999999999998866 689999999999999976431
Q ss_pred CCCCCCCCchH-HHHHHHhcCceeEE-eecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHH
Q psy7538 263 PGWTDNINGPT-GLLIGAGKGVIRSM-YCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQE 340 (543)
Q Consensus 263 ~gw~d~~~g~~-~~~~~~~~g~~~~~-~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e 340 (543)
+. +.+.. .+...+.+|....+ .++++..+|++||||+|++++.++... . +++||++++ +++|+.|
T Consensus 179 -~~---~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~~-~------~~~yni~~~--~~~s~~e 245 (308)
T PRK11150 179 -GS---MASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWENG-V------SGIFNCGTG--RAESFQA 245 (308)
T ss_pred -Cc---cchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhcC-C------CCeEEcCCC--CceeHHH
Confidence 11 11111 23345666654333 366778999999999999999887653 2 459999998 8899999
Q ss_pred HHHHHhhhhc
Q psy7538 341 ICDIGKDIVT 350 (543)
Q Consensus 341 ~~~~i~~~~G 350 (543)
+++.+.+..|
T Consensus 246 l~~~i~~~~~ 255 (308)
T PRK11150 246 VADAVLAYHK 255 (308)
T ss_pred HHHHHHHHhC
Confidence 9999999985
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-30 Score=266.66 Aligned_cols=261 Identities=16% Similarity=0.214 Sum_probs=178.4
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
.+|+|||||||||||++++++|++.|+ +|+++.|.... .+++... + . ...++.++.+|++
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~---~V~~~~r~~~~---~~~~~~~--------~-----~-~~~~~~~~~~Dl~ 68 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQRGY---TVHATLRDPAK---SLHLLSK--------W-----K-EGDRLRLFRADLQ 68 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCChHH---HHHHHHh--------h-----c-cCCeEEEEECCCC
Confidence 578999999999999999999999987 78888886421 1111110 0 1 1246889999999
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCccCCCc-----ccHHH-----HHHHHHHHHHHHHHHHHhccCCceEEEEecCccc
Q psy7538 109 QLKLGISEIDKKELIDNVDIVYHVAATIRFD-----EPIKT-----AVILNTRGTRDMLELSKQMKNLKCFTYISTAYCH 178 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~-----~~~~~-----~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~ 178 (543)
+++ ++..+++++|+|||+||..... .+... .++.|+.|+.+++++|++.+++++||++||..++
T Consensus 69 ~~~------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vy 142 (353)
T PLN02896 69 EEG------SFDEAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTL 142 (353)
T ss_pred CHH------HHHHHHcCCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhc
Confidence 875 7888888999999999976432 12333 3455679999999999887458899999998666
Q ss_pred cCC-------CcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEe
Q psy7538 179 PSE-------KVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILR 250 (543)
Q Consensus 179 ~~~-------~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlR 250 (543)
+.. .+++|+. +.|.+. ...+ ....++|+.||.++|+++..+.+ ++++++++|
T Consensus 143 g~~~~~~~~~~~~~E~~-~~p~~~----------------~~~~---~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR 202 (353)
T PLN02896 143 TAKDSNGRWRAVVDETC-QTPIDH----------------VWNT---KASGWVYVLSKLLTEEAAFKYAKENGIDLVSVI 202 (353)
T ss_pred cccccCCCCCCccCccc-CCcHHH----------------hhcc---CCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEc
Confidence 531 2344541 111110 0000 01114899999999999999887 799999999
Q ss_pred cCeeeecCCCCCCCCCCCCCchHHHHHHHhcCcee--EEeec---CCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 251 PSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIR--SMYCK---NTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 251 ps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~--~~~~~---~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
|++|||++..+. +......+.....|... ...+. ....+|||||+|+|++++.++..... +.+
T Consensus 203 ~~~vyGp~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~~~~------~~~ 270 (353)
T PLN02896 203 TTTVAGPFLTPS------VPSSIQVLLSPITGDSKLFSILSAVNSRMGSIALVHIEDICDAHIFLMEQTKA------EGR 270 (353)
T ss_pred CCcccCCCcCCC------CCchHHHHHHHhcCCccccccccccccccCceeEEeHHHHHHHHHHHHhCCCc------Ccc
Confidence 999999976431 11111111111233211 11111 12246999999999999999876433 347
Q ss_pred EEeecCCCCcccHHHHHHHHhhhhc
Q psy7538 326 CNLTSNKDYKITWQEICDIGKDIVT 350 (543)
Q Consensus 326 yni~s~~~~~~t~~e~~~~i~~~~G 350 (543)
|++ ++ .+++++|+++.+.+..+
T Consensus 271 ~~~-~~--~~~s~~el~~~i~~~~~ 292 (353)
T PLN02896 271 YIC-CV--DSYDMSELINHLSKEYP 292 (353)
T ss_pred EEe-cC--CCCCHHHHHHHHHHhCC
Confidence 865 45 67999999999999883
|
|
| >KOG1429|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=9e-31 Score=247.27 Aligned_cols=295 Identities=20% Similarity=0.253 Sum_probs=218.7
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+++|+||||.||||+||+++|+..|+ .|.+++--..+.. +-+..+ ...+.++.+.-|+..
T Consensus 27 ~lrI~itGgaGFIgSHLvdkLm~egh---~VIa~Dn~ftg~k--~n~~~~---------------~~~~~fel~~hdv~~ 86 (350)
T KOG1429|consen 27 NLRILITGGAGFIGSHLVDKLMTEGH---EVIALDNYFTGRK--ENLEHW---------------IGHPNFELIRHDVVE 86 (350)
T ss_pred CcEEEEecCcchHHHHHHHHHHhcCC---eEEEEecccccch--hhcchh---------------ccCcceeEEEeechh
Confidence 48999999999999999999999997 7777776543311 111111 123456666666665
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCccCC---CcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCC--cc
Q psy7538 110 LKLGISEIDKKELIDNVDIVYHVAATIR---FDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEK--VL 184 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~ViH~AA~v~---~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~--~i 184 (543)
.++.+||.|||+||..+ +..+.-..+.+|+.||.+++.+|++. + +||+|.||+-++++.. +.
T Consensus 87 -----------pl~~evD~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv-~-aR~l~aSTseVYgdp~~hpq 153 (350)
T KOG1429|consen 87 -----------PLLKEVDQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRV-G-ARFLLASTSEVYGDPLVHPQ 153 (350)
T ss_pred -----------HHHHHhhhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHh-C-ceEEEeecccccCCcccCCC
Confidence 36789999999999754 44555567899999999999999998 4 8999999997776632 34
Q ss_pred ccc--ccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCCC
Q psy7538 185 EER--TYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKEP 261 (543)
Q Consensus 185 ~E~--~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~p 261 (543)
.|+ .+..|.+|+ ..|...|..+|.++..|.+ .|+.+.|.|+.+.|||...
T Consensus 154 ~e~ywg~vnpigpr--------------------------~cydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~- 206 (350)
T KOG1429|consen 154 VETYWGNVNPIGPR--------------------------SCYDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRMH- 206 (350)
T ss_pred ccccccccCcCCch--------------------------hhhhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCccc-
Confidence 444 233455554 7899999999999999998 8999999999999999763
Q ss_pred CCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHH
Q psy7538 262 LPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEI 341 (543)
Q Consensus 262 ~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~ 341 (543)
|.|. .-.+.++.++.++....++|+|.+.++|.+|+|++++++++++.... + .+|++++ +..|+.|+
T Consensus 207 ---~~dg-rvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~s~~~------~-pvNiGnp--~e~Tm~el 273 (350)
T KOG1429|consen 207 ---MDDG-RVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLMESDYR------G-PVNIGNP--GEFTMLEL 273 (350)
T ss_pred ---cCCC-hhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhcCCCc------C-CcccCCc--cceeHHHH
Confidence 4332 22344778888999999999999999999999999999999988764 2 4999999 88999999
Q ss_pred HHHHhhhhcCccCCCCccccCccccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHhh-cccccc
Q psy7538 342 CDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFICCLLFHWIPAYFLDAVILISGNKPCLVRIQERIHRGF-DVFEYY 418 (543)
Q Consensus 342 ~~~i~~~~G~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~d~~~~~~G~kP~~~~~~~~l~~~~-~~~~~f 418 (543)
++++.+..|....++....-|...-.. .| .+..+.+.+||.|++. +++++ .++.||
T Consensus 274 Aemv~~~~~~~s~i~~~~~~~Ddp~kR--------------~p--Dit~ake~LgW~Pkv~-----L~egL~~t~~~f 330 (350)
T KOG1429|consen 274 AEMVKELIGPVSEIEFVENGPDDPRKR--------------KP--DITKAKEQLGWEPKVS-----LREGLPLTVTYF 330 (350)
T ss_pred HHHHHHHcCCCcceeecCCCCCCcccc--------------Cc--cHHHHHHHhCCCCCCc-----HHHhhHHHHHHH
Confidence 999999884433322222222221111 11 2556678999999985 55555 444555
|
|
| >KOG1430|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-29 Score=254.05 Aligned_cols=333 Identities=20% Similarity=0.244 Sum_probs=242.7
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
++.+++||||+||+|.+|+++|++.+. ..+|++++.........+... .....+++++.+|+.
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~-~~~irv~D~~~~~~~~~~e~~----------------~~~~~~v~~~~~D~~ 65 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENEL-KLEIRVVDKTPTQSNLPAELT----------------GFRSGRVTVILGDLL 65 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhccc-ccEEEEeccCccccccchhhh----------------cccCCceeEEecchh
Confidence 467999999999999999999999974 448888887764211110000 012467899999999
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCccCC--Ccc-cHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCc--
Q psy7538 109 QLKLGISEIDKKELIDNVDIVYHVAATIR--FDE-PIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKV-- 183 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~vd~ViH~AA~v~--~~~-~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~-- 183 (543)
+.. .+...+.++ .|+||||... +.+ ..+.+.++||.||++++++|++. +++++||+||+++.....+
T Consensus 66 ~~~------~i~~a~~~~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~-~v~~lIYtSs~~Vvf~g~~~~ 137 (361)
T KOG1430|consen 66 DAN------SISNAFQGA-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKEL-GVKRLIYTSSAYVVFGGEPII 137 (361)
T ss_pred hhh------hhhhhccCc-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHh-CCCEEEEecCceEEeCCeecc
Confidence 886 788889999 8888888754 333 36778999999999999999999 9999999999988655443
Q ss_pred -ccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCCC
Q psy7538 184 -LEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKEP 261 (543)
Q Consensus 184 -i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~p 261 (543)
-+|+ .|.|. .+++.|+.||+.||+++.+.+. .++..+++||++|||+++.-
T Consensus 138 n~~E~-~p~p~--------------------------~~~d~Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~ 190 (361)
T KOG1430|consen 138 NGDES-LPYPL--------------------------KHIDPYGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKR 190 (361)
T ss_pred cCCCC-CCCcc--------------------------ccccccchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCcc
Confidence 2332 22222 2447999999999999999985 57999999999999998742
Q ss_pred CCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHH
Q psy7538 262 LPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEI 341 (543)
Q Consensus 262 ~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~ 341 (543)
. ...+...+..|......++++...|+++++.|+.|++.|............|++|+|+++ +|+...++
T Consensus 191 --------~-~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~~~~~~~Gq~yfI~d~--~p~~~~~~ 259 (361)
T KOG1430|consen 191 --------L-LPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALLDKSPSVNGQFYFITDD--TPVRFFDF 259 (361)
T ss_pred --------c-cHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHHhcCCccCceEEEEeCC--CcchhhHH
Confidence 1 224677778888888889999999999999999999998876552133457999999999 88888888
Q ss_pred HHHHhhhhcCccCCCCccccCccccccchhHHHHHHHHHhhhHHHHHHHHHHHhC-CCchhhHHHHHHHHhhcccccccc
Q psy7538 342 CDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFICCLLFHWIPAYFLDAVILISG-NKPCLVRIQERIHRGFDVFEYYAN 420 (543)
Q Consensus 342 ~~~i~~~~G~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~d~~~~~~G-~kP~~~~~~~~l~~~~~~~~~f~~ 420 (543)
+..+.+.+|...|. ....|. +.-+.-+++...+...++ +.|.+++.. ++-+.
T Consensus 260 ~~~l~~~lg~~~~~--~~~~p~---------------~l~~~~~~l~e~~~~~l~p~~p~lt~~~---------v~~~~- 312 (361)
T KOG1430|consen 260 LSPLVKALGYCLPS--SIKLPL---------------FLSYFLAYLLEIVYFLLRPYQPILTRFR---------VALLG- 312 (361)
T ss_pred HHHHHHhcCCCCCc--eeecch---------------HHHHHHHHHHHHHHHhccCCCCCcChhh---------eeeec-
Confidence 88888888666553 111221 111233556666667777 888876421 11111
Q ss_pred CeEEEeCccHHHHhhhCCccccccccccCCCCCHHHHHHHHHH
Q psy7538 421 NEWEFKNGNLHQTRPKRNAREIVQYCVENDNVDIVKYFEKAVY 463 (543)
Q Consensus 421 ~~w~f~~~n~~~l~~~l~~~d~~~F~~d~~~i~w~~Y~~~~~~ 463 (543)
-.-.|+.+++++.+++.+ .++|++-++.++.
T Consensus 313 ~~~~f~~~kA~~~lgY~P------------~~~~~e~~~~~~~ 343 (361)
T KOG1430|consen 313 VTRTFSIEKAKRELGYKP------------LVSLEEAIQRTIH 343 (361)
T ss_pred cccccCHHHHHHhhCCCC------------cCCHHHHHHHHHH
Confidence 233567778888777764 3567777766665
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.6e-29 Score=256.30 Aligned_cols=265 Identities=16% Similarity=0.166 Sum_probs=185.7
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|+|||||||||++|+++|++.|+ +|+++.|..... ..++..+ . .....++.++.+|++++
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~~~~~~~--~~~~~~~---------~----~~~~~~~~~~~~Dl~d~ 62 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGH---DVVILDNLCNSK--RSVLPVI---------E----RLGGKHPTFVEGDIRNE 62 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCC---eEEEEecCCCch--HhHHHHH---------H----HhcCCCceEEEccCCCH
Confidence 6899999999999999999999987 677776653321 1111111 0 00113467889999987
Q ss_pred CCCCCHHHHHHHhc--CccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC--Cc
Q psy7538 111 KLGISEIDKKELID--NVDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE--KV 183 (543)
Q Consensus 111 ~lgls~~~~~~l~~--~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~--~~ 183 (543)
+ .+..+++ ++|+|||+|+..... +.....+++|+.++.+++++|++. ++++||++||+.+++.. .+
T Consensus 63 ~------~~~~~~~~~~~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~yg~~~~~~ 135 (338)
T PRK10675 63 A------LLTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNLIFSSSATVYGDQPKIP 135 (338)
T ss_pred H------HHHHHHhcCCCCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHHhhCCCCCCc
Confidence 5 6777665 589999999876532 234568899999999999999997 78999999998666532 24
Q ss_pred ccccccC-CCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh--cCCcEEEEecCeeeecCCC
Q psy7538 184 LEERTYL-PPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME--LGMPCMILRPSIVVPIYKE 260 (543)
Q Consensus 184 i~E~~y~-~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~--~~lp~~IlRps~V~G~~~~ 260 (543)
++|+... .| .+.|+.+|..+|++++++.+ .+++++++|++.|||+...
T Consensus 136 ~~E~~~~~~p-----------------------------~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~ 186 (338)
T PRK10675 136 YVESFPTGTP-----------------------------QSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPS 186 (338)
T ss_pred cccccCCCCC-----------------------------CChhHHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcc
Confidence 5555321 11 27899999999999998765 3789999999999997531
Q ss_pred CCCCCCCCC--CchHHHHHHHhcCc--eeEEee------cCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeec
Q psy7538 261 PLPGWTDNI--NGPTGLLIGAGKGV--IRSMYC------KNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTS 330 (543)
Q Consensus 261 p~~gw~d~~--~g~~~~~~~~~~g~--~~~~~~------~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s 330 (543)
..-|--+.. ......+..+..+. ...+++ ++.+.+|+||++|+|++++.++..... . ..+++||+++
T Consensus 187 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~~~~~~~~~~~~-~--~~~~~~ni~~ 263 (338)
T PRK10675 187 GDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVAAMEKLAN-K--PGVHIYNLGA 263 (338)
T ss_pred cccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEeeEEHHHHHHHHHHHHHhhhc-c--CCCceEEecC
Confidence 110000000 01112334344332 222333 567889999999999999998875321 0 1357999999
Q ss_pred CCCCcccHHHHHHHHhhhhcCccC
Q psy7538 331 NKDYKITWQEICDIGKDIVTSKIP 354 (543)
Q Consensus 331 ~~~~~~t~~e~~~~i~~~~G~~~p 354 (543)
+ +++|++|+++.+.+..|.+.+
T Consensus 264 ~--~~~s~~e~~~~i~~~~g~~~~ 285 (338)
T PRK10675 264 G--VGSSVLDVVNAFSKACGKPVN 285 (338)
T ss_pred C--CceeHHHHHHHHHHHhCCCCC
Confidence 8 899999999999999965433
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.3e-30 Score=258.53 Aligned_cols=236 Identities=16% Similarity=0.214 Sum_probs=173.3
Q ss_pred EEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCCCCC
Q psy7538 34 FLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQLKLG 113 (543)
Q Consensus 34 lITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~~lg 113 (543)
||||||||||++|++.|++.|++ |+++.+. ..+|+++.+
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~---v~~~~~~------------------------------------~~~Dl~~~~-- 39 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFT---NLVLRTH------------------------------------KELDLTRQA-- 39 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCc---EEEeecc------------------------------------ccCCCCCHH--
Confidence 69999999999999999999873 4443221 137888765
Q ss_pred CCHHHHHHHhc--CccEEEEcCccCCC----cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccC--CCccc
Q psy7538 114 ISEIDKKELID--NVDIVYHVAATIRF----DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPS--EKVLE 185 (543)
Q Consensus 114 ls~~~~~~l~~--~vd~ViH~AA~v~~----~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~--~~~i~ 185 (543)
++..+++ ++|+||||||.... .......++.|+.|+.+++++|++. ++++|||+||+++++. ..+++
T Consensus 40 ----~l~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~i~~SS~~vyg~~~~~~~~ 114 (306)
T PLN02725 40 ----DVEAFFAKEKPTYVILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRH-GVKKLLFLGSSCIYPKFAPQPIP 114 (306)
T ss_pred ----HHHHHHhccCCCEEEEeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHc-CCCeEEEeCceeecCCCCCCCCC
Confidence 6777766 57999999997542 2334568899999999999999998 7899999999977664 23455
Q ss_pred ccccCC-CCChHHHHHHHhhcchhhhhhhhhhccCCCCc-hHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCCCC
Q psy7538 186 ERTYLP-PDDPHQVILRAESMKEEDLEVFRQDILGEFPN-SYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKEPL 262 (543)
Q Consensus 186 E~~y~~-p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn-~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~p~ 262 (543)
|+.... |..| ++ .|+.||.++|++++.+.+ .+++++++||+.|||+...-
T Consensus 115 E~~~~~~~~~p--------------------------~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~- 167 (306)
T PLN02725 115 ETALLTGPPEP--------------------------TNEWYAIAKIAGIKMCQAYRIQYGWDAISGMPTNLYGPHDNF- 167 (306)
T ss_pred HHHhccCCCCC--------------------------CcchHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCC-
Confidence 543211 1111 13 499999999999988766 68999999999999997421
Q ss_pred CCCCCCCCchHHHH----HHHhcCceeEE-eecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCccc
Q psy7538 263 PGWTDNINGPTGLL----IGAGKGVIRSM-YCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKIT 337 (543)
Q Consensus 263 ~gw~d~~~g~~~~~----~~~~~g~~~~~-~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t 337 (543)
.+-..+ .. ..++ .....|....+ ++++++.+++||++|+|++++.++..... .+.||++++ +++|
T Consensus 168 ~~~~~~-~~-~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~~~~~------~~~~ni~~~--~~~s 237 (306)
T PLN02725 168 HPENSH-VI-PALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLMRRYSG------AEHVNVGSG--DEVT 237 (306)
T ss_pred CCCCCc-cc-HHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHHHhcccc------CcceEeCCC--Cccc
Confidence 100001 11 1222 22334544443 67889999999999999999998876433 457899988 8999
Q ss_pred HHHHHHHHhhhhcCc
Q psy7538 338 WQEICDIGKDIVTSK 352 (543)
Q Consensus 338 ~~e~~~~i~~~~G~~ 352 (543)
+.|+++.+.+.+|.+
T Consensus 238 ~~e~~~~i~~~~~~~ 252 (306)
T PLN02725 238 IKELAELVKEVVGFE 252 (306)
T ss_pred HHHHHHHHHHHhCCC
Confidence 999999999998543
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.97 E-value=9e-29 Score=251.90 Aligned_cols=247 Identities=17% Similarity=0.171 Sum_probs=177.0
Q ss_pred EEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCCCC
Q psy7538 33 IFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQLKL 112 (543)
Q Consensus 33 VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~~l 112 (543)
|||||||||||++++++|++.|+. .|+++.|..... ++.++ ....+.+|+.+++
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~--~v~~~~~~~~~~----~~~~~-------------------~~~~~~~d~~~~~- 54 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGIT--DILVVDNLRDGH----KFLNL-------------------ADLVIADYIDKED- 54 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCc--eEEEEecCCCch----hhhhh-------------------hheeeeccCcchh-
Confidence 699999999999999999999862 577777654321 11100 1124567777664
Q ss_pred CCCHHHHHHHh----cCccEEEEcCccCCCc-ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCC-cccc
Q psy7538 113 GISEIDKKELI----DNVDIVYHVAATIRFD-EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEK-VLEE 186 (543)
Q Consensus 113 gls~~~~~~l~----~~vd~ViH~AA~v~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~-~i~E 186 (543)
.++.+. .++|+|||+||..... .+.....++|+.|+.+++++|++. ++ +|||+||+++++... ++.|
T Consensus 55 -----~~~~~~~~~~~~~D~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~-~~v~~SS~~vy~~~~~~~~e 127 (314)
T TIGR02197 55 -----FLDRLEKGAFGKIEAIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEK-GI-PFIYASSAATYGDGEAGFRE 127 (314)
T ss_pred -----HHHHHHhhccCCCCEEEECccccCccccchHHHHHHHHHHHHHHHHHHHHh-CC-cEEEEccHHhcCCCCCCccc
Confidence 455554 3799999999975432 345668899999999999999997 55 799999997776432 3333
Q ss_pred cccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh---cCCcEEEEecCeeeecCCCCCC
Q psy7538 187 RTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME---LGMPCMILRPSIVVPIYKEPLP 263 (543)
Q Consensus 187 ~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~---~~lp~~IlRps~V~G~~~~p~~ 263 (543)
+..+. + ..+.|+.||..+|.+++++.. .+++++++||+.|||++..+..
T Consensus 128 ~~~~~--~--------------------------p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~ 179 (314)
T TIGR02197 128 GRELE--R--------------------------PLNVYGYSKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKG 179 (314)
T ss_pred ccCcC--C--------------------------CCCHHHHHHHHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCC
Confidence 22110 0 127899999999999987532 3679999999999999764321
Q ss_pred CCCCCCCchHHHHHHHhcCceeEEe------ecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCccc
Q psy7538 264 GWTDNINGPTGLLIGAGKGVIRSMY------CKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKIT 337 (543)
Q Consensus 264 gw~d~~~g~~~~~~~~~~g~~~~~~------~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t 337 (543)
+ +.+ ....++..+..+....+. +++++.++++|+||+++++..++.. .. +++||++++ .++|
T Consensus 180 ~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~~~-~~------~~~yni~~~--~~~s 247 (314)
T TIGR02197 180 K-MAS--VAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWLLEN-GV------SGIFNLGTG--RARS 247 (314)
T ss_pred C-ccc--HHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHHHHhc-cc------CceEEcCCC--CCcc
Confidence 1 111 012344455555544443 4678889999999999999998876 33 569999998 8999
Q ss_pred HHHHHHHHhhhhcCc
Q psy7538 338 WQEICDIGKDIVTSK 352 (543)
Q Consensus 338 ~~e~~~~i~~~~G~~ 352 (543)
++|+++.+.+.+|..
T Consensus 248 ~~e~~~~i~~~~g~~ 262 (314)
T TIGR02197 248 FNDLADAVFKALGKD 262 (314)
T ss_pred HHHHHHHHHHHhCCC
Confidence 999999999999543
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-29 Score=260.48 Aligned_cols=267 Identities=14% Similarity=0.167 Sum_probs=184.7
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
-+++|+|||||||||||++|+++|++.|+ +|++++|+... .+.++++.. +. +. .....++.++.+|
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~---~V~~~~r~~~~---~~~l~~l~~------~~-~~-~~~~~~~~~v~~D 115 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRHGY---SVRIAVDTQED---KEKLREMEM------FG-EM-GRSNDGIWTVMAN 115 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHHhh------hc-cc-cccCCceEEEEcC
Confidence 36789999999999999999999999997 77788886421 112211100 00 00 0011357889999
Q ss_pred CCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcc---cHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCc--cccC-
Q psy7538 107 ITQLKLGISEIDKKELIDNVDIVYHVAATIRFDE---PIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAY--CHPS- 180 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~---~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y--~~~~- 180 (543)
+++++ ++..+++++|.|||+|+.+.... ......++|+.|+.+++++|++..++++|||+||.. +++.
T Consensus 116 l~d~~------~l~~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~ 189 (367)
T PLN02686 116 LTEPE------SLHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQN 189 (367)
T ss_pred CCCHH------HHHHHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhccccc
Confidence 99876 78888999999999999764322 124567889999999999999865799999999963 3321
Q ss_pred ---C--CcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCee
Q psy7538 181 ---E--KVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIV 254 (543)
Q Consensus 181 ---~--~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V 254 (543)
. ..++|+.+... . ......+.|+.||..+|+++..+.+ ++++++++||+.|
T Consensus 190 ~~~~~~~~i~E~~~~~~---------------~--------~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~v 246 (367)
T PLN02686 190 YPHDLPPVIDEESWSDE---------------S--------FCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALV 246 (367)
T ss_pred CCCCCCcccCCCCCCCh---------------h--------hcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCce
Confidence 1 12444421110 0 0001116899999999999988776 6999999999999
Q ss_pred eecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCC
Q psy7538 255 VPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDY 334 (543)
Q Consensus 255 ~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~ 334 (543)
||+...+ ..+..++ .+..|.. .+++++ ..+++||+|+|++++.++..... . ..+++| ++++ .
T Consensus 247 yGp~~~~--------~~~~~~~-~~~~g~~-~~~g~g--~~~~v~V~Dva~A~~~al~~~~~-~--~~~~~y-i~~g--~ 308 (367)
T PLN02686 247 TGPGFFR--------RNSTATI-AYLKGAQ-EMLADG--LLATADVERLAEAHVCVYEAMGN-K--TAFGRY-ICFD--H 308 (367)
T ss_pred ECCCCCC--------CCChhHH-HHhcCCC-ccCCCC--CcCeEEHHHHHHHHHHHHhccCC-C--CCCCcE-EEeC--C
Confidence 9996432 1122222 3444542 344444 45799999999999999875311 0 135688 7777 7
Q ss_pred cccHHHHHHHHhhhhcCccC
Q psy7538 335 KITWQEICDIGKDIVTSKIP 354 (543)
Q Consensus 335 ~~t~~e~~~~i~~~~G~~~p 354 (543)
++++.|+++.+.+.+|.+.+
T Consensus 309 ~~s~~e~~~~i~~~~g~~~~ 328 (367)
T PLN02686 309 VVSREDEAEELARQIGLPIN 328 (367)
T ss_pred CccHHHHHHHHHHHcCCCCC
Confidence 89999999999999965433
|
|
| >KOG1371|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-29 Score=244.28 Aligned_cols=318 Identities=19% Similarity=0.177 Sum_probs=233.9
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+++||||||+||||+|.+-+|++.|++|--|.-+.|+- ...-.|++.++ ...+++.++++|+.|
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~--~~sl~r~~~l~--------------~~~~~v~f~~~Dl~D 65 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSY--LESLKRVRQLL--------------GEGKSVFFVEGDLND 65 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccc--hhHHHHHHHhc--------------CCCCceEEEEeccCC
Confidence 57999999999999999999999999776666666654 23345665542 224789999999998
Q ss_pred CCCCCCHHHHHHHhc--CccEEEEcCccCCCccc---HHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC--C
Q psy7538 110 LKLGISEIDKKELID--NVDIVYHVAATIRFDEP---IKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE--K 182 (543)
Q Consensus 110 ~~lgls~~~~~~l~~--~vd~ViH~AA~v~~~~~---~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~--~ 182 (543)
.. .++++++ +.|.|+|.||.-...++ +...+..|+.||.+||+.+++. +++.+|+.||+.+++.. -
T Consensus 66 ~~------~L~kvF~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~-~~~~~V~sssatvYG~p~~i 138 (343)
T KOG1371|consen 66 AE------ALEKLFSEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAH-NVKALVFSSSATVYGLPTKV 138 (343)
T ss_pred HH------HHHHHHhhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHc-CCceEEEecceeeecCccee
Confidence 76 7899887 47999999998665443 3457899999999999999999 69999999999666654 4
Q ss_pred cccccccCC-CCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCC
Q psy7538 183 VLEERTYLP-PDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKE 260 (543)
Q Consensus 183 ~i~E~~y~~-p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~ 260 (543)
++.|+.... |. |+|+.||...|.++..+.. .++.++++|.++++|....
T Consensus 139 p~te~~~t~~p~-----------------------------~pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~ 189 (343)
T KOG1371|consen 139 PITEEDPTDQPT-----------------------------NPYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPS 189 (343)
T ss_pred eccCcCCCCCCC-----------------------------CcchhhhHHHHHHHHhhhccccceEEEEEeccccCcccc
Confidence 677764433 33 8999999999999999988 6799999999999994332
Q ss_pred CC-----CCCCCCCCchHHHHHHHhcCce--eEE------eecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEE
Q psy7538 261 PL-----PGWTDNINGPTGLLIGAGKGVI--RSM------YCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCN 327 (543)
Q Consensus 261 p~-----~gw~d~~~g~~~~~~~~~~g~~--~~~------~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyn 327 (543)
.. +|...|+. | .+..+..|.. ..+ ..+++.++|.+|+-|.|.+.+.|+.+... . ....+||
T Consensus 190 Gr~ge~p~~~~nnl~-p--~v~~vaigr~~~l~v~g~d~~t~dgt~vrdyi~v~Dla~~h~~al~k~~~-~--~~~~i~N 263 (343)
T KOG1371|consen 190 GRIGEAPLGIPNNLL-P--YVFQVAIGRRPNLQVVGRDYTTIDGTIVRDYIHVLDLADGHVAALGKLRG-A--AEFGVYN 263 (343)
T ss_pred CccCCCCccCccccc-c--cccchhhcccccceeecCcccccCCCeeecceeeEehHHHHHHHhhcccc-c--hheeeEe
Confidence 21 22222211 1 1222222221 122 23568999999999999999999987653 1 1345999
Q ss_pred eecCCCCcccHHHHHHHHhhhhcCccCCCCccccCccccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHH
Q psy7538 328 LTSNKDYKITWQEICDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFICCLLFHWIPAYFLDAVILISGNKPCLVRIQER 407 (543)
Q Consensus 328 i~s~~~~~~t~~e~~~~i~~~~G~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~d~~~~~~G~kP~~~~~~~~ 407 (543)
++++ .+.+..+++..+.+..|.+.|......++...... -.......+.+||+|...
T Consensus 264 lgtg--~g~~V~~lv~a~~k~~g~~~k~~~v~~R~gdv~~~----------------ya~~~~a~~elgwk~~~~----- 320 (343)
T KOG1371|consen 264 LGTG--KGSSVLELVTAFEKALGVKIKKKVVPRRNGDVAFV----------------YANPSKAQRELGWKAKYG----- 320 (343)
T ss_pred ecCC--CCccHHHHHHHHHHHhcCCCCccccCCCCCCceee----------------eeChHHHHHHhCCccccC-----
Confidence 9999 89999999999999998888866554444332100 011345568999999987
Q ss_pred HHHhh-ccccccccCeEEEeCc
Q psy7538 408 IHRGF-DVFEYYANNEWEFKNG 428 (543)
Q Consensus 408 l~~~~-~~~~~f~~~~w~f~~~ 428 (543)
+++++ +.++|..++.+.|+++
T Consensus 321 iee~c~dlw~W~~~np~gy~~~ 342 (343)
T KOG1371|consen 321 LQEMLKDLWRWQKQNPSGYDTK 342 (343)
T ss_pred HHHHHHHHHHHHhcCCCcCCCC
Confidence 44444 6778888888877654
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.97 E-value=6e-29 Score=242.24 Aligned_cols=227 Identities=23% Similarity=0.358 Sum_probs=182.2
Q ss_pred EEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCCCC
Q psy7538 33 IFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQLKL 112 (543)
Q Consensus 33 VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~~l 112 (543)
|||||||||||++|+++|+++|+ .|+.+.|++....... ...++.++.+|+.+.+
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~---~v~~~~~~~~~~~~~~---------------------~~~~~~~~~~dl~~~~- 55 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGH---EVIVLSRSSNSESFEE---------------------KKLNVEFVIGDLTDKE- 55 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTT---EEEEEESCSTGGHHHH---------------------HHTTEEEEESETTSHH-
T ss_pred EEEEccCCHHHHHHHHHHHHcCC---cccccccccccccccc---------------------ccceEEEEEeeccccc-
Confidence 79999999999999999999997 6778888875421110 0127899999999765
Q ss_pred CCCHHHHHHHhcCc--cEEEEcCccCCC---cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC--Cccc
Q psy7538 113 GISEIDKKELIDNV--DIVYHVAATIRF---DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE--KVLE 185 (543)
Q Consensus 113 gls~~~~~~l~~~v--d~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~--~~i~ 185 (543)
.+++++++. |+|||+||.... .......++.|+.++.+++++|++. ++++||++||+.+++.. .+++
T Consensus 56 -----~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~i~~sS~~~y~~~~~~~~~ 129 (236)
T PF01370_consen 56 -----QLEKLLEKANIDVVIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREA-GVKRFIFLSSASVYGDPDGEPID 129 (236)
T ss_dssp -----HHHHHHHHHTESEEEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TTSEEEEEEEGGGGTSSSSSSBE
T ss_pred -----cccccccccCceEEEEeeccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccc
Confidence 788888765 999999998642 1345678899999999999999998 77999999999666654 3566
Q ss_pred ccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCCCCCC
Q psy7538 186 ERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKEPLPG 264 (543)
Q Consensus 186 E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~p~~g 264 (543)
|+....|. +.|+.+|..+|++++.+.+ ++++++++||+.|||+. .+..
T Consensus 130 e~~~~~~~-----------------------------~~Y~~~K~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~-~~~~- 178 (236)
T PF01370_consen 130 EDSPINPL-----------------------------SPYGASKRAAEELLRDYAKKYGLRVTILRPPNVYGPG-NPNN- 178 (236)
T ss_dssp TTSGCCHS-----------------------------SHHHHHHHHHHHHHHHHHHHHTSEEEEEEESEEESTT-SSSS-
T ss_pred cccccccc-----------------------------ccccccccccccccccccccccccccccccccccccc-cccc-
Confidence 66444333 7899999999999999887 69999999999999998 1111
Q ss_pred CCCCCCc-hHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEee
Q psy7538 265 WTDNING-PTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLT 329 (543)
Q Consensus 265 w~d~~~g-~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~ 329 (543)
+..+ ...++..+.+|....+++++++.++++|++|+|++++.++.+... .+++||++
T Consensus 179 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-----~~~~yNig 236 (236)
T PF01370_consen 179 ---NSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPKA-----AGGIYNIG 236 (236)
T ss_dssp ---STSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSCT-----TTEEEEES
T ss_pred ---ccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCCC-----CCCEEEeC
Confidence 1122 234777888888777899999999999999999999999998873 37899985
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-28 Score=249.57 Aligned_cols=247 Identities=19% Similarity=0.260 Sum_probs=185.3
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|+|||||||||+++++.|++.|+ +|+++.|+..... .....+++++.+|++++
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~---~V~~~~r~~~~~~----------------------~~~~~~~~~~~~D~~~~ 55 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGE---EVRVLVRPTSDRR----------------------NLEGLDVEIVEGDLRDP 55 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCC---EEEEEEecCcccc----------------------ccccCCceEEEeeCCCH
Confidence 5899999999999999999999986 7899999754311 01113688999999987
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccC---CCcccc
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPS---EKVLEE 186 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~---~~~i~E 186 (543)
+ ++..+++++|+|||+|+.... .+.....+++|+.|+.+++++|++. ++++||++||.++++. ..+++|
T Consensus 56 ~------~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~e 128 (328)
T TIGR03466 56 A------SLRKAVAGCRALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEA-GVERVVYTSSVATLGVRGDGTPADE 128 (328)
T ss_pred H------HHHHHHhCCCEEEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEechhhcCcCCCCCCcCc
Confidence 5 788889999999999987543 3456778999999999999999987 7899999999977653 224555
Q ss_pred cccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCCCCCCC
Q psy7538 187 RTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKEPLPGW 265 (543)
Q Consensus 187 ~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~p~~gw 265 (543)
+....|.+ ..+.|+.+|..+|+++.++.. .+++++++||+.+||+....
T Consensus 129 ~~~~~~~~--------------------------~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~---- 178 (328)
T TIGR03466 129 TTPSSLDD--------------------------MIGHYKRSKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDIK---- 178 (328)
T ss_pred cCCCCccc--------------------------ccChHHHHHHHHHHHHHHHHHhcCCCEEEEeCCccCCCCCCC----
Confidence 43222211 116899999999999999876 68999999999999986421
Q ss_pred CCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHHHHH
Q psy7538 266 TDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEICDIG 345 (543)
Q Consensus 266 ~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~~~i 345 (543)
......++.....+..... .+...+++|++|+|++++.++.... .+..||++ + ++++++|+++.+
T Consensus 179 ---~~~~~~~~~~~~~~~~~~~---~~~~~~~i~v~D~a~a~~~~~~~~~------~~~~~~~~-~--~~~s~~e~~~~i 243 (328)
T TIGR03466 179 ---PTPTGRIIVDFLNGKMPAY---VDTGLNLVHVDDVAEGHLLALERGR------IGERYILG-G--ENLTLKQILDKL 243 (328)
T ss_pred ---CCcHHHHHHHHHcCCCcee---eCCCcceEEHHHHHHHHHHHHhCCC------CCceEEec-C--CCcCHHHHHHHH
Confidence 0111233444444332222 2345789999999999998887643 26788885 5 679999999999
Q ss_pred hhhhcCccC
Q psy7538 346 KDIVTSKIP 354 (543)
Q Consensus 346 ~~~~G~~~p 354 (543)
.+.+|.+.+
T Consensus 244 ~~~~g~~~~ 252 (328)
T TIGR03466 244 AEITGRPAP 252 (328)
T ss_pred HHHhCCCCC
Confidence 999965433
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=5e-28 Score=247.06 Aligned_cols=224 Identities=14% Similarity=0.126 Sum_probs=171.7
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|+|||||||+|++|+++|++.|+ +|++++|+.... +.+ ...+++++.||++++
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~---~V~~l~R~~~~~---~~l-------------------~~~~v~~v~~Dl~d~ 55 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGY---QVRCLVRNLRKA---SFL-------------------KEWGAELVYGDLSLP 55 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC---eEEEEEcChHHh---hhH-------------------hhcCCEEEECCCCCH
Confidence 6899999999999999999999987 789999975321 111 113688999999987
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCcccccccC
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYL 190 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i~E~~y~ 190 (543)
+ ++..+++++|+|||+++... .......++|+.|+.+++++|++. ++++|||+||..+.. ++
T Consensus 56 ~------~l~~al~g~d~Vi~~~~~~~--~~~~~~~~~~~~~~~~l~~aa~~~-gvkr~I~~Ss~~~~~---------~~ 117 (317)
T CHL00194 56 E------TLPPSFKGVTAIIDASTSRP--SDLYNAKQIDWDGKLALIEAAKAA-KIKRFIFFSILNAEQ---------YP 117 (317)
T ss_pred H------HHHHHHCCCCEEEECCCCCC--CCccchhhhhHHHHHHHHHHHHHc-CCCEEEEeccccccc---------cC
Confidence 6 78899999999999986432 223457789999999999999998 899999999963311 00
Q ss_pred CCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCCCCCCCCC
Q psy7538 191 PPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPGWTDNIN 270 (543)
Q Consensus 191 ~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~gw~d~~~ 270 (543)
+.+|..+|..+|+.+.+. +++++|+||+.+|+..-.
T Consensus 118 -------------------------------~~~~~~~K~~~e~~l~~~---~l~~tilRp~~~~~~~~~---------- 153 (317)
T CHL00194 118 -------------------------------YIPLMKLKSDIEQKLKKS---GIPYTIFRLAGFFQGLIS---------- 153 (317)
T ss_pred -------------------------------CChHHHHHHHHHHHHHHc---CCCeEEEeecHHhhhhhh----------
Confidence 056889999999998764 899999999977653110
Q ss_pred chHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHHHHHhhhhc
Q psy7538 271 GPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEICDIGKDIVT 350 (543)
Q Consensus 271 g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~~~i~~~~G 350 (543)
........+... ...++++.+++||++|+|+++..++..+.. .+++||++++ +++|++|+++.+.+..|
T Consensus 154 ---~~~~~~~~~~~~-~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~-----~~~~~ni~g~--~~~s~~el~~~~~~~~g 222 (317)
T CHL00194 154 ---QYAIPILEKQPI-WITNESTPISYIDTQDAAKFCLKSLSLPET-----KNKTFPLVGP--KSWNSSEIISLCEQLSG 222 (317)
T ss_pred ---hhhhhhccCCce-EecCCCCccCccCHHHHHHHHHHHhcCccc-----cCcEEEecCC--CccCHHHHHHHHHHHhC
Confidence 011112223322 234567788999999999999988876543 4789999998 89999999999999996
Q ss_pred Cc
Q psy7538 351 SK 352 (543)
Q Consensus 351 ~~ 352 (543)
.+
T Consensus 223 ~~ 224 (317)
T CHL00194 223 QK 224 (317)
T ss_pred CC
Confidence 54
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-27 Score=240.04 Aligned_cols=224 Identities=19% Similarity=0.204 Sum_probs=173.3
Q ss_pred EEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCCC
Q psy7538 32 SIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQLK 111 (543)
Q Consensus 32 ~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~~ 111 (543)
+|+|||||||+|++++++|++.|+ +|+++.|. .+|+.+++
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~---~v~~~~r~-------------------------------------~~d~~~~~ 40 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGR---VVVALTSS-------------------------------------QLDLTDPE 40 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCC---EEEEeCCc-------------------------------------ccCCCCHH
Confidence 589999999999999999999987 67877773 25776654
Q ss_pred CCCCHHHHHHHhcCc--cEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC--Ccc
Q psy7538 112 LGISEIDKKELIDNV--DIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE--KVL 184 (543)
Q Consensus 112 lgls~~~~~~l~~~v--d~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~--~~i 184 (543)
++..+++++ |+|||+|+..... ......+++|+.|+.+++++|++. +. +||++||.++++.. .++
T Consensus 41 ------~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~v~~Ss~~vy~~~~~~~~ 112 (287)
T TIGR01214 41 ------ALERLLRAIRPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARH-GA-RLVHISTDYVFDGEGKRPY 112 (287)
T ss_pred ------HHHHHHHhCCCCEEEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEeeeeeecCCCCCCC
Confidence 777777765 9999999976543 234567899999999999999987 44 89999999777543 245
Q ss_pred cccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCCC
Q psy7538 185 EERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPG 264 (543)
Q Consensus 185 ~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~g 264 (543)
+|+..+.|. +.|+.+|..+|++++.+ +++++|+||++|||+....
T Consensus 113 ~E~~~~~~~-----------------------------~~Y~~~K~~~E~~~~~~---~~~~~ilR~~~v~G~~~~~--- 157 (287)
T TIGR01214 113 REDDATNPL-----------------------------NVYGQSKLAGEQAIRAA---GPNALIVRTSWLYGGGGGR--- 157 (287)
T ss_pred CCCCCCCCc-----------------------------chhhHHHHHHHHHHHHh---CCCeEEEEeeecccCCCCC---
Confidence 565332222 78999999999999887 6899999999999996420
Q ss_pred CCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHHHH
Q psy7538 265 WTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEICDI 344 (543)
Q Consensus 265 w~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~~~ 344 (543)
.-...++..+..+....+.+ +...++++++|+|++++.++..... .+++||++++ +++|+.|+++.
T Consensus 158 -----~~~~~~~~~~~~~~~~~~~~--~~~~~~v~v~Dva~a~~~~~~~~~~-----~~~~~ni~~~--~~~s~~e~~~~ 223 (287)
T TIGR01214 158 -----NFVRTMLRLAGRGEELRVVD--DQIGSPTYAKDLARVIAALLQRLAR-----ARGVYHLANS--GQCSWYEFAQA 223 (287)
T ss_pred -----CHHHHHHHHhhcCCCceEec--CCCcCCcCHHHHHHHHHHHHhhccC-----CCCeEEEECC--CCcCHHHHHHH
Confidence 11223455555554333333 4678999999999999999876532 3679999998 89999999999
Q ss_pred HhhhhcCc
Q psy7538 345 GKDIVTSK 352 (543)
Q Consensus 345 i~~~~G~~ 352 (543)
+.+.+|.+
T Consensus 224 i~~~~~~~ 231 (287)
T TIGR01214 224 IFEEAGAD 231 (287)
T ss_pred HHHHhCcc
Confidence 99999654
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-27 Score=244.91 Aligned_cols=235 Identities=18% Similarity=0.184 Sum_probs=177.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+|||||||||||++|+++|++.|. ..+|+++.|.... ...+.+. . ...++.++.+|+
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~-~~~V~~~~r~~~~---~~~~~~~--------------~-~~~~~~~v~~Dl 62 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYN-PKKIIIYSRDELK---QWEMQQK--------------F-PAPCLRFFIGDV 62 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCC-CcEEEEEcCChhH---HHHHHHH--------------h-CCCcEEEEEccC
Confidence 5789999999999999999999999862 2378888886421 1112111 0 114688999999
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCccCCC---cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCcc
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAATIRF---DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVL 184 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i 184 (543)
++++ ++..+++++|+|||+||.... ..+....+++|+.|+.+++++|++. ++++||++||....
T Consensus 63 ~d~~------~l~~~~~~iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~-~~~~iV~~SS~~~~------ 129 (324)
T TIGR03589 63 RDKE------RLTRALRGVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDN-GVKRVVALSTDKAA------ 129 (324)
T ss_pred CCHH------HHHHHHhcCCEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEeCCCCC------
Confidence 9875 788888999999999997542 2334578999999999999999997 78899999996321
Q ss_pred cccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHh---h-cCCcEEEEecCeeeecCCC
Q psy7538 185 EERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECM---E-LGMPCMILRPSIVVPIYKE 260 (543)
Q Consensus 185 ~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~---~-~~lp~~IlRps~V~G~~~~ 260 (543)
.|. ++|+.||+.+|+++..+. . .|++++++||++|||+..
T Consensus 130 ------~p~-----------------------------~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~- 173 (324)
T TIGR03589 130 ------NPI-----------------------------NLYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRG- 173 (324)
T ss_pred ------CCC-----------------------------CHHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCC-
Confidence 011 789999999999987643 2 589999999999999742
Q ss_pred CCCCCCCCCCchHHHHHHHhcCc-eeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHH
Q psy7538 261 PLPGWTDNINGPTGLLIGAGKGV-IRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQ 339 (543)
Q Consensus 261 p~~gw~d~~~g~~~~~~~~~~g~-~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~ 339 (543)
+ -...+...+..|. ... .+++++.++|+||+|+|++++.++..... +++|+ +++ ...++.
T Consensus 174 -------~--~i~~~~~~~~~~~~~~~-i~~~~~~r~~i~v~D~a~a~~~al~~~~~------~~~~~-~~~--~~~sv~ 234 (324)
T TIGR03589 174 -------S--VVPFFKSLKEEGVTELP-ITDPRMTRFWITLEQGVNFVLKSLERMLG------GEIFV-PKI--PSMKIT 234 (324)
T ss_pred -------C--cHHHHHHHHHhCCCCee-eCCCCceEeeEEHHHHHHHHHHHHhhCCC------CCEEc-cCC--CcEEHH
Confidence 1 1122334444554 233 34778889999999999999999876432 56884 555 568999
Q ss_pred HHHHHHhhhh
Q psy7538 340 EICDIGKDIV 349 (543)
Q Consensus 340 e~~~~i~~~~ 349 (543)
|+++.+.+..
T Consensus 235 el~~~i~~~~ 244 (324)
T TIGR03589 235 DLAEAMAPEC 244 (324)
T ss_pred HHHHHHHhhC
Confidence 9999998865
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3e-27 Score=241.61 Aligned_cols=303 Identities=18% Similarity=0.206 Sum_probs=204.4
Q ss_pred EEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCCC
Q psy7538 32 SIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQLK 111 (543)
Q Consensus 32 ~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~~ 111 (543)
+|+|||||||||++++++|++.|+ +|+++.|..+.. .+++... . ...+++.+.+|+++++
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~---~V~~~~~~~~~~--~~~~~~~--------------~-~~~~~~~~~~D~~~~~ 60 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGH---EVVVLDNLSNGS--PEALKRG--------------E-RITRVTFVEGDLRDRE 60 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCC---eEEEEeCCCccc--hhhhhhh--------------c-cccceEEEECCCCCHH
Confidence 589999999999999999999987 677666543321 1111110 0 0125778899999876
Q ss_pred CCCCHHHHHHHhc--CccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC--Ccc
Q psy7538 112 LGISEIDKKELID--NVDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE--KVL 184 (543)
Q Consensus 112 lgls~~~~~~l~~--~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~--~~i 184 (543)
++..+++ ++|+|||+||..... ......++.|+.++.+++++|.+. +++++|++||.++++.. .++
T Consensus 61 ------~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~ss~~~~g~~~~~~~ 133 (328)
T TIGR01179 61 ------LLDRLFEEHKIDAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQT-GVKKFIFSSSAAVYGEPSSIPI 133 (328)
T ss_pred ------HHHHHHHhCCCcEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhc-CCCEEEEecchhhcCCCCCCCc
Confidence 6777765 699999999976432 234457889999999999999987 78899999998665432 245
Q ss_pred cccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh--cCCcEEEEecCeeeecCCCCC
Q psy7538 185 EERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME--LGMPCMILRPSIVVPIYKEPL 262 (543)
Q Consensus 185 ~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~--~~lp~~IlRps~V~G~~~~p~ 262 (543)
+|+....|. +.|+.+|..+|.++..+.. .+++++++||+.|||+...+.
T Consensus 134 ~e~~~~~~~-----------------------------~~y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~ 184 (328)
T TIGR01179 134 SEDSPLGPI-----------------------------NPYGRSKLMSERILRDLSKADPGLSYVILRYFNVAGADPEGT 184 (328)
T ss_pred cccCCCCCC-----------------------------CchHHHHHHHHHHHHHHHHhccCCCEEEEecCcccCCCCCCc
Confidence 554322221 7899999999999988754 489999999999999976554
Q ss_pred CCCCCC-CCchHHHHHHHhc--CceeEEe------ecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCC
Q psy7538 263 PGWTDN-INGPTGLLIGAGK--GVIRSMY------CKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKD 333 (543)
Q Consensus 263 ~gw~d~-~~g~~~~~~~~~~--g~~~~~~------~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~ 333 (543)
.++... .......+..... +....+. .++++.+++||++|+++++..++..... . ..+++||++++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~~~~~~~~~~~~-~--~~~~~~n~~~~-- 259 (328)
T TIGR01179 185 IGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLADAHLAALEYLLN-G--GESHVYNLGYG-- 259 (328)
T ss_pred cccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHHHHHHHHHhhhhc-C--CCcceEEcCCC--
Confidence 443211 1111111222222 1212222 2567789999999999999988875321 1 13679999998
Q ss_pred CcccHHHHHHHHhhhhcCccCCCCccccCccccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHh
Q psy7538 334 YKITWQEICDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFICCLLFHWIPAYFLDAVILISGNKPCLVRIQERIHRG 411 (543)
Q Consensus 334 ~~~t~~e~~~~i~~~~G~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~d~~~~~~G~kP~~~~~~~~l~~~ 411 (543)
+++|++|+++.+.+.+|.+.+.......+.. .. ......+.+.+.+||+|+...+.+.+.+.
T Consensus 260 ~~~s~~ei~~~~~~~~g~~~~~~~~~~~~~~------~~----------~~~~~~~~~~~~lg~~p~~~~l~~~~~~~ 321 (328)
T TIGR01179 260 QGFSVLEVIEAFKKVSGVDFPVELAPRRPGD------PA----------SLVADASKIRRELGWQPKYTDLEIIIKTA 321 (328)
T ss_pred CcccHHHHHHHHHHHhCCCcceEeCCCCCcc------cc----------chhcchHHHHHHhCCCCCcchHHHHHHHH
Confidence 8899999999999999655433221111100 00 00112345567899999876666666653
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-27 Score=239.67 Aligned_cols=255 Identities=13% Similarity=0.141 Sum_probs=180.4
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
.+++|+|||||||||++++++|++.|+ +|++++|+.......+.+..+ .....++.++.+|++
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~---~V~~~~R~~~~~~~~~~~~~l--------------~~~~~~~~~~~~Dl~ 67 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSRGY---TVHAAVQKNGETEIEKEIRGL--------------SCEEERLKVFDVDPL 67 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCC---EEEEEEcCchhhhHHHHHHhc--------------ccCCCceEEEEecCC
Confidence 367999999999999999999999997 788888864322111111111 111246889999999
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccc--c-C----
Q psy7538 109 QLKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCH--P-S---- 180 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~--~-~---- 180 (543)
+++ ++..++.++|.|+|+++.... ....+..+++|+.||.+++++|.+..+++++|++||..+. . .
T Consensus 68 d~~------~~~~~l~~~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~ 141 (297)
T PLN02583 68 DYH------SILDALKGCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNIST 141 (297)
T ss_pred CHH------HHHHHHcCCCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCC
Confidence 876 788889999999998865532 2335678999999999999999886468999999998442 2 1
Q ss_pred CCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCC
Q psy7538 181 EKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYK 259 (543)
Q Consensus 181 ~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~ 259 (543)
..+++|+.+.++. ........|+.||.++|++++.+.+ .+++++++||+.|||+..
T Consensus 142 ~~~~~E~~~~~~~-----------------------~~~~~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~ 198 (297)
T PLN02583 142 QKDVDERSWSDQN-----------------------FCRKFKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSL 198 (297)
T ss_pred CCCCCcccCCCHH-----------------------HHhhcccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCC
Confidence 1134444221110 0001114799999999999988765 689999999999999865
Q ss_pred CCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHH
Q psy7538 260 EPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQ 339 (543)
Q Consensus 260 ~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~ 339 (543)
.+.. . ...+... .. +....++|||+|+|++++.|++.+.. ++.|+|+++ +...+.
T Consensus 199 ~~~~----------~----~~~~~~~-~~--~~~~~~~v~V~Dva~a~~~al~~~~~------~~r~~~~~~--~~~~~~ 253 (297)
T PLN02583 199 TQHN----------P----YLKGAAQ-MY--ENGVLVTVDVNFLVDAHIRAFEDVSS------YGRYLCFNH--IVNTEE 253 (297)
T ss_pred CCch----------h----hhcCCcc-cC--cccCcceEEHHHHHHHHHHHhcCccc------CCcEEEecC--CCccHH
Confidence 3210 0 1122211 11 23456899999999999999986654 447999886 555678
Q ss_pred HHHHHHhhhhcCccCC
Q psy7538 340 EICDIGKDIVTSKIPF 355 (543)
Q Consensus 340 e~~~~i~~~~G~~~p~ 355 (543)
++.+++.+.+ ...|.
T Consensus 254 ~~~~~~~~~~-p~~~~ 268 (297)
T PLN02583 254 DAVKLAQMLS-PLIPS 268 (297)
T ss_pred HHHHHHHHhC-CCCCC
Confidence 8999999988 55443
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.1e-27 Score=242.44 Aligned_cols=254 Identities=20% Similarity=0.213 Sum_probs=209.7
Q ss_pred chhhccCcchhhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcC
Q psy7538 14 PKELQALPDRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRG 93 (543)
Q Consensus 14 ~~~~~~~~~~i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~ 93 (543)
++++....+.+..+++||+|+||||+|-+|+.+++++++.+| ++|+++.|+..+.. -+ -..|+...
T Consensus 234 R~pV~~d~~~i~~~~~gK~vLVTGagGSiGsel~~qil~~~p--~~i~l~~~~E~~~~---~i--------~~el~~~~- 299 (588)
T COG1086 234 RPPVALDTELIGAMLTGKTVLVTGGGGSIGSELCRQILKFNP--KEIILFSRDEYKLY---LI--------DMELREKF- 299 (588)
T ss_pred CCCCCCCHHHHHhHcCCCEEEEeCCCCcHHHHHHHHHHhcCC--CEEEEecCchHHHH---HH--------HHHHHhhC-
Confidence 344555667899999999999999999999999999999976 79999999864321 11 11222222
Q ss_pred cCCCCceEEEEccCCCCCCCCCHHHHHHHhcC--ccEEEEcCccCCC---cccHHHHHHHHHHHHHHHHHHHHhccCCce
Q psy7538 94 KSILQKIQVISGDITQLKLGISEIDKKELIDN--VDIVYHVAATIRF---DEPIKTAVILNTRGTRDMLELSKQMKNLKC 168 (543)
Q Consensus 94 ~~~~~~v~~i~gDl~~~~lgls~~~~~~l~~~--vd~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~ 168 (543)
+ ..++.++-||+.|.+ .+..++++ +|+|||+||.-+. +.++.+++++||.||+|++++|.++ ++++
T Consensus 300 ~--~~~~~~~igdVrD~~------~~~~~~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~-~V~~ 370 (588)
T COG1086 300 P--ELKLRFYIGDVRDRD------RVERAMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKN-GVKK 370 (588)
T ss_pred C--CcceEEEecccccHH------HHHHHHhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHh-CCCE
Confidence 2 468899999999986 78999998 9999999997653 5778899999999999999999999 9999
Q ss_pred EEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh--c--CC
Q psy7538 169 FTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME--L--GM 244 (543)
Q Consensus 169 ~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~--~--~l 244 (543)
||.+||.-+.. |. |.||.||.+||.++..++. . +.
T Consensus 371 ~V~iSTDKAV~------------Pt-----------------------------NvmGaTKr~aE~~~~a~~~~~~~~~T 409 (588)
T COG1086 371 FVLISTDKAVN------------PT-----------------------------NVMGATKRLAEKLFQAANRNVSGTGT 409 (588)
T ss_pred EEEEecCcccC------------Cc-----------------------------hHhhHHHHHHHHHHHHHhhccCCCCc
Confidence 99999983321 11 9999999999999998876 2 48
Q ss_pred cEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCc
Q psy7538 245 PCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKS 324 (543)
Q Consensus 245 p~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~ 324 (543)
.++++|.|+|.|+...-+| -+..++.+|.+.+ ..+++-.+=|+.+++.|+.++.|+..... |+
T Consensus 410 ~f~~VRFGNVlGSrGSViP----------lFk~QI~~GgplT-vTdp~mtRyfMTI~EAv~LVlqA~a~~~g------Ge 472 (588)
T COG1086 410 RFCVVRFGNVLGSRGSVIP----------LFKKQIAEGGPLT-VTDPDMTRFFMTIPEAVQLVLQAGAIAKG------GE 472 (588)
T ss_pred EEEEEEecceecCCCCCHH----------HHHHHHHcCCCcc-ccCCCceeEEEEHHHHHHHHHHHHhhcCC------Cc
Confidence 8999999999998643222 3667788887665 56899999999999999999999887654 89
Q ss_pred EEEeecCCCCcccHHHHHHHHhhhhc
Q psy7538 325 VCNLTSNKDYKITWQEICDIGKDIVT 350 (543)
Q Consensus 325 vyni~s~~~~~~t~~e~~~~i~~~~G 350 (543)
+|-+--| +|+++.|+++.+.+..|
T Consensus 473 ifvldMG--epvkI~dLAk~mi~l~g 496 (588)
T COG1086 473 IFVLDMG--EPVKIIDLAKAMIELAG 496 (588)
T ss_pred EEEEcCC--CCeEHHHHHHHHHHHhC
Confidence 9999998 99999999999999996
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-26 Score=240.95 Aligned_cols=237 Identities=16% Similarity=0.185 Sum_probs=180.4
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
.++++|+|||||||||+++++.|++.|+ +|++++|+..+........+. .....+++++.+|+
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~---~V~~l~R~~~~~~~~~~~~~~--------------~~~~~~v~~v~~Dl 120 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGY---NVVAVAREKSGIRGKNGKEDT--------------KKELPGAEVVFGDV 120 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEEechhhccccchhhHH--------------hhhcCCceEEEeeC
Confidence 4678999999999999999999999987 789999986432111000000 11124688999999
Q ss_pred CCCCCCCCHHHHHHHhc----CccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCc
Q psy7538 108 TQLKLGISEIDKKELID----NVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKV 183 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~----~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~ 183 (543)
++++ ++..+++ ++|+||||+|.... .....+++|+.++.+++++|++. ++++||++||.++...
T Consensus 121 ~d~~------~l~~~~~~~~~~~D~Vi~~aa~~~~--~~~~~~~vn~~~~~~ll~aa~~~-gv~r~V~iSS~~v~~p--- 188 (390)
T PLN02657 121 TDAD------SLRKVLFSEGDPVDVVVSCLASRTG--GVKDSWKIDYQATKNSLDAGREV-GAKHFVLLSAICVQKP--- 188 (390)
T ss_pred CCHH------HHHHHHHHhCCCCcEEEECCccCCC--CCccchhhHHHHHHHHHHHHHHc-CCCEEEEEeeccccCc---
Confidence 9986 7888777 59999999985321 12345788999999999999998 8999999999865321
Q ss_pred ccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCC
Q psy7538 184 LEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLP 263 (543)
Q Consensus 184 i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~ 263 (543)
. +.|..+|..+|+.+.... .+++++|+||+.+||..
T Consensus 189 ---------~-----------------------------~~~~~sK~~~E~~l~~~~-~gl~~tIlRp~~~~~~~----- 224 (390)
T PLN02657 189 ---------L-----------------------------LEFQRAKLKFEAELQALD-SDFTYSIVRPTAFFKSL----- 224 (390)
T ss_pred ---------c-----------------------------hHHHHHHHHHHHHHHhcc-CCCCEEEEccHHHhccc-----
Confidence 1 568899999999987622 38999999999988641
Q ss_pred CCCCCCCchHHHHHHHhcCceeEEeecCCccc-ccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHH
Q psy7538 264 GWTDNINGPTGLLIGAGKGVIRSMYCKNTGMA-DFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEIC 342 (543)
Q Consensus 264 gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~-d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~ 342 (543)
.+.+..+..|....+.++++..+ ++|+++|+|.+++.++..... .+++||++++. +.+|++|++
T Consensus 225 ---------~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~~-----~~~~~~Iggp~-~~~S~~Eia 289 (390)
T PLN02657 225 ---------GGQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDESK-----INKVLPIGGPG-KALTPLEQG 289 (390)
T ss_pred ---------HHHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCccc-----cCCEEEcCCCC-cccCHHHHH
Confidence 12344556677666788887654 679999999999988865443 36899998741 579999999
Q ss_pred HHHhhhhcCc
Q psy7538 343 DIGKDIVTSK 352 (543)
Q Consensus 343 ~~i~~~~G~~ 352 (543)
+.+.+.+|.+
T Consensus 290 ~~l~~~lG~~ 299 (390)
T PLN02657 290 EMLFRILGKE 299 (390)
T ss_pred HHHHHHhCCC
Confidence 9999999553
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.7e-26 Score=236.98 Aligned_cols=235 Identities=14% Similarity=0.178 Sum_probs=171.6
Q ss_pred CCEEEEE----cCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 30 NKSIFLS----GGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 30 ~~~VlIT----GatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
.++|||| |||||||++|++.|++.|+ +|++++|+..... .+ ..+-+.++... ...+++++.|
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~---~V~~l~R~~~~~~---~~----~~~~~~~~~~l----~~~~v~~v~~ 117 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGH---EVTLFTRGKEPSQ---KM----KKEPFSRFSEL----SSAGVKTVWG 117 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCC---EEEEEecCCcchh---hh----ccCchhhhhHh----hhcCceEEEe
Confidence 3789999 9999999999999999997 8899999864311 11 00111111100 0125889999
Q ss_pred cCCCCCCCCCHHHHHHHh--cCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCC-
Q psy7538 106 DITQLKLGISEIDKKELI--DNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEK- 182 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~--~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~- 182 (543)
|+.+ +..++ .++|+|||+++. ++.++.+++++|++. ++++|||+||+++++...
T Consensus 118 D~~d---------~~~~~~~~~~d~Vi~~~~~-------------~~~~~~~ll~aa~~~-gvkr~V~~SS~~vyg~~~~ 174 (378)
T PLN00016 118 DPAD---------VKSKVAGAGFDVVYDNNGK-------------DLDEVEPVADWAKSP-GLKQFLFCSSAGVYKKSDE 174 (378)
T ss_pred cHHH---------HHhhhccCCccEEEeCCCC-------------CHHHHHHHHHHHHHc-CCCEEEEEccHhhcCCCCC
Confidence 9875 22333 479999999763 245788999999997 899999999997776432
Q ss_pred -cccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCC
Q psy7538 183 -VLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEP 261 (543)
Q Consensus 183 -~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p 261 (543)
+..|... . +++. +|..+|.++++. +++++++||+.+||+....
T Consensus 175 ~p~~E~~~---~-----------------------------~p~~-sK~~~E~~l~~~---~l~~~ilRp~~vyG~~~~~ 218 (378)
T PLN00016 175 PPHVEGDA---V-----------------------------KPKA-GHLEVEAYLQKL---GVNWTSFRPQYIYGPGNNK 218 (378)
T ss_pred CCCCCCCc---C-----------------------------CCcc-hHHHHHHHHHHc---CCCeEEEeceeEECCCCCC
Confidence 2333211 1 2222 899999988754 8999999999999996431
Q ss_pred CCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHH
Q psy7538 262 LPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEI 341 (543)
Q Consensus 262 ~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~ 341 (543)
.....++..+..|....+++++++.++++|++|+|++++.++.++.. .+++||++++ +++|+.|+
T Consensus 219 --------~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~-----~~~~yni~~~--~~~s~~el 283 (378)
T PLN00016 219 --------DCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPKA-----AGQIFNIVSD--RAVTFDGM 283 (378)
T ss_pred --------chHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCccc-----cCCEEEecCC--CccCHHHH
Confidence 11122455566776666778889999999999999999999876543 3689999998 88999999
Q ss_pred HHHHhhhhcCc
Q psy7538 342 CDIGKDIVTSK 352 (543)
Q Consensus 342 ~~~i~~~~G~~ 352 (543)
++.+.+..|.+
T Consensus 284 ~~~i~~~~g~~ 294 (378)
T PLN00016 284 AKACAKAAGFP 294 (378)
T ss_pred HHHHHHHhCCC
Confidence 99999999654
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.1e-26 Score=274.83 Aligned_cols=288 Identities=20% Similarity=0.301 Sum_probs=202.9
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhC-CCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLE-PNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g-~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
.++|||||||||+|++|+++|++.+ ....+|++++|........+|+.+.+.... + .. .....+++++.||++
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~---~--~~-~~~~~~i~~~~gDl~ 1044 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYG---I--WD-EEWASRIEVVLGDLS 1044 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhC---C--Cc-hhhhcceEEEeccCC
Confidence 5899999999999999999999986 123489999998766555666654322110 0 00 122347999999999
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCc--ccc
Q psy7538 109 QLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKV--LEE 186 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~--i~E 186 (543)
++.+|++.+.+..+.+++|+|||+||.+++..++......|+.||.+++++|++. ++++|+|+||..+++.... ..+
T Consensus 1045 ~~~lgl~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~-~~~~~v~vSS~~v~~~~~~~~~~~ 1123 (1389)
T TIGR03443 1045 KEKFGLSDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEG-KAKQFSFVSSTSALDTEYYVNLSD 1123 (1389)
T ss_pred CccCCcCHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhC-CCceEEEEeCeeecCcccccchhh
Confidence 9999999999999999999999999999988888888889999999999999987 7899999999966643211 000
Q ss_pred cccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCCCCC
Q psy7538 187 RTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPGWT 266 (543)
Q Consensus 187 ~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~gw~ 266 (543)
........ .+.++. .. .......++.|+.||+.+|+++..+.+.|++++|+||+.|+|+...+ .|
T Consensus 1124 ~~~~~~~~---------~~~e~~--~~-~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g--~~- 1188 (1389)
T TIGR03443 1124 ELVQAGGA---------GIPESD--DL-MGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTG--AT- 1188 (1389)
T ss_pred hhhhccCC---------CCCccc--cc-ccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcC--CC-
Confidence 00000000 000000 00 00011234789999999999998876568999999999999986543 12
Q ss_pred CCCCchHHHHHHHhcCce-eEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHHHHH
Q psy7538 267 DNINGPTGLLIGAGKGVI-RSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEICDIG 345 (543)
Q Consensus 267 d~~~g~~~~~~~~~~g~~-~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~~~i 345 (543)
....++..+.++.. .....+.....|++||||+|++++.++..... . ..+.+||++++ .+++|.++++.+
T Consensus 1189 ----~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~-~--~~~~i~~~~~~--~~~~~~~~~~~l 1259 (1389)
T TIGR03443 1189 ----NTDDFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNPPK-E--SELAVAHVTGH--PRIRFNDFLGTL 1259 (1389)
T ss_pred ----CchhHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCCcc-c--CCCCEEEeCCC--CCCcHHHHHHHH
Confidence 12223333332221 11233456679999999999999998765431 1 13569999988 789999999999
Q ss_pred hhh
Q psy7538 346 KDI 348 (543)
Q Consensus 346 ~~~ 348 (543)
.+.
T Consensus 1260 ~~~ 1262 (1389)
T TIGR03443 1260 KTY 1262 (1389)
T ss_pred HHh
Confidence 765
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=227.37 Aligned_cols=240 Identities=20% Similarity=0.219 Sum_probs=172.7
Q ss_pred EEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhc-CcCCCCceEEEEccCCCCC
Q psy7538 33 IFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLR-GKSILQKIQVISGDITQLK 111 (543)
Q Consensus 33 VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~-~~~~~~~v~~i~gDl~~~~ 111 (543)
||||||+|.||+.|+++|++.+| ++|++++|+... +-++- ..++... .+.....+.++.||++|.+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p--~~lil~d~~E~~------l~~l~-----~~l~~~~~~~~v~~~~~~vigDvrd~~ 67 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGP--KKLILFDRDENK------LYELE-----RELRSRFPDPKVRFEIVPVIGDVRDKE 67 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB---SEEEEEES-HHH------HHHHH-----HHCHHHC--TTCEEEEE--CTSCCHHH
T ss_pred CEEEccccHHHHHHHHHHHhcCC--CeEEEeCCChhH------HHHHH-----HHHhhcccccCcccccCceeecccCHH
Confidence 79999999999999999999987 699999997422 21111 1111111 0111123456799999876
Q ss_pred CCCCHHHHHHHhc--CccEEEEcCccCCC---cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCcccc
Q psy7538 112 LGISEIDKKELID--NVDIVYHVAATIRF---DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEE 186 (543)
Q Consensus 112 lgls~~~~~~l~~--~vd~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i~E 186 (543)
.+..+++ ++|+|||.||.-+. +..+.+++++|+.||.|++++|.++ ++++||++||.-+..+
T Consensus 68 ------~l~~~~~~~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~-~v~~~v~ISTDKAv~P------ 134 (293)
T PF02719_consen 68 ------RLNRIFEEYKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEH-GVERFVFISTDKAVNP------ 134 (293)
T ss_dssp ------HHHHHTT--T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHT-T-SEEEEEEECGCSS-------
T ss_pred ------HHHHHHhhcCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEccccccCCC------
Confidence 7889998 89999999997653 4667889999999999999999998 8999999999844211
Q ss_pred cccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-c---CCcEEEEecCeeeecCCCCC
Q psy7538 187 RTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-L---GMPCMILRPSIVVPIYKEPL 262 (543)
Q Consensus 187 ~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~---~lp~~IlRps~V~G~~~~p~ 262 (543)
. |.||.||.++|+++..++. . +..++++|.|+|.|+.-.-+
T Consensus 135 -----------------------------t------nvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVi 179 (293)
T PF02719_consen 135 -----------------------------T------NVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVI 179 (293)
T ss_dssp ------------------------------------SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSCH
T ss_pred -----------------------------C------cHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcHH
Confidence 1 8999999999999999887 2 57999999999999854322
Q ss_pred CCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHH
Q psy7538 263 PGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEIC 342 (543)
Q Consensus 263 ~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~ 342 (543)
-.+..++.+|.+.+ .-+++..+=|+.+++++..++.|+..... +++|..--+ +|+++.|++
T Consensus 180 ----------p~F~~Qi~~g~PlT-vT~p~mtRffmti~EAv~Lvl~a~~~~~~------geifvl~mg--~~v~I~dlA 240 (293)
T PF02719_consen 180 ----------PLFKKQIKNGGPLT-VTDPDMTRFFMTIEEAVQLVLQAAALAKG------GEIFVLDMG--EPVKILDLA 240 (293)
T ss_dssp ----------HHHHHHHHTTSSEE-ECETT-EEEEE-HHHHHHHHHHHHHH--T------TEEEEE-----TCEECCCHH
T ss_pred ----------HHHHHHHHcCCcce-eCCCCcEEEEecHHHHHHHHHHHHhhCCC------CcEEEecCC--CCcCHHHHH
Confidence 24777888887765 45789999999999999999999877664 889999888 899999999
Q ss_pred HHHhhhhcCc
Q psy7538 343 DIGKDIVTSK 352 (543)
Q Consensus 343 ~~i~~~~G~~ 352 (543)
+.+.+..|..
T Consensus 241 ~~~i~~~g~~ 250 (293)
T PF02719_consen 241 EAMIELSGLE 250 (293)
T ss_dssp HHHHHHTT-E
T ss_pred HHHHhhcccc
Confidence 9999998643
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.94 E-value=7e-26 Score=227.97 Aligned_cols=235 Identities=16% Similarity=0.154 Sum_probs=162.6
Q ss_pred EEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCCCC
Q psy7538 33 IFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQLKL 112 (543)
Q Consensus 33 VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~~l 112 (543)
|||||||||||+++++.|++.|+ +|++++|+...... . ....+ .|+..
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~---------------------~-~~~~~----~~~~~--- 48 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGH---EVTILTRSPPAGAN---------------------T-KWEGY----KPWAP--- 48 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCC---EEEEEeCCCCCCCc---------------------c-cceee----ecccc---
Confidence 69999999999999999999986 89999998654210 0 00011 12211
Q ss_pred CCCHHHHHHHhcCccEEEEcCccCCCcc-----cHHHHHHHHHHHHHHHHHHHHhccCC--ceEEEEecCccccC--CCc
Q psy7538 113 GISEIDKKELIDNVDIVYHVAATIRFDE-----PIKTAVILNTRGTRDMLELSKQMKNL--KCFTYISTAYCHPS--EKV 183 (543)
Q Consensus 113 gls~~~~~~l~~~vd~ViH~AA~v~~~~-----~~~~~~~~Nv~gt~~ll~~a~~~~~l--~~~V~vST~y~~~~--~~~ 183 (543)
+.....+.++|+|||+||...... ......++|+.++.+++++|++. ++ ..||++||.++++. ..+
T Consensus 49 ----~~~~~~~~~~D~Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~i~~S~~~~yg~~~~~~ 123 (292)
T TIGR01777 49 ----LAESEALEGADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAA-EQKPKVFISASAVGYYGTSEDRV 123 (292)
T ss_pred ----cchhhhcCCCCEEEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhc-CCCceEEEEeeeEEEeCCCCCCC
Confidence 134455678999999999764321 23457889999999999999998 54 46777777655543 234
Q ss_pred ccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCC
Q psy7538 184 LEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLP 263 (543)
Q Consensus 184 i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~ 263 (543)
++|+..+.+. +.|+..+...|..+....+.+++++|+||+.|||+..
T Consensus 124 ~~E~~~~~~~-----------------------------~~~~~~~~~~e~~~~~~~~~~~~~~ilR~~~v~G~~~---- 170 (292)
T TIGR01777 124 FTEEDSPAGD-----------------------------DFLAELCRDWEEAAQAAEDLGTRVVLLRTGIVLGPKG---- 170 (292)
T ss_pred cCcccCCCCC-----------------------------ChHHHHHHHHHHHhhhchhcCCceEEEeeeeEECCCc----
Confidence 5565322111 3456666667777664433479999999999999853
Q ss_pred CCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHHH
Q psy7538 264 GWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEICD 343 (543)
Q Consensus 264 gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~~ 343 (543)
++. ..++........ ...+++++.+++||++|+|+++..++..... .++||++++ +++|++|+++
T Consensus 171 ~~~------~~~~~~~~~~~~-~~~g~~~~~~~~i~v~Dva~~i~~~l~~~~~------~g~~~~~~~--~~~s~~di~~ 235 (292)
T TIGR01777 171 GAL------AKMLPPFRLGLG-GPLGSGRQWFSWIHIEDLVQLILFALENASI------SGPVNATAP--EPVRNKEFAK 235 (292)
T ss_pred chh------HHHHHHHhcCcc-cccCCCCcccccEeHHHHHHHHHHHhcCccc------CCceEecCC--CccCHHHHHH
Confidence 111 111211111111 1257789999999999999999999876443 458999998 8999999999
Q ss_pred HHhhhhcCc
Q psy7538 344 IGKDIVTSK 352 (543)
Q Consensus 344 ~i~~~~G~~ 352 (543)
.+.+.+|..
T Consensus 236 ~i~~~~g~~ 244 (292)
T TIGR01777 236 ALARALHRP 244 (292)
T ss_pred HHHHHhCCC
Confidence 999999543
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-25 Score=226.12 Aligned_cols=228 Identities=21% Similarity=0.194 Sum_probs=161.8
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+||||||+||||++|++.|.+.|+ .|+...|+ ..|+++.
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~---~v~~~~r~-------------------------------------~~dl~d~ 40 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGY---EVIATSRS-------------------------------------DLDLTDP 40 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSE---EEEEESTT-------------------------------------CS-TTSH
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCC---EEEEeCch-------------------------------------hcCCCCH
Confidence 7999999999999999999998875 67766553 3577765
Q ss_pred CCCCCHHHHHHHhc--CccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC--Cc
Q psy7538 111 KLGISEIDKKELID--NVDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE--KV 183 (543)
Q Consensus 111 ~lgls~~~~~~l~~--~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~--~~ 183 (543)
+ .+..+++ .+|+||||||..+.+ ...+.++++|+.++.+|+++|.+. + .++||+||.+++... .+
T Consensus 41 ~------~~~~~~~~~~pd~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~-~-~~li~~STd~VFdG~~~~~ 112 (286)
T PF04321_consen 41 E------AVAKLLEAFKPDVVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKER-G-ARLIHISTDYVFDGDKGGP 112 (286)
T ss_dssp H------HHHHHHHHH--SEEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHC-T--EEEEEEEGGGS-SSTSSS
T ss_pred H------HHHHHHHHhCCCeEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHc-C-CcEEEeeccEEEcCCcccc
Confidence 4 6777766 489999999987653 456779999999999999999997 4 499999999988654 25
Q ss_pred ccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCC
Q psy7538 184 LEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLP 263 (543)
Q Consensus 184 i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~ 263 (543)
..|+..+.|. |.||.+|+++|+.+++.. -...|+|++.+||....
T Consensus 113 y~E~d~~~P~-----------------------------~~YG~~K~~~E~~v~~~~---~~~~IlR~~~~~g~~~~--- 157 (286)
T PF04321_consen 113 YTEDDPPNPL-----------------------------NVYGRSKLEGEQAVRAAC---PNALILRTSWVYGPSGR--- 157 (286)
T ss_dssp B-TTS----S-----------------------------SHHHHHHHHHHHHHHHH----SSEEEEEE-SEESSSSS---
T ss_pred cccCCCCCCC-----------------------------CHHHHHHHHHHHHHHHhc---CCEEEEecceecccCCC---
Confidence 7787776666 899999999999999864 38999999999999332
Q ss_pred CCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHHH
Q psy7538 264 GWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEICD 343 (543)
Q Consensus 264 gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~~ 343 (543)
+-...++..+..|....+ ..+.....++++|+|++++.++.+... + ....++||++++ +.+|+.|+++
T Consensus 158 ------~~~~~~~~~~~~~~~i~~--~~d~~~~p~~~~dlA~~i~~l~~~~~~-~-~~~~Giyh~~~~--~~~S~~e~~~ 225 (286)
T PF04321_consen 158 ------NFLRWLLRRLRQGEPIKL--FDDQYRSPTYVDDLARVILELIEKNLS-G-ASPWGIYHLSGP--ERVSRYEFAE 225 (286)
T ss_dssp ------SHHHHHHHHHHCTSEEEE--ESSCEE--EEHHHHHHHHHHHHHHHHH---GGG-EEEE---B--S-EEHHHHHH
T ss_pred ------chhhhHHHHHhcCCeeEe--eCCceeCCEEHHHHHHHHHHHHHhccc-c-cccceeEEEecC--cccCHHHHHH
Confidence 112335555666665543 457789999999999999999987653 1 113579999999 8999999999
Q ss_pred HHhhhhcCcc
Q psy7538 344 IGKDIVTSKI 353 (543)
Q Consensus 344 ~i~~~~G~~~ 353 (543)
.+.+.+|...
T Consensus 226 ~i~~~~~~~~ 235 (286)
T PF04321_consen 226 AIAKILGLDP 235 (286)
T ss_dssp HHHHHHTHCT
T ss_pred HHHHHhCCCC
Confidence 9999996554
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.9e-24 Score=209.19 Aligned_cols=220 Identities=22% Similarity=0.223 Sum_probs=178.5
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|||||++|.+|+.|++.|. .+. +|+.+.|+. .|++++
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~~---~v~a~~~~~-------------------------------------~Ditd~ 39 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GEF---EVIATDRAE-------------------------------------LDITDP 39 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CCc---eEEeccCcc-------------------------------------ccccCh
Confidence 459999999999999999987 323 677777641 689988
Q ss_pred CCCCCHHHHHHHhc--CccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCC--c
Q psy7538 111 KLGISEIDKKELID--NVDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEK--V 183 (543)
Q Consensus 111 ~lgls~~~~~~l~~--~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~--~ 183 (543)
+ .+.++++ ++|+|||+||.+..+ ...+.++.+|..|+.++.++|++. + -.+||+||.|+..... +
T Consensus 40 ~------~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~-g-a~lVhiSTDyVFDG~~~~~ 111 (281)
T COG1091 40 D------AVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEV-G-ARLVHISTDYVFDGEKGGP 111 (281)
T ss_pred H------HHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHh-C-CeEEEeecceEecCCCCCC
Confidence 6 6777777 479999999998765 335679999999999999999998 4 5899999999976544 6
Q ss_pred ccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCC
Q psy7538 184 LEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLP 263 (543)
Q Consensus 184 i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~ 263 (543)
..|+..+.|. |.||.||.++|+.+.++ +-...|+|.+.|||....
T Consensus 112 Y~E~D~~~P~-----------------------------nvYG~sKl~GE~~v~~~---~~~~~I~Rtswv~g~~g~--- 156 (281)
T COG1091 112 YKETDTPNPL-----------------------------NVYGRSKLAGEEAVRAA---GPRHLILRTSWVYGEYGN--- 156 (281)
T ss_pred CCCCCCCCCh-----------------------------hhhhHHHHHHHHHHHHh---CCCEEEEEeeeeecCCCC---
Confidence 8888888877 89999999999999998 458899999999998642
Q ss_pred CCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHHH
Q psy7538 264 GWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEICD 343 (543)
Q Consensus 264 gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~~ 343 (543)
|+ ...++.....|... ....++....+++.|+|.++..++..... +++||+++. ..+||-|+++
T Consensus 157 ----nF--v~tml~la~~~~~l--~vv~Dq~gsPt~~~dlA~~i~~ll~~~~~------~~~yH~~~~--g~~Swydfa~ 220 (281)
T COG1091 157 ----NF--VKTMLRLAKEGKEL--KVVDDQYGSPTYTEDLADAILELLEKEKE------GGVYHLVNS--GECSWYEFAK 220 (281)
T ss_pred ----CH--HHHHHHHhhcCCce--EEECCeeeCCccHHHHHHHHHHHHhcccc------CcEEEEeCC--CcccHHHHHH
Confidence 21 12244445555443 34467889999999999999998877654 559999998 7789999999
Q ss_pred HHhhhhc
Q psy7538 344 IGKDIVT 350 (543)
Q Consensus 344 ~i~~~~G 350 (543)
.+.+..|
T Consensus 221 ~I~~~~~ 227 (281)
T COG1091 221 AIFEEAG 227 (281)
T ss_pred HHHHHhC
Confidence 9999985
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.6e-25 Score=244.97 Aligned_cols=202 Identities=16% Similarity=0.179 Sum_probs=158.0
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|+|||||||||++++++|++.|+ +|++++|+.... ...++.++.+|++++
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~---~Vv~l~R~~~~~-------------------------~~~~v~~v~gDL~D~ 52 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGH---EVVGIARHRPDS-------------------------WPSSADFIAADIRDA 52 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcC---EEEEEECCchhh-------------------------cccCceEEEeeCCCH
Confidence 5899999999999999999999987 788888864210 112577899999987
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCcccccccC
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYL 190 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i~E~~y~ 190 (543)
+ ++..+++++|+|||+|+.... ..++|+.|+.+++++|++. ++++||++||.
T Consensus 53 ~------~l~~al~~vD~VVHlAa~~~~------~~~vNv~GT~nLLeAa~~~-gvkr~V~iSS~--------------- 104 (854)
T PRK05865 53 T------AVESAMTGADVVAHCAWVRGR------NDHINIDGTANVLKAMAET-GTGRIVFTSSG--------------- 104 (854)
T ss_pred H------HHHHHHhCCCEEEECCCcccc------hHHHHHHHHHHHHHHHHHc-CCCeEEEECCc---------------
Confidence 5 788888999999999986432 4689999999999999997 78999999984
Q ss_pred CCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCCCCCCCCC
Q psy7538 191 PPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPGWTDNIN 270 (543)
Q Consensus 191 ~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~gw~d~~~ 270 (543)
. |..+|+++.++ +++++|+||++|||+.. +
T Consensus 105 --------------------------------~-----K~aaE~ll~~~---gl~~vILRp~~VYGP~~---~------- 134 (854)
T PRK05865 105 --------------------------------H-----QPRVEQMLADC---GLEWVAVRCALIFGRNV---D------- 134 (854)
T ss_pred --------------------------------H-----HHHHHHHHHHc---CCCEEEEEeceEeCCCh---H-------
Confidence 1 77889888654 89999999999999842 1
Q ss_pred chHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHHHHHhhhh
Q psy7538 271 GPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEICDIGKDIV 349 (543)
Q Consensus 271 g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~~~i~~~~ 349 (543)
.++..+.. ......++++..+|+|||+|+|++++.++..... .+++||++++ +++|+.|+++.+.+..
T Consensus 135 ---~~i~~ll~-~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~-----~ggvyNIgsg--~~~Si~EIae~l~~~~ 202 (854)
T PRK05865 135 ---NWVQRLFA-LPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVI-----DSGPVNLAAP--GELTFRRIAAALGRPM 202 (854)
T ss_pred ---HHHHHHhc-CceeccCCCCceEeeeeHHHHHHHHHHHHhCCCc-----CCCeEEEECC--CcccHHHHHHHHhhhh
Confidence 12222221 1111234456677999999999999988864432 2569999998 8899999999887643
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-24 Score=220.13 Aligned_cols=216 Identities=14% Similarity=0.131 Sum_probs=150.7
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
.|+|||||||||||++|+++|+++|+ +|.... +|+.+
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~---~V~~~~----------------------------------------~~~~~ 45 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGI---DFHYGS----------------------------------------GRLEN 45 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCC---EEEEec----------------------------------------CccCC
Confidence 47999999999999999999999987 443321 11222
Q ss_pred CCCCCCHHHHHHHhc--CccEEEEcCccCCC------cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccc--c
Q psy7538 110 LKLGISEIDKKELID--NVDIVYHVAATIRF------DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCH--P 179 (543)
Q Consensus 110 ~~lgls~~~~~~l~~--~vd~ViH~AA~v~~------~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~--~ 179 (543)
.+ .+...++ ++|+||||||.... ..+...++++|+.||.+++++|++. +++ ++++||.+++ .
T Consensus 46 ~~------~v~~~l~~~~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~-gv~-~v~~sS~~vy~~~ 117 (298)
T PLN02778 46 RA------SLEADIDAVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRER-GLV-LTNYATGCIFEYD 117 (298)
T ss_pred HH------HHHHHHHhcCCCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCC-EEEEecceEeCCC
Confidence 11 2333333 68999999997642 2345678999999999999999998 776 5566665433 2
Q ss_pred CCC------cccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCe
Q psy7538 180 SEK------VLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSI 253 (543)
Q Consensus 180 ~~~------~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~ 253 (543)
... ++.|+..+.+ ..+.|+.||.++|+++..+. +..++|+++
T Consensus 118 ~~~p~~~~~~~~Ee~~p~~----------------------------~~s~Yg~sK~~~E~~~~~y~----~~~~lr~~~ 165 (298)
T PLN02778 118 DAHPLGSGIGFKEEDTPNF----------------------------TGSFYSKTKAMVEELLKNYE----NVCTLRVRM 165 (298)
T ss_pred CCCCcccCCCCCcCCCCCC----------------------------CCCchHHHHHHHHHHHHHhh----ccEEeeecc
Confidence 211 2344322211 11789999999999998874 456888877
Q ss_pred eeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCC
Q psy7538 254 VVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKD 333 (543)
Q Consensus 254 V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~ 333 (543)
++|... ..+..++..+..+......+ .++++++|++++++.++.... .++||++++
T Consensus 166 ~~~~~~----------~~~~~fi~~~~~~~~~~~~~-----~s~~yv~D~v~al~~~l~~~~-------~g~yNigs~-- 221 (298)
T PLN02778 166 PISSDL----------SNPRNFITKITRYEKVVNIP-----NSMTILDELLPISIEMAKRNL-------TGIYNFTNP-- 221 (298)
T ss_pred cCCccc----------ccHHHHHHHHHcCCCeeEcC-----CCCEEHHHHHHHHHHHHhCCC-------CCeEEeCCC--
Confidence 776531 12234666666665433222 379999999999999875422 359999998
Q ss_pred CcccHHHHHHHHhhhhcCc
Q psy7538 334 YKITWQEICDIGKDIVTSK 352 (543)
Q Consensus 334 ~~~t~~e~~~~i~~~~G~~ 352 (543)
.++|+.|+++.+++.+|..
T Consensus 222 ~~iS~~el~~~i~~~~~~~ 240 (298)
T PLN02778 222 GVVSHNEILEMYRDYIDPS 240 (298)
T ss_pred CcccHHHHHHHHHHHhCCC
Confidence 8999999999999999543
|
|
| >PF03015 Sterile: Male sterility protein; InterPro: IPR004262 This family represents the C-terminal region of the male sterility protein in a number of organisms | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.6e-25 Score=182.62 Aligned_cols=94 Identities=33% Similarity=0.710 Sum_probs=92.1
Q ss_pred HHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHhhccccccccCeEEEeCccHHHHhhhCCccccccccccCCCCCHHHHH
Q psy7538 379 LFHWIPAYFLDAVILISGNKPCLVRIQERIHRGFDVFEYYANNEWEFKNGNLHQTRPKRNAREIVQYCVENDNVDIVKYF 458 (543)
Q Consensus 379 ~~~~~p~~~~d~~~~~~G~kP~~~~~~~~l~~~~~~~~~f~~~~w~f~~~n~~~l~~~l~~~d~~~F~~d~~~i~w~~Y~ 458 (543)
++|++||+++|.++++.|++|++.++++++.++.++++||+.++|.|+++|+++|++.|+++||++|+||+++|||++|+
T Consensus 1 ~~h~lPA~~~D~~~~l~g~kp~~~k~~~ki~~~~~~~~~F~~~eW~F~~~n~~~L~~~l~~~D~~~F~fD~~~idW~~Y~ 80 (94)
T PF03015_consen 1 LFHFLPAYLLDLILRLFGQKPRMVKIYRKIRKALEVLEYFTTNEWIFDNDNTRRLWERLSPEDREIFNFDIRSIDWEEYF 80 (94)
T ss_pred CcchHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhCceeecchHHHHHHHhCchhcCceecCCCCCCCHHHHH
Confidence 36889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCC
Q psy7538 459 EKAVYGARYFLMKE 472 (543)
Q Consensus 459 ~~~~~G~r~y~~ke 472 (543)
.+|+.|+|+|++||
T Consensus 81 ~~~~~G~rkyllke 94 (94)
T PF03015_consen 81 RNYIPGIRKYLLKE 94 (94)
T ss_pred HHHHHHHHHHHhCC
Confidence 99999999999998
|
The Arabidopsis thaliana male sterility 2 (MS2) protein is involved in male gametogenesis. The MS2 protein shows sequence similarity to a jojoba protein (also a member of this group) that converts wax fatty acids to fatty alcohols. It has been suggested that a possible function of the MS2 protein may be as a fatty acyl reductase in the formation of pollen wall substances [].; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0055114 oxidation-reduction process |
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1e-21 Score=186.81 Aligned_cols=231 Identities=16% Similarity=0.218 Sum_probs=157.9
Q ss_pred EEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCCCC
Q psy7538 33 IFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQLKL 112 (543)
Q Consensus 33 VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~~l 112 (543)
|+|||||||||++|+..|.+.|| +|++++|++...+. .....+....
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh---~v~iltR~~~~~~~----------------------~~~~~v~~~~-------- 47 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGH---QVTILTRRPPKASQ----------------------NLHPNVTLWE-------- 47 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCC---eEEEEEcCCcchhh----------------------hcCccccccc--------
Confidence 68999999999999999999998 89999998754320 1111111111
Q ss_pred CCCHHHHHHHhc-CccEEEEcCccCC----CcccHHH-HHHHHHHHHHHHHHHHHhcc-CCceEEEEecC--ccccCCCc
Q psy7538 113 GISEIDKKELID-NVDIVYHVAATIR----FDEPIKT-AVILNTRGTRDMLELSKQMK-NLKCFTYISTA--YCHPSEKV 183 (543)
Q Consensus 113 gls~~~~~~l~~-~vd~ViH~AA~v~----~~~~~~~-~~~~Nv~gt~~ll~~a~~~~-~l~~~V~vST~--y~~~~~~~ 183 (543)
.+..+.. ++|+|||+||..- +++..++ ..+.-+..|+.|.++..++. +++.||.-|.+ |++.....
T Consensus 48 -----~~~~~~~~~~DavINLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~ 122 (297)
T COG1090 48 -----GLADALTLGIDAVINLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRV 122 (297)
T ss_pred -----hhhhcccCCCCEEEECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCcee
Confidence 2333334 7999999999753 4444443 67888999999999998653 45667766666 66555556
Q ss_pred ccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchH-HHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCC
Q psy7538 184 LEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSY-AYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPL 262 (543)
Q Consensus 184 i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y-~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~ 262 (543)
++|+..+ - +.+ +..=..=|+...+....|.+++++|.|+|.|+...
T Consensus 123 ~tE~~~~--g-----------------------------~~Fla~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GG-- 169 (297)
T COG1090 123 VTEESPP--G-----------------------------DDFLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGG-- 169 (297)
T ss_pred eecCCCC--C-----------------------------CChHHHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCc--
Confidence 7776211 1 111 11111223333333334889999999999997531
Q ss_pred CCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHH
Q psy7538 263 PGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEIC 342 (543)
Q Consensus 263 ~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~ 342 (543)
..+ .++.....|.- --.|+|.+..+|||+||+++++..++.+... ...||++++ +|++..+|.
T Consensus 170 ------aL~--~m~~~fk~glG-G~~GsGrQ~~SWIhieD~v~~I~fll~~~~l------sGp~N~taP--~PV~~~~F~ 232 (297)
T COG1090 170 ------ALG--KMLPLFKLGLG-GKLGSGRQWFSWIHIEDLVNAILFLLENEQL------SGPFNLTAP--NPVRNKEFA 232 (297)
T ss_pred ------chh--hhcchhhhccC-CccCCCCceeeeeeHHHHHHHHHHHHhCcCC------CCcccccCC--CcCcHHHHH
Confidence 111 12222222221 1268999999999999999999999998765 458999999 999999999
Q ss_pred HHHhhhhcCc
Q psy7538 343 DIGKDIVTSK 352 (543)
Q Consensus 343 ~~i~~~~G~~ 352 (543)
+.+.+.+ .+
T Consensus 233 ~al~r~l-~R 241 (297)
T COG1090 233 HALGRAL-HR 241 (297)
T ss_pred HHHHHHh-CC
Confidence 9999999 54
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.8e-22 Score=216.19 Aligned_cols=203 Identities=13% Similarity=0.137 Sum_probs=148.2
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|+|||||||||++|+++|++.|+ +|.+++|.... ....+++++.+|++++
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~---~Vi~ldr~~~~-------------------------~~~~~ve~v~~Dl~d~ 52 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGH---TVSGIAQHPHD-------------------------ALDPRVDYVCASLRNP 52 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC---EEEEEeCChhh-------------------------cccCCceEEEccCCCH
Confidence 5899999999999999999999987 78888885421 1123678999999986
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCcccccccC
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYL 190 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i~E~~y~ 190 (543)
. +..++.++|+|||+|+.... . ...+|+.|+.+++++|++. ++ ++||+||+++..
T Consensus 53 ~-------l~~al~~~D~VIHLAa~~~~-~----~~~vNv~Gt~nLleAA~~~-Gv-RiV~~SS~~G~~----------- 107 (699)
T PRK12320 53 V-------LQELAGEADAVIHLAPVDTS-A----PGGVGITGLAHVANAAARA-GA-RLLFVSQAAGRP----------- 107 (699)
T ss_pred H-------HHHHhcCCCEEEEcCccCcc-c----hhhHHHHHHHHHHHHHHHc-CC-eEEEEECCCCCC-----------
Confidence 3 66777899999999986421 1 2358999999999999998 66 799999985321
Q ss_pred CCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCCCCCCCCC
Q psy7538 191 PPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPGWTDNIN 270 (543)
Q Consensus 191 ~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~gw~d~~~ 270 (543)
..|. .+|.++..+ +++++|+|+++|||+...+.
T Consensus 108 --------------------------------~~~~----~aE~ll~~~---~~p~~ILR~~nVYGp~~~~~-------- 140 (699)
T PRK12320 108 --------------------------------ELYR----QAETLVSTG---WAPSLVIRIAPPVGRQLDWM-------- 140 (699)
T ss_pred --------------------------------cccc----HHHHHHHhc---CCCEEEEeCceecCCCCccc--------
Confidence 1121 367766553 68999999999999854320
Q ss_pred chHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHHHHHhhhh
Q psy7538 271 GPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEICDIGKDIV 349 (543)
Q Consensus 271 g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~~~i~~~~ 349 (543)
...++........ ......+|||||++++++.++.... ..+||++++ +.+|+.|+++.+....
T Consensus 141 -~~r~I~~~l~~~~------~~~pI~vIyVdDvv~alv~al~~~~-------~GiyNIG~~--~~~Si~el~~~i~~~~ 203 (699)
T PRK12320 141 -VCRTVATLLRSKV------SARPIRVLHLDDLVRFLVLALNTDR-------NGVVDLATP--DTTNVVTAWRLLRSVD 203 (699)
T ss_pred -HhHHHHHHHHHHH------cCCceEEEEHHHHHHHHHHHHhCCC-------CCEEEEeCC--CeeEHHHHHHHHHHhC
Confidence 1122222222110 1223345999999999998886532 349999999 8999999999887653
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-20 Score=189.43 Aligned_cols=209 Identities=14% Similarity=0.173 Sum_probs=150.8
Q ss_pred EEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCCC
Q psy7538 32 SIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQLK 111 (543)
Q Consensus 32 ~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~~ 111 (543)
+|+||||||++|++++++|++.|+ +|++++|+.+... ..+++.+.+|+.|++
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~---~V~~~~R~~~~~~-------------------------~~~~~~~~~d~~d~~ 52 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASV---PFLVASRSSSSSA-------------------------GPNEKHVKFDWLDED 52 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCC---cEEEEeCCCcccc-------------------------CCCCccccccCCCHH
Confidence 489999999999999999999987 7899999875321 135667789999886
Q ss_pred CCCCHHHHHHHh------cC-ccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCcc
Q psy7538 112 LGISEIDKKELI------DN-VDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVL 184 (543)
Q Consensus 112 lgls~~~~~~l~------~~-vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i 184 (543)
.+..++ ++ +|.|||+++.... . ...+.+++++|++. ++++||++||..+....
T Consensus 53 ------~l~~a~~~~~~~~g~~d~v~~~~~~~~~--~--------~~~~~~~i~aa~~~-gv~~~V~~Ss~~~~~~~--- 112 (285)
T TIGR03649 53 ------TWDNPFSSDDGMEPEISAVYLVAPPIPD--L--------APPMIKFIDFARSK-GVRRFVLLSASIIEKGG--- 112 (285)
T ss_pred ------HHHHHHhcccCcCCceeEEEEeCCCCCC--h--------hHHHHHHHHHHHHc-CCCEEEEeeccccCCCC---
Confidence 788877 57 9999999875431 1 23456899999998 89999999997543210
Q ss_pred cccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCCC
Q psy7538 185 EERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPG 264 (543)
Q Consensus 185 ~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~g 264 (543)
..+...|+.+.+. .+++++++||+.++.....+.
T Consensus 113 ------------------------------------------~~~~~~~~~l~~~--~gi~~tilRp~~f~~~~~~~~-- 146 (285)
T TIGR03649 113 ------------------------------------------PAMGQVHAHLDSL--GGVEYTVLRPTWFMENFSEEF-- 146 (285)
T ss_pred ------------------------------------------chHHHHHHHHHhc--cCCCEEEEeccHHhhhhcccc--
Confidence 0111233333332 289999999997775421110
Q ss_pred CCCCCCchHHHHHHHhc-CceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHHH
Q psy7538 265 WTDNINGPTGLLIGAGK-GVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEICD 343 (543)
Q Consensus 265 w~d~~~g~~~~~~~~~~-g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~~ 343 (543)
....+.. |. ...+.++...++|+++|+++++..++..+.. .+++|+++++ +++|+.|+++
T Consensus 147 ----------~~~~~~~~~~--~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~-----~~~~~~l~g~--~~~s~~eia~ 207 (285)
T TIGR03649 147 ----------HVEAIRKENK--IYSATGDGKIPFVSADDIARVAYRALTDKVA-----PNTDYVVLGP--ELLTYDDVAE 207 (285)
T ss_pred ----------cccccccCCe--EEecCCCCccCcccHHHHHHHHHHHhcCCCc-----CCCeEEeeCC--ccCCHHHHHH
Confidence 0111112 22 2345678899999999999999988876543 3678999988 8999999999
Q ss_pred HHhhhhcCcc
Q psy7538 344 IGKDIVTSKI 353 (543)
Q Consensus 344 ~i~~~~G~~~ 353 (543)
.+.+.+|++.
T Consensus 208 ~l~~~~g~~v 217 (285)
T TIGR03649 208 ILSRVLGRKI 217 (285)
T ss_pred HHHHHhCCce
Confidence 9999996653
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.2e-20 Score=211.58 Aligned_cols=214 Identities=14% Similarity=0.117 Sum_probs=151.3
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
..|+|||||||||||++|++.|.+.|++ |. +..+|++
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~---v~----------------------------------------~~~~~l~ 415 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEKQGIA---YE----------------------------------------YGKGRLE 415 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHhCCCe---EE----------------------------------------eeccccc
Confidence 4589999999999999999999998763 31 1123455
Q ss_pred CCCCCCCHHHHHHHhc--CccEEEEcCccCC---Cc---ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccC
Q psy7538 109 QLKLGISEIDKKELID--NVDIVYHVAATIR---FD---EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPS 180 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~--~vd~ViH~AA~v~---~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~ 180 (543)
+++ .+...++ ++|+||||||... .+ .....++++|+.||.+|+++|++. +++ +||+||.++++.
T Consensus 416 d~~------~v~~~i~~~~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~-g~~-~v~~Ss~~v~~~ 487 (668)
T PLN02260 416 DRS------SLLADIRNVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCREN-GLL-MMNFATGCIFEY 487 (668)
T ss_pred cHH------HHHHHHHhhCCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHc-CCe-EEEEcccceecC
Confidence 543 4555554 6899999999763 22 345678999999999999999998 775 678888766532
Q ss_pred --------CCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecC
Q psy7538 181 --------EKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPS 252 (543)
Q Consensus 181 --------~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps 252 (543)
..++.|+..+.|. .|.|+.||.++|+++..+. ...++|+.
T Consensus 488 ~~~~~~~~~~p~~E~~~~~~~----------------------------~~~Yg~sK~~~E~~~~~~~----~~~~~r~~ 535 (668)
T PLN02260 488 DAKHPEGSGIGFKEEDKPNFT----------------------------GSFYSKTKAMVEELLREYD----NVCTLRVR 535 (668)
T ss_pred CcccccccCCCCCcCCCCCCC----------------------------CChhhHHHHHHHHHHHhhh----hheEEEEE
Confidence 1244554322211 1799999999999998873 46788888
Q ss_pred eeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCC
Q psy7538 253 IVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNK 332 (543)
Q Consensus 253 ~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~ 332 (543)
.+||... .++..++..+.++...... ..+...+||++.+++.++.. . .+++||++++
T Consensus 536 ~~~~~~~----------~~~~nfv~~~~~~~~~~~v-----p~~~~~~~~~~~~~~~l~~~-~------~~giyni~~~- 592 (668)
T PLN02260 536 MPISSDL----------SNPRNFITKISRYNKVVNI-----PNSMTVLDELLPISIEMAKR-N------LRGIWNFTNP- 592 (668)
T ss_pred EecccCC----------CCccHHHHHHhccceeecc-----CCCceehhhHHHHHHHHHHh-C------CCceEEecCC-
Confidence 8887532 1223455555544332111 13467789999888777753 2 2569999998
Q ss_pred CCcccHHHHHHHHhhhh
Q psy7538 333 DYKITWQEICDIGKDIV 349 (543)
Q Consensus 333 ~~~~t~~e~~~~i~~~~ 349 (543)
.++||.|+++.+.+..
T Consensus 593 -~~~s~~e~a~~i~~~~ 608 (668)
T PLN02260 593 -GVVSHNEILEMYKDYI 608 (668)
T ss_pred -CcCcHHHHHHHHHHhc
Confidence 8899999999999887
|
|
| >KOG1431|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.5e-20 Score=172.45 Aligned_cols=292 Identities=14% Similarity=0.181 Sum_probs=202.6
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
.|+|||||+||.+|++|++.+...|++-.+- ++.-++ .+|+++
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~w-vf~~sk------------------------------------d~DLt~ 43 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENW-VFIGSK------------------------------------DADLTN 43 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCCCCcce-EEeccc------------------------------------cccccc
Confidence 3799999999999999999999987632222 222111 357776
Q ss_pred CCCCCCHHHHHHHhc--CccEEEEcCccCCC----cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC--
Q psy7538 110 LKLGISEIDKKELID--NVDIVYHVAATIRF----DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE-- 181 (543)
Q Consensus 110 ~~lgls~~~~~~l~~--~vd~ViH~AA~v~~----~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~-- 181 (543)
.. +.+.+++ .+..|||+||.+.- ....-++++.|+.-.-|++..|.+. +++++|.+.|...+++.
T Consensus 44 ~a------~t~~lF~~ekPthVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~-gv~K~vsclStCIfPdkt~ 116 (315)
T KOG1431|consen 44 LA------DTRALFESEKPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEH-GVKKVVSCLSTCIFPDKTS 116 (315)
T ss_pred hH------HHHHHHhccCCceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHh-chhhhhhhcceeecCCCCC
Confidence 54 7788876 57899999998752 2333578999999999999999998 88888888777666554
Q ss_pred CcccccccC-CCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCC
Q psy7538 182 KVLEERTYL-PPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYK 259 (543)
Q Consensus 182 ~~i~E~~y~-~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~ 259 (543)
.+|+|+... -|..|. .-.|++.|.++.-.-+.|.. +|-..+.+-|.+|||+.+
T Consensus 117 yPIdEtmvh~gpphps-------------------------N~gYsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphD 171 (315)
T KOG1431|consen 117 YPIDETMVHNGPPHPS-------------------------NFGYSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHD 171 (315)
T ss_pred CCCCHHHhccCCCCCC-------------------------chHHHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCC
Confidence 478876321 111110 13789999998877777777 899999999999999987
Q ss_pred CCCCCCCCCCCchHHHHHH----HhcCc-eeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCC
Q psy7538 260 EPLPGWTDNINGPTGLLIG----AGKGV-IRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDY 334 (543)
Q Consensus 260 ~p~~gw~d~~~g~~~~~~~----~~~g~-~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~ 334 (543)
.--|. +-.-.-+++.. -..|. ...++|.|...+.|+|+||+|++++..+..-.. .+..+++++..+
T Consensus 172 Nfnpe---~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~i~vlr~Y~~------vEpiils~ge~~ 242 (315)
T KOG1431|consen 172 NFNPE---NSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLFIWVLREYEG------VEPIILSVGESD 242 (315)
T ss_pred CCCcc---cccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHHHHHHHhhcC------ccceEeccCccc
Confidence 32221 10111123332 23444 567899999999999999999999998876543 456788888667
Q ss_pred cccHHHHHHHHhhhhcCccCCCCccccCccccccchhHHHHHHHHHhhhHHHHHH-HHHHHhCCCchhhHHHHHHHHhhc
Q psy7538 335 KITWQEICDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFICCLLFHWIPAYFLD-AVILISGNKPCLVRIQERIHRGFD 413 (543)
Q Consensus 335 ~~t~~e~~~~i~~~~G~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~d-~~~~~~G~kP~~~~~~~~l~~~~~ 413 (543)
.+|++|+++.+.+..|-.-.+..-...|.+.+ ...++ .-++.++|.|+++.+...+. +
T Consensus 243 EVtI~e~aeaV~ea~~F~G~l~~DttK~DGq~------------------kKtasnsKL~sl~pd~~ft~l~~ai~---~ 301 (315)
T KOG1431|consen 243 EVTIREAAEAVVEAVDFTGKLVWDTTKSDGQF------------------KKTASNSKLRSLLPDFKFTPLEQAIS---E 301 (315)
T ss_pred eeEHHHHHHHHHHHhCCCceEEeeccCCCCCc------------------ccccchHHHHHhCCCcccChHHHHHH---H
Confidence 99999999999999854433222222333321 11222 23577899999987655554 4
Q ss_pred ccccccc
Q psy7538 414 VFEYYAN 420 (543)
Q Consensus 414 ~~~~f~~ 420 (543)
+++||..
T Consensus 302 t~~Wy~~ 308 (315)
T KOG1431|consen 302 TVQWYLD 308 (315)
T ss_pred HHHHHHH
Confidence 6667753
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.6e-20 Score=176.76 Aligned_cols=261 Identities=19% Similarity=0.206 Sum_probs=193.5
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+|+.||||-||+-|+.|++.||+.|+ .|+.+.|..+..+. .|+ .+.+.+ .....++..+.||++|
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY---~VhGi~Rrss~~n~-~ri-~L~~~~----------~~~~~~l~l~~gDLtD 66 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGY---EVHGIKRRSSSFNT-PRI-HLYEDP----------HLNDPRLHLHYGDLTD 66 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCc---EEEEEeeccccCCc-ccc-eecccc----------ccCCceeEEEeccccc
Confidence 68999999999999999999999998 89999998654332 222 222211 2233569999999999
Q ss_pred CCCCCCHHHHHHHhc--CccEEEEcCccCC----CcccHHHHHHHHHHHHHHHHHHHHhccC-CceEEEEecC--ccccC
Q psy7538 110 LKLGISEIDKKELID--NVDIVYHVAATIR----FDEPIKTAVILNTRGTRDMLELSKQMKN-LKCFTYISTA--YCHPS 180 (543)
Q Consensus 110 ~~lgls~~~~~~l~~--~vd~ViH~AA~v~----~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-l~~~V~vST~--y~~~~ 180 (543)
.. .+.++++ ++|-|+|+||... |+++ ....+++-.||.+||++.+..+. -.+|...||+ |+...
T Consensus 67 ~~------~l~r~l~~v~PdEIYNLaAQS~V~vSFe~P-~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~ 139 (345)
T COG1089 67 SS------NLLRILEEVQPDEIYNLAAQSHVGVSFEQP-EYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQ 139 (345)
T ss_pred hH------HHHHHHHhcCchhheeccccccccccccCc-ceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcc
Confidence 86 6777776 5799999999764 4443 45678899999999999999742 3689999998 66555
Q ss_pred CCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCC
Q psy7538 181 EKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYK 259 (543)
Q Consensus 181 ~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~ 259 (543)
..+.+|+ .|+.|+ ++|+.+|.-|-.+...|.+ +|+-.|.=...+ .+
T Consensus 140 ~~pq~E~---TPFyPr--------------------------SPYAvAKlYa~W~tvNYResYgl~AcnGILFN----HE 186 (345)
T COG1089 140 EIPQKET---TPFYPR--------------------------SPYAVAKLYAYWITVNYRESYGLFACNGILFN----HE 186 (345)
T ss_pred cCccccC---CCCCCC--------------------------CHHHHHHHHHHheeeehHhhcCceeecceeec----CC
Confidence 5566775 344444 8999999999999999988 777666544443 44
Q ss_pred CCCCCCCCCCCchHHHHHHHhcCcee-EEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccH
Q psy7538 260 EPLPGWTDNINGPTGLLIGAGKGVIR-SMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITW 338 (543)
Q Consensus 260 ~p~~gw~d~~~g~~~~~~~~~~g~~~-~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~ 338 (543)
.|..|-.---...+..+..+..|... ...|+-+..+||-|+.|-|+++...+.+.. ++.|+++++ ...|.
T Consensus 187 SP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mwlmLQq~~-------PddyViATg--~t~sV 257 (345)
T COG1089 187 SPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMWLMLQQEE-------PDDYVIATG--ETHSV 257 (345)
T ss_pred CCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHHHHHHccCC-------CCceEEecC--ceeeH
Confidence 44444211111223345556667654 346899999999999999999998887654 568999999 88999
Q ss_pred HHHHHHHhhhhcCccC
Q psy7538 339 QEICDIGKDIVTSKIP 354 (543)
Q Consensus 339 ~e~~~~i~~~~G~~~p 354 (543)
+|++++..+..|.+..
T Consensus 258 refv~~Af~~~g~~l~ 273 (345)
T COG1089 258 REFVELAFEMVGIDLE 273 (345)
T ss_pred HHHHHHHHHHcCceEE
Confidence 9999999999875544
|
|
| >cd09071 FAR_C C-terminal domain of fatty acyl CoA reductases | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.5e-21 Score=161.72 Aligned_cols=91 Identities=31% Similarity=0.663 Sum_probs=88.6
Q ss_pred HhhhHHHHHHHHHHHhCCCchhhHHHHHHHHhhccccccccCeEEEeCccHHHHhhhCCccccccccccCCCCCHHHHHH
Q psy7538 380 FHWIPAYFLDAVILISGNKPCLVRIQERIHRGFDVFEYYANNEWEFKNGNLHQTRPKRNAREIVQYCVENDNVDIVKYFE 459 (543)
Q Consensus 380 ~~~~p~~~~d~~~~~~G~kP~~~~~~~~l~~~~~~~~~f~~~~w~f~~~n~~~l~~~l~~~d~~~F~~d~~~i~w~~Y~~ 459 (543)
.|.+|+.++|.+..+.|.+|++.++++++.+..++++||+.++|.|+++|+++|++.|+++||++|+||+++|||++|++
T Consensus 2 ~~~lpa~~~d~~~~l~g~~~~~~~~~~k~~~~~~~~~~Ft~~~w~F~~~n~~~L~~~l~~~Dr~~F~fD~~~idW~~Y~~ 81 (92)
T cd09071 2 LHLLPAYLLDLLLRLLGRKPRLLKLYRKIHKLLDLLEYFTTNEWRFDNDNTRALWERLSEEDRELFNFDIRSIDWDDYFE 81 (92)
T ss_pred cccchHHHHHHHHHHhCCChHHHHHHHHHHHHHHHhhccccCeEEeeCcHHHHHHHHCCHHHHHhCCCCCCCCCHHHHHH
Confidence 47799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhc
Q psy7538 460 KAVYGARYFLM 470 (543)
Q Consensus 460 ~~~~G~r~y~~ 470 (543)
+|+.|+|+|++
T Consensus 82 ~~~~G~r~yll 92 (92)
T cd09071 82 NYIPGLRKYLL 92 (92)
T ss_pred HHHHHHHHHhC
Confidence 99999999985
|
C-terminal domain of fatty acyl CoA reductases, a family of SDR-like proteins. SDRs or short-chain dehydrogenases/reductases are Rossmann-fold NAD(P)H-binding proteins. Many proteins in this FAR_C family may function as fatty acyl-CoA reductases (FARs), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as the biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. The function of this C-terminal domain is unclear. |
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.5e-19 Score=180.78 Aligned_cols=234 Identities=17% Similarity=0.185 Sum_probs=159.1
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
.|+|||||||||||++++++|++.|+ +|.++.|+. ++++++ +. ....++.++.+|+++
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~---~v~~~~r~~------~~~~~~---------~~----~~~~~~~~~~~D~~~ 59 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGD---RVAATVRRP------DALDDL---------KA----RYGDRLWVLQLDVTD 59 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHH---------HH----hccCceEEEEccCCC
Confidence 37899999999999999999999986 788888864 223222 11 112468899999998
Q ss_pred CCCCCCHHHHHHHh-------cCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHH----HhccCCceEEE
Q psy7538 110 LKLGISEIDKKELI-------DNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELS----KQMKNLKCFTY 171 (543)
Q Consensus 110 ~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~l~~~V~ 171 (543)
++ ++..++ .++|+|||+||.... .+..+..+++|+.|+.++++++ ++. +.+++|+
T Consensus 60 ~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~ 132 (276)
T PRK06482 60 SA------AVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQ-GGGRIVQ 132 (276)
T ss_pred HH------HHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEE
Confidence 76 455444 358999999997543 1335567889999999999997 443 5689999
Q ss_pred EecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEE
Q psy7538 172 ISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCM 247 (543)
Q Consensus 172 vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~ 247 (543)
+||..+.... ++ .+.|+.||+..|.+++.+.. ++++++
T Consensus 133 ~sS~~~~~~~---------~~-----------------------------~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~ 174 (276)
T PRK06482 133 VSSEGGQIAY---------PG-----------------------------FSLYHATKWGIEGFVEAVAQEVAPFGIEFT 174 (276)
T ss_pred EcCcccccCC---------CC-----------------------------CchhHHHHHHHHHHHHHHHHHhhccCcEEE
Confidence 9997442110 01 17899999999999887654 489999
Q ss_pred EEecCee---eecCCCCCCCCCCCCC-chHHHH-HHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCC
Q psy7538 248 ILRPSIV---VPIYKEPLPGWTDNIN-GPTGLL-IGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322 (543)
Q Consensus 248 IlRps~V---~G~~~~p~~gw~d~~~-g~~~~~-~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~ 322 (543)
++||+.+ +|+.... ++...... .+...+ .....+.. .-+.+++|++++++.++.....
T Consensus 175 ~v~pg~~~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~d~~~~~~a~~~~~~~~~~------ 237 (276)
T PRK06482 175 IVEPGPARTNFGAGLDR-GAPLDAYDDTPVGDLRRALADGSF----------AIPGDPQKMVQAMIASADQTPA------ 237 (276)
T ss_pred EEeCCccccCCcccccc-cCCCccccchhhHHHHHHHhhccC----------CCCCCHHHHHHHHHHHHcCCCC------
Confidence 9999988 4432211 01111000 111111 11111111 1135789999999999865433
Q ss_pred CcEEEeecCCCCcccHHHHHHHHhhhh
Q psy7538 323 KSVCNLTSNKDYKITWQEICDIGKDIV 349 (543)
Q Consensus 323 ~~vyni~s~~~~~~t~~e~~~~i~~~~ 349 (543)
+..||++++ +..+..++++.+.+..
T Consensus 238 ~~~~~~g~~--~~~~~~~~~~~~~~~~ 262 (276)
T PRK06482 238 PRRLTLGSD--AYASIRAALSERLAAL 262 (276)
T ss_pred CeEEecChH--HHHHHHHHHHHHHHHH
Confidence 567999998 7788888877766665
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.4e-20 Score=172.98 Aligned_cols=182 Identities=20% Similarity=0.274 Sum_probs=141.1
Q ss_pred EEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCCCC
Q psy7538 33 IFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQLKL 112 (543)
Q Consensus 33 VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~~l 112 (543)
|+|+||||++|+.++++|+++|+ +|++++|++.+. +. ..+++++.+|+.+++
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~---~V~~~~R~~~~~-----------------------~~-~~~~~~~~~d~~d~~- 52 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH---EVTALVRSPSKA-----------------------ED-SPGVEIIQGDLFDPD- 52 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS---EEEEEESSGGGH-----------------------HH-CTTEEEEESCTTCHH-
T ss_pred eEEECCCChHHHHHHHHHHHCCC---EEEEEecCchhc-----------------------cc-ccccccceeeehhhh-
Confidence 79999999999999999999985 899999986421 11 468999999999875
Q ss_pred CCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCcccccccCCC
Q psy7538 113 GISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPP 192 (543)
Q Consensus 113 gls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i~E~~y~~p 192 (543)
++...++++|+|||+++.... +...+++++++|++. +++++|++||+.++......... ..
T Consensus 53 -----~~~~al~~~d~vi~~~~~~~~----------~~~~~~~~~~a~~~~-~~~~~v~~s~~~~~~~~~~~~~~-~~-- 113 (183)
T PF13460_consen 53 -----SVKAALKGADAVIHAAGPPPK----------DVDAAKNIIEAAKKA-GVKRVVYLSSAGVYRDPPGLFSD-ED-- 113 (183)
T ss_dssp -----HHHHHHTTSSEEEECCHSTTT----------HHHHHHHHHHHHHHT-TSSEEEEEEETTGTTTCTSEEEG-GT--
T ss_pred -----hhhhhhhhcchhhhhhhhhcc----------ccccccccccccccc-ccccceeeeccccCCCCCccccc-cc--
Confidence 899999999999999976443 177889999999998 89999999999876643321000 00
Q ss_pred CChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCCCCCCCCCch
Q psy7538 193 DDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPGWTDNINGP 272 (543)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~ 272 (543)
.+.+..|...|..+|+.+.+. +++++++||+.++|....+
T Consensus 114 --------------------------~~~~~~~~~~~~~~e~~~~~~---~~~~~ivrp~~~~~~~~~~----------- 153 (183)
T PF13460_consen 114 --------------------------KPIFPEYARDKREAEEALRES---GLNWTIVRPGWIYGNPSRS----------- 153 (183)
T ss_dssp --------------------------CGGGHHHHHHHHHHHHHHHHS---TSEEEEEEESEEEBTTSSS-----------
T ss_pred --------------------------ccchhhhHHHHHHHHHHHHhc---CCCEEEEECcEeEeCCCcc-----------
Confidence 001157889999999998654 8999999999999985321
Q ss_pred HHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhh
Q psy7538 273 TGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTW 312 (543)
Q Consensus 273 ~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~ 312 (543)
...+...+....++|+++|+|.+++.++.
T Consensus 154 -----------~~~~~~~~~~~~~~i~~~DvA~~~~~~l~ 182 (183)
T PF13460_consen 154 -----------YRLIKEGGPQGVNFISREDVAKAIVEALE 182 (183)
T ss_dssp -----------EEEESSTSTTSHCEEEHHHHHHHHHHHHH
T ss_pred -----------eeEEeccCCCCcCcCCHHHHHHHHHHHhC
Confidence 11111245666799999999999998875
|
... |
| >KOG2865|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.5e-20 Score=173.74 Aligned_cols=238 Identities=13% Similarity=0.165 Sum_probs=180.4
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++|-.+-|.|||||+|+.++.+|.+.|. +|.+--|..+..-.+-++ -.....+-+..-|+
T Consensus 59 ~sGiVaTVFGAtGFlGryvvnklak~GS---QviiPyR~d~~~~r~lkv-----------------mGdLGQvl~~~fd~ 118 (391)
T KOG2865|consen 59 VSGIVATVFGATGFLGRYVVNKLAKMGS---QVIIPYRGDEYDPRHLKV-----------------MGDLGQVLFMKFDL 118 (391)
T ss_pred ccceEEEEecccccccHHHHHHHhhcCC---eEEEeccCCccchhheee-----------------cccccceeeeccCC
Confidence 4566777889999999999999999996 788888876432111110 22345778888999
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCccccc
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEER 187 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i~E~ 187 (543)
.|++ +++.+.+..++|||+.|.- +...--.+.++|+.+.+++...|+++ ++.+|||+|+..++-.
T Consensus 119 ~Ded------SIr~vvk~sNVVINLIGrd-~eTknf~f~Dvn~~~aerlAricke~-GVerfIhvS~Lganv~------- 183 (391)
T KOG2865|consen 119 RDED------SIRAVVKHSNVVINLIGRD-YETKNFSFEDVNVHIAERLARICKEA-GVERFIHVSCLGANVK------- 183 (391)
T ss_pred CCHH------HHHHHHHhCcEEEEeeccc-cccCCcccccccchHHHHHHHHHHhh-Chhheeehhhcccccc-------
Confidence 9886 8999999999999998852 11111246789999999999999999 9999999999865421
Q ss_pred ccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCCCCCC
Q psy7538 188 TYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPGWTD 267 (543)
Q Consensus 188 ~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~gw~d 267 (543)
.|+-|-.+|+++|..+++..- ..+|+||+.|||+.+.
T Consensus 184 ---------------------------------s~Sr~LrsK~~gE~aVrdafP---eAtIirPa~iyG~eDr------- 220 (391)
T KOG2865|consen 184 ---------------------------------SPSRMLRSKAAGEEAVRDAFP---EATIIRPADIYGTEDR------- 220 (391)
T ss_pred ---------------------------------ChHHHHHhhhhhHHHHHhhCC---cceeechhhhcccchh-------
Confidence 126789999999999998744 6899999999998652
Q ss_pred CCCchHHHHHHHhcCceeEEeecC-CcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHHHHHh
Q psy7538 268 NINGPTGLLIGAGKGVIRSMYCKN-TGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEICDIGK 346 (543)
Q Consensus 268 ~~~g~~~~~~~~~~g~~~~~~~~~-~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~~~i~ 346 (543)
+..+...+..- -|.+ ++++.| ......|+|-|||.+++.|+.++.. .|++|.++++ ......|+++++.
T Consensus 221 -fln~ya~~~rk-~~~~-pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s-----~Gktye~vGP--~~yql~eLvd~my 290 (391)
T KOG2865|consen 221 -FLNYYASFWRK-FGFL-PLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDS-----MGKTYEFVGP--DRYQLSELVDIMY 290 (391)
T ss_pred -HHHHHHHHHHh-cCce-eeecCCcceeeccEEEehHHHHHHHhccCccc-----cCceeeecCC--chhhHHHHHHHHH
Confidence 22221111111 2333 334444 5677889999999999999998865 5899999999 8899999999999
Q ss_pred hhhcCccC
Q psy7538 347 DIVTSKIP 354 (543)
Q Consensus 347 ~~~G~~~p 354 (543)
+.. .+.|
T Consensus 291 ~~~-~~~~ 297 (391)
T KOG2865|consen 291 DMA-REWP 297 (391)
T ss_pred HHH-hhcc
Confidence 888 6544
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.2e-19 Score=177.21 Aligned_cols=236 Identities=17% Similarity=0.180 Sum_probs=159.3
Q ss_pred hhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEE
Q psy7538 25 AKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVIS 104 (543)
Q Consensus 25 ~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~ 104 (543)
.+--++|+|+||||||++|+.+++.|++.|+ +|+++.|..+. ....+ + ...+++++.
T Consensus 12 ~~~~~~~~ilItGasG~iG~~l~~~L~~~g~---~V~~~~R~~~~------~~~~~-------------~-~~~~~~~~~ 68 (251)
T PLN00141 12 AENVKTKTVFVAGATGRTGKRIVEQLLAKGF---AVKAGVRDVDK------AKTSL-------------P-QDPSLQIVR 68 (251)
T ss_pred cccccCCeEEEECCCcHHHHHHHHHHHhCCC---EEEEEecCHHH------HHHhc-------------c-cCCceEEEE
Confidence 3445679999999999999999999999987 78889987532 11110 1 123688999
Q ss_pred ccCCCCCCCCCHHHHHHHh-cCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCc
Q psy7538 105 GDITQLKLGISEIDKKELI-DNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKV 183 (543)
Q Consensus 105 gDl~~~~lgls~~~~~~l~-~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~ 183 (543)
+|+++.. +++...+ .++|+|||+++......+ ...+++|+.|+.++++++++. ++++||++||..+++....
T Consensus 69 ~Dl~d~~-----~~l~~~~~~~~d~vi~~~g~~~~~~~-~~~~~~n~~~~~~ll~a~~~~-~~~~iV~iSS~~v~g~~~~ 141 (251)
T PLN00141 69 ADVTEGS-----DKLVEAIGDDSDAVICATGFRRSFDP-FAPWKVDNFGTVNLVEACRKA-GVTRFILVSSILVNGAAMG 141 (251)
T ss_pred eeCCCCH-----HHHHHHhhcCCCEEEECCCCCcCCCC-CCceeeehHHHHHHHHHHHHc-CCCEEEEEccccccCCCcc
Confidence 9999742 2566666 689999999886432111 223578999999999999987 7899999999976553211
Q ss_pred -ccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCC
Q psy7538 184 -LEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPL 262 (543)
Q Consensus 184 -i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~ 262 (543)
.....|. +. .+ ...|..+|..+|+++++. +++++++||+.+++...
T Consensus 142 ~~~~~~~~----~~-----------------~~------~~~~~~~k~~~e~~l~~~---gi~~~iirpg~~~~~~~--- 188 (251)
T PLN00141 142 QILNPAYI----FL-----------------NL------FGLTLVAKLQAEKYIRKS---GINYTIVRPGGLTNDPP--- 188 (251)
T ss_pred cccCcchh----HH-----------------HH------HHHHHHHHHHHHHHHHhc---CCcEEEEECCCccCCCC---
Confidence 0000000 00 00 023456788899887754 89999999998886521
Q ss_pred CCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCc-ccHHHH
Q psy7538 263 PGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYK-ITWQEI 341 (543)
Q Consensus 263 ~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~-~t~~e~ 341 (543)
. |... +.........+|+.+|+|+++..++..+.. ...++.+.+...++ .+++++
T Consensus 189 -------~-----------~~~~-~~~~~~~~~~~i~~~dvA~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 244 (251)
T PLN00141 189 -------T-----------GNIV-MEPEDTLYEGSISRDQVAEVAVEALLCPES-----SYKVVEIVARADAPKRSYKDL 244 (251)
T ss_pred -------C-----------ceEE-ECCCCccccCcccHHHHHHHHHHHhcChhh-----cCcEEEEecCCCCCchhHHHH
Confidence 0 1111 111111223579999999999999876554 35678888754454 799999
Q ss_pred HHHHhh
Q psy7538 342 CDIGKD 347 (543)
Q Consensus 342 ~~~i~~ 347 (543)
+..+++
T Consensus 245 ~~~~~~ 250 (251)
T PLN00141 245 FASIKQ 250 (251)
T ss_pred HHHhhc
Confidence 887764
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.1e-18 Score=172.72 Aligned_cols=229 Identities=14% Similarity=0.146 Sum_probs=153.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|++|||||||+||++++++|++.|+ +|.++.|+... .+++.+ .++ ....++.++.+|+
T Consensus 5 ~~~~~vlItGasg~iG~~la~~l~~~G~---~v~~~~r~~~~---~~~~~~--------~~~-----~~~~~~~~~~~Dl 65 (262)
T PRK13394 5 LNGKTAVVTGAASGIGKEIALELARAGA---AVAIADLNQDG---ANAVAD--------EIN-----KAGGKAIGVAMDV 65 (262)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---eEEEEeCChHH---HHHHHH--------HHH-----hcCceEEEEECCC
Confidence 4689999999999999999999999987 67888887532 111211 111 1124678899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHH----HHHHHHHH-HhccCCce
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRG----TRDMLELS-KQMKNLKC 168 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~g----t~~ll~~a-~~~~~l~~ 168 (543)
++++ .++.+++ .+|+|||+|+.... .+.++..+++|+.| +.++++++ ++. +.++
T Consensus 66 ~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~~~~ 138 (262)
T PRK13394 66 TNED------AVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDD-RGGV 138 (262)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhc-CCcE
Confidence 9876 4554443 48999999997532 13345678899999 77777777 554 6789
Q ss_pred EEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCC
Q psy7538 169 FTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGM 244 (543)
Q Consensus 169 ~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~l 244 (543)
+|++||.++..... ..+.|+.+|+..+.+++.++. .++
T Consensus 139 iv~~ss~~~~~~~~--------------------------------------~~~~y~~sk~a~~~~~~~la~~~~~~~i 180 (262)
T PRK13394 139 VIYMGSVHSHEASP--------------------------------------LKSAYVTAKHGLLGLARVLAKEGAKHNV 180 (262)
T ss_pred EEEEcchhhcCCCC--------------------------------------CCcccHHHHHHHHHHHHHHHHHhhhcCe
Confidence 99999975532110 016899999999988877654 479
Q ss_pred cEEEEecCeeeecCCCC-CCCCCCCCC-chHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCC
Q psy7538 245 PCMILRPSIVVPIYKEP-LPGWTDNIN-GPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322 (543)
Q Consensus 245 p~~IlRps~V~G~~~~p-~~gw~d~~~-g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~ 322 (543)
+++++||+.++++.... .+....... .....+.. ++..+....++++++|++++++.++..... . ..
T Consensus 181 ~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~dva~a~~~l~~~~~~-~--~~ 249 (262)
T PRK13394 181 RSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKK--------VMLGKTVDGVFTTVEDVAQTVLFLSSFPSA-A--LT 249 (262)
T ss_pred EEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHH--------HHhcCCCCCCCCCHHHHHHHHHHHcCcccc-C--Cc
Confidence 99999999998874311 110000000 00011111 122344567899999999999988865432 1 24
Q ss_pred CcEEEeecC
Q psy7538 323 KSVCNLTSN 331 (543)
Q Consensus 323 ~~vyni~s~ 331 (543)
+..|+++++
T Consensus 250 g~~~~~~~g 258 (262)
T PRK13394 250 GQSFVVSHG 258 (262)
T ss_pred CCEEeeCCc
Confidence 778988876
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2e-18 Score=169.50 Aligned_cols=225 Identities=10% Similarity=0.049 Sum_probs=147.4
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
++++|+||||+||||++++++|++.|+ +|+++.|+... ..+.+.+ .+.. .....+.++.+|++
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~---~v~~~~r~~~~--~~~~~~~--------~~~~----~~~~~~~~~~~Dl~ 67 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGY---RVAIHYHRSAA--EADALAA--------ELNA----LRPGSAAALQADLL 67 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEcCCCHH--HHHHHHH--------HHHh----hcCCceEEEEcCCC
Confidence 568999999999999999999999986 78888886421 1111111 1111 11235788999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc--cCCceEEEE
Q psy7538 109 QLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM--KNLKCFTYI 172 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~l~~~V~v 172 (543)
+.+ ++..+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... +.-..++++
T Consensus 68 ~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~ 141 (249)
T PRK09135 68 DPD------ALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNI 141 (249)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEE
Confidence 875 5555554 57999999996421 2345668999999999999999642 112356666
Q ss_pred ecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh---cCCcEEEE
Q psy7538 173 STAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME---LGMPCMIL 249 (543)
Q Consensus 173 ST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~---~~lp~~Il 249 (543)
|+..... ..+|. +.|+.||+.+|.+++.+.. .+++++++
T Consensus 142 ~~~~~~~---------~~~~~-----------------------------~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v 183 (249)
T PRK09135 142 TDIHAER---------PLKGY-----------------------------PVYCAAKAALEMLTRSLALELAPEVRVNAV 183 (249)
T ss_pred eChhhcC---------CCCCc-----------------------------hhHHHHHHHHHHHHHHHHHHHCCCCeEEEE
Confidence 5533211 11111 7899999999999988765 36999999
Q ss_pred ecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEee
Q psy7538 250 RPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLT 329 (543)
Q Consensus 250 Rps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~ 329 (543)
||+.++|+...+ .+ +.........+.. ..-+.+++|+|+++..++..... ..+++||++
T Consensus 184 ~pg~~~~~~~~~------~~--~~~~~~~~~~~~~---------~~~~~~~~d~a~~~~~~~~~~~~----~~g~~~~i~ 242 (249)
T PRK09135 184 APGAILWPEDGN------SF--DEEARQAILARTP---------LKRIGTPEDIAEAVRFLLADASF----ITGQILAVD 242 (249)
T ss_pred EeccccCccccc------cC--CHHHHHHHHhcCC---------cCCCcCHHHHHHHHHHHcCcccc----ccCcEEEEC
Confidence 999999987532 11 1111112222211 11123589999999666543221 258899999
Q ss_pred cCCCCccc
Q psy7538 330 SNKDYKIT 337 (543)
Q Consensus 330 s~~~~~~t 337 (543)
++ ..++
T Consensus 243 ~g--~~~~ 248 (249)
T PRK09135 243 GG--RSLT 248 (249)
T ss_pred CC--eecc
Confidence 88 5443
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=7e-18 Score=179.63 Aligned_cols=246 Identities=11% Similarity=0.103 Sum_probs=160.8
Q ss_pred hhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 26 KTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 26 ~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
+-+.|++||||||+|+||++++++|++.|+ +|++++|.... .+++.+.+.. ..+.... .....++.++.|
T Consensus 76 ~~~~gKvVLVTGATGgIG~aLAr~LLk~G~---~Vval~Rn~ek---l~~l~~~l~~---~~L~~~G-a~~~~~v~iV~g 145 (576)
T PLN03209 76 DTKDEDLAFVAGATGKVGSRTVRELLKLGF---RVRAGVRSAQR---AESLVQSVKQ---MKLDVEG-TQPVEKLEIVEC 145 (576)
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCC---eEEEEeCCHHH---HHHHHHHhhh---hcccccc-ccccCceEEEEe
Confidence 456789999999999999999999999987 78889997532 1122111000 0000000 111246889999
Q ss_pred cCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCc-ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCcc
Q psy7538 106 DITQLKLGISEIDKKELIDNVDIVYHVAATIRFD-EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVL 184 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i 184 (543)
|+++.+ ++..++.++|+|||+||..... ..+...+++|+.|+.+++++|++. ++++||++||..+.... .
T Consensus 146 DLtD~e------sI~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~a-gVgRIV~VSSiga~~~g--~ 216 (576)
T PLN03209 146 DLEKPD------QIGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVA-KVNHFILVTSLGTNKVG--F 216 (576)
T ss_pred cCCCHH------HHHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHh-CCCEEEEEccchhcccC--c
Confidence 999865 7888889999999999875421 234567889999999999999997 88999999998653111 0
Q ss_pred cccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCCC
Q psy7538 185 EERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPG 264 (543)
Q Consensus 185 ~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~g 264 (543)
.+..+ . .. ..|...|..+|+.+... |++++++||+.+.++..+.
T Consensus 217 p~~~~----~--------------------sk------~~~~~~KraaE~~L~~s---GIrvTIVRPG~L~tp~d~~--- 260 (576)
T PLN03209 217 PAAIL----N--------------------LF------WGVLCWKRKAEEALIAS---GLPYTIVRPGGMERPTDAY--- 260 (576)
T ss_pred cccch----h--------------------hH------HHHHHHHHHHHHHHHHc---CCCEEEEECCeecCCcccc---
Confidence 00000 0 00 46778888999888765 8999999999987653321
Q ss_pred CCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCc-ccHHHHHH
Q psy7538 265 WTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYK-ITWQEICD 343 (543)
Q Consensus 265 w~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~-~t~~e~~~ 343 (543)
. ..+....... .....-.+..+|||++++.++.+... ..+.+|.+.++...+ ..+.+.+.
T Consensus 261 -----~---------~t~~v~~~~~-d~~~gr~isreDVA~vVvfLasd~~a----s~~kvvevi~~~~~p~~~~~~~~~ 321 (576)
T PLN03209 261 -----K---------ETHNLTLSEE-DTLFGGQVSNLQVAELMACMAKNRRL----SYCKVVEVIAETTAPLTPMEELLA 321 (576)
T ss_pred -----c---------cccceeeccc-cccCCCccCHHHHHHHHHHHHcCchh----ccceEEEEEeCCCCCCCCHHHHHH
Confidence 0 0011111111 11112347889999999998876543 147899998873222 34444444
Q ss_pred HH
Q psy7538 344 IG 345 (543)
Q Consensus 344 ~i 345 (543)
.+
T Consensus 322 ~i 323 (576)
T PLN03209 322 KI 323 (576)
T ss_pred hc
Confidence 33
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.80 E-value=7.3e-18 Score=165.62 Aligned_cols=222 Identities=11% Similarity=0.070 Sum_probs=153.7
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||+|++|++++++|+++|+ +|+++.|+... ..+.. +.+.. ...++.++.+|+
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~g~---~V~~~~r~~~~--~~~~~---------~~l~~-----~~~~~~~~~~Dl 64 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAADGA---EVIVVDICGDD--AAATA---------ELVEA-----AGGKARARQVDV 64 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCC---EEEEEeCCHHH--HHHHH---------HHHHh-----cCCeEEEEECCC
Confidence 4678999999999999999999999987 78999997421 11111 11111 123588999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHh---ccCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQ---MKNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~---~~~l~~~V 170 (543)
++++ +++.+++ .+|+|||+|+.... .+.+...+++|+.++.++++.+.. ..+.++||
T Consensus 65 ~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii 138 (251)
T PRK12826 65 RDRA------ALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIV 138 (251)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEE
Confidence 9875 5666554 68999999987653 134566899999999999998842 12567999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+.... .+ ....|+.+|+.+|.++..... .++++
T Consensus 139 ~~ss~~~~~~~---------~~----------------------------~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~ 181 (251)
T PRK12826 139 LTSSVAGPRVG---------YP----------------------------GLAHYAASKAGLVGFTRALALELAARNITV 181 (251)
T ss_pred EEechHhhccC---------CC----------------------------CccHHHHHHHHHHHHHHHHHHHHHHcCeEE
Confidence 99998654100 00 015899999999999887654 48999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
+++||+.++|+...+.. +..+...+..+. ....+++++|+|+++..++..... ...+++|
T Consensus 182 ~~i~pg~~~~~~~~~~~--------~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~~~---~~~g~~~ 241 (251)
T PRK12826 182 NSVHPGGVDTPMAGNLG--------DAQWAEAIAAAI---------PLGRLGEPEDIAAAVLFLASDEAR---YITGQTL 241 (251)
T ss_pred EEEeeCCCCcchhhhcC--------chHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCcccc---CcCCcEE
Confidence 99999999988543211 111111111111 112578999999999887754332 1257899
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
++.++
T Consensus 242 ~~~~g 246 (251)
T PRK12826 242 PVDGG 246 (251)
T ss_pred EECCC
Confidence 99876
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=9.3e-18 Score=167.80 Aligned_cols=238 Identities=13% Similarity=0.077 Sum_probs=158.1
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
.+|+|+||||||+||++++++|+++|+ +|+++.|+.. .++++. .....++..+.+|++
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~---~V~~~~r~~~------~~~~~~-------------~~~~~~~~~~~~D~~ 59 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGD---RVVATARDTA------TLADLA-------------EKYGDRLLPLALDVT 59 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEECCHH------HHHHHH-------------HhccCCeeEEEccCC
Confidence 468999999999999999999999986 7889998742 122111 111235778899999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHH----HhccCCceEE
Q psy7538 109 QLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELS----KQMKNLKCFT 170 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~l~~~V 170 (543)
+++ ++..+++ ++|+|||+||.... .+.++..+++|+.++..+++.+ ++. +.+++|
T Consensus 60 ~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv 132 (275)
T PRK08263 60 DRA------AVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQ-RSGHII 132 (275)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEE
Confidence 875 4544433 57999999997643 2456778999999998888776 343 567999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+...... .+.|+.+|+..|.+....+. .|+++
T Consensus 133 ~vsS~~~~~~~~~--------------------------------------~~~Y~~sKaa~~~~~~~la~e~~~~gi~v 174 (275)
T PRK08263 133 QISSIGGISAFPM--------------------------------------SGIYHASKWALEGMSEALAQEVAEFGIKV 174 (275)
T ss_pred EEcChhhcCCCCC--------------------------------------ccHHHHHHHHHHHHHHHHHHHhhhhCcEE
Confidence 9999865432110 16899999999988876543 58999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCccccc-chHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADF-LPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~-V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
.++||+.+..+...+.....+.......+...... ......+ +.++|++++++.++..... .++
T Consensus 175 ~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~p~dva~~~~~l~~~~~~-----~~~- 239 (275)
T PRK08263 175 TLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAE---------QWSERSVDGDPEAAAEALLKLVDAENP-----PLR- 239 (275)
T ss_pred EEEecCCccCCccccccccCCCchhhhhHHHHHHH---------HHHhccCCCCHHHHHHHHHHHHcCCCC-----CeE-
Confidence 99999988665432111100000000011111111 1112234 7899999999999887654 234
Q ss_pred EEeecCCCCcccHHHHHHHHhhhh
Q psy7538 326 CNLTSNKDYKITWQEICDIGKDIV 349 (543)
Q Consensus 326 yni~s~~~~~~t~~e~~~~i~~~~ 349 (543)
|.++++. .++++.++.+.+.+.-
T Consensus 240 ~~~~~~~-~~~~~~~~~~~~~~~~ 262 (275)
T PRK08263 240 LFLGSGV-LDLAKADYERRLATWE 262 (275)
T ss_pred EEeCchH-HHHHHHHHHHHHHHHH
Confidence 4444431 5788899888887753
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.9e-18 Score=167.07 Aligned_cols=229 Identities=13% Similarity=0.078 Sum_probs=149.9
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++++|+||||||++|++++++|++.|+ +|+++.|.... .+++.+ .+ .....++..+.+|+
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~---~v~~~~r~~~~---~~~~~~--------~~-----~~~~~~~~~~~~Dl 62 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGA---KVVIADLNDEA---AAAAAE--------AL-----QKAGGKAIGVAMDV 62 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---eEEEEeCCHHH---HHHHHH--------HH-----HhcCCcEEEEEcCC
Confidence 3678999999999999999999999987 78889887532 122211 11 11224688899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCCc-------ccHHHHHHHHHHHHHHHHH----HHHhccCCceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRFD-------EPIKTAVILNTRGTRDMLE----LSKQMKNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~Nv~gt~~ll~----~a~~~~~l~~~ 169 (543)
++++ ++..+++ .+|+|||+|+..... +.+...+++|+.|+.++++ .+++. +.++|
T Consensus 63 ~~~~------~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~i 135 (258)
T PRK12429 63 TDEE------AINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQ-GGGRI 135 (258)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc-CCeEE
Confidence 9876 5555544 589999999865431 2345578899999555544 44444 67899
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+...... .+.|+.+|+..+.+.+.+.. .++.
T Consensus 136 v~iss~~~~~~~~~--------------------------------------~~~y~~~k~a~~~~~~~l~~~~~~~~i~ 177 (258)
T PRK12429 136 INMASVHGLVGSAG--------------------------------------KAAYVSAKHGLIGLTKVVALEGATHGVT 177 (258)
T ss_pred EEEcchhhccCCCC--------------------------------------cchhHHHHHHHHHHHHHHHHHhcccCeE
Confidence 99999855432110 16899999988888776544 4799
Q ss_pred EEEEecCeeeecCCCCC-CCCCCCCC-chHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCC
Q psy7538 246 CMILRPSIVVPIYKEPL-PGWTDNIN-GPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERK 323 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~-~gw~d~~~-g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~ 323 (543)
+.++||+.+.++...+. +.-..... ........ .+.......++++++|+|+++..++..... ...+
T Consensus 178 v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~---~~~g 246 (258)
T PRK12429 178 VNAICPGYVDTPLVRKQIPDLAKERGISEEEVLED--------VLLPLVPQKRFTTVEEIADYALFLASFAAK---GVTG 246 (258)
T ss_pred EEEEecCCCcchhhhhhhhhhccccCCChHHHHHH--------HHhccCCccccCCHHHHHHHHHHHcCcccc---CccC
Confidence 99999999988653210 00000000 00001100 111223346799999999999888865432 1247
Q ss_pred cEEEeecC
Q psy7538 324 SVCNLTSN 331 (543)
Q Consensus 324 ~vyni~s~ 331 (543)
+.|++.++
T Consensus 247 ~~~~~~~g 254 (258)
T PRK12429 247 QAWVVDGG 254 (258)
T ss_pred CeEEeCCC
Confidence 88988865
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.79 E-value=7.6e-18 Score=166.00 Aligned_cols=222 Identities=13% Similarity=0.147 Sum_probs=150.4
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+|+||||||||+||++++++|++.|+ +|+++.|+... .+++.+.+ . ....++.++.+|+++
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~---~v~~~~r~~~~---~~~~~~~~--------~-----~~~~~~~~~~~D~~~ 61 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGA---NVVVNDLGEAG---AEAAAKVA--------T-----DAGGSVIYLVADVTK 61 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHHH--------H-----hcCCceEEEECCCCC
Confidence 57899999999999999999999987 78999997421 22222211 1 112468899999998
Q ss_pred CCCCCCHHHHHHH-------hcCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHH----HhccCCceEEE
Q psy7538 110 LKLGISEIDKKEL-------IDNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELS----KQMKNLKCFTY 171 (543)
Q Consensus 110 ~~lgls~~~~~~l-------~~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~l~~~V~ 171 (543)
++ ++..+ +.++|+|||+|+.... .+.++..++.|+.|+..+++.+ ++. +.+++|+
T Consensus 62 ~~------~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~~v~ 134 (255)
T TIGR01963 62 ED------EIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQ-GWGRIIN 134 (255)
T ss_pred HH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEE
Confidence 75 44333 3458999999987532 1234567889999988888877 343 6789999
Q ss_pred EecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEE
Q psy7538 172 ISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCM 247 (543)
Q Consensus 172 vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~ 247 (543)
+||..+..... ..+.|+.+|...|.+++.+.. .+++++
T Consensus 135 ~ss~~~~~~~~--------------------------------------~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~ 176 (255)
T TIGR01963 135 IASAHGLVASP--------------------------------------FKSAYVAAKHGLIGLTKVLALEVAAHGITVN 176 (255)
T ss_pred EcchhhcCCCC--------------------------------------CCchhHHHHHHHHHHHHHHHHHhhhcCeEEE
Confidence 99975432211 016899999999988876544 489999
Q ss_pred EEecCeeeecCCCCCCCCCCCCCchHHHHHHHhc--Ccee-----EEeecCCcccccchHHHHHHHHHHHhhhhcccCCC
Q psy7538 248 ILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGK--GVIR-----SMYCKNTGMADFLPADVAINGVFLFTWDFLNSKES 320 (543)
Q Consensus 248 IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~--g~~~-----~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~ 320 (543)
++||+.++++.... .+..... +... .....+....++++++|+|++++.++..... .
T Consensus 177 ~i~pg~v~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~---~ 240 (255)
T TIGR01963 177 AICPGYVRTPLVEK-------------QIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETALFLASDAAA---G 240 (255)
T ss_pred EEecCccccHHHHH-------------HHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHHHHHHcCcccc---C
Confidence 99999998764210 0000000 0000 0011234567899999999999999876422 1
Q ss_pred CCCcEEEeecC
Q psy7538 321 ERKSVCNLTSN 331 (543)
Q Consensus 321 ~~~~vyni~s~ 331 (543)
..+++|+++++
T Consensus 241 ~~g~~~~~~~g 251 (255)
T TIGR01963 241 ITGQAIVLDGG 251 (255)
T ss_pred ccceEEEEcCc
Confidence 24779999876
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.5e-18 Score=171.18 Aligned_cols=229 Identities=15% Similarity=0.107 Sum_probs=150.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++++++||||||++|++++++|+++|+ +|+++.|+.... +.+.+. ++. .....++.++.+|+
T Consensus 1 ~~~k~~lItGasg~iG~~la~~l~~~G~---~V~~~~r~~~~~---~~~~~~--------~~~---~~~~~~~~~~~~D~ 63 (280)
T PRK06914 1 MNKKIAIVTGASSGFGLLTTLELAKKGY---LVIATMRNPEKQ---ENLLSQ--------ATQ---LNLQQNIKVQQLDV 63 (280)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhCCC---EEEEEeCCHHHH---HHHHHH--------HHh---cCCCCceeEEecCC
Confidence 3578999999999999999999999986 788888875321 111111 110 11124788999999
Q ss_pred CCCCCCCCHHHHHH---H---hcCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHH----HhccCCceEE
Q psy7538 108 TQLKLGISEIDKKE---L---IDNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELS----KQMKNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~---l---~~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~l~~~V 170 (543)
++++ +++. + ...+|+|||+|+.... .+.++..+++|+.|+.++++.+ ++. +..++|
T Consensus 64 ~d~~------~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv 136 (280)
T PRK06914 64 TDQN------SIHNFQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQ-KSGKII 136 (280)
T ss_pred CCHH------HHHHHHHHHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEE
Confidence 9975 4433 2 2357999999986532 1345567889999999888886 443 567999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... ..+.|+.+|+..|.+++..+. +++++
T Consensus 137 ~vsS~~~~~~~~--------------------------------------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v 178 (280)
T PRK06914 137 NISSISGRVGFP--------------------------------------GLSPYVSSKYALEGFSESLRLELKPFGIDV 178 (280)
T ss_pred EECcccccCCCC--------------------------------------CCchhHHhHHHHHHHHHHHHHHhhhhCCEE
Confidence 999975432210 016899999999998887652 58999
Q ss_pred EEEecCeeeecCCCCCCCCCCCC---Cch-HHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCC
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNI---NGP-TGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~---~g~-~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~ 322 (543)
+++||+.+.++..++.....++. ..+ ...+..... . + ......+++++|+|++++.++.+...
T Consensus 179 ~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~---~~~~~~~~~~~dva~~~~~~~~~~~~------ 245 (280)
T PRK06914 179 ALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQK-H---I---NSGSDTFGNPIDVANLIVEIAESKRP------ 245 (280)
T ss_pred EEEecCCcccchhhccccccccccccccchHHHHHHHHH-H---H---hhhhhccCCHHHHHHHHHHHHcCCCC------
Confidence 99999998877433211100000 000 011111110 0 0 11234578899999999999877654
Q ss_pred CcEEEeecC
Q psy7538 323 KSVCNLTSN 331 (543)
Q Consensus 323 ~~vyni~s~ 331 (543)
...|+++++
T Consensus 246 ~~~~~~~~~ 254 (280)
T PRK06914 246 KLRYPIGKG 254 (280)
T ss_pred CcccccCCc
Confidence 346888876
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.3e-17 Score=161.55 Aligned_cols=220 Identities=15% Similarity=0.157 Sum_probs=152.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||||++|++|+++|++.|+ +|.++.|+... ..+.+.+. + .....++.++.+|+
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~g~---~v~~~~~~~~~--~~~~~~~~--------~-----~~~~~~~~~~~~D~ 65 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARAGA---DVVVHYRSDEE--AAEELVEA--------V-----EALGRRAQAVQADV 65 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---eEEEEeCCCHH--HHHHHHHH--------H-----HhcCCceEEEECCc
Confidence 3568999999999999999999999987 56666766421 11112111 1 11234688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHH----hccCCceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSK----QMKNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~----~~~~l~~~ 169 (543)
++++ ++..+++ ++|+|||+|+.... .+.+...+++|+.++.++++.+. +. +.++|
T Consensus 66 ~~~~------~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~ 138 (249)
T PRK12825 66 TDKA------ALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQ-RGGRI 138 (249)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEE
Confidence 9875 5555543 57999999996532 23356679999999999998883 44 57899
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+..... ....|+.+|+..|.++..++. .+++
T Consensus 139 i~~SS~~~~~~~~--------------------------------------~~~~y~~sK~~~~~~~~~~~~~~~~~~i~ 180 (249)
T PRK12825 139 VNISSVAGLPGWP--------------------------------------GRSNYAAAKAGLVGLTKALARELAEYGIT 180 (249)
T ss_pred EEECccccCCCCC--------------------------------------CchHHHHHHHHHHHHHHHHHHHHhhcCeE
Confidence 9999986643211 016899999999988876544 4899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
++++||+.++++...+. . +...... .. ......+++++|+++++..++..... ...+++
T Consensus 181 ~~~i~pg~~~~~~~~~~-------~-~~~~~~~----~~------~~~~~~~~~~~dva~~~~~~~~~~~~---~~~g~~ 239 (249)
T PRK12825 181 VNMVAPGDIDTDMKEAT-------I-EEAREAK----DA------ETPLGRSGTPEDIARAVAFLCSDASD---YITGQV 239 (249)
T ss_pred EEEEEECCccCCccccc-------c-chhHHhh----hc------cCCCCCCcCHHHHHHHHHHHhCcccc---CcCCCE
Confidence 99999999999754321 1 1111110 00 11122389999999999888865422 135889
Q ss_pred EEeecC
Q psy7538 326 CNLTSN 331 (543)
Q Consensus 326 yni~s~ 331 (543)
|+++++
T Consensus 240 ~~i~~g 245 (249)
T PRK12825 240 IEVTGG 245 (249)
T ss_pred EEeCCC
Confidence 999987
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.7e-17 Score=159.78 Aligned_cols=220 Identities=15% Similarity=0.157 Sum_probs=149.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++++++||||+|+||++++++|++.|+ +|.++.|... ++.+++ .+.++ ....++.++.+|+
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~g~---~v~~~~~~~~-----~~~~~~-----~~~l~-----~~~~~~~~~~~D~ 65 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQEGA---KVVINYNSSK-----EAAENL-----VNELG-----KEGHDVYAVQADV 65 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCC---EEEEEcCCcH-----HHHHHH-----HHHHH-----hcCCeEEEEECCC
Confidence 4689999999999999999999999986 5665544321 111111 11111 1124688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ ++..+++ .+|+|||+|+.... .+.+++.+++|+.|+.++++++... .+..++|
T Consensus 66 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv 139 (247)
T PRK12935 66 SKVE------DANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRII 139 (247)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEE
Confidence 9875 5555554 37999999997542 1456678999999999999998742 1346899
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||.++..... + ...|+.||+..|.+.+.... .++++
T Consensus 140 ~~sS~~~~~~~~---------~-----------------------------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v 181 (247)
T PRK12935 140 SISSIIGQAGGF---------G-----------------------------QTNYSAAKAGMLGFTKSLALELAKTNVTV 181 (247)
T ss_pred EEcchhhcCCCC---------C-----------------------------CcchHHHHHHHHHHHHHHHHHHHHcCcEE
Confidence 999986543211 0 16899999988888766543 48999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
++++|+.|.++.... .+.........+ ....++.+++|++++++.++..... ..+++|
T Consensus 182 ~~v~pg~v~t~~~~~---------~~~~~~~~~~~~---------~~~~~~~~~edva~~~~~~~~~~~~----~~g~~~ 239 (247)
T PRK12935 182 NAICPGFIDTEMVAE---------VPEEVRQKIVAK---------IPKKRFGQADEIAKGVVYLCRDGAY----ITGQQL 239 (247)
T ss_pred EEEEeCCCcChhhhh---------ccHHHHHHHHHh---------CCCCCCcCHHHHHHHHHHHcCcccC----ccCCEE
Confidence 999999886542211 111111121111 2235689999999999988865321 247899
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
|++++
T Consensus 240 ~i~~g 244 (247)
T PRK12935 240 NINGG 244 (247)
T ss_pred EeCCC
Confidence 99876
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1e-17 Score=164.58 Aligned_cols=226 Identities=12% Similarity=0.106 Sum_probs=148.4
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++++++|||||||||++++++|++.|+ +|+++.|+... ..+.+.+ .++ ....++..+.+|+
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~G~---~V~~~~r~~~~--~~~~~~~--------~l~-----~~~~~~~~~~~D~ 65 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGAGA---HVVVNYRQKAP--RANKVVA--------EIE-----AAGGRASAVGADL 65 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHCCC---EEEEEeCCchH--hHHHHHH--------HHH-----hcCCceEEEEcCC
Confidence 4678999999999999999999999987 78888886421 1122211 111 1123578899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhc-cCCceEEEEecCccc
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQM-KNLKCFTYISTAYCH 178 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~vST~y~~ 178 (543)
++++ ++..+++ ++|+|||+|+.... ...+...+++|+.|+.++++.+.+. ..-.++|++||..+.
T Consensus 66 ~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~ 139 (248)
T PRK07806 66 TDEE------SVAALMDTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAH 139 (248)
T ss_pred CCHH------HHHHHHHHHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhh
Confidence 9876 5555543 58999999986432 2234557889999999999999864 223589999996432
Q ss_pred cCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEEEecCee
Q psy7538 179 PSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMILRPSIV 254 (543)
Q Consensus 179 ~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~IlRps~V 254 (543)
.... .+. .|. ...|+.||+.+|.+++.++. .++++++++|+.+
T Consensus 140 ~~~~--~~~---~~~----------------------------~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~ 186 (248)
T PRK07806 140 FIPT--VKT---MPE----------------------------YEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMI 186 (248)
T ss_pred cCcc--ccC---Ccc----------------------------ccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccc
Confidence 1100 000 000 16899999999999988654 5789999998866
Q ss_pred eecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecC
Q psy7538 255 VPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSN 331 (543)
Q Consensus 255 ~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~ 331 (543)
-++....+. .. ..+. ... . ......++++++|+|++++.++..... .+++|+++++
T Consensus 187 ~~~~~~~~~---~~-~~~~-~~~----~-------~~~~~~~~~~~~dva~~~~~l~~~~~~-----~g~~~~i~~~ 242 (248)
T PRK07806 187 EGTVTATLL---NR-LNPG-AIE----A-------RREAAGKLYTVSEFAAEVARAVTAPVP-----SGHIEYVGGA 242 (248)
T ss_pred cCchhhhhh---cc-CCHH-HHH----H-------HHhhhcccCCHHHHHHHHHHHhhcccc-----CccEEEecCc
Confidence 443211000 00 0000 000 0 001124789999999999999885543 5889999987
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.4e-17 Score=162.24 Aligned_cols=240 Identities=14% Similarity=0.164 Sum_probs=160.4
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|+||+++++.|++.|+ +|+++.|+... +++.. +.+.. .....++.++.+|+
T Consensus 5 ~~~k~vlItGasg~IG~~la~~l~~~G~---~V~~~~r~~~~------~~~~~-----~~l~~---~~~~~~~~~~~~Dl 67 (276)
T PRK05875 5 FQDRTYLVTGGGSGIGKGVAAGLVAAGA---AVMIVGRNPDK------LAAAA-----EEIEA---LKGAGAVRYEPADV 67 (276)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---eEEEEeCCHHH------HHHHH-----HHHHh---ccCCCceEEEEcCC
Confidence 5789999999999999999999999987 78888886421 11110 11111 01124688899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC--------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF--------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~ 169 (543)
++++ ++..+++ .+|+|||+|+.... .+.+...+++|+.|+.++++.+.+. .+-.++
T Consensus 68 ~~~~------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~i 141 (276)
T PRK05875 68 TDED------QVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSF 141 (276)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEE
Confidence 9875 5655554 68999999985421 1234567889999999999877543 133589
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+..... ..+.|+.+|+..|.+++.+.. .+++
T Consensus 142 v~~sS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~ 183 (276)
T PRK05875 142 VGISSIAASNTHR--------------------------------------WFGAYGVTKSAVDHLMKLAADELGPSWVR 183 (276)
T ss_pred EEEechhhcCCCC--------------------------------------CCcchHHHHHHHHHHHHHHHHHhcccCeE
Confidence 9999986532211 116899999999999988764 4789
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
++++||+.+.++...+. ............. .....+++++|+|+++..++..... ...+++
T Consensus 184 v~~i~Pg~v~t~~~~~~-------~~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~---~~~g~~ 244 (276)
T PRK05875 184 VNSIRPGLIRTDLVAPI-------TESPELSADYRAC---------TPLPRVGEVEDVANLAMFLLSDAAS---WITGQV 244 (276)
T ss_pred EEEEecCccCCcccccc-------ccCHHHHHHHHcC---------CCCCCCcCHHHHHHHHHHHcCchhc---CcCCCE
Confidence 99999998865432210 0001111111111 1123357799999999998876542 124789
Q ss_pred EEeecCCCCcc----cHHHHHHHHhhhh
Q psy7538 326 CNLTSNKDYKI----TWQEICDIGKDIV 349 (543)
Q Consensus 326 yni~s~~~~~~----t~~e~~~~i~~~~ 349 (543)
|+++++ ..+ +..|+++.+....
T Consensus 245 ~~~~~g--~~~~~~~~~~~~~~~~~~~~ 270 (276)
T PRK05875 245 INVDGG--HMLRRGPDFSSMLEPVFGAD 270 (276)
T ss_pred EEECCC--eeccCCccHHHHHHHHhhHH
Confidence 999887 444 6777777666544
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.7e-17 Score=162.19 Aligned_cols=222 Identities=13% Similarity=0.130 Sum_probs=147.4
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEE-ecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLL-MRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l-~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
+++++|+||||||+||+++++.|++.|+ +|.++ .|+. +++++.. +.+. ....++.++.+|
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~G~---~v~i~~~r~~------~~~~~~~-----~~~~-----~~~~~~~~~~~D 64 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLANDGA---LVAIHYGRNK------QAADETI-----REIE-----SNGGKAFLIEAD 64 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEcCCCH------HHHHHHH-----HHHH-----hcCCcEEEEEcC
Confidence 4578999999999999999999999987 56554 4543 1221111 1111 112467889999
Q ss_pred CCCCCCCCCHHHHHHHhc-------------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc-cC
Q psy7538 107 ITQLKLGISEIDKKELID-------------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM-KN 165 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~-------------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~ 165 (543)
+++++ ++..+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+.+. .+
T Consensus 65 ~~d~~------~i~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 138 (254)
T PRK12746 65 LNSID------GVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA 138 (254)
T ss_pred cCCHH------HHHHHHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc
Confidence 99875 5555444 58999999986432 1224567889999999999998763 23
Q ss_pred CceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----
Q psy7538 166 LKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME---- 241 (543)
Q Consensus 166 l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~---- 241 (543)
..++|++||..+..... ....|+.||+..|.+.+....
T Consensus 139 ~~~~v~~sS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~~~~~~~~ 180 (254)
T PRK12746 139 EGRVINISSAEVRLGFT--------------------------------------GSIAYGLSKGALNTMTLPLAKHLGE 180 (254)
T ss_pred CCEEEEECCHHhcCCCC--------------------------------------CCcchHhhHHHHHHHHHHHHHHHhh
Confidence 45899999986643211 016799999999998876654
Q ss_pred cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCC
Q psy7538 242 LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESE 321 (543)
Q Consensus 242 ~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~ 321 (543)
.++++++++|+.+.++...... ....+.....+ ......+++++|+++++..++..... ..
T Consensus 181 ~~i~v~~v~pg~~~t~~~~~~~--------~~~~~~~~~~~--------~~~~~~~~~~~dva~~~~~l~~~~~~---~~ 241 (254)
T PRK12746 181 RGITVNTIMPGYTKTDINAKLL--------DDPEIRNFATN--------SSVFGRIGQVEDIADAVAFLASSDSR---WV 241 (254)
T ss_pred cCcEEEEEEECCccCcchhhhc--------cChhHHHHHHh--------cCCcCCCCCHHHHHHHHHHHcCcccC---Cc
Confidence 4799999999998776432110 00111111111 11223567899999999877765321 12
Q ss_pred CCcEEEeecC
Q psy7538 322 RKSVCNLTSN 331 (543)
Q Consensus 322 ~~~vyni~s~ 331 (543)
.+++|+++++
T Consensus 242 ~g~~~~i~~~ 251 (254)
T PRK12746 242 TGQIIDVSGG 251 (254)
T ss_pred CCCEEEeCCC
Confidence 4779999865
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.2e-17 Score=159.74 Aligned_cols=218 Identities=14% Similarity=0.147 Sum_probs=150.7
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|+||++++++|++.|+ +|+++.|.... .+++.+ .++ ....++..+.+|+
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~---~vi~~~r~~~~---~~~~~~--------~~~-----~~~~~~~~~~~Dl 64 (250)
T PRK07774 4 FDDKVAIVTGAAGGIGQAYAEALAREGA---SVVVADINAEG---AERVAK--------QIV-----ADGGTAIAVQVDV 64 (250)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHH--------HHH-----hcCCcEEEEEcCC
Confidence 4679999999999999999999999986 78899887432 122221 111 1123567889999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC----------cccHHHHHHHHHHHHHHHHHHHHhc---cCCc
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF----------DEPIKTAVILNTRGTRDMLELSKQM---KNLK 167 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~----------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~ 167 (543)
++++ +++.+++ .+|+|||+|+.... .+.++..+++|+.|+.++++++... .+-+
T Consensus 65 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 138 (250)
T PRK07774 65 SDPD------SAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGG 138 (250)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCc
Confidence 9875 4544443 58999999996421 1334567899999999999998753 1346
Q ss_pred eEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cC
Q psy7538 168 CFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LG 243 (543)
Q Consensus 168 ~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~ 243 (543)
++|++||..+... .+.|+.||+..|.+++...+ .+
T Consensus 139 ~iv~~sS~~~~~~-----------------------------------------~~~Y~~sK~a~~~~~~~l~~~~~~~~ 177 (250)
T PRK07774 139 AIVNQSSTAAWLY-----------------------------------------SNFYGLAKVGLNGLTQQLARELGGMN 177 (250)
T ss_pred EEEEEecccccCC-----------------------------------------ccccHHHHHHHHHHHHHHHHHhCccC
Confidence 9999999865321 16899999999999888765 37
Q ss_pred CcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCC
Q psy7538 244 MPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERK 323 (543)
Q Consensus 244 lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~ 323 (543)
+++.+++|+.+..+.... ..+..+.....++... .-+..++|+|++++.++..... ...+
T Consensus 178 i~v~~v~pg~~~t~~~~~--------~~~~~~~~~~~~~~~~---------~~~~~~~d~a~~~~~~~~~~~~---~~~g 237 (250)
T PRK07774 178 IRVNAIAPGPIDTEATRT--------VTPKEFVADMVKGIPL---------SRMGTPEDLVGMCLFLLSDEAS---WITG 237 (250)
T ss_pred eEEEEEecCcccCccccc--------cCCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhChhhh---CcCC
Confidence 999999998876554321 1122233333333221 1135689999999888765421 1247
Q ss_pred cEEEeecC
Q psy7538 324 SVCNLTSN 331 (543)
Q Consensus 324 ~vyni~s~ 331 (543)
++||+.++
T Consensus 238 ~~~~v~~g 245 (250)
T PRK07774 238 QIFNVDGG 245 (250)
T ss_pred CEEEECCC
Confidence 89999887
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.7e-18 Score=166.96 Aligned_cols=225 Identities=12% Similarity=0.131 Sum_probs=152.7
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+.+++++||||+|+||.++++.|++.|+ +|+++.|... +++++. .....++.++.+|+
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G~---~v~~~~r~~~------~~~~~~-------------~~~~~~~~~~~~D~ 61 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEGA---RVVIADIKPA------RARLAA-------------LEIGPAAIAVSLDV 61 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCC---EEEEEcCCHH------HHHHHH-------------HHhCCceEEEEccC
Confidence 4678999999999999999999999987 7888888642 222211 11123578899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc----cCCceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM----KNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~l~~~ 169 (543)
++++ +++.+++ .+|++||+|+.... .+.++..+++|+.++.++++++... +.-.++
T Consensus 62 ~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i 135 (257)
T PRK07067 62 TRQD------SIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKI 135 (257)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEE
Confidence 9876 5555544 58999999997532 2345668999999999999998642 112479
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+..... + -..|+.||+..+.+.+..+. ++++
T Consensus 136 v~~sS~~~~~~~~---------~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~ 177 (257)
T PRK07067 136 INMASQAGRRGEA---------L-----------------------------VSHYCATKAAVISYTQSAALALIRHGIN 177 (257)
T ss_pred EEeCCHHhCCCCC---------C-----------------------------CchhhhhHHHHHHHHHHHHHHhcccCeE
Confidence 9999974322110 1 16899999999988876654 5899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHh---cCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCC
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAG---KGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~---~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~ 322 (543)
+.++||+.|.++..+... ..+.... .+......+.+.....+++++|+|++++.++..... -..
T Consensus 178 v~~i~pg~v~t~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~---~~~ 244 (257)
T PRK07067 178 VNAIAPGVVDTPMWDQVD----------ALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLASADAD---YIV 244 (257)
T ss_pred EEEEeeCcccchhhhhhh----------hhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHHHHhCcccc---ccc
Confidence 999999999886432110 0000000 000000122333456789999999999988865432 124
Q ss_pred CcEEEeecC
Q psy7538 323 KSVCNLTSN 331 (543)
Q Consensus 323 ~~vyni~s~ 331 (543)
+.+|++.++
T Consensus 245 g~~~~v~gg 253 (257)
T PRK07067 245 AQTYNVDGG 253 (257)
T ss_pred CcEEeecCC
Confidence 789999887
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.7e-17 Score=159.53 Aligned_cols=222 Identities=13% Similarity=0.049 Sum_probs=147.3
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
++++|+||||+||||++++++|++.|+ +|++..|+.. +++.+. ...++ ....++..+.+|++
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~---~v~~~~~~~~-----~~~~~~-----~~~~~-----~~~~~~~~~~~D~~ 66 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGS---LVVVNAKKRA-----EEMNET-----LKMVK-----ENGGEGIGVLADVS 66 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCCh-----HHHHHH-----HHHHH-----HcCCeeEEEEeccC
Confidence 578999999999999999999999987 6666666532 112111 11111 11235678889999
Q ss_pred CCCCCCCHHHHHHHh-------cCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc-cCCceEEEEe
Q psy7538 109 QLKLGISEIDKKELI-------DNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM-KNLKCFTYIS 173 (543)
Q Consensus 109 ~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~vS 173 (543)
+++ ++..++ .++|+|||+||.... .+.++..+++|+.|+.++++++.+. +.-.+||++|
T Consensus 67 ~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~s 140 (252)
T PRK06077 67 TRE------GCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIA 140 (252)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEc
Confidence 876 444443 368999999996322 1224567899999999999988753 2235899999
Q ss_pred cCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh---cCCcEEEEe
Q psy7538 174 TAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME---LGMPCMILR 250 (543)
Q Consensus 174 T~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~---~~lp~~IlR 250 (543)
|..+..... + .+.|+.+|+..|.+++.++. .++.+.+++
T Consensus 141 S~~~~~~~~---------~-----------------------------~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~ 182 (252)
T PRK06077 141 SVAGIRPAY---------G-----------------------------LSIYGAMKAAVINLTKYLALELAPKIRVNAIA 182 (252)
T ss_pred chhccCCCC---------C-----------------------------chHHHHHHHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 986543211 0 16899999999999987765 268889999
Q ss_pred cCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeec
Q psy7538 251 PSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTS 330 (543)
Q Consensus 251 ps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s 330 (543)
|+.|.++.......+.. ... ..... .......+++++|+|++++.++..... .+++||+.+
T Consensus 183 Pg~i~t~~~~~~~~~~~---~~~---~~~~~--------~~~~~~~~~~~~dva~~~~~~~~~~~~-----~g~~~~i~~ 243 (252)
T PRK06077 183 PGFVKTKLGESLFKVLG---MSE---KEFAE--------KFTLMGKILDPEEVAEFVAAILKIESI-----TGQVFVLDS 243 (252)
T ss_pred eCCccChHHHhhhhccc---ccH---HHHHH--------hcCcCCCCCCHHHHHHHHHHHhCcccc-----CCCeEEecC
Confidence 99886653211110000 000 00000 011223689999999999998864433 478999998
Q ss_pred C
Q psy7538 331 N 331 (543)
Q Consensus 331 ~ 331 (543)
+
T Consensus 244 g 244 (252)
T PRK06077 244 G 244 (252)
T ss_pred C
Confidence 7
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.6e-16 Score=159.08 Aligned_cols=215 Identities=11% Similarity=0.046 Sum_probs=141.7
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
.+|+|+||||+|+||++++++|++.|+ +|+++.|+.. +++++. .....++..+.+|++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~---~V~~~~r~~~------~~~~l~-------------~~~~~~~~~~~~D~~ 60 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGH---RVVGTVRSEA------ARADFE-------------ALHPDRALARLLDVT 60 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcC---EEEEEeCCHH------HHHHHH-------------hhcCCCeeEEEccCC
Confidence 468999999999999999999999986 7899999742 222211 111246788899999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCccCCCc-------ccHHHHHHHHHHHHHHHHHHHHh---ccCCceEEE
Q psy7538 109 QLKLGISEIDKKELID-------NVDIVYHVAATIRFD-------EPIKTAVILNTRGTRDMLELSKQ---MKNLKCFTY 171 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~Nv~gt~~ll~~a~~---~~~l~~~V~ 171 (543)
+++ ++..+++ ++|+|||+||..... +.++..+++|+.|+.++++++.. ..+..++|+
T Consensus 61 d~~------~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~ 134 (277)
T PRK06180 61 DFD------AIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVN 134 (277)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEE
Confidence 875 5555544 589999999975431 33456799999999999998643 124578999
Q ss_pred EecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEE
Q psy7538 172 ISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCM 247 (543)
Q Consensus 172 vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~ 247 (543)
+||..+..... + ...|+.+|+..|.+++..+. .|++++
T Consensus 135 iSS~~~~~~~~---------~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~ 176 (277)
T PRK06180 135 ITSMGGLITMP---------G-----------------------------IGYYCGSKFALEGISESLAKEVAPFGIHVT 176 (277)
T ss_pred EecccccCCCC---------C-----------------------------cchhHHHHHHHHHHHHHHHHHhhhhCcEEE
Confidence 99975432210 0 16899999999998877654 489999
Q ss_pred EEecCeeeecCCCCC-CCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhc
Q psy7538 248 ILRPSIVVPIYKEPL-PGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFL 315 (543)
Q Consensus 248 IlRps~V~G~~~~p~-~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~ 315 (543)
++||+.|.++..++. ...................... ......+..++|+|++++.++....
T Consensus 177 ~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~dva~~~~~~l~~~~ 239 (277)
T PRK06180 177 AVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQARE------AKSGKQPGDPAKAAQAILAAVESDE 239 (277)
T ss_pred EEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHH------hhccCCCCCHHHHHHHHHHHHcCCC
Confidence 999999977643321 0000000000011111111000 0111234678999999999887654
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.7e-16 Score=156.83 Aligned_cols=232 Identities=13% Similarity=0.115 Sum_probs=159.0
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+++++||||||+||+.+++.|++.|. +|+++.|+.. +++++.+ .+ ...++.++.+|+++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~---~v~~~~r~~~------~~~~~~~-----~~-------~~~~~~~~~~D~~~ 60 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD---RVLALDIDAA------ALAAFAD-----AL-------GDARFVPVACDLTD 60 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHHH-----Hh-------cCCceEEEEecCCC
Confidence 57899999999999999999999986 7888988642 2211110 01 11367889999998
Q ss_pred CCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEEEE
Q psy7538 110 LKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFTYI 172 (543)
Q Consensus 110 ~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~v 172 (543)
++ ++..+++ ++|+|||+|+.... .+.+...+++|+.|+.++++.+... .+..++|++
T Consensus 61 ~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ 134 (257)
T PRK07074 61 AA------SLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNI 134 (257)
T ss_pred HH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 75 5555544 48999999986532 1223456789999999998888431 245789999
Q ss_pred ecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEE
Q psy7538 173 STAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMI 248 (543)
Q Consensus 173 ST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~I 248 (543)
||..+..... + ..|+.+|+..|.+++.++. .++++.+
T Consensus 135 sS~~~~~~~~--------------------------------------~-~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~ 175 (257)
T PRK07074 135 GSVNGMAALG--------------------------------------H-PAYSAAKAGLIHYTKLLAVEYGRFGIRANA 175 (257)
T ss_pred cchhhcCCCC--------------------------------------C-cccHHHHHHHHHHHHHHHHHHhHhCeEEEE
Confidence 9975432100 0 4799999999999888765 4799999
Q ss_pred EecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEe
Q psy7538 249 LRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNL 328 (543)
Q Consensus 249 lRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni 328 (543)
+||+.+.++.... .......+...... .....++++++|++++++.++..... ...+.++++
T Consensus 176 v~pg~v~t~~~~~------~~~~~~~~~~~~~~---------~~~~~~~~~~~d~a~~~~~l~~~~~~---~~~g~~~~~ 237 (257)
T PRK07074 176 VAPGTVKTQAWEA------RVAANPQVFEELKK---------WYPLQDFATPDDVANAVLFLASPAAR---AITGVCLPV 237 (257)
T ss_pred EEeCcCCcchhhc------ccccChHHHHHHHh---------cCCCCCCCCHHHHHHHHHHHcCchhc---CcCCcEEEe
Confidence 9999887763211 00001112221111 12346899999999999999864322 124778888
Q ss_pred ecCCCCcccHHHHHHHHhh
Q psy7538 329 TSNKDYKITWQEICDIGKD 347 (543)
Q Consensus 329 ~s~~~~~~t~~e~~~~i~~ 347 (543)
.++ .....+|+.+.+.+
T Consensus 238 ~~g--~~~~~~~~~~~~~~ 254 (257)
T PRK07074 238 DGG--LTAGNREMARTLTL 254 (257)
T ss_pred CCC--cCcCChhhhhhhcc
Confidence 887 77788998887654
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=9.9e-17 Score=158.31 Aligned_cols=220 Identities=12% Similarity=0.138 Sum_probs=148.6
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
.|+|+||||+|+||++++++|++.|+ +|+++.|..... .+... +.++ ....++.++.+|+++
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~---~vi~~~r~~~~~--~~~~~--------~~~~-----~~~~~~~~~~~D~~~ 63 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGF---DLAINDRPDDEE--LAATQ--------QELR-----ALGVEVIFFPADVAD 63 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCC---EEEEEecCchhH--HHHHH--------HHHH-----hcCCceEEEEecCCC
Confidence 47899999999999999999999986 788888864321 11111 1111 112468899999998
Q ss_pred CCCCCCHHHHHHHhc-------CccEEEEcCccCCC---------cccHHHHHHHHHHHHHHHHHHHHhc----cC----
Q psy7538 110 LKLGISEIDKKELID-------NVDIVYHVAATIRF---------DEPIKTAVILNTRGTRDMLELSKQM----KN---- 165 (543)
Q Consensus 110 ~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~---------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~---- 165 (543)
++ ++..+++ .+|+|||+|+.... .+.++..+++|+.|+.++++.+... ++
T Consensus 64 ~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~ 137 (256)
T PRK12745 64 LS------AHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEEL 137 (256)
T ss_pred HH------HHHHHHHHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCC
Confidence 75 4544443 68999999986431 1445668999999999998887542 11
Q ss_pred -CceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh---
Q psy7538 166 -LKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME--- 241 (543)
Q Consensus 166 -l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~--- 241 (543)
..++|++||..+..... ....|+.+|+..|.+++.++.
T Consensus 138 ~~~~iv~~sS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~l~~~~~ 179 (256)
T PRK12745 138 PHRSIVFVSSVNAIMVSP--------------------------------------NRGEYCISKAGLSMAAQLFAARLA 179 (256)
T ss_pred CCcEEEEECChhhccCCC--------------------------------------CCcccHHHHHHHHHHHHHHHHHHH
Confidence 56799999985532211 016899999999999887764
Q ss_pred -cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCC
Q psy7538 242 -LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKES 320 (543)
Q Consensus 242 -~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~ 320 (543)
++++++++||+.+.++...+ +.+ ........+. .....+.+++|+++++..++..... .
T Consensus 180 ~~gi~v~~i~pg~v~t~~~~~---~~~------~~~~~~~~~~--------~~~~~~~~~~d~a~~i~~l~~~~~~---~ 239 (256)
T PRK12745 180 EEGIGVYEVRPGLIKTDMTAP---VTA------KYDALIAKGL--------VPMPRWGEPEDVARAVAALASGDLP---Y 239 (256)
T ss_pred HhCCEEEEEecCCCcCccccc---cch------hHHhhhhhcC--------CCcCCCcCHHHHHHHHHHHhCCccc---c
Confidence 58999999999987764322 111 1111111111 1123577999999998887754321 1
Q ss_pred CCCcEEEeecC
Q psy7538 321 ERKSVCNLTSN 331 (543)
Q Consensus 321 ~~~~vyni~s~ 331 (543)
..+.+|++.++
T Consensus 240 ~~G~~~~i~gg 250 (256)
T PRK12745 240 STGQAIHVDGG 250 (256)
T ss_pred cCCCEEEECCC
Confidence 24789999876
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.1e-16 Score=159.98 Aligned_cols=229 Identities=14% Similarity=0.164 Sum_probs=150.9
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
.+|+++||||+|+||++++++|++.|. +|+++.|+.. +++++ .+.++ ....++.++.+|++
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~---~V~~~~r~~~------~~~~~-----~~~~~-----~~~~~~~~~~~Dl~ 69 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGF---PVALGARRVE------KCEEL-----VDKIR-----ADGGEAVAFPLDVT 69 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHH-----HHHHH-----hcCCeEEEEECCCC
Confidence 457999999999999999999999986 7888888632 22221 11111 11236788899999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEEE
Q psy7538 109 QLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFTY 171 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~ 171 (543)
+++ ++..+++ .+|+|||+|+.... .+.+...+++|+.|+.++++.+... .+..+||+
T Consensus 70 ~~~------~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~ 143 (274)
T PRK07775 70 DPD------SVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIF 143 (274)
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEE
Confidence 875 5655544 57999999987532 1334566899999999999887531 24568999
Q ss_pred EecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEE
Q psy7538 172 ISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCM 247 (543)
Q Consensus 172 vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~ 247 (543)
+||..+..... ....|+.+|+..|.+++.+.. .|++++
T Consensus 144 isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~ 185 (274)
T PRK07775 144 VGSDVALRQRP--------------------------------------HMGAYGAAKAGLEAMVTNLQMELEGTGVRAS 185 (274)
T ss_pred ECChHhcCCCC--------------------------------------CcchHHHHHHHHHHHHHHHHHHhcccCeEEE
Confidence 99985543211 015799999999999988764 389999
Q ss_pred EEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEE
Q psy7538 248 ILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCN 327 (543)
Q Consensus 248 IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyn 327 (543)
++||+.+.+......+ . .....++..... .+ ......++++||+|++++.++.++.. +.+||
T Consensus 186 ~v~pG~~~t~~~~~~~---~--~~~~~~~~~~~~------~~-~~~~~~~~~~~dva~a~~~~~~~~~~------~~~~~ 247 (274)
T PRK07775 186 IVHPGPTLTGMGWSLP---A--EVIGPMLEDWAK------WG-QARHDYFLRASDLARAITFVAETPRG------AHVVN 247 (274)
T ss_pred EEeCCcccCcccccCC---h--hhhhHHHHHHHH------hc-ccccccccCHHHHHHHHHHHhcCCCC------CCeeE
Confidence 9999877443211000 0 000111111111 01 12245689999999999998876432 56899
Q ss_pred eecCCCCcccH
Q psy7538 328 LTSNKDYKITW 338 (543)
Q Consensus 328 i~s~~~~~~t~ 338 (543)
+.-....++..
T Consensus 248 ~~~~~~~~~~~ 258 (274)
T PRK07775 248 MEVQPEAPLRA 258 (274)
T ss_pred EeeccCCCCCC
Confidence 87543344433
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.8e-16 Score=158.27 Aligned_cols=224 Identities=13% Similarity=0.098 Sum_probs=151.0
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+|+||||+|+||++++++|++.|+ +|.+..|+...... +.+.+. ++ ....++.++.+|+
T Consensus 53 l~~k~vlITGas~gIG~~~a~~l~~~G~---~V~i~~~~~~~~~~-~~~~~~--------~~-----~~~~~~~~~~~Dl 115 (300)
T PRK06128 53 LQGRKALITGADSGIGRATAIAFAREGA---DIALNYLPEEEQDA-AEVVQL--------IQ-----AEGRKAVALPGDL 115 (300)
T ss_pred cCCCEEEEecCCCcHHHHHHHHHHHcCC---EEEEEeCCcchHHH-HHHHHH--------HH-----HcCCeEEEEecCC
Confidence 5689999999999999999999999987 56666655432111 112111 11 1224678899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCC----C----cccHHHHHHHHHHHHHHHHHHHHhc-cCCceEEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIR----F----DEPIKTAVILNTRGTRDMLELSKQM-KNLKCFTY 171 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~ 171 (543)
++++ +++.+++ ++|+|||+|+... + .+.++..+++|+.|+.++++++... ..-.++|+
T Consensus 116 ~~~~------~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~ 189 (300)
T PRK06128 116 KDEA------FCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIIN 189 (300)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEE
Confidence 9875 4554443 6899999999642 1 2456778999999999999999753 22258999
Q ss_pred EecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEE
Q psy7538 172 ISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCM 247 (543)
Q Consensus 172 vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~ 247 (543)
+||..++..... ...|+.||+..+.+++..+. +|+++.
T Consensus 190 ~sS~~~~~~~~~--------------------------------------~~~Y~asK~a~~~~~~~la~el~~~gI~v~ 231 (300)
T PRK06128 190 TGSIQSYQPSPT--------------------------------------LLDYASTKAAIVAFTKALAKQVAEKGIRVN 231 (300)
T ss_pred ECCccccCCCCC--------------------------------------chhHHHHHHHHHHHHHHHHHHhhhcCcEEE
Confidence 999866432110 15799999999999887654 589999
Q ss_pred EEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEE
Q psy7538 248 ILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCN 327 (543)
Q Consensus 248 IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyn 327 (543)
+++|+.|.++..... ......+..+... .....+...+|++++++.++..... -..+++|+
T Consensus 232 ~v~PG~i~t~~~~~~-------~~~~~~~~~~~~~---------~p~~r~~~p~dva~~~~~l~s~~~~---~~~G~~~~ 292 (300)
T PRK06128 232 AVAPGPVWTPLQPSG-------GQPPEKIPDFGSE---------TPMKRPGQPVEMAPLYVLLASQESS---YVTGEVFG 292 (300)
T ss_pred EEEECcCcCCCcccC-------CCCHHHHHHHhcC---------CCCCCCcCHHHHHHHHHHHhCcccc---CccCcEEe
Confidence 999999987753210 0011122222211 1123456889999998887754322 12478999
Q ss_pred eecC
Q psy7538 328 LTSN 331 (543)
Q Consensus 328 i~s~ 331 (543)
+.++
T Consensus 293 v~gg 296 (300)
T PRK06128 293 VTGG 296 (300)
T ss_pred eCCC
Confidence 9877
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.3e-16 Score=154.28 Aligned_cols=219 Identities=15% Similarity=0.166 Sum_probs=149.4
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
.+|+|+||||+|++|+++++.|++.|+ +|.++.|+... .+.+.+ .+ .....++.++.+|++
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~---~v~~~~r~~~~---~~~~~~--------~~-----~~~~~~~~~~~~D~~ 64 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGA---KVVIYDSNEEA---AEALAA--------EL-----RAAGGEARVLVFDVS 64 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCChhH---HHHHHH--------HH-----HhcCCceEEEEccCC
Confidence 468999999999999999999999987 68888887532 111111 11 112346888999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCccCCCc-------ccHHHHHHHHHHHHHHHHHHHHhc---cCCceEEE
Q psy7538 109 QLKLGISEIDKKELID-------NVDIVYHVAATIRFD-------EPIKTAVILNTRGTRDMLELSKQM---KNLKCFTY 171 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~ 171 (543)
+++ ++..+++ .+|+|||+||..... +.+...++.|+.++.++++.+... .+.++||+
T Consensus 65 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~ 138 (246)
T PRK05653 65 DEA------AVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVN 138 (246)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 875 4554443 469999999875431 234567899999999999888531 25689999
Q ss_pred EecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEE
Q psy7538 172 ISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCM 247 (543)
Q Consensus 172 vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~ 247 (543)
+||..+..... ....|+.+|...|.+++...+ .++.++
T Consensus 139 ~ss~~~~~~~~--------------------------------------~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~ 180 (246)
T PRK05653 139 ISSVSGVTGNP--------------------------------------GQTNYSAAKAGVIGFTKALALELASRGITVN 180 (246)
T ss_pred ECcHHhccCCC--------------------------------------CCcHhHhHHHHHHHHHHHHHHHHhhcCeEEE
Confidence 99974422110 016799999998888877654 479999
Q ss_pred EEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEE
Q psy7538 248 ILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCN 327 (543)
Q Consensus 248 IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyn 327 (543)
++||+.+.++...++ ........... .....+++++|+++++..++..... ...+++|+
T Consensus 181 ~i~pg~~~~~~~~~~---------~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~~~~~~~~---~~~g~~~~ 239 (246)
T PRK05653 181 AVAPGFIDTDMTEGL---------PEEVKAEILKE---------IPLGRLGQPEEVANAVAFLASDAAS---YITGQVIP 239 (246)
T ss_pred EEEeCCcCCcchhhh---------hHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHcCchhc---CccCCEEE
Confidence 999999988743210 01111111111 1125578899999999988754322 12578999
Q ss_pred eecC
Q psy7538 328 LTSN 331 (543)
Q Consensus 328 i~s~ 331 (543)
++++
T Consensus 240 ~~gg 243 (246)
T PRK05653 240 VNGG 243 (246)
T ss_pred eCCC
Confidence 8876
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=8.5e-17 Score=159.45 Aligned_cols=229 Identities=11% Similarity=0.117 Sum_probs=150.3
Q ss_pred hhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 26 KTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 26 ~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
..+++++++||||+|+||++++++|++.|+ +|.++.|+... .+.+.+. . +. .++.++.+
T Consensus 7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~---~V~~~~r~~~~---~~~~~~~------------~-~~--~~~~~~~~ 65 (264)
T PRK12829 7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGA---RVHVCDVSEAA---LAATAAR------------L-PG--AKVTATVA 65 (264)
T ss_pred hccCCCEEEEeCCCCcHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHH------------H-hc--CceEEEEc
Confidence 346889999999999999999999999987 78899986431 1112111 0 11 15788999
Q ss_pred cCCCCCCCCCHHHHHHHh-------cCccEEEEcCccCCC--------cccHHHHHHHHHHHHHHHHHHHHhc---cCC-
Q psy7538 106 DITQLKLGISEIDKKELI-------DNVDIVYHVAATIRF--------DEPIKTAVILNTRGTRDMLELSKQM---KNL- 166 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l- 166 (543)
|+++++ ++..++ .++|+|||+||.... .+.+...+++|+.|+.++++.+... .+.
T Consensus 66 D~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 139 (264)
T PRK12829 66 DVADPA------QVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHG 139 (264)
T ss_pred cCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC
Confidence 999875 454444 368999999997621 1345678999999999999887431 133
Q ss_pred ceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----c
Q psy7538 167 KCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----L 242 (543)
Q Consensus 167 ~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~ 242 (543)
+.++++||..+..... . ...|+.+|+..|.++...+. .
T Consensus 140 ~~vv~~ss~~~~~~~~----------~----------------------------~~~y~~~K~a~~~~~~~l~~~~~~~ 181 (264)
T PRK12829 140 GVIIALSSVAGRLGYP----------G----------------------------RTPYAASKWAVVGLVKSLAIELGPL 181 (264)
T ss_pred eEEEEecccccccCCC----------C----------------------------CchhHHHHHHHHHHHHHHHHHHhhc
Confidence 5688888764421110 0 15799999999999887654 4
Q ss_pred CCcEEEEecCeeeecCCCCCCCCCCCC--CchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCC
Q psy7538 243 GMPCMILRPSIVVPIYKEPLPGWTDNI--NGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKES 320 (543)
Q Consensus 243 ~lp~~IlRps~V~G~~~~p~~gw~d~~--~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~ 320 (543)
+++++++||+.++++..+......... .+.........+ ......+++++|+++++..++..... .
T Consensus 182 ~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~d~a~~~~~l~~~~~~---~ 249 (264)
T PRK12829 182 GIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLE---------KISLGRMVEPEDIAATALFLASPAAR---Y 249 (264)
T ss_pred CeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHh---------cCCCCCCCCHHHHHHHHHHHcCcccc---C
Confidence 899999999999887543211000000 000001111000 11223589999999998887754221 1
Q ss_pred CCCcEEEeecC
Q psy7538 321 ERKSVCNLTSN 331 (543)
Q Consensus 321 ~~~~vyni~s~ 331 (543)
..++.|+++++
T Consensus 250 ~~g~~~~i~~g 260 (264)
T PRK12829 250 ITGQAISVDGN 260 (264)
T ss_pred ccCcEEEeCCC
Confidence 25789999887
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.7e-16 Score=155.65 Aligned_cols=226 Identities=11% Similarity=0.105 Sum_probs=144.9
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
-+++|+++||||+|+||++++++|++.|+ +|.++.|... ..+..++ + .....++.++.+|
T Consensus 5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~---~v~~~~r~~~---~~~~~~~---------~-----~~~~~~~~~~~~D 64 (260)
T PRK12823 5 RFAGKVVVVTGAAQGIGRGVALRAAAEGA---RVVLVDRSEL---VHEVAAE---------L-----RAAGGEALALTAD 64 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCchH---HHHHHHH---------H-----HhcCCeEEEEEEe
Confidence 36789999999999999999999999987 7888888632 1111111 1 1122467889999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CccEEEEcCccCC----C----cccHHHHHHHHHHHHHHHHHHHH----hccCCc
Q psy7538 107 ITQLKLGISEIDKKELID-------NVDIVYHVAATIR----F----DEPIKTAVILNTRGTRDMLELSK----QMKNLK 167 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~~l~ 167 (543)
+++++ ++..+++ ++|++||+|+... + .+.+...+++|+.|+..+++.+. +. +..
T Consensus 65 ~~~~~------~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g 137 (260)
T PRK12823 65 LETYA------GAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQ-GGG 137 (260)
T ss_pred CCCHH------HHHHHHHHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCC
Confidence 99865 4444443 5899999998431 1 23355678899998876665544 33 457
Q ss_pred eEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cC
Q psy7538 168 CFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LG 243 (543)
Q Consensus 168 ~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~ 243 (543)
++|++||..+.+. + ...|+.||+..|.+++.++. ++
T Consensus 138 ~iv~~sS~~~~~~-----------~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~g 177 (260)
T PRK12823 138 AIVNVSSIATRGI-----------N-----------------------------RVPYSAAKGGVNALTASLAFEYAEHG 177 (260)
T ss_pred eEEEEcCccccCC-----------C-----------------------------CCccHHHHHHHHHHHHHHHHHhcccC
Confidence 8999999854321 0 15799999999999987764 48
Q ss_pred CcEEEEecCeeeecCCC-CC-CCCCCC-CCc-hHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCC
Q psy7538 244 MPCMILRPSIVVPIYKE-PL-PGWTDN-ING-PTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKE 319 (543)
Q Consensus 244 lp~~IlRps~V~G~~~~-p~-~gw~d~-~~g-~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~ 319 (543)
+++.+++|+.|+++... +. ..+.+. ... ...+......+.+ ..-+.+++|+|++++.++.....
T Consensus 178 i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~s~~~~--- 245 (260)
T PRK12823 178 IRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSL---------MKRYGTIDEQVAAILFLASDEAS--- 245 (260)
T ss_pred cEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCC---------cccCCCHHHHHHHHHHHcCcccc---
Confidence 99999999999886311 00 000000 000 1112222222211 11234689999998887754321
Q ss_pred CCCCcEEEeecC
Q psy7538 320 SERKSVCNLTSN 331 (543)
Q Consensus 320 ~~~~~vyni~s~ 331 (543)
-..+.++++.++
T Consensus 246 ~~~g~~~~v~gg 257 (260)
T PRK12823 246 YITGTVLPVGGG 257 (260)
T ss_pred cccCcEEeecCC
Confidence 124778998766
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.9e-16 Score=155.12 Aligned_cols=222 Identities=13% Similarity=0.114 Sum_probs=151.9
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+|+||||+|+||+.++++|++.|+ +|+++.|+.. +++++. +.++ ....++..+.+|+
T Consensus 8 ~~~k~vlItGa~g~iG~~ia~~l~~~G~---~V~~~~r~~~------~~~~~~-----~~i~-----~~~~~~~~~~~D~ 68 (255)
T PRK07523 8 LTGRRALVTGSSQGIGYALAEGLAQAGA---EVILNGRDPA------KLAAAA-----ESLK-----GQGLSAHALAFDV 68 (255)
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHcCC---EEEEEeCCHH------HHHHHH-----HHHH-----hcCceEEEEEccC
Confidence 4789999999999999999999999987 7888888642 222211 1121 1123578899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ +++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++++.+. .+.+++|
T Consensus 69 ~~~~------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv 142 (255)
T PRK07523 69 TDHD------AVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKII 142 (255)
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEE
Confidence 9875 5666554 48999999997532 2335667889999999999988753 2457999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... + ...|+.+|...|.+++..+. +|+++
T Consensus 143 ~iss~~~~~~~~---------~-----------------------------~~~y~~sK~a~~~~~~~~a~e~~~~gi~v 184 (255)
T PRK07523 143 NIASVQSALARP---------G-----------------------------IAPYTATKGAVGNLTKGMATDWAKHGLQC 184 (255)
T ss_pred EEccchhccCCC---------C-----------------------------CccHHHHHHHHHHHHHHHHHHhhHhCeEE
Confidence 999974432110 0 16899999999999887654 58999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
.++||+.+.++..... .....+...+.... ....+..++|+|++++.++..... ...++++
T Consensus 185 ~~i~pg~~~t~~~~~~-------~~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~~~---~~~G~~i 245 (255)
T PRK07523 185 NAIAPGYFDTPLNAAL-------VADPEFSAWLEKRT---------PAGRWGKVEELVGACVFLASDASS---FVNGHVL 245 (255)
T ss_pred EEEEECcccCchhhhh-------ccCHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCchhc---CccCcEE
Confidence 9999998887643211 00011111121111 123466799999999888765332 1247788
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
++.++
T Consensus 246 ~~~gg 250 (255)
T PRK07523 246 YVDGG 250 (255)
T ss_pred EECCC
Confidence 88876
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.6e-16 Score=154.91 Aligned_cols=224 Identities=12% Similarity=0.122 Sum_probs=150.0
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|+||++|+++|++.|+ +|+++.|+... +++.. +.++ ...++.++.+|+
T Consensus 3 ~~~k~~lItG~sg~iG~~la~~l~~~G~---~v~~~~r~~~~------~~~~~-----~~~~------~~~~~~~~~~D~ 62 (252)
T PRK06138 3 LAGRVAIVTGAGSGIGRATAKLFAREGA---RVVVADRDAEA------AERVA-----AAIA------AGGRAFARQGDV 62 (252)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCC---eEEEecCCHHH------HHHHH-----HHHh------cCCeEEEEEcCC
Confidence 3689999999999999999999999986 78888887421 11110 1111 124688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHH----HhccCCceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELS----KQMKNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~l~~~ 169 (543)
++++ +++++++ ++|+|||+|+.... .+.++..+++|+.|+.++.+.+ ++. +.+++
T Consensus 63 ~~~~------~~~~~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~i 135 (252)
T PRK06138 63 GSAE------AVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQ-GGGSI 135 (252)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhc-CCeEE
Confidence 9876 5555543 68999999997532 1334557899999997776665 343 56799
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+..... ..+.|+.+|+..+.+++..+. .+++
T Consensus 136 i~~sS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~ 177 (252)
T PRK06138 136 VNTASQLALAGGR--------------------------------------GRAAYVASKGAIASLTRAMALDHATDGIR 177 (252)
T ss_pred EEECChhhccCCC--------------------------------------CccHHHHHHHHHHHHHHHHHHHHHhcCeE
Confidence 9999985532111 016899999999999887754 4899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
++++||+.++++.......+.. .+..+ .....+ ......+++++|++++++.++..... ...+..
T Consensus 178 v~~v~pg~~~t~~~~~~~~~~~---~~~~~-~~~~~~--------~~~~~~~~~~~d~a~~~~~l~~~~~~---~~~g~~ 242 (252)
T PRK06138 178 VNAVAPGTIDTPYFRRIFARHA---DPEAL-REALRA--------RHPMNRFGTAEEVAQAALFLASDESS---FATGTT 242 (252)
T ss_pred EEEEEECCccCcchhhhhcccc---ChHHH-HHHHHh--------cCCCCCCcCHHHHHHHHHHHcCchhc---CccCCE
Confidence 9999999998875443222111 11111 111111 01122378899999999998866542 124667
Q ss_pred EEeecC
Q psy7538 326 CNLTSN 331 (543)
Q Consensus 326 yni~s~ 331 (543)
+.+.++
T Consensus 243 ~~~~~g 248 (252)
T PRK06138 243 LVVDGG 248 (252)
T ss_pred EEECCC
Confidence 777654
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.4e-16 Score=153.82 Aligned_cols=226 Identities=14% Similarity=0.162 Sum_probs=151.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++++++||||||+||++++++|++.|+ +|+++.|+... .+++.+ .++ ....++.++.+|+
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~g~---~v~~~~r~~~~---~~~~~~--------~~~-----~~~~~~~~~~~d~ 61 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEEGA---KVAVFDLNREA---AEKVAA--------DIR-----AKGGNAQAFACDI 61 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEecCCHHH---HHHHHH--------HHH-----hcCCcEEEEEcCC
Confidence 4689999999999999999999999987 78888886421 122211 111 1124688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ +++.+++ ++|+|||+|+.... .+.++..+++|+.++.++++++... .+.+++|
T Consensus 62 ~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii 135 (250)
T TIGR03206 62 TDRD------SVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIV 135 (250)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEE
Confidence 9875 5555543 58999999986421 1234567999999999998887531 2567899
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+...... ...|+.+|+..+.+.+.++. .++++
T Consensus 136 ~iss~~~~~~~~~--------------------------------------~~~Y~~sK~a~~~~~~~la~~~~~~~i~v 177 (250)
T TIGR03206 136 NIASDAARVGSSG--------------------------------------EAVYAACKGGLVAFSKTMAREHARHGITV 177 (250)
T ss_pred EECchhhccCCCC--------------------------------------CchHHHHHHHHHHHHHHHHHHHhHhCcEE
Confidence 9999865432110 16899999988888877654 48999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
.++||+.++++......++. ..+..+...+..... ...+...+|+|+++..++..... ...++++
T Consensus 178 ~~v~pg~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~---~~~g~~~ 242 (250)
T TIGR03206 178 NVVCPGPTDTALLDDICGGA---ENPEKLREAFTRAIP---------LGRLGQPDDLPGAILFFSSDDAS---FITGQVL 242 (250)
T ss_pred EEEecCcccchhHHhhhhcc---CChHHHHHHHHhcCC---------ccCCcCHHHHHHHHHHHcCcccC---CCcCcEE
Confidence 99999999877433221111 122222222222211 11245678999999988765432 1347889
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
+++++
T Consensus 243 ~~~~g 247 (250)
T TIGR03206 243 SVSGG 247 (250)
T ss_pred EeCCC
Confidence 88765
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.5e-16 Score=159.14 Aligned_cols=236 Identities=14% Similarity=0.072 Sum_probs=151.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||+|+||++++++|++.|. +|.+..|+.. ++++. .+.++. ...++.++.+|+
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~G~---~Vv~~~r~~~------~l~~~-----~~~l~~-----~~~~~~~~~~Dv 64 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARRGA---RVVLGDVDKP------GLRQA-----VNHLRA-----EGFDVHGVMCDV 64 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHH-----HHHHHh-----cCCeEEEEeCCC
Confidence 5789999999999999999999999986 6778887642 22221 111211 123678899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHh----ccCCceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQ----MKNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~----~~~l~~~ 169 (543)
++++ ++..+++ .+|+|||+||.... .+.++..+++|+.|+.++++++.. .+.-.++
T Consensus 65 ~d~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~i 138 (275)
T PRK05876 65 RHRE------EVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHV 138 (275)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEE
Confidence 9876 5655544 47999999996432 133556789999999999988753 2124689
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHH----HHHHHHHHhhcCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCL----AEGLVAECMELGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~----aE~~v~~~~~~~lp 245 (543)
|++||..+..... ....|+.||+. +|.+..++..+|+.
T Consensus 139 v~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~~~~~l~~e~~~~gi~ 180 (275)
T PRK05876 139 VFTASFAGLVPNA--------------------------------------GLGAYGVAKYGVVGLAETLAREVTADGIG 180 (275)
T ss_pred EEeCChhhccCCC--------------------------------------CCchHHHHHHHHHHHHHHHHHHhhhcCcE
Confidence 9999986543211 11689999996 55555554436899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHH-HHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCc
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLL-IGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKS 324 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~-~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~ 324 (543)
+++++|+.|.++...... ... ............+......++++++|+|++++.++.+. +
T Consensus 181 v~~v~Pg~v~t~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai~~~---------~ 241 (275)
T PRK05876 181 VSVLCPMVVETNLVANSE----------RIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILAN---------R 241 (275)
T ss_pred EEEEEeCccccccccchh----------hhcCccccccccccccccccccccCCCHHHHHHHHHHHHHcC---------C
Confidence 999999988665322100 000 00000001112233345578899999999999887543 3
Q ss_pred EEEeecCCCCcccHHHHHHHHhhhh
Q psy7538 325 VCNLTSNKDYKITWQEICDIGKDIV 349 (543)
Q Consensus 325 vyni~s~~~~~~t~~e~~~~i~~~~ 349 (543)
.|.+.+ +..+..+.+...+..
T Consensus 242 ~~~~~~----~~~~~~~~~~~~~~~ 262 (275)
T PRK05876 242 LYVLPH----AASRASIRRRFERID 262 (275)
T ss_pred eEEecC----hhhHHHHHHHHHHHH
Confidence 455542 344555555444443
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.3e-16 Score=160.37 Aligned_cols=204 Identities=11% Similarity=0.064 Sum_probs=132.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++++||||||+||||++++++|++.|+ +|+++.|.... .++..+ .+ .....++.++.+|+
T Consensus 4 ~~~k~vlVtGasggIG~~la~~l~~~G~---~V~~~~r~~~~---~~~~~~--------~~-----~~~~~~~~~~~~D~ 64 (287)
T PRK06194 4 FAGKVAVITGAASGFGLAFARIGAALGM---KLVLADVQQDA---LDRAVA--------EL-----RAQGAEVLGVRTDV 64 (287)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCC---EEEEEeCChHH---HHHHHH--------HH-----HhcCCeEEEEECCC
Confidence 4679999999999999999999999986 78888886421 111111 11 11124688899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC----c---ccHHHHHHHHHHHHHHHHHHH----HhccC----
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF----D---EPIKTAVILNTRGTRDMLELS----KQMKN---- 165 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~----~---~~~~~~~~~Nv~gt~~ll~~a----~~~~~---- 165 (543)
++++ +++.+++ .+|+|||+||.... + +.++..+++|+.|+.++++++ .+...
T Consensus 65 ~d~~------~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~ 138 (287)
T PRK06194 65 SDAA------QVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPA 138 (287)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCC
Confidence 9875 6666655 47999999997643 1 334557899999999977774 33211
Q ss_pred -CceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cC
Q psy7538 166 -LKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LG 243 (543)
Q Consensus 166 -l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~ 243 (543)
..++|++||..+..... ..+.|+.||+..|.+++.+.. .+
T Consensus 139 ~~g~iv~~sS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~l~~e~~ 180 (287)
T PRK06194 139 YEGHIVNTASMAGLLAPP--------------------------------------AMGIYNVSKHAVVSLTETLYQDLS 180 (287)
T ss_pred CCeEEEEeCChhhccCCC--------------------------------------CCcchHHHHHHHHHHHHHHHHHHh
Confidence 25899999986653211 016899999999999987665 22
Q ss_pred CcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHH
Q psy7538 244 MPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGV 307 (543)
Q Consensus 244 lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~ 307 (543)
.+...+|...|. ||+++.. +.....+....+.+++.+.+++++++|++.++
T Consensus 181 ~~~~~irv~~v~-------pg~i~t~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (287)
T PRK06194 181 LVTDQVGASVLC-------PYFVPTG------IWQSERNRPADLANTAPPTRSQLIAQAMSQKA 231 (287)
T ss_pred hcCCCeEEEEEE-------eCcccCc------cccccccCchhcccCccccchhhHHHHHHHhh
Confidence 222333433221 1333221 11111222334456777888888888887654
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=6.8e-16 Score=151.75 Aligned_cols=222 Identities=13% Similarity=0.123 Sum_probs=148.0
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEE-EecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYL-LMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~-l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
+.+++++||||||+||++++++|++.|+ +|.+ +.|.... .+.+. +.++ ....++.++.+|
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~---~v~~~~~r~~~~---~~~~~--------~~~~-----~~~~~~~~~~~D 62 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEGY---DIAVNYARSRKA---AEETA--------EEIE-----ALGRKALAVKAN 62 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEcCCCHHH---HHHHH--------HHHH-----hcCCeEEEEEcC
Confidence 3578999999999999999999999987 5544 4565321 11111 1111 112468889999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceE
Q psy7538 107 ITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCF 169 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~ 169 (543)
+++++ ++..+++ .+|+|||+|+.... .+.+...+++|+.|+.++++++... .+.++|
T Consensus 63 ~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~i 136 (250)
T PRK08063 63 VGDVE------KIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKI 136 (250)
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEE
Confidence 99875 5665554 58999999986432 1233456889999999999888753 245699
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+..... + ...|+.+|+..|.+++..+. .+++
T Consensus 137 v~~sS~~~~~~~~---------~-----------------------------~~~y~~sK~a~~~~~~~~~~~~~~~~i~ 178 (250)
T PRK08063 137 ISLSSLGSIRYLE---------N-----------------------------YTTVGVSKAALEALTRYLAVELAPKGIA 178 (250)
T ss_pred EEEcchhhccCCC---------C-----------------------------ccHHHHHHHHHHHHHHHHHHHHhHhCeE
Confidence 9999974432110 0 16899999999999987654 5899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
+.+++|+.|..+.....+++ ..+........ ....+++.+|+|++++.++.+... ...++.
T Consensus 179 v~~i~pg~v~t~~~~~~~~~-------~~~~~~~~~~~---------~~~~~~~~~dva~~~~~~~~~~~~---~~~g~~ 239 (250)
T PRK08063 179 VNAVSGGAVDTDALKHFPNR-------EELLEDARAKT---------PAGRMVEPEDVANAVLFLCSPEAD---MIRGQT 239 (250)
T ss_pred EEeEecCcccCchhhhccCc-------hHHHHHHhcCC---------CCCCCcCHHHHHHHHHHHcCchhc---CccCCE
Confidence 99999999976543222211 11221111110 112478999999999988865432 124778
Q ss_pred EEeecC
Q psy7538 326 CNLTSN 331 (543)
Q Consensus 326 yni~s~ 331 (543)
+++.++
T Consensus 240 ~~~~gg 245 (250)
T PRK08063 240 IIVDGG 245 (250)
T ss_pred EEECCC
Confidence 888776
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.3e-15 Score=149.04 Aligned_cols=221 Identities=14% Similarity=0.171 Sum_probs=146.9
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||||++|++++++|++.|+ +|+++.|+.... .+.+. +.++ ....++.++.+|+
T Consensus 3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~---~v~~~~~~~~~~--~~~~~--------~~~~-----~~~~~~~~~~~Dl 64 (248)
T PRK05557 3 LEGKVALVTGASRGIGRAIAERLAAQGA---NVVINYASSEAG--AEALV--------AEIG-----ALGGKALAVQGDV 64 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCchhH--HHHHH--------HHHH-----hcCCceEEEEcCC
Confidence 3678999999999999999999999987 777787764211 11111 1111 1124688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ ++..+++ ++|+|||+|+.... .+.+...+++|+.++.++++++... .+.++||
T Consensus 65 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v 138 (248)
T PRK05557 65 SDAE------SVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRII 138 (248)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEE
Confidence 9875 4554443 68999999987532 1334567889999999999888753 2456899
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... ....|+.+|...|.+++..+. .++++
T Consensus 139 ~iss~~~~~~~~--------------------------------------~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~ 180 (248)
T PRK05557 139 NISSVVGLMGNP--------------------------------------GQANYAASKAGVIGFTKSLARELASRGITV 180 (248)
T ss_pred EEcccccCcCCC--------------------------------------CCchhHHHHHHHHHHHHHHHHHhhhhCeEE
Confidence 999974432211 016899999999988876543 48999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
+++||+.+.++...+. ..........+. ....+++++|+++++..++..... ...+++|
T Consensus 181 ~~v~pg~~~~~~~~~~---------~~~~~~~~~~~~---------~~~~~~~~~~va~~~~~l~~~~~~---~~~g~~~ 239 (248)
T PRK05557 181 NAVAPGFIETDMTDAL---------PEDVKEAILAQI---------PLGRLGQPEEIASAVAFLASDEAA---YITGQTL 239 (248)
T ss_pred EEEecCccCCcccccc---------ChHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCcccC---CccccEE
Confidence 9999987754432211 111222211111 112357889999998877755221 1357899
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
+++++
T Consensus 240 ~i~~~ 244 (248)
T PRK05557 240 HVNGG 244 (248)
T ss_pred EecCC
Confidence 99765
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.2e-16 Score=159.63 Aligned_cols=160 Identities=18% Similarity=0.237 Sum_probs=118.4
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
++|+|+||||||+||++++++|++.|+ +|+++.|.. ++++++. . .++.++.+|++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~---~V~~~~r~~------~~l~~~~-------------~---~~~~~~~~Dv~ 56 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY---TVYGAARRV------DKMEDLA-------------S---LGVHPLSLDVT 56 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHH-------------h---CCCeEEEeeCC
Confidence 578999999999999999999999987 788888864 2333221 1 24778999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHH----HHHHHHhccCCceEE
Q psy7538 109 QLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRD----MLELSKQMKNLKCFT 170 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~----ll~~a~~~~~l~~~V 170 (543)
+++ +++.+++ ++|+|||+|+.... .+.++..+++|+.|+.. +++.+++. +..++|
T Consensus 57 ~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-~~g~iv 129 (273)
T PRK06182 57 DEA------SIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQ-RSGRII 129 (273)
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhc-CCCEEE
Confidence 875 6666654 68999999997542 13456688999998544 44555554 567999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+.... | ....|+.||+..+.+.+..+. .++++
T Consensus 130 ~isS~~~~~~~----------~----------------------------~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v 171 (273)
T PRK06182 130 NISSMGGKIYT----------P----------------------------LGAWYHATKFALEGFSDALRLEVAPFGIDV 171 (273)
T ss_pred EEcchhhcCCC----------C----------------------------CccHhHHHHHHHHHHHHHHHHHhcccCCEE
Confidence 99997543211 0 115799999999998765442 58999
Q ss_pred EEEecCeeeecC
Q psy7538 247 MILRPSIVVPIY 258 (543)
Q Consensus 247 ~IlRps~V~G~~ 258 (543)
.++||+.|.++.
T Consensus 172 ~~v~Pg~v~t~~ 183 (273)
T PRK06182 172 VVIEPGGIKTEW 183 (273)
T ss_pred EEEecCCccccc
Confidence 999999997653
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.5e-16 Score=154.41 Aligned_cols=160 Identities=16% Similarity=0.201 Sum_probs=123.1
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
++++|+||||||+||++++++|++.|+ +|+++.|+.... ....+++++.+|++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~---~V~~~~r~~~~~------------------------~~~~~~~~~~~D~~ 55 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGY---RVFGTSRNPARA------------------------APIPGVELLELDVT 55 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC---EEEEEeCChhhc------------------------cccCCCeeEEeecC
Confidence 467999999999999999999999986 788999875321 11246788999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHH----HhccCCceEE
Q psy7538 109 QLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELS----KQMKNLKCFT 170 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~l~~~V 170 (543)
+++ +++.+++ .+|+|||+||.... .+..+..+++|+.|+.++++.+ ++. +.+++|
T Consensus 56 d~~------~~~~~~~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~iv 128 (270)
T PRK06179 56 DDA------SVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQ-GSGRII 128 (270)
T ss_pred CHH------HHHHHHHHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEE
Confidence 876 6666665 47999999997542 1345678999999999998885 333 678999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+.... |. ...|+.||+..|.++...+. .|+++
T Consensus 129 ~isS~~~~~~~----------~~----------------------------~~~Y~~sK~a~~~~~~~l~~el~~~gi~v 170 (270)
T PRK06179 129 NISSVLGFLPA----------PY----------------------------MALYAASKHAVEGYSESLDHEVRQFGIRV 170 (270)
T ss_pred EECCccccCCC----------CC----------------------------ccHHHHHHHHHHHHHHHHHHHHhhhCcEE
Confidence 99998654321 11 16899999999998877543 58999
Q ss_pred EEEecCeeeecCCC
Q psy7538 247 MILRPSIVVPIYKE 260 (543)
Q Consensus 247 ~IlRps~V~G~~~~ 260 (543)
++++|+.+.++...
T Consensus 171 ~~v~pg~~~t~~~~ 184 (270)
T PRK06179 171 SLVEPAYTKTNFDA 184 (270)
T ss_pred EEEeCCCccccccc
Confidence 99999998776543
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=6.7e-16 Score=152.70 Aligned_cols=226 Identities=13% Similarity=0.140 Sum_probs=151.6
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++|++++||||||+||++++++|++.|. +|.++.|+.... +..++ ++ ....++.++.+|+
T Consensus 5 l~~~~ilItGasggiG~~la~~l~~~G~---~v~~~~r~~~~~---~~~~~---------~~-----~~~~~~~~~~~D~ 64 (258)
T PRK08628 5 LKDKVVIVTGGASGIGAAISLRLAEEGA---IPVIFGRSAPDD---EFAEE---------LR-----ALQPRAEFVQVDL 64 (258)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHcCC---cEEEEcCChhhH---HHHHH---------HH-----hcCCceEEEEccC
Confidence 5689999999999999999999999986 677888875321 11111 11 1224688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCC---Cc---ccHHHHHHHHHHHHHHHHHHHHhc--cCCceEEEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIR---FD---EPIKTAVILNTRGTRDMLELSKQM--KNLKCFTYI 172 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~---~~---~~~~~~~~~Nv~gt~~ll~~a~~~--~~l~~~V~v 172 (543)
++++ ++..+++ .+|+|||+|+... ++ +.++..+++|+.++.++.+.+... .+..+||++
T Consensus 65 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ 138 (258)
T PRK08628 65 TDDA------QCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNI 138 (258)
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEE
Confidence 9875 5555553 5899999999532 12 446678999999999998887642 133689999
Q ss_pred ecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEE
Q psy7538 173 STAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMI 248 (543)
Q Consensus 173 ST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~I 248 (543)
||..+..... ....|+.||+..|.+++..+. .++++..
T Consensus 139 ss~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~ 180 (258)
T PRK08628 139 SSKTALTGQG--------------------------------------GTSGYAAAKGAQLALTREWAVALAKDGVRVNA 180 (258)
T ss_pred CCHHhccCCC--------------------------------------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEE
Confidence 9975532110 016899999999999987654 5899999
Q ss_pred EecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEe
Q psy7538 249 LRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNL 328 (543)
Q Consensus 249 lRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni 328 (543)
++|+.|+++...+ |......+........+.. + ....++..+|+|++++.++..... ...+..+.+
T Consensus 181 v~pg~v~t~~~~~---~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~~dva~~~~~l~~~~~~---~~~g~~~~~ 246 (258)
T PRK08628 181 VIPAEVMTPLYEN---WIATFDDPEAKLAAITAKI----P----LGHRMTTAEEIADTAVFLLSERSS---HTTGQWLFV 246 (258)
T ss_pred EecCccCCHHHHH---HhhhccCHHHHHHHHHhcC----C----ccccCCCHHHHHHHHHHHhChhhc---cccCceEEe
Confidence 9999998874321 2222211211111111111 0 012467889999999988866532 124667777
Q ss_pred ecC
Q psy7538 329 TSN 331 (543)
Q Consensus 329 ~s~ 331 (543)
.++
T Consensus 247 ~gg 249 (258)
T PRK08628 247 DGG 249 (258)
T ss_pred cCC
Confidence 554
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.7e-16 Score=152.18 Aligned_cols=210 Identities=12% Similarity=0.132 Sum_probs=146.4
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||||+||++++++|++.|+ +|+++.|+.... .+.++++ . ...+..+.+|+
T Consensus 5 ~~~k~vlItGatg~iG~~la~~l~~~G~---~v~~~~r~~~~~--~~~~~~~--------------~--~~~~~~~~~D~ 63 (239)
T PRK12828 5 LQGKVVAITGGFGGLGRATAAWLAARGA---RVALIGRGAAPL--SQTLPGV--------------P--ADALRIGGIDL 63 (239)
T ss_pred CCCCEEEEECCCCcHhHHHHHHHHHCCC---eEEEEeCChHhH--HHHHHHH--------------h--hcCceEEEeec
Confidence 4689999999999999999999999986 789999965321 1112111 1 12456778999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
.+.+ +++.+++ ++|+|||+|+.... .+.+...+++|+.++.++++++.+. .+.+++|
T Consensus 64 ~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv 137 (239)
T PRK12828 64 VDPQ------AARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIV 137 (239)
T ss_pred CCHH------HHHHHHHHHHHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEE
Confidence 9865 5555544 58999999986432 2334567889999999999887531 2578999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... +. ..|+.+|+..+.++...+. .++++
T Consensus 138 ~~sS~~~~~~~~---------~~-----------------------------~~y~~sk~a~~~~~~~~a~~~~~~~i~~ 179 (239)
T PRK12828 138 NIGAGAALKAGP---------GM-----------------------------GAYAAAKAGVARLTEALAAELLDRGITV 179 (239)
T ss_pred EECchHhccCCC---------Cc-----------------------------chhHHHHHHHHHHHHHHHHHhhhcCeEE
Confidence 999985543211 00 5799999988888876554 48999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
.++||+.|+++.... .. + ......+++++|+|+++..++..... . ..++.+
T Consensus 180 ~~i~pg~v~~~~~~~--------~~----------------~--~~~~~~~~~~~dva~~~~~~l~~~~~-~--~~g~~~ 230 (239)
T PRK12828 180 NAVLPSIIDTPPNRA--------DM----------------P--DADFSRWVTPEQIAAVIAFLLSDEAQ-A--ITGASI 230 (239)
T ss_pred EEEecCcccCcchhh--------cC----------------C--chhhhcCCCHHHHHHHHHHHhCcccc-c--ccceEE
Confidence 999999988763211 00 0 00112379999999999888875432 1 247788
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
++.++
T Consensus 231 ~~~g~ 235 (239)
T PRK12828 231 PVDGG 235 (239)
T ss_pred EecCC
Confidence 88776
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.7e-16 Score=153.04 Aligned_cols=230 Identities=14% Similarity=0.149 Sum_probs=151.2
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
|+.+|+||||||||+||++++++|+++|+ +|.++.|+.. +++++ .+.+. ....++..+.+|
T Consensus 2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~---~V~~~~r~~~------~~~~~-----~~~~~-----~~~~~~~~~~~D 62 (258)
T PRK07890 2 LLKGKVVVVSGVGPGLGRTLAVRAARAGA---DVVLAARTAE------RLDEV-----AAEID-----DLGRRALAVPTD 62 (258)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCC---EEEEEeCCHH------HHHHH-----HHHHH-----HhCCceEEEecC
Confidence 56789999999999999999999999987 7888888642 12211 11111 112467899999
Q ss_pred CCCCCCCCCHHHHHHHh-------cCccEEEEcCccCCC--------cccHHHHHHHHHHHHHHHHHHHHhc--cCCceE
Q psy7538 107 ITQLKLGISEIDKKELI-------DNVDIVYHVAATIRF--------DEPIKTAVILNTRGTRDMLELSKQM--KNLKCF 169 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~l~~~ 169 (543)
+++++ +++.++ .++|+|||+|+.... .+.+...+++|+.|+..+++++... +...++
T Consensus 63 ~~~~~------~~~~~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i 136 (258)
T PRK07890 63 ITDED------QCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSI 136 (258)
T ss_pred CCCHH------HHHHHHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEE
Confidence 99875 555444 358999999986421 1445668999999999999998752 122589
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+..... ..+.|+.+|...|.+++..+. .+++
T Consensus 137 i~~sS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~ 178 (258)
T PRK07890 137 VMINSMVLRHSQP--------------------------------------KYGAYKMAKGALLAASQSLATELGPQGIR 178 (258)
T ss_pred EEEechhhccCCC--------------------------------------CcchhHHHHHHHHHHHHHHHHHHhhcCcE
Confidence 9999985532111 016899999999999987764 4899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCc--hHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCC
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNING--PTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERK 323 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g--~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~ 323 (543)
+.++||+.|+++...+.-.+.....+ ...+.....+. .....+.+++|++++++.++..... ...+
T Consensus 179 v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dva~a~~~l~~~~~~---~~~G 246 (258)
T PRK07890 179 VNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAAN---------SDLKRLPTDDEVASAVLFLASDLAR---AITG 246 (258)
T ss_pred EEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhc---------CCccccCCHHHHHHHHHHHcCHhhh---CccC
Confidence 99999999988753221100000000 01111111111 1123467899999999888765322 1246
Q ss_pred cEEEeecC
Q psy7538 324 SVCNLTSN 331 (543)
Q Consensus 324 ~vyni~s~ 331 (543)
+++.+..+
T Consensus 247 ~~i~~~gg 254 (258)
T PRK07890 247 QTLDVNCG 254 (258)
T ss_pred cEEEeCCc
Confidence 66666554
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=2e-15 Score=148.07 Aligned_cols=221 Identities=14% Similarity=0.129 Sum_probs=148.7
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|+||+++++.|++.|+ +|.++.|..... .+.++++ .+.+ .....++.++.+|+
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~g~---~v~~~~~~~~~~--~~~~~~~-----~~~~-----~~~~~~~~~~~~Dl 68 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAADGA---DVIVLDIHPMRG--RAEADAV-----AAGI-----EAAGGKALGLAFDV 68 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCC---eEEEEcCccccc--HHHHHHH-----HHHH-----HhcCCcEEEEEccC
Confidence 4679999999999999999999999987 677776643221 1222221 1111 11234688999999
Q ss_pred CCCCCCCCHHHHHHHh-------cCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHH-----hccCCce
Q psy7538 108 TQLKLGISEIDKKELI-------DNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSK-----QMKNLKC 168 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~-----~~~~l~~ 168 (543)
++++ +++.++ .++|+|||+|+.... .+.+...+++|+.|+.++++++. +. +.++
T Consensus 69 ~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~ 141 (249)
T PRK12827 69 RDFA------ATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRAR-RGGR 141 (249)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-CCeE
Confidence 9875 555554 358999999997541 13356678999999999999998 33 5678
Q ss_pred EEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCC
Q psy7538 169 FTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGM 244 (543)
Q Consensus 169 ~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~l 244 (543)
+|++||..+..... + ...|+.+|+..+.+++..+. .++
T Consensus 142 iv~~sS~~~~~~~~---------~-----------------------------~~~y~~sK~a~~~~~~~l~~~~~~~~i 183 (249)
T PRK12827 142 IVNIASVAGVRGNR---------G-----------------------------QVNYAASKAGLIGLTKTLANELAPRGI 183 (249)
T ss_pred EEEECCchhcCCCC---------C-----------------------------CchhHHHHHHHHHHHHHHHHHhhhhCc
Confidence 99999975532211 0 16899999999888876654 489
Q ss_pred cEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCc
Q psy7538 245 PCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKS 324 (543)
Q Consensus 245 p~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~ 324 (543)
+++++||+.|.++..... .+. ....+.. ....+.+++|++++++.++..... ...++
T Consensus 184 ~~~~i~pg~v~t~~~~~~--------~~~---~~~~~~~---------~~~~~~~~~~va~~~~~l~~~~~~---~~~g~ 240 (249)
T PRK12827 184 TVNAVAPGAINTPMADNA--------APT---EHLLNPV---------PVQRLGEPDEVAALVAFLVSDAAS---YVTGQ 240 (249)
T ss_pred EEEEEEECCcCCCccccc--------chH---HHHHhhC---------CCcCCcCHHHHHHHHHHHcCcccC---CccCc
Confidence 999999999988744221 011 1111110 112245889999998887754322 12467
Q ss_pred EEEeecC
Q psy7538 325 VCNLTSN 331 (543)
Q Consensus 325 vyni~s~ 331 (543)
.+++.++
T Consensus 241 ~~~~~~g 247 (249)
T PRK12827 241 VIPVDGG 247 (249)
T ss_pred EEEeCCC
Confidence 8888765
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=99.70 E-value=9.5e-17 Score=156.51 Aligned_cols=225 Identities=17% Similarity=0.213 Sum_probs=153.9
Q ss_pred EEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCCCC
Q psy7538 33 IFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQLKL 112 (543)
Q Consensus 33 VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~~l 112 (543)
|+||||||.+|+.+++.|++.++ +|.+++|+.+ .++.+++ + ...++++.+|+.+++
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~---~V~~l~R~~~----~~~~~~l---------~-------~~g~~vv~~d~~~~~- 56 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF---SVRALVRDPS----SDRAQQL---------Q-------ALGAEVVEADYDDPE- 56 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG---CEEEEESSSH----HHHHHHH---------H-------HTTTEEEES-TT-HH-
T ss_pred CEEECCccHHHHHHHHHHHhCCC---CcEEEEeccc----hhhhhhh---------h-------cccceEeecccCCHH-
Confidence 79999999999999999999765 7999999872 1222221 1 135678899999765
Q ss_pred CCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCcccccccCCC
Q psy7538 113 GISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPP 192 (543)
Q Consensus 113 gls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i~E~~y~~p 192 (543)
.+.++++++|+||.+-+... ... +....+++++|++. ++++||+.|..........
T Consensus 57 -----~l~~al~g~d~v~~~~~~~~-~~~--------~~~~~~li~Aa~~a-gVk~~v~ss~~~~~~~~~~--------- 112 (233)
T PF05368_consen 57 -----SLVAALKGVDAVFSVTPPSH-PSE--------LEQQKNLIDAAKAA-GVKHFVPSSFGADYDESSG--------- 112 (233)
T ss_dssp -----HHHHHHTTCSEEEEESSCSC-CCH--------HHHHHHHHHHHHHH-T-SEEEESEESSGTTTTTT---------
T ss_pred -----HHHHHHcCCceEEeecCcch-hhh--------hhhhhhHHHhhhcc-ccceEEEEEeccccccccc---------
Confidence 89999999999998877554 111 23457899999998 7999997554433321100
Q ss_pred CChHHHHHHHhhcchhhhhhhhhhccCCCC-chHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCCCCCCCCCc
Q psy7538 193 DDPHQVILRAESMKEEDLEVFRQDILGEFP-NSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPGWTDNING 271 (543)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p-n~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~gw~d~~~g 271 (543)
.+| ...-..|...|+.+++. +++++++||++-+...-.+..++.
T Consensus 113 ---------------------------~~p~~~~~~~k~~ie~~l~~~---~i~~t~i~~g~f~e~~~~~~~~~~----- 157 (233)
T PF05368_consen 113 ---------------------------SEPEIPHFDQKAEIEEYLRES---GIPYTIIRPGFFMENLLPPFAPVV----- 157 (233)
T ss_dssp ---------------------------STTHHHHHHHHHHHHHHHHHC---TSEBEEEEE-EEHHHHHTTTHHTT-----
T ss_pred ---------------------------ccccchhhhhhhhhhhhhhhc---cccceeccccchhhhhhhhhcccc-----
Confidence 011 23445788889888777 899999999976554322211110
Q ss_pred hHHHHHHHhcC-ceeEEeecCCcccccc-hHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHHHHHhhhh
Q psy7538 272 PTGLLIGAGKG-VIRSMYCKNTGMADFL-PADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEICDIGKDIV 349 (543)
Q Consensus 272 ~~~~~~~~~~g-~~~~~~~~~~~~~d~V-~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~~~i~~~~ 349 (543)
..... ....+.++++....++ ..+|+++++..++..+.. . ..++.+++++ +.+|+.|+++.+.+.+
T Consensus 158 ------~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~-~--~~~~~~~~~~---~~~t~~eia~~~s~~~ 225 (233)
T PF05368_consen 158 ------DIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEK-H--NNGKTIFLAG---ETLTYNEIAAILSKVL 225 (233)
T ss_dssp ------CSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGG-T--TEEEEEEEGG---GEEEHHHHHHHHHHHH
T ss_pred ------cccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHH-h--cCCEEEEeCC---CCCCHHHHHHHHHHHH
Confidence 01111 1345677777777775 999999999999988654 1 1356777765 5799999999999999
Q ss_pred cCc
Q psy7538 350 TSK 352 (543)
Q Consensus 350 G~~ 352 (543)
|++
T Consensus 226 G~~ 228 (233)
T PF05368_consen 226 GKK 228 (233)
T ss_dssp TSE
T ss_pred CCc
Confidence 765
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=6.9e-16 Score=151.65 Aligned_cols=223 Identities=11% Similarity=0.076 Sum_probs=149.4
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++++|+||||||+||++++++|++.|+ +|+++.|+... ++++ .+.+. . ..++.++.+|+
T Consensus 3 ~~~~~vlItGasg~iG~~l~~~l~~~G~---~V~~~~r~~~~------~~~~-----~~~~~-----~-~~~~~~~~~D~ 62 (251)
T PRK07231 3 LEGKVAIVTGASSGIGEGIARRFAAEGA---RVVVTDRNEEA------AERV-----AAEIL-----A-GGRAIAVAADV 62 (251)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHHH------HHHH-----HHHHh-----c-CCeEEEEECCC
Confidence 5789999999999999999999999987 78999998632 1111 11111 1 24688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC--------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF--------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~ 169 (543)
++++ +++.+++ .+|+|||+|+.... .+.++..+++|+.|+.++++.+... .+.++|
T Consensus 63 ~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~i 136 (251)
T PRK07231 63 SDEA------DVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAI 136 (251)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEE
Confidence 9876 6665554 57999999986432 1335668999999988887776542 256899
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+...... ...|+.+|+..+.+++..+. .+++
T Consensus 137 v~~sS~~~~~~~~~--------------------------------------~~~y~~sk~~~~~~~~~~a~~~~~~~i~ 178 (251)
T PRK07231 137 VNVASTAGLRPRPG--------------------------------------LGWYNASKGAVITLTKALAAELGPDKIR 178 (251)
T ss_pred EEEcChhhcCCCCC--------------------------------------chHHHHHHHHHHHHHHHHHHHhhhhCeE
Confidence 99999866432110 16799999999888877654 4899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
+..++|+.+.++...... .. ..+ ........ ......+++++|+|.+++.++..... ...+..
T Consensus 179 v~~i~pg~~~t~~~~~~~---~~-~~~-~~~~~~~~---------~~~~~~~~~~~dva~~~~~l~~~~~~---~~~g~~ 241 (251)
T PRK07231 179 VNAVAPVVVETGLLEAFM---GE-PTP-ENRAKFLA---------TIPLGRLGTPEDIANAALFLASDEAS---WITGVT 241 (251)
T ss_pred EEEEEECccCCCcchhhh---cc-cCh-HHHHHHhc---------CCCCCCCcCHHHHHHHHHHHhCcccc---CCCCCe
Confidence 999999988554322110 00 000 11111111 11233578999999999998865432 124667
Q ss_pred EEeecC
Q psy7538 326 CNLTSN 331 (543)
Q Consensus 326 yni~s~ 331 (543)
+.+.++
T Consensus 242 ~~~~gg 247 (251)
T PRK07231 242 LVVDGG 247 (251)
T ss_pred EEECCC
Confidence 777655
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=9.3e-16 Score=148.36 Aligned_cols=203 Identities=14% Similarity=0.159 Sum_probs=136.9
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+|+++||||+|++|++++++|+++ + +|+++.|+... .+.+.+ ....++++.+|+++
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~---~V~~~~r~~~~---~~~~~~-----------------~~~~~~~~~~D~~~ 58 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-H---TLLLGGRPAER---LDELAA-----------------ELPGATPFPVDLTD 58 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-C---CEEEEeCCHHH---HHHHHH-----------------HhccceEEecCCCC
Confidence 579999999999999999999988 5 78999997421 111110 01257789999998
Q ss_pred CCCCCCHHHHHHHhc---CccEEEEcCccCCCc-------ccHHHHHHHHHHHH----HHHHHHHHhccCCceEEEEecC
Q psy7538 110 LKLGISEIDKKELID---NVDIVYHVAATIRFD-------EPIKTAVILNTRGT----RDMLELSKQMKNLKCFTYISTA 175 (543)
Q Consensus 110 ~~lgls~~~~~~l~~---~vd~ViH~AA~v~~~-------~~~~~~~~~Nv~gt----~~ll~~a~~~~~l~~~V~vST~ 175 (543)
++ +++.+++ ++|+|||+|+..... +.+...+++|+.+. +++++.+++. .+++|++||.
T Consensus 59 ~~------~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~v~~ss~ 130 (227)
T PRK08219 59 PE------AIAAAVEQLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA--HGHVVFINSG 130 (227)
T ss_pred HH------HHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCeEEEEcch
Confidence 75 6777776 599999999875321 23455688999984 4455545443 3689999998
Q ss_pred ccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh--cC-CcEEEEecC
Q psy7538 176 YCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME--LG-MPCMILRPS 252 (543)
Q Consensus 176 y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~--~~-lp~~IlRps 252 (543)
.+..... ....|+.+|...|.++..... .+ +++..++|+
T Consensus 131 ~~~~~~~--------------------------------------~~~~y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg 172 (227)
T PRK08219 131 AGLRANP--------------------------------------GWGSYAASKFALRALADALREEEPGNVRVTSVHPG 172 (227)
T ss_pred HhcCcCC--------------------------------------CCchHHHHHHHHHHHHHHHHHHhcCCceEEEEecC
Confidence 6543211 015799999999988877654 34 788888887
Q ss_pred eeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeec
Q psy7538 253 IVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTS 330 (543)
Q Consensus 253 ~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s 330 (543)
.+.++... .+... .+. ......+++++|++++++.++..... +.+|++.-
T Consensus 173 ~~~~~~~~-------------~~~~~--~~~-------~~~~~~~~~~~dva~~~~~~l~~~~~------~~~~~~~~ 222 (227)
T PRK08219 173 RTDTDMQR-------------GLVAQ--EGG-------EYDPERYLRPETVAKAVRFAVDAPPD------AHITEVVV 222 (227)
T ss_pred CccchHhh-------------hhhhh--hcc-------ccCCCCCCCHHHHHHHHHHHHcCCCC------CccceEEE
Confidence 55332110 01100 010 11234679999999999999876543 66777754
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.9e-16 Score=153.15 Aligned_cols=226 Identities=12% Similarity=0.057 Sum_probs=147.3
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+|+|+||||+|+||+++++.|++.|+ +|.++.|+... ++++ .+.++... ...++.++.+|+++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~---~vi~~~r~~~~------~~~~-----~~~~~~~~---~~~~~~~~~~D~~~ 64 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY---RVAVADINSEK------AANV-----AQEINAEY---GEGMAYGFGADATS 64 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEECCHHH------HHHH-----HHHHHHhc---CCceeEEEEccCCC
Confidence 67999999999999999999999986 78888886432 1111 11111111 11368899999998
Q ss_pred CCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cC-CceEEE
Q psy7538 110 LKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KN-LKCFTY 171 (543)
Q Consensus 110 ~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~-l~~~V~ 171 (543)
++ ++..+++ .+|+|||+|+.... .+.++..+++|+.|+..+++.+... ++ -.++|+
T Consensus 65 ~~------~i~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~ 138 (259)
T PRK12384 65 EQ------SVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQ 138 (259)
T ss_pred HH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEE
Confidence 65 4554443 57999999986532 1345667899999998888777542 23 358999
Q ss_pred EecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEE
Q psy7538 172 ISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCM 247 (543)
Q Consensus 172 vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~ 247 (543)
+||..+.... +. ...|+.||+..+.+++.... +|+++.
T Consensus 139 ~ss~~~~~~~----------~~----------------------------~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~ 180 (259)
T PRK12384 139 INSKSGKVGS----------KH----------------------------NSGYSAAKFGGVGLTQSLALDLAEYGITVH 180 (259)
T ss_pred ecCcccccCC----------CC----------------------------CchhHHHHHHHHHHHHHHHHHHHHcCcEEE
Confidence 9996432110 00 16899999998888777653 689999
Q ss_pred EEecCeeeecCCCCCCCCCCCCCchHHHHHHHh--cCc----eeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCC
Q psy7538 248 ILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAG--KGV----IRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESE 321 (543)
Q Consensus 248 IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~--~g~----~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~ 321 (543)
++||+.++++.... .++.... .+. ......++.....+++++|++++++.++..... ..
T Consensus 181 ~v~pg~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~~~~~~---~~ 245 (259)
T PRK12384 181 SLMLGNLLKSPMFQ------------SLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYASPKAS---YC 245 (259)
T ss_pred EEecCCcccchhhh------------hhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHHHHHHcCcccc---cc
Confidence 99999887653210 0111100 000 000112233446788999999999877654321 12
Q ss_pred CCcEEEeecC
Q psy7538 322 RKSVCNLTSN 331 (543)
Q Consensus 322 ~~~vyni~s~ 331 (543)
.+++|++.++
T Consensus 246 ~G~~~~v~~g 255 (259)
T PRK12384 246 TGQSINVTGG 255 (259)
T ss_pred cCceEEEcCC
Confidence 5789999887
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.9e-15 Score=149.20 Aligned_cols=228 Identities=17% Similarity=0.165 Sum_probs=145.1
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
++++|+|+||||||+||++++++|++.|+ +|.++.|+... +++. .+.++.. .....+.++.+|
T Consensus 1 ~~~~k~vlItGas~giG~~~a~~l~~~g~---~v~~~~r~~~~------~~~~-----~~~l~~~---~~~~~~~~~~~D 63 (256)
T PRK09186 1 MLKGKTILITGAGGLIGSALVKAILEAGG---IVIAADIDKEA------LNEL-----LESLGKE---FKSKKLSLVELD 63 (256)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEecChHH------HHHH-----HHHHHhh---cCCCceeEEEec
Confidence 35789999999999999999999999987 78888886432 1111 1111111 112356778999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CccEEEEcCccCC------C----cccHHHHHHHHHHHHHHHHHHHHhc---cCC
Q psy7538 107 ITQLKLGISEIDKKELID-------NVDIVYHVAATIR------F----DEPIKTAVILNTRGTRDMLELSKQM---KNL 166 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~------~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l 166 (543)
+++++ ++..+++ .+|+|||+|+... + .+.+...+++|+.++..+++++... .+.
T Consensus 64 l~d~~------~~~~~~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 137 (256)
T PRK09186 64 ITDQE------SLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGG 137 (256)
T ss_pred CCCHH------HHHHHHHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCC
Confidence 99876 5665554 3899999997431 1 1335567889998887776665431 256
Q ss_pred ceEEEEecCccccCCC-cccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----
Q psy7538 167 KCFTYISTAYCHPSEK-VLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME---- 241 (543)
Q Consensus 167 ~~~V~vST~y~~~~~~-~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~---- 241 (543)
+++|++||.++..... .+.|.. +. ..+..|+.||+..|.+.+..+.
T Consensus 138 ~~iv~~sS~~~~~~~~~~~~~~~---~~--------------------------~~~~~Y~~sK~a~~~l~~~la~e~~~ 188 (256)
T PRK09186 138 GNLVNISSIYGVVAPKFEIYEGT---SM--------------------------TSPVEYAAIKAGIIHLTKYLAKYFKD 188 (256)
T ss_pred ceEEEEechhhhccccchhcccc---cc--------------------------CCcchhHHHHHHHHHHHHHHHHHhCc
Confidence 7999999986643211 111110 00 1124799999999988865544
Q ss_pred cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCC
Q psy7538 242 LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESE 321 (543)
Q Consensus 242 ~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~ 321 (543)
.++.+++++|+.+.... +..+....... .....+++++|+|++++.++..... . .
T Consensus 189 ~~i~v~~i~Pg~~~~~~-------------~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~-~--~ 243 (256)
T PRK09186 189 SNIRVNCVSPGGILDNQ-------------PEAFLNAYKKC---------CNGKGMLDPDDICGTLVFLLSDQSK-Y--I 243 (256)
T ss_pred CCeEEEEEecccccCCC-------------CHHHHHHHHhc---------CCccCCCCHHHhhhhHhheeccccc-c--c
Confidence 57999999999775431 11122211111 0123478999999999998865432 1 2
Q ss_pred CCcEEEeecC
Q psy7538 322 RKSVCNLTSN 331 (543)
Q Consensus 322 ~~~vyni~s~ 331 (543)
.+.++++.++
T Consensus 244 ~g~~~~~~~g 253 (256)
T PRK09186 244 TGQNIIVDDG 253 (256)
T ss_pred cCceEEecCC
Confidence 4667776655
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.5e-15 Score=150.62 Aligned_cols=204 Identities=14% Similarity=0.174 Sum_probs=139.1
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+++|+||||+|+||++++++|++.|+ +|.++.|+... .+.+. +.++ ....++.++.+|+++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~---~Vi~~~r~~~~---~~~~~--------~~l~-----~~~~~~~~~~~Dl~~ 61 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGA---QLVLAARNETR---LASLA--------QELA-----DHGGEALVVPTDVSD 61 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH--------HHHH-----hcCCcEEEEEccCCC
Confidence 57899999999999999999999986 78888886421 11111 1111 122468889999998
Q ss_pred CCCCCCHHHHHHHhc-------CccEEEEcCccCCCc--------ccHHHHHHHHHHHHHHHHHHHHhc--cCCceEEEE
Q psy7538 110 LKLGISEIDKKELID-------NVDIVYHVAATIRFD--------EPIKTAVILNTRGTRDMLELSKQM--KNLKCFTYI 172 (543)
Q Consensus 110 ~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~~--------~~~~~~~~~Nv~gt~~ll~~a~~~--~~l~~~V~v 172 (543)
++ .+..+++ ++|+|||+|+..... +.+...+++|+.|+.++++.+... .+..++|++
T Consensus 62 ~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~ 135 (263)
T PRK06181 62 AE------ACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVV 135 (263)
T ss_pred HH------HHHHHHHHHHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEE
Confidence 75 5555544 689999999865421 224557999999999999998642 234789999
Q ss_pred ecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEE
Q psy7538 173 STAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMI 248 (543)
Q Consensus 173 ST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~I 248 (543)
||..+..... + ...|+.+|+..|.+.+.... .++++.+
T Consensus 136 sS~~~~~~~~---------~-----------------------------~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~ 177 (263)
T PRK06181 136 SSLAGLTGVP---------T-----------------------------RSGYAASKHALHGFFDSLRIELADDGVAVTV 177 (263)
T ss_pred ecccccCCCC---------C-----------------------------ccHHHHHHHHHHHHHHHHHHHhhhcCceEEE
Confidence 9975542211 0 16899999999998876543 5899999
Q ss_pred EecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhh
Q psy7538 249 LRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWD 313 (543)
Q Consensus 249 lRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~ 313 (543)
++|+.|..+..... .. ..+.. ....+....++++++|+|++++.++..
T Consensus 178 i~pg~v~t~~~~~~-------~~--------~~~~~--~~~~~~~~~~~~~~~dva~~i~~~~~~ 225 (263)
T PRK06181 178 VCPGFVATDIRKRA-------LD--------GDGKP--LGKSPMQESKIMSAEECAEAILPAIAR 225 (263)
T ss_pred EecCccccCcchhh-------cc--------ccccc--cccccccccCCCCHHHHHHHHHHHhhC
Confidence 99987765432110 00 01111 111122334789999999999988864
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.9e-15 Score=148.07 Aligned_cols=217 Identities=11% Similarity=0.134 Sum_probs=149.7
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++++++||||+|++|+++++.|++.|+ +|.++.|+.+ +++++. .+ .+..++.+|+
T Consensus 7 ~~~~~~lItGa~g~iG~~~a~~l~~~g~---~V~~~~r~~~------~~~~~~---------~~------~~~~~~~~D~ 62 (245)
T PRK07060 7 FSGKSVLVTGASSGIGRACAVALAQRGA---RVVAAARNAA------ALDRLA---------GE------TGCEPLRLDV 62 (245)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHH---------HH------hCCeEEEecC
Confidence 5789999999999999999999999987 7888888642 222110 00 1345788999
Q ss_pred CCCCCCCCHHHHHHHhc---CccEEEEcCccCCCc-------ccHHHHHHHHHHHHHHHHHHHHhc---c-CCceEEEEe
Q psy7538 108 TQLKLGISEIDKKELID---NVDIVYHVAATIRFD-------EPIKTAVILNTRGTRDMLELSKQM---K-NLKCFTYIS 173 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~---~vd~ViH~AA~v~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~-~l~~~V~vS 173 (543)
++++ ++..+++ .+|+|||+|+..... +.++..+++|+.++.++++++.+. + ...+||++|
T Consensus 63 ~~~~------~v~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~s 136 (245)
T PRK07060 63 GDDA------AIRAALAAAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVS 136 (245)
T ss_pred CCHH------HHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEc
Confidence 8864 5555554 489999999975421 345567889999999999988753 1 136899999
Q ss_pred cCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEEE
Q psy7538 174 TAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMIL 249 (543)
Q Consensus 174 T~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~Il 249 (543)
|..+..... ....|+.+|..+|.+++.++. .+++++.+
T Consensus 137 S~~~~~~~~--------------------------------------~~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v 178 (245)
T PRK07060 137 SQAALVGLP--------------------------------------DHLAYCASKAALDAITRVLCVELGPHGIRVNSV 178 (245)
T ss_pred cHHHcCCCC--------------------------------------CCcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEE
Confidence 985543211 016899999999999887654 47999999
Q ss_pred ecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEee
Q psy7538 250 RPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLT 329 (543)
Q Consensus 250 Rps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~ 329 (543)
||+.|.++.... -| ..+. ........ .....+++++|+++++..++..... ...++++++.
T Consensus 179 ~pg~v~~~~~~~--~~----~~~~-~~~~~~~~---------~~~~~~~~~~d~a~~~~~l~~~~~~---~~~G~~~~~~ 239 (245)
T PRK07060 179 NPTVTLTPMAAE--AW----SDPQ-KSGPMLAA---------IPLGRFAEVDDVAAPILFLLSDAAS---MVSGVSLPVD 239 (245)
T ss_pred eeCCCCCchhhh--hc----cCHH-HHHHHHhc---------CCCCCCCCHHHHHHHHHHHcCcccC---CccCcEEeEC
Confidence 999998775321 01 1111 11111111 1124589999999999988865432 1357888887
Q ss_pred cC
Q psy7538 330 SN 331 (543)
Q Consensus 330 s~ 331 (543)
++
T Consensus 240 ~g 241 (245)
T PRK07060 240 GG 241 (245)
T ss_pred CC
Confidence 65
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.8e-15 Score=146.28 Aligned_cols=221 Identities=13% Similarity=0.117 Sum_probs=149.8
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|.||++++++|++.|+ +|.++.|+... +++.. +.++ ....++.++.+|+
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~G~---~v~~~~r~~~~------~~~~~-----~~~~-----~~~~~~~~~~~Dl 65 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEAGA---TVAFNDGLAAE------ARELA-----AALE-----AAGGRAHAIAADL 65 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHcCC---EEEEEeCCHHH------HHHHH-----HHHH-----hcCCcEEEEEccC
Confidence 5689999999999999999999999987 77888776421 11110 1111 1124688999999
Q ss_pred CCCCCCCCHHHHHHHh-------cCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELI-------DNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ +++.++ .++|+|||+|+.... .+.++..+++|+.|+.++++.+... .+-.+||
T Consensus 66 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv 139 (250)
T PRK12939 66 ADPA------SVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIV 139 (250)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEE
Confidence 9875 555554 358999999997532 2345667899999999999888652 1245899
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... . ...|+.+|+..|.+++..+. .++++
T Consensus 140 ~isS~~~~~~~~----------~----------------------------~~~y~~sK~~~~~~~~~l~~~~~~~~i~v 181 (250)
T PRK12939 140 NLASDTALWGAP----------K----------------------------LGAYVASKGAVIGMTRSLARELGGRGITV 181 (250)
T ss_pred EECchhhccCCC----------C----------------------------cchHHHHHHHHHHHHHHHHHHHhhhCEEE
Confidence 999975432211 0 05799999999999887553 47999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
.+++|+.|..+.....+ .......... ......+++++|++++++.++..... ...|+.+
T Consensus 182 ~~v~pg~v~t~~~~~~~--------~~~~~~~~~~---------~~~~~~~~~~~dva~~~~~l~~~~~~---~~~G~~i 241 (250)
T PRK12939 182 NAIAPGLTATEATAYVP--------ADERHAYYLK---------GRALERLQVPDDVAGAVLFLLSDAAR---FVTGQLL 241 (250)
T ss_pred EEEEECCCCCccccccC--------ChHHHHHHHh---------cCCCCCCCCHHHHHHHHHHHhCcccc---CccCcEE
Confidence 99999987655322110 0112221221 12234578899999999998865432 1247788
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
++.++
T Consensus 242 ~~~gg 246 (250)
T PRK12939 242 PVNGG 246 (250)
T ss_pred EECCC
Confidence 88765
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.6e-15 Score=152.98 Aligned_cols=224 Identities=12% Similarity=0.081 Sum_probs=152.1
Q ss_pred hhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 26 KTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 26 ~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
..+++|+++||||+|+||.+++++|++.|. +|++..|.... ..+.+.+.+ .....++.++.+
T Consensus 42 ~~~~~k~iLItGasggIG~~la~~l~~~G~---~V~l~~r~~~~--~~~~~~~~~-------------~~~~~~~~~~~~ 103 (290)
T PRK06701 42 GKLKGKVALITGGDSGIGRAVAVLFAKEGA---DIAIVYLDEHE--DANETKQRV-------------EKEGVKCLLIPG 103 (290)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCcch--HHHHHHHHH-------------HhcCCeEEEEEc
Confidence 346689999999999999999999999986 77888886422 111221111 111246788999
Q ss_pred cCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC--------cccHHHHHHHHHHHHHHHHHHHHhc-cCCceE
Q psy7538 106 DITQLKLGISEIDKKELID-------NVDIVYHVAATIRF--------DEPIKTAVILNTRGTRDMLELSKQM-KNLKCF 169 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~ 169 (543)
|+++.+ ++..+++ ++|+|||+|+.... .+.+...+++|+.|+.++++++... ..-.++
T Consensus 104 Dl~~~~------~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~i 177 (290)
T PRK06701 104 DVSDEA------FCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAI 177 (290)
T ss_pred cCCCHH------HHHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeE
Confidence 999875 4554443 58999999986422 1334568999999999999998763 223689
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+...... ...|+.+|+..+.+++..+. .+++
T Consensus 178 V~isS~~~~~~~~~--------------------------------------~~~Y~~sK~a~~~l~~~la~~~~~~gIr 219 (290)
T PRK06701 178 INTGSITGYEGNET--------------------------------------LIDYSATKGAIHAFTRSLAQSLVQKGIR 219 (290)
T ss_pred EEEecccccCCCCC--------------------------------------cchhHHHHHHHHHHHHHHHHHhhhcCeE
Confidence 99999865432110 15799999999999887765 4899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
++.++|+.|..+.... . .. ........ .......+.+++|+|++++.++..... ...+.+
T Consensus 220 v~~i~pG~v~T~~~~~------~-~~-~~~~~~~~---------~~~~~~~~~~~~dva~~~~~ll~~~~~---~~~G~~ 279 (290)
T PRK06701 220 VNAVAPGPIWTPLIPS------D-FD-EEKVSQFG---------SNTPMQRPGQPEELAPAYVFLASPDSS---YITGQM 279 (290)
T ss_pred EEEEecCCCCCccccc------c-cC-HHHHHHHH---------hcCCcCCCcCHHHHHHHHHHHcCcccC---CccCcE
Confidence 9999999887753211 0 11 11111111 112234578899999999988776432 124778
Q ss_pred EEeecC
Q psy7538 326 CNLTSN 331 (543)
Q Consensus 326 yni~s~ 331 (543)
+++.++
T Consensus 280 i~idgg 285 (290)
T PRK06701 280 LHVNGG 285 (290)
T ss_pred EEeCCC
Confidence 888765
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.68 E-value=5.3e-16 Score=153.25 Aligned_cols=219 Identities=10% Similarity=0.003 Sum_probs=144.2
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
.++||+|+||||+|+||++++++|++.|+ +|.++.|+.. +..++. .....++.++.+|
T Consensus 7 ~~~~k~vlItG~sg~IG~~~a~~l~~~g~---~v~~~~~~~~------~~~~~~-------------~~~~~~~~~~~~D 64 (255)
T PRK05717 7 GHNGRVALVTGAARGIGLGIAAWLIAEGW---QVVLADLDRE------RGSKVA-------------KALGENAWFIAMD 64 (255)
T ss_pred ccCCCEEEEeCCcchHHHHHHHHHHHcCC---EEEEEcCCHH------HHHHHH-------------HHcCCceEEEEcc
Confidence 46789999999999999999999999986 7888877542 111110 1112367889999
Q ss_pred CCCCCCCCCHHHHHHHh-------cCccEEEEcCccCCC---------cccHHHHHHHHHHHHHHHHHHHHhc--cCCce
Q psy7538 107 ITQLKLGISEIDKKELI-------DNVDIVYHVAATIRF---------DEPIKTAVILNTRGTRDMLELSKQM--KNLKC 168 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~---------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~l~~ 168 (543)
+++++ ++..++ ..+|+|||+||.... .+.++..+++|+.|+.++++++... +...+
T Consensus 65 l~~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ 138 (255)
T PRK05717 65 VADEA------QVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGA 138 (255)
T ss_pred CCCHH------HHHHHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcE
Confidence 99875 443332 247999999997532 1335678999999999999999642 12368
Q ss_pred EEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh---cCCc
Q psy7538 169 FTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME---LGMP 245 (543)
Q Consensus 169 ~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~---~~lp 245 (543)
+|++||..+..... ..+.|+.+|+..|.+++..+. .+++
T Consensus 139 ii~~sS~~~~~~~~--------------------------------------~~~~Y~~sKaa~~~~~~~la~~~~~~i~ 180 (255)
T PRK05717 139 IVNLASTRARQSEP--------------------------------------DTEAYAASKGGLLALTHALAISLGPEIR 180 (255)
T ss_pred EEEEcchhhcCCCC--------------------------------------CCcchHHHHHHHHHHHHHHHHHhcCCCE
Confidence 99999875432210 016899999999999987765 3589
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
+.+++|+.|.++..... . ...+. ....+. .....+.+++|+++++..++..... ...+.+
T Consensus 181 v~~i~Pg~i~t~~~~~~-------~-~~~~~-~~~~~~--------~~~~~~~~~~~va~~~~~l~~~~~~---~~~g~~ 240 (255)
T PRK05717 181 VNAVSPGWIDARDPSQR-------R-AEPLS-EADHAQ--------HPAGRVGTVEDVAAMVAWLLSRQAG---FVTGQE 240 (255)
T ss_pred EEEEecccCcCCccccc-------c-chHHH-HHHhhc--------CCCCCCcCHHHHHHHHHHHcCchhc---CccCcE
Confidence 99999998877632110 0 00111 111110 0112356889999998877754321 123566
Q ss_pred EEeecC
Q psy7538 326 CNLTSN 331 (543)
Q Consensus 326 yni~s~ 331 (543)
+.+.++
T Consensus 241 ~~~~gg 246 (255)
T PRK05717 241 FVVDGG 246 (255)
T ss_pred EEECCC
Confidence 666544
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.5e-15 Score=152.25 Aligned_cols=229 Identities=15% Similarity=0.112 Sum_probs=148.0
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|+||++++++|++.|+ +|+++.|.... .+.+.+ .+ . ...++.++.+|+
T Consensus 16 l~~k~~lItGas~gIG~~la~~l~~~G~---~v~~~~~~~~~---~~~~~~--------~~-----~-~~~~~~~~~~Dl 75 (280)
T PLN02253 16 LLGKVALVTGGATGIGESIVRLFHKHGA---KVCIVDLQDDL---GQNVCD--------SL-----G-GEPNVCFFHCDV 75 (280)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCC---EEEEEeCCHHH---HHHHHH--------Hh-----c-CCCceEEEEeec
Confidence 5789999999999999999999999987 78888875321 111111 01 1 124688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC---------cccHHHHHHHHHHHHHHHHHHHHhc---cCCce
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF---------DEPIKTAVILNTRGTRDMLELSKQM---KNLKC 168 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~---------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~ 168 (543)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... .+-.+
T Consensus 76 ~d~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ 149 (280)
T PLN02253 76 TVED------DVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGS 149 (280)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCce
Confidence 9875 5655554 68999999987531 1345678999999999999887642 12357
Q ss_pred EEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCC
Q psy7538 169 FTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGM 244 (543)
Q Consensus 169 ~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~l 244 (543)
+|++||..+.... ..+..|+.||+..|.+.+..+. .++
T Consensus 150 ii~isS~~~~~~~--------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi 191 (280)
T PLN02253 150 IVSLCSVASAIGG--------------------------------------LGPHAYTGSKHAVLGLTRSVAAELGKHGI 191 (280)
T ss_pred EEEecChhhcccC--------------------------------------CCCcccHHHHHHHHHHHHHHHHHhhhcCe
Confidence 8999887542110 0116899999999999987655 479
Q ss_pred cEEEEecCeeeecCCCC-CCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCC
Q psy7538 245 PCMILRPSIVVPIYKEP-LPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERK 323 (543)
Q Consensus 245 p~~IlRps~V~G~~~~p-~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~ 323 (543)
.+.+++|+.|..+.... .++ . ......+...... ...........++++|++++++.++..... ...+
T Consensus 192 ~v~~i~pg~v~t~~~~~~~~~---~-~~~~~~~~~~~~~----~~~~~~l~~~~~~~~dva~~~~~l~s~~~~---~i~G 260 (280)
T PLN02253 192 RVNCVSPYAVPTALALAHLPE---D-ERTEDALAGFRAF----AGKNANLKGVELTVDDVANAVLFLASDEAR---YISG 260 (280)
T ss_pred EEEEEeeCccccccccccccc---c-cchhhhhhhhHHH----hhcCCCCcCCCCCHHHHHHHHHhhcCcccc---cccC
Confidence 99999999987653211 110 0 0001111111000 000000112246799999999888754322 1246
Q ss_pred cEEEeecC
Q psy7538 324 SVCNLTSN 331 (543)
Q Consensus 324 ~vyni~s~ 331 (543)
..+++.++
T Consensus 261 ~~i~vdgG 268 (280)
T PLN02253 261 LNLMIDGG 268 (280)
T ss_pred cEEEECCc
Confidence 78888766
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.5e-15 Score=147.56 Aligned_cols=221 Identities=12% Similarity=0.127 Sum_probs=142.4
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+++++||||||+||++++++|++.|+ .|.+..|... ++.+++ .+.++. ...++.++.+|+++
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~---~vv~~~~~~~-----~~~~~~-----~~~l~~-----~~~~~~~~~~Dl~~ 63 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGY---AVCLNYLRNR-----DAAEAV-----VQAIRR-----QGGEALAVAADVAD 63 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC---eEEEecCCCH-----HHHHHH-----HHHHHh-----CCCcEEEEEeccCC
Confidence 46899999999999999999999986 5555544321 122211 111211 12357789999998
Q ss_pred CCCCCCHHHHHHHhc-------CccEEEEcCccCCC--------cccHHHHHHHHHHHHHHHHHHHHhc-c-----CCce
Q psy7538 110 LKLGISEIDKKELID-------NVDIVYHVAATIRF--------DEPIKTAVILNTRGTRDMLELSKQM-K-----NLKC 168 (543)
Q Consensus 110 ~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~-~-----~l~~ 168 (543)
++ ++..+++ .+|+|||+|+.... .+.+...+++|+.|+.++++.+.+. . .-.+
T Consensus 64 ~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~ 137 (248)
T PRK06123 64 EA------DVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGA 137 (248)
T ss_pred HH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeE
Confidence 75 5555544 58999999987531 1234567999999999998887642 0 1236
Q ss_pred EEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCC
Q psy7538 169 FTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGM 244 (543)
Q Consensus 169 ~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~l 244 (543)
+|++||..+.... |. ....|+.+|+..|.+++..+. +++
T Consensus 138 iv~~sS~~~~~~~----------~~---------------------------~~~~Y~~sKaa~~~~~~~la~~~~~~~i 180 (248)
T PRK06123 138 IVNVSSMAARLGS----------PG---------------------------EYIDYAASKGAIDTMTIGLAKEVAAEGI 180 (248)
T ss_pred EEEECchhhcCCC----------CC---------------------------CccchHHHHHHHHHHHHHHHHHhcccCe
Confidence 9999997543211 00 003699999999998877654 489
Q ss_pred cEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCc
Q psy7538 245 PCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKS 324 (543)
Q Consensus 245 p~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~ 324 (543)
+++++||+.|+++.... . ..+ ..+.......+. .-...++|++++++.++..... ...++
T Consensus 181 ~v~~i~pg~v~~~~~~~------~-~~~-~~~~~~~~~~p~---------~~~~~~~d~a~~~~~l~~~~~~---~~~g~ 240 (248)
T PRK06123 181 RVNAVRPGVIYTEIHAS------G-GEP-GRVDRVKAGIPM---------GRGGTAEEVARAILWLLSDEAS---YTTGT 240 (248)
T ss_pred EEEEEecCcccCchhhc------c-CCH-HHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCcccc---CccCC
Confidence 99999999999875321 0 111 122222211110 1123679999999987765321 12477
Q ss_pred EEEeecC
Q psy7538 325 VCNLTSN 331 (543)
Q Consensus 325 vyni~s~ 331 (543)
+|++.++
T Consensus 241 ~~~~~gg 247 (248)
T PRK06123 241 FIDVSGG 247 (248)
T ss_pred EEeecCC
Confidence 8988764
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.1e-15 Score=146.14 Aligned_cols=199 Identities=15% Similarity=0.175 Sum_probs=139.6
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++++++||||+|+||++++++|++.|+ +|.++.|+... .+++ .+.+. ....++.++.+|+
T Consensus 5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~---~Vi~~~r~~~~------~~~~-----~~~~~-----~~~~~~~~~~~D~ 65 (239)
T PRK07666 5 LQGKNALITGAGRGIGRAVAIALAKEGV---NVGLLARTEEN------LKAV-----AEEVE-----AYGVKVVIATADV 65 (239)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCC---EEEEEeCCHHH------HHHH-----HHHHH-----HhCCeEEEEECCC
Confidence 4678999999999999999999999986 78889887531 1111 11111 1124788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ ++..+++ ++|+|||+|+.... .+.+...+++|+.|+.++++.+... .+.+++|
T Consensus 66 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv 139 (239)
T PRK07666 66 SDYE------EVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDII 139 (239)
T ss_pred CCHH------HHHHHHHHHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEE
Confidence 9875 5555554 69999999986432 1345668999999999998887642 2467899
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... ..+.|+.+|+..+.+++.... .++++
T Consensus 140 ~~ss~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v 181 (239)
T PRK07666 140 NISSTAGQKGAA--------------------------------------VTSAYSASKFGVLGLTESLMQEVRKHNIRV 181 (239)
T ss_pred EEcchhhccCCC--------------------------------------CCcchHHHHHHHHHHHHHHHHHhhccCcEE
Confidence 999985432211 016799999998888876543 58999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhh
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDF 314 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~ 314 (543)
.++||+.|.++..... ... .+ ....+++.+|+|++++.++...
T Consensus 182 ~~v~pg~v~t~~~~~~---------------~~~-------~~---~~~~~~~~~~~a~~~~~~l~~~ 224 (239)
T PRK07666 182 TALTPSTVATDMAVDL---------------GLT-------DG---NPDKVMQPEDLAEFIVAQLKLN 224 (239)
T ss_pred EEEecCcccCcchhhc---------------ccc-------cc---CCCCCCCHHHHHHHHHHHHhCC
Confidence 9999998866532110 000 01 1124578999999999988664
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.1e-15 Score=147.30 Aligned_cols=221 Identities=11% Similarity=0.162 Sum_probs=148.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|+||+.++++|++.|+ +|.++.|... .....++.++.+|+
T Consensus 6 ~~~k~vlItGas~~iG~~la~~l~~~G~---~v~~~~~~~~-------------------------~~~~~~~~~~~~D~ 57 (252)
T PRK08220 6 FSGKTVWVTGAAQGIGYAVALAFVEAGA---KVIGFDQAFL-------------------------TQEDYPFATFVLDV 57 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEecchh-------------------------hhcCCceEEEEecC
Confidence 5789999999999999999999999987 7888888640 11124678899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ ++..+++ .+|+|||+|+.... .+.++..+++|+.++..+++.+... .+..++|
T Consensus 58 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv 131 (252)
T PRK08220 58 SDAA------AVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIV 131 (252)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEE
Confidence 9875 5666554 47999999997542 2345678999999999999988542 2346899
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... ....|+.+|+..|.+++..+. .++++
T Consensus 132 ~~ss~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v 173 (252)
T PRK08220 132 TVGSNAAHVPRI--------------------------------------GMAAYGASKAALTSLAKCVGLELAPYGVRC 173 (252)
T ss_pred EECCchhccCCC--------------------------------------CCchhHHHHHHHHHHHHHHHHHhhHhCeEE
Confidence 999975432110 016899999999999877654 58999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
.+++|+.|.++...... .+.......+...... .........+++++|+|++++.++..... . ..+++.
T Consensus 174 ~~i~pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~dva~~~~~l~~~~~~-~--~~g~~i 242 (252)
T PRK08220 174 NVVSPGSTDTDMQRTLW---VDEDGEQQVIAGFPEQ-----FKLGIPLGKIARPQEIANAVLFLASDLAS-H--ITLQDI 242 (252)
T ss_pred EEEecCcCcchhhhhhc---cchhhhhhhhhhHHHH-----HhhcCCCcccCCHHHHHHHHHHHhcchhc-C--ccCcEE
Confidence 99999999887532210 0000000000000000 00111234689999999999988754322 1 235555
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
.+.++
T Consensus 243 ~~~gg 247 (252)
T PRK08220 243 VVDGG 247 (252)
T ss_pred EECCC
Confidence 55554
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=5.8e-15 Score=146.11 Aligned_cols=221 Identities=9% Similarity=0.122 Sum_probs=145.4
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
.+|+++||||+|+||++++++|++.|. +|+++.|... ++++++ .+.++ ....++.++.+|++
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~---~v~~~~~~~~-----~~~~~~-----~~~~~-----~~~~~~~~~~~Dl~ 69 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGF---DVAVHYNRSR-----DEAEAL-----AAEIR-----ALGRRAVALQADLA 69 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCCH-----HHHHHH-----HHHHH-----hcCCeEEEEEcCCC
Confidence 578999999999999999999999986 6777666432 122111 11111 11246888999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhcc---CCceEEE
Q psy7538 109 QLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQMK---NLKCFTY 171 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~---~l~~~V~ 171 (543)
+++ ++..+++ .+|+|||+||.... .+.++..+++|+.|+..+++.+.... .-.++|+
T Consensus 70 d~~------~~~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~ 143 (258)
T PRK09134 70 DEA------EVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVN 143 (258)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEE
Confidence 875 4554443 47999999986432 23456789999999999999887531 2357788
Q ss_pred EecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh---cCCcEEE
Q psy7538 172 ISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME---LGMPCMI 248 (543)
Q Consensus 172 vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~---~~lp~~I 248 (543)
+||..+... .|. ...|+.||+..|.+.+.++. .++.++.
T Consensus 144 ~~s~~~~~~----------~p~----------------------------~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~ 185 (258)
T PRK09134 144 MIDQRVWNL----------NPD----------------------------FLSYTLSKAALWTATRTLAQALAPRIRVNA 185 (258)
T ss_pred ECchhhcCC----------CCC----------------------------chHHHHHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 877533211 010 04799999999999888765 2489999
Q ss_pred EecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEe
Q psy7538 249 LRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNL 328 (543)
Q Consensus 249 lRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni 328 (543)
++|+.+...... .+..+ .....+.. .....+++|+|++++.++..... .++.|++
T Consensus 186 i~PG~v~t~~~~----------~~~~~-~~~~~~~~---------~~~~~~~~d~a~~~~~~~~~~~~-----~g~~~~i 240 (258)
T PRK09134 186 IGPGPTLPSGRQ----------SPEDF-ARQHAATP---------LGRGSTPEEIAAAVRYLLDAPSV-----TGQMIAV 240 (258)
T ss_pred eecccccCCccc----------ChHHH-HHHHhcCC---------CCCCcCHHHHHHHHHHHhcCCCc-----CCCEEEE
Confidence 999877553211 01111 11111111 11236799999999999875433 5788988
Q ss_pred ecCCCCcccH
Q psy7538 329 TSNKDYKITW 338 (543)
Q Consensus 329 ~s~~~~~~t~ 338 (543)
.++ ..++|
T Consensus 241 ~gg--~~~~~ 248 (258)
T PRK09134 241 DGG--QHLAW 248 (258)
T ss_pred CCC--eeccc
Confidence 877 44444
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.4e-15 Score=144.92 Aligned_cols=161 Identities=14% Similarity=0.178 Sum_probs=121.5
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++++|+||||||+||+++++.|++.|+ .+|.++.|+.+... . ...++.++.+|+
T Consensus 4 ~~~~~vlItGgsg~iG~~la~~l~~~G~--~~V~~~~r~~~~~~----------------------~-~~~~~~~~~~D~ 58 (238)
T PRK08264 4 IKGKVVLVTGANRGIGRAFVEQLLARGA--AKVYAAARDPESVT----------------------D-LGPRVVPLQLDV 58 (238)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCc--ccEEEEecChhhhh----------------------h-cCCceEEEEecC
Confidence 4678999999999999999999999985 36888888753210 0 124688999999
Q ss_pred CCCCCCCCHHHHHHHhc---CccEEEEcCcc-CCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEEEEe
Q psy7538 108 TQLKLGISEIDKKELID---NVDIVYHVAAT-IRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFTYIS 173 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~---~vd~ViH~AA~-v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~vS 173 (543)
++++ +++.+++ .+|+|||+|+. ... .+.+...+++|+.++.++++++.+. .+..+||++|
T Consensus 59 ~~~~------~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~s 132 (238)
T PRK08264 59 TDPA------SVAAAAEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVL 132 (238)
T ss_pred CCHH------HHHHHHHhcCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEc
Confidence 9876 6666665 58999999997 211 2345567899999999999987532 2467899999
Q ss_pred cCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEEE
Q psy7538 174 TAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMIL 249 (543)
Q Consensus 174 T~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~Il 249 (543)
|..+..... ..+.|+.+|..+|.+....+. .+++++++
T Consensus 133 S~~~~~~~~--------------------------------------~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v 174 (238)
T PRK08264 133 SVLSWVNFP--------------------------------------NLGTYSASKAAAWSLTQALRAELAPQGTRVLGV 174 (238)
T ss_pred ChhhccCCC--------------------------------------CchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEE
Confidence 986532211 116899999999998887654 48999999
Q ss_pred ecCeeeec
Q psy7538 250 RPSIVVPI 257 (543)
Q Consensus 250 Rps~V~G~ 257 (543)
||+.+.++
T Consensus 175 ~pg~v~t~ 182 (238)
T PRK08264 175 HPGPIDTD 182 (238)
T ss_pred eCCccccc
Confidence 99988654
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.66 E-value=7.9e-15 Score=144.06 Aligned_cols=219 Identities=12% Similarity=0.113 Sum_probs=146.5
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+|+||||+|+||++++++|++.|+ +|+++.|+.. +.+.+. + .....++..+.+|+
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~---~vi~~~r~~~-----~~~~~~--------~-----~~~~~~~~~~~~D~ 61 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEAGA---DIVGAGRSEP-----SETQQQ--------V-----EALGRRFLSLTADL 61 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEcCchH-----HHHHHH--------H-----HhcCCceEEEECCC
Confidence 5789999999999999999999999987 7888888542 111111 1 11124688999999
Q ss_pred CCCCCCCCHHHHHHHh-------cCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cC-CceE
Q psy7538 108 TQLKLGISEIDKKELI-------DNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KN-LKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~-l~~~ 169 (543)
++++ ++..++ .++|+|||+|+.... .+.++..+++|+.++.++++.+... ++ -.++
T Consensus 62 ~~~~------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~i 135 (248)
T TIGR01832 62 SDIE------AIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKI 135 (248)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEE
Confidence 9876 554433 358999999987532 1345667999999999999987542 12 4689
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+..... ....|+.+|+..+.+.+..+. +++.
T Consensus 136 v~~sS~~~~~~~~--------------------------------------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~ 177 (248)
T TIGR01832 136 INIASMLSFQGGI--------------------------------------RVPSYTASKHGVAGLTKLLANEWAAKGIN 177 (248)
T ss_pred EEEecHHhccCCC--------------------------------------CCchhHHHHHHHHHHHHHHHHHhCccCcE
Confidence 9999985543211 015799999999999887765 4899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
+.+++|+.|..+...... ........... . .....++..+|+|++++.++..... ...+.+
T Consensus 178 v~~v~pg~v~t~~~~~~~-------~~~~~~~~~~~-~--------~~~~~~~~~~dva~~~~~l~s~~~~---~~~G~~ 238 (248)
T TIGR01832 178 VNAIAPGYMATNNTQALR-------ADEDRNAAILE-R--------IPAGRWGTPDDIGGPAVFLASSASD---YVNGYT 238 (248)
T ss_pred EEEEEECcCcCcchhccc-------cChHHHHHHHh-c--------CCCCCCcCHHHHHHHHHHHcCcccc---CcCCcE
Confidence 999999988665322110 00011111111 0 1124678899999999888864332 123555
Q ss_pred EEeec
Q psy7538 326 CNLTS 330 (543)
Q Consensus 326 yni~s 330 (543)
+.+.+
T Consensus 239 i~~dg 243 (248)
T TIGR01832 239 LAVDG 243 (248)
T ss_pred EEeCC
Confidence 55544
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.1e-14 Score=144.09 Aligned_cols=224 Identities=14% Similarity=0.097 Sum_probs=144.9
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|+||++++++|++.|+ +|+++.|+.. ++++.. +.++ ....++.++.+|+
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~G~---~V~~~~r~~~------~~~~~~-----~~i~-----~~~~~~~~~~~Dl 70 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEAGA---RVVLSARKAE------ELEEAA-----AHLE-----ALGIDALWIAADV 70 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCC---EEEEEeCCHH------HHHHHH-----HHHH-----hcCCeEEEEEccC
Confidence 4689999999999999999999999987 7888888642 121110 1111 1124678899999
Q ss_pred CCCCCCCCHHHHHHHh-------cCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc----cCCceE
Q psy7538 108 TQLKLGISEIDKKELI-------DNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM----KNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~l~~~ 169 (543)
++++ +++.++ ..+|+|||+|+.... .+.++..+++|+.|+.++++++... ++..+|
T Consensus 71 ~d~~------~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~ 144 (259)
T PRK08213 71 ADEA------DIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRI 144 (259)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEE
Confidence 9876 554433 358999999986421 2345667899999999999988653 245799
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+.....+. + . ....|+.+|+..|.+++.++. .+++
T Consensus 145 v~~sS~~~~~~~~~~----~-~-----------------------------~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~ 190 (259)
T PRK08213 145 INVASVAGLGGNPPE----V-M-----------------------------DTIAYNTSKGAVINFTRALAAEWGPHGIR 190 (259)
T ss_pred EEECChhhccCCCcc----c-c-----------------------------CcchHHHHHHHHHHHHHHHHHHhcccCEE
Confidence 999997543321100 0 0 016899999999999987755 4789
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
+.+++|+.+-.+.... . ...+......+.. ..-+...+|+++++..++..... ...|.+
T Consensus 191 v~~v~Pg~~~t~~~~~-------~--~~~~~~~~~~~~~---------~~~~~~~~~va~~~~~l~~~~~~---~~~G~~ 249 (259)
T PRK08213 191 VNAIAPGFFPTKMTRG-------T--LERLGEDLLAHTP---------LGRLGDDEDLKGAALLLASDASK---HITGQI 249 (259)
T ss_pred EEEEecCcCCCcchhh-------h--hHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCcccc---CccCCE
Confidence 9999998764432110 0 0112222221111 11234578898887777654332 124677
Q ss_pred EEeecC
Q psy7538 326 CNLTSN 331 (543)
Q Consensus 326 yni~s~ 331 (543)
+++..+
T Consensus 250 ~~~~~~ 255 (259)
T PRK08213 250 LAVDGG 255 (259)
T ss_pred EEECCC
Confidence 777654
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.8e-15 Score=167.04 Aligned_cols=229 Identities=15% Similarity=0.166 Sum_probs=154.8
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
-+.||+|+||||+|+||+++++.|++.|. +|+++.|+.. +++... +.+ ... .++..+.+|
T Consensus 419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga---~Vvl~~r~~~------~~~~~~-----~~l-----~~~-~~v~~v~~D 478 (681)
T PRK08324 419 PLAGKVALVTGAAGGIGKATAKRLAAEGA---CVVLADLDEE------AAEAAA-----AEL-----GGP-DRALGVACD 478 (681)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCcC---EEEEEeCCHH------HHHHHH-----HHH-----hcc-CcEEEEEec
Confidence 35789999999999999999999999986 7889988752 221110 001 111 478899999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCC-ce
Q psy7538 107 ITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNL-KC 168 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l-~~ 168 (543)
+++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+.+. .+. .+
T Consensus 479 vtd~~------~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~ 552 (681)
T PRK08324 479 VTDEA------AVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGS 552 (681)
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcE
Confidence 99875 5555443 68999999996432 2345668999999999998877542 133 68
Q ss_pred EEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCC
Q psy7538 169 FTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGM 244 (543)
Q Consensus 169 ~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~l 244 (543)
||++||..+..... ....|+.+|+..|.+++.++. .++
T Consensus 553 iV~vsS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI 594 (681)
T PRK08324 553 IVFIASKNAVNPGP--------------------------------------NFGAYGAAKAAELHLVRQLALELGPDGI 594 (681)
T ss_pred EEEECCccccCCCC--------------------------------------CcHHHHHHHHHHHHHHHHHHHHhcccCe
Confidence 99999975532110 016899999999999988754 479
Q ss_pred cEEEEecCeee-ecCCCCCCCCCCCCCchHHHHHHHhcCcee----EEeecCCcccccchHHHHHHHHHHHhhhhcccCC
Q psy7538 245 PCMILRPSIVV-PIYKEPLPGWTDNINGPTGLLIGAGKGVIR----SMYCKNTGMADFLPADVAINGVFLFTWDFLNSKE 319 (543)
Q Consensus 245 p~~IlRps~V~-G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~----~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~ 319 (543)
++.+++|+.|| ++... .++|.. ......|... ..+.++....++++++|+|++++.++.....
T Consensus 595 rvn~v~Pg~v~~~t~~~-~~~~~~--------~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~~~l~s~~~~--- 662 (681)
T PRK08324 595 RVNGVNPDAVVRGSGIW-TGEWIE--------ARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAVVFLASGLLS--- 662 (681)
T ss_pred EEEEEeCceeecCCccc-cchhhh--------hhhhhccCChHHHHHHHHhcCCcCCccCHHHHHHHHHHHhCcccc---
Confidence 99999999998 54211 011110 0111111110 0133455667899999999999988742211
Q ss_pred CCCCcEEEeecC
Q psy7538 320 SERKSVCNLTSN 331 (543)
Q Consensus 320 ~~~~~vyni~s~ 331 (543)
...+.++++.++
T Consensus 663 ~~tG~~i~vdgG 674 (681)
T PRK08324 663 KTTGAIITVDGG 674 (681)
T ss_pred CCcCCEEEECCC
Confidence 125789999887
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.5e-14 Score=146.22 Aligned_cols=224 Identities=13% Similarity=0.113 Sum_probs=148.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|+||++++++|++.|+ +|++..|+..... .+.+.+.+ .....++.++.+|+
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G~---~Vi~~~~~~~~~~-~~~~~~~~-------------~~~~~~~~~~~~Dl 109 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGA---DVAISYLPVEEED-AQDVKKII-------------EECGRKAVLLPGDL 109 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCC---EEEEecCCcchhh-HHHHHHHH-------------HHcCCeEEEEEccC
Confidence 6789999999999999999999999987 6777666543211 22232221 11124677899999
Q ss_pred CCCCCCCCHHHHHHHh-------cCccEEEEcCccCC----C----cccHHHHHHHHHHHHHHHHHHHHhc-cCCceEEE
Q psy7538 108 TQLKLGISEIDKKELI-------DNVDIVYHVAATIR----F----DEPIKTAVILNTRGTRDMLELSKQM-KNLKCFTY 171 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~ 171 (543)
++++ ++..++ .++|++||+|+... + .+.+...+++|+.|+..+++++... ..-.++|+
T Consensus 110 ~~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~ 183 (294)
T PRK07985 110 SDEK------FARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIIT 183 (294)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEE
Confidence 9875 444443 35899999998632 1 2445678999999999999998752 22358999
Q ss_pred EecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEE
Q psy7538 172 ISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCM 247 (543)
Q Consensus 172 vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~ 247 (543)
+||..+..... ....|+.||+..+.+.+..+. +|+++.
T Consensus 184 iSS~~~~~~~~--------------------------------------~~~~Y~asKaal~~l~~~la~el~~~gIrvn 225 (294)
T PRK07985 184 TSSIQAYQPSP--------------------------------------HLLDYAATKAAILNYSRGLAKQVAEKGIRVN 225 (294)
T ss_pred ECCchhccCCC--------------------------------------CcchhHHHHHHHHHHHHHHHHHHhHhCcEEE
Confidence 99986543211 015899999999988876654 589999
Q ss_pred EEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEE
Q psy7538 248 ILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCN 327 (543)
Q Consensus 248 IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyn 327 (543)
+++|+.|.++.... + ..+........... ....+...+|+|+++..++..... -..+.++.
T Consensus 226 ~i~PG~v~t~~~~~--~-----~~~~~~~~~~~~~~---------~~~r~~~pedva~~~~fL~s~~~~---~itG~~i~ 286 (294)
T PRK07985 226 IVAPGPIWTALQIS--G-----GQTQDKIPQFGQQT---------PMKRAGQPAELAPVYVYLASQESS---YVTAEVHG 286 (294)
T ss_pred EEECCcCccccccc--c-----CCCHHHHHHHhccC---------CCCCCCCHHHHHHHHHhhhChhcC---CccccEEe
Confidence 99999998774311 0 00111222222111 112345689999999888755332 12467777
Q ss_pred eecC
Q psy7538 328 LTSN 331 (543)
Q Consensus 328 i~s~ 331 (543)
+.++
T Consensus 287 vdgG 290 (294)
T PRK07985 287 VCGG 290 (294)
T ss_pred eCCC
Confidence 7665
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.65 E-value=8.8e-15 Score=142.57 Aligned_cols=216 Identities=16% Similarity=0.181 Sum_probs=142.9
Q ss_pred EEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCCCC
Q psy7538 33 IFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQLKL 112 (543)
Q Consensus 33 VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~~l 112 (543)
|+||||+|+||++++++|+++|+ +|+++.|+... +++++. +.+ .....++.++.+|+++++
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~---~v~~~~r~~~~-----~~~~~~-----~~~-----~~~~~~~~~~~~D~~~~~- 61 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGA---KVIITYRSSEE-----GAEEVV-----EEL-----KAYGVKALGVVCDVSDRE- 61 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCchh-----HHHHHH-----HHH-----HhcCCceEEEEecCCCHH-
Confidence 58999999999999999999987 78888886521 111110 111 111235788999999875
Q ss_pred CCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEEEEecC
Q psy7538 113 GISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFTYISTA 175 (543)
Q Consensus 113 gls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~vST~ 175 (543)
+++.+++ .+|+|||+|+.... .+..+..+++|+.++.++++.+... ++.++||++||.
T Consensus 62 -----~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~ 136 (239)
T TIGR01830 62 -----DVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSV 136 (239)
T ss_pred -----HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCc
Confidence 5555543 47999999997632 1345667899999999999998753 245699999997
Q ss_pred ccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEEEec
Q psy7538 176 YCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMILRP 251 (543)
Q Consensus 176 y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~IlRp 251 (543)
.+..... ....|+.+|...+.+++.... .++++.++||
T Consensus 137 ~~~~g~~--------------------------------------~~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~p 178 (239)
T TIGR01830 137 VGLMGNA--------------------------------------GQANYAASKAGVIGFTKSLAKELASRNITVNAVAP 178 (239)
T ss_pred cccCCCC--------------------------------------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEE
Confidence 4432110 016899999988888766543 5899999999
Q ss_pred CeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecC
Q psy7538 252 SIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSN 331 (543)
Q Consensus 252 s~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~ 331 (543)
+.+.++...+. . ............ ..-+.+++|++++++.++..... ...+++||+.++
T Consensus 179 g~~~~~~~~~~--------~-~~~~~~~~~~~~---------~~~~~~~~~~a~~~~~~~~~~~~---~~~g~~~~~~~g 237 (239)
T TIGR01830 179 GFIDTDMTDKL--------S-EKVKKKILSQIP---------LGRFGTPEEVANAVAFLASDEAS---YITGQVIHVDGG 237 (239)
T ss_pred CCCCChhhhhc--------C-hHHHHHHHhcCC---------cCCCcCHHHHHHHHHHHhCcccC---CcCCCEEEeCCC
Confidence 87755422211 1 111111111111 12255789999999888744321 135789999765
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.1e-14 Score=141.84 Aligned_cols=209 Identities=17% Similarity=0.149 Sum_probs=141.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+.+++|+||||||++|++++++|++.|+ +|+++.|+.. +++++. +.+. .. .++..+.+|+
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g~---~V~~~~r~~~------~~~~~~-----~~l~-----~~-~~~~~~~~D~ 63 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEGY---KVAITARDQK------ELEEAA-----AELN-----NK-GNVLGLAADV 63 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCC---EEEEeeCCHH------HHHHHH-----HHHh-----cc-CcEEEEEccC
Confidence 3578999999999999999999999876 7899998642 221111 1111 11 4688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc--cCCceEEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM--KNLKCFTY 171 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~l~~~V~ 171 (543)
++++ ++..+++ ++|+|||+|+.... .+.+...+++|+.|+.++++++.+. ++.+++|+
T Consensus 64 ~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~ 137 (237)
T PRK07326 64 RDEA------DVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIIN 137 (237)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEE
Confidence 9875 5555443 68999999987542 2334567899999999998887643 24568999
Q ss_pred EecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEE
Q psy7538 172 ISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCM 247 (543)
Q Consensus 172 vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~ 247 (543)
+||..+..... + ...|+.+|+..+.+.+.... .+++++
T Consensus 138 ~ss~~~~~~~~---------~-----------------------------~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~ 179 (237)
T PRK07326 138 ISSLAGTNFFA---------G-----------------------------GAAYNASKFGLVGFSEAAMLDLRQYGIKVS 179 (237)
T ss_pred ECChhhccCCC---------C-----------------------------CchHHHHHHHHHHHHHHHHHHhcccCcEEE
Confidence 99975432110 0 05799999988888776542 589999
Q ss_pred EEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEE
Q psy7538 248 ILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCN 327 (543)
Q Consensus 248 IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyn 327 (543)
++||+.+..+.....+ . ......+..+|++..++.++..+.. .-.....
T Consensus 180 ~v~pg~~~t~~~~~~~-------------------------~--~~~~~~~~~~d~a~~~~~~l~~~~~----~~~~~~~ 228 (237)
T PRK07326 180 TIMPGSVATHFNGHTP-------------------------S--EKDAWKIQPEDIAQLVLDLLKMPPR----TLPSKIE 228 (237)
T ss_pred EEeeccccCccccccc-------------------------c--hhhhccCCHHHHHHHHHHHHhCCcc----ccccceE
Confidence 9999977554221100 0 0001137789999999988876654 1234445
Q ss_pred eecC
Q psy7538 328 LTSN 331 (543)
Q Consensus 328 i~s~ 331 (543)
+.++
T Consensus 229 ~~~~ 232 (237)
T PRK07326 229 VRPS 232 (237)
T ss_pred EecC
Confidence 5444
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.6e-15 Score=146.72 Aligned_cols=200 Identities=15% Similarity=0.155 Sum_probs=133.6
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|+||||||++|++++++|++.|+ +|.++.|++. +++++. .....++.++.+|++++
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~---~V~~~~r~~~------~~~~~~-------------~~~~~~~~~~~~Dl~~~ 58 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGH---KVIATGRRQE------RLQELK-------------DELGDNLYIAQLDVRNR 58 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC---EEEEEECCHH------HHHHHH-------------HHhccceEEEEecCCCH
Confidence 6899999999999999999999987 7888888642 222211 01123678899999987
Q ss_pred CCCCCHHHHHHHhc-------CccEEEEcCccCC----C----cccHHHHHHHHHHHHHHHHHHHH----hccCCceEEE
Q psy7538 111 KLGISEIDKKELID-------NVDIVYHVAATIR----F----DEPIKTAVILNTRGTRDMLELSK----QMKNLKCFTY 171 (543)
Q Consensus 111 ~lgls~~~~~~l~~-------~vd~ViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~~l~~~V~ 171 (543)
+ ++..+++ ++|+|||+||... + .+.++..+++|+.|+..+++.+. +. +..++|+
T Consensus 59 ~------~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~ 131 (248)
T PRK10538 59 A------AIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVER-NHGHIIN 131 (248)
T ss_pred H------HHHHHHHHHHHHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEE
Confidence 5 4544443 6999999998632 1 23456689999999766666553 33 5679999
Q ss_pred EecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEE
Q psy7538 172 ISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCM 247 (543)
Q Consensus 172 vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~ 247 (543)
+||..+..... + .+.|+.+|...|.+.+..+. .++.+.
T Consensus 132 isS~~~~~~~~---------~-----------------------------~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~ 173 (248)
T PRK10538 132 IGSTAGSWPYA---------G-----------------------------GNVYGATKAFVRQFSLNLRTDLHGTAVRVT 173 (248)
T ss_pred ECCcccCCCCC---------C-----------------------------CchhHHHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 99975431100 0 16899999999999877654 579999
Q ss_pred EEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhh
Q psy7538 248 ILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDF 314 (543)
Q Consensus 248 IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~ 314 (543)
+++|+.+.|+..... .+.+........ . . ....+..+|+|++++.++..+
T Consensus 174 ~v~pg~i~~~~~~~~-----~~~~~~~~~~~~--------~-~---~~~~~~~~dvA~~~~~l~~~~ 223 (248)
T PRK10538 174 DIEPGLVGGTEFSNV-----RFKGDDGKAEKT--------Y-Q---NTVALTPEDVSEAVWWVATLP 223 (248)
T ss_pred EEeCCeecccccchh-----hccCcHHHHHhh--------c-c---ccCCCCHHHHHHHHHHHhcCC
Confidence 999999976532110 001111000000 0 0 113468899999998887543
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.1e-15 Score=147.64 Aligned_cols=198 Identities=13% Similarity=0.077 Sum_probs=132.7
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
++|+||||||+||++++++|++.|+ +|.++.|+.. +++.+. . .++..+.+|++++
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~---~v~~~~r~~~------~~~~~~-------------~---~~~~~~~~D~~~~ 57 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY---RVLAACRKPD------DVARMN-------------S---LGFTGILLDLDDP 57 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHH------HhHHHH-------------h---CCCeEEEeecCCH
Confidence 6899999999999999999999986 7888888642 222210 0 1467788999886
Q ss_pred CCCCCHHHHHHHh--------cCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHH----HHHHHhccCCceEEE
Q psy7538 111 KLGISEIDKKELI--------DNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDM----LELSKQMKNLKCFTY 171 (543)
Q Consensus 111 ~lgls~~~~~~l~--------~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~l----l~~a~~~~~l~~~V~ 171 (543)
+ ++..++ ..+|.++|+||.... .+.++..+++|+.|+.++ ++.+++. +.+++|+
T Consensus 58 ~------~~~~~~~~i~~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~iv~ 130 (256)
T PRK08017 58 E------SVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPH-GEGRIVM 130 (256)
T ss_pred H------HHHHHHHHHHHhcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCCEEEE
Confidence 5 333322 357999999986432 133556899999998776 5555555 5689999
Q ss_pred EecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEE
Q psy7538 172 ISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCM 247 (543)
Q Consensus 172 vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~ 247 (543)
+||.++...... .+.|+.||+..|.+.+.... .+++++
T Consensus 131 ~ss~~~~~~~~~--------------------------------------~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~ 172 (256)
T PRK08017 131 TSSVMGLISTPG--------------------------------------RGAYAASKYALEAWSDALRMELRHSGIKVS 172 (256)
T ss_pred EcCcccccCCCC--------------------------------------ccHHHHHHHHHHHHHHHHHHHHhhcCCEEE
Confidence 999865432110 16899999999988765322 589999
Q ss_pred EEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCc-eeEEeecCCcccccchHHHHHHHHHHHhhhhc
Q psy7538 248 ILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGV-IRSMYCKNTGMADFLPADVAINGVFLFTWDFL 315 (543)
Q Consensus 248 IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~-~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~ 315 (543)
++||+.+...... +. ..+. .......+...+++++++|+++++..++.+..
T Consensus 173 ~v~pg~~~t~~~~-------~~----------~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~ 224 (256)
T PRK08017 173 LIEPGPIRTRFTD-------NV----------NQTQSDKPVENPGIAARFTLGPEAVVPKLRHALESPK 224 (256)
T ss_pred EEeCCCcccchhh-------cc----------cchhhccchhhhHHHhhcCCCHHHHHHHHHHHHhCCC
Confidence 9999866433111 10 0000 00011122233567999999999999886554
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.5e-14 Score=142.04 Aligned_cols=208 Identities=16% Similarity=0.178 Sum_probs=136.4
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||+|+||++++++|++.|+ +|+++.|+.. .+++.. .....++.++.+|+
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~---~v~~~~r~~~------~~~~~~-------------~~~~~~~~~~~~D~ 61 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAEGA---RVAITGRDPA------SLEAAR-------------AELGESALVIRADA 61 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEecCCHH------HHHHHH-------------HHhCCceEEEEecC
Confidence 3579999999999999999999999986 7888888632 222111 01123577889999
Q ss_pred CCCCCCCCHHHHHHHh-------cCccEEEEcCccCCCc-------ccHHHHHHHHHHHHHHHHHHHHhc-cCCceEEEE
Q psy7538 108 TQLKLGISEIDKKELI-------DNVDIVYHVAATIRFD-------EPIKTAVILNTRGTRDMLELSKQM-KNLKCFTYI 172 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~v 172 (543)
++.+ +...++ .++|+|||+|+..... +.++..+++|+.|+.++++++... ....++|++
T Consensus 62 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~ 135 (249)
T PRK06500 62 GDVA------AQKALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLN 135 (249)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 9865 333332 3689999999975421 345668999999999999999752 233577887
Q ss_pred ecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEE
Q psy7538 173 STAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMI 248 (543)
Q Consensus 173 ST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~I 248 (543)
||..+.... | ..+.|+.+|+..|.+++.++. .++++.+
T Consensus 136 ~S~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~ 177 (249)
T PRK06500 136 GSINAHIGM----------P----------------------------NSSVYAASKAALLSLAKTLSGELLPRGIRVNA 177 (249)
T ss_pred echHhccCC----------C----------------------------CccHHHHHHHHHHHHHHHHHHHhhhcCeEEEE
Confidence 775332110 0 017899999999999976653 5899999
Q ss_pred EecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhh
Q psy7538 249 LRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWD 313 (543)
Q Consensus 249 lRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~ 313 (543)
+||+.++++...... ..... ...+...+..+.. ..-+..++|+++++..++..
T Consensus 178 i~pg~~~t~~~~~~~--~~~~~-~~~~~~~~~~~~~---------~~~~~~~~~va~~~~~l~~~ 230 (249)
T PRK06500 178 VSPGPVQTPLYGKLG--LPEAT-LDAVAAQIQALVP---------LGRFGTPEEIAKAVLYLASD 230 (249)
T ss_pred EeeCcCCCHHHHhhc--cCccc-hHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCc
Confidence 999999876322100 00000 0112222222211 11235789999999887754
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.3e-15 Score=144.91 Aligned_cols=222 Identities=14% Similarity=0.112 Sum_probs=144.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
.++++|+||||+|+||++++++|++.|+ +|.++.|+.. .+.+++ .+.+ .....++.++.+|+
T Consensus 3 ~~~~~vlItG~~~~iG~~la~~l~~~g~---~v~~~~~~~~-----~~~~~~-----~~~~-----~~~~~~~~~~~~Dl 64 (245)
T PRK12937 3 LSNKVAIVTGASRGIGAAIARRLAADGF---AVAVNYAGSA-----AAADEL-----VAEI-----EAAGGRAIAVQADV 64 (245)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEecCCCH-----HHHHHH-----HHHH-----HhcCCeEEEEECCC
Confidence 3679999999999999999999999987 6666666542 111111 1111 11234688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc-cCCceEEEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM-KNLKCFTYI 172 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~v 172 (543)
++++ ++.++++ ++|+|||+|+.... .+.++..+++|+.|+.++++.+.+. ..-.++|++
T Consensus 65 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ 138 (245)
T PRK12937 65 ADAA------AVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINL 138 (245)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEE
Confidence 9875 5655554 68999999997532 2345667899999999999888653 223589999
Q ss_pred ecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEE
Q psy7538 173 STAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMI 248 (543)
Q Consensus 173 ST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~I 248 (543)
||..+..... ..+.|+.+|...|.+++..+. .++.+++
T Consensus 139 ss~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~ 180 (245)
T PRK12937 139 STSVIALPLP--------------------------------------GYGPYAASKAAVEGLVHVLANELRGRGITVNA 180 (245)
T ss_pred eeccccCCCC--------------------------------------CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEE
Confidence 9874432110 016899999999999887654 4789999
Q ss_pred EecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEe
Q psy7538 249 LRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNL 328 (543)
Q Consensus 249 lRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni 328 (543)
++|+.+-.+... +. ..+ .....+.... ...-+.+++|++++++.++..... ...+.++++
T Consensus 181 i~pg~~~t~~~~------~~-~~~-~~~~~~~~~~---------~~~~~~~~~d~a~~~~~l~~~~~~---~~~g~~~~~ 240 (245)
T PRK12937 181 VAPGPVATELFF------NG-KSA-EQIDQLAGLA---------PLERLGTPEEIAAAVAFLAGPDGA---WVNGQVLRV 240 (245)
T ss_pred EEeCCccCchhc------cc-CCH-HHHHHHHhcC---------CCCCCCCHHHHHHHHHHHcCcccc---CccccEEEe
Confidence 999876544210 00 011 1222222111 111244679999998887754322 134678887
Q ss_pred ecC
Q psy7538 329 TSN 331 (543)
Q Consensus 329 ~s~ 331 (543)
.++
T Consensus 241 ~~g 243 (245)
T PRK12937 241 NGG 243 (245)
T ss_pred CCC
Confidence 654
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.2e-14 Score=143.87 Aligned_cols=192 Identities=14% Similarity=0.122 Sum_probs=133.7
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+|+|+||||||+||++++++|++.|+ +|+++.|.. ++++++.+ .+ +.. .++.++.+|+++
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~---~v~~~~r~~------~~~~~~~~-----~~-----~~~-~~~~~~~~Dl~~ 61 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA---TLGLVARRT------DALQAFAA-----RL-----PKA-ARVSVYAADVRD 61 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHHH-----hc-----ccC-CeeEEEEcCCCC
Confidence 47999999999999999999999987 788888864 22322211 01 111 278899999998
Q ss_pred CCCCCCHHHHHHHhc-------CccEEEEcCccCCC----c----ccHHHHHHHHHHHHHHHHHH----HHhccCCceEE
Q psy7538 110 LKLGISEIDKKELID-------NVDIVYHVAATIRF----D----EPIKTAVILNTRGTRDMLEL----SKQMKNLKCFT 170 (543)
Q Consensus 110 ~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~----~----~~~~~~~~~Nv~gt~~ll~~----a~~~~~l~~~V 170 (543)
++ ++.++++ .+|++||+||.... . +.++..+++|+.|+.++++. +++. +..++|
T Consensus 62 ~~------~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~-~~~~iv 134 (257)
T PRK07024 62 AD------ALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAA-RRGTLV 134 (257)
T ss_pred HH------HHHHHHHHHHHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhc-CCCEEE
Confidence 75 5555443 37999999986431 1 34567899999999998774 3443 457899
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+.... |. ...|+.||+..|.+.+..+. +++++
T Consensus 135 ~isS~~~~~~~----------~~----------------------------~~~Y~asK~a~~~~~~~l~~e~~~~gi~v 176 (257)
T PRK07024 135 GIASVAGVRGL----------PG----------------------------AGAYSASKAAAIKYLESLRVELRPAGVRV 176 (257)
T ss_pred EEechhhcCCC----------CC----------------------------CcchHHHHHHHHHHHHHHHHHhhccCcEE
Confidence 99998553211 10 15799999999999877543 58999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhh
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDF 314 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~ 314 (543)
+++||+.|.++.... + . ...-..++.+++++.++.++.+.
T Consensus 177 ~~v~Pg~v~t~~~~~------~-------------~---------~~~~~~~~~~~~a~~~~~~l~~~ 216 (257)
T PRK07024 177 VTIAPGYIRTPMTAH------N-------------P---------YPMPFLMDADRFAARAARAIARG 216 (257)
T ss_pred EEEecCCCcCchhhc------C-------------C---------CCCCCccCHHHHHHHHHHHHhCC
Confidence 999999886652110 0 0 00011367999999998887543
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.5e-15 Score=150.78 Aligned_cols=176 Identities=14% Similarity=0.171 Sum_probs=120.0
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||||+||++++++|++.|+ +|+++.|+.. +.++..+ . ..++.++.+|+
T Consensus 24 l~~k~vlITGasggIG~~~a~~L~~~G~---~Vv~~~R~~~------~~~~~~~-----~---------l~~v~~~~~Dl 80 (315)
T PRK06196 24 LSGKTAIVTGGYSGLGLETTRALAQAGA---HVIVPARRPD------VAREALA-----G---------IDGVEVVMLDL 80 (315)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHHH-----H---------hhhCeEEEccC
Confidence 4789999999999999999999999987 7888888642 2222110 0 12367899999
Q ss_pred CCCCCCCCHHHHHHHh-------cCccEEEEcCccCCC-----cccHHHHHHHHHHHHHHHHHH----HHhccCCceEEE
Q psy7538 108 TQLKLGISEIDKKELI-------DNVDIVYHVAATIRF-----DEPIKTAVILNTRGTRDMLEL----SKQMKNLKCFTY 171 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~-----~~~~~~~~~~Nv~gt~~ll~~----a~~~~~l~~~V~ 171 (543)
++++ +++.++ .++|+|||+||.... .+.++..+++|+.|+..+.+. +++. +..++|+
T Consensus 81 ~d~~------~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~~~~iV~ 153 (315)
T PRK06196 81 ADLE------SVRAFAERFLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAG-AGARVVA 153 (315)
T ss_pred CCHH------HHHHHHHHHHhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCeEEE
Confidence 9875 555544 358999999996432 234667899999996666554 4443 3469999
Q ss_pred EecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEE
Q psy7538 172 ISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCM 247 (543)
Q Consensus 172 vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~ 247 (543)
+||..........++..+..+..+ ...|+.||+..+.+.+..+. .|+.++
T Consensus 154 vSS~~~~~~~~~~~~~~~~~~~~~--------------------------~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~ 207 (315)
T PRK06196 154 LSSAGHRRSPIRWDDPHFTRGYDK--------------------------WLAYGQSKTANALFAVHLDKLGKDQGVRAF 207 (315)
T ss_pred ECCHHhccCCCCccccCccCCCCh--------------------------HHHHHHHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 999743221111110000011111 15899999999988876644 589999
Q ss_pred EEecCeeeecCC
Q psy7538 248 ILRPSIVVPIYK 259 (543)
Q Consensus 248 IlRps~V~G~~~ 259 (543)
++|||.|.++..
T Consensus 208 ~v~PG~v~t~~~ 219 (315)
T PRK06196 208 SVHPGGILTPLQ 219 (315)
T ss_pred EeeCCcccCCcc
Confidence 999999987743
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1e-14 Score=144.34 Aligned_cols=221 Identities=14% Similarity=0.185 Sum_probs=147.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+|+||||+|+||+.+++.|++.|+ +|.++.|+.+ .+++.+.+ +....++.++.+|+
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~~~G~---~v~~~~~~~~----~~~~~~~~-------------~~~~~~~~~~~~D~ 72 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALAKAGA---DIIITTHGTN----WDETRRLI-------------EKEGRKVTFVQVDL 72 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCcH----HHHHHHHH-------------HhcCCceEEEEcCC
Confidence 5789999999999999999999999987 7888888622 22232221 11224688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ ++..+++ .+|++||+|+.... .+.++..+++|+.|+..+.+.+... ++..++|
T Consensus 73 ~~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv 146 (258)
T PRK06935 73 TKPE------SAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKII 146 (258)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEE
Confidence 9875 5555554 68999999997532 2345668899999988887766531 2456899
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... ....|+.+|+..|.+++..+. +|+.+
T Consensus 147 ~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v 188 (258)
T PRK06935 147 NIASMLSFQGGK--------------------------------------FVPAYTASKHGVAGLTKAFANELAAYNIQV 188 (258)
T ss_pred EECCHHhccCCC--------------------------------------CchhhHHHHHHHHHHHHHHHHHhhhhCeEE
Confidence 999985542211 115899999999999887765 58999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
.+++|+.|..+...+.+. ... ......... ...-+...+|+++++..++..... -..+.++
T Consensus 189 ~~i~PG~v~t~~~~~~~~------~~~-~~~~~~~~~---------~~~~~~~~~dva~~~~~l~s~~~~---~~~G~~i 249 (258)
T PRK06935 189 NAIAPGYIKTANTAPIRA------DKN-RNDEILKRI---------PAGRWGEPDDLMGAAVFLASRASD---YVNGHIL 249 (258)
T ss_pred EEEEeccccccchhhccc------ChH-HHHHHHhcC---------CCCCCCCHHHHHHHHHHHcChhhc---CCCCCEE
Confidence 999999886654322111 011 111111110 112356678999998877754332 1246677
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
.+.++
T Consensus 250 ~~dgg 254 (258)
T PRK06935 250 AVDGG 254 (258)
T ss_pred EECCC
Confidence 76654
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.5e-15 Score=146.46 Aligned_cols=218 Identities=13% Similarity=0.157 Sum_probs=147.5
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||+|+||.++++.|++.|. +|.++.|+... .+...++ ...++..+.+|+
T Consensus 13 ~~~k~vlItGas~~IG~~la~~l~~~G~---~Vi~~~r~~~~---~~~~~~~----------------~~~~~~~~~~Dl 70 (255)
T PRK06841 13 LSGKVAVVTGGASGIGHAIAELFAAKGA---RVALLDRSEDV---AEVAAQL----------------LGGNAKGLVCDV 70 (255)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHh----------------hCCceEEEEecC
Confidence 4689999999999999999999999986 78888886531 1111111 113566889999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ +++.+++ ++|+|||+|+.... .+.++..+++|+.|+.++++++... .+..+||
T Consensus 71 ~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv 144 (255)
T PRK06841 71 SDSQ------SVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIV 144 (255)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEE
Confidence 9875 5555443 57999999997542 1345568999999999999998652 2457999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+.... + ....|+.+|+..+.+.+..+. .++.+
T Consensus 145 ~~sS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v 186 (255)
T PRK06841 145 NLASQAGVVAL----------E----------------------------RHVAYCASKAGVVGMTKVLALEWGPYGITV 186 (255)
T ss_pred EEcchhhccCC----------C----------------------------CCchHHHHHHHHHHHHHHHHHHHHhhCeEE
Confidence 99998543211 0 015899999999888877654 47999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
..++|+.|-.+.... .| .+ ........+. ....+.+.+|++++++.++..... ...|+++
T Consensus 187 ~~v~pg~v~t~~~~~--~~----~~--~~~~~~~~~~---------~~~~~~~~~~va~~~~~l~~~~~~---~~~G~~i 246 (255)
T PRK06841 187 NAISPTVVLTELGKK--AW----AG--EKGERAKKLI---------PAGRFAYPEEIAAAALFLASDAAA---MITGENL 246 (255)
T ss_pred EEEEeCcCcCccccc--cc----ch--hHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCcccc---CccCCEE
Confidence 999999886553210 01 00 1111111111 123578999999999988865432 1246777
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
.+.++
T Consensus 247 ~~dgg 251 (255)
T PRK06841 247 VIDGG 251 (255)
T ss_pred EECCC
Confidence 77665
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=9.6e-15 Score=143.14 Aligned_cols=219 Identities=13% Similarity=0.090 Sum_probs=139.1
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEE-ecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLL-MRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l-~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
++++||||+|+||++++++|++.|+ +|.++ .|+.. ...+...++ .....++..+.+|+++
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~---~v~~~~~~~~~--~~~~~~~~~--------------~~~~~~~~~~~~D~~d 62 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGY---TVAVNYQQNLH--AAQEVVNLI--------------TQAGGKAFVLQADISD 62 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCChH--HHHHHHHHH--------------HhCCCeEEEEEccCCC
Confidence 6899999999999999999999987 56554 34321 111111111 1112357889999998
Q ss_pred CCCCCCHHHHHHHhc-------CccEEEEcCccCCC--------cccHHHHHHHHHHHHHHHHHHHHhc------cCCce
Q psy7538 110 LKLGISEIDKKELID-------NVDIVYHVAATIRF--------DEPIKTAVILNTRGTRDMLELSKQM------KNLKC 168 (543)
Q Consensus 110 ~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~------~~l~~ 168 (543)
++ +++.+++ .+|+|||+|+.... .+..+..+++|+.|+..+++.+... .+-.+
T Consensus 63 ~~------~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~ 136 (247)
T PRK09730 63 EN------QVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGA 136 (247)
T ss_pred HH------HHHHHHHHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcE
Confidence 76 5655544 46899999996421 1234568999999998887766442 11356
Q ss_pred EEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCC
Q psy7538 169 FTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGM 244 (543)
Q Consensus 169 ~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~l 244 (543)
||++||..+.... |. ....|+.+|+..|.+++..+. .++
T Consensus 137 ~v~~sS~~~~~~~----------~~---------------------------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i 179 (247)
T PRK09730 137 IVNVSSAASRLGA----------PG---------------------------EYVDYAASKGAIDTLTTGLSLEVAAQGI 179 (247)
T ss_pred EEEECchhhccCC----------CC---------------------------cccchHhHHHHHHHHHHHHHHHHHHhCe
Confidence 9999997543211 00 014699999999988876543 489
Q ss_pred cEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCc
Q psy7538 245 PCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKS 324 (543)
Q Consensus 245 p~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~ 324 (543)
+++++||+.++++.... .+..........+... . -..+.+|++++++.++..... ...+.
T Consensus 180 ~v~~i~pg~~~~~~~~~--------~~~~~~~~~~~~~~~~-------~--~~~~~~dva~~~~~~~~~~~~---~~~g~ 239 (247)
T PRK09730 180 RVNCVRPGFIYTEMHAS--------GGEPGRVDRVKSNIPM-------Q--RGGQPEEVAQAIVWLLSDKAS---YVTGS 239 (247)
T ss_pred EEEEEEeCCCcCccccc--------CCCHHHHHHHHhcCCC-------C--CCcCHHHHHHHHHhhcChhhc---CccCc
Confidence 99999999999885321 1111122222221110 0 123689999999888765422 12466
Q ss_pred EEEeecC
Q psy7538 325 VCNLTSN 331 (543)
Q Consensus 325 vyni~s~ 331 (543)
.|++.++
T Consensus 240 ~~~~~g~ 246 (247)
T PRK09730 240 FIDLAGG 246 (247)
T ss_pred EEecCCC
Confidence 7776653
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.9e-14 Score=139.87 Aligned_cols=221 Identities=12% Similarity=0.094 Sum_probs=141.5
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||||+||++++++|++.|+ +|++..+.... ..++.++++ + ....++..+.+|+
T Consensus 1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~---~vv~~~~~~~~-~~~~~~~~~---------~-----~~~~~~~~~~~D~ 62 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKDGF---KVVAGCGPNSP-RRVKWLEDQ---------K-----ALGFDFIASEGNV 62 (246)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCC---EEEEEcCCChH-HHHHHHHHH---------H-----hcCCcEEEEEcCC
Confidence 4679999999999999999999999986 56665543211 111111111 1 1124577889999
Q ss_pred CCCCCCCCHHHHHHHh-------cCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELI-------DNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++.+ ++..++ .++|+|||+|+.... .+.+...+++|+.|+..+.+.+... .+..++|
T Consensus 63 ~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv 136 (246)
T PRK12938 63 GDWD------STKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRII 136 (246)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEE
Confidence 9875 455444 358999999997532 2345668999999977766655431 2567999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... ....|+.+|+..+.+.+.... .++++
T Consensus 137 ~isS~~~~~~~~--------------------------------------~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v 178 (246)
T PRK12938 137 NISSVNGQKGQF--------------------------------------GQTNYSTAKAGIHGFTMSLAQEVATKGVTV 178 (246)
T ss_pred EEechhccCCCC--------------------------------------CChhHHHHHHHHHHHHHHHHHHhhhhCeEE
Confidence 999975532211 016899999988887766543 58999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
.+++|+.+.++.... ..+ ..+..+... .....+...+|+++++..++..... ...++.+
T Consensus 179 ~~i~pg~~~t~~~~~--------~~~-~~~~~~~~~---------~~~~~~~~~~~v~~~~~~l~~~~~~---~~~g~~~ 237 (246)
T PRK12938 179 NTVSPGYIGTDMVKA--------IRP-DVLEKIVAT---------IPVRRLGSPDEIGSIVAWLASEESG---FSTGADF 237 (246)
T ss_pred EEEEecccCCchhhh--------cCh-HHHHHHHhc---------CCccCCcCHHHHHHHHHHHcCcccC---CccCcEE
Confidence 999999886653221 011 122222211 1123356789999998877754322 1246677
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
.+.++
T Consensus 238 ~~~~g 242 (246)
T PRK12938 238 SLNGG 242 (246)
T ss_pred EECCc
Confidence 76554
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.2e-14 Score=142.46 Aligned_cols=222 Identities=10% Similarity=0.104 Sum_probs=145.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++++++||||+|+||++++++|++.|. +|.++.|+.+ +++++. +.++ ....++.++.+|+
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~G~---~Vi~~~r~~~------~~~~~~-----~~l~-----~~~~~~~~~~~D~ 68 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEAGA---DVLIAARTES------QLDEVA-----EQIR-----AAGRRAHVVAADL 68 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHH-----HHHH-----hcCCcEEEEEccC
Confidence 4689999999999999999999999986 7888998642 121110 1111 1124688899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc----cCCceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM----KNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~l~~~ 169 (543)
++++ ++..+++ ++|+|||+|+.... .+.+...+++|+.|+.++.+++... .+..++
T Consensus 69 ~~~~------~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~i 142 (263)
T PRK07814 69 AHPE------ATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSV 142 (263)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEE
Confidence 9875 5554443 68999999986432 1345668999999999999999741 245789
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh---cCCcE
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME---LGMPC 246 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~---~~lp~ 246 (543)
|++||.++..... + .+.|+.||+..|.+++..+. .++.+
T Consensus 143 v~~sS~~~~~~~~---------~-----------------------------~~~Y~~sK~a~~~~~~~~~~e~~~~i~v 184 (263)
T PRK07814 143 INISSTMGRLAGR---------G-----------------------------FAAYGTAKAALAHYTRLAALDLCPRIRV 184 (263)
T ss_pred EEEccccccCCCC---------C-----------------------------CchhHHHHHHHHHHHHHHHHHHCCCceE
Confidence 9999975532110 0 16899999999999887665 35788
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
..++|+.|..+.... ......+... ..+. .........+|++++++.++..... ...+..+
T Consensus 185 ~~i~Pg~v~t~~~~~-------~~~~~~~~~~-~~~~--------~~~~~~~~~~~va~~~~~l~~~~~~---~~~g~~~ 245 (263)
T PRK07814 185 NAIAPGSILTSALEV-------VAANDELRAP-MEKA--------TPLRRLGDPEDIAAAAVYLASPAGS---YLTGKTL 245 (263)
T ss_pred EEEEeCCCcCchhhh-------ccCCHHHHHH-HHhc--------CCCCCCcCHHHHHHHHHHHcCcccc---CcCCCEE
Confidence 888888775432110 0000111111 1111 0112346789999999988754322 1246666
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
.+.++
T Consensus 246 ~~~~~ 250 (263)
T PRK07814 246 EVDGG 250 (263)
T ss_pred EECCC
Confidence 66544
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.1e-14 Score=140.15 Aligned_cols=218 Identities=11% Similarity=0.161 Sum_probs=143.4
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
++|+++||||+|+||++++++|++.|+ +|.+..|... ++.+.+. .....++.++.+|++
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~---~vv~~~~~~~-----~~~~~~~-------------~~~~~~~~~~~~D~~ 62 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGA---RVVVNYHQSE-----DAAEALA-------------DELGDRAIALQADVT 62 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC---eEEEEcCCCH-----HHHHHHH-------------HHhCCceEEEEcCCC
Confidence 578999999999999999999999987 6666555431 1222111 011146888999999
Q ss_pred CCCCCCCHHHHHHHhc-------C-ccEEEEcCccCC---------C----cccHHHHHHHHHHHHHHHHHHHHhc---c
Q psy7538 109 QLKLGISEIDKKELID-------N-VDIVYHVAATIR---------F----DEPIKTAVILNTRGTRDMLELSKQM---K 164 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~-------~-vd~ViH~AA~v~---------~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 164 (543)
+++ ++..+++ . +|++||+|+... + .+.+...+++|+.|+.++++++... .
T Consensus 63 ~~~------~~~~~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 136 (253)
T PRK08642 63 DRE------QVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQ 136 (253)
T ss_pred CHH------HHHHHHHHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhc
Confidence 875 5555543 2 899999997521 1 1334567999999999999998631 2
Q ss_pred CCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh---
Q psy7538 165 NLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME--- 241 (543)
Q Consensus 165 ~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~--- 241 (543)
+..++|++||....... .| .+.|+.||+..|.+++..+.
T Consensus 137 ~~g~iv~iss~~~~~~~---------~~-----------------------------~~~Y~~sK~a~~~l~~~la~~~~ 178 (253)
T PRK08642 137 GFGRIINIGTNLFQNPV---------VP-----------------------------YHDYTTAKAALLGLTRNLAAELG 178 (253)
T ss_pred CCeEEEEECCccccCCC---------CC-----------------------------ccchHHHHHHHHHHHHHHHHHhC
Confidence 45789999986432110 01 16899999999999988765
Q ss_pred -cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCC
Q psy7538 242 -LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKES 320 (543)
Q Consensus 242 -~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~ 320 (543)
.++.+..++|+.|-.+... + ..+........... ....+.+.+|+++++..++..... .
T Consensus 179 ~~~i~v~~i~pG~v~t~~~~---~-----~~~~~~~~~~~~~~---------~~~~~~~~~~va~~~~~l~~~~~~---~ 238 (253)
T PRK08642 179 PYGITVNMVSGGLLRTTDAS---A-----ATPDEVFDLIAATT---------PLRKVTTPQEFADAVLFFASPWAR---A 238 (253)
T ss_pred ccCeEEEEEeecccCCchhh---c-----cCCHHHHHHHHhcC---------CcCCCCCHHHHHHHHHHHcCchhc---C
Confidence 4788999999877543211 0 01111222221111 113478899999999888865432 1
Q ss_pred CCCcEEEeecC
Q psy7538 321 ERKSVCNLTSN 331 (543)
Q Consensus 321 ~~~~vyni~s~ 331 (543)
..|.++.+.++
T Consensus 239 ~~G~~~~vdgg 249 (253)
T PRK08642 239 VTGQNLVVDGG 249 (253)
T ss_pred ccCCEEEeCCC
Confidence 35777777654
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.8e-14 Score=142.43 Aligned_cols=228 Identities=13% Similarity=0.137 Sum_probs=144.5
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCC-CCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKK-GKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~-~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
+++|+++||||+|+||++++++|++.|+ +|+++.+... .....+++.+. ++ ....++..+.+|
T Consensus 6 l~~k~vlItGa~~gIG~~~a~~l~~~G~---~vv~i~~~~~~~~~~~~~~~~~--------l~-----~~~~~~~~~~~D 69 (257)
T PRK12744 6 LKGKVVLIAGGAKNLGGLIARDLAAQGA---KAVAIHYNSAASKADAEETVAA--------VK-----AAGAKAVAFQAD 69 (257)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC---cEEEEecCCccchHHHHHHHHH--------HH-----HhCCcEEEEecC
Confidence 4679999999999999999999999987 5556655432 22212222111 11 112367889999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc-cCCceEEE
Q psy7538 107 ITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM-KNLKCFTY 171 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~ 171 (543)
+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+..+++.+... ..-.++++
T Consensus 70 ~~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~ 143 (257)
T PRK12744 70 LTTAA------AVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVT 143 (257)
T ss_pred cCCHH------HHHHHHHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEE
Confidence 99875 5555543 58999999996421 1335668999999999999988642 22246676
Q ss_pred EecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEE
Q psy7538 172 ISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCM 247 (543)
Q Consensus 172 vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~ 247 (543)
++|..+.... | ....|+.||+..|.+.+.++. .++++.
T Consensus 144 ~~ss~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~ 185 (257)
T PRK12744 144 LVTSLLGAFT----------P----------------------------FYSAYAGSKAPVEHFTRAASKEFGARGISVT 185 (257)
T ss_pred EecchhcccC----------C----------------------------CcccchhhHHHHHHHHHHHHHHhCcCceEEE
Confidence 6433211110 0 116899999999999988765 479999
Q ss_pred EEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEE
Q psy7538 248 ILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCN 327 (543)
Q Consensus 248 IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyn 327 (543)
+++|+.|.++...+.. .+.... .... .. ...+.....+.+++|+++++..++..... ..+++++
T Consensus 186 ~v~pg~v~t~~~~~~~-------~~~~~~--~~~~-~~--~~~~~~~~~~~~~~dva~~~~~l~~~~~~----~~g~~~~ 249 (257)
T PRK12744 186 AVGPGPMDTPFFYPQE-------GAEAVA--YHKT-AA--ALSPFSKTGLTDIEDIVPFIRFLVTDGWW----ITGQTIL 249 (257)
T ss_pred EEecCccccchhcccc-------ccchhh--cccc-cc--cccccccCCCCCHHHHHHHHHHhhcccce----eecceEe
Confidence 9999998765432211 111000 0000 00 01111223578899999999988874211 2477888
Q ss_pred eecC
Q psy7538 328 LTSN 331 (543)
Q Consensus 328 i~s~ 331 (543)
+.++
T Consensus 250 ~~gg 253 (257)
T PRK12744 250 INGG 253 (257)
T ss_pred ecCC
Confidence 8776
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.6e-14 Score=143.01 Aligned_cols=224 Identities=12% Similarity=0.107 Sum_probs=144.4
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+|+||||||+||++++++|.+.|+ +|+++.|+... ....++.++.+|+
T Consensus 7 ~~~k~vlItGas~gIG~~ia~~l~~~G~---~v~~~~r~~~~-------------------------~~~~~~~~~~~D~ 58 (260)
T PRK06523 7 LAGKRALVTGGTKGIGAATVARLLEAGA---RVVTTARSRPD-------------------------DLPEGVEFVAADL 58 (260)
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHCCC---EEEEEeCChhh-------------------------hcCCceeEEecCC
Confidence 6789999999999999999999999986 78899987531 1123577899999
Q ss_pred CCCCCCCCHHHHHHHh-------cCccEEEEcCccCCC---------cccHHHHHHHHHHHHHHHHHHHHhc---cCCce
Q psy7538 108 TQLKLGISEIDKKELI-------DNVDIVYHVAATIRF---------DEPIKTAVILNTRGTRDMLELSKQM---KNLKC 168 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~---------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~ 168 (543)
++++ +++.++ ..+|+|||+|+.... .+.++..+++|+.|+.++.+.+... .+..+
T Consensus 59 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ 132 (260)
T PRK06523 59 TTAE------GCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGV 132 (260)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcE
Confidence 9875 444332 358999999985321 2346678999999998887665331 14468
Q ss_pred EEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCC
Q psy7538 169 FTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGM 244 (543)
Q Consensus 169 ~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~l 244 (543)
+|++||..+.... +.+ ...|+.+|+..|.+.+..+. .++
T Consensus 133 ii~isS~~~~~~~--------~~~-----------------------------~~~Y~~sK~a~~~l~~~~a~~~~~~gi 175 (260)
T PRK06523 133 IIHVTSIQRRLPL--------PES-----------------------------TTAYAAAKAALSTYSKSLSKEVAPKGV 175 (260)
T ss_pred EEEEecccccCCC--------CCC-----------------------------cchhHHHHHHHHHHHHHHHHHHhhcCc
Confidence 9999997553210 000 16899999999988877654 489
Q ss_pred cEEEEecCeeeecCCCCC-CCCCCCC-CchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCC
Q psy7538 245 PCMILRPSIVVPIYKEPL-PGWTDNI-NGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322 (543)
Q Consensus 245 p~~IlRps~V~G~~~~p~-~gw~d~~-~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~ 322 (543)
.+.+++|+.|..+..... +.+.+.. ..+......+.+.... ....-+...+|+++++..++..... ...
T Consensus 176 ~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~p~~~~~~~~~va~~~~~l~s~~~~---~~~ 246 (260)
T PRK06523 176 RVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGG------IPLGRPAEPEEVAELIAFLASDRAA---SIT 246 (260)
T ss_pred EEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhcc------CccCCCCCHHHHHHHHHHHhCcccc---ccc
Confidence 999999999877642110 0000000 0000111111000000 0112245679999999888754322 134
Q ss_pred CcEEEeecC
Q psy7538 323 KSVCNLTSN 331 (543)
Q Consensus 323 ~~vyni~s~ 331 (543)
++++.+.++
T Consensus 247 G~~~~vdgg 255 (260)
T PRK06523 247 GTEYVIDGG 255 (260)
T ss_pred CceEEecCC
Confidence 778888776
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.63 E-value=3.2e-14 Score=140.93 Aligned_cols=220 Identities=12% Similarity=0.152 Sum_probs=144.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||+|+||++++++|++.|+ +|+++.|+... ..++..+.+|+
T Consensus 4 l~gk~vlItGas~gIG~~ia~~l~~~G~---~Vi~~~r~~~~---------------------------~~~~~~~~~D~ 53 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAVVNRLKEEGS---NVINFDIKEPS---------------------------YNDVDYFKVDV 53 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---eEEEEeCCccc---------------------------cCceEEEEccC
Confidence 4689999999999999999999999987 78888887532 12578899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+..+++++... .+..++|
T Consensus 54 ~~~~------~i~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv 127 (258)
T PRK06398 54 SNKE------QVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVII 127 (258)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEE
Confidence 9875 5555443 58999999986432 2345667999999999998887542 2457999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh---cCCcEE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME---LGMPCM 247 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~---~~lp~~ 247 (543)
++||..+..... ....|+.+|+..|.+.+..+. .++.+.
T Consensus 128 ~isS~~~~~~~~--------------------------------------~~~~Y~~sKaal~~~~~~la~e~~~~i~vn 169 (258)
T PRK06398 128 NIASVQSFAVTR--------------------------------------NAAAYVTSKHAVLGLTRSIAVDYAPTIRCV 169 (258)
T ss_pred EeCcchhccCCC--------------------------------------CCchhhhhHHHHHHHHHHHHHHhCCCCEEE
Confidence 999975532210 016899999999999887765 248899
Q ss_pred EEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEE
Q psy7538 248 ILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCN 327 (543)
Q Consensus 248 IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyn 327 (543)
.++|+.|-.+......++..+ ..+......... .........+...+|+|++++.++..... ...+.++.
T Consensus 170 ~i~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~~~~p~eva~~~~~l~s~~~~---~~~G~~i~ 239 (258)
T PRK06398 170 AVCPGSIRTPLLEWAAELEVG-KDPEHVERKIRE------WGEMHPMKRVGKPEEVAYVVAFLASDLAS---FITGECVT 239 (258)
T ss_pred EEecCCccchHHhhhhhcccc-CChhhhHHHHHh------hhhcCCcCCCcCHHHHHHHHHHHcCcccC---CCCCcEEE
Confidence 999987755432111100000 001100000000 00111122456789999998887754322 12466776
Q ss_pred eecC
Q psy7538 328 LTSN 331 (543)
Q Consensus 328 i~s~ 331 (543)
+.++
T Consensus 240 ~dgg 243 (258)
T PRK06398 240 VDGG 243 (258)
T ss_pred ECCc
Confidence 6655
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.63 E-value=3.4e-14 Score=141.51 Aligned_cols=221 Identities=14% Similarity=0.137 Sum_probs=163.4
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|+|||||||+|++++++|+++|+ +|.+++|..+... ... ..+.+..+|+.++
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~---~v~~~~r~~~~~~----------------------~~~-~~v~~~~~d~~~~ 54 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGH---EVRAAVRNPEAAA----------------------ALA-GGVEVVLGDLRDP 54 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCC---EEEEEEeCHHHHH----------------------hhc-CCcEEEEeccCCH
Confidence 5799999999999999999999986 8999999874321 111 5789999999998
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCcccccccC
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYL 190 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i~E~~y~ 190 (543)
. .+...+++++.++++.+... .+. ........+..+..+.+. . +.++++++|...+....
T Consensus 55 ~------~l~~a~~G~~~~~~i~~~~~-~~~--~~~~~~~~~~~~~a~~a~-~-~~~~~~~~s~~~~~~~~--------- 114 (275)
T COG0702 55 K------SLVAGAKGVDGVLLISGLLD-GSD--AFRAVQVTAVVRAAEAAG-A-GVKHGVSLSVLGADAAS--------- 114 (275)
T ss_pred h------HHHHHhccccEEEEEecccc-ccc--chhHHHHHHHHHHHHHhc-C-CceEEEEeccCCCCCCC---------
Confidence 7 78999999999999998765 333 223333444444444444 2 57889999887553311
Q ss_pred CCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCCCCCCCCC
Q psy7538 191 PPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPGWTDNIN 270 (543)
Q Consensus 191 ~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~gw~d~~~ 270 (543)
+..|..+|..+|+++... +++.+++||+..+.....
T Consensus 115 -------------------------------~~~~~~~~~~~e~~l~~s---g~~~t~lr~~~~~~~~~~---------- 150 (275)
T COG0702 115 -------------------------------PSALARAKAAVEAALRSS---GIPYTTLRRAAFYLGAGA---------- 150 (275)
T ss_pred -------------------------------ccHHHHHHHHHHHHHHhc---CCCeEEEecCeeeeccch----------
Confidence 168999999999999988 899999997766554221
Q ss_pred chHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHHHHHhhhhc
Q psy7538 271 GPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEICDIGKDIVT 350 (543)
Q Consensus 271 g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~~~i~~~~G 350 (543)
. ........+.+.. ..+......+.++|++.++..++..+.. .+++|.++.+ +..+..+....+....|
T Consensus 151 -~-~~~~~~~~~~~~~--~~~~~~~~~i~~~d~a~~~~~~l~~~~~-----~~~~~~l~g~--~~~~~~~~~~~l~~~~g 219 (275)
T COG0702 151 -A-FIEAAEAAGLPVI--PRGIGRLSPIAVDDVAEALAAALDAPAT-----AGRTYELAGP--EALTLAELASGLDYTIG 219 (275)
T ss_pred -h-HHHHHHhhCCcee--cCCCCceeeeEHHHHHHHHHHHhcCCcc-----cCcEEEccCC--ceecHHHHHHHHHHHhC
Confidence 1 1223333343332 2233488999999999999888876644 4789999988 88999999999999985
Q ss_pred Cc
Q psy7538 351 SK 352 (543)
Q Consensus 351 ~~ 352 (543)
+.
T Consensus 220 r~ 221 (275)
T COG0702 220 RP 221 (275)
T ss_pred Cc
Confidence 54
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=3.4e-15 Score=149.47 Aligned_cols=158 Identities=16% Similarity=0.217 Sum_probs=117.2
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+|+|+||||||+||++++++|.+.|+ +|+++.|+.. +++++. ..++.++.+|+++
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~G~---~Vi~~~r~~~------~~~~l~----------------~~~~~~~~~Dl~d 58 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSDGW---RVFATCRKEE------DVAALE----------------AEGLEAFQLDYAE 58 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCHH------HHHHHH----------------HCCceEEEccCCC
Confidence 67999999999999999999999986 7889988742 222210 0246788999998
Q ss_pred CCCCCCHHHHHHHhc--------CccEEEEcCccCCC-------cccHHHHHHHHHHH----HHHHHHHHHhccCCceEE
Q psy7538 110 LKLGISEIDKKELID--------NVDIVYHVAATIRF-------DEPIKTAVILNTRG----TRDMLELSKQMKNLKCFT 170 (543)
Q Consensus 110 ~~lgls~~~~~~l~~--------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~g----t~~ll~~a~~~~~l~~~V 170 (543)
++ +++.+++ ++|+|||+||.... .+.++..+++|+.| ++.+++.+++. +..++|
T Consensus 59 ~~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~-~~g~iv 131 (277)
T PRK05993 59 PE------SIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQ-GQGRIV 131 (277)
T ss_pred HH------HHHHHHHHHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhc-CCCEEE
Confidence 75 4444432 57999999986532 13356689999999 66677777765 668999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||.++..... ....|+.||+..|.+.+..+. .|+.+
T Consensus 132 ~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~~~~~l~~el~~~gi~v 173 (277)
T PRK05993 132 QCSSILGLVPMK--------------------------------------YRGAYNASKFAIEGLSLTLRMELQGSGIHV 173 (277)
T ss_pred EECChhhcCCCC--------------------------------------ccchHHHHHHHHHHHHHHHHHHhhhhCCEE
Confidence 999986543211 016899999999999877542 58999
Q ss_pred EEEecCeeeec
Q psy7538 247 MILRPSIVVPI 257 (543)
Q Consensus 247 ~IlRps~V~G~ 257 (543)
++++||.|-.+
T Consensus 174 ~~v~Pg~v~T~ 184 (277)
T PRK05993 174 SLIEPGPIETR 184 (277)
T ss_pred EEEecCCccCc
Confidence 99999987544
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.6e-14 Score=142.39 Aligned_cols=227 Identities=12% Similarity=0.105 Sum_probs=142.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|+||.+++++|++.|+ +|.+..+... +.+++. .+.+. ....++..+.+|+
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~G~---~v~~~~~~~~-----~~~~~~-----~~~~~-----~~~~~~~~~~~D~ 63 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLANDGA---LVAIHYGNRK-----EEAEET-----VYEIQ-----SNGGSAFSIGANL 63 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---eEEEEcCCCH-----HHHHHH-----HHHHH-----hcCCceEEEeccc
Confidence 5689999999999999999999999987 5666543321 111111 11111 1123567888999
Q ss_pred CCCCCCCCHHHHHHHh---------cCccEEEEcCccCCC---c----ccHHHHHHHHHHHHHHHHHHHHh-ccCCceEE
Q psy7538 108 TQLKLGISEIDKKELI---------DNVDIVYHVAATIRF---D----EPIKTAVILNTRGTRDMLELSKQ-MKNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~---------~~vd~ViH~AA~v~~---~----~~~~~~~~~Nv~gt~~ll~~a~~-~~~l~~~V 170 (543)
++.+- + ....+.+. ..+|++||+||.... . +.++..+++|+.|+..+++++.. +..-.++|
T Consensus 64 ~~~~~-~-~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv 141 (252)
T PRK12747 64 ESLHG-V-EALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRII 141 (252)
T ss_pred CCHHH-H-HHHHHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEE
Confidence 88640 0 01111111 168999999996421 1 23566889999999999987765 22235999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... ....|+.||+..+.+++..+. .++++
T Consensus 142 ~isS~~~~~~~~--------------------------------------~~~~Y~~sKaa~~~~~~~la~e~~~~girv 183 (252)
T PRK12747 142 NISSAATRISLP--------------------------------------DFIAYSMTKGAINTMTFTLAKQLGARGITV 183 (252)
T ss_pred EECCcccccCCC--------------------------------------CchhHHHHHHHHHHHHHHHHHHHhHcCCEE
Confidence 999986543211 016899999999999887654 58999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
..+.|+.|.++..... . ..+ ......+. ......+..++|+++++..++..... -..+.++
T Consensus 184 n~v~Pg~v~t~~~~~~---~---~~~--~~~~~~~~--------~~~~~~~~~~~dva~~~~~l~s~~~~---~~~G~~i 244 (252)
T PRK12747 184 NAILPGFIKTDMNAEL---L---SDP--MMKQYATT--------ISAFNRLGEVEDIADTAAFLASPDSR---WVTGQLI 244 (252)
T ss_pred EEEecCCccCchhhhc---c---cCH--HHHHHHHh--------cCcccCCCCHHHHHHHHHHHcCcccc---CcCCcEE
Confidence 9999998876643210 0 011 11111110 01123467899999999887654321 1246677
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
.+.++
T Consensus 245 ~vdgg 249 (252)
T PRK12747 245 DVSGG 249 (252)
T ss_pred EecCC
Confidence 77654
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.6e-14 Score=139.79 Aligned_cols=200 Identities=12% Similarity=0.035 Sum_probs=137.6
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
++|+++||||||++|+.++++|++.|. +|+++.|+.+. .+.+.+ .++ ....++.++.+|++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~---~V~~~~r~~~~---~~~~~~--------~~~-----~~~~~~~~~~~D~~ 65 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGW---DLALVARSQDA---LEALAA--------ELR-----STGVKAAAYSIDLS 65 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHH--------HHH-----hCCCcEEEEEccCC
Confidence 468999999999999999999999986 79999997521 112211 111 11246888999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEEE
Q psy7538 109 QLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFTY 171 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~ 171 (543)
+++ ++..+++ ++|+|||+|+.... .+.++..+++|+.|+.++++.+... .+..++|+
T Consensus 66 ~~~------~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~ 139 (241)
T PRK07454 66 NPE------AIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIIN 139 (241)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 875 4554443 58999999986532 1345667899999998888776431 24578999
Q ss_pred EecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEE
Q psy7538 172 ISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCM 247 (543)
Q Consensus 172 vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~ 247 (543)
+||..+..... ....|+.+|+..+.+.+..+. .++++.
T Consensus 140 isS~~~~~~~~--------------------------------------~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~ 181 (241)
T PRK07454 140 VSSIAARNAFP--------------------------------------QWGAYCVSKAALAAFTKCLAEEERSHGIRVC 181 (241)
T ss_pred EccHHhCcCCC--------------------------------------CccHHHHHHHHHHHHHHHHHHHhhhhCCEEE
Confidence 99986543211 016899999999988876543 589999
Q ss_pred EEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhc
Q psy7538 248 ILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFL 315 (543)
Q Consensus 248 IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~ 315 (543)
++||+.+-.+..+. . ... .. ......++.+|+|++++.++..+.
T Consensus 182 ~i~pg~i~t~~~~~------~--------------~~~--~~--~~~~~~~~~~~va~~~~~l~~~~~ 225 (241)
T PRK07454 182 TITLGAVNTPLWDT------E--------------TVQ--AD--FDRSAMLSPEQVAQTILHLAQLPP 225 (241)
T ss_pred EEecCcccCCcccc------c--------------ccc--cc--cccccCCCHHHHHHHHHHHHcCCc
Confidence 99999875442110 0 000 00 001235789999999999886654
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=3.2e-14 Score=141.80 Aligned_cols=203 Identities=12% Similarity=0.043 Sum_probs=133.7
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|+||||||+||++++++|++.|. +|.+..|+.. ++++. .+.++ ....++.++.+|++++
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~---~V~~~~r~~~------~~~~~-----~~~l~-----~~~~~~~~~~~D~~~~ 61 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGW---RLALADVNEE------GGEET-----LKLLR-----EAGGDGFYQRCDVRDY 61 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHH-----HHHHH-----hcCCceEEEEccCCCH
Confidence 5899999999999999999999986 7888888642 22211 11111 1124678899999987
Q ss_pred CCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHH----HhccCCceEEEE
Q psy7538 111 KLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELS----KQMKNLKCFTYI 172 (543)
Q Consensus 111 ~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~l~~~V~v 172 (543)
+ ++..+++ .+|+|||+|+.... .+.++..+++|+.|+.++.+.+ ++. +..++|++
T Consensus 62 ~------~~~~~~~~i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~v 134 (270)
T PRK05650 62 S------QLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQ-KSGRIVNI 134 (270)
T ss_pred H------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC-CCCEEEEE
Confidence 5 5555443 68999999997542 1345567889988887766654 444 56799999
Q ss_pred ecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEE
Q psy7538 173 STAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMI 248 (543)
Q Consensus 173 ST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~I 248 (543)
||..+..... ....|+.+|+..+.+.+.... .++.+++
T Consensus 135 sS~~~~~~~~--------------------------------------~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~ 176 (270)
T PRK05650 135 ASMAGLMQGP--------------------------------------AMSSYNVAKAGVVALSETLLVELADDEIGVHV 176 (270)
T ss_pred CChhhcCCCC--------------------------------------CchHHHHHHHHHHHHHHHHHHHhcccCcEEEE
Confidence 9985543211 016899999987766655444 5899999
Q ss_pred EecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhh
Q psy7538 249 LRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWD 313 (543)
Q Consensus 249 lRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~ 313 (543)
++|+.+..+......+.. ......+.... ....++++|+|+.++.++.+
T Consensus 177 v~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~-------------~~~~~~~~~vA~~i~~~l~~ 225 (270)
T PRK05650 177 VCPSFFQTNLLDSFRGPN---PAMKAQVGKLL-------------EKSPITAADIADYIYQQVAK 225 (270)
T ss_pred EecCccccCcccccccCc---hhHHHHHHHHh-------------hcCCCCHHHHHHHHHHHHhC
Confidence 999998765433211100 00000111110 11347899999999988854
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.7e-14 Score=139.86 Aligned_cols=190 Identities=12% Similarity=0.122 Sum_probs=136.0
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+++++||||||+||++++++|++.|+ +|.++.|+. ++++++. ....++.++.+|+++
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~G~---~V~~~~r~~------~~~~~~~--------------~~~~~~~~~~~D~~~ 57 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQGW---QVIACGRNQ------SVLDELH--------------TQSANIFTLAFDVTD 57 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhCCC---EEEEEECCH------HHHHHHH--------------HhcCCCeEEEeeCCC
Confidence 36899999999999999999999986 788898863 3333321 112357889999998
Q ss_pred CCCCCCHHHHHHHhcC----ccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc-cCCceEEEEecCcc
Q psy7538 110 LKLGISEIDKKELIDN----VDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM-KNLKCFTYISTAYC 177 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~----vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~vST~y~ 177 (543)
++ +++.++++ +|+++|+|+.... .+.++..+++|+.|+.++++++... .+-.++|++||..+
T Consensus 58 ~~------~~~~~~~~~~~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~ 131 (240)
T PRK06101 58 HP------GTKAALSQLPFIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIAS 131 (240)
T ss_pred HH------HHHHHHHhcccCCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhh
Confidence 75 67776654 5899999985432 1335568999999999999998763 22357999998754
Q ss_pred ccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEEEecCe
Q psy7538 178 HPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMILRPSI 253 (543)
Q Consensus 178 ~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~IlRps~ 253 (543)
.... |. ...|+.+|+..|.+.+..+. .+++++++||+.
T Consensus 132 ~~~~----------~~----------------------------~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~ 173 (240)
T PRK06101 132 ELAL----------PR----------------------------AEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGF 173 (240)
T ss_pred ccCC----------CC----------------------------CchhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCc
Confidence 2211 10 16899999999999876542 589999999999
Q ss_pred eeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhh
Q psy7538 254 VVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDF 314 (543)
Q Consensus 254 V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~ 314 (543)
|.++..+.. .. .....++.+++|+.++.++...
T Consensus 174 i~t~~~~~~-------------------~~---------~~~~~~~~~~~a~~i~~~i~~~ 206 (240)
T PRK06101 174 VATPLTDKN-------------------TF---------AMPMIITVEQASQEIRAQLARG 206 (240)
T ss_pred CCCCCcCCC-------------------CC---------CCCcccCHHHHHHHHHHHHhcC
Confidence 877532210 00 0012478999999998888664
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=4.7e-14 Score=137.21 Aligned_cols=210 Identities=10% Similarity=0.060 Sum_probs=140.1
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
.+|+|+||||||+||++++++|++.|+ +|+++.|+.... ....++.+|++
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~---~v~~~~r~~~~~---------------------------~~~~~~~~D~~ 51 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGH---QVIGIARSAIDD---------------------------FPGELFACDLA 51 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC---EEEEEeCCcccc---------------------------cCceEEEeeCC
Confidence 578999999999999999999999986 788998875321 01246789999
Q ss_pred CCCCCCCHHHHHHHhc------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEEEE
Q psy7538 109 QLKLGISEIDKKELID------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFTYI 172 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~v 172 (543)
+++ +++.+++ ++|+|||+|+.... .+.....+++|+.|+.++.+.+... .+..++|++
T Consensus 52 ~~~------~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ 125 (234)
T PRK07577 52 DIE------QTAATLAQINEIHPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNI 125 (234)
T ss_pred CHH------HHHHHHHHHHHhCCCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEE
Confidence 875 5555544 58999999997543 1334567899999988887665431 256799999
Q ss_pred ecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEE
Q psy7538 173 STAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMI 248 (543)
Q Consensus 173 ST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~I 248 (543)
||....+.. ....|+.+|...|.+++..+. .++.+++
T Consensus 126 sS~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~ 166 (234)
T PRK07577 126 CSRAIFGAL---------------------------------------DRTSYSAAKSALVGCTRTWALELAEYGITVNA 166 (234)
T ss_pred ccccccCCC---------------------------------------CchHHHHHHHHHHHHHHHHHHHHHhhCcEEEE
Confidence 998533211 016899999999988876543 5899999
Q ss_pred EecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEe
Q psy7538 249 LRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNL 328 (543)
Q Consensus 249 lRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni 328 (543)
+||+.+..+... + ................ ........+|++++++.++..... ...+..+++
T Consensus 167 i~pg~~~t~~~~----~--~~~~~~~~~~~~~~~~---------~~~~~~~~~~~a~~~~~l~~~~~~---~~~g~~~~~ 228 (234)
T PRK07577 167 VAPGPIETELFR----Q--TRPVGSEEEKRVLASI---------PMRRLGTPEEVAAAIAFLLSDDAG---FITGQVLGV 228 (234)
T ss_pred EecCcccCcccc----c--ccccchhHHHHHhhcC---------CCCCCcCHHHHHHHHHHHhCcccC---CccceEEEe
Confidence 999988654321 0 0000001111111110 111244679999999988765432 124677877
Q ss_pred ecC
Q psy7538 329 TSN 331 (543)
Q Consensus 329 ~s~ 331 (543)
.++
T Consensus 229 ~g~ 231 (234)
T PRK07577 229 DGG 231 (234)
T ss_pred cCC
Confidence 654
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.6e-14 Score=142.68 Aligned_cols=162 Identities=14% Similarity=0.171 Sum_probs=116.6
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+++|+||||||+||+++++.|++.|+ +|+++.|.... .+.+.+. . .....++.++.+|+++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~---~v~~~~r~~~~---~~~~~~~--------~-----~~~~~~~~~~~~D~~~ 62 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH---NVIAGVQIAPQ---VTALRAE--------A-----ARRGLALRVEKLDLTD 62 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHH--------H-----HhcCCcceEEEeeCCC
Confidence 57899999999999999999999986 78888886421 1111111 1 1122358889999998
Q ss_pred CCCCCCHHHHHHHhc-CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHH----HhccCCceEEEEecCcc
Q psy7538 110 LKLGISEIDKKELID-NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELS----KQMKNLKCFTYISTAYC 177 (543)
Q Consensus 110 ~~lgls~~~~~~l~~-~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~l~~~V~vST~y~ 177 (543)
++ ++..++. ++|+|||+|+.... .+.++..+++|+.|+.++.+.+ ++. +.+++|++||..+
T Consensus 63 ~~------~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~SS~~~ 135 (257)
T PRK09291 63 AI------DRAQAAEWDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVAR-GKGKVVFTSSMAG 135 (257)
T ss_pred HH------HHHHHhcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEEcChhh
Confidence 75 6777666 89999999986432 1335567889999887766544 444 5589999999754
Q ss_pred ccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEEEecCe
Q psy7538 178 HPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMILRPSI 253 (543)
Q Consensus 178 ~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~IlRps~ 253 (543)
.... | ....|+.+|...|.+.+.... .|++++++||+.
T Consensus 136 ~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~ 177 (257)
T PRK09291 136 LITG----------P----------------------------FTGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGP 177 (257)
T ss_pred ccCC----------C----------------------------CcchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCc
Confidence 3211 0 016899999999998876543 589999999987
Q ss_pred ee
Q psy7538 254 VV 255 (543)
Q Consensus 254 V~ 255 (543)
+.
T Consensus 178 ~~ 179 (257)
T PRK09291 178 YL 179 (257)
T ss_pred cc
Confidence 63
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=3.2e-14 Score=140.36 Aligned_cols=222 Identities=13% Similarity=0.092 Sum_probs=146.9
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|+||++++++|++.|+ +|++..|+.. +++++ .+.++ ....++..+.+|+
T Consensus 7 l~~k~~lItGas~giG~~ia~~L~~~G~---~vvl~~r~~~------~~~~~-----~~~l~-----~~~~~~~~~~~Dl 67 (254)
T PRK08085 7 LAGKNILITGSAQGIGFLLATGLAEYGA---EIIINDITAE------RAELA-----VAKLR-----QEGIKAHAAPFNV 67 (254)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCC---EEEEEcCCHH------HHHHH-----HHHHH-----hcCCeEEEEecCC
Confidence 4689999999999999999999999986 7888888642 22211 11111 1124677889999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ +++.+++ .+|+|||+|+.... .+.++..+++|+.|+..+++.+... ++..++|
T Consensus 68 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv 141 (254)
T PRK08085 68 THKQ------EVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKII 141 (254)
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEE
Confidence 9876 5555443 48999999986432 2446678999999999888877652 2457899
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... ....|+.+|+..|.+++..+. +|+.+
T Consensus 142 ~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v 183 (254)
T PRK08085 142 NICSMQSELGRD--------------------------------------TITPYAASKGAVKMLTRGMCVELARHNIQV 183 (254)
T ss_pred EEccchhccCCC--------------------------------------CCcchHHHHHHHHHHHHHHHHHHHhhCeEE
Confidence 999974421110 016899999999999988754 58999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
..++|+.+..+...+..+ ...+...+... .....+...+|+++++..++..... ...+.+.
T Consensus 184 ~~v~pG~~~t~~~~~~~~-------~~~~~~~~~~~---------~p~~~~~~~~~va~~~~~l~~~~~~---~i~G~~i 244 (254)
T PRK08085 184 NGIAPGYFKTEMTKALVE-------DEAFTAWLCKR---------TPAARWGDPQELIGAAVFLSSKASD---FVNGHLL 244 (254)
T ss_pred EEEEeCCCCCcchhhhcc-------CHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCcccc---CCcCCEE
Confidence 999999887764332111 11111111111 1123356789999988877764332 1245555
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
.+.++
T Consensus 245 ~~dgg 249 (254)
T PRK08085 245 FVDGG 249 (254)
T ss_pred EECCC
Confidence 55443
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.5e-14 Score=139.98 Aligned_cols=214 Identities=11% Similarity=0.071 Sum_probs=144.7
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||||+||++++++|++.|+ +|+++.|+.... . ...++.++.+|+
T Consensus 4 ~~~k~~lItGas~gIG~~la~~l~~~g~---~v~~~~r~~~~~-----------------------~-~~~~~~~~~~D~ 56 (252)
T PRK07856 4 LTGRVVLVTGGTRGIGAGIARAFLAAGA---TVVVCGRRAPET-----------------------V-DGRPAEFHAADV 56 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCChhhh-----------------------h-cCCceEEEEccC
Confidence 4789999999999999999999999986 788888865320 0 123678899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHh-c---cCCceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQ-M---KNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-~---~~l~~~ 169 (543)
++++ +++.+++ ++|+|||+|+.... .+.++..+++|+.|+.++++.+.. + ++..++
T Consensus 57 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~i 130 (252)
T PRK07856 57 RDPD------QVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSI 130 (252)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEE
Confidence 9875 5555544 46999999986432 133566899999999999998865 1 133689
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh---cCCcE
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME---LGMPC 246 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~---~~lp~ 246 (543)
|++||..+..... ....|+.+|+..|.+++..+. ..+.+
T Consensus 131 i~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~l~~~la~e~~~~i~v 172 (252)
T PRK07856 131 VNIGSVSGRRPSP--------------------------------------GTAAYGAAKAGLLNLTRSLAVEWAPKVRV 172 (252)
T ss_pred EEEcccccCCCCC--------------------------------------CCchhHHHHHHHHHHHHHHHHHhcCCeEE
Confidence 9999985532210 016899999999999987765 23788
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
..++|+.|..+.... ..+............ ....+...+|++++++.++..... -..+..+
T Consensus 173 ~~i~Pg~v~t~~~~~-------~~~~~~~~~~~~~~~---------~~~~~~~p~~va~~~~~L~~~~~~---~i~G~~i 233 (252)
T PRK07856 173 NAVVVGLVRTEQSEL-------HYGDAEGIAAVAATV---------PLGRLATPADIAWACLFLASDLAS---YVSGANL 233 (252)
T ss_pred EEEEeccccChHHhh-------hccCHHHHHHHhhcC---------CCCCCcCHHHHHHHHHHHcCcccC---CccCCEE
Confidence 889998876543211 011111111111111 112345679999998887754321 1357788
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
.+.++
T Consensus 234 ~vdgg 238 (252)
T PRK07856 234 EVHGG 238 (252)
T ss_pred EECCC
Confidence 88766
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=4.4e-14 Score=138.34 Aligned_cols=220 Identities=14% Similarity=0.169 Sum_probs=144.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEE-ecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLL-MRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l-~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
+.+++|+||||||+||+++++.|++.|+ +|+++ .|+... .+.+.+ .+ .....++.++.+|
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~---~v~~~~~r~~~~---~~~~~~--------~~-----~~~~~~~~~~~~D 63 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKEGA---KVVIAYDINEEA---AQELLE--------EI-----KEEGGDAIAVKAD 63 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEcCCCHHH---HHHHHH--------HH-----HhcCCeEEEEECC
Confidence 4578999999999999999999999986 67777 775321 111111 11 1112468899999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceE
Q psy7538 107 ITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCF 169 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~ 169 (543)
+++++ ++..+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .+.+++
T Consensus 64 ~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~ 137 (247)
T PRK05565 64 VSSEE------DVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVI 137 (247)
T ss_pred CCCHH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEE
Confidence 99876 5555443 79999999997632 1335668999999998888887642 145679
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+..... . ...|+.+|...+.++..... .+++
T Consensus 138 v~~sS~~~~~~~~----------~----------------------------~~~y~~sK~a~~~~~~~~~~~~~~~gi~ 179 (247)
T PRK05565 138 VNISSIWGLIGAS----------C----------------------------EVLYSASKGAVNAFTKALAKELAPSGIR 179 (247)
T ss_pred EEECCHhhccCCC----------C----------------------------ccHHHHHHHHHHHHHHHHHHHHHHcCeE
Confidence 9999975432110 0 05799999888877766544 5899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
++++||+.+-.+..... .+. ....... ......+...+|++++++.++..... . ..+++
T Consensus 180 ~~~v~pg~v~t~~~~~~--------~~~-~~~~~~~---------~~~~~~~~~~~~va~~~~~l~~~~~~-~--~~g~~ 238 (247)
T PRK05565 180 VNAVAPGAIDTEMWSSF--------SEE-DKEGLAE---------EIPLGRLGKPEEIAKVVLFLASDDAS-Y--ITGQI 238 (247)
T ss_pred EEEEEECCccCcccccc--------ChH-HHHHHHh---------cCCCCCCCCHHHHHHHHHHHcCCccC-C--ccCcE
Confidence 99999998755432211 111 1111111 01123456889999998888765432 1 34777
Q ss_pred EEeecC
Q psy7538 326 CNLTSN 331 (543)
Q Consensus 326 yni~s~ 331 (543)
+++..+
T Consensus 239 ~~~~~~ 244 (247)
T PRK05565 239 ITVDGG 244 (247)
T ss_pred EEecCC
Confidence 777654
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.2e-14 Score=143.15 Aligned_cols=194 Identities=12% Similarity=0.074 Sum_probs=133.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++++++||||||.||++++++|++.|+ +|.+..|+.. +++++. ....++.++.+|+
T Consensus 3 ~~~~~ilVtGasggiG~~la~~l~~~G~---~v~~~~r~~~------~~~~~~--------------~~~~~~~~~~~D~ 59 (273)
T PRK07825 3 LRGKVVAITGGARGIGLATARALAALGA---RVAIGDLDEA------LAKETA--------------AELGLVVGGPLDV 59 (273)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEECCHH------HHHHHH--------------HHhccceEEEccC
Confidence 4578999999999999999999999986 6788888642 222211 0012477889999
Q ss_pred CCCCCCCCHHHHHHHh-------cCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELI-------DNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ +++.++ .++|++||+||.... .+.+...+++|+.|+.++.+.+... .+..++|
T Consensus 60 ~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv 133 (273)
T PRK07825 60 TDPA------SFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVV 133 (273)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 9875 444333 358999999997532 1335668899999998887776431 2567899
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... . ...|+.||+..+.+.+.... .|+++
T Consensus 134 ~isS~~~~~~~~---------~-----------------------------~~~Y~asKaa~~~~~~~l~~el~~~gi~v 175 (273)
T PRK07825 134 NVASLAGKIPVP---------G-----------------------------MATYCASKHAVVGFTDAARLELRGTGVHV 175 (273)
T ss_pred EEcCccccCCCC---------C-----------------------------CcchHHHHHHHHHHHHHHHHHhhccCcEE
Confidence 999986543211 0 16799999877766655433 58999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhc
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFL 315 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~ 315 (543)
++++|+.|-.+... +. ........++++|+|++++.++.+..
T Consensus 176 ~~v~Pg~v~t~~~~---------------------~~------~~~~~~~~~~~~~va~~~~~~l~~~~ 217 (273)
T PRK07825 176 SVVLPSFVNTELIA---------------------GT------GGAKGFKNVEPEDVAAAIVGTVAKPR 217 (273)
T ss_pred EEEeCCcCcchhhc---------------------cc------ccccCCCCCCHHHHHHHHHHHHhCCC
Confidence 99999876332110 00 01112346899999999998886643
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=5.6e-14 Score=137.53 Aligned_cols=217 Identities=12% Similarity=0.117 Sum_probs=144.5
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+++||||+|+||++++++|++.|+ +|+++.|+.. .. ...+.+. + .....++.++.+|++++
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~---~vi~~~r~~~-~~-~~~~~~~--------~-----~~~~~~~~~~~~D~~~~ 64 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGY---RVIATYFSGN-DC-AKDWFEE--------Y-----GFTEDQVRLKELDVTDT 64 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCC---EEEEEeCCcH-HH-HHHHHHH--------h-----hccCCeEEEEEcCCCCH
Confidence 5899999999999999999999986 8899988753 11 1111110 0 11234688999999987
Q ss_pred CCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHH----HhccCCceEEEE
Q psy7538 111 KLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELS----KQMKNLKCFTYI 172 (543)
Q Consensus 111 ~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~l~~~V~v 172 (543)
+ ++..+++ .+|+|||+|+.... .+.++..+++|+.|+.++.+.+ ++. +..+||++
T Consensus 65 ~------~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~i 137 (245)
T PRK12824 65 E------ECAEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQ-GYGRIINI 137 (245)
T ss_pred H------HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-CCeEEEEE
Confidence 5 4544443 58999999986531 2345668899999998885544 443 56799999
Q ss_pred ecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEE
Q psy7538 173 STAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMI 248 (543)
Q Consensus 173 ST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~I 248 (543)
||..+..... . ...|+.+|+..+.+++..+. .++++.+
T Consensus 138 ss~~~~~~~~----------~----------------------------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~ 179 (245)
T PRK12824 138 SSVNGLKGQF----------G----------------------------QTNYSAAKAGMIGFTKALASEGARYGITVNC 179 (245)
T ss_pred CChhhccCCC----------C----------------------------ChHHHHHHHHHHHHHHHHHHHHHHhCeEEEE
Confidence 9985542211 0 15799999988888776553 4899999
Q ss_pred EecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEe
Q psy7538 249 LRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNL 328 (543)
Q Consensus 249 lRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni 328 (543)
++|+.+.++..+.. .+ ......... .....+..++++++++..++..... ...++++++
T Consensus 180 v~pg~~~t~~~~~~--------~~-~~~~~~~~~---------~~~~~~~~~~~va~~~~~l~~~~~~---~~~G~~~~~ 238 (245)
T PRK12824 180 IAPGYIATPMVEQM--------GP-EVLQSIVNQ---------IPMKRLGTPEEIAAAVAFLVSEAAG---FITGETISI 238 (245)
T ss_pred EEEcccCCcchhhc--------CH-HHHHHHHhc---------CCCCCCCCHHHHHHHHHHHcCcccc---CccCcEEEE
Confidence 99998876543221 11 121111111 1123355789999998877744322 135789998
Q ss_pred ecC
Q psy7538 329 TSN 331 (543)
Q Consensus 329 ~s~ 331 (543)
+++
T Consensus 239 ~~g 241 (245)
T PRK12824 239 NGG 241 (245)
T ss_pred CCC
Confidence 877
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.7e-14 Score=141.29 Aligned_cols=217 Identities=12% Similarity=0.116 Sum_probs=140.8
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++++++||||||+||+++++.|++.|+ .|.+..|.. ++++++.+ ....++.++.+|+
T Consensus 4 ~~~~~vlItGa~g~iG~~la~~l~~~g~---~v~~~~~~~------~~~~~~~~-------------~~~~~~~~~~~D~ 61 (245)
T PRK12936 4 LSGRKALVTGASGGIGEEIARLLHAQGA---IVGLHGTRV------EKLEALAA-------------ELGERVKIFPANL 61 (245)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEcCCH------HHHHHHHH-------------HhCCceEEEEccC
Confidence 3678999999999999999999999986 676666643 22222110 1123678889999
Q ss_pred CCCCCCCCHHHHHHHh-------cCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELI-------DNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++.+ +++.++ .++|+|||+|+.... .+.++..+++|+.|+.++++++.+. .+..+||
T Consensus 62 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv 135 (245)
T PRK12936 62 SDRD------EVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRII 135 (245)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEE
Confidence 9875 455443 358999999997532 2446678999999999998877532 2457899
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... ....|+.+|+..+.+++..+. .++++
T Consensus 136 ~~sS~~~~~~~~--------------------------------------~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v 177 (245)
T PRK12936 136 NITSVVGVTGNP--------------------------------------GQANYCASKAGMIGFSKSLAQEIATRNVTV 177 (245)
T ss_pred EECCHHhCcCCC--------------------------------------CCcchHHHHHHHHHHHHHHHHHhhHhCeEE
Confidence 999974432110 015799999977777665443 47999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
++++|+.+..+.... ..+. . .....+. .....+...+|+++++..++..... ...++++
T Consensus 178 ~~i~pg~~~t~~~~~--------~~~~-~-~~~~~~~--------~~~~~~~~~~~ia~~~~~l~~~~~~---~~~G~~~ 236 (245)
T PRK12936 178 NCVAPGFIESAMTGK--------LNDK-Q-KEAIMGA--------IPMKRMGTGAEVASAVAYLASSEAA---YVTGQTI 236 (245)
T ss_pred EEEEECcCcCchhcc--------cChH-H-HHHHhcC--------CCCCCCcCHHHHHHHHHHHcCcccc---CcCCCEE
Confidence 999999764432211 0000 0 0000110 1122355689999999877644321 1357889
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
++.++
T Consensus 237 ~~~~g 241 (245)
T PRK12936 237 HVNGG 241 (245)
T ss_pred EECCC
Confidence 98876
|
|
| >KOG1372|consensus | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.1e-14 Score=135.52 Aligned_cols=267 Identities=19% Similarity=0.199 Sum_probs=188.9
Q ss_pred hhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEE
Q psy7538 24 IAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVI 103 (543)
Q Consensus 24 i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i 103 (543)
...|-..|..||||-||.=|+.|+|-||..|+ +|..++|..+.-+ .+|++.+..+|.- .........
T Consensus 22 ~~~~r~rkvALITGItGQDGSYLaEfLL~KgY---eVHGiiRRsSsFN-T~RIeHlY~nP~~---------h~~~~mkLH 88 (376)
T KOG1372|consen 22 LGAFRPRKVALITGITGQDGSYLAEFLLSKGY---EVHGIIRRSSSFN-TARIEHLYSNPHT---------HNGASMKLH 88 (376)
T ss_pred ccCcccceEEEEecccCCCchHHHHHHHhCCc---eeeEEEeeccccc-hhhhhhhhcCchh---------cccceeEEe
Confidence 34444556889999999999999999999998 7889999876654 5789888776542 223577889
Q ss_pred EccCCCCCCCCCHHHHHHHhc--CccEEEEcCccCC----CcccHHHHHHHHHHHHHHHHHHHHhcc--CCceEEEEecC
Q psy7538 104 SGDITQLKLGISEIDKKELID--NVDIVYHVAATIR----FDEPIKTAVILNTRGTRDMLELSKQMK--NLKCFTYISTA 175 (543)
Q Consensus 104 ~gDl~~~~lgls~~~~~~l~~--~vd~ViH~AA~v~----~~~~~~~~~~~Nv~gt~~ll~~a~~~~--~l~~~V~vST~ 175 (543)
.||++|.. .+.++++ +++-|+|+||..+ |+-+ +...++.-.||.+||++.+.|. .--+|-..||.
T Consensus 89 YgDmTDss------~L~k~I~~ikPtEiYnLaAQSHVkvSFdlp-eYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstS 161 (376)
T KOG1372|consen 89 YGDMTDSS------CLIKLISTIKPTEVYNLAAQSHVKVSFDLP-EYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTS 161 (376)
T ss_pred eccccchH------HHHHHHhccCchhhhhhhhhcceEEEeecc-cceeeccchhhhhHHHHHHhcCcccceeEEecccH
Confidence 99999986 5777777 5789999999764 3322 3356778889999999999983 12378888888
Q ss_pred --ccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecC
Q psy7538 176 --YCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPS 252 (543)
Q Consensus 176 --y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps 252 (543)
|+-....+..|. .|+-|+ ++|+.+|..+-.++..+.+ +++=. ..
T Consensus 162 ElyGkv~e~PQsE~---TPFyPR--------------------------SPYa~aKmy~~WivvNyREAYnmfA----cN 208 (376)
T KOG1372|consen 162 ELYGKVQEIPQSET---TPFYPR--------------------------SPYAAAKMYGYWIVVNYREAYNMFA----CN 208 (376)
T ss_pred hhcccccCCCcccC---CCCCCC--------------------------ChhHHhhhhheEEEEEhHHhhccee----ec
Confidence 443333344443 344343 8999999999888877776 44322 23
Q ss_pred eeeecCCCCCCCCCCCCCc--hHHHHHHHhcCcee-EEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEee
Q psy7538 253 IVVPIYKEPLPGWTDNING--PTGLLIGAGKGVIR-SMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLT 329 (543)
Q Consensus 253 ~V~G~~~~p~~gw~d~~~g--~~~~~~~~~~g~~~-~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~ 329 (543)
.|.-....|..|- |+-. .+.-+..+..|... ...|+-+..+||-|..|-++|+...+.+.. +.-|.++
T Consensus 209 GILFNHESPRRGe--nFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~dYVEAMW~mLQ~d~-------PdDfViA 279 (376)
T KOG1372|consen 209 GILFNHESPRRGE--NFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAGDYVEAMWLMLQQDS-------PDDFVIA 279 (376)
T ss_pred cEeecCCCCcccc--chhhHHHHHHHHHhhhcceeeEEecchhhhcccchhHHHHHHHHHHHhcCC-------CCceEEe
Confidence 3334445555442 3211 11223333334432 346888999999999999999998887654 3468899
Q ss_pred cCCCCcccHHHHHHHHhhhhcCccC
Q psy7538 330 SNKDYKITWQEICDIGKDIVTSKIP 354 (543)
Q Consensus 330 s~~~~~~t~~e~~~~i~~~~G~~~p 354 (543)
++ +..|.+||++......|....
T Consensus 280 Tg--e~hsVrEF~~~aF~~ig~~l~ 302 (376)
T KOG1372|consen 280 TG--EQHSVREFCNLAFAEIGEVLN 302 (376)
T ss_pred cC--CcccHHHHHHHHHHhhCcEEe
Confidence 98 889999999998888864433
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=8.2e-14 Score=135.69 Aligned_cols=214 Identities=11% Similarity=0.128 Sum_probs=145.7
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|+||++++++|++.|+ +|+++.|+... ....++.++.+|+
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~~~G~---~v~~~~r~~~~-------------------------~~~~~~~~~~~D~ 54 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFLAQGA---QVYGVDKQDKP-------------------------DLSGNFHFLQLDL 54 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHCCC---EEEEEeCCccc-------------------------ccCCcEEEEECCh
Confidence 5789999999999999999999999987 78888886432 1123578889999
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCccCC----C----cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEEEEecCc
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAATIR----F----DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFTYISTAY 176 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~vST~y 176 (543)
+++ .++..+....+|+|||+|+... + .+.++..+++|+.|+.++++++... .+-.++|++||..
T Consensus 55 ~~~-----~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~ 129 (235)
T PRK06550 55 SDD-----LEPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIA 129 (235)
T ss_pred HHH-----HHHHHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChh
Confidence 876 1234444567999999998532 1 2345668999999999999988642 1346899999986
Q ss_pred cccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEEEecC
Q psy7538 177 CHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMILRPS 252 (543)
Q Consensus 177 ~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~IlRps 252 (543)
+..... ....|+.+|+..+.+.+..+. .++++++++|+
T Consensus 130 ~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg 171 (235)
T PRK06550 130 SFVAGG--------------------------------------GGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPG 171 (235)
T ss_pred hccCCC--------------------------------------CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeC
Confidence 543211 015899999998888776554 58999999999
Q ss_pred eeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecC
Q psy7538 253 IVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSN 331 (543)
Q Consensus 253 ~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~ 331 (543)
.|.++.... .+. ............ ....+...+|+|++++.++..... ...+.++.+.++
T Consensus 172 ~v~t~~~~~--~~~-----~~~~~~~~~~~~---------~~~~~~~~~~~a~~~~~l~s~~~~---~~~g~~~~~~gg 231 (235)
T PRK06550 172 AVKTPMTAA--DFE-----PGGLADWVARET---------PIKRWAEPEEVAELTLFLASGKAD---YMQGTIVPIDGG 231 (235)
T ss_pred CccCccccc--ccC-----chHHHHHHhccC---------CcCCCCCHHHHHHHHHHHcChhhc---cCCCcEEEECCc
Confidence 987664321 110 111211221111 123356789999999988855432 124667766554
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.9e-14 Score=140.48 Aligned_cols=228 Identities=15% Similarity=0.157 Sum_probs=146.8
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++++++||||+|+||++++++|++.|+ +|+++.|+.. ..+..+++ . ....++.++.+|+
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~G~---~Vv~~~r~~~---~~~~~~~~---------~-----~~~~~~~~~~~Dl 63 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARHGA---NLILLDISPE---IEKLADEL---------C-----GRGHRCTAVVADV 63 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEecCCHH---HHHHHHHH---------H-----HhCCceEEEECCC
Confidence 5689999999999999999999999987 7888888642 11111111 1 1124677899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ +++.+++ .+|+|||+|+.... .+.++..+++|+.|+.++++.+... .+..++|
T Consensus 64 ~~~~------~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv 137 (263)
T PRK08226 64 RDPA------SVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIV 137 (263)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 9875 5555544 57999999996532 1234557899999999999887642 2456899
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... + ....|+.+|+..|.+++..+. .++.+
T Consensus 138 ~isS~~~~~~~~---------~----------------------------~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v 180 (263)
T PRK08226 138 MMSSVTGDMVAD---------P----------------------------GETAYALTKAAIVGLTKSLAVEYAQSGIRV 180 (263)
T ss_pred EECcHHhcccCC---------C----------------------------CcchHHHHHHHHHHHHHHHHHHhcccCcEE
Confidence 999975431100 0 015899999999998887664 47999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
..++|+.|.++..+...++... ..+...+..+..+. ....+.+.+|++++++.++..... ...++++
T Consensus 181 ~~i~pg~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~---------p~~~~~~~~~va~~~~~l~~~~~~---~~~g~~i 247 (263)
T PRK08226 181 NAICPGYVRTPMAESIARQSNP-EDPESVLTEMAKAI---------PLRRLADPLEVGELAAFLASDESS---YLTGTQN 247 (263)
T ss_pred EEEecCcccCHHHHhhhhhccC-CCcHHHHHHHhccC---------CCCCCCCHHHHHHHHHHHcCchhc---CCcCceE
Confidence 9999999877643221111000 01111222222211 112346889999988877644321 1245566
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
-+.++
T Consensus 248 ~~dgg 252 (263)
T PRK08226 248 VIDGG 252 (263)
T ss_pred eECCC
Confidence 55544
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.9e-14 Score=137.49 Aligned_cols=214 Identities=13% Similarity=0.084 Sum_probs=143.0
Q ss_pred EEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCCCCC
Q psy7538 34 FLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQLKLG 113 (543)
Q Consensus 34 lITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~~lg 113 (543)
+||||+|+||+.++++|++.|+ +|+++.|+. ++++++. +.++ ...+++++.+|+++++
T Consensus 1 lItGas~~iG~~~a~~l~~~G~---~v~~~~r~~------~~~~~~~-----~~~~------~~~~~~~~~~Dl~~~~-- 58 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGA---RVTIASRSR------DRLAAAA-----RALG------GGAPVRTAALDITDEA-- 58 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHH-----HHHh------cCCceEEEEccCCCHH--
Confidence 5999999999999999999986 788888863 2222211 0111 1246788999999876
Q ss_pred CCHHHHHHHhc---CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCc
Q psy7538 114 ISEIDKKELID---NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKV 183 (543)
Q Consensus 114 ls~~~~~~l~~---~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~ 183 (543)
++..+++ .+|++||+|+.... .+.....+++|+.++.+++++... .+..++|++||..+.....
T Consensus 59 ----~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~g~iv~~ss~~~~~~~~- 132 (230)
T PRK07041 59 ----AVDAFFAEAGPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARI-APGGSLTFVSGFAAVRPSA- 132 (230)
T ss_pred ----HHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhh-cCCeEEEEECchhhcCCCC-
Confidence 6776665 47999999986432 234567899999999999995544 3668999999986643211
Q ss_pred ccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh--cCCcEEEEecCeeeecCCCC
Q psy7538 184 LEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME--LGMPCMILRPSIVVPIYKEP 261 (543)
Q Consensus 184 i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~--~~lp~~IlRps~V~G~~~~p 261 (543)
+ -+.|+.+|+..|.+++..+. .++.+..++|+.+-.+....
T Consensus 133 --------~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~irv~~i~pg~~~t~~~~~ 175 (230)
T PRK07041 133 --------S-----------------------------GVLQGAINAALEALARGLALELAPVRVNTVSPGLVDTPLWSK 175 (230)
T ss_pred --------c-----------------------------chHHHHHHHHHHHHHHHHHHHhhCceEEEEeecccccHHHHh
Confidence 0 16899999999999988765 45788888888774432111
Q ss_pred CCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecC
Q psy7538 262 LPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSN 331 (543)
Q Consensus 262 ~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~ 331 (543)
.+ . .....++........ ..-+...+|+|+++..++..... .+++|++.++
T Consensus 176 ~~---~--~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~-----~G~~~~v~gg 226 (230)
T PRK07041 176 LA---G--DAREAMFAAAAERLP---------ARRVGQPEDVANAILFLAANGFT-----TGSTVLVDGG 226 (230)
T ss_pred hh---c--cchHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhcCCCc-----CCcEEEeCCC
Confidence 00 0 001112222221111 01134579999999988865432 4789998876
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.61 E-value=6.9e-14 Score=138.13 Aligned_cols=221 Identities=14% Similarity=0.086 Sum_probs=146.9
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||+|+||++++++|++.|. +|+++.|.... .+++.+. ++ ....++.++.+|+
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~G~---~vv~~~r~~~~---~~~~~~~--------l~-----~~~~~~~~~~~D~ 69 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATAGA---SVVVSDINADA---ANHVVDE--------IQ-----QLGGQAFACRCDI 69 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC---eEEEEeCCHHH---HHHHHHH--------HH-----hcCCcEEEEEccC
Confidence 4689999999999999999999999986 67788775421 1222111 11 1123677889999
Q ss_pred CCCCCCCCHHHHHHHh-------cCccEEEEcCccCCC---c---ccHHHHHHHHHHHHHHHHHHHHhc---cCCceEEE
Q psy7538 108 TQLKLGISEIDKKELI-------DNVDIVYHVAATIRF---D---EPIKTAVILNTRGTRDMLELSKQM---KNLKCFTY 171 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~---~---~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~ 171 (543)
++++ ++..++ .++|+|||+||.... + +.++..+++|+.|+.++++++... .+..++|+
T Consensus 70 ~~~~------~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~ 143 (255)
T PRK06113 70 TSEQ------ELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILT 143 (255)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEE
Confidence 9875 454433 357999999996532 2 345567999999999999998631 13458999
Q ss_pred EecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEE
Q psy7538 172 ISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCM 247 (543)
Q Consensus 172 vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~ 247 (543)
+||..+..... ....|+.+|+..+.+++..+. .++.+.
T Consensus 144 isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~ 185 (255)
T PRK06113 144 ITSMAAENKNI--------------------------------------NMTSYASSKAAASHLVRNMAFDLGEKNIRVN 185 (255)
T ss_pred EecccccCCCC--------------------------------------CcchhHHHHHHHHHHHHHHHHHhhhhCeEEE
Confidence 99986532110 116899999999999987654 478899
Q ss_pred EEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEE
Q psy7538 248 ILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCN 327 (543)
Q Consensus 248 IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyn 327 (543)
++.|+.+-.+... ....+ .......+. .....+...+|++++++.++..... -..+++++
T Consensus 186 ~v~pg~~~t~~~~-------~~~~~-~~~~~~~~~---------~~~~~~~~~~d~a~~~~~l~~~~~~---~~~G~~i~ 245 (255)
T PRK06113 186 GIAPGAILTDALK-------SVITP-EIEQKMLQH---------TPIRRLGQPQDIANAALFLCSPAAS---WVSGQILT 245 (255)
T ss_pred EEecccccccccc-------cccCH-HHHHHHHhc---------CCCCCCcCHHHHHHHHHHHcCcccc---CccCCEEE
Confidence 9999977543211 00111 111111111 1112356889999999988754322 12577888
Q ss_pred eecC
Q psy7538 328 LTSN 331 (543)
Q Consensus 328 i~s~ 331 (543)
+.++
T Consensus 246 ~~gg 249 (255)
T PRK06113 246 VSGG 249 (255)
T ss_pred ECCC
Confidence 8776
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.1e-14 Score=139.09 Aligned_cols=217 Identities=13% Similarity=0.151 Sum_probs=144.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++++++||||+|+||..+++.|++.|. +|+++.|+.. ++++.. +.++ ....++.++.+|+
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~---~vi~~~r~~~------~~~~~~-----~~~~-----~~~~~~~~~~~D~ 63 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQKGA---KLALIDLNQE------KLEEAV-----AECG-----ALGTEVRGYAANV 63 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHH-----HHHH-----hcCCceEEEEcCC
Confidence 4689999999999999999999999986 7888888642 222111 0111 1124678899999
Q ss_pred CCCCCCCCHHHHHHHh-------cCccEEEEcCccCCC----------------cccHHHHHHHHHHHHHHHHHHHHh--
Q psy7538 108 TQLKLGISEIDKKELI-------DNVDIVYHVAATIRF----------------DEPIKTAVILNTRGTRDMLELSKQ-- 162 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~----------------~~~~~~~~~~Nv~gt~~ll~~a~~-- 162 (543)
++++ +++.++ ..+|+|||+|+.... .+.+...+++|+.|+..+.+.+..
T Consensus 64 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l 137 (253)
T PRK08217 64 TDEE------DVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKM 137 (253)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 9865 343333 347999999985321 133455788999999887765543
Q ss_pred --ccCCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHh
Q psy7538 163 --MKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECM 240 (543)
Q Consensus 163 --~~~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~ 240 (543)
...-..+|++||....+.. ....|+.+|+..|.+++..+
T Consensus 138 ~~~~~~~~iv~~ss~~~~~~~---------------------------------------~~~~Y~~sK~a~~~l~~~la 178 (253)
T PRK08217 138 IESGSKGVIINISSIARAGNM---------------------------------------GQTNYSASKAGVAAMTVTWA 178 (253)
T ss_pred HhcCCCeEEEEEccccccCCC---------------------------------------CCchhHHHHHHHHHHHHHHH
Confidence 1122468999887433211 01689999999999988765
Q ss_pred h----cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcc
Q psy7538 241 E----LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLN 316 (543)
Q Consensus 241 ~----~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~ 316 (543)
. .+++++.++|+.|.++..... .+ ........+. ....+.+++|+|+++..++.....
T Consensus 179 ~~~~~~~i~v~~v~pg~v~t~~~~~~--------~~-~~~~~~~~~~---------~~~~~~~~~~~a~~~~~l~~~~~~ 240 (253)
T PRK08217 179 KELARYGIRVAAIAPGVIETEMTAAM--------KP-EALERLEKMI---------PVGRLGEPEEIAHTVRFIIENDYV 240 (253)
T ss_pred HHHHHcCcEEEEEeeCCCcCcccccc--------CH-HHHHHHHhcC---------CcCCCcCHHHHHHHHHHHHcCCCc
Confidence 4 589999999999876643211 11 1222222211 123466889999999988854332
Q ss_pred cCCCCCCcEEEeecC
Q psy7538 317 SKESERKSVCNLTSN 331 (543)
Q Consensus 317 ~~~~~~~~vyni~s~ 331 (543)
.+.+|+++++
T Consensus 241 -----~g~~~~~~gg 250 (253)
T PRK08217 241 -----TGRVLEIDGG 250 (253)
T ss_pred -----CCcEEEeCCC
Confidence 5889998876
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.61 E-value=1e-13 Score=136.82 Aligned_cols=228 Identities=12% Similarity=0.093 Sum_probs=141.9
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+|+++||||+|+||+++++.|++.|+ +|+++.|+... .+++... + .....++.++.+|+++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~---~v~~~~r~~~~---~~~~~~~--------~-----~~~~~~~~~~~~Dl~~ 62 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF---KVAIVDYNEET---AQAAADK--------L-----SKDGGKAIAVKADVSD 62 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHH--------H-----HhcCCeEEEEECCCCC
Confidence 68999999999999999999999986 78888886421 1222111 1 1112467889999999
Q ss_pred CCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc----cCCceEEE
Q psy7538 110 LKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM----KNLKCFTY 171 (543)
Q Consensus 110 ~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~l~~~V~ 171 (543)
++ ++..+++ ++|+|||+|+.... .+.++..+++|+.|+..+++.+... +.-.++|+
T Consensus 63 ~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~ 136 (256)
T PRK08643 63 RD------QVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIIN 136 (256)
T ss_pred HH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 86 4544443 58999999986432 1345668999999998877777542 22358999
Q ss_pred EecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEE
Q psy7538 172 ISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCM 247 (543)
Q Consensus 172 vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~ 247 (543)
+||..+.... |. ...|+.+|+..|.+.+..+. .|+.+.
T Consensus 137 ~sS~~~~~~~----------~~----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~ 178 (256)
T PRK08643 137 ATSQAGVVGN----------PE----------------------------LAVYSSTKFAVRGLTQTAARDLASEGITVN 178 (256)
T ss_pred ECccccccCC----------CC----------------------------CchhHHHHHHHHHHHHHHHHHhcccCcEEE
Confidence 9987432111 00 16899999998888876654 589999
Q ss_pred EEecCeeeecCCCCCCC-CCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 248 ILRPSIVVPIYKEPLPG-WTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 248 IlRps~V~G~~~~p~~g-w~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
.++|+.|.++....... ..++...+........... ....-+...+|+++++..++..... ...+.++
T Consensus 179 ~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~va~~~~~L~~~~~~---~~~G~~i 247 (256)
T PRK08643 179 AYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKD--------ITLGRLSEPEDVANCVSFLAGPDSD---YITGQTI 247 (256)
T ss_pred EEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhcc--------CCCCCCcCHHHHHHHHHHHhCcccc---CccCcEE
Confidence 99999886653210000 0000000000000000000 0112345789999998887755432 1346677
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
.+.++
T Consensus 248 ~vdgg 252 (256)
T PRK08643 248 IVDGG 252 (256)
T ss_pred EeCCC
Confidence 76554
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=8.3e-14 Score=137.54 Aligned_cols=222 Identities=11% Similarity=0.080 Sum_probs=147.8
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+|+||||+|+||+.++++|++.|. +|+++.|+.. .++++ .+.++ ....++.++.+|+
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~G~---~v~~~~r~~~------~~~~~-----~~~~~-----~~~~~~~~~~~Dl 69 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGAGA---HVLVNGRNAA------TLEAA-----VAALR-----AAGGAAEALAFDI 69 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCC---eEEEEeCCHH------HHHHH-----HHHHH-----hcCCceEEEEccC
Confidence 5789999999999999999999999986 7889988642 12111 11111 1123588999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHh-c--cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQ-M--KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--~~l~~~V 170 (543)
++++ ++..+++ .+|+|||+|+.... .+.++..+++|+.|+.++.+.+.+ + .+..++|
T Consensus 70 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv 143 (256)
T PRK06124 70 ADEE------AVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRII 143 (256)
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 9875 5555443 46999999996532 134556799999999999977754 1 2567999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... ....|+.+|+..+.+++..+. .++.+
T Consensus 144 ~~ss~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v 185 (256)
T PRK06124 144 AITSIAGQVARA--------------------------------------GDAVYPAAKQGLTGLMRALAAEFGPHGITS 185 (256)
T ss_pred EEeechhccCCC--------------------------------------CccHhHHHHHHHHHHHHHHHHHHHHhCcEE
Confidence 999985532211 016899999999988876554 48999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
..++|+.|.++...+ + ..+..+........ ....+++++|++.+++.++..... ...|...
T Consensus 186 ~~i~pg~v~t~~~~~---~----~~~~~~~~~~~~~~---------~~~~~~~~~~~a~~~~~l~~~~~~---~~~G~~i 246 (256)
T PRK06124 186 NAIAPGYFATETNAA---M----AADPAVGPWLAQRT---------PLGRWGRPEEIAGAAVFLASPAAS---YVNGHVL 246 (256)
T ss_pred EEEEECCccCcchhh---h----ccChHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHcCcccC---CcCCCEE
Confidence 999999887764321 0 00111111121111 112478899999999998866432 1235555
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
.+.++
T Consensus 247 ~~dgg 251 (256)
T PRK06124 247 AVDGG 251 (256)
T ss_pred EECCC
Confidence 55443
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.9e-14 Score=138.77 Aligned_cols=195 Identities=15% Similarity=0.148 Sum_probs=135.1
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+|+|+||||||+||.++++.|+++|+ +|+++.|...+ .+++ .+.++. ....++.++.+|+++
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~---~Vi~~~r~~~~------~~~~-----~~~~~~----~~~~~~~~~~~Dl~~ 62 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGA---RLYLAARDVER------LERL-----ADDLRA----RGAVAVSTHELDILD 62 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCC---EEEEEeCCHHH------HHHH-----HHHHHH----hcCCeEEEEecCCCC
Confidence 47899999999999999999999986 78999987532 1111 111111 112478899999998
Q ss_pred CCCCCCHHHHHHHhc----CccEEEEcCccCCC----c---ccHHHHHHHHHHHHHHHHHHHHhc---cCCceEEEEecC
Q psy7538 110 LKLGISEIDKKELID----NVDIVYHVAATIRF----D---EPIKTAVILNTRGTRDMLELSKQM---KNLKCFTYISTA 175 (543)
Q Consensus 110 ~~lgls~~~~~~l~~----~vd~ViH~AA~v~~----~---~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~vST~ 175 (543)
++ +++.+++ .+|+|||+|+.... + +.....+++|+.|+.++++++... .+..++|++||.
T Consensus 63 ~~------~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~ 136 (243)
T PRK07102 63 TA------SHAAFLDSLPALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSV 136 (243)
T ss_pred hH------HHHHHHHHHhhcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecc
Confidence 75 5655544 46999999986532 1 223457899999999999887642 246789999998
Q ss_pred ccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEEEec
Q psy7538 176 YCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMILRP 251 (543)
Q Consensus 176 y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~IlRp 251 (543)
++.... |. ...|+.+|+..+.+.+..+. .|+++.+++|
T Consensus 137 ~~~~~~----------~~----------------------------~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~p 178 (243)
T PRK07102 137 AGDRGR----------AS----------------------------NYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKP 178 (243)
T ss_pred cccCCC----------CC----------------------------CcccHHHHHHHHHHHHHHHHHhhccCcEEEEEec
Confidence 543211 00 05799999999988877643 5899999999
Q ss_pred CeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhh
Q psy7538 252 SIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDF 314 (543)
Q Consensus 252 s~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~ 314 (543)
+.|.++.... .. . ...-.+.+++++++++.++...
T Consensus 179 g~v~t~~~~~---------------------~~--~-----~~~~~~~~~~~a~~i~~~~~~~ 213 (243)
T PRK07102 179 GFVRTPMTAG---------------------LK--L-----PGPLTAQPEEVAKDIFRAIEKG 213 (243)
T ss_pred CcccChhhhc---------------------cC--C-----CccccCCHHHHHHHHHHHHhCC
Confidence 9886652210 00 0 0112467899999998777643
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.1e-14 Score=145.82 Aligned_cols=180 Identities=12% Similarity=0.082 Sum_probs=117.7
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+|+||||||+||++++++|++.|+ +|+++.|.... .++. .+.+.... ...++.++.+|+
T Consensus 14 ~~~k~vlItGas~gIG~~~a~~l~~~G~---~vi~~~r~~~~------~~~~-----~~~l~~~~---~~~~~~~~~~Dl 76 (306)
T PRK06197 14 QSGRVAVVTGANTGLGYETAAALAAKGA---HVVLAVRNLDK------GKAA-----AARITAAT---PGADVTLQELDL 76 (306)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCC---EEEEEeCCHHH------HHHH-----HHHHHHhC---CCCceEEEECCC
Confidence 4789999999999999999999999986 78888886421 1111 11111111 124678899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-----cccHHHHHHHHHHH----HHHHHHHHHhccCCceEEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-----DEPIKTAVILNTRG----TRDMLELSKQMKNLKCFTY 171 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-----~~~~~~~~~~Nv~g----t~~ll~~a~~~~~l~~~V~ 171 (543)
++.+ +++.+++ ++|+|||+||.... .+.++..+++|+.| +..+++.+++. +..++|+
T Consensus 77 ~d~~------~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~~~~iV~ 149 (306)
T PRK06197 77 TSLA------SVRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPV-PGSRVVT 149 (306)
T ss_pred CCHH------HHHHHHHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhC-CCCEEEE
Confidence 9875 5555443 58999999996432 23456678999999 66667776665 4579999
Q ss_pred EecCccccC-CCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 172 ISTAYCHPS-EKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 172 vST~y~~~~-~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
+||..+... ....++.....+.. ....|+.||+..+.+....+. .++++
T Consensus 150 vSS~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v 203 (306)
T PRK06197 150 VSSGGHRIRAAIHFDDLQWERRYN--------------------------RVAAYGQSKLANLLFTYELQRRLAAAGATT 203 (306)
T ss_pred ECCHHHhccCCCCccccCcccCCC--------------------------cHHHHHHHHHHHHHHHHHHHHHhhcCCCCe
Confidence 999843321 11111110000110 116899999999998877654 35555
Q ss_pred EEE--ecCeeeec
Q psy7538 247 MIL--RPSIVVPI 257 (543)
Q Consensus 247 ~Il--Rps~V~G~ 257 (543)
.++ .||.|..+
T Consensus 204 ~~v~~~PG~v~T~ 216 (306)
T PRK06197 204 IAVAAHPGVSNTE 216 (306)
T ss_pred EEEEeCCCcccCc
Confidence 544 68877544
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.6e-13 Score=135.08 Aligned_cols=222 Identities=15% Similarity=0.172 Sum_probs=144.8
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||+|+||++++++|++.|+ +|+++.|..+. .+.+. +.+. ....++..+.+|+
T Consensus 6 l~~k~vlItGas~gIG~~l~~~l~~~G~---~Vi~~~r~~~~---~~~~~--------~~~~-----~~~~~~~~~~~D~ 66 (252)
T PRK07035 6 LTGKIALVTGASRGIGEAIAKLLAQQGA---HVIVSSRKLDG---CQAVA--------DAIV-----AAGGKAEALACHI 66 (252)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH--------HHHH-----hcCCeEEEEEcCC
Confidence 5679999999999999999999999986 78889886421 11121 1111 1123577889999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC--------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF--------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~ 169 (543)
++.+ +++.+++ .+|+|||+|+.... .+.++..+++|+.|+..+++++... .+..++
T Consensus 67 ~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~i 140 (252)
T PRK07035 67 GEME------QIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSI 140 (252)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEE
Confidence 9875 4444433 58999999985421 1334568999999998888776332 245799
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||.++..... + -..|+.||+..|.+++.++. +|++
T Consensus 141 v~~sS~~~~~~~~---------~-----------------------------~~~Y~~sK~al~~~~~~l~~e~~~~gi~ 182 (252)
T PRK07035 141 VNVASVNGVSPGD---------F-----------------------------QGIYSITKAAVISMTKAFAKECAPFGIR 182 (252)
T ss_pred EEECchhhcCCCC---------C-----------------------------CcchHHHHHHHHHHHHHHHHHHhhcCEE
Confidence 9999975532211 0 16899999999999988765 5899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
+..+.|+.|-.+..+. ............... ....+...+|+|+++...+..... . ..+.+
T Consensus 183 v~~i~PG~v~t~~~~~-------~~~~~~~~~~~~~~~---------~~~~~~~~~~va~~~~~l~~~~~~-~--~~g~~ 243 (252)
T PRK07035 183 VNALLPGLTDTKFASA-------LFKNDAILKQALAHI---------PLRRHAEPSEMAGAVLYLASDASS-Y--TTGEC 243 (252)
T ss_pred EEEEeeccccCccccc-------ccCCHHHHHHHHccC---------CCCCcCCHHHHHHHHHHHhCcccc-C--ccCCE
Confidence 9999999885443221 111111222221111 112345678999999887765432 1 24667
Q ss_pred EEeecC
Q psy7538 326 CNLTSN 331 (543)
Q Consensus 326 yni~s~ 331 (543)
+++.++
T Consensus 244 ~~~dgg 249 (252)
T PRK07035 244 LNVDGG 249 (252)
T ss_pred EEeCCC
Confidence 777554
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.6e-14 Score=146.32 Aligned_cols=200 Identities=15% Similarity=0.118 Sum_probs=121.2
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
.+|+|+||||||+||.++++.|++.|+ +|+++.|+.. +.+++.+ .+ .....++.++.+|++
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~---~V~~~~r~~~------~~~~~~~-----~l-----~~~~~~~~~~~~Dl~ 65 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW---HVIMACRNLK------KAEAAAQ-----EL-----GIPPDSYTIIHIDLG 65 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC---EEEEEECCHH------HHHHHHH-----Hh-----hccCCceEEEEecCC
Confidence 678999999999999999999999986 7888888642 2222111 11 111246888999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCccCCC--------cccHHHHHHHHHHHHHHHHHHHHhc----c-CCce
Q psy7538 109 QLKLGISEIDKKELID-------NVDIVYHVAATIRF--------DEPIKTAVILNTRGTRDMLELSKQM----K-NLKC 168 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~----~-~l~~ 168 (543)
+++ +++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++++... + +..+
T Consensus 66 ~~~------~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~r 139 (322)
T PRK07453 66 DLD------SVRRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPR 139 (322)
T ss_pred CHH------HHHHHHHHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCce
Confidence 875 5555543 48999999996421 1345668999999999998887642 1 1359
Q ss_pred EEEEecCccccCC--CcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-----
Q psy7538 169 FTYISTAYCHPSE--KVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----- 241 (543)
Q Consensus 169 ~V~vST~y~~~~~--~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----- 241 (543)
+|++||...+... .... .+.+.+.+++.......... ....... .....+.|+.||+..+.+...+++
T Consensus 140 iV~vsS~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~Y~~SK~a~~~~~~~la~~~~~~ 214 (322)
T PRK07453 140 LVILGTVTANPKELGGKIP---IPAPADLGDLSGFEAGFKAP-ISMADGK-KFKPGKAYKDSKLCNMLTMRELHRRYHES 214 (322)
T ss_pred EEEEcccccCccccCCccC---CCCccchhhhhcchhccccc-ccccCcc-CCCccchhhHhHHHHHHHHHHHHHhhccc
Confidence 9999997443211 0000 00010100000000000000 0000000 001126899999988776665544
Q ss_pred cCCcEEEEecCeeeecC
Q psy7538 242 LGMPCMILRPSIVVPIY 258 (543)
Q Consensus 242 ~~lp~~IlRps~V~G~~ 258 (543)
.|+.+..+|||.|+++.
T Consensus 215 ~gi~v~~v~PG~v~~t~ 231 (322)
T PRK07453 215 TGITFSSLYPGCVADTP 231 (322)
T ss_pred CCeEEEEecCCcccCCc
Confidence 37999999999998653
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.5e-13 Score=135.76 Aligned_cols=224 Identities=11% Similarity=0.081 Sum_probs=144.5
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|+||++++++|++.|+ +|.++.|+.... .+.+.+ .++ ....++..+.+|+
T Consensus 6 ~~~k~~lVtG~s~gIG~~ia~~l~~~G~---~v~~~~r~~~~~--~~~~~~--------~l~-----~~~~~~~~~~~D~ 67 (254)
T PRK06114 6 LDGQVAFVTGAGSGIGQRIAIGLAQAGA---DVALFDLRTDDG--LAETAE--------HIE-----AAGRRAIQIAADV 67 (254)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCcchH--HHHHHH--------HHH-----hcCCceEEEEcCC
Confidence 5789999999999999999999999986 788888864211 111111 111 1124677899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+..+++++... .+-.++|
T Consensus 68 ~~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv 141 (254)
T PRK06114 68 TSKA------DLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIV 141 (254)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEE
Confidence 9875 4554443 47999999997542 2445678999999998877765431 2446899
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+....... ....|+.+|+..+.+.+..+. +|+++
T Consensus 142 ~isS~~~~~~~~~~------------------------------------~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v 185 (254)
T PRK06114 142 NIASMSGIIVNRGL------------------------------------LQAHYNASKAGVIHLSKSLAMEWVGRGIRV 185 (254)
T ss_pred EECchhhcCCCCCC------------------------------------CcchHHHHHHHHHHHHHHHHHHHhhcCeEE
Confidence 99998553221100 015799999998888877654 58999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
.+++|+.|.++.... +. ............ + ..-+..++|++++++.++..... -..|++.
T Consensus 186 ~~v~PG~i~t~~~~~-~~-------~~~~~~~~~~~~-------p--~~r~~~~~dva~~~~~l~s~~~~---~~tG~~i 245 (254)
T PRK06114 186 NSISPGYTATPMNTR-PE-------MVHQTKLFEEQT-------P--MQRMAKVDEMVGPAVFLLSDAAS---FCTGVDL 245 (254)
T ss_pred EEEeecCccCccccc-cc-------chHHHHHHHhcC-------C--CCCCcCHHHHHHHHHHHcCcccc---CcCCceE
Confidence 999999886653210 10 001111111111 1 11245679999998887754322 1346677
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
.+.++
T Consensus 246 ~~dgg 250 (254)
T PRK06114 246 LVDGG 250 (254)
T ss_pred EECcC
Confidence 66654
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.3e-13 Score=136.31 Aligned_cols=219 Identities=10% Similarity=0.070 Sum_probs=143.4
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+++|+||||+|+||++++++|++.|+ +|.++.|+... ..+++.+ .++ ....++.++.+|+++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~---~V~~~~~~~~~--~~~~~~~--------~~~-----~~~~~~~~~~~Dl~~ 63 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGF---DIGITWHSDEE--GAKETAE--------EVR-----SHGVRAEIRQLDLSD 63 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCChH--HHHHHHH--------HHH-----hcCCceEEEEccCCC
Confidence 67999999999999999999999987 67777664321 1122211 111 122468899999998
Q ss_pred CCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc----cCCceEEE
Q psy7538 110 LKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM----KNLKCFTY 171 (543)
Q Consensus 110 ~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~l~~~V~ 171 (543)
++ +++.+++ .+|+|||+|+.... .+.++..+++|+.|+.++++++... ++-.++|+
T Consensus 64 ~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~ 137 (256)
T PRK12743 64 LP------EGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIIN 137 (256)
T ss_pred HH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 75 4544443 58999999986532 1345668999999999999988653 11258999
Q ss_pred EecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEE
Q psy7538 172 ISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCM 247 (543)
Q Consensus 172 vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~ 247 (543)
+||..+..... + ...|+.+|+..+.+++..+. +++++.
T Consensus 138 isS~~~~~~~~---------~-----------------------------~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~ 179 (256)
T PRK12743 138 ITSVHEHTPLP---------G-----------------------------ASAYTAAKHALGGLTKAMALELVEHGILVN 179 (256)
T ss_pred EeeccccCCCC---------C-----------------------------cchhHHHHHHHHHHHHHHHHHhhhhCeEEE
Confidence 99974422110 0 15899999999998877654 479999
Q ss_pred EEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEE
Q psy7538 248 ILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCN 327 (543)
Q Consensus 248 IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyn 327 (543)
.++|+.+.++.....+ .........+. ......+.+|+++++..++..... ...+.++.
T Consensus 180 ~v~Pg~~~t~~~~~~~---------~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~~~---~~~G~~~~ 238 (256)
T PRK12743 180 AVAPGAIATPMNGMDD---------SDVKPDSRPGI---------PLGRPGDTHEIASLVAWLCSEGAS---YTTGQSLI 238 (256)
T ss_pred EEEeCCccCccccccC---------hHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHhCcccc---CcCCcEEE
Confidence 9999998776432110 01111111111 011234789999998877754332 12466777
Q ss_pred eecC
Q psy7538 328 LTSN 331 (543)
Q Consensus 328 i~s~ 331 (543)
+.++
T Consensus 239 ~dgg 242 (256)
T PRK12743 239 VDGG 242 (256)
T ss_pred ECCC
Confidence 7655
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.3e-13 Score=136.35 Aligned_cols=221 Identities=13% Similarity=0.052 Sum_probs=141.6
Q ss_pred CCCEEEEEcCcc--hhHHHHHHHHHhhCCCcCEEEEEecCCCCCC------HHHHHHHHhcCchhHHHHhhcCcCCCCce
Q psy7538 29 ENKSIFLSGGSG--FLGKVLIEKILRLEPNVKKIYLLMRTKKGKT------PNQRVEELFESPVFDALKTLRGKSILQKI 100 (543)
Q Consensus 29 ~~~~VlITGatG--FiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~------~~~rl~~~~~~~~f~~l~~~~~~~~~~~v 100 (543)
++++|+|||||| .||.+++++|++.|+ +|+++.|+..+.. ..+... +.+.+ .....++
T Consensus 4 ~~k~vlItGas~~~giG~~la~~l~~~G~---~vi~~~r~~~~~~~~~~~~~~~~~~------~~~~~-----~~~~~~~ 69 (256)
T PRK12748 4 MKKIALVTGASRLNGIGAAVCRRLAAKGI---DIFFTYWSPYDKTMPWGMHDKEPVL------LKEEI-----ESYGVRC 69 (256)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHcCC---cEEEEcCCccccccccccchhhHHH------HHHHH-----HhcCCeE
Confidence 678999999996 599999999999986 7888888732110 011100 00111 1122468
Q ss_pred EEEEccCCCCCCCCCHHHHHHHh-------cCccEEEEcCccCCCc-------ccHHHHHHHHHHHHHHHHHHHHhc---
Q psy7538 101 QVISGDITQLKLGISEIDKKELI-------DNVDIVYHVAATIRFD-------EPIKTAVILNTRGTRDMLELSKQM--- 163 (543)
Q Consensus 101 ~~i~gDl~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~--- 163 (543)
.++.+|+++++ ++..++ ..+|+|||+|+..... +.++..+++|+.|+..+++++...
T Consensus 70 ~~~~~D~~~~~------~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 143 (256)
T PRK12748 70 EHMEIDLSQPY------APNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDG 143 (256)
T ss_pred EEEECCCCCHH------HHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhh
Confidence 89999999875 444433 3589999999865321 234567999999999999988542
Q ss_pred cCCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh--
Q psy7538 164 KNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-- 241 (543)
Q Consensus 164 ~~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-- 241 (543)
.+-.++|++||..+..+.. . ...|+.+|+..|.+++..+.
T Consensus 144 ~~~~~iv~~ss~~~~~~~~---------~-----------------------------~~~Y~~sK~a~~~~~~~la~e~ 185 (256)
T PRK12748 144 KAGGRIINLTSGQSLGPMP---------D-----------------------------ELAYAATKGAIEAFTKSLAPEL 185 (256)
T ss_pred cCCeEEEEECCccccCCCC---------C-----------------------------chHHHHHHHHHHHHHHHHHHHH
Confidence 1346899999975533210 0 06899999999999877654
Q ss_pred --cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCC
Q psy7538 242 --LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKE 319 (543)
Q Consensus 242 --~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~ 319 (543)
.+++++.++|+.+..+... . ........ . .....+...+|+++++..++.....
T Consensus 186 ~~~~i~v~~i~Pg~~~t~~~~-----------~-~~~~~~~~-~--------~~~~~~~~~~~~a~~~~~l~~~~~~--- 241 (256)
T PRK12748 186 AEKGITVNAVNPGPTDTGWIT-----------E-ELKHHLVP-K--------FPQGRVGEPVDAARLIAFLVSEEAK--- 241 (256)
T ss_pred HHhCeEEEEEEeCcccCCCCC-----------h-hHHHhhhc-c--------CCCCCCcCHHHHHHHHHHHhCcccc---
Confidence 4899999999866433110 0 11111110 0 0112245579999998876654322
Q ss_pred CCCCcEEEeecC
Q psy7538 320 SERKSVCNLTSN 331 (543)
Q Consensus 320 ~~~~~vyni~s~ 331 (543)
...+.++++.++
T Consensus 242 ~~~g~~~~~d~g 253 (256)
T PRK12748 242 WITGQVIHSEGG 253 (256)
T ss_pred cccCCEEEecCC
Confidence 124778888665
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=9.9e-14 Score=140.06 Aligned_cols=197 Identities=16% Similarity=0.159 Sum_probs=135.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++++|+||||+|+||++++++|++.|+ +|+++.|+. ++++++. +.+. ....++.++.+|+
T Consensus 38 ~~~k~vlItGasggIG~~la~~La~~G~---~Vi~~~R~~------~~l~~~~-----~~l~-----~~~~~~~~~~~Dl 98 (293)
T PRK05866 38 LTGKRILLTGASSGIGEAAAEQFARRGA---TVVAVARRE------DLLDAVA-----DRIT-----RAGGDAMAVPCDL 98 (293)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHH-----HHHH-----hcCCcEEEEEccC
Confidence 5679999999999999999999999986 788999874 2222211 1111 1123577899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCCc---------ccHHHHHHHHHHHHHHHHHHHH----hccCCc
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRFD---------EPIKTAVILNTRGTRDMLELSK----QMKNLK 167 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~~---------~~~~~~~~~Nv~gt~~ll~~a~----~~~~l~ 167 (543)
++++ ++..+++ ++|+|||+||..... +.++..+++|+.|+.++++.+. +. +..
T Consensus 99 ~d~~------~v~~~~~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g 171 (293)
T PRK05866 99 SDLD------AVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLER-GDG 171 (293)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCc
Confidence 9875 5665555 789999999865321 2345678999999888877654 33 557
Q ss_pred eEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cC
Q psy7538 168 CFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LG 243 (543)
Q Consensus 168 ~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~ 243 (543)
++|++||..+..... | ..+.|+.||+..+.+++..+. .+
T Consensus 172 ~iv~isS~~~~~~~~---------p----------------------------~~~~Y~asKaal~~l~~~la~e~~~~g 214 (293)
T PRK05866 172 HIINVATWGVLSEAS---------P----------------------------LFSVYNASKAALSAVSRVIETEWGDRG 214 (293)
T ss_pred EEEEECChhhcCCCC---------C----------------------------CcchHHHHHHHHHHHHHHHHHHhcccC
Confidence 999999974432100 0 016899999999988877644 58
Q ss_pred CcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhh
Q psy7538 244 MPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDF 314 (543)
Q Consensus 244 lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~ 314 (543)
+.+.+++|+.|-.+...+ . .. ......+..+++|+.++.++.+.
T Consensus 215 I~v~~v~pg~v~T~~~~~---------------------~-~~-----~~~~~~~~pe~vA~~~~~~~~~~ 258 (293)
T PRK05866 215 VHSTTLYYPLVATPMIAP---------------------T-KA-----YDGLPALTADEAAEWMVTAARTR 258 (293)
T ss_pred cEEEEEEcCcccCccccc---------------------c-cc-----ccCCCCCCHHHHHHHHHHHHhcC
Confidence 999999999764432110 0 00 00112467899999998888653
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=9.1e-14 Score=142.89 Aligned_cols=202 Identities=13% Similarity=0.158 Sum_probs=135.5
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++++|+||||||+||++++++|++.|+ +|+++.|+. ++++++. +.++ ....++.++.+|+
T Consensus 6 l~~k~vlITGas~gIG~~la~~la~~G~---~Vvl~~R~~------~~l~~~~-----~~l~-----~~g~~~~~v~~Dv 66 (334)
T PRK07109 6 IGRQVVVITGASAGVGRATARAFARRGA---KVVLLARGE------EGLEALA-----AEIR-----AAGGEALAVVADV 66 (334)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHH-----HHHH-----HcCCcEEEEEecC
Confidence 5689999999999999999999999986 788888864 2232211 1111 1124678899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHH----HhccCCceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELS----KQMKNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~l~~~ 169 (543)
++++ +++.+++ .+|++||+|+...+ .+.++..+++|+.|+.++.+.+ ++. +..++
T Consensus 67 ~d~~------~v~~~~~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~-~~g~i 139 (334)
T PRK07109 67 ADAE------AVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPR-DRGAI 139 (334)
T ss_pred CCHH------HHHHHHHHHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEE
Confidence 9876 5555543 58999999996432 1345567889888776655554 433 45789
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh------cC
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME------LG 243 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~------~~ 243 (543)
|++||..+..... . ...|+.+|+..+.+.+.... .+
T Consensus 140 V~isS~~~~~~~~----------~----------------------------~~~Y~asK~a~~~~~~~l~~el~~~~~~ 181 (334)
T PRK07109 140 IQVGSALAYRSIP----------L----------------------------QSAYCAAKHAIRGFTDSLRCELLHDGSP 181 (334)
T ss_pred EEeCChhhccCCC----------c----------------------------chHHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 9999986653211 0 16899999988887765432 26
Q ss_pred CcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhh
Q psy7538 244 MPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDF 314 (543)
Q Consensus 244 lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~ 314 (543)
+.+++++|+.|-.+.. .|.. ... + ........++..+|+|++++.++.++
T Consensus 182 I~v~~v~Pg~v~T~~~----~~~~----------~~~-~------~~~~~~~~~~~pe~vA~~i~~~~~~~ 231 (334)
T PRK07109 182 VSVTMVQPPAVNTPQF----DWAR----------SRL-P------VEPQPVPPIYQPEVVADAILYAAEHP 231 (334)
T ss_pred eEEEEEeCCCccCchh----hhhh----------hhc-c------ccccCCCCCCCHHHHHHHHHHHHhCC
Confidence 8999999998754311 1100 000 0 01112235678999999999988764
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.4e-13 Score=135.96 Aligned_cols=196 Identities=14% Similarity=0.129 Sum_probs=130.6
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhC-CCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLE-PNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g-~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++++|+||||||+||++++++|++.| . +|+++.|+.... .++-.+++ + .....+++++.+|+
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~---~V~~~~r~~~~~-~~~~~~~l---------~----~~~~~~v~~~~~D~ 69 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPA---RVVLAALPDDPR-RDAAVAQM---------K----AAGASSVEVIDFDA 69 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCC---eEEEEeCCcchh-HHHHHHHH---------H----hcCCCceEEEEecC
Confidence 57899999999999999999999985 4 788888875420 11111121 1 11123688999999
Q ss_pred CCCCCCCCHHHHHH----Hh--cCccEEEEcCccCCCc----cc---HHHHHHHHHHHHHH----HHHHHHhccCCceEE
Q psy7538 108 TQLKLGISEIDKKE----LI--DNVDIVYHVAATIRFD----EP---IKTAVILNTRGTRD----MLELSKQMKNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~----l~--~~vd~ViH~AA~v~~~----~~---~~~~~~~Nv~gt~~----ll~~a~~~~~l~~~V 170 (543)
++++ +++. +. .++|++||+||..... .. ..+.+++|+.|+.. +++++++. +..++|
T Consensus 70 ~~~~------~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~-~~~~iv 142 (253)
T PRK07904 70 LDTD------SHPKVIDAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQ-GFGQII 142 (253)
T ss_pred CChH------HHHHHHHHHHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhc-CCceEE
Confidence 9875 3333 32 2699999999875321 11 12468999998876 55666655 568999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+.... + ....|+.||+..+.+.+.... +++++
T Consensus 143 ~isS~~g~~~~----------~----------------------------~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v 184 (253)
T PRK07904 143 AMSSVAGERVR----------R----------------------------SNFVYGSTKAGLDGFYLGLGEALREYGVRV 184 (253)
T ss_pred EEechhhcCCC----------C----------------------------CCcchHHHHHHHHHHHHHHHHHHhhcCCEE
Confidence 99998552211 0 015799999988876655432 68999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhc
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFL 315 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~ 315 (543)
++++|+.|..+... .. . .....+..+|+|+.++.++.+..
T Consensus 185 ~~v~Pg~v~t~~~~---------------------~~-~-------~~~~~~~~~~~A~~i~~~~~~~~ 224 (253)
T PRK07904 185 LVVRPGQVRTRMSA---------------------HA-K-------EAPLTVDKEDVAKLAVTAVAKGK 224 (253)
T ss_pred EEEeeCceecchhc---------------------cC-C-------CCCCCCCHHHHHHHHHHHHHcCC
Confidence 99999988553210 00 0 00124688999999998886543
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=4e-14 Score=139.64 Aligned_cols=221 Identities=13% Similarity=0.096 Sum_probs=145.6
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||+|+||.+++++|++.|+ +|.+..|+.. +++++ .+.++ ....++..+.+|+
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~---~V~~~~r~~~------~~~~~-----~~~l~-----~~~~~~~~~~~D~ 67 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYVEAGA---QVAIAARHLD------ALEKL-----ADEIG-----TSGGKVVPVCCDV 67 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEcCCHH------HHHHH-----HHHHH-----hcCCeEEEEEccC
Confidence 5789999999999999999999999987 7888888642 22221 11121 1124678899999
Q ss_pred CCCCCCCCHHHHHHHh-------cCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cC-CceE
Q psy7538 108 TQLKLGISEIDKKELI-------DNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KN-LKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~-l~~~ 169 (543)
++++ +++.++ ..+|++||+|+.... .+.++..+++|+.|+..+++++... ++ -.++
T Consensus 68 ~~~~------~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~i 141 (253)
T PRK05867 68 SQHQ------QVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVI 141 (253)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEE
Confidence 9875 455444 368999999997542 1345667899999999999887542 11 2478
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+..... |. ....|+.+|+..+.+.+..+. +|+.
T Consensus 142 v~~sS~~~~~~~~---------~~---------------------------~~~~Y~asKaal~~~~~~la~e~~~~gI~ 185 (253)
T PRK05867 142 INTASMSGHIINV---------PQ---------------------------QVSHYCASKAAVIHLTKAMAVELAPHKIR 185 (253)
T ss_pred EEECcHHhcCCCC---------CC---------------------------CccchHHHHHHHHHHHHHHHHHHhHhCeE
Confidence 9998875432100 00 015799999999999987754 5899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
+..++|+.|-.+..++.+ .......... ...-+...+|+|++++.++..... ...|++
T Consensus 186 vn~i~PG~v~t~~~~~~~----------~~~~~~~~~~---------~~~r~~~p~~va~~~~~L~s~~~~---~~tG~~ 243 (253)
T PRK05867 186 VNSVSPGYILTELVEPYT----------EYQPLWEPKI---------PLGRLGRPEELAGLYLYLASEASS---YMTGSD 243 (253)
T ss_pred EEEeecCCCCCcccccch----------HHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCcccC---CcCCCe
Confidence 999999988554322110 1111111111 112356789999999888754322 124667
Q ss_pred EEeecC
Q psy7538 326 CNLTSN 331 (543)
Q Consensus 326 yni~s~ 331 (543)
..+.++
T Consensus 244 i~vdgG 249 (253)
T PRK05867 244 IVIDGG 249 (253)
T ss_pred EEECCC
Confidence 776655
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1e-13 Score=137.16 Aligned_cols=227 Identities=14% Similarity=0.172 Sum_probs=149.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||+|+||+.++++|++.|.. .|+++.|.... .+... +.++ ....++.++.+|+
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~--~V~~~~r~~~~---~~~~~--------~~l~-----~~~~~~~~~~~D~ 65 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAA--GLVICGRNAEK---GEAQA--------AELE-----ALGAKAVFVQADL 65 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCC--eEEEEcCCHHH---HHHHH--------HHHH-----hcCCeEEEEEccC
Confidence 67899999999999999999999999862 38888886421 11111 1111 1124677889999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc----cCCceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM----KNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~l~~~ 169 (543)
++++ ++.++++ ++|+|||+|+.... .+.++..+++|+.|+.++++.+.+. +...++
T Consensus 66 ~~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~i 139 (260)
T PRK06198 66 SDVE------DCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTI 139 (260)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEE
Confidence 9875 5555443 58999999996531 2334567899999999999888542 113579
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+..... ..+.|+.+|...|.+.+..+. .++.
T Consensus 140 v~~ss~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~ 181 (260)
T PRK06198 140 VNIGSMSAHGGQP--------------------------------------FLAAYCASKGALATLTRNAAYALLRNRIR 181 (260)
T ss_pred EEECCcccccCCC--------------------------------------CcchhHHHHHHHHHHHHHHHHHhcccCeE
Confidence 9999986543211 016899999999999887654 4789
Q ss_pred EEEEecCeeeecCCCCCCCCCCCC-CchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCc
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNI-NGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKS 324 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~-~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~ 324 (543)
++.++|+.+.++....... .+ .....++..... ......+++++|+++++..++..... ...++
T Consensus 182 v~~i~pg~~~t~~~~~~~~---~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~a~~~~~l~~~~~~---~~~G~ 246 (260)
T PRK06198 182 VNGLNIGWMATEGEDRIQR---EFHGAPDDWLEKAAA---------TQPFGRLLDPDEVARAVAFLLSDESG---LMTGS 246 (260)
T ss_pred EEEEeeccccCcchhhhhh---hccCCChHHHHHHhc---------cCCccCCcCHHHHHHHHHHHcChhhC---CccCc
Confidence 9999999887764211000 00 011112222111 11123467999999999988754432 13577
Q ss_pred EEEeecC
Q psy7538 325 VCNLTSN 331 (543)
Q Consensus 325 vyni~s~ 331 (543)
++++.++
T Consensus 247 ~~~~~~~ 253 (260)
T PRK06198 247 VIDFDQS 253 (260)
T ss_pred eEeECCc
Confidence 8888766
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.3e-13 Score=134.64 Aligned_cols=217 Identities=11% Similarity=0.149 Sum_probs=139.8
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+++||||||+||++++++|++.|+ +|+++.|+. .++.+++.+ .+ .....++.++.+|++++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~---~v~~~~r~~-----~~~~~~~~~-----~~-----~~~~~~~~~~~~D~~~~ 62 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGY---RVAANCGPN-----EERAEAWLQ-----EQ-----GALGFDFRVVEGDVSSF 62 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCC-----HHHHHHHHH-----HH-----HhhCCceEEEEecCCCH
Confidence 6899999999999999999999987 788888842 122222111 01 11124688999999987
Q ss_pred CCCCCHHHHHHHh-------cCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHH----HhccCCceEEEE
Q psy7538 111 KLGISEIDKKELI-------DNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELS----KQMKNLKCFTYI 172 (543)
Q Consensus 111 ~lgls~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~l~~~V~v 172 (543)
+ ++..++ ..+|+|||+|+.... .+.++..+++|+.++..+++.+ ++. +.+++|++
T Consensus 63 ~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~i 135 (242)
T TIGR01829 63 E------SCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRER-GWGRIINI 135 (242)
T ss_pred H------HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEE
Confidence 5 454443 358999999986532 1345567899999988765554 443 56799999
Q ss_pred ecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEE
Q psy7538 173 STAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMI 248 (543)
Q Consensus 173 ST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~I 248 (543)
||.++..... ....|+.+|...+.+++..+. .++++..
T Consensus 136 ss~~~~~~~~--------------------------------------~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~ 177 (242)
T TIGR01829 136 SSVNGQKGQF--------------------------------------GQTNYSAAKAGMIGFTKALAQEGATKGVTVNT 177 (242)
T ss_pred cchhhcCCCC--------------------------------------CcchhHHHHHHHHHHHHHHHHHhhhhCeEEEE
Confidence 9975432110 015799999988877766543 5899999
Q ss_pred EecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEe
Q psy7538 249 LRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNL 328 (543)
Q Consensus 249 lRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni 328 (543)
++|+.+.++...+.+ + ..+.....+. ....+...+++++++..++..... ...|+.+.+
T Consensus 178 i~pg~~~t~~~~~~~--------~-~~~~~~~~~~---------~~~~~~~~~~~a~~~~~l~~~~~~---~~~G~~~~~ 236 (242)
T TIGR01829 178 ISPGYIATDMVMAMR--------E-DVLNSIVAQI---------PVGRLGRPEEIAAAVAFLASEEAG---YITGATLSI 236 (242)
T ss_pred EeeCCCcCccccccc--------h-HHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCchhc---CccCCEEEe
Confidence 999988765432211 1 1222222111 112345668899988766644321 124778877
Q ss_pred ecC
Q psy7538 329 TSN 331 (543)
Q Consensus 329 ~s~ 331 (543)
.++
T Consensus 237 ~gg 239 (242)
T TIGR01829 237 NGG 239 (242)
T ss_pred cCC
Confidence 765
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.2e-13 Score=135.76 Aligned_cols=196 Identities=15% Similarity=0.077 Sum_probs=134.4
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+|+++||||||+||++++++|++.|. +|.++.|+.. +++++ .+.+... ....++.++.+|+++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~---~v~~~~r~~~------~~~~~-----~~~~~~~---~~~~~~~~~~~D~~~ 64 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR---DLALCARRTD------RLEEL-----KAELLAR---YPGIKVAVAALDVND 64 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC---EEEEEeCCHH------HHHHH-----HHHHHhh---CCCceEEEEEcCCCC
Confidence 68999999999999999999999985 7888888642 22221 1111111 112468899999998
Q ss_pred CCCCCCHHHHHHHh-------cCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEEEE
Q psy7538 110 LKLGISEIDKKELI-------DNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFTYI 172 (543)
Q Consensus 110 ~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~v 172 (543)
++ ++..++ .++|+|||+||.... .+.....+++|+.|+.++++.+... .+..++|++
T Consensus 65 ~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ 138 (248)
T PRK08251 65 HD------QVFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLI 138 (248)
T ss_pred HH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 75 454443 368999999986532 1334567899999999988887431 256789999
Q ss_pred ecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEE
Q psy7538 173 STAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMI 248 (543)
Q Consensus 173 ST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~I 248 (543)
||..+.... +.+ .+.|+.||+..+.+...... .++++++
T Consensus 139 sS~~~~~~~--------~~~-----------------------------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~ 181 (248)
T PRK08251 139 SSVSAVRGL--------PGV-----------------------------KAAYAASKAGVASLGEGLRAELAKTPIKVST 181 (248)
T ss_pred eccccccCC--------CCC-----------------------------cccHHHHHHHHHHHHHHHHHHhcccCcEEEE
Confidence 997442211 000 16799999999988876654 4789999
Q ss_pred EecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhh
Q psy7538 249 LRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDF 314 (543)
Q Consensus 249 lRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~ 314 (543)
++|+.|.++... .. + . ....++.+++|++++.++...
T Consensus 182 v~pg~v~t~~~~-----------------~~--~---------~-~~~~~~~~~~a~~i~~~~~~~ 218 (248)
T PRK08251 182 IEPGYIRSEMNA-----------------KA--K---------S-TPFMVDTETGVKALVKAIEKE 218 (248)
T ss_pred EecCcCcchhhh-----------------cc--c---------c-CCccCCHHHHHHHHHHHHhcC
Confidence 999977544211 00 0 0 123578899999999888653
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.8e-13 Score=136.62 Aligned_cols=226 Identities=13% Similarity=0.115 Sum_probs=143.8
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||+|+||++++++|++.|+ +|+++.|+. . .++..+++ + ....++.++.+|+
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~G~---~vi~~~r~~-~--~~~~~~~~---------~-----~~~~~~~~~~~Dl 63 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQEGA---YVLAVDIAE-A--VSETVDKI---------K-----SNGGKAKAYHVDI 63 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCcH-H--HHHHHHHH---------H-----hcCCeEEEEEeec
Confidence 4689999999999999999999999986 788888862 1 11111121 1 1124688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC--------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF--------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~ 169 (543)
++++ ++..+++ .+|++||+|+.... .+.++..+++|+.|+..+++.+... ++ .++
T Consensus 64 ~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~i 136 (272)
T PRK08589 64 SDEQ------QVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSI 136 (272)
T ss_pred CCHH------HHHHHHHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEE
Confidence 9875 4544443 48999999986531 1235567889999988777765432 13 689
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+..... ....|+.||+..+.+++..+. .|+.
T Consensus 137 v~isS~~~~~~~~--------------------------------------~~~~Y~asKaal~~l~~~la~e~~~~gI~ 178 (272)
T PRK08589 137 INTSSFSGQAADL--------------------------------------YRSGYNAAKGAVINFTKSIAIEYGRDGIR 178 (272)
T ss_pred EEeCchhhcCCCC--------------------------------------CCchHHHHHHHHHHHHHHHHHHhhhcCeE
Confidence 9999975432210 116899999999999887654 5799
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
+..+.|+.|..+..+...+. ........... .... .....-+...+|++++++.++..... ...+.+
T Consensus 179 v~~v~PG~v~T~~~~~~~~~-----~~~~~~~~~~~-~~~~----~~~~~~~~~~~~va~~~~~l~s~~~~---~~~G~~ 245 (272)
T PRK08589 179 ANAIAPGTIETPLVDKLTGT-----SEDEAGKTFRE-NQKW----MTPLGRLGKPEEVAKLVVFLASDDSS---FITGET 245 (272)
T ss_pred EEEEecCcccCchhhhhccc-----chhhHHHHHhh-hhhc----cCCCCCCcCHHHHHHHHHHHcCchhc---CcCCCE
Confidence 99999998865432211110 00000000000 0000 00111246789999999887764332 124667
Q ss_pred EEeecC
Q psy7538 326 CNLTSN 331 (543)
Q Consensus 326 yni~s~ 331 (543)
+.+.++
T Consensus 246 i~vdgg 251 (272)
T PRK08589 246 IRIDGG 251 (272)
T ss_pred EEECCC
Confidence 777655
|
|
| >KOG2774|consensus | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.6e-14 Score=133.70 Aligned_cols=252 Identities=19% Similarity=0.201 Sum_probs=172.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
-+.-+||||||-|.+|..++.-|... ++-..|.+-+--|.. ....+.-.+|..|+
T Consensus 42 ~~~PrvLITG~LGQLG~~~A~LLR~~-yGs~~VILSDI~KPp------------------------~~V~~~GPyIy~DI 96 (366)
T KOG2774|consen 42 QKAPRVLITGSLGQLGRGLASLLRYM-YGSECVILSDIVKPP------------------------ANVTDVGPYIYLDI 96 (366)
T ss_pred CCCCeEEEecchHHHhHHHHHHHHHH-hCCccEehhhccCCc------------------------hhhcccCCchhhhh
Confidence 34569999999999999987655443 443344433222211 11223334677888
Q ss_pred CCCCCCCCHHHHHHHh--cCccEEEEcCccCCC--cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCc
Q psy7538 108 TQLKLGISEIDKKELI--DNVDIVYHVAATIRF--DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKV 183 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~--~~vd~ViH~AA~v~~--~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~ 183 (543)
.|.. .++++. ..+|..||..|..+. +.+...+.++|+.|..|+++.|++. +++-|| -||+.+.++..+
T Consensus 97 LD~K------~L~eIVVn~RIdWL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~-kL~iFV-PSTIGAFGPtSP 168 (366)
T KOG2774|consen 97 LDQK------SLEEIVVNKRIDWLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKH-KLKVFV-PSTIGAFGPTSP 168 (366)
T ss_pred hccc------cHHHhhcccccceeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHc-CeeEee-cccccccCCCCC
Confidence 8765 455554 358999999886542 3444568899999999999999998 776554 788877776543
Q ss_pred ccccccCCCCChHHHHHHHhhcchhhhhhhhhhcc-CCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCCC
Q psy7538 184 LEERTYLPPDDPHQVILRAESMKEEDLEVFRQDIL-GEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKEP 261 (543)
Q Consensus 184 i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~p 261 (543)
-.. ||.+. ....+.|+.||.-||.+-..+.. .|+..-.+|.+.+++... |
T Consensus 169 RNP---------------------------TPdltIQRPRTIYGVSKVHAEL~GEy~~hrFg~dfr~~rfPg~is~~~-p 220 (366)
T KOG2774|consen 169 RNP---------------------------TPDLTIQRPRTIYGVSKVHAELLGEYFNHRFGVDFRSMRFPGIISATK-P 220 (366)
T ss_pred CCC---------------------------CCCeeeecCceeechhHHHHHHHHHHHHhhcCccceecccCcccccCC-C
Confidence 211 12121 11227999999999987766655 799999999988887643 3
Q ss_pred CCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHH
Q psy7538 262 LPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEI 341 (543)
Q Consensus 262 ~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~ 341 (543)
-.|-+| |...-+-.+..+|+- ..+-.++.+..+++..||-.+++..+..+.. . ...++||++. -..|-.|+
T Consensus 221 gggttd--ya~A~f~~Al~~gk~-tCylrpdtrlpmmy~~dc~~~~~~~~~a~~~-~--lkrr~ynvt~---~sftpee~ 291 (366)
T KOG2774|consen 221 GGGTTD--YAIAIFYDALQKGKH-TCYLRPDTRLPMMYDTDCMASVIQLLAADSQ-S--LKRRTYNVTG---FSFTPEEI 291 (366)
T ss_pred CCCcch--hHHHHHHHHHHcCCc-ccccCCCccCceeehHHHHHHHHHHHhCCHH-H--hhhheeeece---eccCHHHH
Confidence 344333 333334444555554 4567899999999999999999887766543 1 2467999987 46899999
Q ss_pred HHHHhhhh
Q psy7538 342 CDIGKDIV 349 (543)
Q Consensus 342 ~~~i~~~~ 349 (543)
++.+.+..
T Consensus 292 ~~~~~~~~ 299 (366)
T KOG2774|consen 292 ADAIRRVM 299 (366)
T ss_pred HHHHHhhC
Confidence 99988876
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.8e-13 Score=135.08 Aligned_cols=220 Identities=16% Similarity=0.122 Sum_probs=141.4
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|+||+++++.|++.|+ +|.++.|... +..+++ .. .++.++.+|+
T Consensus 5 l~~k~~lItGas~gIG~~~a~~l~~~G~---~v~~~~~~~~-----~~~~~l--------------~~--~~~~~~~~Dl 60 (255)
T PRK06463 5 FKGKVALITGGTRGIGRAIAEAFLREGA---KVAVLYNSAE-----NEAKEL--------------RE--KGVFTIKCDV 60 (255)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCcH-----HHHHHH--------------Hh--CCCeEEEecC
Confidence 4689999999999999999999999987 6766666432 111111 11 1467889999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHH----HHhccCCceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLEL----SKQMKNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~----a~~~~~l~~~ 169 (543)
++++ +++.+++ ++|+|||+|+.... .+.++..+++|+.|+..+.+. .++. +..++
T Consensus 61 ~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-~~g~i 133 (255)
T PRK06463 61 GNRD------QVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLS-KNGAI 133 (255)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-CCcEE
Confidence 9875 5555543 58999999987431 234566899999996555444 4433 45799
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+..... + ....|+.||+..+.+++..+. .+++
T Consensus 134 v~isS~~~~~~~~---------~----------------------------~~~~Y~asKaa~~~~~~~la~e~~~~~i~ 176 (255)
T PRK06463 134 VNIASNAGIGTAA---------E----------------------------GTTFYAITKAGIIILTRRLAFELGKYGIR 176 (255)
T ss_pred EEEcCHHhCCCCC---------C----------------------------CccHhHHHHHHHHHHHHHHHHHhhhcCeE
Confidence 9999986542110 0 015799999999999887764 5899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
+.+++|+.|-.+....... . ............. .....+...+|++++++.++..... ...|..
T Consensus 177 v~~i~Pg~v~t~~~~~~~~---~-~~~~~~~~~~~~~---------~~~~~~~~~~~va~~~~~l~s~~~~---~~~G~~ 240 (255)
T PRK06463 177 VNAVAPGWVETDMTLSGKS---Q-EEAEKLRELFRNK---------TVLKTTGKPEDIANIVLFLASDDAR---YITGQV 240 (255)
T ss_pred EEEEeeCCCCCchhhcccC---c-cchHHHHHHHHhC---------CCcCCCcCHHHHHHHHHHHcChhhc---CCCCCE
Confidence 9999999774432211000 0 0000011111111 1123456789999999988765432 135778
Q ss_pred EEeecC
Q psy7538 326 CNLTSN 331 (543)
Q Consensus 326 yni~s~ 331 (543)
+.+.++
T Consensus 241 ~~~dgg 246 (255)
T PRK06463 241 IVADGG 246 (255)
T ss_pred EEECCC
Confidence 888766
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.8e-13 Score=135.61 Aligned_cols=227 Identities=15% Similarity=0.129 Sum_probs=145.0
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|+||++++++|++.|+ +|.++.|+.. .++++ .+.+. ....++.++.+|+
T Consensus 8 ~~~k~vlVtGas~giG~~ia~~l~~~G~---~V~~~~r~~~------~~~~~-----~~~~~-----~~~~~~~~~~~Dl 68 (278)
T PRK08277 8 LKGKVAVITGGGGVLGGAMAKELARAGA---KVAILDRNQE------KAEAV-----VAEIK-----AAGGEALAVKADV 68 (278)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHH-----HHHHH-----hcCCeEEEEECCC
Confidence 4789999999999999999999999987 7888888642 11111 11111 1123678899999
Q ss_pred CCCCCCCCHHHHHHHh-------cCccEEEEcCccCCC----------------------cccHHHHHHHHHHHHHHHHH
Q psy7538 108 TQLKLGISEIDKKELI-------DNVDIVYHVAATIRF----------------------DEPIKTAVILNTRGTRDMLE 158 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~----------------------~~~~~~~~~~Nv~gt~~ll~ 158 (543)
++++ ++..++ ..+|++||+|+.... .+.+...+++|+.++..+++
T Consensus 69 ~~~~------~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~ 142 (278)
T PRK08277 69 LDKE------SLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQ 142 (278)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHH
Confidence 9875 455443 368999999985321 13356688999999987766
Q ss_pred HHHhc---cCCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHH
Q psy7538 159 LSKQM---KNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGL 235 (543)
Q Consensus 159 ~a~~~---~~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~ 235 (543)
.+... .+-.++|++||..+...... ...|+.+|+..+.+
T Consensus 143 ~~~~~~~~~~~g~ii~isS~~~~~~~~~--------------------------------------~~~Y~~sK~a~~~l 184 (278)
T PRK08277 143 VFAKDMVGRKGGNIINISSMNAFTPLTK--------------------------------------VPAYSAAKAAISNF 184 (278)
T ss_pred HHHHHHHhcCCcEEEEEccchhcCCCCC--------------------------------------CchhHHHHHHHHHH
Confidence 54331 13468999999866432110 16899999999999
Q ss_pred HHHHhh----cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHh
Q psy7538 236 VAECME----LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFT 311 (543)
Q Consensus 236 v~~~~~----~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~ 311 (543)
++..+. .++.+..++|+.|..+..+.....-+... .......... ....-+...+|+|++++.++
T Consensus 185 ~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~--~~~~~~~~~~---------~p~~r~~~~~dva~~~~~l~ 253 (278)
T PRK08277 185 TQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSL--TERANKILAH---------TPMGRFGKPEELLGTLLWLA 253 (278)
T ss_pred HHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccc--hhHHHHHhcc---------CCccCCCCHHHHHHHHHHHc
Confidence 887655 48999999999997764322110000000 0111111111 11223567899999998877
Q ss_pred hh-hcccCCCCCCcEEEeecC
Q psy7538 312 WD-FLNSKESERKSVCNLTSN 331 (543)
Q Consensus 312 ~~-~~~~~~~~~~~vyni~s~ 331 (543)
.. ... -..+.+..+.++
T Consensus 254 s~~~~~---~~tG~~i~vdgG 271 (278)
T PRK08277 254 DEKASS---FVTGVVLPVDGG 271 (278)
T ss_pred CccccC---CcCCCEEEECCC
Confidence 65 322 124666666554
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=6.4e-14 Score=138.73 Aligned_cols=163 Identities=15% Similarity=0.076 Sum_probs=118.9
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+|+++||||||+||++++++|++.|. +|.++.|+.. .++++. .+. . ..++.++.+|+++
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~G~---~V~~~~r~~~------~~~~~~---------~~~-~--~~~~~~~~~D~~~ 59 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAEGW---RVGAYDINEA------GLAALA---------AEL-G--AGNAWTGALDVTD 59 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCC---eEEEEeCCHH------HHHHHH---------HHh-c--CCceEEEEecCCC
Confidence 37899999999999999999999986 7888888653 222211 000 1 2468899999998
Q ss_pred CCCCCCHHHHHHHhc--------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEEE
Q psy7538 110 LKLGISEIDKKELID--------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFTY 171 (543)
Q Consensus 110 ~~lgls~~~~~~l~~--------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~ 171 (543)
.+ ++.++++ .+|+|||+|+.... .+.++..+++|+.|+.++++++... .+..++|+
T Consensus 60 ~~------~v~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~ 133 (260)
T PRK08267 60 RA------AWDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVIN 133 (260)
T ss_pred HH------HHHHHHHHHHHHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 75 4554433 57999999997532 1345678999999999999888531 24578999
Q ss_pred EecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEE
Q psy7538 172 ISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCM 247 (543)
Q Consensus 172 vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~ 247 (543)
+||..+..... ..+.|+.||+..+.+.+.... .++++.
T Consensus 134 isS~~~~~~~~--------------------------------------~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~ 175 (260)
T PRK08267 134 TSSASAIYGQP--------------------------------------GLAVYSATKFAVRGLTEALDLEWRRHGIRVA 175 (260)
T ss_pred eCchhhCcCCC--------------------------------------CchhhHHHHHHHHHHHHHHHHHhcccCcEEE
Confidence 99975532211 016899999999988877653 579999
Q ss_pred EEecCeeeec
Q psy7538 248 ILRPSIVVPI 257 (543)
Q Consensus 248 IlRps~V~G~ 257 (543)
+++|+.+-..
T Consensus 176 ~i~pg~~~t~ 185 (260)
T PRK08267 176 DVMPLFVDTA 185 (260)
T ss_pred EEecCCcCCc
Confidence 9999987543
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.2e-13 Score=136.93 Aligned_cols=221 Identities=12% Similarity=0.100 Sum_probs=144.6
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||||.||++++++|++.|+ +|.++.|+.. +++++. .....++.++.+|+
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~---~V~~~~r~~~------~~~~~~-------------~~~~~~~~~~~~Dl 61 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAAGA---RVAIVDIDAD------NGAAVA-------------ASLGERARFIATDI 61 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHH-------------HHhCCeeEEEEecC
Confidence 4689999999999999999999999987 7888888642 121111 01124688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC------cccHHHHHHHHHHHHHHHHHHHHh-c-cCCceEEEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF------DEPIKTAVILNTRGTRDMLELSKQ-M-KNLKCFTYI 172 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~------~~~~~~~~~~Nv~gt~~ll~~a~~-~-~~l~~~V~v 172 (543)
++++ ++..+++ .+|++||+|+.... .+.++..+++|+.|+..+++.+.. + ++-.++|++
T Consensus 62 ~~~~------~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~i 135 (261)
T PRK08265 62 TDDA------AIERAVATVVARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNF 135 (261)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEE
Confidence 9875 5555543 57999999986421 244567899999999999888754 2 233689999
Q ss_pred ecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEE
Q psy7538 173 STAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMI 248 (543)
Q Consensus 173 ST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~I 248 (543)
||..+..... . ...|+.+|+..+.+.+..+. +++.+.+
T Consensus 136 sS~~~~~~~~----------~----------------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~ 177 (261)
T PRK08265 136 TSISAKFAQT----------G----------------------------RWLYPASKAAIRQLTRSMAMDLAPDGIRVNS 177 (261)
T ss_pred CchhhccCCC----------C----------------------------CchhHHHHHHHHHHHHHHHHHhcccCEEEEE
Confidence 9975532111 0 05799999999998877654 5899999
Q ss_pred EecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEe
Q psy7538 249 LRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNL 328 (543)
Q Consensus 249 lRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni 328 (543)
++|+.+..+..+...+ +........... .....-+...+|+|+++..++..... ...+.++.+
T Consensus 178 v~PG~~~t~~~~~~~~------~~~~~~~~~~~~--------~~p~~r~~~p~dva~~~~~l~s~~~~---~~tG~~i~v 240 (261)
T PRK08265 178 VSPGWTWSRVMDELSG------GDRAKADRVAAP--------FHLLGRVGDPEEVAQVVAFLCSDAAS---FVTGADYAV 240 (261)
T ss_pred EccCCccChhhhhhcc------cchhHHHHhhcc--------cCCCCCccCHHHHHHHHHHHcCcccc---CccCcEEEE
Confidence 9999765432111000 000000011000 00112245789999999988764322 124677777
Q ss_pred ecC
Q psy7538 329 TSN 331 (543)
Q Consensus 329 ~s~ 331 (543)
.++
T Consensus 241 dgg 243 (261)
T PRK08265 241 DGG 243 (261)
T ss_pred CCC
Confidence 665
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=2e-13 Score=135.52 Aligned_cols=199 Identities=15% Similarity=0.199 Sum_probs=135.1
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
++++|+||||+|+||+.++++|++.|+ +|+++.|+.. +++++. ..+ ....++.++.+|++
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~---~V~~~~r~~~------~~~~~~-----~~~------~~~~~~~~~~~D~~ 63 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGA---RLLLVGRNAE------KLEALA-----ARL------PYPGRHRWVVADLT 63 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEECCHH------HHHHHH-----HHH------hcCCceEEEEccCC
Confidence 678999999999999999999999987 7889998642 222211 111 01247889999999
Q ss_pred CCCCCCCHHHHHHHh------cCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEEEE
Q psy7538 109 QLKLGISEIDKKELI------DNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFTYI 172 (543)
Q Consensus 109 ~~~lgls~~~~~~l~------~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~v 172 (543)
+++ ++..++ ..+|+|||+||.... .+.+...+++|+.|+.++++.+... ++..++|++
T Consensus 64 d~~------~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~i 137 (263)
T PRK09072 64 SEA------GREAVLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNV 137 (263)
T ss_pred CHH------HHHHHHHHHHhcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEe
Confidence 875 444443 358999999997543 1335567899999999999888642 234679999
Q ss_pred ecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEE
Q psy7538 173 STAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMI 248 (543)
Q Consensus 173 ST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~I 248 (543)
||.++..... ....|+.+|+..+.+++..+. .++.+++
T Consensus 138 sS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~ 179 (263)
T PRK09072 138 GSTFGSIGYP--------------------------------------GYASYCASKFALRGFSEALRRELADTGVRVLY 179 (263)
T ss_pred cChhhCcCCC--------------------------------------CccHHHHHHHHHHHHHHHHHHHhcccCcEEEE
Confidence 9875532110 015799999988887766554 4788899
Q ss_pred EecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhh
Q psy7538 249 LRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDF 314 (543)
Q Consensus 249 lRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~ 314 (543)
+.|+.+..+...+ .. .. .. .........++|+|++++.++...
T Consensus 180 v~Pg~~~t~~~~~-----------------~~-~~---~~--~~~~~~~~~~~~va~~i~~~~~~~ 222 (263)
T PRK09072 180 LAPRATRTAMNSE-----------------AV-QA---LN--RALGNAMDDPEDVAAAVLQAIEKE 222 (263)
T ss_pred EecCcccccchhh-----------------hc-cc---cc--ccccCCCCCHHHHHHHHHHHHhCC
Confidence 9988664432110 00 00 00 001124578899999999888764
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=3.1e-13 Score=133.37 Aligned_cols=222 Identities=15% Similarity=0.152 Sum_probs=143.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|.||.+++++|++.|+ +|+++.|+.+ +++++ .+.++. ...++.++.+|+
T Consensus 4 ~~~k~~lItGas~giG~~ia~~l~~~G~---~v~~~~r~~~------~~~~~-----~~~~~~-----~~~~~~~~~~D~ 64 (254)
T PRK07478 4 LNGKVAIITGASSGIGRAAAKLFAREGA---KVVVGARRQA------ELDQL-----VAEIRA-----EGGEAVALAGDV 64 (254)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHH-----HHHHHh-----cCCcEEEEEcCC
Confidence 4689999999999999999999999987 7889998743 22221 111111 124678899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC--------cccHHHHHHHHHHHHHHHHHHHH----hccCCce
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF--------DEPIKTAVILNTRGTRDMLELSK----QMKNLKC 168 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~~a~----~~~~l~~ 168 (543)
++++ +++.+++ .+|++||+|+.... .+.++..+++|+.|+..+.+.+. +. +-.+
T Consensus 65 ~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~-~~~~ 137 (254)
T PRK07478 65 RDEA------YAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLAR-GGGS 137 (254)
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCce
Confidence 9875 5555543 68999999996431 13356689999998887766543 33 4568
Q ss_pred EEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCC
Q psy7538 169 FTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGM 244 (543)
Q Consensus 169 ~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~l 244 (543)
+|++||..+..... | ....|+.||+..+.+.+..+. .++
T Consensus 138 iv~~sS~~~~~~~~---------~----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi 180 (254)
T PRK07478 138 LIFTSTFVGHTAGF---------P----------------------------GMAAYAASKAGLIGLTQVLAAEYGAQGI 180 (254)
T ss_pred EEEEechHhhccCC---------C----------------------------CcchhHHHHHHHHHHHHHHHHHHhhcCE
Confidence 99999975532100 0 016899999999999887655 479
Q ss_pred cEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCc
Q psy7538 245 PCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKS 324 (543)
Q Consensus 245 p~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~ 324 (543)
.+..++|+.|-.+...... ..+. . ....... .....+...+|++++++.++..... -..|.
T Consensus 181 ~v~~v~PG~v~t~~~~~~~------~~~~-~-~~~~~~~--------~~~~~~~~~~~va~~~~~l~s~~~~---~~~G~ 241 (254)
T PRK07478 181 RVNALLPGGTDTPMGRAMG------DTPE-A-LAFVAGL--------HALKRMAQPEEIAQAALFLASDAAS---FVTGT 241 (254)
T ss_pred EEEEEeeCcccCccccccc------CCHH-H-HHHHHhc--------CCCCCCcCHHHHHHHHHHHcCchhc---CCCCC
Confidence 9999999988544211100 0111 1 1111110 0112356789999999887754432 12466
Q ss_pred EEEeecC
Q psy7538 325 VCNLTSN 331 (543)
Q Consensus 325 vyni~s~ 331 (543)
++.+.++
T Consensus 242 ~~~~dgg 248 (254)
T PRK07478 242 ALLVDGG 248 (254)
T ss_pred eEEeCCc
Confidence 6666543
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.2e-13 Score=135.60 Aligned_cols=203 Identities=15% Similarity=0.147 Sum_probs=134.3
Q ss_pred hhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 26 KTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 26 ~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
+..++|+|+||||+|+||.+++++|++.|+ +|+++.|.... .+++. +.++. ....++.++.+
T Consensus 8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~---~Vi~~~r~~~~---~~~~~--------~~l~~----~~~~~~~~~~~ 69 (247)
T PRK08945 8 DLLKDRIILVTGAGDGIGREAALTYARHGA---TVILLGRTEEK---LEAVY--------DEIEA----AGGPQPAIIPL 69 (247)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCC---cEEEEeCCHHH---HHHHH--------HHHHh----cCCCCceEEEe
Confidence 466899999999999999999999999986 78889886421 11221 11211 11235677888
Q ss_pred cCCCCCCCCCHHHHHHH-------hcCccEEEEcCccCCC--------cccHHHHHHHHHHHHHHHHHHHHhc---cCCc
Q psy7538 106 DITQLKLGISEIDKKEL-------IDNVDIVYHVAATIRF--------DEPIKTAVILNTRGTRDMLELSKQM---KNLK 167 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l-------~~~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~ 167 (543)
|+++.+ ++++..+ ...+|+|||+|+.... .+.++..+++|+.|+.++++++... .+..
T Consensus 70 d~~~~~----~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~ 145 (247)
T PRK08945 70 DLLTAT----PQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAA 145 (247)
T ss_pred cccCCC----HHHHHHHHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCC
Confidence 886432 1233332 2368999999986432 1345678999999998888877431 2568
Q ss_pred eEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cC
Q psy7538 168 CFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LG 243 (543)
Q Consensus 168 ~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~ 243 (543)
+||++||..+..... ....|+.||+..|.++..... .+
T Consensus 146 ~iv~~ss~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~~~~~~~~~~ 187 (247)
T PRK08945 146 SLVFTSSSVGRQGRA--------------------------------------NWGAYAVSKFATEGMMQVLADEYQGTN 187 (247)
T ss_pred EEEEEccHhhcCCCC--------------------------------------CCcccHHHHHHHHHHHHHHHHHhcccC
Confidence 999999975432110 015899999999999887655 47
Q ss_pred CcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhh
Q psy7538 244 MPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDF 314 (543)
Q Consensus 244 lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~ 314 (543)
+++.+++|+.+-++...+ .... .....+...+|+++++..++...
T Consensus 188 i~~~~v~pg~v~t~~~~~-----------------~~~~---------~~~~~~~~~~~~~~~~~~~~~~~ 232 (247)
T PRK08945 188 LRVNCINPGGTRTAMRAS-----------------AFPG---------EDPQKLKTPEDIMPLYLYLMGDD 232 (247)
T ss_pred EEEEEEecCCccCcchhh-----------------hcCc---------ccccCCCCHHHHHHHHHHHhCcc
Confidence 888889998774432110 0000 00123567799999998876543
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.1e-13 Score=138.38 Aligned_cols=209 Identities=13% Similarity=0.156 Sum_probs=137.0
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCC-HHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKT-PNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~-~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
++||+++||||+|+||++++++|++.|. +|+++.|+..... ....+++. .+.++ ....++.++.+|
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~l~~~-----~~~~~-----~~~~~~~~~~~D 70 (273)
T PRK08278 4 LSGKTLFITGASRGIGLAIALRAARDGA---NIVIAAKTAEPHPKLPGTIHTA-----AEEIE-----AAGGQALPLVGD 70 (273)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEecccccccchhhHHHHH-----HHHHH-----hcCCceEEEEec
Confidence 5789999999999999999999999986 7888898754321 11112111 11121 112468889999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceE
Q psy7538 107 ITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCF 169 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~ 169 (543)
+++++ ++..+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... .+-.++
T Consensus 71 ~~~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~i 144 (273)
T PRK08278 71 VRDED------QVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHI 144 (273)
T ss_pred CCCHH------HHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEE
Confidence 99875 5555544 68999999997532 1334667899999999999999642 123478
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+.... +.++ ...|+.||+..|.+++.++. +++.
T Consensus 145 v~iss~~~~~~~-------~~~~-----------------------------~~~Y~~sK~a~~~~~~~la~el~~~~I~ 188 (273)
T PRK08278 145 LTLSPPLNLDPK-------WFAP-----------------------------HTAYTMAKYGMSLCTLGLAEEFRDDGIA 188 (273)
T ss_pred EEECCchhcccc-------ccCC-----------------------------cchhHHHHHHHHHHHHHHHHHhhhcCcE
Confidence 888875321110 0001 16899999999999988765 4789
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhc
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFL 315 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~ 315 (543)
+..+.|+.++.+. .......+ ......+...++++++++.++....
T Consensus 189 v~~i~Pg~~i~t~----------------~~~~~~~~--------~~~~~~~~~p~~va~~~~~l~~~~~ 234 (273)
T PRK08278 189 VNALWPRTTIATA----------------AVRNLLGG--------DEAMRRSRTPEIMADAAYEILSRPA 234 (273)
T ss_pred EEEEeCCCccccH----------------HHHhcccc--------cccccccCCHHHHHHHHHHHhcCcc
Confidence 9999997322210 11111001 0111235688999999998876543
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.7e-13 Score=134.00 Aligned_cols=224 Identities=10% Similarity=0.113 Sum_probs=146.7
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||+|.||+.++++|.+.|+ +|.++.|+.. +++++ .+.++... ...++.++.+|+
T Consensus 7 ~~~k~~lItGa~~gIG~~~a~~l~~~G~---~v~~~~r~~~------~~~~~-----~~~l~~~~---~~~~~~~~~~Dl 69 (257)
T PRK09242 7 LDGQTALITGASKGIGLAIAREFLGLGA---DVLIVARDAD------ALAQA-----RDELAEEF---PEREVHGLAADV 69 (257)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHcCC---EEEEEeCCHH------HHHHH-----HHHHHhhC---CCCeEEEEECCC
Confidence 4789999999999999999999999987 7888888642 22211 11121111 124788999999
Q ss_pred CCCCCCCCHHHHHHHh-------cCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELI-------DNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ ++..++ .++|+|||+|+.... .+.++..+++|+.|+.++++++... .+..++|
T Consensus 70 ~~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii 143 (257)
T PRK09242 70 SDDE------DRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIV 143 (257)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEE
Confidence 9875 444433 358999999986321 2446678999999999998887531 2457899
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... ....|+.+|...+.+++..+. .++++
T Consensus 144 ~~sS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v 185 (257)
T PRK09242 144 NIGSVSGLTHVR--------------------------------------SGAPYGMTKAALLQMTRNLAVEWAEDGIRV 185 (257)
T ss_pred EECccccCCCCC--------------------------------------CCcchHHHHHHHHHHHHHHHHHHHHhCeEE
Confidence 999986543211 016799999999998887653 58999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
..++|+.|.++...+ +.. .+ .......... ...-+...+|+++++..++..... ...++.+
T Consensus 186 ~~i~Pg~i~t~~~~~---~~~---~~-~~~~~~~~~~---------~~~~~~~~~~va~~~~~l~~~~~~---~~~g~~i 246 (257)
T PRK09242 186 NAVAPWYIRTPLTSG---PLS---DP-DYYEQVIERT---------PMRRVGEPEEVAAAVAFLCMPAAS---YITGQCI 246 (257)
T ss_pred EEEEECCCCCccccc---ccC---Ch-HHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCcccc---cccCCEE
Confidence 999999887664321 111 11 1221111111 111234568999998877754321 1236666
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
.+.++
T Consensus 247 ~~~gg 251 (257)
T PRK09242 247 AVDGG 251 (257)
T ss_pred EECCC
Confidence 66543
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=9e-14 Score=138.17 Aligned_cols=223 Identities=13% Similarity=0.110 Sum_probs=143.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++++++||||+|+||++++++|++.|+ +|+++.|+... .+.+.+ .+ .....++.++.+|+
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~G~---~V~~~~r~~~~---~~~~~~--------~~-----~~~~~~~~~~~~Dv 67 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARAGA---NVAVASRSQEK---VDAAVA--------QL-----QQAGPEGLGVSADV 67 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHH--------HH-----HHhCCceEEEECCC
Confidence 5789999999999999999999999987 78888887421 111111 11 11123567889999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc--cCCceEEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM--KNLKCFTY 171 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~l~~~V~ 171 (543)
++++ +++.+++ .+|+|||+|+.... .+.++..+++|+.|+.++++++... +.-.++|+
T Consensus 68 ~~~~------~i~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~ 141 (264)
T PRK07576 68 RDYA------AVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQ 141 (264)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEE
Confidence 9865 5555543 47999999975321 2345667899999999999888642 11258999
Q ss_pred EecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEE
Q psy7538 172 ISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCM 247 (543)
Q Consensus 172 vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~ 247 (543)
+||..+.... | ....|+.+|+..|.+++..+. .++.++
T Consensus 142 iss~~~~~~~----------~----------------------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~ 183 (264)
T PRK07576 142 ISAPQAFVPM----------P----------------------------MQAHVCAAKAGVDMLTRTLALEWGPEGIRVN 183 (264)
T ss_pred ECChhhccCC----------C----------------------------CccHHHHHHHHHHHHHHHHHHHhhhcCeEEE
Confidence 9997553211 0 016899999999999887654 579999
Q ss_pred EEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEE
Q psy7538 248 ILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCN 327 (543)
Q Consensus 248 IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyn 327 (543)
.++|+.+.++.. .+.+..+ .......... ..........|+|++++.++..... ...+....
T Consensus 184 ~v~pg~~~~t~~--~~~~~~~----~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~---~~~G~~~~ 245 (264)
T PRK07576 184 SIVPGPIAGTEG--MARLAPS----PELQAAVAQS---------VPLKRNGTKQDIANAALFLASDMAS---YITGVVLP 245 (264)
T ss_pred EEecccccCcHH--HhhcccC----HHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHcChhhc---CccCCEEE
Confidence 999998754321 0111100 0011111110 1123356789999999988864322 12355555
Q ss_pred eecC
Q psy7538 328 LTSN 331 (543)
Q Consensus 328 i~s~ 331 (543)
+.++
T Consensus 246 ~~gg 249 (264)
T PRK07576 246 VDGG 249 (264)
T ss_pred ECCC
Confidence 5554
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.1e-13 Score=136.58 Aligned_cols=169 Identities=17% Similarity=0.147 Sum_probs=123.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||+|+||+++++.|++.|+ +|+++.|+.. +++++. ..++. ...++.++.+|+
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~---~Vi~~~r~~~------~~~~~~-----~~l~~-----~~~~~~~~~~D~ 67 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGA---KVVLASRRVE------RLKELR-----AEIEA-----EGGAAHVVSLDV 67 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHH-----HHHHh-----cCCcEEEEEecC
Confidence 5789999999999999999999999986 7899988642 232221 11111 124678899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cC-----
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KN----- 165 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~----- 165 (543)
++++ ++..+++ .+|+|||+|+.... .+.++..+++|+.|+.++++.+... ..
T Consensus 68 ~~~~------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~ 141 (258)
T PRK06949 68 TDYQ------SIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGN 141 (258)
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCC
Confidence 9875 5655554 58999999996432 1345667899999999998877531 01
Q ss_pred ---CceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-
Q psy7538 166 ---LKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME- 241 (543)
Q Consensus 166 ---l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~- 241 (543)
-.++|++||..+..... ..+.|+.+|+..|.+++..+.
T Consensus 142 ~~~~g~iv~~sS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~~ 183 (258)
T PRK06949 142 TKPGGRIINIASVAGLRVLP--------------------------------------QIGLYCMSKAAVVHMTRAMALE 183 (258)
T ss_pred CCCCeEEEEECcccccCCCC--------------------------------------CccHHHHHHHHHHHHHHHHHHH
Confidence 25899999985532110 116899999999998877654
Q ss_pred ---cCCcEEEEecCeeeecCC
Q psy7538 242 ---LGMPCMILRPSIVVPIYK 259 (543)
Q Consensus 242 ---~~lp~~IlRps~V~G~~~ 259 (543)
.++++++++|+.|.++..
T Consensus 184 ~~~~~i~v~~v~pG~v~t~~~ 204 (258)
T PRK06949 184 WGRHGINVNAICPGYIDTEIN 204 (258)
T ss_pred HHhcCeEEEEEeeCCCcCCcc
Confidence 589999999999987643
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=4.3e-13 Score=132.15 Aligned_cols=222 Identities=12% Similarity=0.109 Sum_probs=145.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||+|+||++++++|++.|. +|+++.|+.+. .+++.+ .+. ....++..+.+|+
T Consensus 5 l~~k~ilItGas~~iG~~ia~~l~~~G~---~v~~~~r~~~~---~~~~~~--------~~~-----~~~~~~~~~~~D~ 65 (253)
T PRK06172 5 FSGKVALVTGGAAGIGRATALAFAREGA---KVVVADRDAAG---GEETVA--------LIR-----EAGGEALFVACDV 65 (253)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCC---EEEEEeCCHHH---HHHHHH--------HHH-----hcCCceEEEEcCC
Confidence 5689999999999999999999999986 78888887532 112211 111 1224688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCC----C----cccHHHHHHHHHHHHHHHHHHHH----hccCCce
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIR----F----DEPIKTAVILNTRGTRDMLELSK----QMKNLKC 168 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~~l~~ 168 (543)
++++ ++..+++ .+|+|||+|+... + .+.++..+++|+.++..+++.+. +. +..+
T Consensus 66 ~~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ 138 (253)
T PRK06172 66 TRDA------EVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQ-GGGA 138 (253)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcE
Confidence 9875 5555443 5799999998642 1 13456678899999987766543 22 4568
Q ss_pred EEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCC
Q psy7538 169 FTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGM 244 (543)
Q Consensus 169 ~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~l 244 (543)
+|++||..+..... ....|+.+|+..|.+.+..+. .++
T Consensus 139 ii~~sS~~~~~~~~--------------------------------------~~~~Y~~sKaa~~~~~~~la~e~~~~~i 180 (253)
T PRK06172 139 IVNTASVAGLGAAP--------------------------------------KMSIYAASKHAVIGLTKSAAIEYAKKGI 180 (253)
T ss_pred EEEECchhhccCCC--------------------------------------CCchhHHHHHHHHHHHHHHHHHhcccCe
Confidence 99999975543211 016899999999998877664 479
Q ss_pred cEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCc
Q psy7538 245 PCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKS 324 (543)
Q Consensus 245 p~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~ 324 (543)
.+.++.|+.|-.+..++.+. ........... . ....-+...+|+++.++.++..... ...|+
T Consensus 181 ~v~~i~PG~v~t~~~~~~~~------~~~~~~~~~~~-~--------~~~~~~~~p~~ia~~~~~l~~~~~~---~~~G~ 242 (253)
T PRK06172 181 RVNAVCPAVIDTDMFRRAYE------ADPRKAEFAAA-M--------HPVGRIGKVEEVASAVLYLCSDGAS---FTTGH 242 (253)
T ss_pred EEEEEEeCCccChhhhhhcc------cChHHHHHHhc-c--------CCCCCccCHHHHHHHHHHHhCcccc---CcCCc
Confidence 99999999885543322110 00111111111 0 0112345789999998888765432 13577
Q ss_pred EEEeecC
Q psy7538 325 VCNLTSN 331 (543)
Q Consensus 325 vyni~s~ 331 (543)
+.++.++
T Consensus 243 ~i~~dgg 249 (253)
T PRK06172 243 ALMVDGG 249 (253)
T ss_pred EEEECCC
Confidence 7777665
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.56 E-value=2e-13 Score=134.16 Aligned_cols=209 Identities=14% Similarity=0.198 Sum_probs=133.8
Q ss_pred EEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCCC
Q psy7538 32 SIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQLK 111 (543)
Q Consensus 32 ~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~~ 111 (543)
+|+||||+|+||+++++.|++.|+ +|+++.|++.. ..+.+.+ .++... ....+..+.+|+++++
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~---~v~~~~r~~~~--~~~~~~~--------~~~~~~---~~~~~~~~~~D~~~~~ 64 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGA---KVFLTDINDAA--GLDAFAA--------EINAAH---GEGVAFAAVQDVTDEA 64 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCcch--HHHHHHH--------HHHhcC---CCceEEEEEeecCCHH
Confidence 389999999999999999999986 78899887321 1122211 111110 1123456789999875
Q ss_pred CCCCHHHHHHHhc-------CccEEEEcCccCCCc-------ccHHHHHHHHHH----HHHHHHHHHHhccCCceEEEEe
Q psy7538 112 LGISEIDKKELID-------NVDIVYHVAATIRFD-------EPIKTAVILNTR----GTRDMLELSKQMKNLKCFTYIS 173 (543)
Q Consensus 112 lgls~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~Nv~----gt~~ll~~a~~~~~l~~~V~vS 173 (543)
+++.+++ .+|+|||+|+..... +.....+++|+. +++.+++++++. +.+++|++|
T Consensus 65 ------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~~s 137 (251)
T PRK07069 65 ------QWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRAS-QPASIVNIS 137 (251)
T ss_pred ------HHHHHHHHHHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCcEEEEec
Confidence 5554443 579999999976431 234557888988 778888888775 678999999
Q ss_pred cCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----c--CCcEE
Q psy7538 174 TAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----L--GMPCM 247 (543)
Q Consensus 174 T~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~--~lp~~ 247 (543)
|..+..... ....|+.+|+..+.+.+..+. + ++.+.
T Consensus 138 s~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~ 179 (251)
T PRK07069 138 SVAAFKAEP--------------------------------------DYTAYNASKAAVASLTKSIALDCARRGLDVRCN 179 (251)
T ss_pred ChhhccCCC--------------------------------------CCchhHHHHHHHHHHHHHHHHHhcccCCcEEEE
Confidence 986543211 015799999999988876543 2 47889
Q ss_pred EEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhh
Q psy7538 248 ILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDF 314 (543)
Q Consensus 248 IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~ 314 (543)
.++|+.+.++...+.... .........+.++. ....+.+++|++++++.++...
T Consensus 180 ~v~pg~v~t~~~~~~~~~----~~~~~~~~~~~~~~---------~~~~~~~~~~va~~~~~l~~~~ 233 (251)
T PRK07069 180 SIHPTFIRTGIVDPIFQR----LGEEEATRKLARGV---------PLGRLGEPDDVAHAVLYLASDE 233 (251)
T ss_pred EEeecccCCcchhHHhhh----ccchhHHHHHhccC---------CCCCCcCHHHHHHHHHHHcCcc
Confidence 999998877643321100 01111111222211 1123457899999988876543
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.3e-13 Score=136.51 Aligned_cols=228 Identities=11% Similarity=0.078 Sum_probs=146.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|+||++++++|++.|. +|.++.|+.. +++++. +.++. .....++.++.+|+
T Consensus 5 l~~k~vlVtGas~gIG~~~a~~l~~~G~---~vv~~~r~~~------~~~~~~-----~~~~~---~~~~~~~~~~~~Dl 67 (260)
T PRK07063 5 LAGKVALVTGAAQGIGAAIARAFAREGA---AVALADLDAA------LAERAA-----AAIAR---DVAGARVLAVPADV 67 (260)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHH-----HHHHh---ccCCceEEEEEccC
Confidence 5789999999999999999999999986 7888888642 222111 11111 01234688899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ ++..+++ .+|++||+||.... .+.++..+++|+.|+..+++++... .+..++|
T Consensus 68 ~~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv 141 (260)
T PRK07063 68 TDAA------SVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIV 141 (260)
T ss_pred CCHH------HHHHHHHHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEE
Confidence 9875 5555544 68999999996432 2345678999999999988887531 2446899
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... ....|+.||+..+.+.+..+. .|+.+
T Consensus 142 ~isS~~~~~~~~--------------------------------------~~~~Y~~sKaa~~~~~~~la~el~~~gIrv 183 (260)
T PRK07063 142 NIASTHAFKIIP--------------------------------------GCFPYPVAKHGLLGLTRALGIEYAARNVRV 183 (260)
T ss_pred EECChhhccCCC--------------------------------------CchHHHHHHHHHHHHHHHHHHHhCccCeEE
Confidence 999986543211 015799999999999887654 57999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
..++|+.|-.+..... | .....+........... ...-+...+|++++++.++..... -..|.+.
T Consensus 184 n~v~PG~v~t~~~~~~--~-~~~~~~~~~~~~~~~~~---------~~~r~~~~~~va~~~~fl~s~~~~---~itG~~i 248 (260)
T PRK07063 184 NAIAPGYIETQLTEDW--W-NAQPDPAAARAETLALQ---------PMKRIGRPEEVAMTAVFLASDEAP---FINATCI 248 (260)
T ss_pred EEEeeCCccChhhhhh--h-hccCChHHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHcCcccc---ccCCcEE
Confidence 9999998754422110 0 00001111111111100 011245679999999888765332 1246666
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
.+.++
T Consensus 249 ~vdgg 253 (260)
T PRK07063 249 TIDGG 253 (260)
T ss_pred EECCC
Confidence 66554
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.6e-13 Score=133.97 Aligned_cols=219 Identities=13% Similarity=0.082 Sum_probs=138.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++|++|+||||||+||++++++|++.|+ +|.++.|++.. +++.. ... +..++.+|+
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~G~---~v~~~~r~~~~------~~~~~-------------~~~--~~~~~~~D~ 60 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAEGA---TVVVGDIDPEA------GKAAA-------------DEV--GGLFVPTDV 60 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCC---EEEEEeCCHHH------HHHHH-------------HHc--CCcEEEeeC
Confidence 6789999999999999999999999987 78888886421 11110 000 124678999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCCc---------ccHHHHHHHHHHHHHHHHHHHHh-c--cCCce
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRFD---------EPIKTAVILNTRGTRDMLELSKQ-M--KNLKC 168 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~~---------~~~~~~~~~Nv~gt~~ll~~a~~-~--~~l~~ 168 (543)
++++ +++.+++ ++|+|||+|+..... +.++..+++|+.|+..+++.+.. + .+..+
T Consensus 61 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~ 134 (255)
T PRK06057 61 TDED------AVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGS 134 (255)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcE
Confidence 9875 5555554 579999999865321 23567899999999888776642 1 14468
Q ss_pred EEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHh----hcCC
Q psy7538 169 FTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECM----ELGM 244 (543)
Q Consensus 169 ~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~----~~~l 244 (543)
+|++||..+..... . ....|+.+|+..+.+.+... ..++
T Consensus 135 iv~~sS~~~~~g~~--------~-----------------------------~~~~Y~~sKaal~~~~~~l~~~~~~~gi 177 (255)
T PRK06057 135 IINTASFVAVMGSA--------T-----------------------------SQISYTASKGGVLAMSRELGVQFARQGI 177 (255)
T ss_pred EEEEcchhhccCCC--------C-----------------------------CCcchHHHHHHHHHHHHHHHHHHHhhCc
Confidence 99999864321100 0 01579999987666665433 2589
Q ss_pred cEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCc
Q psy7538 245 PCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKS 324 (543)
Q Consensus 245 p~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~ 324 (543)
.++++||+.|.++...+. +. ..+........ . + + ...+..++++++++..++..... ...+.
T Consensus 178 ~v~~i~pg~v~t~~~~~~--~~---~~~~~~~~~~~----~-~---~--~~~~~~~~~~a~~~~~l~~~~~~---~~~g~ 239 (255)
T PRK06057 178 RVNALCPGPVNTPLLQEL--FA---KDPERAARRLV----H-V---P--MGRFAEPEEIAAAVAFLASDDAS---FITAS 239 (255)
T ss_pred EEEEEeeCCcCCchhhhh--cc---CCHHHHHHHHh----c-C---C--CCCCcCHHHHHHHHHHHhCcccc---CccCc
Confidence 999999999876643211 00 01111111000 0 0 1 12578899999998776654322 12356
Q ss_pred EEEeecC
Q psy7538 325 VCNLTSN 331 (543)
Q Consensus 325 vyni~s~ 331 (543)
.+.+.++
T Consensus 240 ~~~~~~g 246 (255)
T PRK06057 240 TFLVDGG 246 (255)
T ss_pred EEEECCC
Confidence 6666544
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.5e-13 Score=136.50 Aligned_cols=156 Identities=13% Similarity=0.160 Sum_probs=118.5
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|+||+++++.|++.|. +|.++.|+.... ...++.++.+|+
T Consensus 7 l~~k~vlItG~s~gIG~~la~~l~~~G~---~v~~~~~~~~~~-------------------------~~~~~~~~~~D~ 58 (266)
T PRK06171 7 LQGKIIIVTGGSSGIGLAIVKELLANGA---NVVNADIHGGDG-------------------------QHENYQFVPTDV 58 (266)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCcccc-------------------------ccCceEEEEccC
Confidence 5789999999999999999999999986 777887765321 113677899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC----------------cccHHHHHHHHHHHHHHHHHHHHhc-
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF----------------DEPIKTAVILNTRGTRDMLELSKQM- 163 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~----------------~~~~~~~~~~Nv~gt~~ll~~a~~~- 163 (543)
++++ +++.+++ .+|+|||+||.... .+.++..+++|+.|+..+++++...
T Consensus 59 ~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 132 (266)
T PRK06171 59 SSAE------EVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQM 132 (266)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHH
Confidence 9875 5555443 58999999986321 1335668999999999999888753
Q ss_pred --cCCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh
Q psy7538 164 --KNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME 241 (543)
Q Consensus 164 --~~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~ 241 (543)
.+-.++|++||..+..... ....|+.+|+..+.+++..+.
T Consensus 133 ~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~l~~~la~ 174 (266)
T PRK06171 133 VKQHDGVIVNMSSEAGLEGSE--------------------------------------GQSCYAATKAALNSFTRSWAK 174 (266)
T ss_pred HhcCCcEEEEEccccccCCCC--------------------------------------CCchhHHHHHHHHHHHHHHHH
Confidence 1335799999985542211 016899999999999887654
Q ss_pred ----cCCcEEEEecCeee
Q psy7538 242 ----LGMPCMILRPSIVV 255 (543)
Q Consensus 242 ----~~lp~~IlRps~V~ 255 (543)
+++++.+++|+.+-
T Consensus 175 e~~~~gi~v~~v~pG~~~ 192 (266)
T PRK06171 175 ELGKHNIRVVGVAPGILE 192 (266)
T ss_pred HhhhcCeEEEEEeccccc
Confidence 58999999999874
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=6.7e-14 Score=139.78 Aligned_cols=158 Identities=15% Similarity=0.192 Sum_probs=116.0
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+++||||||+||+++++.|++.|+ +|+++.|+.. +++++. ..++.++.+|++++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~---~V~~~~r~~~------~~~~~~----------------~~~~~~~~~Dl~~~ 56 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY---EVWATARKAE------DVEALA----------------AAGFTAVQLDVNDG 56 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHH----------------HCCCeEEEeeCCCH
Confidence 6899999999999999999999986 7888888642 222211 02466888999986
Q ss_pred CCCCCHHHHHHHh-------cCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc--cCCceEEEEec
Q psy7538 111 KLGISEIDKKELI-------DNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM--KNLKCFTYIST 174 (543)
Q Consensus 111 ~lgls~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~l~~~V~vST 174 (543)
+ +++.++ .++|+|||+|+.... .+.++..+++|+.|+.++++.+... ++..++|++||
T Consensus 57 ~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS 130 (274)
T PRK05693 57 A------ALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGS 130 (274)
T ss_pred H------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECC
Confidence 5 555444 368999999996432 1345668999999999999887542 13468999999
Q ss_pred CccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEEEe
Q psy7538 175 AYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMILR 250 (543)
Q Consensus 175 ~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~IlR 250 (543)
..+.... | ....|+.+|+..|.+...... .|+.+++++
T Consensus 131 ~~~~~~~----------~----------------------------~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~ 172 (274)
T PRK05693 131 VSGVLVT----------P----------------------------FAGAYCASKAAVHALSDALRLELAPFGVQVMEVQ 172 (274)
T ss_pred ccccCCC----------C----------------------------CccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEe
Confidence 7653211 0 016899999998888765443 589999999
Q ss_pred cCeeeec
Q psy7538 251 PSIVVPI 257 (543)
Q Consensus 251 ps~V~G~ 257 (543)
|+.|..+
T Consensus 173 pg~v~t~ 179 (274)
T PRK05693 173 PGAIASQ 179 (274)
T ss_pred cCccccc
Confidence 9988654
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=7e-13 Score=130.70 Aligned_cols=221 Identities=11% Similarity=0.109 Sum_probs=142.4
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
||+++||||+|+||+++++.|++.|. +|+++.|+... .+.+.+ .++ ....++.++.+|+++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~---~Vi~~~r~~~~---~~~~~~--------~~~-----~~~~~~~~~~~D~~~ 61 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA---NVVITGRTKEK---LEEAKL--------EIE-----QFPGQVLTVQMDVRN 61 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHH--------HHH-----hcCCcEEEEEecCCC
Confidence 68999999999999999999999986 78888887421 111211 111 112468899999998
Q ss_pred CCCCCCHHHHHHHh-------cCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cC-CceEEE
Q psy7538 110 LKLGISEIDKKELI-------DNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KN-LKCFTY 171 (543)
Q Consensus 110 ~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~-l~~~V~ 171 (543)
++ +++.++ ..+|+|||+|+.... .+.++..+++|+.|+.++++++.+. ++ -.++|+
T Consensus 62 ~~------~~~~~~~~~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~ 135 (252)
T PRK07677 62 PE------DVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIIN 135 (252)
T ss_pred HH------HHHHHHHHHHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 75 555444 358999999985321 1335668999999999999998542 12 368999
Q ss_pred EecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-----cCCcE
Q psy7538 172 ISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-----LGMPC 246 (543)
Q Consensus 172 vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-----~~lp~ 246 (543)
+||.++..... ....|+.+|+..+.+.+..+. +|+++
T Consensus 136 isS~~~~~~~~--------------------------------------~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v 177 (252)
T PRK07677 136 MVATYAWDAGP--------------------------------------GVIHSAAAKAGVLAMTRTLAVEWGRKYGIRV 177 (252)
T ss_pred EcChhhccCCC--------------------------------------CCcchHHHHHHHHHHHHHHHHHhCcccCeEE
Confidence 99986643211 115799999999988876433 48999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
..++||.|..+.... ..| ........+.+.. ...-+...+|+++++..++..... ...+.++
T Consensus 178 ~~v~PG~v~~~~~~~-~~~-----~~~~~~~~~~~~~---------~~~~~~~~~~va~~~~~l~~~~~~---~~~g~~~ 239 (252)
T PRK07677 178 NAIAPGPIERTGGAD-KLW-----ESEEAAKRTIQSV---------PLGRLGTPEEIAGLAYFLLSDEAA---YINGTCI 239 (252)
T ss_pred EEEeecccccccccc-ccc-----CCHHHHHHHhccC---------CCCCCCCHHHHHHHHHHHcCcccc---ccCCCEE
Confidence 999999887432110 001 0111222222211 112356778999988777654321 1246666
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
.+.++
T Consensus 240 ~~~gg 244 (252)
T PRK07677 240 TMDGG 244 (252)
T ss_pred EECCC
Confidence 66554
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.9e-13 Score=134.62 Aligned_cols=213 Identities=16% Similarity=0.150 Sum_probs=135.4
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+++||||+|+||+++++.|++.|. +|+++.|+.. +++++. +.++ ....++..+.+|++++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~---~v~~~~r~~~------~~~~~~-----~~l~-----~~~~~~~~~~~Dl~~~ 61 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGF---AVAVADLNEE------TAKETA-----KEIN-----QAGGKAVAYKLDVSDK 61 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHH-----HHHH-----hcCCeEEEEEcCCCCH
Confidence 5899999999999999999999986 7888888632 222111 1111 1124688999999987
Q ss_pred CCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHh----ccCCceEEEE
Q psy7538 111 KLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQ----MKNLKCFTYI 172 (543)
Q Consensus 111 ~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~----~~~l~~~V~v 172 (543)
+ ++..+++ .+|+|||+|+.... .+.++..+++|+.++..+++++.. .+.-.++|++
T Consensus 62 ~------~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~ 135 (254)
T TIGR02415 62 D------QVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINA 135 (254)
T ss_pred H------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEe
Confidence 6 5555443 57999999987532 134556799999999888776653 2223689999
Q ss_pred ecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEE
Q psy7538 173 STAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMI 248 (543)
Q Consensus 173 ST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~I 248 (543)
||..+..... . .+.|+.+|+..|.+++.... .++.+.+
T Consensus 136 sS~~~~~~~~----------~----------------------------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~ 177 (254)
T TIGR02415 136 ASIAGHEGNP----------I----------------------------LSAYSSTKFAVRGLTQTAAQELAPKGITVNA 177 (254)
T ss_pred cchhhcCCCC----------C----------------------------CcchHHHHHHHHHHHHHHHHHhcccCeEEEE
Confidence 9975432111 0 16899999999999876554 4799999
Q ss_pred EecCeeeecCCCCCCCCCCCCCc-hHH-HHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhc
Q psy7538 249 LRPSIVVPIYKEPLPGWTDNING-PTG-LLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFL 315 (543)
Q Consensus 249 lRps~V~G~~~~p~~gw~d~~~g-~~~-~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~ 315 (543)
++|+.+..+..+..........+ +.+ ....... ......+..++|+++++..++....
T Consensus 178 v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~a~~~~~l~~~~~ 237 (254)
T TIGR02415 178 YCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSS---------EIALGRPSEPEDVAGLVSFLASEDS 237 (254)
T ss_pred EecCcccChhhhhhhhhhhhcccCchHHHHHHHHh---------hCCCCCCCCHHHHHHHHHhhccccc
Confidence 99998854432111110000000 000 0000000 0111236788999999988887654
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=3e-13 Score=137.44 Aligned_cols=218 Identities=16% Similarity=0.148 Sum_probs=140.5
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
-++||+++||||+|+||++++++|++.|. +|.+..|.... ..+.+. +.++ ....++..+.+|
T Consensus 9 ~l~~k~~lVTGas~gIG~~ia~~L~~~Ga---~Vv~~~~~~~~--~~~~~~--------~~i~-----~~g~~~~~~~~D 70 (306)
T PRK07792 9 DLSGKVAVVTGAAAGLGRAEALGLARLGA---TVVVNDVASAL--DASDVL--------DEIR-----AAGAKAVAVAGD 70 (306)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEecCCchh--HHHHHH--------HHHH-----hcCCeEEEEeCC
Confidence 36899999999999999999999999986 67777765321 111111 1111 112468899999
Q ss_pred CCCCCCCCCHHHHHHHh------cCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc-c--------
Q psy7538 107 ITQLKLGISEIDKKELI------DNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM-K-------- 164 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~------~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~-------- 164 (543)
+++++ ++..++ ..+|+|||+||.... .+.++..+++|+.|+.++++++... .
T Consensus 71 v~d~~------~~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~ 144 (306)
T PRK07792 71 ISQRA------TADELVATAVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGG 144 (306)
T ss_pred CCCHH------HHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCC
Confidence 99875 455444 358999999997642 2345678999999999999887531 0
Q ss_pred -CCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh--
Q psy7538 165 -NLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-- 241 (543)
Q Consensus 165 -~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-- 241 (543)
.-.++|++||..+..... ....|+.+|+..+.+.+..+.
T Consensus 145 ~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaal~~l~~~la~e~ 186 (306)
T PRK07792 145 PVYGRIVNTSSEAGLVGPV--------------------------------------GQANYGAAKAGITALTLSAARAL 186 (306)
T ss_pred CCCcEEEEECCcccccCCC--------------------------------------CCchHHHHHHHHHHHHHHHHHHh
Confidence 124899999975432110 015799999999999876554
Q ss_pred --cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCC
Q psy7538 242 --LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKE 319 (543)
Q Consensus 242 --~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~ 319 (543)
+|+++..+.|+. .+ +... . .+ ...... .....+.++.+++++++..++.....
T Consensus 187 ~~~gI~vn~i~Pg~--~t---~~~~---~------~~----~~~~~~----~~~~~~~~~pe~va~~v~~L~s~~~~--- 241 (306)
T PRK07792 187 GRYGVRANAICPRA--RT---AMTA---D------VF----GDAPDV----EAGGIDPLSPEHVVPLVQFLASPAAA--- 241 (306)
T ss_pred hhcCeEEEEECCCC--CC---chhh---h------hc----cccchh----hhhccCCCCHHHHHHHHHHHcCcccc---
Confidence 589999999973 11 1000 0 00 000000 00112345789999988777654321
Q ss_pred CCCCcEEEeecC
Q psy7538 320 SERKSVCNLTSN 331 (543)
Q Consensus 320 ~~~~~vyni~s~ 331 (543)
...|++|.+.++
T Consensus 242 ~~tG~~~~v~gg 253 (306)
T PRK07792 242 EVNGQVFIVYGP 253 (306)
T ss_pred CCCCCEEEEcCC
Confidence 135778887665
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=5.7e-13 Score=134.72 Aligned_cols=209 Identities=11% Similarity=0.035 Sum_probs=139.7
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++|++|+||||+|.||..+++.|.+.|. +|+++.|+. ++++++.+ .+ . ...++..+.+|+
T Consensus 7 l~gk~vlItGas~gIG~~ia~~l~~~G~---~V~~~~r~~------~~l~~~~~-----~l-----~-~~~~~~~~~~Dv 66 (296)
T PRK05872 7 LAGKVVVVTGAARGIGAELARRLHARGA---KLALVDLEE------AELAALAA-----EL-----G-GDDRVLTVVADV 66 (296)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHHH-----Hh-----c-CCCcEEEEEecC
Confidence 5789999999999999999999999986 788888864 23322211 11 1 123566777999
Q ss_pred CCCCCCCCHHHHHHHh-------cCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc--cCCceEEE
Q psy7538 108 TQLKLGISEIDKKELI-------DNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM--KNLKCFTY 171 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~l~~~V~ 171 (543)
++++ +++.++ ..+|+|||+||.... .+.++..+++|+.|+.++++.+... ++..++|+
T Consensus 67 ~d~~------~v~~~~~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~ 140 (296)
T PRK05872 67 TDLA------AMQAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQ 140 (296)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEE
Confidence 9875 454443 358999999997532 2445678999999999999988642 12358999
Q ss_pred EecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEE
Q psy7538 172 ISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCM 247 (543)
Q Consensus 172 vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~ 247 (543)
+||..+...... ...|+.||+..+.+.+.... .|+.+.
T Consensus 141 isS~~~~~~~~~--------------------------------------~~~Y~asKaal~~~~~~l~~e~~~~gi~v~ 182 (296)
T PRK05872 141 VSSLAAFAAAPG--------------------------------------MAAYCASKAGVEAFANALRLEVAHHGVTVG 182 (296)
T ss_pred EeCHhhcCCCCC--------------------------------------chHHHHHHHHHHHHHHHHHHHHHHHCcEEE
Confidence 999866432110 15899999999999876543 589999
Q ss_pred EEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhh
Q psy7538 248 ILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDF 314 (543)
Q Consensus 248 IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~ 314 (543)
++.|+.|..+...... .............. ......++.+|++++++.++...
T Consensus 183 ~v~Pg~v~T~~~~~~~-------~~~~~~~~~~~~~~-------~p~~~~~~~~~va~~i~~~~~~~ 235 (296)
T PRK05872 183 SAYLSWIDTDLVRDAD-------ADLPAFRELRARLP-------WPLRRTTSVEKCAAAFVDGIERR 235 (296)
T ss_pred EEecCcccchhhhhcc-------ccchhHHHHHhhCC-------CcccCCCCHHHHHHHHHHHHhcC
Confidence 9999887554321110 00011111111110 11234578999999999887654
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.5e-13 Score=132.33 Aligned_cols=216 Identities=13% Similarity=0.131 Sum_probs=138.6
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||+|+||++++++|++.|. +|+++.|... ++++++. .+ .++.++.+|+
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~~~G~---~v~~~~~~~~-----~~~~~l~---------~~------~~~~~~~~D~ 60 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFVTDGA---NVRFTYAGSK-----DAAERLA---------QE------TGATAVQTDS 60 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEecCCCH-----HHHHHHH---------HH------hCCeEEecCC
Confidence 4689999999999999999999999986 6766666431 2222211 00 1345778999
Q ss_pred CCCCCCCCHHHHHHHhc---CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHh-ccCCceEEEEecCc
Q psy7538 108 TQLKLGISEIDKKELID---NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQ-MKNLKCFTYISTAY 176 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~---~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-~~~l~~~V~vST~y 176 (543)
++.+ .+..+++ .+|++||+|+.... .+.++..+++|+.|+..++..+.. ++.-.++|++||..
T Consensus 61 ~~~~------~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~ 134 (237)
T PRK12742 61 ADRD------AVIDVVRKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVN 134 (237)
T ss_pred CCHH------HHHHHHHHhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccc
Confidence 8764 4544443 48999999987532 134567899999999999755544 33346999999975
Q ss_pred cccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEEEecC
Q psy7538 177 CHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMILRPS 252 (543)
Q Consensus 177 ~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~IlRps 252 (543)
+... +.+ ....|+.+|+..|.+++..+. .++.+.+++|+
T Consensus 135 ~~~~---------~~~----------------------------~~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg 177 (237)
T PRK12742 135 GDRM---------PVA----------------------------GMAAYAASKSALQGMARGLARDFGPRGITINVVQPG 177 (237)
T ss_pred cccC---------CCC----------------------------CCcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecC
Confidence 4210 000 016899999999999877544 57999999999
Q ss_pred eeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecC
Q psy7538 253 IVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSN 331 (543)
Q Consensus 253 ~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~ 331 (543)
.|..+.... ..+ ....... .. ...-+...+|+++++..++..... ...+.++.+.++
T Consensus 178 ~~~t~~~~~--------~~~--~~~~~~~-~~--------~~~~~~~p~~~a~~~~~l~s~~~~---~~~G~~~~~dgg 234 (237)
T PRK12742 178 PIDTDANPA--------NGP--MKDMMHS-FM--------AIKRHGRPEEVAGMVAWLAGPEAS---FVTGAMHTIDGA 234 (237)
T ss_pred cccCCcccc--------ccH--HHHHHHh-cC--------CCCCCCCHHHHHHHHHHHcCcccC---cccCCEEEeCCC
Confidence 886543210 111 1111111 00 011245789999998887754322 124666666543
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=5.7e-13 Score=136.58 Aligned_cols=204 Identities=13% Similarity=0.152 Sum_probs=135.8
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||||.||++++++|++.|. +|+++.|+. ++++++. +.++ ....++.++.+|+
T Consensus 5 l~~k~vlITGAs~GIG~aia~~la~~G~---~Vvl~~R~~------~~l~~~~-----~~~~-----~~g~~~~~~~~Dv 65 (330)
T PRK06139 5 LHGAVVVITGASSGIGQATAEAFARRGA---RLVLAARDE------EALQAVA-----EECR-----ALGAEVLVVPTDV 65 (330)
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHH-----HHHH-----hcCCcEEEEEeeC
Confidence 4679999999999999999999999987 788888864 2333221 1111 1124677889999
Q ss_pred CCCCCCCCHHHHHHHh-------cCccEEEEcCccCCC---c----ccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELI-------DNVDIVYHVAATIRF---D----EPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~---~----~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ +++.++ ..+|++||+|+...+ . +.++..+++|+.|+.++.+++... .+..++|
T Consensus 66 ~d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV 139 (330)
T PRK06139 66 TDAD------QVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFI 139 (330)
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEE
Confidence 9875 566554 358999999986432 1 345568999999999988776431 1346899
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHH----Hhh-cCCc
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAE----CME-LGMP 245 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~----~~~-~~lp 245 (543)
++||..+.... | ....|+.||+..+.+.+. ... .++.
T Consensus 140 ~isS~~~~~~~----------p----------------------------~~~~Y~asKaal~~~~~sL~~El~~~~gI~ 181 (330)
T PRK06139 140 NMISLGGFAAQ----------P----------------------------YAAAYSASKFGLRGFSEALRGELADHPDIH 181 (330)
T ss_pred EEcChhhcCCC----------C----------------------------CchhHHHHHHHHHHHHHHHHHHhCCCCCeE
Confidence 99997543221 1 116899999965555444 333 3799
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhc
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFL 315 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~ 315 (543)
++.+.|+.|..+..+. ..+. .+. .......++..+++|++++.++.++.
T Consensus 182 V~~v~Pg~v~T~~~~~----~~~~-----------~~~------~~~~~~~~~~pe~vA~~il~~~~~~~ 230 (330)
T PRK06139 182 VCDVYPAFMDTPGFRH----GANY-----------TGR------RLTPPPPVYDPRRVAKAVVRLADRPR 230 (330)
T ss_pred EEEEecCCccCccccc----cccc-----------ccc------cccCCCCCCCHHHHHHHHHHHHhCCC
Confidence 9999999886653211 0000 000 01112346789999999998886643
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.5e-12 Score=123.16 Aligned_cols=208 Identities=14% Similarity=0.109 Sum_probs=145.8
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
..++|.++|||||+-||.++++.|.+.|+ +|.+..|+ ++||+++-+ +. .. .++.++..|
T Consensus 3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~---~vvl~aRR------~drL~~la~---------~~-~~--~~~~~~~~D 61 (246)
T COG4221 3 TLKGKVALITGASSGIGEATARALAEAGA---KVVLAARR------EERLEALAD---------EI-GA--GAALALALD 61 (246)
T ss_pred CCCCcEEEEecCcchHHHHHHHHHHHCCC---eEEEEecc------HHHHHHHHH---------hh-cc--CceEEEeec
Confidence 34679999999999999999999999997 89999997 467766532 11 11 468899999
Q ss_pred CCCCCCCCCHHHHHHHh-------cCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceE
Q psy7538 107 ITQLKLGISEIDKKELI-------DNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCF 169 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~ 169 (543)
++|.+ +++.++ ..+|++||.||.... .+.++.++++|+.|..+..++..-. .+-..+
T Consensus 62 VtD~~------~~~~~i~~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~I 135 (246)
T COG4221 62 VTDRA------AVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHI 135 (246)
T ss_pred cCCHH------HHHHHHHHHHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceE
Confidence 99985 433333 369999999997643 2457789999999998888776421 144599
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|.+||..+.-. || - -+.|+.||+....+....+. ++++
T Consensus 136 iN~~SiAG~~~--------y~--~----------------------------~~vY~ATK~aV~~fs~~LR~e~~g~~IR 177 (246)
T COG4221 136 INLGSIAGRYP--------YP--G----------------------------GAVYGATKAAVRAFSLGLRQELAGTGIR 177 (246)
T ss_pred EEecccccccc--------CC--C----------------------------CccchhhHHHHHHHHHHHHHHhcCCCee
Confidence 99999865321 11 1 17999999988887766554 5899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcc
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLN 316 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~ 316 (543)
++.+-|+.|-.+...-++ + .|-..-..... .....+..+|+|+++..++..+..
T Consensus 178 Vt~I~PG~v~~~~~s~v~---~--~g~~~~~~~~y------------~~~~~l~p~dIA~~V~~~~~~P~~ 231 (246)
T COG4221 178 VTVISPGLVETTEFSTVR---F--EGDDERADKVY------------KGGTALTPEDIAEAVLFAATQPQH 231 (246)
T ss_pred EEEecCceecceeccccc---C--CchhhhHHHHh------------ccCCCCCHHHHHHHHHHHHhCCCc
Confidence 999999988554221111 0 11001111111 234567889999999999988764
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.2e-13 Score=135.40 Aligned_cols=159 Identities=16% Similarity=0.128 Sum_probs=114.8
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+|+++||||||+||++++++|++.|+ +|.++.|+.... +. .....++.++.+|+++
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G~---~v~~~~r~~~~~-----~~----------------~~~~~~~~~~~~D~~~ 56 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPGI---AVLGVARSRHPS-----LA----------------AAAGERLAEVELDLSD 56 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCCC---EEEEEecCcchh-----hh----------------hccCCeEEEEEeccCC
Confidence 36899999999999999999999986 788888875321 10 1112468889999998
Q ss_pred CCCCCCHHHHHHHh-----------cCccEEEEcCccCCC--------cccHHHHHHHHHHHHHHHHHHHHhc---cCCc
Q psy7538 110 LKLGISEIDKKELI-----------DNVDIVYHVAATIRF--------DEPIKTAVILNTRGTRDMLELSKQM---KNLK 167 (543)
Q Consensus 110 ~~lgls~~~~~~l~-----------~~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~ 167 (543)
++ +++.++ ..+|++||+|+.... .+.+...+++|+.|+..+.+.+.+. .+..
T Consensus 57 ~~------~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 130 (243)
T PRK07023 57 AA------AAAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAER 130 (243)
T ss_pred HH------HHHHHHHHHHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCC
Confidence 76 444422 147899999987532 1335667899999977776665432 2456
Q ss_pred eEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh---cCC
Q psy7538 168 CFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME---LGM 244 (543)
Q Consensus 168 ~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~---~~l 244 (543)
++|++||..+..... ....|+.+|+..|.+++.+.. .++
T Consensus 131 ~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~~~~~~~~~i 172 (243)
T PRK07023 131 RILHISSGAARNAYA--------------------------------------GWSVYCATKAALDHHARAVALDANRAL 172 (243)
T ss_pred EEEEEeChhhcCCCC--------------------------------------CchHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 999999975432111 016899999999999987664 489
Q ss_pred cEEEEecCeeee
Q psy7538 245 PCMILRPSIVVP 256 (543)
Q Consensus 245 p~~IlRps~V~G 256 (543)
.+.+++|+.+-.
T Consensus 173 ~v~~v~pg~~~t 184 (243)
T PRK07023 173 RIVSLAPGVVDT 184 (243)
T ss_pred EEEEecCCcccc
Confidence 999999987643
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.6e-13 Score=133.22 Aligned_cols=220 Identities=13% Similarity=0.122 Sum_probs=135.6
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
.|+|+||||+|+||+.+++.|++.|+ +|.++.+... ++.+++ .+.++ ....++..+.+|+++
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~---~v~~~~~~~~-----~~~~~~-----~~~~~-----~~~~~~~~~~~Dl~~ 63 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGW---SVGINYARDA-----AAAEET-----ADAVR-----AAGGRACVVAGDVAN 63 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCC---EEEEEeCCCH-----HHHHHH-----HHHHH-----hcCCcEEEEEeccCC
Confidence 36899999999999999999999986 5655544321 111111 11111 112468899999998
Q ss_pred CCCCCCHHHHHHHh-------cCccEEEEcCccCCC--------cccHHHHHHHHHHHHHHHHHHH-HhccC-----Cce
Q psy7538 110 LKLGISEIDKKELI-------DNVDIVYHVAATIRF--------DEPIKTAVILNTRGTRDMLELS-KQMKN-----LKC 168 (543)
Q Consensus 110 ~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~~a-~~~~~-----l~~ 168 (543)
++ +++.++ ..+|+|||+|+.... .+.+...+++|+.|+..+++.+ ..+.. -.+
T Consensus 64 ~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ 137 (248)
T PRK06947 64 EA------DVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGA 137 (248)
T ss_pred HH------HHHHHHHHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcE
Confidence 75 444433 358999999986421 1234557899999998887544 33311 135
Q ss_pred EEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCC
Q psy7538 169 FTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGM 244 (543)
Q Consensus 169 ~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~l 244 (543)
+|++||..+..... . ....|+.||+..+.+++..+. .++
T Consensus 138 ii~~sS~~~~~~~~----------~---------------------------~~~~Y~~sK~~~~~~~~~la~~~~~~~i 180 (248)
T PRK06947 138 IVNVSSIASRLGSP----------N---------------------------EYVDYAGSKGAVDTLTLGLAKELGPHGV 180 (248)
T ss_pred EEEECchhhcCCCC----------C---------------------------CCcccHhhHHHHHHHHHHHHHHhhhhCc
Confidence 99999975432100 0 004799999999988877654 479
Q ss_pred cEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCc
Q psy7538 245 PCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKS 324 (543)
Q Consensus 245 p~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~ 324 (543)
+++++||+.|..+.... + ..+. ....... . . + ..-...++|++++++.++..... ...|.
T Consensus 181 ~v~~i~Pg~v~t~~~~~------~-~~~~-~~~~~~~-~-~-----~--~~~~~~~e~va~~~~~l~~~~~~---~~~G~ 240 (248)
T PRK06947 181 RVNAVRPGLIETEIHAS------G-GQPG-RAARLGA-Q-T-----P--LGRAGEADEVAETIVWLLSDAAS---YVTGA 240 (248)
T ss_pred EEEEEeccCcccccccc------c-CCHH-HHHHHhh-c-C-----C--CCCCcCHHHHHHHHHHHcCcccc---CcCCc
Confidence 99999999886653210 0 0111 1111110 0 0 0 11135789999999887765432 12455
Q ss_pred EEEeec
Q psy7538 325 VCNLTS 330 (543)
Q Consensus 325 vyni~s 330 (543)
.+.+.+
T Consensus 241 ~~~~~g 246 (248)
T PRK06947 241 LLDVGG 246 (248)
T ss_pred eEeeCC
Confidence 665543
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.52 E-value=3.3e-13 Score=150.78 Aligned_cols=232 Identities=14% Similarity=0.124 Sum_probs=146.9
Q ss_pred hhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 26 KTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 26 ~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
..+++|+|+||||+|+||++++++|++.|. +|.++.|+... ++++ .+.+... ....++..+.+
T Consensus 410 ~~l~gkvvLVTGasggIG~aiA~~La~~Ga---~Vvi~~r~~~~------~~~~-----~~~l~~~---~~~~~~~~v~~ 472 (676)
T TIGR02632 410 KTLARRVAFVTGGAGGIGRETARRLAAEGA---HVVLADLNLEA------AEAV-----AAEINGQ---FGAGRAVALKM 472 (676)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHhCCC---EEEEEeCCHHH------HHHH-----HHHHHhh---cCCCcEEEEEC
Confidence 346789999999999999999999999986 78888886421 2111 1111111 11235778899
Q ss_pred cCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHH----hccCCc
Q psy7538 106 DITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSK----QMKNLK 167 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~----~~~~l~ 167 (543)
|+++++ ++..+++ ++|+|||+|+.... .+.+...+++|+.|...+.+.+. +.+.-.
T Consensus 473 Dvtd~~------~v~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g 546 (676)
T TIGR02632 473 DVTDEQ------AVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGG 546 (676)
T ss_pred CCCCHH------HHHHHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 999875 5666554 68999999996532 13355678899998877764443 221125
Q ss_pred eEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cC
Q psy7538 168 CFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LG 243 (543)
Q Consensus 168 ~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~ 243 (543)
++|++||..+.... | ....|+.||+..|.+++.++. .|
T Consensus 547 ~IV~iSS~~a~~~~----------~----------------------------~~~aY~aSKaA~~~l~r~lA~el~~~g 588 (676)
T TIGR02632 547 NIVFIASKNAVYAG----------K----------------------------NASAYSAAKAAEAHLARCLAAEGGTYG 588 (676)
T ss_pred EEEEEeChhhcCCC----------C----------------------------CCHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 89999997442211 0 016899999999999987655 47
Q ss_pred CcEEEEecCeee-ecCCCCCCCCCCCCC---c--hHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhccc
Q psy7538 244 MPCMILRPSIVV-PIYKEPLPGWTDNIN---G--PTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNS 317 (543)
Q Consensus 244 lp~~IlRps~V~-G~~~~p~~gw~d~~~---g--~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~ 317 (543)
+.+..++|+.|+ |+..- -.+|..... + ...+... +.........+..+|+|+++..++.....
T Consensus 589 IrVn~V~Pg~V~~~s~~~-~~~~~~~~~~~~~~~~~~~~~~---------~~~r~~l~r~v~peDVA~av~~L~s~~~~- 657 (676)
T TIGR02632 589 IRVNTVNPDAVLQGSGIW-DGEWREERAAAYGIPADELEEH---------YAKRTLLKRHIFPADIAEAVFFLASSKSE- 657 (676)
T ss_pred eEEEEEECCceecCcccc-cccchhhhhhcccCChHHHHHH---------HHhcCCcCCCcCHHHHHHHHHHHhCCccc-
Confidence 999999999886 32110 011211100 0 0000000 11122234568889999999987654322
Q ss_pred CCCCCCcEEEeecC
Q psy7538 318 KESERKSVCNLTSN 331 (543)
Q Consensus 318 ~~~~~~~vyni~s~ 331 (543)
...+.++++.++
T Consensus 658 --~~TG~~i~vDGG 669 (676)
T TIGR02632 658 --KTTGCIITVDGG 669 (676)
T ss_pred --CCcCcEEEECCC
Confidence 134778888776
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=6.9e-13 Score=125.93 Aligned_cols=185 Identities=17% Similarity=0.216 Sum_probs=130.0
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+++||||+|.||++++++|.+. . +|.++.|+.. .+.+|++++
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~---~vi~~~r~~~---------------------------------~~~~D~~~~ 43 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-H---EVITAGRSSG---------------------------------DVQVDITDP 43 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-C---cEEEEecCCC---------------------------------ceEecCCCh
Confidence 58999999999999999999987 4 7888888531 356899987
Q ss_pred CCCCCHHHHHHHhc---CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHh-ccCCceEEEEecCcccc
Q psy7538 111 KLGISEIDKKELID---NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQ-MKNLKCFTYISTAYCHP 179 (543)
Q Consensus 111 ~lgls~~~~~~l~~---~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-~~~l~~~V~vST~y~~~ 179 (543)
+ +++.+++ ++|+|||+||.... .+.+...+++|+.|+.++++++.. +.+-.+++++||..+..
T Consensus 44 ~------~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~ 117 (199)
T PRK07578 44 A------SIRALFEKVGKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDE 117 (199)
T ss_pred H------HHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCC
Confidence 5 5666555 68999999996432 234566789999999999998865 22336799999876532
Q ss_pred CCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh---cCCcEEEEecCeeee
Q psy7538 180 SEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME---LGMPCMILRPSIVVP 256 (543)
Q Consensus 180 ~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~---~~lp~~IlRps~V~G 256 (543)
... . ...|+.+|+..+.+.+..+. .++.+..++|+.|-.
T Consensus 118 ~~~----------~----------------------------~~~Y~~sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t 159 (199)
T PRK07578 118 PIP----------G----------------------------GASAATVNGALEGFVKAAALELPRGIRINVVSPTVLTE 159 (199)
T ss_pred CCC----------C----------------------------chHHHHHHHHHHHHHHHHHHHccCCeEEEEEcCCcccC
Confidence 110 0 16899999999988876544 478888888886522
Q ss_pred cCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEee
Q psy7538 257 IYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLT 329 (543)
Q Consensus 257 ~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~ 329 (543)
+.. .. +. .+. ....++.+|+|++++.++.... .+++++++
T Consensus 160 ~~~------------------~~--~~--~~~-----~~~~~~~~~~a~~~~~~~~~~~------~g~~~~~~ 199 (199)
T PRK07578 160 SLE------------------KY--GP--FFP-----GFEPVPAARVALAYVRSVEGAQ------TGEVYKVG 199 (199)
T ss_pred chh------------------hh--hh--cCC-----CCCCCCHHHHHHHHHHHhccce------eeEEeccC
Confidence 100 00 00 011 1236899999999988886543 36777653
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.5e-13 Score=133.05 Aligned_cols=219 Identities=11% Similarity=0.106 Sum_probs=142.0
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||+|.||++++++|++.|. +|.++.|... .+..+++ . ....++..+.+|+
T Consensus 8 l~~k~~lItG~~~gIG~a~a~~l~~~G~---~vv~~~~~~~----~~~~~~~---------~-----~~~~~~~~~~~Dl 66 (253)
T PRK08993 8 LEGKVAVVTGCDTGLGQGMALGLAEAGC---DIVGINIVEP----TETIEQV---------T-----ALGRRFLSLTADL 66 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEecCcch----HHHHHHH---------H-----hcCCeEEEEECCC
Confidence 6789999999999999999999999987 6666655431 1111111 1 1123678899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cC-CceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KN-LKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~-l~~~ 169 (543)
++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++++++... ++ -.++
T Consensus 67 ~~~~------~~~~~~~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~i 140 (253)
T PRK08993 67 RKID------GIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKI 140 (253)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEE
Confidence 9865 5555543 58999999997532 2456778999999999999887542 11 2579
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+...... -..|+.+|+..|.+.+..+. .|+.
T Consensus 141 v~isS~~~~~~~~~--------------------------------------~~~Y~~sKaa~~~~~~~la~e~~~~gi~ 182 (253)
T PRK08993 141 INIASMLSFQGGIR--------------------------------------VPSYTASKSGVMGVTRLMANEWAKHNIN 182 (253)
T ss_pred EEECchhhccCCCC--------------------------------------CcchHHHHHHHHHHHHHHHHHhhhhCeE
Confidence 99999865432110 05799999999988877654 5899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
+..++||.|-.+..... ...........+.. +. .-+...+|++++++.++..... ...|.+
T Consensus 183 v~~v~pG~v~T~~~~~~-------~~~~~~~~~~~~~~-------p~--~r~~~p~eva~~~~~l~s~~~~---~~~G~~ 243 (253)
T PRK08993 183 VNAIAPGYMATNNTQQL-------RADEQRSAEILDRI-------PA--GRWGLPSDLMGPVVFLASSASD---YINGYT 243 (253)
T ss_pred EEEEeeCcccCcchhhh-------ccchHHHHHHHhcC-------CC--CCCcCHHHHHHHHHHHhCcccc---CccCcE
Confidence 99999998855422110 00000111111110 11 1255679999999888765432 124556
Q ss_pred EEeec
Q psy7538 326 CNLTS 330 (543)
Q Consensus 326 yni~s 330 (543)
+.+.+
T Consensus 244 ~~~dg 248 (253)
T PRK08993 244 IAVDG 248 (253)
T ss_pred EEECC
Confidence 65543
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.4e-12 Score=125.24 Aligned_cols=206 Identities=17% Similarity=0.157 Sum_probs=142.1
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
..++++++||||||-||..++++|.++|+ +|.++.|+. +||.++ .+.|..+ ..-.+.++..|
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~---~liLvaR~~------~kL~~l-----a~~l~~~----~~v~v~vi~~D 64 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGY---NLILVARRE------DKLEAL-----AKELEDK----TGVEVEVIPAD 64 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCcH------HHHHHH-----HHHHHHh----hCceEEEEECc
Confidence 46789999999999999999999999997 889999974 556554 2233322 23467899999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCCc-------ccHHHHHHHHHHHHHHHHHHHHh-c--cCCceE
Q psy7538 107 ITQLKLGISEIDKKELID-------NVDIVYHVAATIRFD-------EPIKTAVILNTRGTRDMLELSKQ-M--KNLKCF 169 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~Nv~gt~~ll~~a~~-~--~~l~~~ 169 (543)
+++++ ++..+.+ .+|++|++||...+. +...+.+++|+.++..|-.+... + .+-..+
T Consensus 65 Ls~~~------~~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~I 138 (265)
T COG0300 65 LSDPE------ALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHI 138 (265)
T ss_pred CCChh------HHHHHHHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceE
Confidence 99987 5555543 499999999987542 34566899999998877666533 1 145689
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|.++|..+..+. |. -..|+.||+..-.+-..... +|+.
T Consensus 139 iNI~S~ag~~p~----------p~----------------------------~avY~ATKa~v~~fSeaL~~EL~~~gV~ 180 (265)
T COG0300 139 INIGSAAGLIPT----------PY----------------------------MAVYSATKAFVLSFSEALREELKGTGVK 180 (265)
T ss_pred EEEechhhcCCC----------cc----------------------------hHHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 999999775432 11 17999999866554443332 6899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcc
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLN 316 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~ 316 (543)
+..+-|+.+..... . ..+.... ......-++..++||++.+.++.+...
T Consensus 181 V~~v~PG~~~T~f~-----------------~--~~~~~~~---~~~~~~~~~~~~~va~~~~~~l~~~k~ 229 (265)
T COG0300 181 VTAVCPGPTRTEFF-----------------D--AKGSDVY---LLSPGELVLSPEDVAEAALKALEKGKR 229 (265)
T ss_pred EEEEecCccccccc-----------------c--ccccccc---cccchhhccCHHHHHHHHHHHHhcCCc
Confidence 99999997644321 1 0111000 011234567889999999988876543
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.1e-13 Score=134.55 Aligned_cols=220 Identities=12% Similarity=0.121 Sum_probs=143.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||+|.||++++++|++.|. +|.++.|... +...+. + .....++.++.+|+
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~---~vv~~~~~~~-----~~~~~~--------~-----~~~~~~~~~~~~Dl 64 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLAKAGA---DIVGVGVAEA-----PETQAQ--------V-----EALGRKFHFITADL 64 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEecCchH-----HHHHHH--------H-----HHcCCeEEEEEeCC
Confidence 4689999999999999999999999987 6777777531 111111 1 11124688899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cC-CceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KN-LKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~-l~~~ 169 (543)
++++ +++.+++ ++|++||+|+.... .+.++..+++|+.|+..+.+.+... ++ -.++
T Consensus 65 ~~~~------~~~~~~~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~i 138 (251)
T PRK12481 65 IQQK------DIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKI 138 (251)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEE
Confidence 9876 5665554 58999999996532 2446678999999999888877542 12 3589
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+...... ...|+.||+..+.+++..+. +|++
T Consensus 139 i~isS~~~~~~~~~--------------------------------------~~~Y~asK~a~~~l~~~la~e~~~~gir 180 (251)
T PRK12481 139 INIASMLSFQGGIR--------------------------------------VPSYTASKSAVMGLTRALATELSQYNIN 180 (251)
T ss_pred EEeCChhhcCCCCC--------------------------------------CcchHHHHHHHHHHHHHHHHHHhhcCeE
Confidence 99999865432110 05799999999998876554 5899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
+..++||.|-.+..... .............. + ...+...+|+++++..++..... ...+.+
T Consensus 181 vn~v~PG~v~t~~~~~~-------~~~~~~~~~~~~~~-------p--~~~~~~peeva~~~~~L~s~~~~---~~~G~~ 241 (251)
T PRK12481 181 VNAIAPGYMATDNTAAL-------RADTARNEAILERI-------P--ASRWGTPDDLAGPAIFLSSSASD---YVTGYT 241 (251)
T ss_pred EEEEecCCCccCchhhc-------ccChHHHHHHHhcC-------C--CCCCcCHHHHHHHHHHHhCcccc---CcCCce
Confidence 99999998754321110 00001111111111 1 11346789999999887754332 124556
Q ss_pred EEeecC
Q psy7538 326 CNLTSN 331 (543)
Q Consensus 326 yni~s~ 331 (543)
..+.++
T Consensus 242 i~vdgg 247 (251)
T PRK12481 242 LAVDGG 247 (251)
T ss_pred EEECCC
Confidence 655443
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.9e-12 Score=128.33 Aligned_cols=224 Identities=15% Similarity=0.147 Sum_probs=145.0
Q ss_pred hhcCCCEEEEEcCcch-hHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEE
Q psy7538 26 KTYENKSIFLSGGSGF-LGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVIS 104 (543)
Q Consensus 26 ~~~~~~~VlITGatGF-iG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~ 104 (543)
..+++++++||||+|+ ||+.+++.|++.|+ +|++..|... ++++.. +.++... ...++..+.
T Consensus 13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~---~V~~~~~~~~------~~~~~~-----~~~~~~~---~~~~~~~~~ 75 (262)
T PRK07831 13 GLLAGKVVLVTAAAGTGIGSATARRALEEGA---RVVISDIHER------RLGETA-----DELAAEL---GLGRVEAVV 75 (262)
T ss_pred cccCCCEEEEECCCcccHHHHHHHHHHHcCC---EEEEEeCCHH------HHHHHH-----HHHHHhc---CCceEEEEE
Confidence 4567899999999984 99999999999987 6778777542 222111 1111111 113678899
Q ss_pred ccCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cC-C
Q psy7538 105 GDITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KN-L 166 (543)
Q Consensus 105 gDl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~-l 166 (543)
+|+++++ +++.+++ .+|+|||+|+.... .+.+...+++|+.|+..+++.+... .+ -
T Consensus 76 ~Dl~~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 149 (262)
T PRK07831 76 CDVTSEA------QVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHG 149 (262)
T ss_pred ccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC
Confidence 9999875 5555443 57999999996421 1345667889999999988887542 12 3
Q ss_pred ceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----c
Q psy7538 167 KCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----L 242 (543)
Q Consensus 167 ~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~ 242 (543)
.++|++||..+..... ....|+.+|+..|.+.+..+. +
T Consensus 150 g~iv~~ss~~~~~~~~--------------------------------------~~~~Y~~sKaal~~~~~~la~e~~~~ 191 (262)
T PRK07831 150 GVIVNNASVLGWRAQH--------------------------------------GQAHYAAAKAGVMALTRCSALEAAEY 191 (262)
T ss_pred cEEEEeCchhhcCCCC--------------------------------------CCcchHHHHHHHHHHHHHHHHHhCcc
Confidence 5888888875532210 016899999999999987664 5
Q ss_pred CCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCC
Q psy7538 243 GMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322 (543)
Q Consensus 243 ~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~ 322 (543)
++++.+++|+.+..+..+ .. .+........... ...-+...+|++++++.++..... -..
T Consensus 192 gI~v~~i~Pg~~~t~~~~-------~~-~~~~~~~~~~~~~---------~~~r~~~p~~va~~~~~l~s~~~~---~it 251 (262)
T PRK07831 192 GVRINAVAPSIAMHPFLA-------KV-TSAELLDELAARE---------AFGRAAEPWEVANVIAFLASDYSS---YLT 251 (262)
T ss_pred CeEEEEEeeCCccCcccc-------cc-cCHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCchhc---CcC
Confidence 899999999988765321 10 1112222222211 112245678999999887765432 124
Q ss_pred CcEEEeec
Q psy7538 323 KSVCNLTS 330 (543)
Q Consensus 323 ~~vyni~s 330 (543)
|+++.+.+
T Consensus 252 G~~i~v~~ 259 (262)
T PRK07831 252 GEVVSVSS 259 (262)
T ss_pred CceEEeCC
Confidence 66665554
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=4.8e-13 Score=132.90 Aligned_cols=228 Identities=12% Similarity=0.085 Sum_probs=146.8
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|+||++++++|++.|+ +|+++.|+.. ++++.. +.++ ....++.++.+|+
T Consensus 8 ~~~k~~lItGa~~~iG~~ia~~l~~~G~---~vv~~~~~~~------~~~~~~-----~~~~-----~~~~~~~~~~~Dl 68 (265)
T PRK07097 8 LKGKIALITGASYGIGFAIAKAYAKAGA---TIVFNDINQE------LVDKGL-----AAYR-----ELGIEAHGYVCDV 68 (265)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---eEEEEeCCHH------HHHHHH-----HHHH-----hcCCceEEEEcCC
Confidence 3689999999999999999999999987 6777777642 222111 1111 1123688899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ +++.+++ .+|+|||+||.... .+.+...+++|+.|+..+.+.+... .+..++|
T Consensus 69 ~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv 142 (265)
T PRK07097 69 TDED------GVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKII 142 (265)
T ss_pred CCHH------HHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 9875 5555443 48999999997532 2345667899999999887776531 2457999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... ....|+.+|+..+.+++.++. .++.+
T Consensus 143 ~isS~~~~~~~~--------------------------------------~~~~Y~~sKaal~~l~~~la~e~~~~gi~v 184 (265)
T PRK07097 143 NICSMMSELGRE--------------------------------------TVSAYAAAKGGLKMLTKNIASEYGEANIQC 184 (265)
T ss_pred EEcCccccCCCC--------------------------------------CCccHHHHHHHHHHHHHHHHHHhhhcCceE
Confidence 999974422110 016899999999999988765 58999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
..++|+.|..+...+...-... .....+...+... .....+...+|++++++.++..... ...+.++
T Consensus 185 ~~v~Pg~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~---~~~g~~~ 251 (265)
T PRK07097 185 NGIGPGYIATPQTAPLRELQAD-GSRHPFDQFIIAK---------TPAARWGDPEDLAGPAVFLASDASN---FVNGHIL 251 (265)
T ss_pred EEEEeccccccchhhhhhcccc-ccchhHHHHHHhc---------CCccCCcCHHHHHHHHHHHhCcccC---CCCCCEE
Confidence 9999999977654331110000 0000011111110 0112345678999999888765322 1246677
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
.+.++
T Consensus 252 ~~~gg 256 (265)
T PRK07097 252 YVDGG 256 (265)
T ss_pred EECCC
Confidence 76665
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.2e-12 Score=127.85 Aligned_cols=225 Identities=10% Similarity=0.037 Sum_probs=139.7
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
.+++|+++||||+|+||++++++|++.|. +|++..|+.. ++++++. +.+.. ....++.++.+|
T Consensus 5 ~l~~k~vlItGas~gIG~~ia~~l~~~G~---~v~~~~~~~~-----~~~~~~~-----~~~~~----~~~~~~~~~~~D 67 (260)
T PRK08416 5 EMKGKTLVISGGTRGIGKAIVYEFAQSGV---NIAFTYNSNV-----EEANKIA-----EDLEQ----KYGIKAKAYPLN 67 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEcCCCH-----HHHHHHH-----HHHHH----hcCCceEEEEcC
Confidence 46889999999999999999999999987 6766666431 2222211 11111 112468899999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CccEEEEcCccCC---------C----cccHHHHHHHHHHHHHHHHHHHHh-c--
Q psy7538 107 ITQLKLGISEIDKKELID-------NVDIVYHVAATIR---------F----DEPIKTAVILNTRGTRDMLELSKQ-M-- 163 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~---------~----~~~~~~~~~~Nv~gt~~ll~~a~~-~-- 163 (543)
+++++ +++.+++ ++|++||+|+... + .+.+...+++|+.+...+.+.+.. +
T Consensus 68 ~~~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 141 (260)
T PRK08416 68 ILEPE------TYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEK 141 (260)
T ss_pred CCCHH------HHHHHHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhc
Confidence 99875 5554443 5899999997431 1 123455788888887766555433 1
Q ss_pred cCCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh--
Q psy7538 164 KNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-- 241 (543)
Q Consensus 164 ~~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-- 241 (543)
.+-.++|++||..+..... ....|+.||+..+.+.+..+.
T Consensus 142 ~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~~~~~la~el 183 (260)
T PRK08416 142 VGGGSIISLSSTGNLVYIE--------------------------------------NYAGHGTSKAAVETMVKYAATEL 183 (260)
T ss_pred cCCEEEEEEeccccccCCC--------------------------------------CcccchhhHHHHHHHHHHHHHHh
Confidence 1346899999975432110 015899999999999987665
Q ss_pred --cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCC
Q psy7538 242 --LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKE 319 (543)
Q Consensus 242 --~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~ 319 (543)
+|+.+..+.|+.|-.+.....+ +............ + ..-+...+|++++++.++.....
T Consensus 184 ~~~gi~v~~v~PG~i~T~~~~~~~-------~~~~~~~~~~~~~-------~--~~r~~~p~~va~~~~~l~~~~~~--- 244 (260)
T PRK08416 184 GEKNIRVNAVSGGPIDTDALKAFT-------NYEEVKAKTEELS-------P--LNRMGQPEDLAGACLFLCSEKAS--- 244 (260)
T ss_pred hhhCeEEEEEeeCcccChhhhhcc-------CCHHHHHHHHhcC-------C--CCCCCCHHHHHHHHHHHcChhhh---
Confidence 4899999999877433211111 1011111111110 1 12256789999999888754322
Q ss_pred CCCCcEEEeecC
Q psy7538 320 SERKSVCNLTSN 331 (543)
Q Consensus 320 ~~~~~vyni~s~ 331 (543)
-..+..+.+.++
T Consensus 245 ~~~G~~i~vdgg 256 (260)
T PRK08416 245 WLTGQTIVVDGG 256 (260)
T ss_pred cccCcEEEEcCC
Confidence 124667766544
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=9.8e-13 Score=147.74 Aligned_cols=196 Identities=13% Similarity=0.154 Sum_probs=138.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||||+||++++++|++.|+ +|+++.|+.. +++++. +.+. ....++.++.+|+
T Consensus 369 ~~~k~vlItGas~giG~~la~~l~~~G~---~V~~~~r~~~------~~~~~~-----~~~~-----~~~~~~~~~~~Dv 429 (657)
T PRK07201 369 LVGKVVLITGASSGIGRATAIKVAEAGA---TVFLVARNGE------ALDELV-----AEIR-----AKGGTAHAYTCDL 429 (657)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHH------HHHHHH-----HHHH-----hcCCcEEEEEecC
Confidence 5689999999999999999999999986 7889998642 222211 1111 1124688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC---------cccHHHHHHHHHHHHHHHHHHHHhc---cCCce
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF---------DEPIKTAVILNTRGTRDMLELSKQM---KNLKC 168 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~---------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~ 168 (543)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+..+
T Consensus 430 ~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~ 503 (657)
T PRK07201 430 TDSA------AVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGH 503 (657)
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCE
Confidence 9875 5665554 58999999996421 1345668999999998887765331 25679
Q ss_pred EEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCC
Q psy7538 169 FTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGM 244 (543)
Q Consensus 169 ~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~l 244 (543)
+|++||..+..... . ...|+.||+..+.+.+..+. .++
T Consensus 504 iv~isS~~~~~~~~----------~----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~~i 545 (657)
T PRK07201 504 VVNVSSIGVQTNAP----------R----------------------------FSAYVASKAALDAFSDVAASETLSDGI 545 (657)
T ss_pred EEEECChhhcCCCC----------C----------------------------cchHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 99999986653211 0 16899999999999877654 589
Q ss_pred cEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhh
Q psy7538 245 PCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWD 313 (543)
Q Consensus 245 p~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~ 313 (543)
.+++++|+.|..+...+. .. . .....++.+++|+.++.++.+
T Consensus 546 ~v~~v~pg~v~T~~~~~~-------------------~~----~----~~~~~~~~~~~a~~i~~~~~~ 587 (657)
T PRK07201 546 TFTTIHMPLVRTPMIAPT-------------------KR----Y----NNVPTISPEEAADMVVRAIVE 587 (657)
T ss_pred cEEEEECCcCcccccCcc-------------------cc----c----cCCCCCCHHHHHHHHHHHHHh
Confidence 999999998865432210 00 0 112357899999999887754
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=3e-12 Score=124.71 Aligned_cols=196 Identities=15% Similarity=0.144 Sum_probs=129.5
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|+||||||+||++++++|+++|+++ .|....|.... .....++.++.+|++++
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~-~v~~~~~~~~~------------------------~~~~~~~~~~~~Dls~~ 55 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDA-TVHATYRHHKP------------------------DFQHDNVQWHALDVTDE 55 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCC-EEEEEccCCcc------------------------ccccCceEEEEecCCCH
Confidence 689999999999999999999997655 56666664321 11124678899999987
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCCCc-------------ccHHHHHHHHHHHHHHHHHHHHh-c--cCCceEEEEec
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIRFD-------------EPIKTAVILNTRGTRDMLELSKQ-M--KNLKCFTYIST 174 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~~~-------------~~~~~~~~~Nv~gt~~ll~~a~~-~--~~l~~~V~vST 174 (543)
+ +.+.+.+.+.++|+|||+||..... +.+...+++|+.|+..+.+.+.. + .+..+++++||
T Consensus 56 ~---~~~~~~~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss 132 (235)
T PRK09009 56 A---EIKQLSEQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISA 132 (235)
T ss_pred H---HHHHHHHhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEee
Confidence 5 1122333345799999999976311 22445789999999888887755 2 13458899987
Q ss_pred CccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh------cCCcEEE
Q psy7538 175 AYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME------LGMPCMI 248 (543)
Q Consensus 175 ~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~------~~lp~~I 248 (543)
..+..... ..+ + ...|+.+|+..+.+.+..+. .++.+..
T Consensus 133 ~~~~~~~~-----~~~-~-----------------------------~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~ 177 (235)
T PRK09009 133 KVGSISDN-----RLG-G-----------------------------WYSYRASKAALNMFLKTLSIEWQRSLKHGVVLA 177 (235)
T ss_pred cccccccC-----CCC-C-----------------------------cchhhhhHHHHHHHHHHHHHHhhcccCCeEEEE
Confidence 54321100 000 0 04899999999998877653 2677888
Q ss_pred EecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhc
Q psy7538 249 LRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFL 315 (543)
Q Consensus 249 lRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~ 315 (543)
+.|+.|-.+...+ ... ......++..+|+|++++.++....
T Consensus 178 v~PG~v~t~~~~~-----------------~~~---------~~~~~~~~~~~~~a~~~~~l~~~~~ 218 (235)
T PRK09009 178 LHPGTTDTALSKP-----------------FQQ---------NVPKGKLFTPEYVAQCLLGIIANAT 218 (235)
T ss_pred EcccceecCCCcc-----------------hhh---------ccccCCCCCHHHHHHHHHHHHHcCC
Confidence 8888775442210 000 0111235788999999998887653
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.9e-13 Score=130.23 Aligned_cols=162 Identities=13% Similarity=0.167 Sum_probs=115.0
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|+||||+|++|++++++|++.|+ +|+++.|+.... +.+++ ..++.++.+|++++
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~---~V~~~~r~~~~~---~~~~~------------------~~~~~~~~~D~~d~ 57 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW---QVTATVRGPQQD---TALQA------------------LPGVHIEKLDMNDP 57 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC---EEEEEeCCCcch---HHHHh------------------ccccceEEcCCCCH
Confidence 6899999999999999999999986 889999986432 11111 12466778999987
Q ss_pred CCCCCHHHHHHHhc-----CccEEEEcCccCCC---------cccHHHHHHHHHHHHHHHHHHHHhc--cCCceEEEEec
Q psy7538 111 KLGISEIDKKELID-----NVDIVYHVAATIRF---------DEPIKTAVILNTRGTRDMLELSKQM--KNLKCFTYIST 174 (543)
Q Consensus 111 ~lgls~~~~~~l~~-----~vd~ViH~AA~v~~---------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~l~~~V~vST 174 (543)
+ +++.+++ ++|+|||+|+.... .+.+...+++|+.++.++++.+... ++...++++||
T Consensus 58 ~------~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss 131 (225)
T PRK08177 58 A------SLDQLLQRLQGQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSS 131 (225)
T ss_pred H------HHHHHHHHhhcCCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEcc
Confidence 5 4555444 58999999987532 1334557888999999998888643 12257888888
Q ss_pred CccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEEEe
Q psy7538 175 AYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMILR 250 (543)
Q Consensus 175 ~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~IlR 250 (543)
.++.....+. ..+ ..|+.+|+..|.+++.++. .++.+..++
T Consensus 132 ~~g~~~~~~~----------------------------------~~~-~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~ 176 (225)
T PRK08177 132 QLGSVELPDG----------------------------------GEM-PLYKASKAALNSMTRSFVAELGEPTLTVLSMH 176 (225)
T ss_pred CccccccCCC----------------------------------CCc-cchHHHHHHHHHHHHHHHHHhhcCCeEEEEEc
Confidence 7554221100 001 4799999999999987654 468899999
Q ss_pred cCeeeec
Q psy7538 251 PSIVVPI 257 (543)
Q Consensus 251 ps~V~G~ 257 (543)
|+.|-.+
T Consensus 177 PG~i~t~ 183 (225)
T PRK08177 177 PGWVKTD 183 (225)
T ss_pred CCceecC
Confidence 9877443
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.49 E-value=8.6e-13 Score=121.66 Aligned_cols=164 Identities=17% Similarity=0.248 Sum_probs=117.0
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
++++||||||++|.+++++|++.|. ..|+++.|+.......... .+.++ ....++.++.+|++++
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~--~~v~~~~r~~~~~~~~~~~--------~~~~~-----~~~~~~~~~~~D~~~~ 65 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGA--RHLVLLSRSGPDAPGAAEL--------LAELE-----ALGAEVTVVACDVADR 65 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhC--CeEEEEeCCCCCCccHHHH--------HHHHH-----hcCCeEEEEECCCCCH
Confidence 5799999999999999999999875 2677788865432211100 11111 1124678899999886
Q ss_pred CCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCc
Q psy7538 111 KLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAY 176 (543)
Q Consensus 111 ~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y 176 (543)
+ ++..+++ .+|.|||+|+.... .+.++..+++|+.|+.++++++++. +.+++|++||..
T Consensus 66 ~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~ii~~ss~~ 138 (180)
T smart00822 66 A------ALAAALAAIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDL-PLDFFVLFSSVA 138 (180)
T ss_pred H------HHHHHHHHHHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccC-CcceEEEEccHH
Confidence 4 4554433 47999999986432 1345678999999999999999775 778999999975
Q ss_pred cccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCee
Q psy7538 177 CHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIV 254 (543)
Q Consensus 177 ~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V 254 (543)
+..... ....|+.+|...+.++......+++++.+.|+.+
T Consensus 139 ~~~~~~--------------------------------------~~~~y~~sk~~~~~~~~~~~~~~~~~~~~~~g~~ 178 (180)
T smart00822 139 GVLGNP--------------------------------------GQANYAAANAFLDALAAHRRARGLPATSINWGAW 178 (180)
T ss_pred HhcCCC--------------------------------------CchhhHHHHHHHHHHHHHHHhcCCceEEEeeccc
Confidence 532210 0168999999999998665556899999988754
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.49 E-value=6.6e-13 Score=131.71 Aligned_cols=164 Identities=15% Similarity=0.196 Sum_probs=118.0
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||||+||++++++|++.|+ +|+++.|+. ++++++. .....++..+.+|+
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~---~V~~~~r~~------~~~~~l~-------------~~~~~~~~~~~~D~ 60 (262)
T TIGR03325 3 LKGEVVLVTGGASGLGRAIVDRFVAEGA---RVAVLDKSA------AGLQELE-------------AAHGDAVVGVEGDV 60 (262)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHH-------------hhcCCceEEEEecc
Confidence 4689999999999999999999999987 788888864 2232221 11123578899999
Q ss_pred CCCCCCCCHHHHHHHh-------cCccEEEEcCccCC----C---c-----ccHHHHHHHHHHHHHHHHHHHHhc--cCC
Q psy7538 108 TQLKLGISEIDKKELI-------DNVDIVYHVAATIR----F---D-----EPIKTAVILNTRGTRDMLELSKQM--KNL 166 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~----~---~-----~~~~~~~~~Nv~gt~~ll~~a~~~--~~l 166 (543)
++++ ++..++ .++|++||+||... + . +.++..+++|+.|+..+++++... +.-
T Consensus 61 ~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~ 134 (262)
T TIGR03325 61 RSLD------DHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASR 134 (262)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcC
Confidence 9865 444433 36899999998632 1 1 135678999999999999998653 112
Q ss_pred ceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh---cC
Q psy7538 167 KCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME---LG 243 (543)
Q Consensus 167 ~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~---~~ 243 (543)
.++|++||..+.... + ....|+.+|+..+.+++..+. .+
T Consensus 135 g~iv~~sS~~~~~~~----------~----------------------------~~~~Y~~sKaa~~~l~~~la~e~~~~ 176 (262)
T TIGR03325 135 GSVIFTISNAGFYPN----------G----------------------------GGPLYTAAKHAVVGLVKELAFELAPY 176 (262)
T ss_pred CCEEEEeccceecCC----------C----------------------------CCchhHHHHHHHHHHHHHHHHhhccC
Confidence 578999887543211 0 015799999999999988766 24
Q ss_pred CcEEEEecCeeeec
Q psy7538 244 MPCMILRPSIVVPI 257 (543)
Q Consensus 244 lp~~IlRps~V~G~ 257 (543)
+.+..+.|+.|..+
T Consensus 177 irvn~i~PG~i~t~ 190 (262)
T TIGR03325 177 VRVNGVAPGGMSSD 190 (262)
T ss_pred eEEEEEecCCCcCC
Confidence 88899999988654
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=9.5e-13 Score=128.61 Aligned_cols=171 Identities=15% Similarity=0.202 Sum_probs=118.0
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||+|+||++++++|++.|+ +|.++.|+.. +++++ .+.++.. ....+..+.+|+
T Consensus 4 l~~k~vlItG~sggiG~~la~~l~~~g~---~V~~~~r~~~------~~~~~-----~~~l~~~----~~~~~~~~~~D~ 65 (239)
T PRK08703 4 LSDKTILVTGASQGLGEQVAKAYAAAGA---TVILVARHQK------KLEKV-----YDAIVEA----GHPEPFAIRFDL 65 (239)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHcCC---EEEEEeCChH------HHHHH-----HHHHHHc----CCCCcceEEeee
Confidence 5689999999999999999999999986 7888888753 22221 1222211 112456778898
Q ss_pred CCCCCCCCHHHHHHH-------h-cCccEEEEcCccCC----Cc----ccHHHHHHHHHHHHHHHHHHHHhc---cCCce
Q psy7538 108 TQLKLGISEIDKKEL-------I-DNVDIVYHVAATIR----FD----EPIKTAVILNTRGTRDMLELSKQM---KNLKC 168 (543)
Q Consensus 108 ~~~~lgls~~~~~~l-------~-~~vd~ViH~AA~v~----~~----~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~ 168 (543)
++.+ .+++..+ + .++|+|||+||... +. +.+...+++|+.|+.++++++... .+-.+
T Consensus 66 ~~~~----~~~~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~ 141 (239)
T PRK08703 66 MSAE----EKEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDAS 141 (239)
T ss_pred cccc----hHHHHHHHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCE
Confidence 7632 1223322 2 46899999999642 11 334567899999999888887542 13468
Q ss_pred EEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----c-C
Q psy7538 169 FTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----L-G 243 (543)
Q Consensus 169 ~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~-~ 243 (543)
+|++||..+.... | ....|+.+|+..|.+++..+. . +
T Consensus 142 iv~~ss~~~~~~~----------~----------------------------~~~~Y~~sKaa~~~~~~~la~e~~~~~~ 183 (239)
T PRK08703 142 VIFVGESHGETPK----------A----------------------------YWGGFGASKAALNYLCKVAADEWERFGN 183 (239)
T ss_pred EEEEeccccccCC----------C----------------------------CccchHHhHHHHHHHHHHHHHHhccCCC
Confidence 9999986543211 0 015799999999999877655 2 5
Q ss_pred CcEEEEecCeeeecC
Q psy7538 244 MPCMILRPSIVVPIY 258 (543)
Q Consensus 244 lp~~IlRps~V~G~~ 258 (543)
+.+.+++||.|.++.
T Consensus 184 i~v~~v~pG~v~t~~ 198 (239)
T PRK08703 184 LRANVLVPGPINSPQ 198 (239)
T ss_pred eEEEEEecCcccCcc
Confidence 899999999998764
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.4e-12 Score=128.29 Aligned_cols=161 Identities=14% Similarity=0.149 Sum_probs=112.3
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|+||||||+||+.++++|++.|+ +|.++.|... ++++++. .....++.++.+|++++
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~---~V~~~~r~~~-----~~~~~~~-------------~~~~~~~~~~~~D~~~~ 60 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGT---HVISISRTEN-----KELTKLA-------------EQYNSNLTFHSLDLQDV 60 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCC---EEEEEeCCch-----HHHHHHH-------------hccCCceEEEEecCCCH
Confidence 6899999999999999999999986 7888888652 2232221 11234688899999987
Q ss_pred CCCCCHHHHHHHhcCc-----------cEEEEcCccCCC--------cccHHHHHHHHHHHHHHHHHHHHh----ccCCc
Q psy7538 111 KLGISEIDKKELIDNV-----------DIVYHVAATIRF--------DEPIKTAVILNTRGTRDMLELSKQ----MKNLK 167 (543)
Q Consensus 111 ~lgls~~~~~~l~~~v-----------d~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~~a~~----~~~l~ 167 (543)
+ +++.+++++ .++||+||.... .+.+...+++|+.|+..+++.+.. .++.+
T Consensus 61 ~------~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 134 (251)
T PRK06924 61 H------ELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDK 134 (251)
T ss_pred H------HHHHHHHHHHHhcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCc
Confidence 6 565555422 278999986532 133556788899987666655533 22346
Q ss_pred eEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh------
Q psy7538 168 CFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME------ 241 (543)
Q Consensus 168 ~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~------ 241 (543)
++|++||..+..... + ...|+.+|+..|.+++..+.
T Consensus 135 ~iv~~sS~~~~~~~~---------~-----------------------------~~~Y~~sKaa~~~~~~~la~e~~~~~ 176 (251)
T PRK06924 135 RVINISSGAAKNPYF---------G-----------------------------WSAYCSSKAGLDMFTQTVATEQEEEE 176 (251)
T ss_pred eEEEecchhhcCCCC---------C-----------------------------cHHHhHHHHHHHHHHHHHHHHhhhcC
Confidence 899999975532110 0 16899999999999876643
Q ss_pred cCCcEEEEecCeeee
Q psy7538 242 LGMPCMILRPSIVVP 256 (543)
Q Consensus 242 ~~lp~~IlRps~V~G 256 (543)
.++.+..++|+.|-.
T Consensus 177 ~~i~v~~v~Pg~v~t 191 (251)
T PRK06924 177 YPVKIVAFSPGVMDT 191 (251)
T ss_pred CCeEEEEecCCcccc
Confidence 368889999987743
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=7e-12 Score=122.22 Aligned_cols=209 Identities=11% Similarity=0.056 Sum_probs=136.5
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+|+++||||+|+||++++++|++.|+ +|.++.|+... ..+.+++ .++.++.+|+++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~--~~~~~~~-------------------~~~~~~~~D~~~ 57 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ---PVIVSYRTHYP--AIDGLRQ-------------------AGAQCIQADFST 57 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC---eEEEEeCCchh--HHHHHHH-------------------cCCEEEEcCCCC
Confidence 57999999999999999999999987 78888887532 1111110 135688999998
Q ss_pred CCCCCCHHHHHHHh-------cCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cC--CceEE
Q psy7538 110 LKLGISEIDKKELI-------DNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KN--LKCFT 170 (543)
Q Consensus 110 ~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~--l~~~V 170 (543)
++ +++.++ .++|++||+|+.... .+.++..+++|+.++..+.+.+... .+ -.++|
T Consensus 58 ~~------~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv 131 (236)
T PRK06483 58 NA------GIMAFIDELKQHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDII 131 (236)
T ss_pred HH------HHHHHHHHHHhhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEE
Confidence 75 444433 348999999986421 2345678999999998877766542 12 35899
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh---cCCcEE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME---LGMPCM 247 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~---~~lp~~ 247 (543)
++||..+..... ....|+.||+..|.+++.++. .++.+.
T Consensus 132 ~~ss~~~~~~~~--------------------------------------~~~~Y~asKaal~~l~~~~a~e~~~~irvn 173 (236)
T PRK06483 132 HITDYVVEKGSD--------------------------------------KHIAYAASKAALDNMTLSFAAKLAPEVKVN 173 (236)
T ss_pred EEcchhhccCCC--------------------------------------CCccHHHHHHHHHHHHHHHHHHHCCCcEEE
Confidence 998864321110 016899999999999988766 358999
Q ss_pred EEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEE
Q psy7538 248 ILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCN 327 (543)
Q Consensus 248 IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyn 327 (543)
.++|+.|.-... . ............+. .-....+|+++++..++.... ..+.++.
T Consensus 174 ~v~Pg~~~~~~~----------~-~~~~~~~~~~~~~~---------~~~~~~~~va~~~~~l~~~~~-----~~G~~i~ 228 (236)
T PRK06483 174 SIAPALILFNEG----------D-DAAYRQKALAKSLL---------KIEPGEEEIIDLVDYLLTSCY-----VTGRSLP 228 (236)
T ss_pred EEccCceecCCC----------C-CHHHHHHHhccCcc---------ccCCCHHHHHHHHHHHhcCCC-----cCCcEEE
Confidence 999998732210 0 01111111111110 012357999999988775322 2577777
Q ss_pred eecC
Q psy7538 328 LTSN 331 (543)
Q Consensus 328 i~s~ 331 (543)
+.++
T Consensus 229 vdgg 232 (236)
T PRK06483 229 VDGG 232 (236)
T ss_pred eCcc
Confidence 7655
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.3e-12 Score=127.36 Aligned_cols=214 Identities=14% Similarity=0.113 Sum_probs=140.0
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++++|+||||+|+||+++++.|++.|. +|+++.|+... .+++.+ .+ . ...++.++.+|+
T Consensus 3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~---~V~~~~r~~~~---~~~~~~--------~~-----~-~~~~~~~~~~Dl 62 (238)
T PRK05786 3 LKGKKVAIIGVSEGLGYAVAYFALKEGA---QVCINSRNENK---LKRMKK--------TL-----S-KYGNIHYVVGDV 62 (238)
T ss_pred cCCcEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHH--------HH-----H-hcCCeEEEECCC
Confidence 3578999999999999999999999986 78899986421 112211 01 1 113678899999
Q ss_pred CCCCCCCCHHHHHHHh-------cCccEEEEcCccCCC-----cccHHHHHHHHHHHHHHHHHHHHhc-cCCceEEEEec
Q psy7538 108 TQLKLGISEIDKKELI-------DNVDIVYHVAATIRF-----DEPIKTAVILNTRGTRDMLELSKQM-KNLKCFTYIST 174 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~-----~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~vST 174 (543)
++++ ++..++ ..+|.++|+|+.... .+.++..+++|+.+..++++.+..+ ..-.++|++||
T Consensus 63 ~~~~------~~~~~~~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss 136 (238)
T PRK05786 63 SSTE------SARNVIEKAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSS 136 (238)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEec
Confidence 9876 444433 347999999985432 1334556899999998888887653 12257999998
Q ss_pred CccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEEEe
Q psy7538 175 AYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMILR 250 (543)
Q Consensus 175 ~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~IlR 250 (543)
..+.... . + ....|+.+|+..+.+++.... .+++++++|
T Consensus 137 ~~~~~~~--~-------~----------------------------~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~ 179 (238)
T PRK05786 137 MSGIYKA--S-------P----------------------------DQLSYAVAKAGLAKAVEILASELLGRGIRVNGIA 179 (238)
T ss_pred chhcccC--C-------C----------------------------CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEe
Confidence 7442100 0 0 015799999999888776554 489999999
Q ss_pred cCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeec
Q psy7538 251 PSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTS 330 (543)
Q Consensus 251 ps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s 330 (543)
|+.|+++.. | ..... .. . ......++.+|++++++.++..... ...+..+.+.+
T Consensus 180 pg~v~~~~~-~-----------~~~~~----~~-~------~~~~~~~~~~~va~~~~~~~~~~~~---~~~g~~~~~~~ 233 (238)
T PRK05786 180 PTTISGDFE-P-----------ERNWK----KL-R------KLGDDMAPPEDFAKVIIWLLTDEAD---WVDGVVIPVDG 233 (238)
T ss_pred cCccCCCCC-c-----------hhhhh----hh-c------cccCCCCCHHHHHHHHHHHhccccc---CccCCEEEECC
Confidence 999987632 1 00000 00 0 1112467889999999988865332 12355666543
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.6e-12 Score=132.57 Aligned_cols=178 Identities=14% Similarity=0.108 Sum_probs=120.9
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||||+||++++++|++.|. +|++..|+... .++.+++ +.... ...++.++.+|+
T Consensus 12 l~gk~~lITGas~GIG~~~a~~La~~G~---~Vil~~R~~~~--~~~~~~~---------l~~~~---~~~~v~~~~~Dl 74 (313)
T PRK05854 12 LSGKRAVVTGASDGLGLGLARRLAAAGA---EVILPVRNRAK--GEAAVAA---------IRTAV---PDAKLSLRALDL 74 (313)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCHHH--HHHHHHH---------HHHhC---CCCceEEEEecC
Confidence 5789999999999999999999999986 78888887421 1112222 21111 123688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC------cccHHHHHHHHHHHHHHHHHHHHhc--cCCceEEEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF------DEPIKTAVILNTRGTRDMLELSKQM--KNLKCFTYI 172 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~l~~~V~v 172 (543)
++.+ +++.+++ .+|++||+||.... .+.++..+++|+.|...+.+.+... .+-.++|++
T Consensus 75 ~d~~------sv~~~~~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~v 148 (313)
T PRK05854 75 SSLA------SVAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQ 148 (313)
T ss_pred CCHH------HHHHHHHHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 9875 5554443 48999999997532 1446678999999988777776531 123589999
Q ss_pred ecCccccCCC---cccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh------cC
Q psy7538 173 STAYCHPSEK---VLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME------LG 243 (543)
Q Consensus 173 ST~y~~~~~~---~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~------~~ 243 (543)
||........ .+.+. .+.. ....|+.||+..+.+..+.+. .+
T Consensus 149 sS~~~~~~~~~~~~~~~~---~~~~--------------------------~~~~Y~~SK~a~~~~~~~la~~~~~~~~g 199 (313)
T PRK05854 149 SSIAARRGAINWDDLNWE---RSYA--------------------------GMRAYSQSKIAVGLFALELDRRSRAAGWG 199 (313)
T ss_pred echhhcCCCcCccccccc---ccCc--------------------------chhhhHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 9985432111 11110 0000 015899999999998877642 36
Q ss_pred CcEEEEecCeeeec
Q psy7538 244 MPCMILRPSIVVPI 257 (543)
Q Consensus 244 lp~~IlRps~V~G~ 257 (543)
+.+..+.||.|-..
T Consensus 200 I~v~~v~PG~v~T~ 213 (313)
T PRK05854 200 ITSNLAHPGVAPTN 213 (313)
T ss_pred eEEEEEecceeccC
Confidence 89999999988654
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.8e-12 Score=128.73 Aligned_cols=167 Identities=16% Similarity=0.133 Sum_probs=118.8
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||+|.||++++++|++.|+ +|++..|+.. ++++.. +.++.. ...++.++.+|+
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~---~V~~~~r~~~------~~~~~~-----~~~~~~----~~~~~~~~~~Dv 67 (263)
T PRK08339 6 LSGKLAFTTASSKGIGFGVARVLARAGA---DVILLSRNEE------NLKKAR-----EKIKSE----SNVDVSYIVADL 67 (263)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHH-----HHHHhh----cCCceEEEEecC
Confidence 5789999999999999999999999987 7888888642 222111 111111 124688999999
Q ss_pred CCCCCCCCHHHHHHHhc------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHH----hccCCceEE
Q psy7538 108 TQLKLGISEIDKKELID------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSK----QMKNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~----~~~~l~~~V 170 (543)
++++ +++.+++ .+|++||+|+.... .+.++..+++|+.|...+.+.+. +. +..++|
T Consensus 68 ~~~~------~i~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~-~~g~Ii 140 (263)
T PRK08339 68 TKRE------DLERTVKELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERK-GFGRII 140 (263)
T ss_pred CCHH------HHHHHHHHHHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEE
Confidence 9875 5555554 58999999986432 24566789999888776665543 32 457899
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... ....|+.+|+..+.+.+..+. +|+.+
T Consensus 141 ~isS~~~~~~~~--------------------------------------~~~~y~asKaal~~l~~~la~el~~~gIrV 182 (263)
T PRK08339 141 YSTSVAIKEPIP--------------------------------------NIALSNVVRISMAGLVRTLAKELGPKGITV 182 (263)
T ss_pred EEcCccccCCCC--------------------------------------cchhhHHHHHHHHHHHHHHHHHhcccCeEE
Confidence 999986532111 015799999998888877654 58999
Q ss_pred EEEecCeeeec
Q psy7538 247 MILRPSIVVPI 257 (543)
Q Consensus 247 ~IlRps~V~G~ 257 (543)
..+.|+.|-.+
T Consensus 183 n~v~PG~v~T~ 193 (263)
T PRK08339 183 NGIMPGIIRTD 193 (263)
T ss_pred EEEEeCcCccH
Confidence 99999988543
|
|
| >KOG4039|consensus | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.3e-13 Score=119.84 Aligned_cols=164 Identities=21% Similarity=0.242 Sum_probs=130.9
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|++||.||||-.|+.|++.++++ +...+||++.|.+-.. +...+++.....|.
T Consensus 16 mq~~s~fvlGAtG~~G~~llk~~~E~-~~FSKV~~i~RR~~~d-----------------------~at~k~v~q~~vDf 71 (238)
T KOG4039|consen 16 MQNMSGFVLGATGLCGGGLLKHAQEA-PQFSKVYAILRRELPD-----------------------PATDKVVAQVEVDF 71 (238)
T ss_pred hhccceEEEeccccccHHHHHHHHhc-ccceeEEEEEeccCCC-----------------------ccccceeeeEEech
Confidence 46899999999999999999999998 6888999999985221 44556778888888
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCccccc
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEER 187 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i~E~ 187 (543)
...+ ++.....++|+.|.|-|+.+-..-.+.++++.-.-...+.++|++- +++.||.+||+.+.....
T Consensus 72 ~Kl~------~~a~~~qg~dV~FcaLgTTRgkaGadgfykvDhDyvl~~A~~AKe~-Gck~fvLvSS~GAd~sSr----- 139 (238)
T KOG4039|consen 72 SKLS------QLATNEQGPDVLFCALGTTRGKAGADGFYKVDHDYVLQLAQAAKEK-GCKTFVLVSSAGADPSSR----- 139 (238)
T ss_pred HHHH------HHHhhhcCCceEEEeecccccccccCceEeechHHHHHHHHHHHhC-CCeEEEEEeccCCCcccc-----
Confidence 8754 6777778999999999988765545556666666778888999986 999999999997765432
Q ss_pred ccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCCC
Q psy7538 188 TYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPG 264 (543)
Q Consensus 188 ~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~g 264 (543)
-.|-.+|-..|+-+.+..- -.++|+||+.+.|...+..+|
T Consensus 140 -----------------------------------FlY~k~KGEvE~~v~eL~F--~~~~i~RPG~ll~~R~esr~g 179 (238)
T KOG4039|consen 140 -----------------------------------FLYMKMKGEVERDVIELDF--KHIIILRPGPLLGERTESRQG 179 (238)
T ss_pred -----------------------------------eeeeeccchhhhhhhhccc--cEEEEecCcceeccccccccc
Confidence 3688888888888877621 268999999999998876443
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.2e-12 Score=127.86 Aligned_cols=223 Identities=14% Similarity=0.085 Sum_probs=138.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|.||++++++|++.|. +|.+..|+... ..+.+. +.++ ....++..+.+|+
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~---~vvi~~~~~~~--~~~~~~--------~~l~-----~~~~~~~~~~~Dl 66 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKEKA---KVVINYRSDEE--EANDVA--------EEIK-----KAGGEAIAVKGDV 66 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCCHH--HHHHHH--------HHHH-----HcCCeEEEEEecC
Confidence 5789999999999999999999999986 67777774321 111111 1111 1124677899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHH----HHHhccCCceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLE----LSKQMKNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~----~a~~~~~l~~~ 169 (543)
++++ ++..+++ .+|++||+|+.... .+.++..+++|+.++..+++ .+++.+.-.++
T Consensus 67 ~~~~------~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~i 140 (261)
T PRK08936 67 TVES------DVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNI 140 (261)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEE
Confidence 9875 5555443 58999999996432 13355678999888765544 44443223689
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+.... | ....|+.+|+..+.+.+..+. .++.
T Consensus 141 v~~sS~~~~~~~----------~----------------------------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~ 182 (261)
T PRK08936 141 INMSSVHEQIPW----------P----------------------------LFVHYAASKGGVKLMTETLAMEYAPKGIR 182 (261)
T ss_pred EEEccccccCCC----------C----------------------------CCcccHHHHHHHHHHHHHHHHHHhhcCeE
Confidence 999997443211 0 016899999877777666543 5899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
+..++|+.|-.+.... .+..+. ......... ....+...+|+++++..++..... ...+..
T Consensus 183 v~~v~pg~v~t~~~~~------~~~~~~-~~~~~~~~~---------~~~~~~~~~~va~~~~~l~s~~~~---~~~G~~ 243 (261)
T PRK08936 183 VNNIGPGAINTPINAE------KFADPK-QRADVESMI---------PMGYIGKPEEIAAVAAWLASSEAS---YVTGIT 243 (261)
T ss_pred EEEEEECcCCCCcccc------ccCCHH-HHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCcccC---CccCcE
Confidence 9999999886654321 111111 111111111 112356678999998887765432 123555
Q ss_pred EEeecC
Q psy7538 326 CNLTSN 331 (543)
Q Consensus 326 yni~s~ 331 (543)
+.+..+
T Consensus 244 i~~d~g 249 (261)
T PRK08936 244 LFADGG 249 (261)
T ss_pred EEECCC
Confidence 555443
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.2e-12 Score=129.93 Aligned_cols=164 Identities=17% Similarity=0.227 Sum_probs=117.7
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|+||++++++|++.|+ +|+++.|+.. +++++. . ....++.++.+|+
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~---~V~~~~r~~~------~~~~~~---------~----~~~~~~~~~~~D~ 61 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAEGA---RVAVLERSAE------KLASLR---------Q----RFGDHVLVVEGDV 61 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHH---------H----HhCCcceEEEccC
Confidence 5789999999999999999999999987 7888888642 222211 0 1123578899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-----c---c----cHHHHHHHHHHHHHHHHHHHHhc--cCC
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-----D---E----PIKTAVILNTRGTRDMLELSKQM--KNL 166 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-----~---~----~~~~~~~~Nv~gt~~ll~~a~~~--~~l 166 (543)
++++ +++.+++ .+|++||+|+.... + + .++..+++|+.|+..+++.+... +.-
T Consensus 62 ~~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 135 (263)
T PRK06200 62 TSYA------DNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASG 135 (263)
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcC
Confidence 9875 4544433 58999999996431 1 1 14556789999999988888642 122
Q ss_pred ceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh---cC
Q psy7538 167 KCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME---LG 243 (543)
Q Consensus 167 ~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~---~~ 243 (543)
.++|++||..+...... ...|+.||+..+.+++..+. .+
T Consensus 136 g~iv~~sS~~~~~~~~~--------------------------------------~~~Y~~sK~a~~~~~~~la~el~~~ 177 (263)
T PRK06200 136 GSMIFTLSNSSFYPGGG--------------------------------------GPLYTASKHAVVGLVRQLAYELAPK 177 (263)
T ss_pred CEEEEECChhhcCCCCC--------------------------------------CchhHHHHHHHHHHHHHHHHHHhcC
Confidence 57999999855422110 05799999999999887665 35
Q ss_pred CcEEEEecCeeeec
Q psy7538 244 MPCMILRPSIVVPI 257 (543)
Q Consensus 244 lp~~IlRps~V~G~ 257 (543)
+.+..+.|+.|..+
T Consensus 178 Irvn~i~PG~i~t~ 191 (263)
T PRK06200 178 IRVNGVAPGGTVTD 191 (263)
T ss_pred cEEEEEeCCccccC
Confidence 88999999988554
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.3e-12 Score=126.17 Aligned_cols=161 Identities=14% Similarity=0.142 Sum_probs=114.4
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
++++||||+|+||++++++|++.|. +|.++.|.... .+++.. .+++++.+|+++.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~---~v~~~~r~~~~---~~~~~~-------------------~~~~~~~~D~~~~ 56 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW---RVIATARDAAA---LAALQA-------------------LGAEALALDVADP 56 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC---EEEEEECCHHH---HHHHHh-------------------ccceEEEecCCCH
Confidence 6899999999999999999999886 78888886421 112210 1356789999997
Q ss_pred CCCCCHHHHHHHh---c--CccEEEEcCccCCC---------cccHHHHHHHHHHHHHHHHHHHHhc--cCCceEEEEec
Q psy7538 111 KLGISEIDKKELI---D--NVDIVYHVAATIRF---------DEPIKTAVILNTRGTRDMLELSKQM--KNLKCFTYIST 174 (543)
Q Consensus 111 ~lgls~~~~~~l~---~--~vd~ViH~AA~v~~---------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~l~~~V~vST 174 (543)
+ +++.++ . .+|+|||+|+.... .+.++..+++|+.|+.++++++... ..-.++|++||
T Consensus 57 ~------~v~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS 130 (222)
T PRK06953 57 A------SVAGLAWKLDGEALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSS 130 (222)
T ss_pred H------HHHHHHHHhcCCCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcC
Confidence 6 455542 2 48999999987521 2345678999999999999998752 12247899988
Q ss_pred CccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh--cCCcEEEEecC
Q psy7538 175 AYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME--LGMPCMILRPS 252 (543)
Q Consensus 175 ~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~--~~lp~~IlRps 252 (543)
..+.....+ .. ....|+.+|+..+.+++.... .++++..++|+
T Consensus 131 ~~~~~~~~~---------~~--------------------------~~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg 175 (222)
T PRK06953 131 RMGSIGDAT---------GT--------------------------TGWLYRASKAALNDALRAASLQARHATCIALHPG 175 (222)
T ss_pred ccccccccc---------CC--------------------------CccccHHhHHHHHHHHHHHhhhccCcEEEEECCC
Confidence 743221100 00 003699999999999988765 47889999998
Q ss_pred eeeec
Q psy7538 253 IVVPI 257 (543)
Q Consensus 253 ~V~G~ 257 (543)
.|..+
T Consensus 176 ~i~t~ 180 (222)
T PRK06953 176 WVRTD 180 (222)
T ss_pred eeecC
Confidence 77443
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.45 E-value=4.8e-12 Score=138.20 Aligned_cols=221 Identities=10% Similarity=0.132 Sum_probs=148.1
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
...||+++||||+|.||.+++++|++.|. +|+++.|+. ++++++. ++ ...++..+.+|
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~---~V~~~~r~~------~~~~~~~---------~~----~~~~~~~~~~D 323 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAAAGD---RLLIIDRDA------EGAKKLA---------EA----LGDEHLSVQAD 323 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHH---------HH----hCCceeEEEcc
Confidence 45899999999999999999999999986 788888863 2332221 11 11356678999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC--------cccHHHHHHHHHHHHHHHHHHHHhc-cCCceEE
Q psy7538 107 ITQLKLGISEIDKKELID-------NVDIVYHVAATIRF--------DEPIKTAVILNTRGTRDMLELSKQM-KNLKCFT 170 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V 170 (543)
+++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++.+.+... ++-.++|
T Consensus 324 ~~~~~------~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv 397 (520)
T PRK06484 324 ITDEA------AVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIV 397 (520)
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEE
Confidence 99875 5555443 48999999996521 1345668999999999999988653 2346899
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... + ...|+.+|+..+.+++..+. +|+++
T Consensus 398 ~isS~~~~~~~~---------~-----------------------------~~~Y~asKaal~~l~~~la~e~~~~gI~v 439 (520)
T PRK06484 398 NLGSIASLLALP---------P-----------------------------RNAYCASKAAVTMLSRSLACEWAPAGIRV 439 (520)
T ss_pred EECchhhcCCCC---------C-----------------------------CchhHHHHHHHHHHHHHHHHHhhhhCeEE
Confidence 999986643211 0 16899999999999887654 57999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
..+.|+.|..+...... + ... .......+.. ....+..++|+|++++.++..... -..++++
T Consensus 440 n~v~PG~v~t~~~~~~~---~--~~~-~~~~~~~~~~---------~~~~~~~~~dia~~~~~l~s~~~~---~~~G~~i 501 (520)
T PRK06484 440 NTVAPGYIETPAVLALK---A--SGR-ADFDSIRRRI---------PLGRLGDPEEVAEAIAFLASPAAS---YVNGATL 501 (520)
T ss_pred EEEEeCCccCchhhhhc---c--ccH-HHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCcccc---CccCcEE
Confidence 99999988655321100 0 000 0111111111 011246789999999888764322 1357788
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
.+.++
T Consensus 502 ~vdgg 506 (520)
T PRK06484 502 TVDGG 506 (520)
T ss_pred EECCC
Confidence 87665
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.3e-11 Score=120.31 Aligned_cols=223 Identities=16% Similarity=0.101 Sum_probs=137.4
Q ss_pred cCCCEEEEEcCcc--hhHHHHHHHHHhhCCCcCEEEEEecCCCCCC-----HHHHHHHHhcCchhHHHHhhcCcCCCCce
Q psy7538 28 YENKSIFLSGGSG--FLGKVLIEKILRLEPNVKKIYLLMRTKKGKT-----PNQRVEELFESPVFDALKTLRGKSILQKI 100 (543)
Q Consensus 28 ~~~~~VlITGatG--FiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~-----~~~rl~~~~~~~~f~~l~~~~~~~~~~~v 100 (543)
++||+|+|||||| .||++++++|++.|. +|++..|...... ..+...++ -+.++ ....++
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~---~vi~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-----~~g~~~ 70 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEAGA---DIFFTYWTAYDKEMPWGVDQDEQIQL-----QEELL-----KNGVKV 70 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHHCCC---eEEEEecccccccccccccHHHHHHH-----HHHHH-----hcCCeE
Confidence 5789999999996 799999999999986 6666644321100 01111110 11111 122468
Q ss_pred EEEEccCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHH-hc--
Q psy7538 101 QVISGDITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSK-QM-- 163 (543)
Q Consensus 101 ~~i~gDl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~-~~-- 163 (543)
.++.+|+++++ ++..+++ .+|+|||+|+.... .+.++..+++|+.|...+.+.+. .+
T Consensus 71 ~~~~~D~~~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 144 (256)
T PRK12859 71 SSMELDLTQND------APKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDK 144 (256)
T ss_pred EEEEcCCCCHH------HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh
Confidence 88999999876 5554443 47999999986532 12355679999999888864443 22
Q ss_pred cCCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh--
Q psy7538 164 KNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-- 241 (543)
Q Consensus 164 ~~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-- 241 (543)
.+-.++|++||..+..... ....|+.+|+..+.+.+..+.
T Consensus 145 ~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~l~~~la~~~ 186 (256)
T PRK12859 145 KSGGRIINMTSGQFQGPMV--------------------------------------GELAYAATKGAIDALTSSLAAEV 186 (256)
T ss_pred cCCeEEEEEcccccCCCCC--------------------------------------CchHHHHHHHHHHHHHHHHHHHh
Confidence 1345999999985532110 116899999999999877654
Q ss_pred --cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCC
Q psy7538 242 --LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKE 319 (543)
Q Consensus 242 --~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~ 319 (543)
+++.++.++|+.|-.+.. . .......... .....+...+|++++++.++.....
T Consensus 187 ~~~~i~v~~v~PG~i~t~~~-----------~-~~~~~~~~~~---------~~~~~~~~~~d~a~~~~~l~s~~~~--- 242 (256)
T PRK12859 187 AHLGITVNAINPGPTDTGWM-----------T-EEIKQGLLPM---------FPFGRIGEPKDAARLIKFLASEEAE--- 242 (256)
T ss_pred hhhCeEEEEEEEccccCCCC-----------C-HHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCcccc---
Confidence 579999999987744311 0 1111111110 0112345679999998877654321
Q ss_pred CCCCcEEEeecC
Q psy7538 320 SERKSVCNLTSN 331 (543)
Q Consensus 320 ~~~~~vyni~s~ 331 (543)
-..++++.+.++
T Consensus 243 ~~~G~~i~~dgg 254 (256)
T PRK12859 243 WITGQIIHSEGG 254 (256)
T ss_pred CccCcEEEeCCC
Confidence 124666655443
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.3e-12 Score=125.82 Aligned_cols=201 Identities=12% Similarity=0.077 Sum_probs=130.9
Q ss_pred EEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCCCC
Q psy7538 33 IFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQLKL 112 (543)
Q Consensus 33 VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~~l 112 (543)
|+||||||+||++++++|++.|. +|.++.|+... +.+++ .+.++ ....++.++.+|+++++
T Consensus 1 vlItGas~giG~~~a~~l~~~G~---~v~~~~~~~~~-----~~~~~-----~~~l~-----~~~~~~~~~~~Dl~~~~- 61 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGF---EICVHYHSGRS-----DAESV-----VSAIQ-----AQGGNARLLQFDVADRV- 61 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCCHH-----HHHHH-----HHHHH-----HcCCeEEEEEccCCCHH-
Confidence 68999999999999999999986 67788775421 12111 11111 12246889999999875
Q ss_pred CCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHH-hc---cCCceEEEEec
Q psy7538 113 GISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSK-QM---KNLKCFTYIST 174 (543)
Q Consensus 113 gls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~-~~---~~l~~~V~vST 174 (543)
++..+++ .+|++||+|+.... .+.++..+++|+.|+.++++.+. .+ .+..++|++||
T Consensus 62 -----~~~~~~~~~~~~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS 136 (239)
T TIGR01831 62 -----ACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLAS 136 (239)
T ss_pred -----HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcc
Confidence 4544433 47999999986431 24456689999999999988763 11 24468999999
Q ss_pred CccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEEEe
Q psy7538 175 AYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMILR 250 (543)
Q Consensus 175 ~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~IlR 250 (543)
..+.... |. ...|+.+|+..+.+.+..+. .++++..++
T Consensus 137 ~~~~~~~----------~~----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~ 178 (239)
T TIGR01831 137 VSGVMGN----------RG----------------------------QVNYSAAKAGLIGATKALAVELAKRKITVNCIA 178 (239)
T ss_pred hhhccCC----------CC----------------------------CcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEE
Confidence 7442211 00 15799999988877766543 589999999
Q ss_pred cCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhh
Q psy7538 251 PSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDF 314 (543)
Q Consensus 251 ps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~ 314 (543)
|+.|.++.....+ .......... ...-+...+|++++++.++...
T Consensus 179 Pg~v~t~~~~~~~----------~~~~~~~~~~---------~~~~~~~~~~va~~~~~l~~~~ 223 (239)
T TIGR01831 179 PGLIDTEMLAEVE----------HDLDEALKTV---------PMNRMGQPAEVASLAGFLMSDG 223 (239)
T ss_pred EccCccccchhhh----------HHHHHHHhcC---------CCCCCCCHHHHHHHHHHHcCch
Confidence 9988655322111 0111111111 0112346699999998887654
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.5e-12 Score=127.29 Aligned_cols=167 Identities=16% Similarity=0.171 Sum_probs=114.0
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+++||||||+||.+++++|++.|. +|.++.|+.. .+++. -+.++. .....+.++.+|++++
T Consensus 1 k~vlItGas~giG~~la~~la~~G~---~vv~~~r~~~------~~~~~-----~~~~~~----~~~~~~~~~~~D~~~~ 62 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGA---ELFLTDRDAD------GLAQT-----VADARA----LGGTVPEHRALDISDY 62 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHH-----HHHHHh----cCCCcceEEEeeCCCH
Confidence 5799999999999999999999986 6788888642 11111 011111 1112345678999987
Q ss_pred CCCCCHHHHHHHh-------cCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHh----ccCCceEEEE
Q psy7538 111 KLGISEIDKKELI-------DNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQ----MKNLKCFTYI 172 (543)
Q Consensus 111 ~lgls~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~----~~~l~~~V~v 172 (543)
+ ++..++ .++|+|||+||.... .+.++..+++|+.|+.++++++.. .+...++|++
T Consensus 63 ~------~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~i 136 (272)
T PRK07832 63 D------AVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNV 136 (272)
T ss_pred H------HHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 5 444333 358999999986432 234567899999999999998753 1123689999
Q ss_pred ecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEE
Q psy7538 173 STAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMI 248 (543)
Q Consensus 173 ST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~I 248 (543)
||..+.... | ....|+.+|+..+.+...... +++++++
T Consensus 137 sS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~ 178 (272)
T PRK07832 137 SSAAGLVAL----------P----------------------------WHAAYSASKFGLRGLSEVLRFDLARHGIGVSV 178 (272)
T ss_pred ccccccCCC----------C----------------------------CCcchHHHHHHHHHHHHHHHHHhhhcCcEEEE
Confidence 997542111 0 115799999977766654432 5899999
Q ss_pred EecCeeeecCC
Q psy7538 249 LRPSIVVPIYK 259 (543)
Q Consensus 249 lRps~V~G~~~ 259 (543)
++|+.|.++..
T Consensus 179 v~Pg~v~t~~~ 189 (272)
T PRK07832 179 VVPGAVKTPLV 189 (272)
T ss_pred EecCcccCcch
Confidence 99999976643
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.4e-12 Score=142.19 Aligned_cols=168 Identities=14% Similarity=0.099 Sum_probs=121.1
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
-+++++++||||||+||++++++|.+.|+ +|.++.|+... .+.+.+ .++ ....++.++.+|
T Consensus 312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~---~v~~~~r~~~~---~~~~~~--------~~~-----~~~~~~~~~~~D 372 (582)
T PRK05855 312 PFSGKLVVVTGAGSGIGRETALAFAREGA---EVVASDIDEAA---AERTAE--------LIR-----AAGAVAHAYRVD 372 (582)
T ss_pred cCCCCEEEEECCcCHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHH--------HHH-----hcCCeEEEEEcC
Confidence 45789999999999999999999999987 78888886421 111111 111 112367899999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHh----ccCCce
Q psy7538 107 ITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQ----MKNLKC 168 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~----~~~l~~ 168 (543)
+++++ +++.+++ .+|++||+||.... .+.+...+++|+.|+.++.+++.. .+.-.+
T Consensus 373 v~~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~ 446 (582)
T PRK05855 373 VSDAD------AMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGH 446 (582)
T ss_pred CCCHH------HHHHHHHHHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcE
Confidence 99976 5555543 48999999997542 234566889999999998887643 211258
Q ss_pred EEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCC
Q psy7538 169 FTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGM 244 (543)
Q Consensus 169 ~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~l 244 (543)
+|++||..+...... -..|+.||+..+.+.+..+. +|+
T Consensus 447 iv~~sS~~~~~~~~~--------------------------------------~~~Y~~sKaa~~~~~~~l~~e~~~~gi 488 (582)
T PRK05855 447 IVNVASAAAYAPSRS--------------------------------------LPAYATSKAAVLMLSECLRAELAAAGI 488 (582)
T ss_pred EEEECChhhccCCCC--------------------------------------CcHHHHHHHHHHHHHHHHHHHhcccCc
Confidence 999999866542110 16899999988888766543 589
Q ss_pred cEEEEecCeeeec
Q psy7538 245 PCMILRPSIVVPI 257 (543)
Q Consensus 245 p~~IlRps~V~G~ 257 (543)
.+++++|+.|-.+
T Consensus 489 ~v~~v~Pg~v~t~ 501 (582)
T PRK05855 489 GVTAICPGFVDTN 501 (582)
T ss_pred EEEEEEeCCCccc
Confidence 9999999987443
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.4e-11 Score=123.96 Aligned_cols=224 Identities=10% Similarity=0.095 Sum_probs=141.0
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCC---CCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEE
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKG---KTPNQRVEELFESPVFDALKTLRGKSILQKIQVI 103 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~---~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i 103 (543)
.+++|+++||||+|.||++++++|++.|. +|+++.|.... ....+++++.. +.++ ....++.++
T Consensus 3 ~l~~k~~lITGas~GIG~aia~~la~~G~---~vii~~~~~~~~~~~~~~~~~~~~~-----~~l~-----~~~~~~~~~ 69 (286)
T PRK07791 3 LLDGRVVIVTGAGGGIGRAHALAFAAEGA---RVVVNDIGVGLDGSASGGSAAQAVV-----DEIV-----AAGGEAVAN 69 (286)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEeeCCccccccccchhHHHHHH-----HHHH-----hcCCceEEE
Confidence 46789999999999999999999999986 67777665310 00112222211 1111 112357788
Q ss_pred EccCCCCCCCCCHHHHHHHh-------cCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc----c-
Q psy7538 104 SGDITQLKLGISEIDKKELI-------DNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM----K- 164 (543)
Q Consensus 104 ~gDl~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~- 164 (543)
.+|+++++ ++..++ ..+|++||+||.... .+.++..+++|+.|+..+.+++... .
T Consensus 70 ~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~ 143 (286)
T PRK07791 70 GDDIADWD------GAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESK 143 (286)
T ss_pred eCCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcc
Confidence 99999875 444433 358999999997531 2446678999999999888777431 0
Q ss_pred -C---CceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHh
Q psy7538 165 -N---LKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECM 240 (543)
Q Consensus 165 -~---l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~ 240 (543)
+ -.++|++||..+..... ....|+.||+..+.+.+..+
T Consensus 144 ~~~~~~g~Iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaal~~l~~~la 185 (286)
T PRK07791 144 AGRAVDARIINTSSGAGLQGSV--------------------------------------GQGNYSAAKAGIAALTLVAA 185 (286)
T ss_pred cCCCCCcEEEEeCchhhCcCCC--------------------------------------CchhhHHHHHHHHHHHHHHH
Confidence 0 14899999975532110 01589999999998887654
Q ss_pred h----cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcc
Q psy7538 241 E----LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLN 316 (543)
Q Consensus 241 ~----~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~ 316 (543)
. +|+.+..+.|+ +..+ . . . .......... +.........+|++++++.++.....
T Consensus 186 ~el~~~gIrVn~v~Pg-~~T~----~-------~-~-~~~~~~~~~~-------~~~~~~~~~pedva~~~~~L~s~~~~ 244 (286)
T PRK07791 186 AELGRYGVTVNAIAPA-ARTR----M-------T-E-TVFAEMMAKP-------EEGEFDAMAPENVSPLVVWLGSAESR 244 (286)
T ss_pred HHHHHhCeEEEEECCC-CCCC----c-------c-h-hhHHHHHhcC-------cccccCCCCHHHHHHHHHHHhCchhc
Confidence 4 58999999997 3111 0 0 0 0111111100 11112356789999999887754322
Q ss_pred cCCCCCCcEEEeecC
Q psy7538 317 SKESERKSVCNLTSN 331 (543)
Q Consensus 317 ~~~~~~~~vyni~s~ 331 (543)
...|+++.+.++
T Consensus 245 ---~itG~~i~vdgG 256 (286)
T PRK07791 245 ---DVTGKVFEVEGG 256 (286)
T ss_pred ---CCCCcEEEEcCC
Confidence 134777777665
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.9e-12 Score=126.33 Aligned_cols=169 Identities=14% Similarity=0.118 Sum_probs=116.5
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||+|+||++++++|++.|. +|+++.|+.. ++++. .+.+.... ...++..+.+|+
T Consensus 6 l~~k~~lItGas~giG~~ia~~l~~~G~---~V~~~~r~~~------~~~~~-----~~~~~~~~---~~~~~~~~~~D~ 68 (265)
T PRK07062 6 LEGRVAVVTGGSSGIGLATVELLLEAGA---SVAICGRDEE------RLASA-----EARLREKF---PGARLLAARCDV 68 (265)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC---eEEEEeCCHH------HHHHH-----HHHHHhhC---CCceEEEEEecC
Confidence 5789999999999999999999999987 7888888642 22211 11121111 123688899999
Q ss_pred CCCCCCCCHHHHHHHh-------cCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHh-c--cCCceEE
Q psy7538 108 TQLKLGISEIDKKELI-------DNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQ-M--KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--~~l~~~V 170 (543)
++++ +++.++ ..+|++||+||.... .+.+...+++|+.+...+.+.+.. + .+..++|
T Consensus 69 ~~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv 142 (265)
T PRK07062 69 LDEA------DVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIV 142 (265)
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEE
Confidence 9875 454443 358999999996432 234566788998887777665533 1 1346999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... ....|+.+|+..+.+.+..+. .|+.+
T Consensus 143 ~isS~~~~~~~~--------------------------------------~~~~y~asKaal~~~~~~la~e~~~~gi~v 184 (265)
T PRK07062 143 CVNSLLALQPEP--------------------------------------HMVATSAARAGLLNLVKSLATELAPKGVRV 184 (265)
T ss_pred EeccccccCCCC--------------------------------------CchHhHHHHHHHHHHHHHHHHHhhhcCeEE
Confidence 999986532211 015799999987777765443 58999
Q ss_pred EEEecCeeeec
Q psy7538 247 MILRPSIVVPI 257 (543)
Q Consensus 247 ~IlRps~V~G~ 257 (543)
..++|+.|-.+
T Consensus 185 ~~i~PG~v~t~ 195 (265)
T PRK07062 185 NSILLGLVESG 195 (265)
T ss_pred EEEecCccccc
Confidence 99999987543
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.9e-11 Score=121.67 Aligned_cols=222 Identities=10% Similarity=0.021 Sum_probs=135.7
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
++++||||+|+||++++++|++.|. +|+++.|... ++++++ -+.+.. ....++..+.+|++++
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~---~V~~~~~~~~-----~~~~~~-----~~~l~~----~~~~~~~~~~~Dv~d~ 64 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGY---RVVLHYHRSA-----AAASTL-----AAELNA----RRPNSAVTCQADLSNS 64 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCC---eEEEEcCCcH-----HHHHHH-----HHHHHh----ccCCceEEEEccCCCc
Confidence 5799999999999999999999987 6777776532 112111 111111 1123566789999997
Q ss_pred CCCCCHHHHHHH-------hcCccEEEEcCccCCC------c-c-----------cHHHHHHHHHHHHHHHHHHHHhc-c
Q psy7538 111 KLGISEIDKKEL-------IDNVDIVYHVAATIRF------D-E-----------PIKTAVILNTRGTRDMLELSKQM-K 164 (543)
Q Consensus 111 ~lgls~~~~~~l-------~~~vd~ViH~AA~v~~------~-~-----------~~~~~~~~Nv~gt~~ll~~a~~~-~ 164 (543)
+-- .+.++.+ ...+|+|||+||.... + + .+...+++|+.|+..+.+++... .
T Consensus 65 ~~~--~~~~~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~ 142 (267)
T TIGR02685 65 ATL--FSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQA 142 (267)
T ss_pred hhh--HHHHHHHHHHHHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhh
Confidence 510 0011222 2368999999986421 1 1 25567999999999998876432 1
Q ss_pred --------CCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHH
Q psy7538 165 --------NLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLV 236 (543)
Q Consensus 165 --------~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v 236 (543)
.-..+|.+||..+.... | ..+.|+.||+..|.++
T Consensus 143 ~~~~~~~~~~~~iv~~~s~~~~~~~----------~----------------------------~~~~Y~asK~a~~~~~ 184 (267)
T TIGR02685 143 GTRAEQRSTNLSIVNLCDAMTDQPL----------L----------------------------GFTMYTMAKHALEGLT 184 (267)
T ss_pred hcccccCCCCeEEEEehhhhccCCC----------c----------------------------ccchhHHHHHHHHHHH
Confidence 11357777765432110 0 0168999999999999
Q ss_pred HHHhh----cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhh
Q psy7538 237 AECME----LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTW 312 (543)
Q Consensus 237 ~~~~~----~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~ 312 (543)
+..+. .|+++..++|+.+..+...+ ........... + ........+|++++++.++.
T Consensus 185 ~~la~e~~~~gi~v~~v~PG~~~~~~~~~-----------~~~~~~~~~~~----~----~~~~~~~~~~va~~~~~l~~ 245 (267)
T TIGR02685 185 RSAALELAPLQIRVNGVAPGLSLLPDAMP-----------FEVQEDYRRKV----P----LGQREASAEQIADVVIFLVS 245 (267)
T ss_pred HHHHHHHhhhCeEEEEEecCCccCccccc-----------hhHHHHHHHhC----C----CCcCCCCHHHHHHHHHHHhC
Confidence 87654 58999999999875432110 11111111110 0 00124578999999998876
Q ss_pred hhcccCCCCCCcEEEeecC
Q psy7538 313 DFLNSKESERKSVCNLTSN 331 (543)
Q Consensus 313 ~~~~~~~~~~~~vyni~s~ 331 (543)
.... ...+..+.+.++
T Consensus 246 ~~~~---~~~G~~~~v~gg 261 (267)
T TIGR02685 246 PKAK---YITGTCIKVDGG 261 (267)
T ss_pred cccC---CcccceEEECCc
Confidence 5422 124667777655
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=2e-11 Score=120.76 Aligned_cols=168 Identities=16% Similarity=0.151 Sum_probs=117.9
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|.||+.+++.|++.|. +|.++.|+.. +++++ -+.+. .....++..+.+|+
T Consensus 5 ~~~k~vlItG~~~giG~~ia~~l~~~G~---~V~~~~r~~~------~~~~~-----~~~l~----~~~~~~~~~~~~D~ 66 (259)
T PRK06125 5 LAGKRVLITGASKGIGAAAAEAFAAEGC---HLHLVARDAD------ALEAL-----AADLR----AAHGVDVAVHALDL 66 (259)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCC---EEEEEeCCHH------HHHHH-----HHHHH----hhcCCceEEEEecC
Confidence 4689999999999999999999999986 7888888642 22111 01111 11124678899999
Q ss_pred CCCCCCCCHHHHHHHhc---CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHh-c--cCCceEEEEec
Q psy7538 108 TQLKLGISEIDKKELID---NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQ-M--KNLKCFTYIST 174 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~---~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--~~l~~~V~vST 174 (543)
++++ ++..+++ .+|++||+|+.... .+.++..+++|+.|...+.+.+.. + .+-.++|++||
T Consensus 67 ~~~~------~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss 140 (259)
T PRK06125 67 SSPE------AREQLAAEAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIG 140 (259)
T ss_pred CCHH------HHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecC
Confidence 9875 5555544 58999999986431 134566899999999988887632 1 12357999988
Q ss_pred CccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEEEe
Q psy7538 175 AYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMILR 250 (543)
Q Consensus 175 ~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~IlR 250 (543)
..+..... . ...|+.+|+..+.+.+..+. .++++..+.
T Consensus 141 ~~~~~~~~---------~-----------------------------~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~ 182 (259)
T PRK06125 141 AAGENPDA---------D-----------------------------YICGSAGNAALMAFTRALGGKSLDDGVRVVGVN 182 (259)
T ss_pred ccccCCCC---------C-----------------------------chHhHHHHHHHHHHHHHHHHHhCccCeEEEEEe
Confidence 74421100 0 05789999999888877643 589999999
Q ss_pred cCeeeec
Q psy7538 251 PSIVVPI 257 (543)
Q Consensus 251 ps~V~G~ 257 (543)
|+.|-.+
T Consensus 183 PG~v~t~ 189 (259)
T PRK06125 183 PGPVATD 189 (259)
T ss_pred cCccccH
Confidence 9877554
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=99.42 E-value=1e-11 Score=126.91 Aligned_cols=174 Identities=16% Similarity=0.181 Sum_probs=117.2
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
.|+.++||||||.||++++++|.+.|. +|.++.|+. ++++++ -+.++... + ..++..+.+|++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~---~Vil~~R~~------~~l~~~-----~~~l~~~~-~--~~~~~~~~~Dl~ 114 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGL---NLVLVARNP------DKLKDV-----SDSIQSKY-S--KTQIKTVVVDFS 114 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCC---CEEEEECCH------HHHHHH-----HHHHHHHC-C--CcEEEEEEEECC
Confidence 489999999999999999999999986 688888864 233322 11222111 1 135778889998
Q ss_pred CCCCCCCHHHHHHHhcC--ccEEEEcCccCC-----C----cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEEEEec
Q psy7538 109 QLKLGISEIDKKELIDN--VDIVYHVAATIR-----F----DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFTYIST 174 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~--vd~ViH~AA~v~-----~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~vST 174 (543)
+. +.-..+++.+.+.+ +|++||+||... + .+..+..+++|+.|+..+.+++... .+..++|++||
T Consensus 115 ~~-~~~~~~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS 193 (320)
T PLN02780 115 GD-IDEGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGS 193 (320)
T ss_pred CC-cHHHHHHHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEec
Confidence 52 10001223333343 569999998642 1 1234568999999999998887531 24578999999
Q ss_pred CccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEEEe
Q psy7538 175 AYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMILR 250 (543)
Q Consensus 175 ~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~IlR 250 (543)
..+.... +.|. ...|+.||+..+.+.+..+. .|+.+.++.
T Consensus 194 ~a~~~~~--------~~p~----------------------------~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~ 237 (320)
T PLN02780 194 GAAIVIP--------SDPL----------------------------YAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQV 237 (320)
T ss_pred hhhccCC--------CCcc----------------------------chHHHHHHHHHHHHHHHHHHHHhccCeEEEEEe
Confidence 8653210 0010 16899999999998877654 589999999
Q ss_pred cCeeee
Q psy7538 251 PSIVVP 256 (543)
Q Consensus 251 ps~V~G 256 (543)
|+.|-.
T Consensus 238 PG~v~T 243 (320)
T PLN02780 238 PLYVAT 243 (320)
T ss_pred eCceec
Confidence 997743
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.9e-11 Score=127.55 Aligned_cols=107 Identities=20% Similarity=0.262 Sum_probs=81.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+|+||||||+||++++++|.+.|. +|.++.|.+. ++++.. .....++..+.+|+
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~G~---~Vi~l~r~~~------~l~~~~-------------~~~~~~v~~v~~Dv 233 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQGA---KVVALTSNSD------KITLEI-------------NGEDLPVKTLHWQV 233 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHH-------------hhcCCCeEEEEeeC
Confidence 4689999999999999999999999986 7888888642 221111 01112466788999
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCccCCC----cccHHHHHHHHHHHHHHHHHHHHh
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAATIRF----DEPIKTAVILNTRGTRDMLELSKQ 162 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~----~~~~~~~~~~Nv~gt~~ll~~a~~ 162 (543)
++++ ++...+.++|++||+||.... .+..+..+++|+.|+.++++++..
T Consensus 234 sd~~------~v~~~l~~IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp 286 (406)
T PRK07424 234 GQEA------ALAELLEKVDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFT 286 (406)
T ss_pred CCHH------HHHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9865 678888899999999986432 234567899999999999999754
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=4.7e-11 Score=117.84 Aligned_cols=219 Identities=11% Similarity=0.058 Sum_probs=142.2
Q ss_pred cCCCEEEEEcCc--chhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 28 YENKSIFLSGGS--GFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 28 ~~~~~VlITGat--GFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
++||+++||||+ +-||+.++++|++.|. +|++..|+.+ ..+.++++ . ..++.++.+
T Consensus 5 l~~k~~lItGas~~~gIG~a~a~~la~~G~---~Vi~~~r~~~---~~~~~~~~--------------~--~~~~~~~~~ 62 (252)
T PRK06079 5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGA---TVIYTYQNDR---MKKSLQKL--------------V--DEEDLLVEC 62 (252)
T ss_pred cCCCEEEEeCCCCCCchHHHHHHHHHHCCC---EEEEecCchH---HHHHHHhh--------------c--cCceeEEeC
Confidence 578999999999 7999999999999987 7888877521 12222221 1 135778999
Q ss_pred cCCCCCCCCCHHHHHHHh-------cCccEEEEcCccCCC-----------cccHHHHHHHHHHHHHHHHHHHHhc-cCC
Q psy7538 106 DITQLKLGISEIDKKELI-------DNVDIVYHVAATIRF-----------DEPIKTAVILNTRGTRDMLELSKQM-KNL 166 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~-----------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l 166 (543)
|+++++ +++.++ .++|++||+||.... .+.++..+++|+.|+..+.+.+... .+-
T Consensus 63 Dl~~~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~ 136 (252)
T PRK06079 63 DVASDE------SIERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPG 136 (252)
T ss_pred CCCCHH------HHHHHHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccC
Confidence 999875 454443 358999999986421 1345667899999999988887652 222
Q ss_pred ceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----c
Q psy7538 167 KCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----L 242 (543)
Q Consensus 167 ~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~ 242 (543)
.++|++||..+.... | ....|+.||+..+.+.+..+. +
T Consensus 137 g~Iv~iss~~~~~~~----------~----------------------------~~~~Y~asKaal~~l~~~la~el~~~ 178 (252)
T PRK06079 137 ASIVTLTYFGSERAI----------P----------------------------NYNVMGIAKAALESSVRYLARDLGKK 178 (252)
T ss_pred ceEEEEeccCccccC----------C----------------------------cchhhHHHHHHHHHHHHHHHHHhhhc
Confidence 589999987543211 0 016899999999999877654 5
Q ss_pred CCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCC
Q psy7538 243 GMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322 (543)
Q Consensus 243 ~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~ 322 (543)
|+.+..+.|+.|-.+... ................ ....+...+|+++++..++..... . ..
T Consensus 179 gI~vn~i~PG~v~T~~~~-------~~~~~~~~~~~~~~~~---------p~~r~~~pedva~~~~~l~s~~~~-~--it 239 (252)
T PRK06079 179 GIRVNAISAGAVKTLAVT-------GIKGHKDLLKESDSRT---------VDGVGVTIEEVGNTAAFLLSDLST-G--VT 239 (252)
T ss_pred CcEEEEEecCcccccccc-------cCCChHHHHHHHHhcC---------cccCCCCHHHHHHHHHHHhCcccc-c--cc
Confidence 899999999988543211 1111112222221111 112356779999999888765332 1 23
Q ss_pred CcEEEeecC
Q psy7538 323 KSVCNLTSN 331 (543)
Q Consensus 323 ~~vyni~s~ 331 (543)
+++..+.++
T Consensus 240 G~~i~vdgg 248 (252)
T PRK06079 240 GDIIYVDKG 248 (252)
T ss_pred ccEEEeCCc
Confidence 556655443
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=5e-12 Score=135.47 Aligned_cols=164 Identities=16% Similarity=0.169 Sum_probs=117.8
Q ss_pred hhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 26 KTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 26 ~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
...++++++||||+|.||+.++++|.+.|. +|.++.|+... +.++++.+ + -+...+.+
T Consensus 206 ~~~~g~~vlItGasggIG~~la~~l~~~Ga---~vi~~~~~~~~----~~l~~~~~---------~------~~~~~~~~ 263 (450)
T PRK08261 206 RPLAGKVALVTGAARGIGAAIAEVLARDGA---HVVCLDVPAAG----EALAAVAN---------R------VGGTALAL 263 (450)
T ss_pred cCCCCCEEEEecCCCHHHHHHHHHHHHCCC---EEEEEeCCccH----HHHHHHHH---------H------cCCeEEEE
Confidence 345789999999999999999999999986 78888875422 22322210 0 12346788
Q ss_pred cCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCce
Q psy7538 106 DITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKC 168 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~ 168 (543)
|+++++ +++.+++ ++|+|||+|+.... .+.++..+++|+.|+.++.+++... ..-.+
T Consensus 264 Dv~~~~------~~~~~~~~~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~ 337 (450)
T PRK08261 264 DITAPD------APARIAEHLAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGR 337 (450)
T ss_pred eCCCHH------HHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCE
Confidence 999875 4544443 58999999997542 2456678999999999999999763 12268
Q ss_pred EEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCC
Q psy7538 169 FTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGM 244 (543)
Q Consensus 169 ~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~l 244 (543)
||++||..+..... ....|+.+|+..+.++..... .++
T Consensus 338 iv~~SS~~~~~g~~--------------------------------------~~~~Y~asKaal~~~~~~la~el~~~gi 379 (450)
T PRK08261 338 IVGVSSISGIAGNR--------------------------------------GQTNYAASKAGVIGLVQALAPLLAERGI 379 (450)
T ss_pred EEEECChhhcCCCC--------------------------------------CChHHHHHHHHHHHHHHHHHHHHhhhCc
Confidence 99999985532110 016899999977777766543 589
Q ss_pred cEEEEecCeee
Q psy7538 245 PCMILRPSIVV 255 (543)
Q Consensus 245 p~~IlRps~V~ 255 (543)
++..+.|+.|-
T Consensus 380 ~v~~v~PG~i~ 390 (450)
T PRK08261 380 TINAVAPGFIE 390 (450)
T ss_pred EEEEEEeCcCc
Confidence 99999999764
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.6e-11 Score=120.53 Aligned_cols=107 Identities=21% Similarity=0.230 Sum_probs=80.9
Q ss_pred hhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 26 KTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 26 ~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
+-+++|+++||||+|+||++++++|++.|. +|+++.|.+.. +.+.. .. .....+.+
T Consensus 10 ~~l~~k~~lITGas~gIG~ala~~l~~~G~---~Vi~~~r~~~~-----~~~~~--------------~~--~~~~~~~~ 65 (245)
T PRK12367 10 STWQGKRIGITGASGALGKALTKAFRAKGA---KVIGLTHSKIN-----NSESN--------------DE--SPNEWIKW 65 (245)
T ss_pred HhhCCCEEEEEcCCcHHHHHHHHHHHHCCC---EEEEEECCchh-----hhhhh--------------cc--CCCeEEEe
Confidence 446889999999999999999999999986 78888886521 11100 00 11256788
Q ss_pred cCCCCCCCCCHHHHHHHhcCccEEEEcCccCCC----cccHHHHHHHHHHHHHHHHHHHHh
Q psy7538 106 DITQLKLGISEIDKKELIDNVDIVYHVAATIRF----DEPIKTAVILNTRGTRDMLELSKQ 162 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~----~~~~~~~~~~Nv~gt~~ll~~a~~ 162 (543)
|+++.+ ++...+.++|++||+||.... .+.++..+++|+.|+.++++++..
T Consensus 66 D~~~~~------~~~~~~~~iDilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 120 (245)
T PRK12367 66 ECGKEE------SLDKQLASLDVLILNHGINPGGRQDPENINKALEINALSSWRLLELFED 120 (245)
T ss_pred eCCCHH------HHHHhcCCCCEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 998865 677777889999999986432 245677899999999999998765
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=4.5e-11 Score=118.35 Aligned_cols=221 Identities=14% Similarity=0.042 Sum_probs=140.3
Q ss_pred cCCCEEEEEcCc--chhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 28 YENKSIFLSGGS--GFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 28 ~~~~~VlITGat--GFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
++||+++||||+ +-||++++++|++.|. +|++..|..+. .+.++++. .+ ...+.++.+
T Consensus 8 ~~~k~~lItGas~g~GIG~a~a~~la~~G~---~v~l~~r~~~~---~~~~~~~~---------~~-----~~~~~~~~~ 67 (258)
T PRK07533 8 LAGKRGLVVGIANEQSIAWGCARAFRALGA---ELAVTYLNDKA---RPYVEPLA---------EE-----LDAPIFLPL 67 (258)
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCC---EEEEEeCChhh---HHHHHHHH---------Hh-----hccceEEec
Confidence 578999999998 4899999999999986 78888886421 22233221 11 123457889
Q ss_pred cCCCCCCCCCHHHHHHHh-------cCccEEEEcCccCCC-----------cccHHHHHHHHHHHHHHHHHHHHh-ccCC
Q psy7538 106 DITQLKLGISEIDKKELI-------DNVDIVYHVAATIRF-----------DEPIKTAVILNTRGTRDMLELSKQ-MKNL 166 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~-----------~~~~~~~~~~Nv~gt~~ll~~a~~-~~~l 166 (543)
|+++++ +++.++ ..+|++||+||.... .+.++..+++|+.|+..+.+.+.. ++.-
T Consensus 68 D~~~~~------~v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~ 141 (258)
T PRK07533 68 DVREPG------QLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNG 141 (258)
T ss_pred CcCCHH------HHHHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccC
Confidence 999875 555443 358999999986421 134567899999999999987754 3222
Q ss_pred ceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----c
Q psy7538 167 KCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----L 242 (543)
Q Consensus 167 ~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~ 242 (543)
.++|++||..+.... | ....|+.||+..+.+.+..+. +
T Consensus 142 g~Ii~iss~~~~~~~----------~----------------------------~~~~Y~asKaal~~l~~~la~el~~~ 183 (258)
T PRK07533 142 GSLLTMSYYGAEKVV----------E----------------------------NYNLMGPVKAALESSVRYLAAELGPK 183 (258)
T ss_pred CEEEEEeccccccCC----------c----------------------------cchhhHHHHHHHHHHHHHHHHHhhhc
Confidence 478999986442110 0 015899999999888876554 5
Q ss_pred CCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCC
Q psy7538 243 GMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322 (543)
Q Consensus 243 ~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~ 322 (543)
++.+..+.|+.|-.+..+. + ............. .....+...+|++++++.++..... -..
T Consensus 184 gI~Vn~v~PG~v~T~~~~~---~----~~~~~~~~~~~~~---------~p~~r~~~p~dva~~~~~L~s~~~~---~it 244 (258)
T PRK07533 184 GIRVHAISPGPLKTRAASG---I----DDFDALLEDAAER---------APLRRLVDIDDVGAVAAFLASDAAR---RLT 244 (258)
T ss_pred CcEEEEEecCCcCChhhhc---c----CCcHHHHHHHHhc---------CCcCCCCCHHHHHHHHHHHhChhhc---ccc
Confidence 8999999999775432111 0 0001111111111 0112356779999999888755322 124
Q ss_pred CcEEEeecC
Q psy7538 323 KSVCNLTSN 331 (543)
Q Consensus 323 ~~vyni~s~ 331 (543)
++++.+.++
T Consensus 245 G~~i~vdgg 253 (258)
T PRK07533 245 GNTLYIDGG 253 (258)
T ss_pred CcEEeeCCc
Confidence 666665543
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.39 E-value=1e-11 Score=122.96 Aligned_cols=224 Identities=12% Similarity=0.091 Sum_probs=142.0
Q ss_pred cCCCEEEEEcCc--chhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 28 YENKSIFLSGGS--GFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 28 ~~~~~VlITGat--GFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
++||+++||||+ +-||+.++++|++.|. +|++..|+......+++++++-+ ...++.++.+
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la~~G~---~v~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~ 66 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLHAAGA---ELGITYLPDEKGRFEKKVRELTE--------------PLNPSLFLPC 66 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHHHCCC---EEEEEecCcccchHHHHHHHHHh--------------ccCcceEeec
Confidence 468999999986 7999999999999987 67766665432222333333311 1124568889
Q ss_pred cCCCCCCCCCHHHHHHHh-------cCccEEEEcCccCC-------C----cccHHHHHHHHHHHHHHHHHHHHh-ccCC
Q psy7538 106 DITQLKLGISEIDKKELI-------DNVDIVYHVAATIR-------F----DEPIKTAVILNTRGTRDMLELSKQ-MKNL 166 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~-------~----~~~~~~~~~~Nv~gt~~ll~~a~~-~~~l 166 (543)
|+++++ +++.++ .++|++||+||... + .+.++..+++|+.|+..+.+++.. +..-
T Consensus 67 Dl~d~~------~v~~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~ 140 (258)
T PRK07370 67 DVQDDA------QIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEG 140 (258)
T ss_pred CcCCHH------HHHHHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhC
Confidence 999876 455443 25899999999642 1 134566889999999998887654 2222
Q ss_pred ceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----c
Q psy7538 167 KCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----L 242 (543)
Q Consensus 167 ~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~ 242 (543)
.++|++||..+.... |. ...|+.||+..+.+.+..+. +
T Consensus 141 g~Iv~isS~~~~~~~----------~~----------------------------~~~Y~asKaal~~l~~~la~el~~~ 182 (258)
T PRK07370 141 GSIVTLTYLGGVRAI----------PN----------------------------YNVMGVAKAALEASVRYLAAELGPK 182 (258)
T ss_pred CeEEEEeccccccCC----------cc----------------------------cchhhHHHHHHHHHHHHHHHHhCcC
Confidence 589999997543211 00 15899999999999887654 5
Q ss_pred CCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCC
Q psy7538 243 GMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322 (543)
Q Consensus 243 ~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~ 322 (543)
|+.+..+.|+.|-.+.....+ +........... ....-+...+|+++++..++..... . ..
T Consensus 183 gI~Vn~i~PG~v~T~~~~~~~-------~~~~~~~~~~~~---------~p~~r~~~~~dva~~~~fl~s~~~~-~--~t 243 (258)
T PRK07370 183 NIRVNAISAGPIRTLASSAVG-------GILDMIHHVEEK---------APLRRTVTQTEVGNTAAFLLSDLAS-G--IT 243 (258)
T ss_pred CeEEEEEecCcccCchhhccc-------cchhhhhhhhhc---------CCcCcCCCHHHHHHHHHHHhChhhc-c--cc
Confidence 799999999988554221110 000111111110 0112355679999999888764332 1 24
Q ss_pred CcEEEeecC
Q psy7538 323 KSVCNLTSN 331 (543)
Q Consensus 323 ~~vyni~s~ 331 (543)
++++.+.++
T Consensus 244 G~~i~vdgg 252 (258)
T PRK07370 244 GQTIYVDAG 252 (258)
T ss_pred CcEEEECCc
Confidence 566666543
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=3.3e-11 Score=119.54 Aligned_cols=222 Identities=13% Similarity=0.089 Sum_probs=139.0
Q ss_pred hcCCCEEEEEcC--cchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEE
Q psy7538 27 TYENKSIFLSGG--SGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVIS 104 (543)
Q Consensus 27 ~~~~~~VlITGa--tGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~ 104 (543)
++++|+++|||| ++-||++++++|++.|. +|++..|..+ ..++++++.. .......+.
T Consensus 3 ~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~---~v~~~~~~~~---~~~~~~~~~~--------------~~~~~~~~~ 62 (261)
T PRK08690 3 FLQGKKILITGMISERSIAYGIAKACREQGA---ELAFTYVVDK---LEERVRKMAA--------------ELDSELVFR 62 (261)
T ss_pred ccCCcEEEEECCCCCCcHHHHHHHHHHHCCC---EEEEEcCcHH---HHHHHHHHHh--------------ccCCceEEE
Confidence 478999999997 67999999999999986 6776666421 2233333311 111245788
Q ss_pred ccCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC--------c----ccHHHHHHHHHHHHHHHHHHHHhc--
Q psy7538 105 GDITQLKLGISEIDKKELID-------NVDIVYHVAATIRF--------D----EPIKTAVILNTRGTRDMLELSKQM-- 163 (543)
Q Consensus 105 gDl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~--------~----~~~~~~~~~Nv~gt~~ll~~a~~~-- 163 (543)
+|+++++ +++.+++ ++|++||+||.... + +.++..+++|+.|+..+.+.+..+
T Consensus 63 ~Dv~~~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~ 136 (261)
T PRK08690 63 CDVASDD------EINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMR 136 (261)
T ss_pred CCCCCHH------HHHHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhh
Confidence 9999876 5555543 58999999997531 1 234456789999988887766432
Q ss_pred cCCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh--
Q psy7538 164 KNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-- 241 (543)
Q Consensus 164 ~~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-- 241 (543)
++-.++|++||..+.... | .-..|+.||+..+.+.+..+.
T Consensus 137 ~~~g~Iv~iss~~~~~~~----------~----------------------------~~~~Y~asKaal~~l~~~la~e~ 178 (261)
T PRK08690 137 GRNSAIVALSYLGAVRAI----------P----------------------------NYNVMGMAKASLEAGIRFTAACL 178 (261)
T ss_pred hcCcEEEEEcccccccCC----------C----------------------------CcccchhHHHHHHHHHHHHHHHh
Confidence 122578999987543211 0 015799999999988776543
Q ss_pred --cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCC
Q psy7538 242 --LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKE 319 (543)
Q Consensus 242 --~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~ 319 (543)
+|+.+..+.|+.|-.+... ++ ...........+.. ....+...+|+|+++..++.....
T Consensus 179 ~~~gIrVn~i~PG~v~T~~~~---~~----~~~~~~~~~~~~~~---------p~~r~~~peevA~~v~~l~s~~~~--- 239 (261)
T PRK08690 179 GKEGIRCNGISAGPIKTLAAS---GI----ADFGKLLGHVAAHN---------PLRRNVTIEEVGNTAAFLLSDLSS--- 239 (261)
T ss_pred hhcCeEEEEEecCcccchhhh---cC----CchHHHHHHHhhcC---------CCCCCCCHHHHHHHHHHHhCcccC---
Confidence 6899999999987543211 11 00111111111110 112356789999999988765432
Q ss_pred CCCCcEEEeecC
Q psy7538 320 SERKSVCNLTSN 331 (543)
Q Consensus 320 ~~~~~vyni~s~ 331 (543)
-..+.++-+.++
T Consensus 240 ~~tG~~i~vdgG 251 (261)
T PRK08690 240 GITGEITYVDGG 251 (261)
T ss_pred CcceeEEEEcCC
Confidence 124556655544
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.4e-11 Score=119.33 Aligned_cols=153 Identities=14% Similarity=0.099 Sum_probs=111.8
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+++||||+|.||+++++.|++.|+ +|+++.|+. ++++++.+ . .++..+.+|++++
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~---~v~~~~r~~------~~~~~~~~-------------~--~~~~~~~~D~~~~ 56 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGH---KVTLVGARR------DDLEVAAK-------------E--LDVDAIVCDNTDP 56 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHHH-------------h--ccCcEEecCCCCH
Confidence 4799999999999999999999986 788888863 23322211 0 1356788999987
Q ss_pred CCCCCHHHHHHHhc----CccEEEEcCccCC---------C---cccHHHHHHHHHHHHHHHHHHHHhc-cCCceEEEEe
Q psy7538 111 KLGISEIDKKELID----NVDIVYHVAATIR---------F---DEPIKTAVILNTRGTRDMLELSKQM-KNLKCFTYIS 173 (543)
Q Consensus 111 ~lgls~~~~~~l~~----~vd~ViH~AA~v~---------~---~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~vS 173 (543)
+ +++.+++ .+|++||+|+... + .+.++..+++|+.|+.++++++... ..-.++|++|
T Consensus 57 ~------~v~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~is 130 (223)
T PRK05884 57 A------SLEEARGLFPHHLDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVV 130 (223)
T ss_pred H------HHHHHHHHHhhcCcEEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEe
Confidence 5 5655543 5899999997421 1 2346678999999999999988652 2225899999
Q ss_pred cCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEEE
Q psy7538 174 TAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMIL 249 (543)
Q Consensus 174 T~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~Il 249 (543)
|... . . ...|+.||+..+.+.+..+. +++.+..+
T Consensus 131 S~~~--~-----------~-----------------------------~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v 168 (223)
T PRK05884 131 PENP--P-----------A-----------------------------GSAEAAIKAALSNWTAGQAAVFGTRGITINAV 168 (223)
T ss_pred cCCC--C-----------C-----------------------------ccccHHHHHHHHHHHHHHHHHhhhcCeEEEEE
Confidence 8631 0 0 06899999999998877654 57899999
Q ss_pred ecCeee
Q psy7538 250 RPSIVV 255 (543)
Q Consensus 250 Rps~V~ 255 (543)
.|+.|.
T Consensus 169 ~PG~v~ 174 (223)
T PRK05884 169 ACGRSV 174 (223)
T ss_pred ecCccC
Confidence 998763
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.7e-11 Score=122.59 Aligned_cols=246 Identities=14% Similarity=0.067 Sum_probs=141.8
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+|+++|||| |+||++++++|. .|. +|+++.|... ++++.. +.++ ....++.++.+|+++
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~---~Vv~~~r~~~------~~~~~~-----~~l~-----~~~~~~~~~~~Dv~d 60 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGK---KVLLADYNEE------NLEAAA-----KTLR-----EAGFDVSTQEVDVSS 60 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCC---EEEEEeCCHH------HHHHHH-----HHHH-----hcCCeEEEEEeecCC
Confidence 478999998 789999999996 675 7888888642 122111 1111 112367889999998
Q ss_pred CCCCCCHHHHHHHhc------CccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhc-cCCceEEEEecCccccCCC
Q psy7538 110 LKLGISEIDKKELID------NVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQM-KNLKCFTYISTAYCHPSEK 182 (543)
Q Consensus 110 ~~lgls~~~~~~l~~------~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~vST~y~~~~~~ 182 (543)
++ ++..+++ .+|++||+||.....+.+...+++|+.|+.++++.+... ..-.+.|++||..+.....
T Consensus 61 ~~------~i~~~~~~~~~~g~id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~ 134 (275)
T PRK06940 61 RE------SVKALAATAQTLGPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPA 134 (275)
T ss_pred HH------HHHHHHHHHHhcCCCCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcc
Confidence 75 5555443 589999999976555678889999999999999988653 1114567777775432110
Q ss_pred cccccccCCCCChHHHHHHHhhcchhhhhhhh---hhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEEEecCeee
Q psy7538 183 VLEERTYLPPDDPHQVILRAESMKEEDLEVFR---QDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMILRPSIVV 255 (543)
Q Consensus 183 ~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~---p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~IlRps~V~ 255 (543)
...+..-. ....+...+.... +....+....|+.||+..+.+.+..+. +|+.+..+.||.|-
T Consensus 135 ~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~ 203 (275)
T PRK06940 135 LTAEQERA-----------LATTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIIS 203 (275)
T ss_pred cchhhhcc-----------ccccccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCc
Confidence 00000000 0000000000000 000001125899999998888876543 57999999999885
Q ss_pred ecCCCCCCCCCCCCCch-HHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecC
Q psy7538 256 PIYKEPLPGWTDNINGP-TGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSN 331 (543)
Q Consensus 256 G~~~~p~~gw~d~~~g~-~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~ 331 (543)
.+.... .+... ........... ...-+...+|+|+++..++..... -..+.++.+.++
T Consensus 204 T~~~~~------~~~~~~~~~~~~~~~~~---------p~~r~~~peeia~~~~fL~s~~~~---~itG~~i~vdgg 262 (275)
T PRK06940 204 TPLAQD------ELNGPRGDGYRNMFAKS---------PAGRPGTPDEIAALAEFLMGPRGS---FITGSDFLVDGG 262 (275)
T ss_pred Cccchh------hhcCCchHHHHHHhhhC---------CcccCCCHHHHHHHHHHHcCcccC---cccCceEEEcCC
Confidence 542210 00000 01111111100 112356789999998887754322 124666766554
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=4e-11 Score=118.72 Aligned_cols=223 Identities=10% Similarity=0.040 Sum_probs=141.0
Q ss_pred cCCCEEEEEcCc--chhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 28 YENKSIFLSGGS--GFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 28 ~~~~~VlITGat--GFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
++||+++||||+ +-||++++++|++.|. +|++..|..+. .++++++.+ +. . ..++.++.+
T Consensus 5 ~~~k~~lItGa~~s~GIG~aia~~la~~G~---~v~~~~r~~~~---~~~~~~~~~---------~~-~--~~~~~~~~~ 66 (257)
T PRK08594 5 LEGKTYVVMGVANKRSIAWGIARSLHNAGA---KLVFTYAGERL---EKEVRELAD---------TL-E--GQESLLLPC 66 (257)
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCC---EEEEecCcccc---hHHHHHHHH---------Hc-C--CCceEEEec
Confidence 478999999997 8999999999999987 77777775432 233433211 10 1 246778899
Q ss_pred cCCCCCCCCCHHHHHHHh-------cCccEEEEcCccCCC--------c---ccHHHHHHHHHHHHHHHHHHHHhc-cCC
Q psy7538 106 DITQLKLGISEIDKKELI-------DNVDIVYHVAATIRF--------D---EPIKTAVILNTRGTRDMLELSKQM-KNL 166 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~--------~---~~~~~~~~~Nv~gt~~ll~~a~~~-~~l 166 (543)
|+++++ +++.++ ..+|++||+|+.... + +.+...+++|+.+...+.+.+... ..-
T Consensus 67 Dv~d~~------~v~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 140 (257)
T PRK08594 67 DVTSDE------EITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEG 140 (257)
T ss_pred CCCCHH------HHHHHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccC
Confidence 999876 444443 348999999986421 1 234557889999998888777642 222
Q ss_pred ceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----c
Q psy7538 167 KCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----L 242 (543)
Q Consensus 167 ~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~ 242 (543)
.++|++||..+.... | ....|+.||+..+.+.+..+. +
T Consensus 141 g~Iv~isS~~~~~~~----------~----------------------------~~~~Y~asKaal~~l~~~la~el~~~ 182 (257)
T PRK08594 141 GSIVTLTYLGGERVV----------Q----------------------------NYNVMGVAKASLEASVKYLANDLGKD 182 (257)
T ss_pred ceEEEEcccCCccCC----------C----------------------------CCchhHHHHHHHHHHHHHHHHHhhhc
Confidence 589999998553211 0 015899999999998877654 5
Q ss_pred CCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCC
Q psy7538 243 GMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322 (543)
Q Consensus 243 ~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~ 322 (543)
|+.+..+.|+.|-.+.....+ .. .......... .....+...+|++++++.++..... -..
T Consensus 183 gIrvn~v~PG~v~T~~~~~~~----~~---~~~~~~~~~~---------~p~~r~~~p~~va~~~~~l~s~~~~---~~t 243 (257)
T PRK08594 183 GIRVNAISAGPIRTLSAKGVG----GF---NSILKEIEER---------APLRRTTTQEEVGDTAAFLFSDLSR---GVT 243 (257)
T ss_pred CCEEeeeecCcccCHhHhhhc----cc---cHHHHHHhhc---------CCccccCCHHHHHHHHHHHcCcccc---ccc
Confidence 799999999887543211000 00 0011111100 0112346679999998887754332 124
Q ss_pred CcEEEeecC
Q psy7538 323 KSVCNLTSN 331 (543)
Q Consensus 323 ~~vyni~s~ 331 (543)
+.+..+.++
T Consensus 244 G~~~~~dgg 252 (257)
T PRK08594 244 GENIHVDSG 252 (257)
T ss_pred ceEEEECCc
Confidence 566665443
|
|
| >KOG1205|consensus | Back alignment and domain information |
|---|
Probab=99.35 E-value=2e-11 Score=119.76 Aligned_cols=155 Identities=21% Similarity=0.247 Sum_probs=112.6
Q ss_pred hhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 26 KTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 26 ~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
+-..||.|+|||||.-||.+++..|.+.|. ++++++|.... .+|+.+ .+++.. +.. ++.++.+
T Consensus 8 e~~~~kvVvITGASsGIG~~lA~~la~~G~---~l~lvar~~rr---l~~v~~--------~l~~~~-~~~--~v~~~~~ 70 (282)
T KOG1205|consen 8 ERLAGKVVLITGASSGIGEALAYELAKRGA---KLVLVARRARR---LERVAE--------ELRKLG-SLE--KVLVLQL 70 (282)
T ss_pred HHhCCCEEEEeCCCcHHHHHHHHHHHhCCC---ceEEeehhhhh---HHHHHH--------HHHHhC-CcC--ccEEEeC
Confidence 467899999999999999999999999985 67777776543 233311 122211 222 7999999
Q ss_pred cCCCCCCCCCHHHHHH-------HhcCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCce
Q psy7538 106 DITQLKLGISEIDKKE-------LIDNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKC 168 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~-------l~~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~ 168 (543)
|+++.+ +.+. .+.++|+.||.||.... .+..+..+++|+.|+..+.+++..+ .+=.+
T Consensus 71 Dvs~~~------~~~~~~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~Gh 144 (282)
T KOG1205|consen 71 DVSDEE------SVKKFVEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGH 144 (282)
T ss_pred ccCCHH------HHHHHHHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCe
Confidence 999986 4553 34579999999997652 1345568999999998888877542 13368
Q ss_pred EEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh
Q psy7538 169 FTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME 241 (543)
Q Consensus 169 ~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~ 241 (543)
+|.+||..+.-.. |. ...|..||++.+.+....+.
T Consensus 145 IVvisSiaG~~~~----------P~----------------------------~~~Y~ASK~Al~~f~etLR~ 179 (282)
T KOG1205|consen 145 IVVISSIAGKMPL----------PF----------------------------RSIYSASKHALEGFFETLRQ 179 (282)
T ss_pred EEEEeccccccCC----------Cc----------------------------ccccchHHHHHHHHHHHHHH
Confidence 9999999765321 11 14899999999988877666
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=3e-11 Score=119.64 Aligned_cols=162 Identities=15% Similarity=0.209 Sum_probs=109.9
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+++||||+|.||+.++++|++.|+ +|+++.|+.. ++++. .+.+. . ..++.++.+|++++
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~---~V~~~~r~~~------~~~~~-----~~~l~-----~-~~~~~~~~~Dv~d~ 60 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGA---RVVISSRNEE------NLEKA-----LKELK-----E-YGEVYAVKADLSDK 60 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCC---EEEEEeCCHH------HHHHH-----HHHHH-----h-cCCceEEEcCCCCH
Confidence 5899999999999999999999986 7888888642 22211 11111 0 12577899999987
Q ss_pred CCCCCHHHHHHHh-------cCccEEEEcCccCC-----C-c---ccHHHHHHHHHHHHHHHHHHH----HhccCCceEE
Q psy7538 111 KLGISEIDKKELI-------DNVDIVYHVAATIR-----F-D---EPIKTAVILNTRGTRDMLELS----KQMKNLKCFT 170 (543)
Q Consensus 111 ~lgls~~~~~~l~-------~~vd~ViH~AA~v~-----~-~---~~~~~~~~~Nv~gt~~ll~~a----~~~~~l~~~V 170 (543)
+ +++.++ .++|+|||+||... + + +.+...+.+|+.++..+...+ .+.++-.++|
T Consensus 61 ~------~~~~~~~~~~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv 134 (259)
T PRK08340 61 D------DLKNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLV 134 (259)
T ss_pred H------HHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEE
Confidence 5 555554 36899999999642 1 1 223445678887766554433 2112346899
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... + ...|+.+|+..+.+.+..+. .|+.+
T Consensus 135 ~isS~~~~~~~~---------~-----------------------------~~~y~~sKaa~~~~~~~la~e~~~~gI~v 176 (259)
T PRK08340 135 YLSSVSVKEPMP---------P-----------------------------LVLADVTRAGLVQLAKGVSRTYGGKGIRA 176 (259)
T ss_pred EEeCcccCCCCC---------C-----------------------------chHHHHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 999985532110 0 15899999999998887665 47888
Q ss_pred EEEecCeeee
Q psy7538 247 MILRPSIVVP 256 (543)
Q Consensus 247 ~IlRps~V~G 256 (543)
..+.|+.|-.
T Consensus 177 ~~v~pG~v~t 186 (259)
T PRK08340 177 YTVLLGSFDT 186 (259)
T ss_pred EEeccCcccC
Confidence 8888886643
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=3.9e-11 Score=119.85 Aligned_cols=223 Identities=9% Similarity=0.046 Sum_probs=142.8
Q ss_pred hhcCCCEEEEEcCc--chhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEE
Q psy7538 26 KTYENKSIFLSGGS--GFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVI 103 (543)
Q Consensus 26 ~~~~~~~VlITGat--GFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i 103 (543)
..+++|+++||||+ +-||..++++|++.|. +|++..|... ..++++++.+ + ......+
T Consensus 6 ~~~~~k~~lItGas~~~GIG~aia~~la~~G~---~V~l~~r~~~---~~~~~~~l~~---------~-----~~~~~~~ 65 (272)
T PRK08159 6 GLMAGKRGLILGVANNRSIAWGIAKACRAAGA---ELAFTYQGDA---LKKRVEPLAA---------E-----LGAFVAG 65 (272)
T ss_pred ccccCCEEEEECCCCCCcHHHHHHHHHHHCCC---EEEEEcCchH---HHHHHHHHHH---------h-----cCCceEE
Confidence 46789999999997 7999999999999987 7777666421 2344443311 1 1234568
Q ss_pred EccCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-----------cccHHHHHHHHHHHHHHHHHHHHhc-c
Q psy7538 104 SGDITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-----------DEPIKTAVILNTRGTRDMLELSKQM-K 164 (543)
Q Consensus 104 ~gDl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-----------~~~~~~~~~~Nv~gt~~ll~~a~~~-~ 164 (543)
.+|+++++ +++.+++ .+|++||+|+.... .+.++..+++|+.|+..+++.+... .
T Consensus 66 ~~Dl~~~~------~v~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~ 139 (272)
T PRK08159 66 HCDVTDEA------SIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMT 139 (272)
T ss_pred ecCCCCHH------HHHHHHHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 89999875 5554432 58999999986531 1346678999999999999887653 2
Q ss_pred CCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh---
Q psy7538 165 NLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME--- 241 (543)
Q Consensus 165 ~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~--- 241 (543)
+-.++|++||..+... .|. ...|+.||+..+.+.+..+.
T Consensus 140 ~~g~Iv~iss~~~~~~----------~p~----------------------------~~~Y~asKaal~~l~~~la~el~ 181 (272)
T PRK08159 140 DGGSILTLTYYGAEKV----------MPH----------------------------YNVMGVAKAALEASVKYLAVDLG 181 (272)
T ss_pred CCceEEEEeccccccC----------CCc----------------------------chhhhhHHHHHHHHHHHHHHHhc
Confidence 2368999998643211 010 15799999999888876654
Q ss_pred -cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCC
Q psy7538 242 -LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKES 320 (543)
Q Consensus 242 -~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~ 320 (543)
+++.+..+.|+.|-.......+ .. ........... + ..-+...+|+|++++.++..... .
T Consensus 182 ~~gIrVn~v~PG~v~T~~~~~~~----~~----~~~~~~~~~~~------p--~~r~~~peevA~~~~~L~s~~~~---~ 242 (272)
T PRK08159 182 PKNIRVNAISAGPIKTLAASGIG----DF----RYILKWNEYNA------P--LRRTVTIEEVGDSALYLLSDLSR---G 242 (272)
T ss_pred ccCeEEEEeecCCcCCHHHhcCC----cc----hHHHHHHHhCC------c--ccccCCHHHHHHHHHHHhCcccc---C
Confidence 5799999999977543211100 00 00001100000 0 11246779999999888764322 1
Q ss_pred CCCcEEEeecC
Q psy7538 321 ERKSVCNLTSN 331 (543)
Q Consensus 321 ~~~~vyni~s~ 331 (543)
..+.++.+.++
T Consensus 243 itG~~i~vdgG 253 (272)
T PRK08159 243 VTGEVHHVDSG 253 (272)
T ss_pred ccceEEEECCC
Confidence 24667776665
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=4.6e-11 Score=118.60 Aligned_cols=222 Identities=14% Similarity=0.094 Sum_probs=140.6
Q ss_pred hcCCCEEEEEcCcc--hhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEE
Q psy7538 27 TYENKSIFLSGGSG--FLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVIS 104 (543)
Q Consensus 27 ~~~~~~VlITGatG--FiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~ 104 (543)
+++||+++||||++ -||+++++.|++.|+ +|++..|+.+ .++.++++.. ...++.++.
T Consensus 3 ~l~~k~~lITGas~~~GIG~aia~~la~~G~---~vil~~r~~~---~~~~~~~~~~--------------~~~~~~~~~ 62 (262)
T PRK07984 3 FLSGKRILVTGVASKLSIAYGIAQAMHREGA---ELAFTYQNDK---LKGRVEEFAA--------------QLGSDIVLP 62 (262)
T ss_pred ccCCCEEEEeCCCCCccHHHHHHHHHHHCCC---EEEEEecchh---HHHHHHHHHh--------------ccCCceEee
Confidence 46889999999985 899999999999987 6777777521 2233333211 112456788
Q ss_pred ccCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC------------cccHHHHHHHHHHHHHHHHHHHHhc-c
Q psy7538 105 GDITQLKLGISEIDKKELID-------NVDIVYHVAATIRF------------DEPIKTAVILNTRGTRDMLELSKQM-K 164 (543)
Q Consensus 105 gDl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~------------~~~~~~~~~~Nv~gt~~ll~~a~~~-~ 164 (543)
+|+++++ +++.+++ .+|++||+||.... .+.++..+++|+.|...+.+++..+ .
T Consensus 63 ~Dl~~~~------~v~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 136 (262)
T PRK07984 63 CDVAEDA------SIDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN 136 (262)
T ss_pred cCCCCHH------HHHHHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhc
Confidence 9999876 5655543 48999999986421 1234567899999988888877543 1
Q ss_pred CCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh---
Q psy7538 165 NLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME--- 241 (543)
Q Consensus 165 ~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~--- 241 (543)
+-.++|++||..+.... | ....|+.||+..+.+.+..+.
T Consensus 137 ~~g~Iv~iss~~~~~~~----------~----------------------------~~~~Y~asKaal~~l~~~la~el~ 178 (262)
T PRK07984 137 PGSALLTLSYLGAERAI----------P----------------------------NYNVMGLAKASLEANVRYMANAMG 178 (262)
T ss_pred CCcEEEEEecCCCCCCC----------C----------------------------CcchhHHHHHHHHHHHHHHHHHhc
Confidence 12579999987542110 0 015899999999999887655
Q ss_pred -cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCC
Q psy7538 242 -LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKES 320 (543)
Q Consensus 242 -~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~ 320 (543)
+++.+..+-|+.|-.+... ++ ............. ....-+...+|++++++.++..... .
T Consensus 179 ~~gIrVn~i~PG~v~T~~~~---~~----~~~~~~~~~~~~~---------~p~~r~~~pedva~~~~~L~s~~~~---~ 239 (262)
T PRK07984 179 PEGVRVNAISAGPIRTLAAS---GI----KDFRKMLAHCEAV---------TPIRRTVTIEDVGNSAAFLCSDLSA---G 239 (262)
T ss_pred ccCcEEeeeecCcccchHHh---cC----CchHHHHHHHHHc---------CCCcCCCCHHHHHHHHHHHcCcccc---c
Confidence 5799999999877443111 00 0000111111110 0112356779999999888765322 1
Q ss_pred CCCcEEEeecC
Q psy7538 321 ERKSVCNLTSN 331 (543)
Q Consensus 321 ~~~~vyni~s~ 331 (543)
..+.+..+.++
T Consensus 240 itG~~i~vdgg 250 (262)
T PRK07984 240 ISGEVVHVDGG 250 (262)
T ss_pred ccCcEEEECCC
Confidence 24666666554
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=3.5e-11 Score=120.10 Aligned_cols=221 Identities=11% Similarity=0.103 Sum_probs=139.6
Q ss_pred cCCCEEEEEcCcc--hhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 28 YENKSIFLSGGSG--FLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 28 ~~~~~VlITGatG--FiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
+++|+++||||++ -||+.++++|++.|. +|.+..|+.. ..++++++.+ + . .....+.+
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga---~V~~~~r~~~---~~~~~~~~~~---------~----~-g~~~~~~~ 64 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGA---ELAFTYQGEA---LGKRVKPLAE---------S----L-GSDFVLPC 64 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCCC---EEEEecCchH---HHHHHHHHHH---------h----c-CCceEEeC
Confidence 5789999999996 899999999999997 6777777531 1233333211 0 0 12246889
Q ss_pred cCCCCCCCCCHHHHHHHh-------cCccEEEEcCccCCC-----------cccHHHHHHHHHHHHHHHHHHHHh-ccCC
Q psy7538 106 DITQLKLGISEIDKKELI-------DNVDIVYHVAATIRF-----------DEPIKTAVILNTRGTRDMLELSKQ-MKNL 166 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~-----------~~~~~~~~~~Nv~gt~~ll~~a~~-~~~l 166 (543)
|+++++ +++.++ ..+|++||+||.... .+.++..+++|+.|+.++++++.. +..-
T Consensus 65 Dv~d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~ 138 (271)
T PRK06505 65 DVEDIA------SVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDG 138 (271)
T ss_pred CCCCHH------HHHHHHHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccC
Confidence 999875 555443 358999999996421 134566789999999998887653 3222
Q ss_pred ceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----c
Q psy7538 167 KCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----L 242 (543)
Q Consensus 167 ~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~ 242 (543)
.++|++||..+.... | ....|+.||+..+.+.+..+. +
T Consensus 139 G~Iv~isS~~~~~~~----------~----------------------------~~~~Y~asKaAl~~l~r~la~el~~~ 180 (271)
T PRK06505 139 GSMLTLTYGGSTRVM----------P----------------------------NYNVMGVAKAALEASVRYLAADYGPQ 180 (271)
T ss_pred ceEEEEcCCCccccC----------C----------------------------ccchhhhhHHHHHHHHHHHHHHHhhc
Confidence 589999987543210 0 015799999999888877654 5
Q ss_pred CCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCC
Q psy7538 243 GMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322 (543)
Q Consensus 243 ~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~ 322 (543)
|+.+..+.|+.|-.+..+. ............... + ..-+...+|+|++++.++..... -..
T Consensus 181 gIrVn~v~PG~i~T~~~~~-------~~~~~~~~~~~~~~~-------p--~~r~~~peeva~~~~fL~s~~~~---~it 241 (271)
T PRK06505 181 GIRVNAISAGPVRTLAGAG-------IGDARAIFSYQQRNS-------P--LRRTVTIDEVGGSALYLLSDLSS---GVT 241 (271)
T ss_pred CeEEEEEecCCcccccccc-------CcchHHHHHHHhhcC-------C--ccccCCHHHHHHHHHHHhCcccc---ccC
Confidence 8999999999885542211 000111111111111 0 11234579999999887754322 124
Q ss_pred CcEEEeecC
Q psy7538 323 KSVCNLTSN 331 (543)
Q Consensus 323 ~~vyni~s~ 331 (543)
+.+..+.++
T Consensus 242 G~~i~vdgG 250 (271)
T PRK06505 242 GEIHFVDSG 250 (271)
T ss_pred ceEEeecCC
Confidence 666666554
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=6.6e-11 Score=118.28 Aligned_cols=221 Identities=11% Similarity=0.075 Sum_probs=139.6
Q ss_pred cCCCEEEEEcCc--chhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 28 YENKSIFLSGGS--GFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 28 ~~~~~VlITGat--GFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
+++|+++||||+ +-||..++++|++.|. +|++..|+.. ..++++++.+ +. ..+ ..+.+
T Consensus 3 l~~k~~lItGas~~~GIG~aiA~~la~~G~---~Vil~~r~~~---~~~~~~~~~~---------~~----~~~-~~~~~ 62 (274)
T PRK08415 3 MKGKKGLIVGVANNKSIAYGIAKACFEQGA---ELAFTYLNEA---LKKRVEPIAQ---------EL----GSD-YVYEL 62 (274)
T ss_pred cCCcEEEEECCCCCCCHHHHHHHHHHHCCC---EEEEEecCHH---HHHHHHHHHH---------hc----CCc-eEEEe
Confidence 468999999997 7899999999999987 7777777631 1234433311 11 112 56889
Q ss_pred cCCCCCCCCCHHHHHHHh-------cCccEEEEcCccCC-------C----cccHHHHHHHHHHHHHHHHHHHHh-ccCC
Q psy7538 106 DITQLKLGISEIDKKELI-------DNVDIVYHVAATIR-------F----DEPIKTAVILNTRGTRDMLELSKQ-MKNL 166 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~-------~----~~~~~~~~~~Nv~gt~~ll~~a~~-~~~l 166 (543)
|+++++ +++.++ ..+|++||+||... + .+.++..+++|+.|+..+.+++.. +..-
T Consensus 63 Dv~d~~------~v~~~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~ 136 (274)
T PRK08415 63 DVSKPE------HFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG 136 (274)
T ss_pred cCCCHH------HHHHHHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC
Confidence 999976 454443 35899999999642 1 134566899999999998887764 2222
Q ss_pred ceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----c
Q psy7538 167 KCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----L 242 (543)
Q Consensus 167 ~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~ 242 (543)
.++|++||..+.... | ....|+.||+..+.+.+..+. +
T Consensus 137 g~Iv~isS~~~~~~~----------~----------------------------~~~~Y~asKaal~~l~~~la~el~~~ 178 (274)
T PRK08415 137 ASVLTLSYLGGVKYV----------P----------------------------HYNVMGVAKAALESSVRYLAVDLGKK 178 (274)
T ss_pred CcEEEEecCCCccCC----------C----------------------------cchhhhhHHHHHHHHHHHHHHHhhhc
Confidence 589999987543211 0 015799999999888877654 5
Q ss_pred CCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCC
Q psy7538 243 GMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322 (543)
Q Consensus 243 ~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~ 322 (543)
|+.+..+.|+.|-.+..... ............. .+ ..-+...+|++++++.++..... . ..
T Consensus 179 gIrVn~v~PG~v~T~~~~~~--------~~~~~~~~~~~~~---~p-----l~r~~~pedva~~v~fL~s~~~~-~--it 239 (274)
T PRK08415 179 GIRVNAISAGPIKTLAASGI--------GDFRMILKWNEIN---AP-----LKKNVSIEEVGNSGMYLLSDLSS-G--VT 239 (274)
T ss_pred CeEEEEEecCccccHHHhcc--------chhhHHhhhhhhh---Cc-----hhccCCHHHHHHHHHHHhhhhhh-c--cc
Confidence 78999999987754321100 0000000000000 00 11245679999999887764322 1 24
Q ss_pred CcEEEeecC
Q psy7538 323 KSVCNLTSN 331 (543)
Q Consensus 323 ~~vyni~s~ 331 (543)
+.+..+.++
T Consensus 240 G~~i~vdGG 248 (274)
T PRK08415 240 GEIHYVDAG 248 (274)
T ss_pred ccEEEEcCc
Confidence 666666554
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=5.5e-11 Score=117.94 Aligned_cols=222 Identities=12% Similarity=0.059 Sum_probs=140.4
Q ss_pred hcCCCEEEEEcC--cchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEE
Q psy7538 27 TYENKSIFLSGG--SGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVIS 104 (543)
Q Consensus 27 ~~~~~~VlITGa--tGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~ 104 (543)
++++|+++|||| ++-||++++++|++.|. +|++..|... ..++++++.+ +. .....+.
T Consensus 3 ~l~~k~vlItGas~~~GIG~a~a~~l~~~G~---~v~~~~~~~~---~~~~~~~~~~---------~~-----~~~~~~~ 62 (260)
T PRK06997 3 FLAGKRILITGLLSNRSIAYGIAKACKREGA---ELAFTYVGDR---FKDRITEFAA---------EF-----GSDLVFP 62 (260)
T ss_pred ccCCcEEEEeCCCCCCcHHHHHHHHHHHCCC---eEEEEccchH---HHHHHHHHHH---------hc-----CCcceee
Confidence 467899999996 67899999999999987 6766655422 1334433211 10 1224678
Q ss_pred ccCCCCCCCCCHHHHHHHh-------cCccEEEEcCccCCC------------cccHHHHHHHHHHHHHHHHHHHHhc-c
Q psy7538 105 GDITQLKLGISEIDKKELI-------DNVDIVYHVAATIRF------------DEPIKTAVILNTRGTRDMLELSKQM-K 164 (543)
Q Consensus 105 gDl~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~------------~~~~~~~~~~Nv~gt~~ll~~a~~~-~ 164 (543)
+|+++++ +++.++ ..+|++||+|+.... .+.++..+++|+.|+..+.+++... +
T Consensus 63 ~Dv~d~~------~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~ 136 (260)
T PRK06997 63 CDVASDE------QIDALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLS 136 (260)
T ss_pred ccCCCHH------HHHHHHHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcC
Confidence 9999886 555554 358999999986421 1345567899999999988887642 2
Q ss_pred CCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh---
Q psy7538 165 NLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME--- 241 (543)
Q Consensus 165 ~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~--- 241 (543)
+-.++|++||..+.... | ....|+.||+..+.+.+..+.
T Consensus 137 ~~g~Ii~iss~~~~~~~----------~----------------------------~~~~Y~asKaal~~l~~~la~el~ 178 (260)
T PRK06997 137 DDASLLTLSYLGAERVV----------P----------------------------NYNTMGLAKASLEASVRYLAVSLG 178 (260)
T ss_pred CCceEEEEeccccccCC----------C----------------------------CcchHHHHHHHHHHHHHHHHHHhc
Confidence 23589999987542210 0 016799999999988877654
Q ss_pred -cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCC
Q psy7538 242 -LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKES 320 (543)
Q Consensus 242 -~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~ 320 (543)
+++.+..+.|+.|-.+... .+ +. ............ + ..-+...+|+++++..++..... -
T Consensus 179 ~~gIrVn~i~PG~v~T~~~~---~~-~~---~~~~~~~~~~~~-------p--~~r~~~pedva~~~~~l~s~~~~---~ 239 (260)
T PRK06997 179 PKGIRANGISAGPIKTLAAS---GI-KD---FGKILDFVESNA-------P--LRRNVTIEEVGNVAAFLLSDLAS---G 239 (260)
T ss_pred ccCeEEEEEeeCccccchhc---cc-cc---hhhHHHHHHhcC-------c--ccccCCHHHHHHHHHHHhCcccc---C
Confidence 5799999999877443111 00 00 011111111100 1 12356789999999888765322 1
Q ss_pred CCCcEEEeecC
Q psy7538 321 ERKSVCNLTSN 331 (543)
Q Consensus 321 ~~~~vyni~s~ 331 (543)
..+.++.+.++
T Consensus 240 itG~~i~vdgg 250 (260)
T PRK06997 240 VTGEITHVDSG 250 (260)
T ss_pred cceeEEEEcCC
Confidence 24666666554
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=99.29 E-value=3.3e-11 Score=110.72 Aligned_cols=150 Identities=20% Similarity=0.260 Sum_probs=112.8
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+++||||+|-||+.++++|+++|- ..|+++.|+ ...++.+++ .+.++ ....++.++.+|++++
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~--~~v~~~~r~----~~~~~~~~l-----~~~l~-----~~~~~~~~~~~D~~~~ 64 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGA--RVVILTSRS----EDSEGAQEL-----IQELK-----APGAKITFIECDLSDP 64 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTT--EEEEEEESS----CHHHHHHHH-----HHHHH-----HTTSEEEEEESETTSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCc--eEEEEeeec----ccccccccc-----ccccc-----cccccccccccccccc
Confidence 6899999999999999999999953 478888887 223344333 22222 1227899999999987
Q ss_pred CCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCc
Q psy7538 111 KLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAY 176 (543)
Q Consensus 111 ~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y 176 (543)
+ +++.+++ .+|++||+|+.... .+.++..+++|+.+...+.+++.. .+-.++|++||..
T Consensus 65 ~------~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~g~iv~~sS~~ 137 (167)
T PF00106_consen 65 E------SIRALIEEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP-QGGGKIVNISSIA 137 (167)
T ss_dssp H------HHHHHHHHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH-HTTEEEEEEEEGG
T ss_pred c------cccccccccccccccccccccccccccccccccccchhhhhccccccceeeeeeehhee-ccccceEEecchh
Confidence 5 5665543 58999999998752 244667899999999999999988 4678999999986
Q ss_pred cccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh
Q psy7538 177 CHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME 241 (543)
Q Consensus 177 ~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~ 241 (543)
+..... . -..|+.+|+..+.+.+..+.
T Consensus 138 ~~~~~~----------~----------------------------~~~Y~askaal~~~~~~la~ 164 (167)
T PF00106_consen 138 GVRGSP----------G----------------------------MSAYSASKAALRGLTQSLAA 164 (167)
T ss_dssp GTSSST----------T----------------------------BHHHHHHHHHHHHHHHHHHH
T ss_pred hccCCC----------C----------------------------ChhHHHHHHHHHHHHHHHHH
Confidence 643211 1 15899999999999887654
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.29 E-value=6e-11 Score=129.55 Aligned_cols=164 Identities=13% Similarity=0.171 Sum_probs=119.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
.++|+++||||+|.||+.++++|++.|+ +|+++.|+. ++++++. .....++.++.+|+
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G~---~V~~~~r~~------~~~~~~~-------------~~~~~~~~~~~~D~ 60 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAGD---QVVVADRNV------ERARERA-------------DSLGPDHHALAMDV 60 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHH-------------HHhCCceeEEEecc
Confidence 3689999999999999999999999986 788888864 2332221 11123567889999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCC-----C----cccHHHHHHHHHHHHHHHHHHHHhc---cCC-c
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIR-----F----DEPIKTAVILNTRGTRDMLELSKQM---KNL-K 167 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~-----~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l-~ 167 (543)
++++ +++.+++ .+|++||+||... + .+.++..+++|+.|+..+++++... .+- .
T Consensus 61 ~~~~------~~~~~~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ 134 (520)
T PRK06484 61 SDEA------QIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGA 134 (520)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCC
Confidence 9876 5555443 5899999998631 1 2346678999999999998888653 122 3
Q ss_pred eEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cC
Q psy7538 168 CFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LG 243 (543)
Q Consensus 168 ~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~ 243 (543)
++|++||..+..... ....|+.+|+..+.+++..+. .+
T Consensus 135 ~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaal~~l~~~la~e~~~~~ 176 (520)
T PRK06484 135 AIVNVASGAGLVALP--------------------------------------KRTAYSASKAAVISLTRSLACEWAAKG 176 (520)
T ss_pred eEEEECCcccCCCCC--------------------------------------CCchHHHHHHHHHHHHHHHHHHhhhhC
Confidence 899999985532211 016899999999998876554 47
Q ss_pred CcEEEEecCeeeec
Q psy7538 244 MPCMILRPSIVVPI 257 (543)
Q Consensus 244 lp~~IlRps~V~G~ 257 (543)
+.++.+.|+.|-.+
T Consensus 177 i~v~~i~Pg~v~t~ 190 (520)
T PRK06484 177 IRVNAVLPGYVRTQ 190 (520)
T ss_pred eEEEEEccCCcCch
Confidence 99999999977444
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=4.8e-10 Score=110.89 Aligned_cols=221 Identities=14% Similarity=0.103 Sum_probs=137.9
Q ss_pred cCCCEEEEEcC--cchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 28 YENKSIFLSGG--SGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 28 ~~~~~VlITGa--tGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
+++|+++|||| ++-||.+++++|++.|. +|++..|+... +.++++ ..+ ...++.++.+
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~---~v~l~~r~~~~----~~~~~~---------~~~----~~~~~~~~~~ 64 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQEQGA---EVVLTGFGRAL----RLTERI---------AKR----LPEPAPVLEL 64 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHHHCCC---EEEEecCccch----hHHHHH---------HHh----cCCCCcEEeC
Confidence 57899999999 89999999999999986 78888875421 112221 111 1125678899
Q ss_pred cCCCCCCCCCHHHHHHHh-------cCccEEEEcCccCC-------C-c---ccHHHHHHHHHHHHHHHHHHHHh-ccCC
Q psy7538 106 DITQLKLGISEIDKKELI-------DNVDIVYHVAATIR-------F-D---EPIKTAVILNTRGTRDMLELSKQ-MKNL 166 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~-------~-~---~~~~~~~~~Nv~gt~~ll~~a~~-~~~l 166 (543)
|+++++ +++.++ .++|++||+||... + + +.+...+++|+.|+..+.+.+.. +..-
T Consensus 65 Dv~~~~------~i~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~ 138 (256)
T PRK07889 65 DVTNEE------HLASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEG 138 (256)
T ss_pred CCCCHH------HHHHHHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccC
Confidence 999875 454443 35899999998652 1 1 23455789999999988887754 2222
Q ss_pred ceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----c
Q psy7538 167 KCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----L 242 (543)
Q Consensus 167 ~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~ 242 (543)
.++|++|+....+ .|. ...|+.||+..+.+.+..+. +
T Consensus 139 g~Iv~is~~~~~~-----------~~~----------------------------~~~Y~asKaal~~l~~~la~el~~~ 179 (256)
T PRK07889 139 GSIVGLDFDATVA-----------WPA----------------------------YDWMGVAKAALESTNRYLARDLGPR 179 (256)
T ss_pred ceEEEEeeccccc-----------CCc----------------------------cchhHHHHHHHHHHHHHHHHHhhhc
Confidence 4788887542110 000 05789999999888876544 5
Q ss_pred CCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCC
Q psy7538 243 GMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322 (543)
Q Consensus 243 ~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~ 322 (543)
|+.+..+.|+.|-.+..+..++ ............ + ....+...+|+|++++.++..... ...
T Consensus 180 gIrvn~v~PG~v~T~~~~~~~~-------~~~~~~~~~~~~----p----~~~~~~~p~evA~~v~~l~s~~~~---~~t 241 (256)
T PRK07889 180 GIRVNLVAAGPIRTLAAKAIPG-------FELLEEGWDERA----P----LGWDVKDPTPVARAVVALLSDWFP---ATT 241 (256)
T ss_pred CeEEEeeccCcccChhhhcccC-------cHHHHHHHHhcC----c----cccccCCHHHHHHHHHHHhCcccc---ccc
Confidence 8999999999885543221111 011111111110 0 011356789999999988765322 124
Q ss_pred CcEEEeecC
Q psy7538 323 KSVCNLTSN 331 (543)
Q Consensus 323 ~~vyni~s~ 331 (543)
++++.+.++
T Consensus 242 G~~i~vdgg 250 (256)
T PRK07889 242 GEIVHVDGG 250 (256)
T ss_pred ceEEEEcCc
Confidence 666666543
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=99.28 E-value=8.3e-11 Score=116.24 Aligned_cols=164 Identities=12% Similarity=0.101 Sum_probs=111.7
Q ss_pred EEEEEcCcchhHHHHHHHHHh----hCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 32 SIFLSGGSGFLGKVLIEKILR----LEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 32 ~VlITGatGFiG~~Lv~~Ll~----~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
.++||||+|.||.+++++|.+ .|. +|+++.|+.. +++++. +.++.. ....++.++.+|+
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~---~V~~~~r~~~------~~~~~~-----~~l~~~---~~~~~v~~~~~Dl 64 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGS---VLVLSARNDE------ALRQLK-----AEIGAE---RSGLRVVRVSLDL 64 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCc---EEEEEEcCHH------HHHHHH-----HHHHhc---CCCceEEEEEecc
Confidence 589999999999999999997 564 7888888642 222211 112111 1123688899999
Q ss_pred CCCCCCCCHHHHHHHhcC-----------ccEEEEcCccCC-----Cc-----ccHHHHHHHHHHHHHHHHHHHHhc---
Q psy7538 108 TQLKLGISEIDKKELIDN-----------VDIVYHVAATIR-----FD-----EPIKTAVILNTRGTRDMLELSKQM--- 163 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~-----------vd~ViH~AA~v~-----~~-----~~~~~~~~~Nv~gt~~ll~~a~~~--- 163 (543)
++++ +++.+++. .|++||+||... +. +.++..+++|+.|+..+.+.+...
T Consensus 65 ~~~~------~v~~~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~ 138 (256)
T TIGR01500 65 GAEA------GLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKD 138 (256)
T ss_pred CCHH------HHHHHHHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhh
Confidence 9875 55554431 259999998632 11 345668999999988887766542
Q ss_pred -cC-CceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh
Q psy7538 164 -KN-LKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME 241 (543)
Q Consensus 164 -~~-l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~ 241 (543)
++ -.++|++||..+.... |. ...|+.||+..+.+.+..+.
T Consensus 139 ~~~~~~~iv~isS~~~~~~~----------~~----------------------------~~~Y~asKaal~~l~~~la~ 180 (256)
T TIGR01500 139 SPGLNRTVVNISSLCAIQPF----------KG----------------------------WALYCAGKAARDMLFQVLAL 180 (256)
T ss_pred cCCCCCEEEEECCHHhCCCC----------CC----------------------------chHHHHHHHHHHHHHHHHHH
Confidence 11 2579999998553211 00 15799999999999887654
Q ss_pred ----cCCcEEEEecCeeee
Q psy7538 242 ----LGMPCMILRPSIVVP 256 (543)
Q Consensus 242 ----~~lp~~IlRps~V~G 256 (543)
.++.+..+.|+.|-.
T Consensus 181 e~~~~~i~v~~v~PG~v~T 199 (256)
T TIGR01500 181 EEKNPNVRVLNYAPGVLDT 199 (256)
T ss_pred HhcCCCeEEEEecCCcccc
Confidence 478889999987743
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >KOG1203|consensus | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.4e-10 Score=118.76 Aligned_cols=231 Identities=17% Similarity=0.120 Sum_probs=135.0
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
.+.++|||+||||-+|+-+++.|+++|+ .|++++|+..+. ++++. + .........+..|.
T Consensus 77 ~~~~~VlVvGatG~vG~~iv~~llkrgf---~vra~VRd~~~a------~~~~~--~---------~~~d~~~~~v~~~~ 136 (411)
T KOG1203|consen 77 KKPTTVLVVGATGKVGRRIVKILLKRGF---SVRALVRDEQKA------EDLLG--V---------FFVDLGLQNVEADV 136 (411)
T ss_pred CCCCeEEEecCCCchhHHHHHHHHHCCC---eeeeeccChhhh------hhhhc--c---------cccccccceeeecc
Confidence 4567999999999999999999999996 899999986432 12211 0 11223445555555
Q ss_pred CCCCCCCCHHHHHHHhcC----ccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCc
Q psy7538 108 TQLKLGISEIDKKELIDN----VDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKV 183 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~----vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~ 183 (543)
..+. +....+.+. ..+++-|++...-.++...-.++...|+.+++++|+.+ ++++||++|+..+.....+
T Consensus 137 ~~~~-----d~~~~~~~~~~~~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~a-Gvk~~vlv~si~~~~~~~~ 210 (411)
T KOG1203|consen 137 VTAI-----DILKKLVEAVPKGVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKA-GVKRVVLVGSIGGTKFNQP 210 (411)
T ss_pred cccc-----chhhhhhhhccccceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHh-CCceEEEEEeecCcccCCC
Confidence 4433 133444443 34555555543322212234567889999999999998 9999999988755432211
Q ss_pred ccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCC
Q psy7538 184 LEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLP 263 (543)
Q Consensus 184 i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~ 263 (543)
. ... .. -..+-..|..+|+.+.+. |++++|+||+.-.-
T Consensus 211 ~------~~~-------------------------~~-~~~~~~~k~~~e~~~~~S---gl~ytiIR~g~~~~------- 248 (411)
T KOG1203|consen 211 P------NIL-------------------------LL-NGLVLKAKLKAEKFLQDS---GLPYTIIRPGGLEQ------- 248 (411)
T ss_pred c------hhh-------------------------hh-hhhhhHHHHhHHHHHHhc---CCCcEEEecccccc-------
Confidence 0 000 00 023447888999988866 99999999984311
Q ss_pred CCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHH
Q psy7538 264 GWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQ 339 (543)
Q Consensus 264 gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~ 339 (543)
+.-+ .. .......... ...+...-.|+-.++|+.++.++..... . ...+..+++....|-++-
T Consensus 249 ----~~~~-~~--~~~~~~~~~~--~~~~~~~~~i~r~~vael~~~all~~~~-~---~~k~~~~v~~~~gpg~~~ 311 (411)
T KOG1203|consen 249 ----DTGG-QR--EVVVDDEKEL--LTVDGGAYSISRLDVAELVAKALLNEAA-T---FKKVVELVLKPEGPGRPY 311 (411)
T ss_pred ----CCCC-cc--eecccCcccc--ccccccceeeehhhHHHHHHHHHhhhhh-c---cceeEEeecCCCCCCccH
Confidence 1000 00 0000011111 1112222467888999998888877765 1 223445554433343333
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.25 E-value=2.4e-10 Score=116.56 Aligned_cols=195 Identities=14% Similarity=0.113 Sum_probs=115.5
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhC-CCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLE-PNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g-~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
.+++++||||||.||.+++++|++.| + +|+++.|+.. +.+++. +.+ .....++..+.+|+
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~---~V~l~~r~~~------~~~~~~-----~~l-----~~~~~~~~~~~~Dl 62 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEW---HVIMACRDFL------KAEQAA-----KSL-----GMPKDSYTIMHLDL 62 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCC---EEEEEeCCHH------HHHHHH-----HHh-----cCCCCeEEEEEcCC
Confidence 36899999999999999999999998 5 7888888642 222211 111 11124677889999
Q ss_pred CCCCCCCCHHHHHHHh-------cCccEEEEcCccCCC--------cccHHHHHHHHHHHHHHHHHHHHh----cc-CCc
Q psy7538 108 TQLKLGISEIDKKELI-------DNVDIVYHVAATIRF--------DEPIKTAVILNTRGTRDMLELSKQ----MK-NLK 167 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~l~ 167 (543)
++++ +++.++ .++|++||+||.... .+.++..+++|+.|+..+.+++.. .+ +-.
T Consensus 63 ~~~~------~v~~~~~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g 136 (314)
T TIGR01289 63 GSLD------SVRQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDK 136 (314)
T ss_pred CCHH------HHHHHHHHHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCC
Confidence 9875 444333 358999999996421 134566799999998888666543 21 136
Q ss_pred eEEEEecCccccCC--CcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----
Q psy7538 168 CFTYISTAYCHPSE--KVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME---- 241 (543)
Q Consensus 168 ~~V~vST~y~~~~~--~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~---- 241 (543)
++|++||..++... ..+. ++.+..++.......... .......- ......|+.||+....+......
T Consensus 137 ~IV~vsS~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~Y~~SK~a~~~~~~~la~~~~~ 209 (314)
T TIGR01289 137 RLIIVGSITGNTNTLAGNVP-----PKANLGDLSGLAAGFKAP-IAMIDGKE-FKGAKAYKDSKVCNMLTVRELHRRFHD 209 (314)
T ss_pred eEEEEecCccccccCCCcCC-----CcccccccccccccCCCc-ccccCCCC-cchhhhHHHhHHHHHHHHHHHHHHhcc
Confidence 99999998654321 0000 000000000000000000 00000000 01115799999997776655533
Q ss_pred -cCCcEEEEecCeee
Q psy7538 242 -LGMPCMILRPSIVV 255 (543)
Q Consensus 242 -~~lp~~IlRps~V~ 255 (543)
.++.++.++||.|.
T Consensus 210 ~~gi~v~~v~PG~v~ 224 (314)
T TIGR01289 210 ETGITFASLYPGCIA 224 (314)
T ss_pred CCCeEEEEecCCccc
Confidence 36888999999884
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.3e-10 Score=115.14 Aligned_cols=222 Identities=10% Similarity=0.066 Sum_probs=139.2
Q ss_pred hcCCCEEEEEcCcc--hhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEE
Q psy7538 27 TYENKSIFLSGGSG--FLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVIS 104 (543)
Q Consensus 27 ~~~~~~VlITGatG--FiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~ 104 (543)
.++||+++||||++ -||+++++.|.+.|. +|++..|+.+ .++.++++.+ +. ....++.
T Consensus 5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~---~v~~~~r~~~---~~~~~~~l~~---------~~-----g~~~~~~ 64 (260)
T PRK06603 5 LLQGKKGLITGIANNMSISWAIAQLAKKHGA---ELWFTYQSEV---LEKRVKPLAE---------EI-----GCNFVSE 64 (260)
T ss_pred ccCCcEEEEECCCCCcchHHHHHHHHHHcCC---EEEEEeCchH---HHHHHHHHHH---------hc-----CCceEEE
Confidence 45789999999997 799999999999986 6777766521 2233333311 10 1223578
Q ss_pred ccCCCCCCCCCHHHHHHHh-------cCccEEEEcCccCC-------C----cccHHHHHHHHHHHHHHHHHHHHh-ccC
Q psy7538 105 GDITQLKLGISEIDKKELI-------DNVDIVYHVAATIR-------F----DEPIKTAVILNTRGTRDMLELSKQ-MKN 165 (543)
Q Consensus 105 gDl~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~-------~----~~~~~~~~~~Nv~gt~~ll~~a~~-~~~ 165 (543)
+|+++++ +++.++ ..+|++||+|+... + .+.++..+++|+.|...+++.+.. +..
T Consensus 65 ~Dv~~~~------~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~ 138 (260)
T PRK06603 65 LDVTNPK------SISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD 138 (260)
T ss_pred ccCCCHH------HHHHHHHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 9999976 555444 35899999998642 1 134566899999999998887643 322
Q ss_pred CceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----
Q psy7538 166 LKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME---- 241 (543)
Q Consensus 166 l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~---- 241 (543)
-.++|++||..+.... | ....|+.||+..+.+.+..+.
T Consensus 139 ~G~Iv~isS~~~~~~~----------~----------------------------~~~~Y~asKaal~~l~~~la~el~~ 180 (260)
T PRK06603 139 GGSIVTLTYYGAEKVI----------P----------------------------NYNVMGVAKAALEASVKYLANDMGE 180 (260)
T ss_pred CceEEEEecCccccCC----------C----------------------------cccchhhHHHHHHHHHHHHHHHhhh
Confidence 2589999986442110 0 015899999999988877654
Q ss_pred cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCC
Q psy7538 242 LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESE 321 (543)
Q Consensus 242 ~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~ 321 (543)
+++.+..+.|+.|-.+.....+ ............. + ...+...+|++++++.++..... -.
T Consensus 181 ~gIrVn~v~PG~v~T~~~~~~~-------~~~~~~~~~~~~~-------p--~~r~~~pedva~~~~~L~s~~~~---~i 241 (260)
T PRK06603 181 NNIRVNAISAGPIKTLASSAIG-------DFSTMLKSHAATA-------P--LKRNTTQEDVGGAAVYLFSELSK---GV 241 (260)
T ss_pred cCeEEEEEecCcCcchhhhcCC-------CcHHHHHHHHhcC-------C--cCCCCCHHHHHHHHHHHhCcccc---cC
Confidence 5799999999987543211100 0011111111110 1 12245679999999888764332 12
Q ss_pred CCcEEEeecC
Q psy7538 322 RKSVCNLTSN 331 (543)
Q Consensus 322 ~~~vyni~s~ 331 (543)
.+..+.+.++
T Consensus 242 tG~~i~vdgG 251 (260)
T PRK06603 242 TGEIHYVDCG 251 (260)
T ss_pred cceEEEeCCc
Confidence 4556666544
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=3.8e-10 Score=114.51 Aligned_cols=174 Identities=11% Similarity=0.089 Sum_probs=114.5
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCC----HHHHHHHHhcCchhHHHHhhcCcCCCCceEEE
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKT----PNQRVEELFESPVFDALKTLRGKSILQKIQVI 103 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~----~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i 103 (543)
++||+++||||++.||++++++|++.|. +|++..|+..... ..+++++. -+.+. ....++.++
T Consensus 6 l~~k~~lITGgs~GIG~aia~~la~~G~---~Vv~~~r~~~~~~~~~~~~~~~~~~-----~~~l~-----~~~~~~~~~ 72 (305)
T PRK08303 6 LRGKVALVAGATRGAGRGIAVELGAAGA---TVYVTGRSTRARRSEYDRPETIEET-----AELVT-----AAGGRGIAV 72 (305)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEecccccccccccccchHHHH-----HHHHH-----hcCCceEEE
Confidence 5789999999999999999999999986 7888888743210 01222221 11111 112356789
Q ss_pred EccCCCCCCCCCHHHHHHHhc-------CccEEEEcC-ccC-------CC----cccHHHHHHHHHHHHHHHHHHHHhc-
Q psy7538 104 SGDITQLKLGISEIDKKELID-------NVDIVYHVA-ATI-------RF----DEPIKTAVILNTRGTRDMLELSKQM- 163 (543)
Q Consensus 104 ~gDl~~~~lgls~~~~~~l~~-------~vd~ViH~A-A~v-------~~----~~~~~~~~~~Nv~gt~~ll~~a~~~- 163 (543)
.+|+++++ +++.+++ .+|++||+| +.. .+ .+.+...+++|+.|+..+.+++...
T Consensus 73 ~~Dv~~~~------~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m 146 (305)
T PRK08303 73 QVDHLVPE------QVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLL 146 (305)
T ss_pred EcCCCCHH------HHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 99999875 5555443 589999999 632 11 1234557889999988887776542
Q ss_pred --cCCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh
Q psy7538 164 --KNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME 241 (543)
Q Consensus 164 --~~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~ 241 (543)
.+-.++|++||..+.....+ .+ .-..|+.||+..+.+.+..+.
T Consensus 147 ~~~~~g~IV~isS~~~~~~~~~-------~~----------------------------~~~~Y~asKaal~~lt~~La~ 191 (305)
T PRK08303 147 IRRPGGLVVEITDGTAEYNATH-------YR----------------------------LSVFYDLAKTSVNRLAFSLAH 191 (305)
T ss_pred hhCCCcEEEEECCccccccCcC-------CC----------------------------CcchhHHHHHHHHHHHHHHHH
Confidence 12358999998633111000 00 004799999999888876554
Q ss_pred ----cCCcEEEEecCeee
Q psy7538 242 ----LGMPCMILRPSIVV 255 (543)
Q Consensus 242 ----~~lp~~IlRps~V~ 255 (543)
.|+.+..+.|+.|-
T Consensus 192 el~~~gIrVn~v~PG~v~ 209 (305)
T PRK08303 192 ELAPHGATAVALTPGWLR 209 (305)
T ss_pred HhhhcCcEEEEecCCccc
Confidence 57889999988663
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.1e-09 Score=107.78 Aligned_cols=192 Identities=14% Similarity=0.135 Sum_probs=123.7
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+++||||++-||+.++++|.+ |. +|+++.|+.. +++++ -+.+++. ...++.++.+|++++
T Consensus 1 ~~vlItGas~GIG~aia~~l~~-g~---~Vil~~r~~~------~~~~~-----~~~l~~~----~~~~~~~~~~Dv~d~ 61 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLCH-GE---DVVLAARRPE------AAQGL-----ASDLRQR----GATSVHVLSFDAQDL 61 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHhC-CC---EEEEEeCCHH------HHHHH-----HHHHHhc----cCCceEEEEcccCCH
Confidence 6899999999999999999984 75 7888888642 23221 1112111 113577899999998
Q ss_pred CCCCCHHHHHHHh-------cCccEEEEcCccCCCc-------ccHHHHHHHHHHHHHHHHHHH----HhccCCceEEEE
Q psy7538 111 KLGISEIDKKELI-------DNVDIVYHVAATIRFD-------EPIKTAVILNTRGTRDMLELS----KQMKNLKCFTYI 172 (543)
Q Consensus 111 ~lgls~~~~~~l~-------~~vd~ViH~AA~v~~~-------~~~~~~~~~Nv~gt~~ll~~a----~~~~~l~~~V~v 172 (543)
+ +++.++ ..+|++||+||..... +...+..++|+.+...++..+ .+.+.-.++|++
T Consensus 62 ~------~v~~~~~~~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~i 135 (246)
T PRK05599 62 D------THRELVKQTQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAF 135 (246)
T ss_pred H------HHHHHHHHHHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 6 344332 3589999999975321 123345678888877665544 222113589999
Q ss_pred ecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEE
Q psy7538 173 STAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMI 248 (543)
Q Consensus 173 ST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~I 248 (543)
||..+..... ....|+.||+..+.+.+..+. .++.+..
T Consensus 136 sS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~ 177 (246)
T PRK05599 136 SSIAGWRARR--------------------------------------ANYVYGSTKAGLDAFCQGLADSLHGSHVRLII 177 (246)
T ss_pred eccccccCCc--------------------------------------CCcchhhHHHHHHHHHHHHHHHhcCCCceEEE
Confidence 9986542210 015899999988888776554 4788888
Q ss_pred EecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhh
Q psy7538 249 LRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDF 314 (543)
Q Consensus 249 lRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~ 314 (543)
+.|+.|..+... +.. +. .. ....+|+|++++.++...
T Consensus 178 v~PG~v~T~~~~---------------------~~~------~~-~~-~~~pe~~a~~~~~~~~~~ 214 (246)
T PRK05599 178 ARPGFVIGSMTT---------------------GMK------PA-PM-SVYPRDVAAAVVSAITSS 214 (246)
T ss_pred ecCCcccchhhc---------------------CCC------CC-CC-CCCHHHHHHHHHHHHhcC
Confidence 888877443110 000 00 00 246799999999888764
|
|
| >KOG4288|consensus | Back alignment and domain information |
|---|
Probab=99.24 E-value=7.8e-11 Score=109.32 Aligned_cols=210 Identities=16% Similarity=0.131 Sum_probs=146.6
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
..+++.|+.||.|.++++.-...++ .|-.|.|+...+. + ......+....||.-..
T Consensus 53 e~tlvlggnpfsgs~vlk~A~~vv~---svgilsen~~k~~-l--------------------~sw~~~vswh~gnsfss 108 (283)
T KOG4288|consen 53 EWTLVLGGNPFSGSEVLKNATNVVH---SVGILSENENKQT-L--------------------SSWPTYVSWHRGNSFSS 108 (283)
T ss_pred HHHhhhcCCCcchHHHHHHHHhhce---eeeEeecccCcch-h--------------------hCCCcccchhhcccccc
Confidence 4688999999999999999999887 6788888864221 0 23445677778887665
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCcccccccC
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYL 190 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i~E~~y~ 190 (543)
+ -++....++..++-+++-. .+...+.++|=....+-.++|.+. ++++|||+|..-...
T Consensus 109 n------~~k~~l~g~t~v~e~~ggf---gn~~~m~~ing~ani~a~kaa~~~-gv~~fvyISa~d~~~----------- 167 (283)
T KOG4288|consen 109 N------PNKLKLSGPTFVYEMMGGF---GNIILMDRINGTANINAVKAAAKA-GVPRFVYISAHDFGL----------- 167 (283)
T ss_pred C------cchhhhcCCcccHHHhcCc---cchHHHHHhccHhhHHHHHHHHHc-CCceEEEEEhhhcCC-----------
Confidence 5 2556667888888887653 334567788888888889999998 999999999872211
Q ss_pred CCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCCCCCCCCC
Q psy7538 191 PPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPGWTDNIN 270 (543)
Q Consensus 191 ~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~gw~d~~~ 270 (543)
+|. -|..|-.+|..||..+.... ++.-+|+|||.+||... +.|---.+.
T Consensus 168 ~~~---------------------------i~rGY~~gKR~AE~Ell~~~--~~rgiilRPGFiyg~R~--v~g~~~pL~ 216 (283)
T KOG4288|consen 168 PPL---------------------------IPRGYIEGKREAEAELLKKF--RFRGIILRPGFIYGTRN--VGGIKSPLH 216 (283)
T ss_pred CCc---------------------------cchhhhccchHHHHHHHHhc--CCCceeeccceeecccc--cCcccccHH
Confidence 111 12689999999998887655 57889999999999943 222111111
Q ss_pred chHHHHHHHhcCc---eeEEeecCCcccccchHHHHHHHHHHHhhhhcc
Q psy7538 271 GPTGLLIGAGKGV---IRSMYCKNTGMADFLPADVAINGVFLFTWDFLN 316 (543)
Q Consensus 271 g~~~~~~~~~~g~---~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~ 316 (543)
.....+..+.++. +..++.-+...+..|++++||.+.+.|+.++.-
T Consensus 217 ~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai~dp~f 265 (283)
T KOG4288|consen 217 TVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAIEDPDF 265 (283)
T ss_pred hhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhccCCCc
Confidence 1112233333333 223445567888999999999999998877653
|
|
| >KOG1201|consensus | Back alignment and domain information |
|---|
Probab=99.21 E-value=9.7e-10 Score=107.09 Aligned_cols=198 Identities=20% Similarity=0.230 Sum_probs=137.9
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
.+|+.||||||++-+|+.++.++.++|. ++.+-+..+++. +|-.+++ + .. .++....+|+
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~---~~vl~Din~~~~--~etv~~~------------~-~~--g~~~~y~cdi 95 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGA---KLVLWDINKQGN--EETVKEI------------R-KI--GEAKAYTCDI 95 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCC---eEEEEeccccch--HHHHHHH------------H-hc--CceeEEEecC
Confidence 4789999999999999999999999985 677777777653 2222211 1 11 2688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHH----HHHHHHhccCCceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRD----MLELSKQMKNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~----ll~~a~~~~~l~~~ 169 (543)
++.+ ++.++.+ ++|++++.||.+.. ++..+..+++|+.|... ++-...+. +-.++
T Consensus 96 s~~e------ei~~~a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~-~~GHI 168 (300)
T KOG1201|consen 96 SDRE------EIYRLAKKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLEN-NNGHI 168 (300)
T ss_pred CCHH------HHHHHHHHHHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhc-CCceE
Confidence 9986 5555543 58999999998743 45567789999998655 44444554 55799
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHh----h---c
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECM----E---L 242 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~----~---~ 242 (543)
|-++|..+....... ..|+.||..+.-.-+... . .
T Consensus 169 V~IaS~aG~~g~~gl--------------------------------------~~YcaSK~a~vGfhesL~~EL~~~~~~ 210 (300)
T KOG1201|consen 169 VTIASVAGLFGPAGL--------------------------------------ADYCASKFAAVGFHESLSMELRALGKD 210 (300)
T ss_pred EEehhhhcccCCccc--------------------------------------hhhhhhHHHHHHHHHHHHHHHHhcCCC
Confidence 999998665432211 589999998865554432 2 4
Q ss_pred CCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcc
Q psy7538 243 GMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLN 316 (543)
Q Consensus 243 ~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~ 316 (543)
|+..+.+.|+.+= ++++.. . ..-......+..+.||+.++.+......
T Consensus 211 ~IktTlv~P~~i~-----------------Tgmf~~--~-------~~~~~l~P~L~p~~va~~Iv~ai~~n~~ 258 (300)
T KOG1201|consen 211 GIKTTLVCPYFIN-----------------TGMFDG--A-------TPFPTLAPLLEPEYVAKRIVEAILTNQA 258 (300)
T ss_pred CeeEEEEeeeecc-----------------ccccCC--C-------CCCccccCCCCHHHHHHHHHHHHHcCCc
Confidence 6888888888652 122221 0 1123557788999999999999877654
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.21 E-value=3.9e-10 Score=105.48 Aligned_cols=159 Identities=18% Similarity=0.286 Sum_probs=111.1
Q ss_pred EEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC-CCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 32 SIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK-KGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 32 ~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~-~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
+++||||+|-||..+++.|.+++. .+|.++.|+. .....++.++++ + ....++.++.+|++++
T Consensus 2 tylitGG~gglg~~la~~La~~~~--~~~il~~r~~~~~~~~~~~i~~l---------~-----~~g~~v~~~~~Dv~d~ 65 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGA--RRLILLGRSGAPSAEAEAAIREL---------E-----SAGARVEYVQCDVTDP 65 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT---SEEEEEESSGGGSTTHHHHHHHH---------H-----HTT-EEEEEE--TTSH
T ss_pred EEEEECCccHHHHHHHHHHHHcCC--CEEEEeccCCCccHHHHHHHHHH---------H-----hCCCceeeeccCccCH
Confidence 689999999999999999999973 5999999993 333444444443 2 2235899999999998
Q ss_pred CCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCc
Q psy7538 111 KLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAY 176 (543)
Q Consensus 111 ~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y 176 (543)
+ ++.++++ .++.|||+|+.... .+.+...+..-+.|+.+|.++.... .++.||.+||..
T Consensus 66 ~------~v~~~~~~~~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~-~l~~~i~~SSis 138 (181)
T PF08659_consen 66 E------AVAAALAQLRQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENR-PLDFFILFSSIS 138 (181)
T ss_dssp H------HHHHHHHTSHTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTT-TTSEEEEEEEHH
T ss_pred H------HHHHHHHHHHhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcC-CCCeEEEECChh
Confidence 6 7777764 36899999987642 1335557888899999999999885 899999999985
Q ss_pred cc-cCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecC
Q psy7538 177 CH-PSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPS 252 (543)
Q Consensus 177 ~~-~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps 252 (543)
+. +.... ..|+..-...|.+.......+.|+..+.-+
T Consensus 139 ~~~G~~gq---------------------------------------~~YaaAN~~lda~a~~~~~~g~~~~sI~wg 176 (181)
T PF08659_consen 139 SLLGGPGQ---------------------------------------SAYAAANAFLDALARQRRSRGLPAVSINWG 176 (181)
T ss_dssp HHTT-TTB---------------------------------------HHHHHHHHHHHHHHHHHHHTTSEEEEEEE-
T ss_pred HhccCcch---------------------------------------HhHHHHHHHHHHHHHHHHhCCCCEEEEEcc
Confidence 42 22111 579888888888877655568898777654
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=9.1e-10 Score=106.91 Aligned_cols=164 Identities=11% Similarity=0.161 Sum_probs=111.5
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||++-||+.++++|.+.|. +|.+..|..+ ++++.. +.++. ...++..+.+|+
T Consensus 3 ~~~k~~lVtGas~GIG~aia~~la~~G~---~V~~~~r~~~------~l~~~~-----~~i~~-----~~~~~~~~~~D~ 63 (227)
T PRK08862 3 IKSSIILITSAGSVLGRTISCHFARLGA---TLILCDQDQS------ALKDTY-----EQCSA-----LTDNVYSFQLKD 63 (227)
T ss_pred CCCeEEEEECCccHHHHHHHHHHHHCCC---EEEEEcCCHH------HHHHHH-----HHHHh-----cCCCeEEEEccC
Confidence 4689999999999999999999999987 7888888642 222211 11111 123567788999
Q ss_pred CCCCCCCCHHHHHHHh-------c-CccEEEEcCccCC----Cc----ccHHHHHHHHHHHHHHHHHHHHh-c---cCCc
Q psy7538 108 TQLKLGISEIDKKELI-------D-NVDIVYHVAATIR----FD----EPIKTAVILNTRGTRDMLELSKQ-M---KNLK 167 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~-------~-~vd~ViH~AA~v~----~~----~~~~~~~~~Nv~gt~~ll~~a~~-~---~~l~ 167 (543)
++++ +++.++ . .+|++||+||... +. +.+...+++|+.++..+.+.+.. + ++-.
T Consensus 64 ~~~~------~~~~~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g 137 (227)
T PRK08862 64 FSQE------SIRHLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKG 137 (227)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCc
Confidence 8875 454443 3 6899999997432 11 23444677888887777655432 2 1235
Q ss_pred eEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cC
Q psy7538 168 CFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LG 243 (543)
Q Consensus 168 ~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~ 243 (543)
.+|++||..+... ...|+.||+..+.+.+..+. ++
T Consensus 138 ~Iv~isS~~~~~~-----------------------------------------~~~Y~asKaal~~~~~~la~el~~~~ 176 (227)
T PRK08862 138 VIVNVISHDDHQD-----------------------------------------LTGVESSNALVSGFTHSWAKELTPFN 176 (227)
T ss_pred eEEEEecCCCCCC-----------------------------------------cchhHHHHHHHHHHHHHHHHHHhhcC
Confidence 8999998532210 05799999998888876554 57
Q ss_pred CcEEEEecCeeeec
Q psy7538 244 MPCMILRPSIVVPI 257 (543)
Q Consensus 244 lp~~IlRps~V~G~ 257 (543)
+.+..+.||.|-..
T Consensus 177 Irvn~v~PG~i~t~ 190 (227)
T PRK08862 177 IRVGGVVPSIFSAN 190 (227)
T ss_pred cEEEEEecCcCcCC
Confidence 99999999866443
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.3e-09 Score=110.81 Aligned_cols=120 Identities=14% Similarity=0.131 Sum_probs=82.8
Q ss_pred EEEcCcchhHHHHHHHHHhhC-CCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCCCC
Q psy7538 34 FLSGGSGFLGKVLIEKILRLE-PNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQLKL 112 (543)
Q Consensus 34 lITGatGFiG~~Lv~~Ll~~g-~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~~l 112 (543)
+||||+|.||.+++++|++.| + +|++..|+.. +.+++. +.+ .....++.++.+|+++.+
T Consensus 1 lITGas~GIG~aia~~l~~~G~~---~V~~~~r~~~------~~~~~~-----~~l-----~~~~~~~~~~~~Dl~d~~- 60 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKW---HVVMACRDFL------KAERAA-----KSA-----GMPKDSYTVMHLDLASLD- 60 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCC---EEEEEeCCHH------HHHHHH-----HHh-----cCCCCeEEEEEecCCCHH-
Confidence 599999999999999999998 5 7888888642 222111 001 111246788899999875
Q ss_pred CCCHHHHHHHh-------cCccEEEEcCccCCC--------cccHHHHHHHHHHHHHHHHHHHHh-c--cC--CceEEEE
Q psy7538 113 GISEIDKKELI-------DNVDIVYHVAATIRF--------DEPIKTAVILNTRGTRDMLELSKQ-M--KN--LKCFTYI 172 (543)
Q Consensus 113 gls~~~~~~l~-------~~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~~a~~-~--~~--l~~~V~v 172 (543)
+++.++ ..+|++||+||.... .+.++..+++|+.|+..+.+.+.. + .+ -.++|++
T Consensus 61 -----~v~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~v 135 (308)
T PLN00015 61 -----SVRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIV 135 (308)
T ss_pred -----HHHHHHHHHHhcCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEE
Confidence 444443 258999999986421 134567899999998887666543 1 12 3689999
Q ss_pred ecCccc
Q psy7538 173 STAYCH 178 (543)
Q Consensus 173 ST~y~~ 178 (543)
||..++
T Consensus 136 sS~~~~ 141 (308)
T PLN00015 136 GSITGN 141 (308)
T ss_pred eccccc
Confidence 998654
|
|
| >KOG1200|consensus | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.9e-09 Score=97.81 Aligned_cols=228 Identities=13% Similarity=0.155 Sum_probs=145.5
Q ss_pred chhhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceE
Q psy7538 22 DRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQ 101 (543)
Q Consensus 22 ~~i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~ 101 (543)
....+-...+...||||+.-||+++...|.+.|. +|.+..+..... ++-..++ +.. ..-.
T Consensus 6 ~~~~~r~~sk~~~vtGg~sGIGrAia~~la~~Ga---rv~v~dl~~~~A--~ata~~L--------------~g~-~~h~ 65 (256)
T KOG1200|consen 6 GEVVQRLMSKVAAVTGGSSGIGRAIAQLLAKKGA---RVAVADLDSAAA--EATAGDL--------------GGY-GDHS 65 (256)
T ss_pred HHHHHHHhcceeEEecCCchHHHHHHHHHHhcCc---EEEEeecchhhH--HHHHhhc--------------CCC-Cccc
Confidence 4455667789999999999999999999999987 777777765432 2222222 221 3455
Q ss_pred EEEccCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---c
Q psy7538 102 VISGDITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---K 164 (543)
Q Consensus 102 ~i~gDl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 164 (543)
.+.+|++++. +.+..++ .++++++||+..+. .+.++..+.+|+.|+..+-+++.+. .
T Consensus 66 aF~~DVS~a~------~v~~~l~e~~k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~ 139 (256)
T KOG1200|consen 66 AFSCDVSKAH------DVQNTLEEMEKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMN 139 (256)
T ss_pred eeeeccCcHH------HHHHHHHHHHHhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHh
Confidence 7789999986 5655443 48999999998763 4667889999999999998887653 1
Q ss_pred --CCceEEEEecCccc-cCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh
Q psy7538 165 --NLKCFTYISTAYCH-PSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME 241 (543)
Q Consensus 165 --~l~~~V~vST~y~~-~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~ 241 (543)
+.-++|.+||+-+- ++... ..|... . -..-++||.+|..+. +
T Consensus 140 ~~~~~sIiNvsSIVGkiGN~GQ---tnYAAs----------------------K------~GvIgftktaArEla----~ 184 (256)
T KOG1200|consen 140 QQQGLSIINVSSIVGKIGNFGQ---TNYAAS----------------------K------GGVIGFTKTAARELA----R 184 (256)
T ss_pred cCCCceEEeehhhhcccccccc---hhhhhh----------------------c------CceeeeeHHHHHHHh----h
Confidence 22389999998442 22110 001000 0 022344555554433 2
Q ss_pred cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCC
Q psy7538 242 LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESE 321 (543)
Q Consensus 242 ~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~ 321 (543)
+++++..+-|+.|-.|-.+..| -.+...+...++..-.| ..+++|+.++.++..... -.
T Consensus 185 knIrvN~VlPGFI~tpMT~~mp---------~~v~~ki~~~iPmgr~G---------~~EevA~~V~fLAS~~ss---Yi 243 (256)
T KOG1200|consen 185 KNIRVNVVLPGFIATPMTEAMP---------PKVLDKILGMIPMGRLG---------EAEEVANLVLFLASDASS---YI 243 (256)
T ss_pred cCceEeEeccccccChhhhhcC---------HHHHHHHHccCCccccC---------CHHHHHHHHHHHhccccc---cc
Confidence 4899999999999777655433 24555555555433233 357889888877743322 12
Q ss_pred CCcEEEeecC
Q psy7538 322 RKSVCNLTSN 331 (543)
Q Consensus 322 ~~~vyni~s~ 331 (543)
.+..+.++++
T Consensus 244 TG~t~evtGG 253 (256)
T KOG1200|consen 244 TGTTLEVTGG 253 (256)
T ss_pred cceeEEEecc
Confidence 3555555544
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.06 E-value=2e-08 Score=90.55 Aligned_cols=199 Identities=15% Similarity=0.097 Sum_probs=131.3
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|.|.||||-+|+.|+++.+++|| +|.+++|++... ...+.+.+++.|+.++
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGH---eVTAivRn~~K~------------------------~~~~~~~i~q~Difd~ 53 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGH---EVTAIVRNASKL------------------------AARQGVTILQKDIFDL 53 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCC---eeEEEEeChHhc------------------------cccccceeecccccCh
Confidence 6899999999999999999999998 789999987542 1225778899999998
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCcc---ccCCCccccc
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYC---HPSEKVLEER 187 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~---~~~~~~i~E~ 187 (543)
. .+...+.+.|+||..-+....+ +.. ........|++..+.. ++.|++.|+.+.+ ......++
T Consensus 54 ~------~~a~~l~g~DaVIsA~~~~~~~-~~~----~~~k~~~~li~~l~~a-gv~RllVVGGAGSL~id~g~rLvD-- 119 (211)
T COG2910 54 T------SLASDLAGHDAVISAFGAGASD-NDE----LHSKSIEALIEALKGA-GVPRLLVVGGAGSLEIDEGTRLVD-- 119 (211)
T ss_pred h------hhHhhhcCCceEEEeccCCCCC-hhH----HHHHHHHHHHHHHhhc-CCeeEEEEcCccceEEcCCceeec--
Confidence 6 6788889999999764433111 111 1223367788888887 8899999998844 22211121
Q ss_pred ccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCCCCCC
Q psy7538 188 TYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPGWTD 267 (543)
Q Consensus 188 ~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~gw~d 267 (543)
.|.-|. ..|..++..+|.+=.-..+.++.|+.+-|+..+-|++..
T Consensus 120 ---~p~fP~--------------------------ey~~~A~~~ae~L~~Lr~~~~l~WTfvSPaa~f~PGerT------ 164 (211)
T COG2910 120 ---TPDFPA--------------------------EYKPEALAQAEFLDSLRAEKSLDWTFVSPAAFFEPGERT------ 164 (211)
T ss_pred ---CCCCch--------------------------hHHHHHHHHHHHHHHHhhccCcceEEeCcHHhcCCcccc------
Confidence 111111 356677888885422222236999999999887764421
Q ss_pred CCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcc
Q psy7538 268 NINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLN 316 (543)
Q Consensus 268 ~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~ 316 (543)
+.| ..|.-..+. ....-+.|...|-|-+++.-++++..
T Consensus 165 g~y---------rlggD~ll~--n~~G~SrIS~aDYAiA~lDe~E~~~h 202 (211)
T COG2910 165 GNY---------RLGGDQLLV--NAKGESRISYADYAIAVLDELEKPQH 202 (211)
T ss_pred Cce---------EeccceEEE--cCCCceeeeHHHHHHHHHHHHhcccc
Confidence 111 111111111 23334678888889999988887764
|
|
| >KOG3019|consensus | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.8e-09 Score=100.02 Aligned_cols=229 Identities=11% Similarity=0.026 Sum_probs=138.1
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCC-------cCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceE
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPN-------VKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQ 101 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~-------v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~ 101 (543)
+++..++-+++||++..|.-...+ ||+ -..|.++.|.+... ++.
T Consensus 11 ~sr~a~~~~~~g~i~~nl~~~~~~-~H~t~~~~a~~h~vtv~sR~pg~~----------------------------rit 61 (315)
T KOG3019|consen 11 KSRDAVSNWSNGIIRENLGSETSC-CHDTNVHSADNHAVTVLSRSPGKA----------------------------RIT 61 (315)
T ss_pred ccccCCCCccccchhccccCcccc-cccCCCCcccccceEEEecCCCCc----------------------------ccc
Confidence 345677889999999888764432 222 13788999987532 222
Q ss_pred EEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccC------CCcccH-HHHHHHHHHHHHHHHHHHHhccCC-ceEEEEe
Q psy7538 102 VISGDITQLKLGISEIDKKELIDNVDIVYHVAATI------RFDEPI-KTAVILNTRGTRDMLELSKQMKNL-KCFTYIS 173 (543)
Q Consensus 102 ~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v------~~~~~~-~~~~~~Nv~gt~~ll~~a~~~~~l-~~~V~vS 173 (543)
+-+.|. +. +.-.|+.+++.++.. ++.+.. ++....-+..|..|.++...++.. +.+|.+|
T Consensus 62 w~el~~--~G----------ip~sc~a~vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~ 129 (315)
T KOG3019|consen 62 WPELDF--PG----------IPISCVAGVNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVS 129 (315)
T ss_pred cchhcC--CC----------CceehHHHHhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEE
Confidence 221111 11 111333444443321 222222 223333345578899999888764 4899999
Q ss_pred cCccccC--CCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHH--HHHHHHHhhcCCcEEEE
Q psy7538 174 TAYCHPS--EKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLA--EGLVAECMELGMPCMIL 249 (543)
Q Consensus 174 T~y~~~~--~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~a--E~~v~~~~~~~lp~~Il 249 (543)
....+.. ....+|+..-..+ .| ++.... |.......+ ...++++
T Consensus 130 gva~y~pS~s~eY~e~~~~qgf------------------------------d~-~srL~l~WE~aA~~~~~-~~r~~~i 177 (315)
T KOG3019|consen 130 GVAVYVPSESQEYSEKIVHQGF------------------------------DI-LSRLCLEWEGAALKANK-DVRVALI 177 (315)
T ss_pred eeEEeccccccccccccccCCh------------------------------HH-HHHHHHHHHHHhhccCc-ceeEEEE
Confidence 8854433 3344454322111 11 122211 222222233 6899999
Q ss_pred ecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEee
Q psy7538 250 RPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLT 329 (543)
Q Consensus 250 Rps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~ 329 (543)
|.+.|.|.+.. ..+..-+...++.|.+ .|++++.+.+||+||+++.+..+++++.. ..+.|-+
T Consensus 178 R~GvVlG~gGG--------a~~~M~lpF~~g~GGP---lGsG~Q~fpWIHv~DL~~li~~ale~~~v------~GViNgv 240 (315)
T KOG3019|consen 178 RIGVVLGKGGG--------ALAMMILPFQMGAGGP---LGSGQQWFPWIHVDDLVNLIYEALENPSV------KGVINGV 240 (315)
T ss_pred EEeEEEecCCc--------chhhhhhhhhhccCCc---CCCCCeeeeeeehHHHHHHHHHHHhcCCC------Cceeccc
Confidence 99999998531 1111111123333332 68999999999999999999999998765 5689999
Q ss_pred cCCCCcccHHHHHHHHhhhh
Q psy7538 330 SNKDYKITWQEICDIGKDIV 349 (543)
Q Consensus 330 s~~~~~~t~~e~~~~i~~~~ 349 (543)
.+ ++.+..|+++.+...+
T Consensus 241 AP--~~~~n~Ef~q~lg~aL 258 (315)
T KOG3019|consen 241 AP--NPVRNGEFCQQLGSAL 258 (315)
T ss_pred CC--CccchHHHHHHHHHHh
Confidence 88 9999999999999998
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.02 E-value=8.5e-09 Score=94.55 Aligned_cols=163 Identities=17% Similarity=0.244 Sum_probs=116.0
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+.|-+||||||+.-||..|++++++.|- +|.+..|+ ++||++. ....+.+.-..+|+
T Consensus 3 ~tgnTiLITGG~sGIGl~lak~f~elgN---~VIi~gR~------e~~L~e~--------------~~~~p~~~t~v~Dv 59 (245)
T COG3967 3 TTGNTILITGGASGIGLALAKRFLELGN---TVIICGRN------EERLAEA--------------KAENPEIHTEVCDV 59 (245)
T ss_pred ccCcEEEEeCCcchhhHHHHHHHHHhCC---EEEEecCc------HHHHHHH--------------HhcCcchheeeecc
Confidence 3578999999999999999999999984 78888886 5777665 23345677888999
Q ss_pred CCCCCCCCHHHHHHHh----c---CccEEEEcCccCCC---c------ccHHHHHHHHHHHHHHHHHHHHhc--c-CCce
Q psy7538 108 TQLKLGISEIDKKELI----D---NVDIVYHVAATIRF---D------EPIKTAVILNTRGTRDMLELSKQM--K-NLKC 168 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~----~---~vd~ViH~AA~v~~---~------~~~~~~~~~Nv~gt~~ll~~a~~~--~-~l~~ 168 (543)
.|.+ .++++. + +.++++++||..+- . +...+-+++|..++.+|..+...+ + .-..
T Consensus 60 ~d~~------~~~~lvewLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~ 133 (245)
T COG3967 60 ADRD------SRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEAT 133 (245)
T ss_pred cchh------hHHHHHHHHHhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCce
Confidence 9876 333333 2 47999999997642 1 123456889999999988776543 1 1347
Q ss_pred EEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCC
Q psy7538 169 FTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGM 244 (543)
Q Consensus 169 ~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~l 244 (543)
+|.|||.-+..+... . -.|..||+.-...-...+. .++
T Consensus 134 IInVSSGLafvPm~~-------------------------------------~-PvYcaTKAaiHsyt~aLR~Qlk~t~v 175 (245)
T COG3967 134 IINVSSGLAFVPMAS-------------------------------------T-PVYCATKAAIHSYTLALREQLKDTSV 175 (245)
T ss_pred EEEeccccccCcccc-------------------------------------c-ccchhhHHHHHHHHHHHHHHhhhcce
Confidence 899999866543221 0 3699999877665444333 467
Q ss_pred cEEEEecCeeeec
Q psy7538 245 PCMILRPSIVVPI 257 (543)
Q Consensus 245 p~~IlRps~V~G~ 257 (543)
.++=+-|+.|-.+
T Consensus 176 eVIE~~PP~V~t~ 188 (245)
T COG3967 176 EVIELAPPLVDTT 188 (245)
T ss_pred EEEEecCCceecC
Confidence 8888888888554
|
|
| >KOG1208|consensus | Back alignment and domain information |
|---|
Probab=99.01 E-value=8.1e-09 Score=104.23 Aligned_cols=179 Identities=17% Similarity=0.226 Sum_probs=122.0
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC-CCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK-KGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~-~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
.+.+++++|||||.-||...+++|.++|. +|++..|.. ++..+.+++++ +....++.++.+
T Consensus 32 ~~~~~~~vVTGansGIG~eta~~La~~Ga---~Vv~~~R~~~~~~~~~~~i~~---------------~~~~~~i~~~~l 93 (314)
T KOG1208|consen 32 DLSGKVALVTGATSGIGFETARELALRGA---HVVLACRNEERGEEAKEQIQK---------------GKANQKIRVIQL 93 (314)
T ss_pred cCCCcEEEEECCCCchHHHHHHHHHhCCC---EEEEEeCCHHHHHHHHHHHHh---------------cCCCCceEEEEC
Confidence 46789999999999999999999999984 899999986 22222222221 234568899999
Q ss_pred cCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC----c-ccHHHHHHHHHHHHHHHHH----HHHhccCCceE
Q psy7538 106 DITQLKLGISEIDKKELID-------NVDIVYHVAATIRF----D-EPIKTAVILNTRGTRDMLE----LSKQMKNLKCF 169 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~----~-~~~~~~~~~Nv~gt~~ll~----~a~~~~~l~~~ 169 (543)
|+++.. +++...+ ..|+.|+.||.... . +-.+..+.+|..|...|.+ .++.. ...|+
T Consensus 94 DLssl~------SV~~fa~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s-~~~RI 166 (314)
T KOG1208|consen 94 DLSSLK------SVRKFAEEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRS-APSRI 166 (314)
T ss_pred CCCCHH------HHHHHHHHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhC-CCCCE
Confidence 999876 4544433 57999999997642 2 3467789999999666554 45554 33799
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccC--CCCchHHHHHHHHHHHHHHHhh---cCC
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILG--EFPNSYAYTKCLAEGLVAECME---LGM 244 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~--~~pn~Y~~tK~~aE~~v~~~~~---~~l 244 (543)
|++||.-. ......+ .+.+.... .....|+.||..-.....+..+ .|+
T Consensus 167 V~vsS~~~-~~~~~~~--------------------------~l~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~~V 219 (314)
T KOG1208|consen 167 VNVSSILG-GGKIDLK--------------------------DLSGEKAKLYSSDAAYALSKLANVLLANELAKRLKKGV 219 (314)
T ss_pred EEEcCccc-cCccchh--------------------------hccchhccCccchhHHHHhHHHHHHHHHHHHHHhhcCc
Confidence 99999844 1110000 00000000 0012599999988777777766 278
Q ss_pred cEEEEecCeeeec
Q psy7538 245 PCMILRPSIVVPI 257 (543)
Q Consensus 245 p~~IlRps~V~G~ 257 (543)
.+..+.||.|..+
T Consensus 220 ~~~~~hPG~v~t~ 232 (314)
T KOG1208|consen 220 TTYSVHPGVVKTT 232 (314)
T ss_pred eEEEECCCccccc
Confidence 8999999988776
|
|
| >KOG1610|consensus | Back alignment and domain information |
|---|
Probab=99.00 E-value=6.2e-08 Score=95.00 Aligned_cols=158 Identities=16% Similarity=0.238 Sum_probs=114.9
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
..+|-|||||+-.-.|..|+.+|.++|. +|++-.-.+.+ .+-++. + ...++...+..|+
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf---~V~Agcl~~~g---ae~L~~------------~---~~s~rl~t~~LDV 85 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKGF---RVFAGCLTEEG---AESLRG------------E---TKSPRLRTLQLDV 85 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcCC---EEEEEeecCch---HHHHhh------------h---hcCCcceeEeecc
Confidence 4678899999998899999999999997 67776644333 222221 1 1146778889999
Q ss_pred CCCCCCCCHHHHHHHhc---------CccEEEEcCccCCC--------cccHHHHHHHHHHHHHHHHH----HHHhccCC
Q psy7538 108 TQLKLGISEIDKKELID---------NVDIVYHVAATIRF--------DEPIKTAVILNTRGTRDMLE----LSKQMKNL 166 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~---------~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~----~a~~~~~l 166 (543)
++++ +++++.+ +.-.|||+||...+ -+.++..+++|..|+.++.. +.++.+
T Consensus 86 T~~e------si~~a~~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar-- 157 (322)
T KOG1610|consen 86 TKPE------SVKEAAQWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR-- 157 (322)
T ss_pred CCHH------HHHHHHHHHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc--
Confidence 9987 5655543 35789999995532 24567789999999776644 455554
Q ss_pred ceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----c
Q psy7538 167 KCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----L 242 (543)
Q Consensus 167 ~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~ 242 (543)
.|+|++||..+..... . -.+|+.||+..|......+. .
T Consensus 158 GRvVnvsS~~GR~~~p----------~----------------------------~g~Y~~SK~aVeaf~D~lR~EL~~f 199 (322)
T KOG1610|consen 158 GRVVNVSSVLGRVALP----------A----------------------------LGPYCVSKFAVEAFSDSLRRELRPF 199 (322)
T ss_pred CeEEEecccccCccCc----------c----------------------------cccchhhHHHHHHHHHHHHHHHHhc
Confidence 5999999986632211 0 16899999999988766554 7
Q ss_pred CCcEEEEecC
Q psy7538 243 GMPCMILRPS 252 (543)
Q Consensus 243 ~lp~~IlRps 252 (543)
|+.+.|+-||
T Consensus 200 GV~VsiiePG 209 (322)
T KOG1610|consen 200 GVKVSIIEPG 209 (322)
T ss_pred CcEEEEeccC
Confidence 9999999999
|
|
| >KOG4169|consensus | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.9e-09 Score=100.37 Aligned_cols=224 Identities=15% Similarity=0.145 Sum_probs=139.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||++++|||.|-||..+.++|+.+| ++.+.++.|... .++...| +..+ ...++.++.+|+
T Consensus 3 ~tGKna~vtggagGIGl~~sk~Ll~kg--ik~~~i~~~~En-~~a~akL------------~ai~---p~~~v~F~~~DV 64 (261)
T KOG4169|consen 3 LTGKNALVTGGAGGIGLATSKALLEKG--IKVLVIDDSEEN-PEAIAKL------------QAIN---PSVSVIFIKCDV 64 (261)
T ss_pred ccCceEEEecCCchhhHHHHHHHHHcC--chheeehhhhhC-HHHHHHH------------hccC---CCceEEEEEecc
Confidence 469999999999999999999999995 445555555433 2222233 3222 235899999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCCcccHHHHHHHHHHH----HHHHHHHHHhcc--CCceEEEEec
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRFDEPIKTAVILNTRG----TRDMLELSKQMK--NLKCFTYIST 174 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~~~~~~~~~~~Nv~g----t~~ll~~a~~~~--~l~~~V~vST 174 (543)
++.. +++..++ .+|++|+-|+... +.+++..+.+|+.| |.-.+....+-. .-.-+|.+||
T Consensus 65 t~~~------~~~~~f~ki~~~fg~iDIlINgAGi~~-dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsS 137 (261)
T KOG4169|consen 65 TNRG------DLEAAFDKILATFGTIDILINGAGILD-DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSS 137 (261)
T ss_pred ccHH------HHHHHHHHHHHHhCceEEEEccccccc-chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEecc
Confidence 9854 6666554 5899999999865 67788899999765 455555554432 2357899999
Q ss_pred CccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHH------HhhcCCcEEE
Q psy7538 175 AYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAE------CMELGMPCMI 248 (543)
Q Consensus 175 ~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~------~~~~~lp~~I 248 (543)
.++..+ .|.. ..|+.||+-.=.+-++ +.+.|+.+..
T Consensus 138 v~GL~P----------~p~~----------------------------pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~a 179 (261)
T KOG4169|consen 138 VAGLDP----------MPVF----------------------------PVYAASKAGVVGFTRSLADLAYYQRSGVRFNA 179 (261)
T ss_pred ccccCc----------cccc----------------------------hhhhhcccceeeeehhhhhhhhHhhcCEEEEE
Confidence 977432 2221 3566666532222222 2224899999
Q ss_pred EecCeeeecCCCCC---CCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 249 LRPSIVVPIYKEPL---PGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 249 lRps~V~G~~~~p~---~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
+.|+.+-..-.+.+ .+|.+- ++ .+....+ ...--+..++++.++.+++.... +.+
T Consensus 180 vCPG~t~t~l~~~~~~~~~~~e~--~~--~~~~~l~------------~~~~q~~~~~a~~~v~aiE~~~N------Gai 237 (261)
T KOG4169|consen 180 VCPGFTRTDLAENIDASGGYLEY--SD--SIKEALE------------RAPKQSPACCAINIVNAIEYPKN------GAI 237 (261)
T ss_pred ECCCcchHHHHHHHHhcCCcccc--cH--HHHHHHH------------HcccCCHHHHHHHHHHHHhhccC------CcE
Confidence 99997633322221 222211 10 1111111 11123456788999999988554 889
Q ss_pred EEeecCCCCcc
Q psy7538 326 CNLTSNKDYKI 336 (543)
Q Consensus 326 yni~s~~~~~~ 336 (543)
|-+.++..+++
T Consensus 238 w~v~~g~l~~~ 248 (261)
T KOG4169|consen 238 WKVDSGSLEPV 248 (261)
T ss_pred EEEecCcEEEe
Confidence 99988744443
|
|
| >KOG0725|consensus | Back alignment and domain information |
|---|
Probab=98.97 E-value=3e-08 Score=98.49 Aligned_cols=173 Identities=18% Similarity=0.227 Sum_probs=123.1
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
-++||.++||||+.-||++++++|.+.|. +|++..|..... ++-.+++.. . .....++..+.+|
T Consensus 5 ~l~gkvalVTG~s~GIG~aia~~la~~Ga---~v~i~~r~~~~~--~~~~~~~~~---------~--~~~~~~~~~~~~D 68 (270)
T KOG0725|consen 5 RLAGKVALVTGGSSGIGKAIALLLAKAGA---KVVITGRSEERL--EETAQELGG---------L--GYTGGKVLAIVCD 68 (270)
T ss_pred cCCCcEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHHHH--HHHHHHHHh---------c--CCCCCeeEEEECc
Confidence 36899999999999999999999999996 899999975321 111111110 0 1124578999999
Q ss_pred CCCCCCCCCHHHHHHHh--------cCccEEEEcCccCCC--------cccHHHHHHHHHHH-HHHHHHHHHhc---cCC
Q psy7538 107 ITQLKLGISEIDKKELI--------DNVDIVYHVAATIRF--------DEPIKTAVILNTRG-TRDMLELSKQM---KNL 166 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~--------~~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~g-t~~ll~~a~~~---~~l 166 (543)
+++.+ +.+.++ ...|++++.||.... .+.++..+++|+.| +.++...|..+ .+-
T Consensus 69 v~~~~------~~~~l~~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~g 142 (270)
T KOG0725|consen 69 VSKEV------DVEKLVEFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKG 142 (270)
T ss_pred CCCHH------HHHHHHHHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCC
Confidence 99764 444433 358999999997643 24466789999995 77777776654 134
Q ss_pred ceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----c
Q psy7538 167 KCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----L 242 (543)
Q Consensus 167 ~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~ 242 (543)
..++++||..+..... ..+..|+.||+..+++.+..+. +
T Consensus 143 g~I~~~ss~~~~~~~~-------------------------------------~~~~~Y~~sK~al~~ltr~lA~El~~~ 185 (270)
T KOG0725|consen 143 GSIVNISSVAGVGPGP-------------------------------------GSGVAYGVSKAALLQLTRSLAKELAKH 185 (270)
T ss_pred ceEEEEeccccccCCC-------------------------------------CCcccchhHHHHHHHHHHHHHHHHhhc
Confidence 5788888875432211 0114799999999999987655 6
Q ss_pred CCcEEEEecCeeeecC
Q psy7538 243 GMPCMILRPSIVVPIY 258 (543)
Q Consensus 243 ~lp~~IlRps~V~G~~ 258 (543)
|+++..+=|+.|..+.
T Consensus 186 gIRvN~v~PG~i~T~~ 201 (270)
T KOG0725|consen 186 GIRVNSVSPGLVKTSL 201 (270)
T ss_pred CcEEEEeecCcEeCCc
Confidence 8999999999887765
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=98.94 E-value=4.9e-08 Score=95.92 Aligned_cols=167 Identities=14% Similarity=0.200 Sum_probs=113.5
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+.+|+|+||||++-||+.++++|++.|. +|+++.|..... ..+.+.+... . ... ..+.+...|+
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~~~G~---~v~~~~~~~~~~-~~~~~~~~~~---------~--~~~-~~~~~~~~Dv 66 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALAREGA---RVVVAARRSEEE-AAEALAAAIK---------E--AGG-GRAAAVAADV 66 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---eEEEEcCCCchh-hHHHHHHHHH---------h--cCC-CcEEEEEecC
Confidence 4689999999999999999999998886 677777765431 1111111100 0 000 3677888999
Q ss_pred CC-CCCCCCHHHHHHHh-------cCccEEEEcCccCC----C----cccHHHHHHHHHHHHHHHHHHHHhccCCceEEE
Q psy7538 108 TQ-LKLGISEIDKKELI-------DNVDIVYHVAATIR----F----DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTY 171 (543)
Q Consensus 108 ~~-~~lgls~~~~~~l~-------~~vd~ViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~ 171 (543)
++ +. +.+.++ .++|+++|+|+... + .+.++..+++|+.|...+.+++...-.-+++|.
T Consensus 67 s~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~ 140 (251)
T COG1028 67 SDDEE------SVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVN 140 (251)
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEE
Confidence 97 43 444333 24899999999743 2 245667899999999998885543211129999
Q ss_pred EecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEE
Q psy7538 172 ISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCM 247 (543)
Q Consensus 172 vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~ 247 (543)
+||..+. ..... ...|+.||+..+.+....+. .|+.+.
T Consensus 141 isS~~~~-~~~~~-------------------------------------~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~ 182 (251)
T COG1028 141 ISSVAGL-GGPPG-------------------------------------QAAYAASKAALIGLTKALALELAPRGIRVN 182 (251)
T ss_pred ECCchhc-CCCCC-------------------------------------cchHHHHHHHHHHHHHHHHHHHhhhCcEEE
Confidence 9998654 22110 15899999998888766553 578899
Q ss_pred EEecCee
Q psy7538 248 ILRPSIV 254 (543)
Q Consensus 248 IlRps~V 254 (543)
.+-|+.+
T Consensus 183 ~v~PG~~ 189 (251)
T COG1028 183 AVAPGYI 189 (251)
T ss_pred EEEeccC
Confidence 9999944
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=98.94 E-value=6.5e-08 Score=97.77 Aligned_cols=241 Identities=12% Similarity=0.067 Sum_probs=135.3
Q ss_pred cCCCEEEEEcC--cchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 28 YENKSIFLSGG--SGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 28 ~~~~~VlITGa--tGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
++||+++|||| +.-||.++++.|.+.|. +|.+ .|.... .+++..-....-++.++.............+.+
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga---~Vv~-~~~~~~---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAAGA---EILV-GTWVPA---LNIFETSLRRGKFDESRKLPDGSLMEITKVYPL 79 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHCCC---EEEE-EeCcch---hhHHHHhhhccccchhhhcccccccCcCeeeec
Confidence 78999999999 78899999999999996 6666 554321 122211111000111110000000112456788
Q ss_pred cC--CCCC-C-----------CCCHHHHHHHhc-------CccEEEEcCccC-----CC----cccHHHHHHHHHHHHHH
Q psy7538 106 DI--TQLK-L-----------GISEIDKKELID-------NVDIVYHVAATI-----RF----DEPIKTAVILNTRGTRD 155 (543)
Q Consensus 106 Dl--~~~~-l-----------gls~~~~~~l~~-------~vd~ViH~AA~v-----~~----~~~~~~~~~~Nv~gt~~ 155 (543)
|+ ++++ + +-++++++.+++ .+|++||+||.. .+ .+.++..+++|+.|...
T Consensus 80 D~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~ 159 (303)
T PLN02730 80 DAVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVS 159 (303)
T ss_pred ceecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHH
Confidence 88 3332 0 011224444433 489999999632 11 24567789999999999
Q ss_pred HHHHHHhc-cCCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHH
Q psy7538 156 MLELSKQM-KNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEG 234 (543)
Q Consensus 156 ll~~a~~~-~~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~ 234 (543)
+.+++... ..-.++|++||..+.... |. +...|+.||+..+.
T Consensus 160 l~~~~~p~m~~~G~II~isS~a~~~~~----------p~---------------------------~~~~Y~asKaAl~~ 202 (303)
T PLN02730 160 LLQHFGPIMNPGGASISLTYIASERII----------PG---------------------------YGGGMSSAKAALES 202 (303)
T ss_pred HHHHHHHHHhcCCEEEEEechhhcCCC----------CC---------------------------CchhhHHHHHHHHH
Confidence 88887652 112689999987543211 00 00369999999998
Q ss_pred HHHHHhh-----cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHH
Q psy7538 235 LVAECME-----LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFL 309 (543)
Q Consensus 235 ~v~~~~~-----~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~ 309 (543)
+.+..+. +++.+..+-||.|-.+.....+ ............. + ...+...+|++++++.
T Consensus 203 l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~-------~~~~~~~~~~~~~-------p--l~r~~~peevA~~~~f 266 (303)
T PLN02730 203 DTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIG-------FIDDMIEYSYANA-------P--LQKELTADEVGNAAAF 266 (303)
T ss_pred HHHHHHHHhCcCCCeEEEEEeeCCccCchhhccc-------ccHHHHHHHHhcC-------C--CCCCcCHHHHHHHHHH
Confidence 8876554 3688888998876443221100 0001111111110 1 0123567999999888
Q ss_pred HhhhhcccCCCCCCcEEEeecC
Q psy7538 310 FTWDFLNSKESERKSVCNLTSN 331 (543)
Q Consensus 310 a~~~~~~~~~~~~~~vyni~s~ 331 (543)
++..... . ..+.++.+.++
T Consensus 267 LaS~~a~-~--itG~~l~vdGG 285 (303)
T PLN02730 267 LASPLAS-A--ITGATIYVDNG 285 (303)
T ss_pred HhCcccc-C--ccCCEEEECCC
Confidence 8754332 1 24666666544
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=98.92 E-value=2.5e-08 Score=123.81 Aligned_cols=181 Identities=12% Similarity=0.081 Sum_probs=121.0
Q ss_pred hhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCC--------HHHHHHHH------------------
Q psy7538 26 KTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKT--------PNQRVEEL------------------ 79 (543)
Q Consensus 26 ~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~--------~~~rl~~~------------------ 79 (543)
.+-+|++++||||+|-||..++++|.++|. .+|+++.|+..... .+..++..
T Consensus 1993 ~l~~g~vvLVTGGarGIG~aiA~~LA~~~g--a~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~ 2070 (2582)
T TIGR02813 1993 ALNSDDVFLVTGGAKGVTFECALELAKQCQ--AHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVD 2070 (2582)
T ss_pred ccCCCCEEEEeCCCCHHHHHHHHHHHHhcC--CEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhh
Confidence 455789999999999999999999999842 28889999831100 00111100
Q ss_pred ------hc-CchhHHHHhhcCcCCCCceEEEEccCCCCCCCCCHHHHHHHhc------CccEEEEcCccCCC-------c
Q psy7538 80 ------FE-SPVFDALKTLRGKSILQKIQVISGDITQLKLGISEIDKKELID------NVDIVYHVAATIRF-------D 139 (543)
Q Consensus 80 ------~~-~~~f~~l~~~~~~~~~~~v~~i~gDl~~~~lgls~~~~~~l~~------~vd~ViH~AA~v~~-------~ 139 (543)
.. ..+-..+... .....++.++.+|++|.+ +++.+++ ++|+|||+||.... .
T Consensus 2071 ~~~~~~~~~~ei~~~la~l--~~~G~~v~y~~~DVtD~~------av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~ 2142 (2582)
T TIGR02813 2071 ALVRPVLSSLEIAQALAAF--KAAGASAEYASADVTNSV------SVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTL 2142 (2582)
T ss_pred hcccccchhHHHHHHHHHH--HhcCCcEEEEEccCCCHH------HHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCH
Confidence 00 0000111110 112346889999999975 5555443 48999999997532 2
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccC
Q psy7538 140 EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILG 219 (543)
Q Consensus 140 ~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~ 219 (543)
+.++..+++|+.|+.++++++... ..+++|++||..+......
T Consensus 2143 e~f~~v~~~nv~G~~~Ll~al~~~-~~~~IV~~SSvag~~G~~g------------------------------------ 2185 (2582)
T TIGR02813 2143 EEFNAVYGTKVDGLLSLLAALNAE-NIKLLALFSSAAGFYGNTG------------------------------------ 2185 (2582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEechhhcCCCCC------------------------------------
Confidence 456778999999999999999875 5678999999855322110
Q ss_pred CCCchHHHHHHHHHHHHHHHhh--cCCcEEEEecCeee
Q psy7538 220 EFPNSYAYTKCLAEGLVAECME--LGMPCMILRPSIVV 255 (543)
Q Consensus 220 ~~pn~Y~~tK~~aE~~v~~~~~--~~lp~~IlRps~V~ 255 (543)
...|+.+|...+.+...... .+..+..+.||.+-
T Consensus 2186 --qs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wd 2221 (2582)
T TIGR02813 2186 --QSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWD 2221 (2582)
T ss_pred --cHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeec
Confidence 05799999888877766655 35777888887553
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >KOG1611|consensus | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.3e-07 Score=88.22 Aligned_cols=215 Identities=13% Similarity=0.115 Sum_probs=128.2
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
..++||||||+--||--|+++|++. +++..+....|..... .+-++.+ ....+++++++.|++
T Consensus 2 spksv~ItGaNRGIGlgLVk~llk~-~~i~~iiat~r~~e~a--~~~l~~k--------------~~~d~rvHii~Ldvt 64 (249)
T KOG1611|consen 2 SPKSVFITGANRGIGLGLVKELLKD-KGIEVIIATARDPEKA--ATELALK--------------SKSDSRVHIIQLDVT 64 (249)
T ss_pred CCccEEEeccCcchhHHHHHHHhcC-CCcEEEEEecCChHHh--hHHHHHh--------------hccCCceEEEEEecc
Confidence 4577999999999999999999977 6775555555644322 2222211 224579999999999
Q ss_pred CCCC-CCCHHHHHHH--hcCccEEEEcCccCCC--------cccHHHHHHHHHHHHHHHHHHH----Hhcc---------
Q psy7538 109 QLKL-GISEIDKKEL--IDNVDIVYHVAATIRF--------DEPIKTAVILNTRGTRDMLELS----KQMK--------- 164 (543)
Q Consensus 109 ~~~l-gls~~~~~~l--~~~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~~a----~~~~--------- 164 (543)
+.+- .=..++++++ .++.|+.++.||.... .+.+-..+++|+.|+..+.+.+ ++..
T Consensus 65 ~deS~~~~~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s 144 (249)
T KOG1611|consen 65 CDESIDNFVQEVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLS 144 (249)
T ss_pred cHHHHHHHHHHHHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCccc
Confidence 8761 0001222333 2367999999996521 1224457899998876665543 3321
Q ss_pred -CCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh--
Q psy7538 165 -NLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-- 241 (543)
Q Consensus 165 -~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-- 241 (543)
+-..+|++||..+..... .+.+. ..|..||++--...+...-
T Consensus 145 ~~raaIinisS~~~s~~~~------~~~~~-----------------------------~AYrmSKaAlN~f~ksls~dL 189 (249)
T KOG1611|consen 145 VSRAAIINISSSAGSIGGF------RPGGL-----------------------------SAYRMSKAALNMFAKSLSVDL 189 (249)
T ss_pred ccceeEEEeeccccccCCC------CCcch-----------------------------hhhHhhHHHHHHHHHHhhhhh
Confidence 112788898874432111 11111 6899999998888877654
Q ss_pred cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCC
Q psy7538 242 LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESE 321 (543)
Q Consensus 242 ~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~ 321 (543)
...++.++-.. |||+.--.|- .-..+.+++-+..++....+... . .
T Consensus 190 ~~~~ilv~sih----------PGwV~TDMgg---------------------~~a~ltveeSts~l~~~i~kL~~-~--h 235 (249)
T KOG1611|consen 190 KDDHILVVSIH----------PGWVQTDMGG---------------------KKAALTVEESTSKLLASINKLKN-E--H 235 (249)
T ss_pred cCCcEEEEEec----------CCeEEcCCCC---------------------CCcccchhhhHHHHHHHHHhcCc-c--c
Confidence 33344333222 4565432211 22335567777777777766543 1 2
Q ss_pred CCcEEEee
Q psy7538 322 RKSVCNLT 329 (543)
Q Consensus 322 ~~~vyni~ 329 (543)
+|..||..
T Consensus 236 nG~ffn~d 243 (249)
T KOG1611|consen 236 NGGFFNRD 243 (249)
T ss_pred CcceEccC
Confidence 46677653
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.8e-08 Score=98.71 Aligned_cols=163 Identities=12% Similarity=0.085 Sum_probs=105.2
Q ss_pred HHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCCCCCCCHHHHHHHhc-
Q psy7538 46 LIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQLKLGISEIDKKELID- 124 (543)
Q Consensus 46 Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~~lgls~~~~~~l~~- 124 (543)
++++|++.|. +|+++.|+.... ....++.+|+++.+ +++.+++
T Consensus 1 ~a~~l~~~G~---~Vv~~~r~~~~~---------------------------~~~~~~~~Dl~~~~------~v~~~~~~ 44 (241)
T PRK12428 1 TARLLRFLGA---RVIGVDRREPGM---------------------------TLDGFIQADLGDPA------SIDAAVAA 44 (241)
T ss_pred ChHHHHhCCC---EEEEEeCCcchh---------------------------hhhHhhcccCCCHH------HHHHHHHH
Confidence 4688999986 788888875321 01235678998875 6666655
Q ss_pred ---CccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhc-cCCceEEEEecCccccCCC--cccccccCCCCChHHH
Q psy7538 125 ---NVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQM-KNLKCFTYISTAYCHPSEK--VLEERTYLPPDDPHQV 198 (543)
Q Consensus 125 ---~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~vST~y~~~~~~--~i~E~~y~~p~~~~~~ 198 (543)
++|+|||+||... .++++..+++|+.|+..+++++... ..-.++|++||..+..... +..|...... +
T Consensus 45 ~~~~iD~li~nAG~~~-~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~-~---- 118 (241)
T PRK12428 45 LPGRIDALFNIAGVPG-TAPVELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATA-S---- 118 (241)
T ss_pred hcCCCeEEEECCCCCC-CCCHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccc-h----
Confidence 5899999999764 3567889999999999999998753 2236999999996653211 1111000000 0
Q ss_pred HHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHh-h----cCCcEEEEecCeeeecC
Q psy7538 199 ILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECM-E----LGMPCMILRPSIVVPIY 258 (543)
Q Consensus 199 ~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~-~----~~lp~~IlRps~V~G~~ 258 (543)
. ++.+.... ....+....|+.||+..+.+.+..+ . +|+.+.+++||.|.++.
T Consensus 119 ------~-~~~~~~~~-~~~~~~~~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~ 175 (241)
T PRK12428 119 ------F-DEGAAWLA-AHPVALATGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPI 175 (241)
T ss_pred ------H-HHHHHhhh-ccCCCcccHHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcc
Confidence 0 00000000 0001122689999999998887666 2 58999999999987664
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=98.75 E-value=5.9e-08 Score=94.91 Aligned_cols=212 Identities=16% Similarity=0.170 Sum_probs=137.1
Q ss_pred cCc--chhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCCCCCC
Q psy7538 37 GGS--GFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQLKLGI 114 (543)
Q Consensus 37 Gat--GFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~~lgl 114 (543)
|++ +-||.+++++|++.|. +|++..|+.+.. ++.+++ +..+. + ..++.+|+++++
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga---~V~~~~~~~~~~--~~~~~~---------l~~~~-~-----~~~~~~D~~~~~--- 57 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGA---NVILTDRNEEKL--ADALEE---------LAKEY-G-----AEVIQCDLSDEE--- 57 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTE---EEEEEESSHHHH--HHHHHH---------HHHHT-T-----SEEEESCTTSHH---
T ss_pred CCCCCCChHHHHHHHHHHCCC---EEEEEeCChHHH--HHHHHH---------HHHHc-C-----CceEeecCcchH---
Confidence 666 9999999999999996 899999986321 122222 22222 1 225999999875
Q ss_pred CHHHHHHH-------h-cCccEEEEcCccCCC-----------cccHHHHHHHHHHHHHHHHHHHHhc-cCCceEEEEec
Q psy7538 115 SEIDKKEL-------I-DNVDIVYHVAATIRF-----------DEPIKTAVILNTRGTRDMLELSKQM-KNLKCFTYIST 174 (543)
Q Consensus 115 s~~~~~~l-------~-~~vd~ViH~AA~v~~-----------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~vST 174 (543)
+++.+ . ..+|+++|+|+.... .+.+...+++|+.+...+++.+... +.-.++|++||
T Consensus 58 ---~v~~~~~~~~~~~~g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss 134 (241)
T PF13561_consen 58 ---SVEALFDEAVERFGGRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISS 134 (241)
T ss_dssp ---HHHHHHHHHHHHHCSSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ---HHHHHHHHHHhhcCCCeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccc
Confidence 56655 3 468999999986543 1345668999999999998888542 22268999998
Q ss_pred CccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-----cCCcEEEE
Q psy7538 175 AYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-----LGMPCMIL 249 (543)
Q Consensus 175 ~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-----~~lp~~Il 249 (543)
..+..... ....|+.+|+..+.+.+..+. +|+++..+
T Consensus 135 ~~~~~~~~--------------------------------------~~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V 176 (241)
T PF13561_consen 135 IAAQRPMP--------------------------------------GYSAYSASKAALEGLTRSLAKELAPKKGIRVNAV 176 (241)
T ss_dssp GGGTSBST--------------------------------------TTHHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEE
T ss_pred hhhcccCc--------------------------------------cchhhHHHHHHHHHHHHHHHHHhccccCeeeeee
Confidence 85532211 015899999999998877544 48999999
Q ss_pred ecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEee
Q psy7538 250 RPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLT 329 (543)
Q Consensus 250 Rps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~ 329 (543)
.|+.|..+..+.. .....+.....+. ....-+...+|||++++.++..... -..|++..+.
T Consensus 177 ~pG~i~t~~~~~~-------~~~~~~~~~~~~~---------~pl~r~~~~~evA~~v~fL~s~~a~---~itG~~i~vD 237 (241)
T PF13561_consen 177 SPGPIETPMTERI-------PGNEEFLEELKKR---------IPLGRLGTPEEVANAVLFLASDAAS---YITGQVIPVD 237 (241)
T ss_dssp EESSBSSHHHHHH-------HTHHHHHHHHHHH---------STTSSHBEHHHHHHHHHHHHSGGGT---TGTSEEEEES
T ss_pred cccceeccchhcc-------ccccchhhhhhhh---------hccCCCcCHHHHHHHHHHHhCcccc---CccCCeEEEC
Confidence 9997754321100 0011122222111 1112345789999999988876532 1357777776
Q ss_pred cC
Q psy7538 330 SN 331 (543)
Q Consensus 330 s~ 331 (543)
+|
T Consensus 238 GG 239 (241)
T PF13561_consen 238 GG 239 (241)
T ss_dssp TT
T ss_pred CC
Confidence 55
|
... |
| >KOG1210|consensus | Back alignment and domain information |
|---|
Probab=98.73 E-value=2.8e-07 Score=90.34 Aligned_cols=204 Identities=20% Similarity=0.251 Sum_probs=127.8
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
++|+||||+--+|+.++..+.++|. .|.++.|+.+......+--++ ......+.+..+|+.+.
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga---~Vti~ar~~~kl~~a~~~l~l--------------~~~~~~v~~~S~d~~~Y 96 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGA---DVTITARSGKKLLEAKAELEL--------------LTQVEDVSYKSVDVIDY 96 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccC---ceEEEeccHHHHHHHHhhhhh--------------hhccceeeEeccccccH
Confidence 5899999999999999999999997 778899987543221111111 11223477899999765
Q ss_pred CCCCCHHHHHHHhc-------CccEEEEcCccCC---Cc----ccHHHHHHHHHHHHHHHHHHHHh-ccC---CceEEEE
Q psy7538 111 KLGISEIDKKELID-------NVDIVYHVAATIR---FD----EPIKTAVILNTRGTRDMLELSKQ-MKN---LKCFTYI 172 (543)
Q Consensus 111 ~lgls~~~~~~l~~-------~vd~ViH~AA~v~---~~----~~~~~~~~~Nv~gt~~ll~~a~~-~~~---l~~~V~v 172 (543)
+ ....+++ .+|.+||||+..- |. +..+..+++|..||.+++.++.. ++. ..+++.+
T Consensus 97 ~------~v~~~~~~l~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~v 170 (331)
T KOG1210|consen 97 D------SVSKVIEELRDLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILV 170 (331)
T ss_pred H------HHHHHHhhhhhccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEe
Confidence 4 4444443 3799999999641 21 33456799999999999887643 332 3389999
Q ss_pred ecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHH----HHHHHHHHHHhhcCCcEEE
Q psy7538 173 STAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTK----CLAEGLVAECMELGMPCMI 248 (543)
Q Consensus 173 ST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK----~~aE~~v~~~~~~~lp~~I 248 (543)
||..+.-.-.. | ++|..+| .+||.+-++..++++.++.
T Consensus 171 sS~~a~~~i~G-----y---------------------------------saYs~sK~alrgLa~~l~qE~i~~~v~Vt~ 212 (331)
T KOG1210|consen 171 SSQLAMLGIYG-----Y---------------------------------SAYSPSKFALRGLAEALRQELIKYGVHVTL 212 (331)
T ss_pred hhhhhhcCccc-----c---------------------------------cccccHHHHHHHHHHHHHHHHhhcceEEEE
Confidence 98744221110 0 4555555 4566555555446888888
Q ss_pred EecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhh
Q psy7538 249 LRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWD 313 (543)
Q Consensus 249 lRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~ 313 (543)
.-|+.+-.|+-|- +|..-|. ...+. +...+.+..+++|.+++.-+.+
T Consensus 213 ~~P~~~~tpGfE~-----En~tkP~----------~t~ii---~g~ss~~~~e~~a~~~~~~~~r 259 (331)
T KOG1210|consen 213 YYPPDTLTPGFER-----ENKTKPE----------ETKII---EGGSSVIKCEEMAKAIVKGMKR 259 (331)
T ss_pred EcCCCCCCCcccc-----ccccCch----------heeee---cCCCCCcCHHHHHHHHHhHHhh
Confidence 8888665553221 1111111 11111 2334558999999988766544
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=4.7e-07 Score=91.47 Aligned_cols=242 Identities=9% Similarity=0.026 Sum_probs=129.0
Q ss_pred cCCCEEEEEcCc--chhHHHHHHHHHhhCCCcCEEEEEecCCC------CCCHHHHHHHH---hcCc--hhHHHHhhcCc
Q psy7538 28 YENKSIFLSGGS--GFLGKVLIEKILRLEPNVKKIYLLMRTKK------GKTPNQRVEEL---FESP--VFDALKTLRGK 94 (543)
Q Consensus 28 ~~~~~VlITGat--GFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~------~~~~~~rl~~~---~~~~--~f~~l~~~~~~ 94 (543)
++||+++||||+ .-||+++++.|.+.|. +|++..|... ..+ .++.... .... .+.+.... .
T Consensus 6 ~~gk~alITGa~~~~GIG~a~A~~la~~Ga---~Vvv~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~--~ 79 (299)
T PRK06300 6 LTGKIAFIAGIGDDQGYGWGIAKALAEAGA---TILVGTWVPIYKIFSQSLE-LGKFDASRKLSNGSLLTFAKIYPM--D 79 (299)
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHCCC---EEEEEeccchhhhhhhhcc-cccccccccccccchhhhhhHHHh--h
Confidence 478999999994 7899999999999996 7776554310 000 0000000 0000 00000000 0
Q ss_pred CCCCceEEEEccCCCCC--CCCCHHHHHHHh-------cCccEEEEcCccCC-----C----cccHHHHHHHHHHHHHHH
Q psy7538 95 SILQKIQVISGDITQLK--LGISEIDKKELI-------DNVDIVYHVAATIR-----F----DEPIKTAVILNTRGTRDM 156 (543)
Q Consensus 95 ~~~~~v~~i~gDl~~~~--lgls~~~~~~l~-------~~vd~ViH~AA~v~-----~----~~~~~~~~~~Nv~gt~~l 156 (543)
......+-+..|+.+.. -.+++++++.++ .++|++||+||... + .+.++..+++|+.|+.++
T Consensus 80 ~d~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l 159 (299)
T PRK06300 80 ASFDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSL 159 (299)
T ss_pred hhcCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHH
Confidence 00011222333333310 011222333333 35899999997531 2 134567899999999999
Q ss_pred HHHHHh-ccCCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHH
Q psy7538 157 LELSKQ-MKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGL 235 (543)
Q Consensus 157 l~~a~~-~~~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~ 235 (543)
.+++.. +..-.++|.+||..+..... . +...|+.||+..+.+
T Consensus 160 ~~a~~p~m~~~G~ii~iss~~~~~~~p----------~---------------------------~~~~Y~asKaAl~~l 202 (299)
T PRK06300 160 LSHFGPIMNPGGSTISLTYLASMRAVP----------G---------------------------YGGGMSSAKAALESD 202 (299)
T ss_pred HHHHHHHhhcCCeEEEEeehhhcCcCC----------C---------------------------ccHHHHHHHHHHHHH
Confidence 988865 22225788898864432110 0 002699999999888
Q ss_pred HHHHhh-----cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHH
Q psy7538 236 VAECME-----LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLF 310 (543)
Q Consensus 236 v~~~~~-----~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a 310 (543)
.+..+. +|+.+..+.|+.|-.+... ....+........... ........+|+++++..+
T Consensus 203 t~~la~el~~~~gIrVn~V~PG~v~T~~~~-------~~~~~~~~~~~~~~~~---------p~~r~~~peevA~~v~~L 266 (299)
T PRK06300 203 TKVLAWEAGRRWGIRVNTISAGPLASRAGK-------AIGFIERMVDYYQDWA---------PLPEPMEAEQVGAAAAFL 266 (299)
T ss_pred HHHHHHHhCCCCCeEEEEEEeCCccChhhh-------cccccHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHH
Confidence 876554 2789999999877443211 0000011111111100 011245679999998877
Q ss_pred hhhhcccCCCCCCcEEEeecC
Q psy7538 311 TWDFLNSKESERKSVCNLTSN 331 (543)
Q Consensus 311 ~~~~~~~~~~~~~~vyni~s~ 331 (543)
+..... ...++++.+.++
T Consensus 267 ~s~~~~---~itG~~i~vdGG 284 (299)
T PRK06300 267 VSPLAS---AITGETLYVDHG 284 (299)
T ss_pred hCcccc---CCCCCEEEECCC
Confidence 654322 124667766544
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.68 E-value=3.2e-07 Score=92.97 Aligned_cols=125 Identities=13% Similarity=0.044 Sum_probs=89.5
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
..++++|.|||++|.||+.++..|...+ ...++.++++.+....+ ..+. +.... ....+
T Consensus 5 ~~~~~KI~IiGaaG~VGs~~a~~l~~~~-~~~elvL~Di~~~~g~a-~Dl~-----------------~~~~~--~~v~~ 63 (321)
T PTZ00325 5 ALKMFKVAVLGAAGGIGQPLSLLLKQNP-HVSELSLYDIVGAPGVA-ADLS-----------------HIDTP--AKVTG 63 (321)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHhcCC-CCCEEEEEecCCCcccc-cchh-----------------hcCcC--ceEEE
Confidence 4577899999999999999999888654 33478888883211100 0111 11112 22335
Q ss_pred CCCCCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCcccc
Q psy7538 107 ITQLKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHP 179 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~ 179 (543)
.++++ +....++++|+|+|+||..+- .++..+.+..|+.+++++++.+++. +++++|.++|..+..
T Consensus 64 ~td~~------~~~~~l~gaDvVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~-~~~~iviv~SNPvdv 130 (321)
T PTZ00325 64 YADGE------LWEKALRGADLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASS-APKAIVGIVSNPVNS 130 (321)
T ss_pred ecCCC------chHHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecCcHHH
Confidence 55543 445677899999999998654 3566788999999999999999998 899999999985543
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.65 E-value=2.1e-07 Score=94.43 Aligned_cols=183 Identities=12% Similarity=-0.003 Sum_probs=117.7
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
.++|.||||+|.||+.++..|...+ -..++.++++.. .. .+ ..++. +..... ...++++
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~-~~~el~L~Di~~-~~-g~--a~Dl~--------------~~~~~~--~i~~~~~ 76 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNP-LVSELHLYDIAN-TP-GV--AADVS--------------HINTPA--QVRGFLG 76 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC-CCCEEEEEecCC-CC-ee--Echhh--------------hCCcCc--eEEEEeC
Confidence 4699999999999999999888664 345788888765 11 00 00110 011111 1223322
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCcccccc
Q psy7538 110 LKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERT 188 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i~E~~ 188 (543)
.+ ++...++++|+|||+||..+- ..+..+.+..|+..++++.+.+++. +.+++|.++|--+......+.+-.
T Consensus 77 ~~------d~~~~l~~aDiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~-~p~aivivvSNPvD~~~~i~t~~~ 149 (323)
T PLN00106 77 DD------QLGDALKGADLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKH-CPNALVNIISNPVNSTVPIAAEVL 149 (323)
T ss_pred CC------CHHHHcCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEeCCCccccHHHHHHHH
Confidence 22 577788999999999998764 4567889999999999999999998 789999999853332111111000
Q ss_pred cC-CCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCC-CCCCCC
Q psy7538 189 YL-PPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYK-EPLPGW 265 (543)
Q Consensus 189 y~-~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~-~p~~gw 265 (543)
.. .+.+ | -+.|+.++...+++-...++ .+++..-++-.++.+.+. .-+|-|
T Consensus 150 ~~~s~~p--------------------~------~~viG~~~LDs~Rl~~~lA~~lgv~~~~V~~~ViGeHg~~s~vp~~ 203 (323)
T PLN00106 150 KKAGVYD--------------------P------KKLFGVTTLDVVRANTFVAEKKGLDPADVDVPVVGGHAGITILPLL 203 (323)
T ss_pred HHcCCCC--------------------c------ceEEEEecchHHHHHHHHHHHhCCChhheEEEEEEeCCCccEeeeh
Confidence 00 0011 1 15788888888887777766 688887786555544434 446655
Q ss_pred C
Q psy7538 266 T 266 (543)
Q Consensus 266 ~ 266 (543)
.
T Consensus 204 S 204 (323)
T PLN00106 204 S 204 (323)
T ss_pred h
Confidence 4
|
|
| >KOG1209|consensus | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.5e-07 Score=86.71 Aligned_cols=158 Identities=15% Similarity=0.175 Sum_probs=107.9
Q ss_pred CCCEEEEEcC-cchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 29 ENKSIFLSGG-SGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 29 ~~~~VlITGa-tGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
..+.|+|||+ +|-||-+|++++.+.|+ .|++..|+.. ++.++ ....++.+...|+
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~---~V~AtaR~~e------~M~~L---------------~~~~gl~~~kLDV 61 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGY---LVYATARRLE------PMAQL---------------AIQFGLKPYKLDV 61 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCe---EEEEEccccc------hHhhH---------------HHhhCCeeEEecc
Confidence 4578999976 68999999999999997 8999999753 23222 1124688899999
Q ss_pred CCCCCCCCHHHHHHHhc--------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc--cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID--------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM--KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~--------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~l~~~V 170 (543)
++++ ++..... ..|+.++.||..-. .+..+..+++|+.|..++.++...+ +.-..+|
T Consensus 62 ~~~~------~V~~v~~evr~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIV 135 (289)
T KOG1209|consen 62 SKPE------EVVTVSGEVRANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIV 135 (289)
T ss_pred CChH------HHHHHHHHHhhCCCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEE
Confidence 9986 4443322 36999999986421 2445678999999988877766543 2235899
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++.|..+..+ - +|-..|..||++-..+.+..+- .|+++
T Consensus 136 nvgSl~~~vp----------f----------------------------pf~~iYsAsKAAihay~~tLrlEl~PFgv~V 177 (289)
T KOG1209|consen 136 NVGSLAGVVP----------F----------------------------PFGSIYSASKAAIHAYARTLRLELKPFGVRV 177 (289)
T ss_pred EecceeEEec----------c----------------------------chhhhhhHHHHHHHHhhhhcEEeeeccccEE
Confidence 9999855432 1 2337999999876665544332 35555
Q ss_pred EEEecCee
Q psy7538 247 MILRPSIV 254 (543)
Q Consensus 247 ~IlRps~V 254 (543)
+.+-+|.|
T Consensus 178 in~itGGv 185 (289)
T KOG1209|consen 178 INAITGGV 185 (289)
T ss_pred EEecccce
Confidence 55555544
|
|
| >KOG1207|consensus | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.9e-07 Score=83.40 Aligned_cols=208 Identities=15% Similarity=0.207 Sum_probs=137.0
Q ss_pred hhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 26 KTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 26 ~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
.++.|+.|++||+.--||+.++..|.+.|. +|.+..|.. +.|..+. .+ ...-++++.+
T Consensus 3 t~laG~~vlvTgagaGIG~~~v~~La~aGA---~ViAvaR~~------a~L~sLV---------~e----~p~~I~Pi~~ 60 (245)
T KOG1207|consen 3 TSLAGVIVLVTGAGAGIGKEIVLSLAKAGA---QVIAVARNE------ANLLSLV---------KE----TPSLIIPIVG 60 (245)
T ss_pred ccccceEEEeecccccccHHHHHHHHhcCC---EEEEEecCH------HHHHHHH---------hh----CCcceeeeEe
Confidence 467899999999999999999999999986 899999975 3333321 11 1234899999
Q ss_pred cCCCCCCCCCHHHHHHHhcC---ccEEEEcCccCC---C----cccHHHHHHHHHHHHHHHHHHHHhc----cCCceEEE
Q psy7538 106 DITQLKLGISEIDKKELIDN---VDIVYHVAATIR---F----DEPIKTAVILNTRGTRDMLELSKQM----KNLKCFTY 171 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~~---vd~ViH~AA~v~---~----~~~~~~~~~~Nv~gt~~ll~~a~~~----~~l~~~V~ 171 (543)
|++..+ .+.+++.. +|..++.||..- | .++.+..+++|+++..++.++..+. .....+|.
T Consensus 61 Dls~we------a~~~~l~~v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVN 134 (245)
T KOG1207|consen 61 DLSAWE------ALFKLLVPVFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVN 134 (245)
T ss_pred cccHHH------HHHHhhcccCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEE
Confidence 999743 45555543 688999888532 2 2344556888999988888774331 12347999
Q ss_pred EecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEE
Q psy7538 172 ISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCM 247 (543)
Q Consensus 172 vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~ 247 (543)
+||..+.-.-. .. +.|..||+.-+.+.+..+- +.+++.
T Consensus 135 vSSqas~R~~~------------nH--------------------------tvYcatKaALDmlTk~lAlELGp~kIRVN 176 (245)
T KOG1207|consen 135 VSSQASIRPLD------------NH--------------------------TVYCATKAALDMLTKCLALELGPQKIRVN 176 (245)
T ss_pred ecchhcccccC------------Cc--------------------------eEEeecHHHHHHHHHHHHHhhCcceeEee
Confidence 99985532211 11 6899999988887766543 578888
Q ss_pred EEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhc
Q psy7538 248 ILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFL 315 (543)
Q Consensus 248 IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~ 315 (543)
.+-|..|.-.... ..|.|-.. ++.. . +.-..--|.-||.|+||++..+.+..
T Consensus 177 sVNPTVVmT~MG~--dnWSDP~K----------~k~m---L-~riPl~rFaEV~eVVnA~lfLLSd~s 228 (245)
T KOG1207|consen 177 SVNPTVVMTDMGR--DNWSDPDK----------KKKM---L-DRIPLKRFAEVDEVVNAVLFLLSDNS 228 (245)
T ss_pred ccCCeEEEecccc--cccCCchh----------ccch---h-hhCchhhhhHHHHHHhhheeeeecCc
Confidence 8999988754321 23444211 1100 0 01112346778999999887765543
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=7e-07 Score=82.93 Aligned_cols=104 Identities=11% Similarity=0.134 Sum_probs=73.0
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+++|||||||+|. ++++|.+.|+ +|.+..|++. +.+++.. .+ +. ..++.++.+|++++
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~G~---~V~v~~R~~~------~~~~l~~-----~l-----~~-~~~i~~~~~Dv~d~ 59 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEKGF---HVSVIARREV------KLENVKR-----ES-----TT-PESITPLPLDYHDD 59 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHCcC---EEEEEECCHH------HHHHHHH-----Hh-----hc-CCcEEEEEccCCCH
Confidence 68999999999886 9999999987 7788888642 2222110 00 11 24688899999987
Q ss_pred CCCCCHHHHHHHhc-------CccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCc----eEEEEecCcc
Q psy7538 111 KLGISEIDKKELID-------NVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLK----CFTYISTAYC 177 (543)
Q Consensus 111 ~lgls~~~~~~l~~-------~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~----~~V~vST~y~ 177 (543)
+ ++..+++ .+|++|+.+ .+.++.++.++|++. +++ +|+|+=.+.+
T Consensus 60 ~------sv~~~i~~~l~~~g~id~lv~~v---------------h~~~~~~~~~~~~~~-gv~~~~~~~~h~~gs~~ 115 (177)
T PRK08309 60 D------ALKLAIKSTIEKNGPFDLAVAWI---------------HSSAKDALSVVCREL-DGSSETYRLFHVLGSAA 115 (177)
T ss_pred H------HHHHHHHHHHHHcCCCeEEEEec---------------cccchhhHHHHHHHH-ccCCCCceEEEEeCCcC
Confidence 6 5665554 356666543 334678899999998 888 8999875533
|
|
| >KOG1014|consensus | Back alignment and domain information |
|---|
Probab=98.39 E-value=3.6e-06 Score=82.74 Aligned_cols=169 Identities=14% Similarity=0.143 Sum_probs=113.7
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
+=..|||||.-|||..+++|.++|. +|+++.|.. +||+..-+ .+.+ ...-.+..+..|.+++
T Consensus 50 ~WAVVTGaTDGIGKayA~eLAkrG~---nvvLIsRt~------~KL~~v~k-----EI~~----~~~vev~~i~~Dft~~ 111 (312)
T KOG1014|consen 50 SWAVVTGATDGIGKAYARELAKRGF---NVVLISRTQ------EKLEAVAK-----EIEE----KYKVEVRIIAIDFTKG 111 (312)
T ss_pred CEEEEECCCCcchHHHHHHHHHcCC---EEEEEeCCH------HHHHHHHH-----HHHH----HhCcEEEEEEEecCCC
Confidence 6788999999999999999999987 799999985 34432211 1111 1124688999999998
Q ss_pred CCCCCHHHHHHHhcC--ccEEEEcCccCCC---------cccHHHHHHHHHHHHHHHHHHHHh-c--cCCceEEEEecCc
Q psy7538 111 KLGISEIDKKELIDN--VDIVYHVAATIRF---------DEPIKTAVILNTRGTRDMLELSKQ-M--KNLKCFTYISTAY 176 (543)
Q Consensus 111 ~lgls~~~~~~l~~~--vd~ViH~AA~v~~---------~~~~~~~~~~Nv~gt~~ll~~a~~-~--~~l~~~V~vST~y 176 (543)
+- ..+.+...+++ +-++|+++|.... ++.++..+.+|+.++..+.+.... | ++-..+|++||..
T Consensus 112 ~~--~ye~i~~~l~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~a 189 (312)
T KOG1014|consen 112 DE--VYEKLLEKLAGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFA 189 (312)
T ss_pred ch--hHHHHHHHhcCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecccc
Confidence 72 23445555554 6799999997641 113345677899887777665532 1 2446889999985
Q ss_pred cccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEEEecC
Q psy7538 177 CHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMILRPS 252 (543)
Q Consensus 177 ~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~IlRps 252 (543)
+.-+. |. ...|+.||+..+.+-....+ +|+-+-.+=|.
T Consensus 190 g~~p~----------p~----------------------------~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~ 231 (312)
T KOG1014|consen 190 GLIPT----------PL----------------------------LSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPY 231 (312)
T ss_pred ccccC----------hh----------------------------HHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehh
Confidence 53221 11 16899999876665544332 68888888888
Q ss_pred eeeec
Q psy7538 253 IVVPI 257 (543)
Q Consensus 253 ~V~G~ 257 (543)
.|-+.
T Consensus 232 ~VaTk 236 (312)
T KOG1014|consen 232 LVATK 236 (312)
T ss_pred heecc
Confidence 77655
|
|
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.38 E-value=7.6e-07 Score=86.07 Aligned_cols=83 Identities=19% Similarity=0.326 Sum_probs=55.1
Q ss_pred cCCCEEEEEcCc----------------chhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhh
Q psy7538 28 YENKSIFLSGGS----------------GFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTL 91 (543)
Q Consensus 28 ~~~~~VlITGat----------------GFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~ 91 (543)
++||+|+||+|. ||+|++|++.|+++|+ +|+++.+...+.... +
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga---~V~li~g~~~~~~~~--~--------------- 60 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGA---HVIYLHGYFAEKPND--I--------------- 60 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCC---eEEEEeCCCcCCCcc--c---------------
Confidence 479999999885 9999999999999998 677776543211000 0
Q ss_pred cCcCCCCceEEEEccCCCCCCCCCHHHHHHHhc--CccEEEEcCccCCCc
Q psy7538 92 RGKSILQKIQVISGDITQLKLGISEIDKKELID--NVDIVYHVAATIRFD 139 (543)
Q Consensus 92 ~~~~~~~~v~~i~gDl~~~~lgls~~~~~~l~~--~vd~ViH~AA~v~~~ 139 (543)
+. ..++..+.+|.... +.+..+++ ++|+|||+||...|.
T Consensus 61 --~~-~~~~~~V~s~~d~~------~~l~~~~~~~~~D~VIH~AAvsD~~ 101 (229)
T PRK09620 61 --NN-QLELHPFEGIIDLQ------DKMKSIITHEKVDAVIMAAAGSDWV 101 (229)
T ss_pred --CC-ceeEEEEecHHHHH------HHHHHHhcccCCCEEEECcccccee
Confidence 10 12344556632221 14666664 689999999997764
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.35 E-value=5.8e-06 Score=76.27 Aligned_cols=125 Identities=15% Similarity=0.194 Sum_probs=77.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++++.++||||+|.||..+++.|.+.|. +|++..|+... .++-.++ +. ....+..++.+|+
T Consensus 14 l~gk~~lVTGa~~GIG~aia~~l~~~G~---~V~l~~r~~~~--~~~~~~~---------l~-----~~~~~~~~~~~Dl 74 (169)
T PRK06720 14 LAGKVAIVTGGGIGIGRNTALLLAKQGA---KVIVTDIDQES--GQATVEE---------IT-----NLGGEALFVSYDM 74 (169)
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHCCC---EEEEEECCHHH--HHHHHHH---------HH-----hcCCcEEEEEccC
Confidence 6899999999999999999999999986 78888876421 1111111 11 1123566789999
Q ss_pred CCCCCCCCHHHHHHHh-------cCccEEEEcCccCCC----cc-cHHHHHHHHHHHHHHHHHHHH----hc------cC
Q psy7538 108 TQLKLGISEIDKKELI-------DNVDIVYHVAATIRF----DE-PIKTAVILNTRGTRDMLELSK----QM------KN 165 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~----~~-~~~~~~~~Nv~gt~~ll~~a~----~~------~~ 165 (543)
++++ +++.++ .++|++||+||.... ++ +......+|+.++......+. +. ..
T Consensus 75 ~~~~------~v~~~v~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (169)
T PRK06720 75 EKQG------DWQRVISITLNAFSRIDMLFQNAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQLTSSFMKQQEEVVLSD 148 (169)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccccchhHhhceeccHHHHHHHHHHHHHHhcCCEEEeec
Confidence 9865 454433 358999999996532 22 222222444554433332222 11 13
Q ss_pred CceEEEEecCcc
Q psy7538 166 LKCFTYISTAYC 177 (543)
Q Consensus 166 l~~~V~vST~y~ 177 (543)
..+|-.+||...
T Consensus 149 ~~~~~~~~~~~~ 160 (169)
T PRK06720 149 LPIFGIIGTKGQ 160 (169)
T ss_pred CceeeEeccccc
Confidence 568888888744
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=98.32 E-value=7.3e-06 Score=83.65 Aligned_cols=118 Identities=16% Similarity=0.117 Sum_probs=75.1
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCC----CcCEEEEEecCCCCCCHHH-HHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEP----NVKKIYLLMRTKKGKTPNQ-RVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~----~v~~V~~l~R~~~~~~~~~-rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
.+|+||||+|++|++++..|+..+- .-.+|++++|+........ .+ ++ .+-..+..+
T Consensus 3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~-Dl-----------------~d~~~~~~~ 64 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVM-EL-----------------QDCAFPLLK 64 (325)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceee-eh-----------------hhccccccC
Confidence 5799999999999999999988641 0127999998653110000 00 00 000001122
Q ss_pred cCCCCCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEE
Q psy7538 106 DITQLKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYI 172 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~v 172 (543)
|+... .++.+.++++|+|||+||..+. .++..+.++.|+.-.+.+.+...++.....++.+
T Consensus 65 ~~~~~------~~~~~~l~~aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiiv 126 (325)
T cd01336 65 SVVAT------TDPEEAFKDVDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLV 126 (325)
T ss_pred Cceec------CCHHHHhCCCCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEE
Confidence 33222 2566777899999999998764 4556778999999999998888776222443333
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=98.15 E-value=8.9e-06 Score=78.87 Aligned_cols=95 Identities=15% Similarity=0.206 Sum_probs=58.5
Q ss_pred cCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCCCCCCCH
Q psy7538 37 GGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQLKLGISE 116 (543)
Q Consensus 37 GatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~~lgls~ 116 (543)
.+|||+|.+|++.|+++|+ +|.++.|+.... +....++.++..+-.+.. .
T Consensus 23 ~SSG~iG~aLA~~L~~~G~---~V~li~r~~~~~-----------------------~~~~~~v~~i~v~s~~~m----~ 72 (229)
T PRK06732 23 HSTGQLGKIIAETFLAAGH---EVTLVTTKTAVK-----------------------PEPHPNLSIIEIENVDDL----L 72 (229)
T ss_pred ccchHHHHHHHHHHHhCCC---EEEEEECccccc-----------------------CCCCCCeEEEEEecHHHH----H
Confidence 5699999999999999997 788887754211 111235556554322210 1
Q ss_pred HHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHh
Q psy7538 117 IDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQ 162 (543)
Q Consensus 117 ~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~ 162 (543)
+.+...++++|+|||+||...+.. ....-..+...+.++.+++++
T Consensus 73 ~~l~~~~~~~DivIh~AAvsd~~~-~~~~~~~~~~~~~~v~~~~~~ 117 (229)
T PRK06732 73 ETLEPLVKDHDVLIHSMAVSDYTP-VYMTDLEEVSASDNLNEFLTK 117 (229)
T ss_pred HHHHHHhcCCCEEEeCCccCCcee-hhhhhhhhhhhhhhhhhhhcc
Confidence 234556678999999999876532 222223345555666666654
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.09 E-value=5.2e-06 Score=84.43 Aligned_cols=80 Identities=21% Similarity=0.325 Sum_probs=56.1
Q ss_pred hhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEE
Q psy7538 24 IAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVI 103 (543)
Q Consensus 24 i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i 103 (543)
+...+++++|+||||||+||+.++++|++.+ ++++|+++.|+. +|+.++.+ . +.
T Consensus 149 lg~~l~~k~VLVtGAtG~IGs~lar~L~~~~-gv~~lilv~R~~------~rl~~La~-----------------e--l~ 202 (340)
T PRK14982 149 LGIDLSKATVAVVGATGDIGSAVCRWLDAKT-GVAELLLVARQQ------ERLQELQA-----------------E--LG 202 (340)
T ss_pred hccCcCCCEEEEEccChHHHHHHHHHHHhhC-CCCEEEEEcCCH------HHHHHHHH-----------------H--hc
Confidence 3346889999999999999999999998652 346888888863 24433210 0 11
Q ss_pred EccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCC
Q psy7538 104 SGDITQLKLGISEIDKKELIDNVDIVYHVAATIRF 138 (543)
Q Consensus 104 ~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~ 138 (543)
.+|+. ++...+.++|+|||+|+....
T Consensus 203 ~~~i~---------~l~~~l~~aDiVv~~ts~~~~ 228 (340)
T PRK14982 203 GGKIL---------SLEEALPEADIVVWVASMPKG 228 (340)
T ss_pred cccHH---------hHHHHHccCCEEEECCcCCcC
Confidence 13332 356778899999999997653
|
|
| >KOG1204|consensus | Back alignment and domain information |
|---|
Probab=98.00 E-value=5.8e-05 Score=70.87 Aligned_cols=157 Identities=20% Similarity=0.168 Sum_probs=102.9
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEE-----
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVI----- 103 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i----- 103 (543)
.++.+|+||++--||.-++..++..+-+. .+++..|.... .+++...
T Consensus 5 ~r~villTGaSrgiG~~~v~~i~aed~e~-~r~g~~r~~a~---------------------------~~~L~v~~gd~~ 56 (253)
T KOG1204|consen 5 MRKVILLTGASRGIGTGSVATILAEDDEA-LRYGVARLLAE---------------------------LEGLKVAYGDDF 56 (253)
T ss_pred cceEEEEecCCCCccHHHHHHHHhcchHH-HHHhhhccccc---------------------------ccceEEEecCCc
Confidence 46789999999999999999998876433 33443443321 2233333
Q ss_pred ---EccCCCCCCCCCHHHHHHHhc----CccEEEEcCccCCC----------cccHHHHHHHHHHHHHHHHHHHHhc-cC
Q psy7538 104 ---SGDITQLKLGISEIDKKELID----NVDIVYHVAATIRF----------DEPIKTAVILNTRGTRDMLELSKQM-KN 165 (543)
Q Consensus 104 ---~gDl~~~~lgls~~~~~~l~~----~vd~ViH~AA~v~~----------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~ 165 (543)
.||+++..+ -+++.++.+ +-|+|||.||.... ...++..++.|+.+...|...+... ++
T Consensus 57 v~~~g~~~e~~~---l~al~e~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~ 133 (253)
T KOG1204|consen 57 VHVVGDITEEQL---LGALREAPRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKK 133 (253)
T ss_pred ceechHHHHHHH---HHHHHhhhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcC
Confidence 344443320 012222222 36999999997531 2346778999999988887776542 22
Q ss_pred ---CceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-
Q psy7538 166 ---LKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME- 241 (543)
Q Consensus 166 ---l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~- 241 (543)
-+-+|++||..+.-+-. ....|+.+|++-+++.+..+.
T Consensus 134 ~p~~~~vVnvSS~aav~p~~--------------------------------------~wa~yc~~KaAr~m~f~~lA~E 175 (253)
T KOG1204|consen 134 SPVNGNVVNVSSLAAVRPFS--------------------------------------SWAAYCSSKAARNMYFMVLASE 175 (253)
T ss_pred CCccCeEEEecchhhhcccc--------------------------------------HHHHhhhhHHHHHHHHHHHhhc
Confidence 26789999986543211 116899999999999887665
Q ss_pred --cCCcEEEEecCee
Q psy7538 242 --LGMPCMILRPSIV 254 (543)
Q Consensus 242 --~~lp~~IlRps~V 254 (543)
.++.+..++||.|
T Consensus 176 Ep~~v~vl~~aPGvv 190 (253)
T KOG1204|consen 176 EPFDVRVLNYAPGVV 190 (253)
T ss_pred CccceeEEEccCCcc
Confidence 3788889999876
|
|
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.97 E-value=7.3e-05 Score=76.19 Aligned_cols=176 Identities=14% Similarity=0.084 Sum_probs=108.1
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcC-----EEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEE
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVK-----KIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVIS 104 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~-----~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~ 104 (543)
.++|.|+||+|++|..++..|+..+. .. ++.++++.+....+.....++.+.. .....++.+.
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~-~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~----------~~~~~~~~i~- 69 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEM-FGPDQPVILQLLELPQALKALEGVAMELEDCA----------FPLLAEIVIT- 69 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccc-cCCCCceEEEEEecCCcccccceeehhhhhcc----------ccccCceEEe-
Confidence 46899999999999999999987642 33 7888887542211111111111100 0001122221
Q ss_pred ccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCc
Q psy7538 105 GDITQLKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKV 183 (543)
Q Consensus 105 gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~ 183 (543)
+ +....++++|+||.+|+..+- .++..+.++.|+.-.+.+.+...+......++.+-|--++.
T Consensus 70 ~------------~~~~~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~---- 133 (322)
T cd01338 70 D------------DPNVAFKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNT---- 133 (322)
T ss_pred c------------CcHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHH----
Confidence 1 122445899999999998653 35566789999999999999998872124444444411100
Q ss_pred ccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCC--CchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCC
Q psy7538 184 LEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEF--PNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYK 259 (543)
Q Consensus 184 i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~--pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~ 259 (543)
+. ....+..+++ ...|+.|+...+++-...++ .+++...+|..+|+|+..
T Consensus 134 ---------------~t-----------~~~~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG 186 (322)
T cd01338 134 ---------------NA-----------LIAMKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHS 186 (322)
T ss_pred ---------------HH-----------HHHHHHcCCCChHheEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCc
Confidence 00 0000001001 15888899999999888887 789999999999999864
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >KOG1199|consensus | Back alignment and domain information |
|---|
Probab=97.96 E-value=5.4e-06 Score=73.99 Aligned_cols=105 Identities=20% Similarity=0.277 Sum_probs=78.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCC-CHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGK-TPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~-~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
-+|-..+||||..-+|+..+|.|...|. .|.+++-+.++- +.. .+...++.+...|
T Consensus 7 ~kglvalvtggasglg~ataerlakqga---sv~lldlp~skg~~va--------------------kelg~~~vf~pad 63 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQGA---SVALLDLPQSKGADVA--------------------KELGGKVVFTPAD 63 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhcCc---eEEEEeCCcccchHHH--------------------HHhCCceEEeccc
Confidence 4677899999999999999999999986 677777665432 211 2234688999999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CccEEEEcCccC------CC-------cccHHHHHHHHHHHHHHHHHHHH
Q psy7538 107 ITQLKLGISEIDKKELID-------NVDIVYHVAATI------RF-------DEPIKTAVILNTRGTRDMLELSK 161 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v------~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 161 (543)
++.+. |++..+. ..|+.++||+.. ++ -|+.+..+++|+.||.|++++..
T Consensus 64 vtsek------dv~aala~ak~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~a 132 (260)
T KOG1199|consen 64 VTSEK------DVRAALAKAKAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGA 132 (260)
T ss_pred cCcHH------HHHHHHHHHHhhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehh
Confidence 99654 6666543 589999999853 11 24455678899999999988754
|
|
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00015 Score=73.60 Aligned_cols=118 Identities=18% Similarity=0.130 Sum_probs=79.6
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|+|.||||.+|++++..|.........+.++.|++.. .. +-+ ++ .+. +....+.+ .+.
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~-~g-~al-Dl--------------~~~-~~~~~i~~--~~~ 60 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVT-PG-VAV-DL--------------SHI-PTAVKIKG--FSG 60 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCC-cc-eeh-hh--------------hcC-CCCceEEE--eCC
Confidence 689999999999999999886533333467777776431 10 000 11 000 11112223 111
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecC
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTA 175 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~ 175 (543)
+++...++++|+||-+|+..+- .++..+.+..|...++++++..++. +.+++|.+.|=
T Consensus 61 ------~d~~~~l~~~DiVIitaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~-~~~~ivivvsN 119 (312)
T PRK05086 61 ------EDPTPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKT-CPKACIGIITN 119 (312)
T ss_pred ------CCHHHHcCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEccC
Confidence 2455666899999999998653 3455678999999999999999998 88999988874
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.79 E-value=7.6e-05 Score=76.98 Aligned_cols=91 Identities=21% Similarity=0.295 Sum_probs=71.6
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+|+|+|.|| |++|+.++.+|.+++- .+|++.+|++.. .+|+.+ ....+++.+..|+.+
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d--~~V~iAdRs~~~---~~~i~~----------------~~~~~v~~~~vD~~d 58 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGD--GEVTIADRSKEK---CARIAE----------------LIGGKVEALQVDAAD 58 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCC--ceEEEEeCCHHH---HHHHHh----------------hccccceeEEecccC
Confidence 478999998 9999999999999973 599999998643 223321 123489999999999
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhc
Q psy7538 110 LKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQM 163 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~ 163 (543)
.+ .+.+++++.|+|||++.... +.+++++|.+.
T Consensus 59 ~~------al~~li~~~d~VIn~~p~~~---------------~~~i~ka~i~~ 91 (389)
T COG1748 59 VD------ALVALIKDFDLVINAAPPFV---------------DLTILKACIKT 91 (389)
T ss_pred hH------HHHHHHhcCCEEEEeCCchh---------------hHHHHHHHHHh
Confidence 86 79999999999999986421 13688899987
|
|
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=97.78 E-value=4.1e-05 Score=80.07 Aligned_cols=77 Identities=18% Similarity=0.260 Sum_probs=55.7
Q ss_pred hcCCCEEEEEcC----------------cchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHh
Q psy7538 27 TYENKSIFLSGG----------------SGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKT 90 (543)
Q Consensus 27 ~~~~~~VlITGa----------------tGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~ 90 (543)
-++||+|+|||| ||.+|.++++.|.+.|. +|+++.++.....
T Consensus 185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga---~V~~v~~~~~~~~------------------- 242 (399)
T PRK05579 185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGA---DVTLVSGPVNLPT------------------- 242 (399)
T ss_pred ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCC---EEEEeCCCccccC-------------------
Confidence 368999999999 99999999999999997 7788877642100
Q ss_pred hcCcCCCCceEEEEccCCCCCCCCCHHHHHHHh----cCccEEEEcCccCCCc
Q psy7538 91 LRGKSILQKIQVISGDITQLKLGISEIDKKELI----DNVDIVYHVAATIRFD 139 (543)
Q Consensus 91 ~~~~~~~~~v~~i~gDl~~~~lgls~~~~~~l~----~~vd~ViH~AA~v~~~ 139 (543)
+ ..+ ...|+++.+ ++...+ .++|++||+||...+.
T Consensus 243 ---~---~~~--~~~dv~~~~------~~~~~v~~~~~~~DilI~~Aav~d~~ 281 (399)
T PRK05579 243 ---P---AGV--KRIDVESAQ------EMLDAVLAALPQADIFIMAAAVADYR 281 (399)
T ss_pred ---C---CCc--EEEccCCHH------HHHHHHHHhcCCCCEEEEcccccccc
Confidence 1 122 245777643 444443 4689999999987653
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.0018 Score=66.81 Aligned_cols=85 Identities=18% Similarity=0.178 Sum_probs=55.9
Q ss_pred CCCEEEEEcCcchhHHH--HHHHHHhhCCCcCEEEEEecCCCCCC---------HHHHHHHHhcCchhHHHHhhcCcCCC
Q psy7538 29 ENKSIFLSGGSGFLGKV--LIEKILRLEPNVKKIYLLMRTKKGKT---------PNQRVEELFESPVFDALKTLRGKSIL 97 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~--Lv~~Ll~~g~~v~~V~~l~R~~~~~~---------~~~rl~~~~~~~~f~~l~~~~~~~~~ 97 (543)
.+|++|||||++-+|.+ +++.| +.|. .|.++.+.+.... ..+.+++.. + ...
T Consensus 40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA---~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a---------~----~~G 102 (398)
T PRK13656 40 GPKKVLVIGASSGYGLASRIAAAF-GAGA---DTLGVFFEKPGTEKKTGTAGWYNSAAFDKFA---------K----AAG 102 (398)
T ss_pred CCCEEEEECCCchHhHHHHHHHHH-HcCC---eEEEEecCcchhhhcccccccchHHHHHHHH---------H----hcC
Confidence 46999999999999999 89999 8886 5666765321110 111222211 1 112
Q ss_pred CceEEEEccCCCCCCCCCHHHHHHHh-------cCccEEEEcCccC
Q psy7538 98 QKIQVISGDITQLKLGISEIDKKELI-------DNVDIVYHVAATI 136 (543)
Q Consensus 98 ~~v~~i~gDl~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v 136 (543)
..+..+.+|+++++ +++.++ .++|+++|++|..
T Consensus 103 ~~a~~i~~DVss~E------~v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 103 LYAKSINGDAFSDE------IKQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHhcCCCCEEEECCccC
Confidence 34667899999875 444443 3589999999976
|
|
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.0007 Score=69.05 Aligned_cols=112 Identities=15% Similarity=0.139 Sum_probs=74.0
Q ss_pred EEEEEcCcchhHHHHHHHHHhhCCCcC-----EEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 32 SIFLSGGSGFLGKVLIEKILRLEPNVK-----KIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 32 ~VlITGatGFiG~~Lv~~Ll~~g~~v~-----~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
+|.||||+|.+|+.++..|...+. +. .+.++++.+.. ++.+....|
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~-~~~~~~~~l~L~Di~~~~----------------------------~~~~g~~~D 52 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGEL-FGDDQPVILHLLDIPPAM----------------------------KALEGVVME 52 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCc-cCCCCceEEEEEecCCcc----------------------------Cccceeeee
Confidence 799999999999999998887642 22 48888876411 112223334
Q ss_pred CCCCCCCCCH-----HHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEE
Q psy7538 107 ITQLKLGISE-----IDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYI 172 (543)
Q Consensus 107 l~~~~lgls~-----~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~v 172 (543)
+.+....+.. .+....++++|+|+|+||..+- .++..+.+..|+.-.+++....++..+...++.+
T Consensus 53 l~d~~~~~~~~~~i~~~~~~~~~~aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiiv 124 (323)
T cd00704 53 LQDCAFPLLKGVVITTDPEEAFKDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLV 124 (323)
T ss_pred hhhhcccccCCcEEecChHHHhCCCCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEE
Confidence 4433100000 1344667899999999998653 3566778999999999999888887223444433
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00026 Score=74.43 Aligned_cols=90 Identities=18% Similarity=0.330 Sum_probs=64.3
Q ss_pred EEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCCCC
Q psy7538 33 IFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQLKL 112 (543)
Q Consensus 33 VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~~l 112 (543)
|+|.|| |++|+.+++.|++.+ +..+|.+..|+. ++++++.+. ....++..+..|+.+++
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~-~~~~v~va~r~~------~~~~~~~~~------------~~~~~~~~~~~d~~~~~- 59 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRG-PFEEVTVADRNP------EKAERLAEK------------LLGDRVEAVQVDVNDPE- 59 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTT-CE-EEEEEESSH------HHHHHHHT--------------TTTTEEEEE--TTTHH-
T ss_pred CEEEcC-cHHHHHHHHHHhcCC-CCCcEEEEECCH------HHHHHHHhh------------ccccceeEEEEecCCHH-
Confidence 789999 999999999999985 444899999975 344333211 03468999999999875
Q ss_pred CCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhc
Q psy7538 113 GISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQM 163 (543)
Q Consensus 113 gls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~ 163 (543)
++.++++++|+||||++.. + ...++++|.+.
T Consensus 60 -----~l~~~~~~~dvVin~~gp~-~--------------~~~v~~~~i~~ 90 (386)
T PF03435_consen 60 -----SLAELLRGCDVVINCAGPF-F--------------GEPVARACIEA 90 (386)
T ss_dssp -----HHHHHHTTSSEEEE-SSGG-G--------------HHHHHHHHHHH
T ss_pred -----HHHHHHhcCCEEEECCccc-h--------------hHHHHHHHHHh
Confidence 7999999999999999864 1 13578889887
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >KOG2733|consensus | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00032 Score=70.02 Aligned_cols=90 Identities=17% Similarity=0.403 Sum_probs=63.9
Q ss_pred EEEEEcCcchhHHHHHHHHHhhC--CCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 32 SIFLSGGSGFLGKVLIEKILRLE--PNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 32 ~VlITGatGFiG~~Lv~~Ll~~g--~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
-+.|-|||||.|+.++|.+++++ .+. .+-+..|+. ++|++.++ .+.+..+++....+ ++.+|.+|
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~-slavAGRn~------~KL~~vL~-----~~~~k~~~~ls~~~-i~i~D~~n 73 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGL-SLAVAGRNE------KKLQEVLE-----KVGEKTGTDLSSSV-ILIADSAN 73 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCc-eEEEecCCH------HHHHHHHH-----HHhhccCCCcccce-EEEecCCC
Confidence 37899999999999999999942 122 566666763 45554332 22222213333344 88899999
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCccCCCcc
Q psy7538 110 LKLGISEIDKKELIDNVDIVYHVAATIRFDE 140 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~ 140 (543)
++ .+.++++.+.+|+||+|.-++-.
T Consensus 74 ~~------Sl~emak~~~vivN~vGPyR~hG 98 (423)
T KOG2733|consen 74 EA------SLDEMAKQARVIVNCVGPYRFHG 98 (423)
T ss_pred HH------HHHHHHhhhEEEEeccccceecC
Confidence 86 89999999999999999988753
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00031 Score=66.35 Aligned_cols=82 Identities=20% Similarity=0.278 Sum_probs=56.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++++++|+||||.+|+.+++.|.+.|. +|+++.|.. ++.+++. +.+... .+.....+|.
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~---~V~l~~R~~------~~~~~l~-----~~l~~~------~~~~~~~~~~ 85 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREGA---RVVLVGRDL------ERAQKAA-----DSLRAR------FGEGVGAVET 85 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEcCCH------HHHHHHH-----HHHHhh------cCCcEEEeeC
Confidence 5789999999999999999999999874 788888863 3333321 111111 1223444565
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCcc
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAAT 135 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~ 135 (543)
.+. +++...++++|+||++.+.
T Consensus 86 ~~~------~~~~~~~~~~diVi~at~~ 107 (194)
T cd01078 86 SDD------AARAAAIKGADVVFAAGAA 107 (194)
T ss_pred CCH------HHHHHHHhcCCEEEECCCC
Confidence 544 3677888999999997654
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00056 Score=67.22 Aligned_cols=94 Identities=14% Similarity=0.270 Sum_probs=63.1
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|||+||||. |+.|++.|.+.|+ +|++.+|+..+... ... .....+.++..+.
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~---~v~~s~~t~~~~~~---------------------~~~-~g~~~v~~g~l~~ 54 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGI---EILVTVTTSEGKHL---------------------YPI-HQALTVHTGALDP 54 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCC---eEEEEEccCCcccc---------------------ccc-cCCceEEECCCCH
Confidence 68999999999 9999999999986 78888888755321 001 1122333333333
Q ss_pred CCCCCHHHHHHHhc--CccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceE
Q psy7538 111 KLGISEIDKKELID--NVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCF 169 (543)
Q Consensus 111 ~lgls~~~~~~l~~--~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~ 169 (543)
+++..++. ++|+||+++.. +. ..-+.+..++|+++ ++..+
T Consensus 55 ------~~l~~~l~~~~i~~VIDAtHP------fA------~~is~~a~~a~~~~-~ipyl 96 (256)
T TIGR00715 55 ------QELREFLKRHSIDILVDATHP------FA------AQITTNATAVCKEL-GIPYV 96 (256)
T ss_pred ------HHHHHHHHhcCCCEEEEcCCH------HH------HHHHHHHHHHHHHh-CCcEE
Confidence 36766665 49999998743 21 12357788999998 66544
|
This enzyme was found to be a monomer by gel filtration. |
| >KOG1478|consensus | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0019 Score=61.72 Aligned_cols=187 Identities=15% Similarity=0.216 Sum_probs=111.3
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCC--cCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPN--VKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~--v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
.|.++|||++.-+|-+|+.+|++...+ +-.|.+..|+-+. +++-.+. |+.-+ |.....+.++..|+
T Consensus 3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~k--ae~vc~~---------lk~f~-p~~~i~~~yvlvD~ 70 (341)
T KOG1478|consen 3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSK--AEAVCAA---------LKAFH-PKSTIEVTYVLVDV 70 (341)
T ss_pred ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhH--HHHHHHH---------HHHhC-CCceeEEEEEEEeh
Confidence 478999999999999999999987533 1245555665432 2222222 22223 54456788999999
Q ss_pred CCCCCCCC-HHHHHHHhcCccEEEEcCccCCC----------------------------------cccHHHHHHHHHHH
Q psy7538 108 TQLKLGIS-EIDKKELIDNVDIVYHVAATIRF----------------------------------DEPIKTAVILNTRG 152 (543)
Q Consensus 108 ~~~~lgls-~~~~~~l~~~vd~ViH~AA~v~~----------------------------------~~~~~~~~~~Nv~g 152 (543)
++-..-+. ..|++.-+...|.|+-.||...+ .+.+...+++||.|
T Consensus 71 sNm~Sv~~A~~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFG 150 (341)
T KOG1478|consen 71 SNMQSVFRASKDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFG 150 (341)
T ss_pred hhHHHHHHHHHHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccc
Confidence 88541000 12344444568999988885422 12345678899999
Q ss_pred HHHHHHHHHhc---cCCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHH
Q psy7538 153 TRDMLELSKQM---KNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTK 229 (543)
Q Consensus 153 t~~ll~~a~~~---~~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK 229 (543)
..-++.-.... ..-..+|.+||.-+....- |-+.++...-+ .+|.-||
T Consensus 151 hfyli~~l~pll~~~~~~~lvwtSS~~a~kk~l-----------------------sleD~q~~kg~------~pY~sSK 201 (341)
T KOG1478|consen 151 HFYLIRELEPLLCHSDNPQLVWTSSRMARKKNL-----------------------SLEDFQHSKGK------EPYSSSK 201 (341)
T ss_pred hhhhHhhhhhHhhcCCCCeEEEEeecccccccC-----------------------CHHHHhhhcCC------CCcchhH
Confidence 77665543321 1223899999985533211 11112222211 5899999
Q ss_pred HHHHHHHHHHhh----cCCcEEEEecCeeeec
Q psy7538 230 CLAEGLVAECME----LGMPCMILRPSIVVPI 257 (543)
Q Consensus 230 ~~aE~~v~~~~~----~~lp~~IlRps~V~G~ 257 (543)
.+.+-+-....+ .|+.--++.|++-...
T Consensus 202 rl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~ 233 (341)
T KOG1478|consen 202 RLTDLLHVALNRNFKPLGINQYVVQPGIFTTN 233 (341)
T ss_pred HHHHHHHHHHhccccccchhhhcccCceeecc
Confidence 999876544433 3455566777765443
|
|
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0085 Score=56.71 Aligned_cols=111 Identities=19% Similarity=0.214 Sum_probs=70.5
Q ss_pred hhcCCCEEEEEcCcc--hhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEE
Q psy7538 26 KTYENKSIFLSGGSG--FLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVI 103 (543)
Q Consensus 26 ~~~~~~~VlITGatG--FiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i 103 (543)
-+++||++||+|-.- -|+..+++.|.+.|.+ +...-... ..+.|++++.+ ....-.++
T Consensus 2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAe---L~fTy~~e---~l~krv~~la~--------------~~~s~~v~ 61 (259)
T COG0623 2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAE---LAFTYQGE---RLEKRVEELAE--------------ELGSDLVL 61 (259)
T ss_pred CccCCceEEEEEecccccHHHHHHHHHHHcCCE---EEEEeccH---HHHHHHHHHHh--------------hccCCeEE
Confidence 378999999999754 5889999999999974 43333322 23455555422 11224578
Q ss_pred EccCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCC-------C-c---ccHHHHHHHHHHHHHHHHHHHHh
Q psy7538 104 SGDITQLKLGISEIDKKELID-------NVDIVYHVAATIR-------F-D---EPIKTAVILNTRGTRDMLELSKQ 162 (543)
Q Consensus 104 ~gDl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~-------~-~---~~~~~~~~~Nv~gt~~ll~~a~~ 162 (543)
++|+++.+ +++.+++ +.|.++|+-|... | + +.+..+.++...+-..+.+.|+.
T Consensus 62 ~cDV~~d~------~i~~~f~~i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~ 132 (259)
T COG0623 62 PCDVTNDE------SIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARP 132 (259)
T ss_pred ecCCCCHH------HHHHHHHHHHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHH
Confidence 99999875 5665554 5899999988654 1 1 22233455555555555555554
|
|
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.0016 Score=66.45 Aligned_cols=114 Identities=15% Similarity=0.160 Sum_probs=75.0
Q ss_pred EEEEEcCcchhHHHHHHHHHhhCCCcC-----EEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 32 SIFLSGGSGFLGKVLIEKILRLEPNVK-----KIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 32 ~VlITGatGFiG~~Lv~~Ll~~g~~v~-----~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
+|.|+||+|.+|+.++..|...+. +. .++++++.+... +.+....|
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~-~~~~~e~el~LiD~~~~~~----------------------------~a~g~~~D 51 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRM-LGKDQPIILHLLDIPPAMK----------------------------VLEGVVME 51 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccc-cCCCCccEEEEEecCCccc----------------------------ccceeEee
Confidence 589999999999999999987532 11 588888754321 12233344
Q ss_pred CCCCCCCC----C-HHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEec
Q psy7538 107 ITQLKLGI----S-EIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIST 174 (543)
Q Consensus 107 l~~~~lgl----s-~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 174 (543)
+.+....+ . ..+....++++|+|||+|+..+- .++..+.+..|+.-.+.+.+...+..+...++.+-|
T Consensus 52 l~d~~~~~~~~~~~~~~~~~~~~~aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvs 125 (324)
T TIGR01758 52 LMDCAFPLLDGVVPTHDPAVAFTDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVG 125 (324)
T ss_pred hhcccchhcCceeccCChHHHhCCCCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence 44433100 0 01234567899999999998654 345678899999999999999988622444444433
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00075 Score=58.53 Aligned_cols=40 Identities=20% Similarity=0.522 Sum_probs=33.2
Q ss_pred EEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC-CCCCH
Q psy7538 32 SIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK-KGKTP 72 (543)
Q Consensus 32 ~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~-~~~~~ 72 (543)
+|.|.||||++|+.|++.|.+. |++.-+.+..|+. .++..
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~h-p~~e~~~~~~~~~~~g~~~ 41 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEH-PDFELVALVSSSRSAGKPL 41 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHT-STEEEEEEEESTTTTTSBH
T ss_pred CEEEECCCCHHHHHHHHHHhcC-CCccEEEeeeeccccCCee
Confidence 6899999999999999999984 8887777777777 55543
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00041 Score=64.77 Aligned_cols=81 Identities=23% Similarity=0.305 Sum_probs=48.8
Q ss_pred cCCCEEEEEcC----------------cchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhh
Q psy7538 28 YENKSIFLSGG----------------SGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTL 91 (543)
Q Consensus 28 ~~~~~VlITGa----------------tGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~ 91 (543)
++||+||||+| ||-+|..|++.+.++|+ .|.++..+..-
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga---~V~li~g~~~~---------------------- 55 (185)
T PF04127_consen 1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGA---EVTLIHGPSSL---------------------- 55 (185)
T ss_dssp -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT----EEEEEE-TTS-----------------------
T ss_pred CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCC---EEEEEecCccc----------------------
Confidence 46899999975 68999999999999997 67777776321
Q ss_pred cCcCCCCceEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcc
Q psy7538 92 RGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDE 140 (543)
Q Consensus 92 ~~~~~~~~v~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~ 140 (543)
.....+..+..+-.+.- .+.+...+++.|++||+||...|..
T Consensus 56 ---~~p~~~~~i~v~sa~em----~~~~~~~~~~~Di~I~aAAVsDf~p 97 (185)
T PF04127_consen 56 ---PPPPGVKVIRVESAEEM----LEAVKELLPSADIIIMAAAVSDFRP 97 (185)
T ss_dssp ------TTEEEEE-SSHHHH----HHHHHHHGGGGSEEEE-SB--SEEE
T ss_pred ---cccccceEEEecchhhh----hhhhccccCcceeEEEecchhheee
Confidence 11246667765433321 0234445567899999999987743
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.003 Score=65.92 Aligned_cols=185 Identities=18% Similarity=0.196 Sum_probs=101.9
Q ss_pred hhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCC-CCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEE
Q psy7538 26 KTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKK-GKTPNQRVEELFESPVFDALKTLRGKSILQKIQVIS 104 (543)
Q Consensus 26 ~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~-~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~ 104 (543)
.+-..++|.|.||||++|+.|++.|++. |.+ +|..+.+... ++.. .+ .......
T Consensus 34 ~~~~~~kVaIvGATG~vG~eLlrlL~~h-P~~-el~~l~s~~saG~~i----~~-------------------~~~~l~~ 88 (381)
T PLN02968 34 KSEEKKRIFVLGASGYTGAEVRRLLANH-PDF-EITVMTADRKAGQSF----GS-------------------VFPHLIT 88 (381)
T ss_pred ccccccEEEEECCCChHHHHHHHHHHhC-CCC-eEEEEEChhhcCCCc----hh-------------------hCccccC
Confidence 3335569999999999999999988887 665 7888877532 2211 00 0011222
Q ss_pred ccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCcc
Q psy7538 105 GDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVL 184 (543)
Q Consensus 105 gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i 184 (543)
+|..+.. .+ +... ++++|+||-+.+.. .+.+++..+. . + .++|-.|+++-..+.. .
T Consensus 89 ~~~~~~~-~~---~~~~-~~~~DvVf~Alp~~---------------~s~~i~~~~~-~-g-~~VIDlSs~fRl~~~~-~ 144 (381)
T PLN02968 89 QDLPNLV-AV---KDAD-FSDVDAVFCCLPHG---------------TTQEIIKALP-K-D-LKIVDLSADFRLRDIA-E 144 (381)
T ss_pred cccccee-cC---CHHH-hcCCCEEEEcCCHH---------------HHHHHHHHHh-C-C-CEEEEcCchhccCCcc-c
Confidence 3432111 01 1222 37899999866431 2345555543 3 3 6899999997655432 2
Q ss_pred cccccCCCCC-hHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCC---cEEEEecCeeeecCCC
Q psy7538 185 EERTYLPPDD-PHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGM---PCMILRPSIVVPIYKE 260 (543)
Q Consensus 185 ~E~~y~~p~~-~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~l---p~~IlRps~V~G~~~~ 260 (543)
-|+-|..|.. |+-.-+.+..+.|-.-+.+....+-.-|+.|+.+=.++=.=+.+.. .+ ++++-=.+.+-|.++.
T Consensus 145 y~~~y~~p~~~pe~~~~~~yglpE~~r~~i~~~~iIAnPgC~~t~~~laL~PL~~~~--~i~~~~iiv~a~sgvSGAG~~ 222 (381)
T PLN02968 145 YEEWYGHPHRAPELQKEAVYGLTELQREEIKSARLVANPGCYPTGIQLPLVPLVKAG--LIEPDNIIIDAKSGVSGAGRG 222 (381)
T ss_pred chhccCCCCCCcccchhhhcccchhCHHHhcCCCEEECCCCHHHHHHHHHHHHHHcC--CCCCceEEEEEeeeccccCcc
Confidence 3445544432 2211112222332222333333344567999888776665555432 23 3666666777777765
Q ss_pred C
Q psy7538 261 P 261 (543)
Q Consensus 261 p 261 (543)
+
T Consensus 223 ~ 223 (381)
T PLN02968 223 A 223 (381)
T ss_pred c
Confidence 4
|
|
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0056 Score=54.60 Aligned_cols=117 Identities=15% Similarity=0.194 Sum_probs=77.4
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|.|+||+|.+|++++-.|...+ -..+|+++++.... ++....++-+.. .....+.....+|.
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~-l~~ei~L~D~~~~~--~~g~a~Dl~~~~----------~~~~~~~~i~~~~~--- 64 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQG-LADEIVLIDINEDK--AEGEALDLSHAS----------APLPSPVRITSGDY--- 64 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTT-TSSEEEEEESSHHH--HHHHHHHHHHHH----------HGSTEEEEEEESSG---
T ss_pred CEEEEECCCChHHHHHHHHHHhCC-CCCceEEeccCccc--ceeeehhhhhhh----------hhcccccccccccc---
Confidence 689999999999999999999884 45789999987531 111111221110 11112333333222
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEec
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIST 174 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 174 (543)
+.++++|+|+-+|+..+- .++..+.++.|..-.+++.+...+. +...++.+-|
T Consensus 65 ----------~~~~~aDivvitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~-~p~~~vivvt 118 (141)
T PF00056_consen 65 ----------EALKDADIVVITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKY-APDAIVIVVT 118 (141)
T ss_dssp ----------GGGTTESEEEETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHH-STTSEEEE-S
T ss_pred ----------cccccccEEEEeccccccccccHHHHHHHhHhHHHHHHHHHHHh-CCccEEEEeC
Confidence 235799999999997643 4566778899999999999999887 4555554444
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >KOG1202|consensus | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0016 Score=73.49 Aligned_cols=165 Identities=19% Similarity=0.293 Sum_probs=112.8
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
.|+.+|+||-|--|-.|+..|+.+|. ..+.+.+|+.-..-.+.+.-. .. ....-++.+-.-|++.
T Consensus 1768 eksYii~GGLGGFGLELaqWLi~RGa--r~lVLtSRsGirtGYQa~~vr-----------rW--r~~GVqV~vsT~nitt 1832 (2376)
T KOG1202|consen 1768 EKSYIIVGGLGGFGLELAQWLIQRGA--RKLVLTSRSGIRTGYQALMVR-----------RW--RRRGVQVQVSTSNITT 1832 (2376)
T ss_pred cceEEEeccccchhHHHHHHHHhcCc--eEEEEeccccchhhHHHHHHH-----------HH--HhcCeEEEEecccchh
Confidence 58999999999999999999999975 577788887644333333311 11 1111234444456655
Q ss_pred CCCCCCHHHHHHHhcC------ccEEEEcCccCCC----cc---cHHHHHHHHHHHHHHHHHHHHh-ccCCceEEEEecC
Q psy7538 110 LKLGISEIDKKELIDN------VDIVYHVAATIRF----DE---PIKTAVILNTRGTRDMLELSKQ-MKNLKCFTYISTA 175 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~------vd~ViH~AA~v~~----~~---~~~~~~~~Nv~gt~~ll~~a~~-~~~l~~~V~vST~ 175 (543)
.. .-+.++++ +-.|||+|+..+. ++ ..++..+.-+.||.+|=...++ |+-++-||..||.
T Consensus 1833 ~~------ga~~Li~~s~kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSv 1906 (2376)
T KOG1202|consen 1833 AE------GARGLIEESNKLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSV 1906 (2376)
T ss_pred hh------hHHHHHHHhhhcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEee
Confidence 43 56666653 6889999998753 22 3444555678899998877776 5678999999998
Q ss_pred cc-ccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCee
Q psy7538 176 YC-HPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIV 254 (543)
Q Consensus 176 y~-~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V 254 (543)
.+ .++... +.|+.+....|+++.+....|+|-+-+-=+.|
T Consensus 1907 scGRGN~GQ---------------------------------------tNYG~aNS~MERiceqRr~~GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1907 SCGRGNAGQ---------------------------------------TNYGLANSAMERICEQRRHEGFPGTAIQWGAI 1947 (2376)
T ss_pred cccCCCCcc---------------------------------------cccchhhHHHHHHHHHhhhcCCCcceeeeecc
Confidence 44 333221 68999999999999877666888666655443
|
|
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0027 Score=65.32 Aligned_cols=38 Identities=18% Similarity=0.354 Sum_probs=32.9
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
+++|+|.||||++|+.|++.|.++++.+.++..+.|..
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~ 38 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASAR 38 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccc
Confidence 47899999999999999999999876666888888764
|
|
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0014 Score=68.36 Aligned_cols=75 Identities=21% Similarity=0.317 Sum_probs=53.6
Q ss_pred cCCCEEEEEcC----------------cchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhh
Q psy7538 28 YENKSIFLSGG----------------SGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTL 91 (543)
Q Consensus 28 ~~~~~VlITGa----------------tGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~ 91 (543)
++|++|+|||| ||.+|..+++.|.+.|. +|+++.++.....
T Consensus 183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga---~V~~~~g~~~~~~-------------------- 239 (390)
T TIGR00521 183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGA---DVTLITGPVSLLT-------------------- 239 (390)
T ss_pred cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCC---EEEEeCCCCccCC--------------------
Confidence 78999999998 57899999999999997 7777776542210
Q ss_pred cCcCCCCceEEEEccCCCCCCCCCHHHH-HHHh----cCccEEEEcCccCCC
Q psy7538 92 RGKSILQKIQVISGDITQLKLGISEIDK-KELI----DNVDIVYHVAATIRF 138 (543)
Q Consensus 92 ~~~~~~~~v~~i~gDl~~~~lgls~~~~-~~l~----~~vd~ViH~AA~v~~ 138 (543)
+ ..+ ...|+++.+ ++ +.++ .++|++||+||...|
T Consensus 240 --~---~~~--~~~~v~~~~------~~~~~~~~~~~~~~D~~i~~Aavsd~ 278 (390)
T TIGR00521 240 --P---PGV--KSIKVSTAE------EMLEAALNELAKDFDIFISAAAVADF 278 (390)
T ss_pred --C---CCc--EEEEeccHH------HHHHHHHHhhcccCCEEEEccccccc
Confidence 1 122 345666543 44 4333 468999999998765
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0045 Score=62.30 Aligned_cols=86 Identities=17% Similarity=0.143 Sum_probs=56.6
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
.++++++|||| |-+|++++..|.+.|. ++|+++.|+... .+|.+++.+ .+... ...+.....|+
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La~~G~--~~V~I~~R~~~~---~~~a~~l~~-----~l~~~-----~~~~~~~~~d~ 187 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCALDGA--KEITIFNIKDDF---YERAEQTAE-----KIKQE-----VPECIVNVYDL 187 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCC--CEEEEEeCCchH---HHHHHHHHH-----HHhhc-----CCCceeEEech
Confidence 46899999998 8999999999999875 579999997521 123332211 11111 12334455677
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCcc
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAAT 135 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~ 135 (543)
++.+ ++...++.+|+|||+-..
T Consensus 188 ~~~~------~~~~~~~~~DilINaTp~ 209 (289)
T PRK12548 188 NDTE------KLKAEIASSDILVNATLV 209 (289)
T ss_pred hhhh------HHHhhhccCCEEEEeCCC
Confidence 6543 566777889999997543
|
|
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.012 Score=59.80 Aligned_cols=121 Identities=17% Similarity=0.141 Sum_probs=73.0
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|.|+||||.+|.+++..|+..|. ..+|.+++|..+....+....++ .+.+.. ......+. + +
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~-~~~v~lvd~~~~~~~l~~~~~dl-----~d~~~~-----~~~~~~i~-~--~-- 64 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDV-VKEINLISRPKSLEKLKGLRLDI-----YDALAA-----AGIDAEIK-I--S-- 64 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-CCEEEEEECcccccccccccchh-----hhchhc-----cCCCcEEE-E--C--
Confidence 6899999999999999999999864 34789999854211111100011 111110 00011111 1 1
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEec
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIST 174 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 174 (543)
. +.+. +.++|+||-+|+..+- .++..+..+.|+.-.+.+.+...+...-..+|.+|+
T Consensus 65 ~------d~~~-l~~aDiViitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~n 122 (309)
T cd05294 65 S------DLSD-VAGSDIVIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTN 122 (309)
T ss_pred C------CHHH-hCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 1 2333 7899999999997653 345567788999999999888776522124444443
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.1 Score=53.21 Aligned_cols=117 Identities=12% Similarity=0.164 Sum_probs=76.4
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
++++|.|+|+ |.+|..++-.|+..+ -+.+++++++...... ....++.+. .....++....+
T Consensus 5 ~~~ki~iiGa-G~vG~~~a~~l~~~~-~~~el~L~D~~~~~~~--g~~~Dl~~~-----------~~~~~~~~i~~~--- 66 (315)
T PRK00066 5 QHNKVVLVGD-GAVGSSYAYALVNQG-IADELVIIDINKEKAE--GDAMDLSHA-----------VPFTSPTKIYAG--- 66 (315)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcC-CCCEEEEEeCCCchhH--HHHHHHHhh-----------ccccCCeEEEeC---
Confidence 4689999998 999999999988874 3458999988653321 111122111 111123333322
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEec
Q psy7538 109 QLKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIST 174 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 174 (543)
+.+. ++++|+||-+|+..+- .++..+..+.|..-.+.+++..++. +...++.+=|
T Consensus 67 ---------~~~~-~~~adivIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~-~~~~~vivvs 122 (315)
T PRK00066 67 ---------DYSD-CKDADLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMAS-GFDGIFLVAS 122 (315)
T ss_pred ---------CHHH-hCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEcc
Confidence 2333 5899999999997653 4556678999999999998888876 4454444433
|
|
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.03 Score=57.08 Aligned_cols=120 Identities=16% Similarity=0.102 Sum_probs=75.8
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcC-----EEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEE
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVK-----KIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVIS 104 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~-----~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~ 104 (543)
..+|.|+||+|++|+.++-.|+..+. +. +++++++.+....+.....++.+... + ....+.+..
T Consensus 3 p~KV~IIGa~G~VG~~~a~~l~~~~~-~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~---------~-~~~~~~i~~ 71 (323)
T TIGR01759 3 PVRVAVTGAAGQIGYSLLFRIASGEL-FGKDQPVVLHLLDIPPAMKALEGVAMELEDCAF---------P-LLAGVVATT 71 (323)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCc-ccCCCccEEEEEecCCcccccchHHHHHhhccc---------c-ccCCcEEec
Confidence 35899999999999999999987742 34 78888885422111111112211100 0 111222111
Q ss_pred ccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCC-ceEEEEec
Q psy7538 105 GDITQLKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNL-KCFTYIST 174 (543)
Q Consensus 105 gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l-~~~V~vST 174 (543)
+ +. ..++++|+|+.+|+..+- .++..+.+..|+.-.+.+.+.+.+. .. ..++.+-|
T Consensus 72 ~------------~~-~~~~daDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~-~~~~~iiivvs 129 (323)
T TIGR01759 72 D------------PE-EAFKDVDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKV-AKKDVKVLVVG 129 (323)
T ss_pred C------------hH-HHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh-CCCCeEEEEeC
Confidence 1 22 445899999999997643 4566778999999999999999887 43 55555444
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.016 Score=51.24 Aligned_cols=79 Identities=24% Similarity=0.315 Sum_probs=54.8
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
=+++++++|.|| |-+|+.++..|.+.|. ++|++..|+. +|.+++.+. + ....+.++..
T Consensus 9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~--~~i~i~nRt~------~ra~~l~~~-----~-------~~~~~~~~~~- 66 (135)
T PF01488_consen 9 DLKGKRVLVIGA-GGAARAVAAALAALGA--KEITIVNRTP------ERAEALAEE-----F-------GGVNIEAIPL- 66 (135)
T ss_dssp TGTTSEEEEESS-SHHHHHHHHHHHHTTS--SEEEEEESSH------HHHHHHHHH-----H-------TGCSEEEEEG-
T ss_pred CcCCCEEEEECC-HHHHHHHHHHHHHcCC--CEEEEEECCH------HHHHHHHHH-----c-------CccccceeeH-
Confidence 367899999996 8899999999999865 6899999974 444443211 1 1123444433
Q ss_pred CCCCCCCCCHHHHHHHhcCccEEEEcCccCC
Q psy7538 107 ITQLKLGISEIDKKELIDNVDIVYHVAATIR 137 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~~vd~ViH~AA~v~ 137 (543)
. ++...+.++|+||++.+...
T Consensus 67 -~---------~~~~~~~~~DivI~aT~~~~ 87 (135)
T PF01488_consen 67 -E---------DLEEALQEADIVINATPSGM 87 (135)
T ss_dssp -G---------GHCHHHHTESEEEE-SSTTS
T ss_pred -H---------HHHHHHhhCCeEEEecCCCC
Confidence 2 45577889999999977654
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.023 Score=58.67 Aligned_cols=181 Identities=17% Similarity=0.190 Sum_probs=91.7
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEE-e-cCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEE-EccC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLL-M-RTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVI-SGDI 107 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l-~-R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i-~gDl 107 (543)
++|.|.||||++|+.+++.|.+. |.+ ++..+ . |+..++... +. .+++... ..++
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~h-P~~-el~~l~~s~~sagk~~~----~~-----------------~~~l~~~~~~~~ 57 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNH-PEV-EITYLVSSRESAGKPVS----EV-----------------HPHLRGLVDLNL 57 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcC-CCc-eEEEEeccchhcCCChH----Hh-----------------CccccccCCcee
Confidence 58999999999999999999876 666 55533 4 332332211 11 0111111 1112
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCccccc
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEER 187 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i~E~ 187 (543)
.+. +.+.+.+++|+||-|.... ...+++..+.+. + +++|=.|+++-..+.. .-|+
T Consensus 58 ~~~-------~~~~~~~~~DvVf~alP~~---------------~s~~~~~~~~~~-G-~~VIDlS~~fR~~~~~-~y~~ 112 (346)
T TIGR01850 58 EPI-------DEEEIAEDADVVFLALPHG---------------VSAELAPELLAA-G-VKVIDLSADFRLKDPE-VYEK 112 (346)
T ss_pred ecC-------CHHHhhcCCCEEEECCCch---------------HHHHHHHHHHhC-C-CEEEeCChhhhcCChh-hhHH
Confidence 211 2334446899999876532 224455566555 4 6788888886543211 1222
Q ss_pred ccCCCCChHHHHH-HHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCC---cEEEEecCeeeecCCCC
Q psy7538 188 TYLPPDDPHQVIL-RAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGM---PCMILRPSIVVPIYKEP 261 (543)
Q Consensus 188 ~y~~p~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~l---p~~IlRps~V~G~~~~p 261 (543)
.|..+....++++ ..--+.|=.-+.+....+-.-|+.|+.+=.++=.=+.+.. .+ .+++-=-+.+-|.++.+
T Consensus 113 ~y~~~~~~~~~~~~~~y~lPE~n~~~i~~~~iianPgC~~t~~~l~L~PL~~~~--~i~~~~i~v~~~sgvSGaG~~~ 188 (346)
T TIGR01850 113 WYGFEHAGPELLQEAVYGLPELHREEIKGARLIANPGCYPTATLLALAPLLKEG--LIDPTSIIVDAKSGVSGAGRKA 188 (346)
T ss_pred hcCCCCCChhhhcCceEECCccCHHHhCCCcEEEcCCcHHHHHHHHHHHHHHcC--CCCCCcEEEEEEEECcccCcCc
Confidence 2322221111111 0001111111122223234457899887776655554432 23 25565666777777654
|
This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons. |
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0046 Score=59.89 Aligned_cols=29 Identities=24% Similarity=0.465 Sum_probs=23.2
Q ss_pred EEE-cCcchhHHHHHHHHHhhCCCcCEEEEEec
Q psy7538 34 FLS-GGSGFLGKVLIEKILRLEPNVKKIYLLMR 65 (543)
Q Consensus 34 lIT-GatGFiG~~Lv~~Ll~~g~~v~~V~~l~R 65 (543)
+|| .+||.||.++++.|++.|+ +|+++.|
T Consensus 18 ~itN~SSGgIG~AIA~~la~~Ga---~Vvlv~~ 47 (227)
T TIGR02114 18 SITNHSTGHLGKIITETFLSAGH---EVTLVTT 47 (227)
T ss_pred eecCCcccHHHHHHHHHHHHCCC---EEEEEcC
Confidence 344 4489999999999999997 6666665
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.046 Score=56.44 Aligned_cols=181 Identities=15% Similarity=0.170 Sum_probs=91.9
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecC-CCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEE-EccC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRT-KKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVI-SGDI 107 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~-~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i-~gDl 107 (543)
.++|+|.||||++|+.+++.|.+. +++ ++..+.+. ..++. +.+. .+++..+ ..++
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~~-p~~-elv~v~~~~~~g~~----l~~~-----------------~~~~~~~~~~~~ 58 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLNH-PEV-EIVAVTSRSSAGKP----LSDV-----------------HPHLRGLVDLVL 58 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHcC-CCc-eEEEEECccccCcc----hHHh-----------------CcccccccCcee
Confidence 379999999999999999999876 566 55555553 22221 1111 0111111 1223
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCccccc
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEER 187 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i~E~ 187 (543)
.+.+ +. ..+++|+||-|.... . ..++...|.+. + +.+|=.|+++-..+.. ..++
T Consensus 59 ~~~~------~~--~~~~vD~Vf~alP~~---~------------~~~~v~~a~~a-G-~~VID~S~~fR~~~~~-~~~~ 112 (343)
T PRK00436 59 EPLD------PE--ILAGADVVFLALPHG---V------------SMDLAPQLLEA-G-VKVIDLSADFRLKDPE-VYEK 112 (343)
T ss_pred ecCC------HH--HhcCCCEEEECCCcH---H------------HHHHHHHHHhC-C-CEEEECCcccCCCCch-hhHH
Confidence 3322 22 446899999765431 1 13345555554 3 5788888886543211 1223
Q ss_pred ccCCCCChHHHHHH-HhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCC---cEEEEecCeeeecCCCC
Q psy7538 188 TYLPPDDPHQVILR-AESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGM---PCMILRPSIVVPIYKEP 261 (543)
Q Consensus 188 ~y~~p~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~l---p~~IlRps~V~G~~~~p 261 (543)
.|..|....++.+. .-.+.|-.-+.+....+-.-|+.|+..=.++=.=+.+.. .+ ++++-=.+.+-|.++.+
T Consensus 113 ~y~~~~~~~~~~~~~~~~lpe~~~~~i~~~~iIanPgC~~t~~~l~L~PL~~~~--~i~~~~i~v~~~~g~SGaG~~~ 188 (343)
T PRK00436 113 WYGFEHAAPELLKEAVYGLPELNREEIKGARLIANPGCYPTASLLALAPLLKAG--LIDPDSIIIDAKSGVSGAGRKA 188 (343)
T ss_pred hcCCCCCCchhhcCceeecCccCHHHhcCCCEEECCCCHHHHHHHHHHHHHHcC--CCCCCCEEEEEEEecccCCCCc
Confidence 33322211111111 001111111122222344467899888777666665543 23 36666666677776654
|
|
| >PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.01 Score=61.45 Aligned_cols=36 Identities=14% Similarity=0.349 Sum_probs=29.4
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
.++|+|+||||++|+.|++.|++. +++ +|..+.++.
T Consensus 3 ~~~V~I~GatG~iG~~l~~~L~~~-p~~-el~~~~~s~ 38 (349)
T PRK08664 3 KLKVGILGATGMVGQRFVQLLANH-PWF-EVTALAASE 38 (349)
T ss_pred CcEEEEECCCCHHHHHHHHHHHcC-CCc-eEEEEEcCh
Confidence 379999999999999999999875 565 777775553
|
|
| >PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.089 Score=53.98 Aligned_cols=161 Identities=16% Similarity=0.228 Sum_probs=88.8
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC-CCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK-KGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~-~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
++|.|+||||++|+.|++.|.++++.+.++..+.... .++. + . ... ...++.+
T Consensus 5 ~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~----l-----------------~--~~~---~~l~~~~ 58 (336)
T PRK05671 5 LDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHS----V-----------------P--FAG---KNLRVRE 58 (336)
T ss_pred CEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCe----e-----------------c--cCC---cceEEee
Confidence 6899999999999999999997666555776664432 2211 1 0 011 1233333
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCccccccc
Q psy7538 110 LKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTY 189 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i~E~~y 189 (543)
.+ ... ++++|+||-++.. + . ...+++.+.+. ++ ++|=.|+++-..+. .|
T Consensus 59 ~~-------~~~-~~~vD~vFla~p~----~---~--------s~~~v~~~~~~-G~-~VIDlS~~fR~~~~------pl 107 (336)
T PRK05671 59 VD-------SFD-FSQVQLAFFAAGA----A---V--------SRSFAEKARAA-GC-SVIDLSGALPSAQA------PN 107 (336)
T ss_pred CC-------hHH-hcCCCEEEEcCCH----H---H--------HHHHHHHHHHC-CC-eEEECchhhcCCCC------CE
Confidence 32 112 3789999987642 1 1 13366667665 54 57778887653211 11
Q ss_pred CCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCC-cEEEEecCeeeecCCCC
Q psy7538 190 LPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGM-PCMILRPSIVVPIYKEP 261 (543)
Q Consensus 190 ~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~l-p~~IlRps~V~G~~~~p 261 (543)
--|. +..+.+....+..+-.-||.|+.+=.++=.=+.... ++ .+++-=.+.|-|.++.+
T Consensus 108 ~lPE-----------vn~~~i~~~~~~~iIAnPgC~~t~~~laL~PL~~~~--~~~~v~v~t~~~vSGaG~~~ 167 (336)
T PRK05671 108 VVPE-----------VNAERLASLAAPFLVSSPSASAVALAVALAPLKGLL--DIQRVQVTACLAVSSLGREG 167 (336)
T ss_pred Eecc-----------cCHHHHccccCCCEEECCCcHHHHHHHHHHHHHHhc--CCCEEEEEEeecCcccCccc
Confidence 1111 122222322223344567899888776655555332 22 35555556666665543
|
|
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.023 Score=58.46 Aligned_cols=130 Identities=16% Similarity=0.223 Sum_probs=79.3
Q ss_pred cchhhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHH-----HHHh----c-CchhHHHHh
Q psy7538 21 PDRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRV-----EELF----E-SPVFDALKT 90 (543)
Q Consensus 21 ~~~i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl-----~~~~----~-~~~f~~l~~ 90 (543)
-.+-++-++.++|+|.|+ |.+|+.+++.|.+.|. .+|.++++..-..+...|- +++- + ....+++++
T Consensus 15 G~~~Q~~L~~~~VlVvG~-GglGs~va~~La~aGv--g~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~ 91 (339)
T PRK07688 15 GEEGQQKLREKHVLIIGA-GALGTANAEMLVRAGV--GKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEE 91 (339)
T ss_pred CHHHHHHhcCCcEEEECC-CHHHHHHHHHHHHcCC--CeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHH
Confidence 345567788999999996 9999999999999864 6888888754211111110 0000 0 011233433
Q ss_pred hcCcCCCCceEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEE
Q psy7538 91 LRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFT 170 (543)
Q Consensus 91 ~~~~~~~~~v~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V 170 (543)
-+ +. -++..+..+++. +....+++++|+|+-+... ... -..+-++|.+. + ..+|
T Consensus 92 in-p~--v~v~~~~~~~~~-------~~~~~~~~~~DlVid~~Dn------~~~--------r~~ln~~~~~~-~-iP~i 145 (339)
T PRK07688 92 IN-SD--VRVEAIVQDVTA-------EELEELVTGVDLIIDATDN------FET--------RFIVNDAAQKY-G-IPWI 145 (339)
T ss_pred HC-CC--cEEEEEeccCCH-------HHHHHHHcCCCEEEEcCCC------HHH--------HHHHHHHHHHh-C-CCEE
Confidence 33 32 246666666654 3577788999999987532 111 12356788887 4 5688
Q ss_pred EEecCcccc
Q psy7538 171 YISTAYCHP 179 (543)
Q Consensus 171 ~vST~y~~~ 179 (543)
+.|+....+
T Consensus 146 ~~~~~g~~G 154 (339)
T PRK07688 146 YGACVGSYG 154 (339)
T ss_pred EEeeeeeee
Confidence 888764433
|
|
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.06 Score=54.56 Aligned_cols=115 Identities=16% Similarity=0.102 Sum_probs=74.4
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|.|+|+||.+|+.++-.|...+ -+.++.++++. +.......|++. ....++....+ +.
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~-~~~elvLiDi~-~a~g~alDL~~~---------------~~~~~i~~~~~---~~ 60 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNP-LVSELALYDIV-NTPGVAADLSHI---------------NTPAKVTGYLG---PE 60 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC-CCcEEEEEecC-ccceeehHhHhC---------------CCcceEEEecC---CC
Confidence 589999999999999999887764 34578888876 211101111110 00011211101 11
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCC-CcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEe
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIR-FDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIS 173 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vS 173 (543)
++...++++|+|+-+||..+ ..+...+.++.|..-.+.+.+..++. +...++.+=
T Consensus 61 -------~~y~~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~-~p~a~vivv 116 (310)
T cd01337 61 -------ELKKALKGADVVVIPAGVPRKPGMTRDDLFNINAGIVRDLATAVAKA-CPKALILII 116 (310)
T ss_pred -------chHHhcCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEc
Confidence 34456789999999999865 34566778999999999999888887 555554443
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.026 Score=58.06 Aligned_cols=128 Identities=20% Similarity=0.245 Sum_probs=77.9
Q ss_pred cchhhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHH-----HHHh----c-CchhHHHHh
Q psy7538 21 PDRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRV-----EELF----E-SPVFDALKT 90 (543)
Q Consensus 21 ~~~i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl-----~~~~----~-~~~f~~l~~ 90 (543)
-.+-++-.++++|+|.|+ |-+|+++++.|.+.|. .+|.++++..-..+...|- +++- + ...-++|++
T Consensus 15 G~~~Q~~L~~~~VlIiG~-GglGs~va~~La~aGv--g~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~ 91 (338)
T PRK12475 15 GEEGQRKIREKHVLIVGA-GALGAANAEALVRAGI--GKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRK 91 (338)
T ss_pred CHHHHHhhcCCcEEEECC-CHHHHHHHHHHHHcCC--CEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHH
Confidence 355677889999999996 6699999999999965 5888888765221111110 0000 0 011233433
Q ss_pred hcCcCCCCceEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEE
Q psy7538 91 LRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFT 170 (543)
Q Consensus 91 ~~~~~~~~~v~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V 170 (543)
.+ +. -+++.+..|++. +.+..+++++|+||-+... .+.- ..+-++|.+. + ..+|
T Consensus 92 in-p~--v~i~~~~~~~~~-------~~~~~~~~~~DlVid~~D~------~~~r--------~~in~~~~~~-~-ip~i 145 (338)
T PRK12475 92 IN-SE--VEIVPVVTDVTV-------EELEELVKEVDLIIDATDN------FDTR--------LLINDLSQKY-N-IPWI 145 (338)
T ss_pred HC-CC--cEEEEEeccCCH-------HHHHHHhcCCCEEEEcCCC------HHHH--------HHHHHHHHHc-C-CCEE
Confidence 33 32 356777777653 3577888999999987532 1111 1244677776 4 4678
Q ss_pred EEecCcc
Q psy7538 171 YISTAYC 177 (543)
Q Consensus 171 ~vST~y~ 177 (543)
+.+....
T Consensus 146 ~~~~~g~ 152 (338)
T PRK12475 146 YGGCVGS 152 (338)
T ss_pred EEEeccc
Confidence 8776633
|
|
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.041 Score=59.06 Aligned_cols=88 Identities=19% Similarity=0.298 Sum_probs=56.7
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+|+|+++ +|..+++.|++.|+ +|.+..+.... ...++++ .|.. .++.++.+|.
T Consensus 3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~---~V~~~d~~~~~-~~~~~~~---------~l~~-------~~~~~~~~~~ 61 (450)
T PRK14106 3 LKGKKVLVVGAGV-SGLALAKFLKKLGA---KVILTDEKEED-QLKEALE---------ELGE-------LGIELVLGEY 61 (450)
T ss_pred cCCCEEEEECCCH-HHHHHHHHHHHCCC---EEEEEeCCchH-HHHHHHH---------HHHh-------cCCEEEeCCc
Confidence 4789999999888 99999999999997 67777775321 1111111 1211 1456777777
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHH
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVI 147 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~ 147 (543)
.+ ....++|+||++++.....+....+.+
T Consensus 62 ~~-----------~~~~~~d~vv~~~g~~~~~~~~~~a~~ 90 (450)
T PRK14106 62 PE-----------EFLEGVDLVVVSPGVPLDSPPVVQAHK 90 (450)
T ss_pred ch-----------hHhhcCCEEEECCCCCCCCHHHHHHHH
Confidence 64 234679999999886433333333333
|
|
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.063 Score=54.89 Aligned_cols=121 Identities=15% Similarity=0.083 Sum_probs=74.0
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcC-----EEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEE
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVK-----KIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVIS 104 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~-----~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~ 104 (543)
.++|.|+||+|.+|..++..|+..+- +. ++.++++.+....+.....++.+.. .....++.+..
T Consensus 4 ~~KV~IiGaaG~VG~~~a~~l~~~~~-~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~----------~~~~~~~~i~~ 72 (326)
T PRK05442 4 PVRVAVTGAAGQIGYSLLFRIASGDM-LGKDQPVILQLLEIPPALKALEGVVMELDDCA----------FPLLAGVVITD 72 (326)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhhhh-cCCCCccEEEEEecCCcccccceeehhhhhhh----------hhhcCCcEEec
Confidence 46899999999999999999887542 33 7888887542111111111111100 00011222211
Q ss_pred ccCCCCCCCCCHHHHHHHhcCccEEEEcCccCC-CcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEec
Q psy7538 105 GDITQLKLGISEIDKKELIDNVDIVYHVAATIR-FDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIST 174 (543)
Q Consensus 105 gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 174 (543)
+ +. +.++++|+|+-+|+..+ ..++..+.++.|+.-.+++.+...+......++.+-|
T Consensus 73 ~------------~y-~~~~daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs 130 (326)
T PRK05442 73 D------------PN-VAFKDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVG 130 (326)
T ss_pred C------------hH-HHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 1 22 44589999999999754 3456778899999999999998888423344444444
|
|
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.031 Score=65.04 Aligned_cols=79 Identities=10% Similarity=0.228 Sum_probs=55.2
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcC------------EEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVK------------KIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSI 96 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~------------~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~ 96 (543)
+.|+|+|.|| |++|+..++.|.+. +++. .|.+.++.. ++.+++ ...
T Consensus 568 ~~~rIlVLGA-G~VG~~~a~~La~~-~~~~~~~~~~~~~~~~lV~VaD~~~------~~a~~l--------------a~~ 625 (1042)
T PLN02819 568 KSQNVLILGA-GRVCRPAAEYLASV-KTISYYGDDSEEPTDVHVIVASLYL------KDAKET--------------VEG 625 (1042)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHhC-cCccccccccccccccEEEEECCCH------HHHHHH--------------HHh
Confidence 4679999996 99999999999886 4542 355555543 122221 111
Q ss_pred CCceEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCcc
Q psy7538 97 LQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAAT 135 (543)
Q Consensus 97 ~~~v~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~ 135 (543)
.+++..+..|+++.+ ++..+++++|+|+.|...
T Consensus 626 ~~~~~~v~lDv~D~e------~L~~~v~~~DaVIsalP~ 658 (1042)
T PLN02819 626 IENAEAVQLDVSDSE------SLLKYVSQVDVVISLLPA 658 (1042)
T ss_pred cCCCceEEeecCCHH------HHHHhhcCCCEEEECCCc
Confidence 135678889988765 788888899999998765
|
|
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.077 Score=50.20 Aligned_cols=127 Identities=10% Similarity=0.185 Sum_probs=77.6
Q ss_pred chhhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHH-------HHHh---cCchhHHHHhh
Q psy7538 22 DRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRV-------EELF---ESPVFDALKTL 91 (543)
Q Consensus 22 ~~i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl-------~~~~---~~~~f~~l~~~ 91 (543)
.+.++-.++.+|+|.|+.| +|..+++.|.+.|. ++|++++...-..+-..|- .++= -...-++|++.
T Consensus 11 ~~~q~~L~~s~VlviG~gg-lGsevak~L~~~GV--g~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~l 87 (198)
T cd01485 11 DEAQNKLRSAKVLIIGAGA-LGAEIAKNLVLAGI--DSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQEL 87 (198)
T ss_pred HHHHHHHhhCcEEEECCCH-HHHHHHHHHHHcCC--CEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHH
Confidence 4556677889999999877 99999999999864 6888887664321111110 0000 01123445554
Q ss_pred cCcCCCCceEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEE
Q psy7538 92 RGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTY 171 (543)
Q Consensus 92 ~~~~~~~~v~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~ 171 (543)
+ |.. +++.+..++.+. .++....+++.|+||-+-. +.... ..+-++|++. + ..+|+
T Consensus 88 N-p~v--~i~~~~~~~~~~-----~~~~~~~~~~~dvVi~~~d------~~~~~--------~~ln~~c~~~-~-ip~i~ 143 (198)
T cd01485 88 N-PNV--KLSIVEEDSLSN-----DSNIEEYLQKFTLVIATEE------NYERT--------AKVNDVCRKH-H-IPFIS 143 (198)
T ss_pred C-CCC--EEEEEecccccc-----hhhHHHHHhCCCEEEECCC------CHHHH--------HHHHHHHHHc-C-CCEEE
Confidence 4 442 566666666531 1246677889999996532 12222 2355788887 4 47888
Q ss_pred EecC
Q psy7538 172 ISTA 175 (543)
Q Consensus 172 vST~ 175 (543)
.++.
T Consensus 144 ~~~~ 147 (198)
T cd01485 144 CATY 147 (198)
T ss_pred EEee
Confidence 8876
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >cd05295 MDH_like Malate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.11 Score=55.00 Aligned_cols=122 Identities=12% Similarity=0.034 Sum_probs=74.2
Q ss_pred CCEEEEEcCcchhHHHHHHHHHh---hCCCc-CEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILR---LEPNV-KKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~---~g~~v-~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
.-+|.||||+|.||-+|+-.|.+ -|++- -.+.+++.+.....++.-.-++.++. | +. ...+.+..+
T Consensus 123 p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a-~--------pl-l~~v~i~~~ 192 (452)
T cd05295 123 PLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLA-F--------PL-LRGISVTTD 192 (452)
T ss_pred ceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhH-H--------hh-cCCcEEEEC
Confidence 45799999999999999988876 13321 14666666432222222222222211 0 11 123333321
Q ss_pred cCCCCCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccC-CceEEEEec
Q psy7538 106 DITQLKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKN-LKCFTYIST 174 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~-l~~~V~vST 174 (543)
-...++++|+||-+||..+- .+...+.++.|+.-.+.+.+...+... -.+++.+.|
T Consensus 193 -------------~~ea~~daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~t 250 (452)
T cd05295 193 -------------LDVAFKDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGR 250 (452)
T ss_pred -------------CHHHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 12556899999999997653 356677899999999999998888632 134444444
|
These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.011 Score=62.85 Aligned_cols=101 Identities=17% Similarity=0.229 Sum_probs=61.0
Q ss_pred CCCCCCCccccchhhccCcchh-hhhcCCCEEEEEcC----------------cchhHHHHHHHHHhhCCCcCEEEEEec
Q psy7538 3 NIGGAPDLVTIPKELQALPDRI-AKTYENKSIFLSGG----------------SGFLGKVLIEKILRLEPNVKKIYLLMR 65 (543)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~VlITGa----------------tGFiG~~Lv~~Ll~~g~~v~~V~~l~R 65 (543)
|.|+.|+--.+-..+...-.+- ..-++||+|+||+| ||-+|.+|++.+.+.|. +|+++.-
T Consensus 228 G~Grm~e~~~I~~~v~~~~~~~~~~~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA---~VtlI~G 304 (475)
T PRK13982 228 GVGRMAEPLEIAAAAEALLRPPQPKPLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGA---EVTLISG 304 (475)
T ss_pred CCCCCCCHHHHHHHHHHHHhhccccccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCC---cEEEEeC
Confidence 5677777544444443221110 01279999999975 68899999999999997 5555553
Q ss_pred CCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCCCCCCCHHHHHHHhc---CccEEEEcCccCCCc
Q psy7538 66 TKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQLKLGISEIDKKELID---NVDIVYHVAATIRFD 139 (543)
Q Consensus 66 ~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~~lgls~~~~~~l~~---~vd~ViH~AA~v~~~ 139 (543)
+..- .....+..+..+-.+ ++...+. ..|++||+||...|.
T Consensus 305 p~~~-------------------------~~p~~v~~i~V~ta~--------eM~~av~~~~~~Di~I~aAAVaDyr 348 (475)
T PRK13982 305 PVDL-------------------------ADPQGVKVIHVESAR--------QMLAAVEAALPADIAIFAAAVADWR 348 (475)
T ss_pred CcCC-------------------------CCCCCceEEEecCHH--------HHHHHHHhhCCCCEEEEecccccee
Confidence 3210 111345555443222 3333332 379999999987664
|
|
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.038 Score=55.16 Aligned_cols=77 Identities=16% Similarity=0.285 Sum_probs=49.9
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
..++|-|||||.|+.++|+|.++|.+ -.+-.|+. +|+..+ +..-|+ ..... ++..
T Consensus 7 ~d~iiYGAtGy~G~lvae~l~~~g~~---~aLAgRs~------~kl~~l---------~~~LG~----~~~~~--p~~~- 61 (382)
T COG3268 7 YDIIIYGATGYAGGLVAEYLAREGLT---AALAGRSS------AKLDAL---------RASLGP----EAAVF--PLGV- 61 (382)
T ss_pred eeEEEEccccchhHHHHHHHHHcCCc---hhhccCCH------HHHHHH---------HHhcCc----ccccc--CCCC-
Confidence 46899999999999999999999863 34445553 333221 111101 11111 2222
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCC
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIR 137 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~ 137 (543)
+..++.+++.+++|+||++.-.
T Consensus 62 -----p~~~~~~~~~~~VVlncvGPyt 83 (382)
T COG3268 62 -----PAALEAMASRTQVVLNCVGPYT 83 (382)
T ss_pred -----HHHHHHHHhcceEEEecccccc
Confidence 3478899999999999999753
|
|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.087 Score=50.02 Aligned_cols=126 Identities=15% Similarity=0.159 Sum_probs=76.2
Q ss_pred cchhhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHH-----HHHhc---CchhHHHHhhc
Q psy7538 21 PDRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRV-----EELFE---SPVFDALKTLR 92 (543)
Q Consensus 21 ~~~i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl-----~~~~~---~~~f~~l~~~~ 92 (543)
-.+-++-+++++|+|.| .|-+|+.+++.|.+.|. +++.++++..-..+...|- +++=. ..+.+++++-+
T Consensus 12 g~~~q~kl~~~~VlviG-~GglGs~ia~~La~~Gv--~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~n 88 (202)
T TIGR02356 12 GEEGQQRLLNSHVLIIG-AGGLGSPAALYLAGAGV--GTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELN 88 (202)
T ss_pred CHHHHHHhcCCCEEEEC-CCHHHHHHHHHHHHcCC--CeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhC
Confidence 34567788999999999 58899999999999864 6888888764222111111 00000 11223343333
Q ss_pred CcCCCCceEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEE
Q psy7538 93 GKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYI 172 (543)
Q Consensus 93 ~~~~~~~v~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~v 172 (543)
|. -+++.+..++.. +++..+++++|+||-+... .+.. ..+-+.|++. + ..+|+.
T Consensus 89 -p~--v~i~~~~~~i~~-------~~~~~~~~~~D~Vi~~~d~------~~~r--------~~l~~~~~~~-~-ip~i~~ 142 (202)
T TIGR02356 89 -SD--IQVTALKERVTA-------ENLELLINNVDLVLDCTDN------FATR--------YLINDACVAL-G-TPLISA 142 (202)
T ss_pred -CC--CEEEEehhcCCH-------HHHHHHHhCCCEEEECCCC------HHHH--------HHHHHHHHHc-C-CCEEEE
Confidence 32 244455444432 3577788999999987643 1111 2355778876 4 468887
Q ss_pred ecC
Q psy7538 173 STA 175 (543)
Q Consensus 173 ST~ 175 (543)
++.
T Consensus 143 ~~~ 145 (202)
T TIGR02356 143 AVV 145 (202)
T ss_pred Eec
Confidence 765
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.028 Score=48.89 Aligned_cols=36 Identities=25% Similarity=0.396 Sum_probs=28.7
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
++|.|.|++|-+|+.+++.+++. +++.-+-++.|+.
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~-~~~~lv~~v~~~~ 36 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILES-PGFELVGAVDRKP 36 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHS-TTEEEEEEEETTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhc-CCcEEEEEEecCC
Confidence 58999999999999999999996 5664455555655
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >COG4982 3-oxoacyl-[acyl-carrier protein] | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.46 Score=51.29 Aligned_cols=173 Identities=12% Similarity=0.141 Sum_probs=100.3
Q ss_pred hhcCCCEEEEEcCc-chhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEE
Q psy7538 26 KTYENKSIFLSGGS-GFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVIS 104 (543)
Q Consensus 26 ~~~~~~~VlITGat-GFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~ 104 (543)
.-|.++..+||||+ |-||..++++||.-|. +|++..-.- + ++|++ .+..|-..+ ......+-++.
T Consensus 392 ~~y~d~valVTGA~~gSIaa~Vv~~LL~gGA---tVI~TTS~~-s---~~r~e------fyr~LYa~~-a~~ga~LwvVp 457 (866)
T COG4982 392 GTYGDKVALVTGASKGSIAAAVVARLLAGGA---TVIATTSRL-S---EERTE------FYRSLYARH-ARYGAALWVVP 457 (866)
T ss_pred CCcccceEEEecCCCcchHHHHHHHHHhCCc---EEEEEcccc-c---HHHHH------HHHHHHHhh-CCCCceEEEEe
Confidence 35889999999985 8999999999999986 554443221 1 34442 334444444 44456677787
Q ss_pred ccCCCCCCCCCHHHHHHHhc---------------------CccEEEEcCccCCC------cccHHHHHHHHHHHHHHHH
Q psy7538 105 GDITQLKLGISEIDKKELID---------------------NVDIVYHVAATIRF------DEPIKTAVILNTRGTRDML 157 (543)
Q Consensus 105 gDl~~~~lgls~~~~~~l~~---------------------~vd~ViH~AA~v~~------~~~~~~~~~~Nv~gt~~ll 157 (543)
.++.... |++.+++ ..+.+|-.||..-. +..-+...++=+...++++
T Consensus 458 aN~~Sys------DVdAlIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rli 531 (866)
T COG4982 458 ANMGSYS------DVDALIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLI 531 (866)
T ss_pred ccccchh------hHHHHHHHhccccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHH
Confidence 7777654 6776653 14777888875321 1112234555555556666
Q ss_pred HHHHhcc---CCc---eEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHH
Q psy7538 158 ELSKQMK---NLK---CFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCL 231 (543)
Q Consensus 158 ~~a~~~~---~l~---~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~ 231 (543)
-..++.+ ++. ++|.-.|- ++.-. +-...|+.+|..
T Consensus 532 ggl~~~~s~r~v~~R~hVVLPgSP----NrG~F-----------------------------------GgDGaYgEsK~a 572 (866)
T COG4982 532 GGLKKQGSSRGVDTRLHVVLPGSP----NRGMF-----------------------------------GGDGAYGESKLA 572 (866)
T ss_pred HHhhhhccccCcccceEEEecCCC----CCCcc-----------------------------------CCCcchhhHHHH
Confidence 5555442 121 12222221 11000 011689999999
Q ss_pred HHHHHHHHhh-c----CCcEEEEecCeeeec
Q psy7538 232 AEGLVAECME-L----GMPCMILRPSIVVPI 257 (543)
Q Consensus 232 aE~~v~~~~~-~----~lp~~IlRps~V~G~ 257 (543)
-|.++.+++. . .+.++--+.+.+-|+
T Consensus 573 ldav~~RW~sEs~Wa~~vsl~~A~IGWtrGT 603 (866)
T COG4982 573 LDAVVNRWHSESSWAARVSLAHALIGWTRGT 603 (866)
T ss_pred HHHHHHHhhccchhhHHHHHhhhheeeeccc
Confidence 9999988765 2 344555555555554
|
|
| >PRK00048 dihydrodipicolinate reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.1 Score=51.49 Aligned_cols=35 Identities=23% Similarity=0.384 Sum_probs=25.9
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRT 66 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~ 66 (543)
++|.|+|++|.+|+.+++.+.+. +++.-+.+..+.
T Consensus 2 mkV~IiG~~G~mG~~i~~~l~~~-~~~elvav~d~~ 36 (257)
T PRK00048 2 IKVAVAGASGRMGRELIEAVEAA-EDLELVAAVDRP 36 (257)
T ss_pred cEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecC
Confidence 68999999999999999887765 565333334444
|
|
| >TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.19 Score=51.05 Aligned_cols=115 Identities=14% Similarity=0.081 Sum_probs=73.2
Q ss_pred EEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCCC
Q psy7538 32 SIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQLK 111 (543)
Q Consensus 32 ~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~~ 111 (543)
+|.|+||+|.+|++++-.|+..+ -+.++.++++.+ .......|++ ......+.... .+.
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~-~~~elvL~Di~~-a~g~a~DL~~-----------------~~~~~~i~~~~-~~~- 59 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQP-YVSELSLYDIAG-AAGVAADLSH-----------------IPTAASVKGFS-GEE- 59 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCC-CCcEEEEecCCC-CcEEEchhhc-----------------CCcCceEEEec-CCC-
Confidence 58999999999999999888774 345788888765 1100001111 11111111100 011
Q ss_pred CCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEec
Q psy7538 112 LGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIST 174 (543)
Q Consensus 112 lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 174 (543)
++...++++|+|+-+|+..+- .+...+.+..|+.-.+.+.+...+. +...++.+=|
T Consensus 60 ------~~~~~~~daDivvitaG~~~~~g~~R~dll~~N~~I~~~i~~~i~~~-~p~~iiivvs 116 (312)
T TIGR01772 60 ------GLENALKGADVVVIPAGVPRKPGMTRDDLFNVNAGIVKDLVAAVAES-CPKAMILVIT 116 (312)
T ss_pred ------chHHHcCCCCEEEEeCCCCCCCCccHHHHHHHhHHHHHHHHHHHHHh-CCCeEEEEec
Confidence 244567899999999997643 3556678999999999999888877 5555544433
|
Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases. |
| >TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.029 Score=57.71 Aligned_cols=36 Identities=17% Similarity=0.388 Sum_probs=30.2
Q ss_pred EEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 32 SIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 32 ~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
+|+|.||||++|+.|++.|.++++.+.++..+.+..
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~ 36 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDR 36 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccc
Confidence 589999999999999999988877666777776654
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978. |
| >COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.21 Score=50.54 Aligned_cols=186 Identities=17% Similarity=0.184 Sum_probs=94.5
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEe-cCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLM-RTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~-R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
.++|+|.||||+.|..|++.|... |++. +.... |..+++...+ . . |+.... + |+.
T Consensus 2 ~~kV~IvGasGYtG~EL~rlL~~H-p~ve-~~~~ss~~~~g~~~~~----~------------~-p~l~g~---~--~l~ 57 (349)
T COG0002 2 MIKVGIVGASGYTGLELLRLLAGH-PDVE-LILISSRERAGKPVSD----V------------H-PNLRGL---V--DLP 57 (349)
T ss_pred CceEEEEcCCCCcHHHHHHHHhcC-CCeE-EEEeechhhcCCchHH----h------------C-cccccc---c--ccc
Confidence 468999999999999999988887 8886 44444 4334443211 1 1 211110 0 111
Q ss_pred CCCCCCCHHHHHH-HhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCccccc
Q psy7538 109 QLKLGISEIDKKE-LIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEER 187 (543)
Q Consensus 109 ~~~lgls~~~~~~-l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i~E~ 187 (543)
.. ..+.+. ..+++|+||-+-... . ...++....+. +++ +|=.|++|=..+.. +-|+
T Consensus 58 ~~-----~~~~~~~~~~~~DvvFlalPhg---~------------s~~~v~~l~~~-g~~-VIDLSadfR~~d~~-~ye~ 114 (349)
T COG0002 58 FQ-----TIDPEKIELDECDVVFLALPHG---V------------SAELVPELLEA-GCK-VIDLSADFRLKDPE-VYEK 114 (349)
T ss_pred cc-----cCChhhhhcccCCEEEEecCch---h------------HHHHHHHHHhC-CCe-EEECCcccccCCHH-HHHH
Confidence 11 112233 345799999765421 1 12233333332 443 88999986654322 3344
Q ss_pred ccCCCCChHHH-HHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh--cCCcEEEEecCeeeecCCCCC
Q psy7538 188 TYLPPDDPHQV-ILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME--LGMPCMILRPSIVVPIYKEPL 262 (543)
Q Consensus 188 ~y~~p~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~--~~lp~~IlRps~V~G~~~~p~ 262 (543)
.|..+....++ -+.+-.+.|=.-+++...-+-.-|..|.-.=.+|=.=+.+..- ...+++|---|.+-|.++.|.
T Consensus 115 ~Yg~~h~~~~~l~~avYGLpEl~~e~i~~A~lIAnPGCypTa~iLal~PL~~~~ll~~~~~~ivdakSG~SGaGrk~s 192 (349)
T COG0002 115 WYGFTHAGPELLEDAVYGLPELHREKIRGAKLIANPGCYPTAAILALAPLVKAGLLDPDSPPIVDAKSGVSGAGRKAS 192 (349)
T ss_pred hhCCCCCCchhhhcccccCcccCHHHHhcCCEeeCCCchHHHHHHHHHHHHHcCCcCCCCceEEEEeEecCcCCCCcc
Confidence 55444322211 1111112221223333333334556776555555444444321 134567777788888887763
|
|
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.19 Score=50.10 Aligned_cols=127 Identities=13% Similarity=0.123 Sum_probs=76.4
Q ss_pred chhhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHH-----HHHhc---CchhHHHHhhcC
Q psy7538 22 DRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRV-----EELFE---SPVFDALKTLRG 93 (543)
Q Consensus 22 ~~i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl-----~~~~~---~~~f~~l~~~~~ 93 (543)
.+-++-+++.+|+|.|+ |-+|+.+++.|.+.|. .++.+++...-..+...|- +++=+ ...-+++++-+
T Consensus 19 ~e~Q~kL~~s~VlIvG~-GGLGs~va~~LA~aGV--G~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iN- 94 (287)
T PRK08223 19 PTEQQRLRNSRVAIAGL-GGVGGIHLLTLARLGI--GKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDIN- 94 (287)
T ss_pred HHHHHHHhcCCEEEECC-CHHHHHHHHHHHHhCC--CeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHC-
Confidence 44567788999999995 7799999999999964 6888877654222111110 01100 11233444444
Q ss_pred cCCCCceEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEe
Q psy7538 94 KSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIS 173 (543)
Q Consensus 94 ~~~~~~v~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vS 173 (543)
|. -+++.+...++.. ....+++++|+|+.+.-...+ . .-..+-++|++. + ..+|+.|
T Consensus 95 P~--v~V~~~~~~l~~~-------n~~~ll~~~DlVvD~~D~~~~----~--------~r~~ln~~c~~~-~-iP~V~~~ 151 (287)
T PRK08223 95 PE--LEIRAFPEGIGKE-------NADAFLDGVDVYVDGLDFFEF----D--------ARRLVFAACQQR-G-IPALTAA 151 (287)
T ss_pred CC--CEEEEEecccCcc-------CHHHHHhCCCEEEECCCCCcH----H--------HHHHHHHHHHHc-C-CCEEEEe
Confidence 33 3566666666654 477888999999965422111 1 113355788887 4 5677766
Q ss_pred cC
Q psy7538 174 TA 175 (543)
Q Consensus 174 T~ 175 (543)
..
T Consensus 152 ~~ 153 (287)
T PRK08223 152 PL 153 (287)
T ss_pred cc
Confidence 54
|
|
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.15 Score=48.87 Aligned_cols=130 Identities=14% Similarity=0.113 Sum_probs=76.1
Q ss_pred chhhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHH----HHHhc---CchhHHHHhhcCc
Q psy7538 22 DRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRV----EELFE---SPVFDALKTLRGK 94 (543)
Q Consensus 22 ~~i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl----~~~~~---~~~f~~l~~~~~~ 94 (543)
...++-+++.+|+|.|+ |-+|+.+++.|.+.|. .++.+.+...-..+...|- +++=. ...-+++++.+ +
T Consensus 20 ~~~q~~L~~~~V~ViG~-GglGs~ia~~La~~Gv--g~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~ln-p 95 (212)
T PRK08644 20 PKLLEKLKKAKVGIAGA-GGLGSNIAVALARSGV--GNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEIN-P 95 (212)
T ss_pred HHHHHHHhCCCEEEECc-CHHHHHHHHHHHHcCC--CeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHC-C
Confidence 45677889999999995 8899999999999864 6788888763221111111 00000 01122333333 2
Q ss_pred CCCCceEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEec
Q psy7538 95 SILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIST 174 (543)
Q Consensus 95 ~~~~~v~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 174 (543)
. -+++.+...+++ ++...+++++|+||.|.-. .. ....+.+.|.+..+ ..+|+.|.
T Consensus 96 ~--v~v~~~~~~i~~-------~~~~~~~~~~DvVI~a~D~------~~--------~r~~l~~~~~~~~~-~p~I~~~~ 151 (212)
T PRK08644 96 F--VEIEAHNEKIDE-------DNIEELFKDCDIVVEAFDN------AE--------TKAMLVETVLEHPG-KKLVAASG 151 (212)
T ss_pred C--CEEEEEeeecCH-------HHHHHHHcCCCEEEECCCC------HH--------HHHHHHHHHHHhCC-CCEEEeeh
Confidence 2 355566555544 3567788999999988421 11 11335567776512 57788765
Q ss_pred Ccccc
Q psy7538 175 AYCHP 179 (543)
Q Consensus 175 ~y~~~ 179 (543)
...++
T Consensus 152 ~~~~~ 156 (212)
T PRK08644 152 MAGYG 156 (212)
T ss_pred hhccC
Confidence 54443
|
|
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.3 Score=47.88 Aligned_cols=125 Identities=14% Similarity=0.108 Sum_probs=77.0
Q ss_pred chhhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHH-----HHHhc---CchhHHHHhhcC
Q psy7538 22 DRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRV-----EELFE---SPVFDALKTLRG 93 (543)
Q Consensus 22 ~~i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl-----~~~~~---~~~f~~l~~~~~ 93 (543)
.+-++-+++++|+|.|+ |-+|+.+++.|.+.| |.++.+++...-..+...|- +++=. ..+-++|++.+
T Consensus 24 ~~~Q~~L~~~~VliiG~-GglGs~va~~La~~G--vg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~ln- 99 (245)
T PRK05690 24 FDGQEKLKAARVLVVGL-GGLGCAASQYLAAAG--VGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARIN- 99 (245)
T ss_pred HHHHHHhcCCeEEEECC-CHHHHHHHHHHHHcC--CCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHC-
Confidence 34567788999999997 889999999999986 46888887664333222221 01100 11233444444
Q ss_pred cCCCCceEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEe
Q psy7538 94 KSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIS 173 (543)
Q Consensus 94 ~~~~~~v~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vS 173 (543)
|. -+++.+...++ +++...+++++|+||.|.... +. -..+-++|++. + ..+|+.+
T Consensus 100 p~--v~i~~~~~~i~-------~~~~~~~~~~~DiVi~~~D~~------~~--------r~~ln~~~~~~-~-ip~v~~~ 154 (245)
T PRK05690 100 PH--IAIETINARLD-------DDELAALIAGHDLVLDCTDNV------AT--------RNQLNRACFAA-K-KPLVSGA 154 (245)
T ss_pred CC--CEEEEEeccCC-------HHHHHHHHhcCCEEEecCCCH------HH--------HHHHHHHHHHh-C-CEEEEee
Confidence 33 25566655544 335777889999999886421 11 12355778876 4 4677765
Q ss_pred cC
Q psy7538 174 TA 175 (543)
Q Consensus 174 T~ 175 (543)
+.
T Consensus 155 ~~ 156 (245)
T PRK05690 155 AI 156 (245)
T ss_pred ec
Confidence 54
|
|
| >COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.22 Score=50.19 Aligned_cols=118 Identities=17% Similarity=0.174 Sum_probs=76.0
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
++|.|+|| |.+|+.++-.|+..+.. .+++++++.++.... ..+ ++.+.. +.....+ .+.+| .
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~-~el~LiDi~~~~~~G-~a~-DL~~~~----------~~~~~~~-~i~~~-~-- 62 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLG-SELVLIDINEEKAEG-VAL-DLSHAA----------APLGSDV-KITGD-G-- 62 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhccccc-ceEEEEEcccccccc-hhc-chhhcc----------hhccCce-EEecC-C--
Confidence 58999999 99999999999777542 288888888432211 111 111110 0111122 22222 1
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecC
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTA 175 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~ 175 (543)
+. ..++++|+|+-+||..+- .+.-.+.++.|..-.+.+.+...+. +...++.+=|-
T Consensus 63 -------~y-~~~~~aDiVvitAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~-~~d~ivlVvtN 119 (313)
T COG0039 63 -------DY-EDLKGADIVVITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKY-APDAIVLVVTN 119 (313)
T ss_pred -------Ch-hhhcCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh-CCCeEEEEecC
Confidence 11 345799999999987764 3466788999999999999888887 55666666653
|
|
| >PLN00112 malate dehydrogenase (NADP); Provisional | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.3 Score=51.87 Aligned_cols=124 Identities=13% Similarity=0.075 Sum_probs=78.0
Q ss_pred hhhhcCCCEEEEEcCcchhHHHHHHHHHhh-------CCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCC
Q psy7538 24 IAKTYENKSIFLSGGSGFLGKVLIEKILRL-------EPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSI 96 (543)
Q Consensus 24 i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~-------g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~ 96 (543)
...+-+--+|.|+|++|.+|.+++-.|+.. +. +.++.++.+.++.... -..++.+.. | + .
T Consensus 94 ~~~~~~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i-~~eLvliD~~~~~a~G--~amDL~daa-~--------~-~ 160 (444)
T PLN00112 94 TKSWKKLINVAVSGAAGMISNHLLFKLASGEVFGPDQPI-ALKLLGSERSKQALEG--VAMELEDSL-Y--------P-L 160 (444)
T ss_pred hhcCCCCeEEEEECCCcHHHHHHHHHHHhcccccCCCCc-ccEEEEEcCCcchhHH--HHHHHHHhh-h--------h-h
Confidence 334445568999999999999999999876 32 2368877776543221 111221110 0 1 1
Q ss_pred CCceEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHh-ccCCceEEEEec
Q psy7538 97 LQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQ-MKNLKCFTYIST 174 (543)
Q Consensus 97 ~~~v~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~-~~~l~~~V~vST 174 (543)
..++.+..+| . ..++++|+||-+||..+- .+...+.++.|+.-.+.+.+...+ . +...+|.+-|
T Consensus 161 ~~~v~i~~~~------------y-e~~kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a-~p~~ivIVVs 226 (444)
T PLN00112 161 LREVSIGIDP------------Y-EVFQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVA-SRNVKVIVVG 226 (444)
T ss_pred cCceEEecCC------------H-HHhCcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEEcC
Confidence 1233222222 2 345799999999998653 356677899999999999999988 4 3344444433
|
|
| >PLN02383 aspartate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.058 Score=55.53 Aligned_cols=38 Identities=13% Similarity=0.258 Sum_probs=30.4
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRT 66 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~ 66 (543)
+.++|+|.||||++|..|++.|.+++|.+.++..+...
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~ 43 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASA 43 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEcc
Confidence 35789999999999999999998876655577666443
|
|
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.29 Score=43.08 Aligned_cols=118 Identities=18% Similarity=0.257 Sum_probs=69.9
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHH--H---HHHhc---CchhHHHHhhcCcCCCCce
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQR--V---EELFE---SPVFDALKTLRGKSILQKI 100 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~r--l---~~~~~---~~~f~~l~~~~~~~~~~~v 100 (543)
++++|+|.| .|-+|+.+++.|.+.|. .++.+.+...-..+-..| + +++-. ..+-++|++.+ | .-++
T Consensus 1 r~~~v~iiG-~G~vGs~va~~L~~~Gv--~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~n-p--~~~v 74 (135)
T PF00899_consen 1 RNKRVLIIG-AGGVGSEVAKNLARSGV--GKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEIN-P--DVEV 74 (135)
T ss_dssp HT-EEEEES-TSHHHHHHHHHHHHHTT--SEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHS-T--TSEE
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHhCC--CceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhc-C--ceee
Confidence 357999999 58899999999999965 688887765321100000 0 00000 01122333333 3 2457
Q ss_pred EEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecC
Q psy7538 101 QVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTA 175 (543)
Q Consensus 101 ~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~ 175 (543)
..+..++++ +....+++++|+||.|... .. ....+-+.|++. + ..+|+.++.
T Consensus 75 ~~~~~~~~~-------~~~~~~~~~~d~vi~~~d~------~~--------~~~~l~~~~~~~-~-~p~i~~~~~ 126 (135)
T PF00899_consen 75 EAIPEKIDE-------ENIEELLKDYDIVIDCVDS------LA--------ARLLLNEICREY-G-IPFIDAGVN 126 (135)
T ss_dssp EEEESHCSH-------HHHHHHHHTSSEEEEESSS------HH--------HHHHHHHHHHHT-T--EEEEEEEE
T ss_pred eeeeccccc-------ccccccccCCCEEEEecCC------HH--------HHHHHHHHHHHc-C-CCEEEEEee
Confidence 777777733 4678888999999988643 11 123466788887 4 378887765
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.32 Score=49.31 Aligned_cols=115 Identities=12% Similarity=0.206 Sum_probs=73.2
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCH-HHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTP-NQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~-~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
++|.|.|+ |.+|+.++..|+..|. ..+|.++.|....... ...+++.. ...........+
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~-~~ei~l~D~~~~~~~~~a~dL~~~~-------------~~~~~~~~i~~~---- 61 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGI-ADELVLIDINEEKAEGEALDLEDAL-------------AFLPSPVKIKAG---- 61 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEeCCcchhhHhHhhHHHHh-------------hccCCCeEEEcC----
Confidence 47999995 9999999999998863 2378999986543211 11111110 000112222211
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEec
Q psy7538 110 LKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIST 174 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 174 (543)
+.+. ++++|+||.+++..+- .++..+.++.|..-.+.+.+..++. +.+.+|.+=|
T Consensus 62 --------~~~~-l~~aDIVIitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~-~~~~~vivvs 117 (306)
T cd05291 62 --------DYSD-CKDADIVVITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKAS-GFDGIFLVAS 117 (306)
T ss_pred --------CHHH-hCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEec
Confidence 1333 4799999999997643 3455678899999999999999887 4455544444
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >KOG1494|consensus | Back alignment and domain information |
|---|
Probab=95.05 E-value=0.26 Score=48.20 Aligned_cols=120 Identities=14% Similarity=0.178 Sum_probs=78.4
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecC-CCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRT-KKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~-~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++-+|.|.||.|-||+-|. -|++.+|.|....+-+-. ..|..+ .+..| |-
T Consensus 27 ~~~KVAvlGAaGGIGQPLS-LLlK~np~Vs~LaLYDi~~~~GVaa--------------------------DlSHI--~T 77 (345)
T KOG1494|consen 27 RGLKVAVLGAAGGIGQPLS-LLLKLNPLVSELALYDIANTPGVAA--------------------------DLSHI--NT 77 (345)
T ss_pred CcceEEEEecCCccCccHH-HHHhcCcccceeeeeecccCCcccc--------------------------ccccc--CC
Confidence 4568999999999999985 466677887765444322 222211 11111 11
Q ss_pred CCCCCCCC-HHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccc
Q psy7538 108 TQLKLGIS-EIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCH 178 (543)
Q Consensus 108 ~~~~lgls-~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~ 178 (543)
...-.|.. ++.++..++++|+|+--||..+- .-..++.+++|-.-.+.|..++.++ -.+..|.+=|--+|
T Consensus 78 ~s~V~g~~g~~~L~~al~~advVvIPAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~-cP~A~i~vIsNPVN 149 (345)
T KOG1494|consen 78 NSSVVGFTGADGLENALKGADVVVIPAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKC-CPNALILVISNPVN 149 (345)
T ss_pred CCceeccCChhHHHHHhcCCCEEEecCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhh-CccceeEeecCccc
Confidence 11111222 34789999999999999998764 3445678999999999999998886 45666666554343
|
|
| >PLN02602 lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.44 Score=49.18 Aligned_cols=114 Identities=14% Similarity=0.167 Sum_probs=72.3
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
++|.|+|+ |.+|+.++-.|+..+ -..++.++++.++... ....++.+. ........+..+ .
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~-l~~el~LiDi~~~~~~--g~a~DL~~~-----------~~~~~~~~i~~~--~-- 98 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQD-LADELALVDVNPDKLR--GEMLDLQHA-----------AAFLPRTKILAS--T-- 98 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC-CCCEEEEEeCCCchhh--HHHHHHHhh-----------hhcCCCCEEEeC--C--
Confidence 69999996 999999999988774 3457888888653221 111122211 111122222211 0
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEE
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYI 172 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~v 172 (543)
+.+. ++++|+||-+|+..+- .++..+.+..|+.-.+.+.+..++. +.+.++.+
T Consensus 99 -------dy~~-~~daDiVVitAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~-~p~~iviv 152 (350)
T PLN02602 99 -------DYAV-TAGSDLCIVTAGARQIPGESRLNLLQRNVALFRKIIPELAKY-SPDTILLI 152 (350)
T ss_pred -------CHHH-hCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEE
Confidence 2333 6899999999997543 3455678889999999999888886 44444333
|
|
| >TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent | Back alignment and domain information |
|---|
Probab=94.97 E-value=0.39 Score=50.11 Aligned_cols=125 Identities=16% Similarity=0.146 Sum_probs=75.0
Q ss_pred hhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcC-----EEEEE--ecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCC
Q psy7538 24 IAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVK-----KIYLL--MRTKKGKTPNQRVEELFESPVFDALKTLRGKSI 96 (543)
Q Consensus 24 i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~-----~V~~l--~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~ 96 (543)
+...-+.-+|.|+||+|.+|.+++-.|+..+- +. .++++ .+.++. ++....++.+... + .
T Consensus 38 ~~~~~~p~KV~IIGAaG~VG~~~A~~l~~~~l-~~~~~ei~L~L~diD~~~~~--a~g~a~DL~d~a~---------~-~ 104 (387)
T TIGR01757 38 TKSWKKTVNVAVSGAAGMISNHLLFMLASGEV-FGQDQPIALKLLGSERSKEA--LEGVAMELEDSLY---------P-L 104 (387)
T ss_pred HhcCCCCeEEEEECCCcHHHHHHHHHHHhccc-cCCCCceEEEEeccCccchh--hhHHHHHHHHhhh---------h-h
Confidence 33344456899999999999999999987742 22 23333 443322 1111222222110 1 1
Q ss_pred CCceEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEec
Q psy7538 97 LQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIST 174 (543)
Q Consensus 97 ~~~v~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 174 (543)
..++.+..+| . ..++++|+||-+|+..+- .++..+.+..|+.-.+.+.+...+..+...+|.+-|
T Consensus 105 ~~~v~i~~~~------------y-~~~kdaDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVs 170 (387)
T TIGR01757 105 LREVSIGIDP------------Y-EVFEDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVG 170 (387)
T ss_pred cCceEEecCC------------H-HHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcC
Confidence 1233222222 2 345899999999998653 456677899999999999999988533455444444
|
This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized. |
| >cd05290 LDH_3 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=94.94 E-value=0.43 Score=48.42 Aligned_cols=115 Identities=13% Similarity=0.162 Sum_probs=75.2
Q ss_pred EEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCC-CCceEEEEccCCCC
Q psy7538 32 SIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSI-LQKIQVISGDITQL 110 (543)
Q Consensus 32 ~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~-~~~v~~i~gDl~~~ 110 (543)
+|.|.|+ |.+|..++..|+..+ -+.++.+++..++.. +....++.+.. +-. ..++....+|
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~-~~~elvL~Di~~~~a--~g~a~DL~~~~----------~~~~~~~~~i~~~~---- 62 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALG-LFSEIVLIDVNEGVA--EGEALDFHHAT----------ALTYSTNTKIRAGD---- 62 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcC-CCCEEEEEeCCcchh--hHHHHHHHhhh----------ccCCCCCEEEEECC----
Confidence 5789997 999999999998874 346888888754322 11122222111 111 1234444333
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCCC-ccc--HHHHHHHHHHHHHHHHHHHHhccCCceEEEEec
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIRF-DEP--IKTAVILNTRGTRDMLELSKQMKNLKCFTYIST 174 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~--~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 174 (543)
+ ..++++|+|+-+|+..+- .++ -.+.++.|+.-.+.+.+...+. +...++.+-|
T Consensus 63 --------y-~~~~~aDivvitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~-~p~~i~ivvs 119 (307)
T cd05290 63 --------Y-DDCADADIIVITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKV-TKEAVIILIT 119 (307)
T ss_pred --------H-HHhCCCCEEEECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEec
Confidence 2 345799999999997653 333 3678899999999999999887 5566665555
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=94.90 E-value=0.25 Score=52.86 Aligned_cols=36 Identities=17% Similarity=0.248 Sum_probs=30.7
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
++||+|+|||++| +|...++.|.+.|. +|.+..+..
T Consensus 3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~---~V~~~d~~~ 38 (447)
T PRK02472 3 YQNKKVLVLGLAK-SGYAAAKLLHKLGA---NVTVNDGKP 38 (447)
T ss_pred cCCCEEEEEeeCH-HHHHHHHHHHHCCC---EEEEEcCCC
Confidence 4689999999988 99999999999986 677777654
|
|
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=94.86 E-value=0.24 Score=46.79 Aligned_cols=124 Identities=18% Similarity=0.270 Sum_probs=74.4
Q ss_pred chhhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHH-----HHHHhc---CchhHHHHhhcC
Q psy7538 22 DRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQR-----VEELFE---SPVFDALKTLRG 93 (543)
Q Consensus 22 ~~i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~r-----l~~~~~---~~~f~~l~~~~~ 93 (543)
.+-++-.++++|+|.|+.| +|..+++.|.+.| |++|.+++...-..+-..| -+++-+ ....++|++.+
T Consensus 13 ~e~Q~~L~~s~VlIiG~gg-lG~evak~La~~G--Vg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lN- 88 (197)
T cd01492 13 LEAQKRLRSARILLIGLKG-LGAEIAKNLVLSG--IGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALN- 88 (197)
T ss_pred HHHHHHHHhCcEEEEcCCH-HHHHHHHHHHHcC--CCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHC-
Confidence 4456678889999999777 9999999999986 4688888765322110000 001000 11234455544
Q ss_pred cCCCCceEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEe
Q psy7538 94 KSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIS 173 (543)
Q Consensus 94 ~~~~~~v~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vS 173 (543)
|.. +++.+...+++ .....++++|+|+-+... .+.. ..+-++|++. ++ .||+.+
T Consensus 89 p~v--~i~~~~~~~~~--------~~~~~~~~~dvVi~~~~~------~~~~--------~~ln~~c~~~-~i-p~i~~~ 142 (197)
T cd01492 89 PRV--KVSVDTDDISE--------KPEEFFSQFDVVVATELS------RAEL--------VKINELCRKL-GV-KFYATG 142 (197)
T ss_pred CCC--EEEEEecCccc--------cHHHHHhCCCEEEECCCC------HHHH--------HHHHHHHHHc-CC-CEEEEE
Confidence 442 56666555542 234567899999966432 2222 2344788887 54 678888
Q ss_pred cC
Q psy7538 174 TA 175 (543)
Q Consensus 174 T~ 175 (543)
+.
T Consensus 143 ~~ 144 (197)
T cd01492 143 VH 144 (197)
T ss_pred ec
Confidence 76
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >PTZ00117 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.77 E-value=0.43 Score=48.76 Aligned_cols=117 Identities=18% Similarity=0.198 Sum_probs=72.6
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
+.++|.|.|| |.+|..+...|...| +..|.++++.+..... +.+ ++... . ........+ .+ +
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~--~~~l~L~Di~~~~~~g-~~l-Dl~~~---------~-~~~~~~~~i-~~--~ 65 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKN--LGDVVLYDVIKGVPQG-KAL-DLKHF---------S-TLVGSNINI-LG--T 65 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCC--CCeEEEEECCCccchh-HHH-HHhhh---------c-cccCCCeEE-Ee--C
Confidence 5689999997 999999988887775 3478888886543321 111 11000 0 000111111 11 1
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCce-EEEEe
Q psy7538 109 QLKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKC-FTYIS 173 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~-~V~vS 173 (543)
.+++ .++++|+|+-+|+..+. .....+.+..|..-.+.+.+...+. ..+. ++.+|
T Consensus 66 --------~d~~-~l~~ADiVVitag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~-~p~a~vivvs 122 (319)
T PTZ00117 66 --------NNYE-DIKDSDVVVITAGVQRKEEMTREDLLTINGKIMKSVAESVKKY-CPNAFVICVT 122 (319)
T ss_pred --------CCHH-HhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEec
Confidence 1455 55899999999987653 3455667888888888888888776 4455 55554
|
|
| >cd05292 LDH_2 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=94.76 E-value=0.46 Score=48.27 Aligned_cols=115 Identities=15% Similarity=0.171 Sum_probs=72.7
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|.|.|+ |.+|..++..|++.|. ..+|.+++|..... .....++.+.. + .........+
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~-~~ev~l~D~~~~~~--~g~a~dl~~~~----------~-~~~~~~i~~~----- 60 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGL-ASEIVLVDINKAKA--EGEAMDLAHGT----------P-FVKPVRIYAG----- 60 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCC-CCEEEEEECCchhh--hhHHHHHHccc----------c-ccCCeEEeeC-----
Confidence 57999997 9999999999999873 34788888865321 11111221110 0 1111222211
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEec
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIST 174 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 174 (543)
+.+ .++++|+||-+|+...- ..+..+....|+.-.+.+.+..++. +.+.++.+-|
T Consensus 61 -------d~~-~l~~aDiViita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~-~~~giiiv~t 116 (308)
T cd05292 61 -------DYA-DCKGADVVVITAGANQKPGETRLDLLKRNVAIFKEIIPQILKY-APDAILLVVT 116 (308)
T ss_pred -------CHH-HhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEec
Confidence 233 36899999999987542 3455567888999989888888876 4455555444
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd05293 LDH_1 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=94.72 E-value=0.57 Score=47.65 Aligned_cols=113 Identities=13% Similarity=0.101 Sum_probs=73.1
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEE-ccCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVIS-GDITQ 109 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~-gDl~~ 109 (543)
++|.|+|+ |.+|..++-.|+..+ -..++.++++.++.. ..-..++.+... ......+.. +
T Consensus 4 ~Ki~IiGa-G~VG~~~a~~l~~~~-~~~el~LiD~~~~~~--~g~a~Dl~~~~~-----------~~~~~~v~~~~---- 64 (312)
T cd05293 4 NKVTVVGV-GQVGMACAISILAKG-LADELVLVDVVEDKL--KGEAMDLQHGSA-----------FLKNPKIEADK---- 64 (312)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcC-CCCEEEEEeCCccHH--HHHHHHHHHhhc-----------cCCCCEEEECC----
Confidence 58999996 999999999888775 345888888765321 111122222110 111112222 2
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEE
Q psy7538 110 LKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYI 172 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~v 172 (543)
+++. ++++|+||-+|+..+- .++..+.+..|..-.+.+.+..++. +.+.++.+
T Consensus 65 --------dy~~-~~~adivvitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~-~p~~~viv 118 (312)
T cd05293 65 --------DYSV-TANSKVVIVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKY-SPNAILLV 118 (312)
T ss_pred --------CHHH-hCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEE
Confidence 2443 5899999999997653 3456678899999999999999887 44544433
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=94.70 E-value=0.21 Score=43.80 Aligned_cols=92 Identities=22% Similarity=0.301 Sum_probs=63.0
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
++++|++.| +| -|..+++.|.+.|+ +|.+++.++. +++.. ....+.++.+|+.
T Consensus 16 ~~~kileIG-~G-fG~~vA~~L~~~G~---~ViaIDi~~~------aV~~a----------------~~~~~~~v~dDlf 68 (134)
T PRK04148 16 KNKKIVELG-IG-FYFKVAKKLKESGF---DVIVIDINEK------AVEKA----------------KKLGLNAFVDDLF 68 (134)
T ss_pred cCCEEEEEE-ec-CCHHHHHHHHHCCC---EEEEEECCHH------HHHHH----------------HHhCCeEEECcCC
Confidence 357899999 67 68889999999886 7888887653 12111 0125789999999
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEE
Q psy7538 109 QLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFT 170 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V 170 (543)
++++ .+-+++|.|+-+ +....+. .-++++|++. +..-+|
T Consensus 69 ~p~~--------~~y~~a~liysi----rpp~el~----------~~~~~la~~~-~~~~~i 107 (134)
T PRK04148 69 NPNL--------EIYKNAKLIYSI----RPPRDLQ----------PFILELAKKI-NVPLII 107 (134)
T ss_pred CCCH--------HHHhcCCEEEEe----CCCHHHH----------HHHHHHHHHc-CCCEEE
Confidence 9984 456789999854 2222221 4578999998 555443
|
|
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=94.67 E-value=0.24 Score=47.97 Aligned_cols=125 Identities=15% Similarity=0.173 Sum_probs=74.4
Q ss_pred chhhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHH-----HHHhc---CchhHHHHhhcC
Q psy7538 22 DRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRV-----EELFE---SPVFDALKTLRG 93 (543)
Q Consensus 22 ~~i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl-----~~~~~---~~~f~~l~~~~~ 93 (543)
.+-++-+++++|+|.| .|-+|+++++.|.+.|. +++.+.+...-..+...|- +++-+ ..+-++|++.+
T Consensus 13 ~~~q~~L~~~~VlivG-~GglGs~va~~La~~Gv--g~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~n- 88 (228)
T cd00757 13 EEGQEKLKNARVLVVG-AGGLGSPAAEYLAAAGV--GKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAIN- 88 (228)
T ss_pred HHHHHHHhCCcEEEEC-CCHHHHHHHHHHHHcCC--CEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhC-
Confidence 4456778889999999 57899999999999864 6787775543211111110 00000 11223333333
Q ss_pred cCCCCceEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEe
Q psy7538 94 KSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIS 173 (543)
Q Consensus 94 ~~~~~~v~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vS 173 (543)
|. -++..+..+++ .++...+++++|+||-|.... +. -..+-++|++. + ..+|+.+
T Consensus 89 p~--~~i~~~~~~i~-------~~~~~~~~~~~DvVi~~~d~~------~~--------r~~l~~~~~~~-~-ip~i~~g 143 (228)
T cd00757 89 PD--VEIEAYNERLD-------AENAEELIAGYDLVLDCTDNF------AT--------RYLINDACVKL-G-KPLVSGA 143 (228)
T ss_pred CC--CEEEEecceeC-------HHHHHHHHhCCCEEEEcCCCH------HH--------HHHHHHHHHHc-C-CCEEEEE
Confidence 22 24555555543 346778889999999886532 11 12456778876 4 5778877
Q ss_pred cC
Q psy7538 174 TA 175 (543)
Q Consensus 174 T~ 175 (543)
+.
T Consensus 144 ~~ 145 (228)
T cd00757 144 VL 145 (228)
T ss_pred ec
Confidence 65
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=94.62 E-value=0.26 Score=51.51 Aligned_cols=123 Identities=15% Similarity=0.167 Sum_probs=72.2
Q ss_pred hhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHH-----HHHhc---CchhHHHHhhcCcC
Q psy7538 24 IAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRV-----EELFE---SPVFDALKTLRGKS 95 (543)
Q Consensus 24 i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl-----~~~~~---~~~f~~l~~~~~~~ 95 (543)
-++-+++++|+|.|+ |-+|+.+++.|.+.|. .++.++++..-..+...|- .++-. ..+-+++++.+ |.
T Consensus 129 ~q~~l~~~~VlvvG~-GG~Gs~ia~~La~~Gv--g~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~n-p~ 204 (376)
T PRK08762 129 GQRRLLEARVLLIGA-GGLGSPAALYLAAAGV--GTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALN-PD 204 (376)
T ss_pred HHHHHhcCcEEEECC-CHHHHHHHHHHHHcCC--CeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHC-CC
Confidence 345678899999985 7799999999999864 6898888863211111110 00000 01122333333 22
Q ss_pred CCCceEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecC
Q psy7538 96 ILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTA 175 (543)
Q Consensus 96 ~~~~v~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~ 175 (543)
-++..+...++. +....+++++|+||.+.... ..- ..+-++|++. + ..+|+.++.
T Consensus 205 --v~v~~~~~~~~~-------~~~~~~~~~~D~Vv~~~d~~------~~r--------~~ln~~~~~~-~-ip~i~~~~~ 259 (376)
T PRK08762 205 --VQVEAVQERVTS-------DNVEALLQDVDVVVDGADNF------PTR--------YLLNDACVKL-G-KPLVYGAVF 259 (376)
T ss_pred --CEEEEEeccCCh-------HHHHHHHhCCCEEEECCCCH------HHH--------HHHHHHHHHc-C-CCEEEEEec
Confidence 234445444433 35677888999999987532 111 1255778887 4 578888765
|
|
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=94.57 E-value=0.08 Score=48.64 Aligned_cols=36 Identities=19% Similarity=0.317 Sum_probs=30.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRT 66 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~ 66 (543)
++|++|+|.|+++.+|+.+++.|.+.|. +|++..|.
T Consensus 42 l~gk~vlViG~G~~~G~~~a~~L~~~g~---~V~v~~r~ 77 (168)
T cd01080 42 LAGKKVVVVGRSNIVGKPLAALLLNRNA---TVTVCHSK 77 (168)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHhhCCC---EEEEEECC
Confidence 5789999999977889999999999864 67777663
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form | Back alignment and domain information |
|---|
Probab=94.55 E-value=0.64 Score=46.87 Aligned_cols=150 Identities=17% Similarity=0.183 Sum_probs=81.7
Q ss_pred EEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCCC
Q psy7538 32 SIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQLK 111 (543)
Q Consensus 32 ~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~~ 111 (543)
+|.|.||||+.|..|++.|.+. |+++-+.+..++. + ++
T Consensus 3 ~v~IvGasGy~G~el~rlL~~H-P~~el~~l~s~~~---------------------------------------~-~~- 40 (310)
T TIGR01851 3 KVFIDGEAGTTGLQIRERLSGR-DDIELLSIAPDRR---------------------------------------K-DA- 40 (310)
T ss_pred eEEEECCCChhHHHHHHHHhCC-CCeEEEEEecccc---------------------------------------c-Cc-
Confidence 7999999999999999999887 8874333322211 0 01
Q ss_pred CCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCcccccccCC
Q psy7538 112 LGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLP 191 (543)
Q Consensus 112 lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i~E~~y~~ 191 (543)
.+.+.+++++|+||-++... . +..++..+.+. + .++|=.|+++-..+. -.|--
T Consensus 41 -----~~~~~~~~~~D~vFlalp~~-------~--------s~~~~~~~~~~-g-~~VIDlSadfRl~~~-----~~ygl 93 (310)
T TIGR01851 41 -----AERAKLLNAADVAILCLPDD-------A--------AREAVSLVDNP-N-TCIIDASTAYRTADD-----WAYGF 93 (310)
T ss_pred -----CCHhHhhcCCCEEEECCCHH-------H--------HHHHHHHHHhC-C-CEEEECChHHhCCCC-----CeEEc
Confidence 12445667899999776431 1 12344444443 4 368888887654331 12221
Q ss_pred CCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCC-cEEEEecCeeeecCCCC
Q psy7538 192 PDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGM-PCMILRPSIVVPIYKEP 261 (543)
Q Consensus 192 p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~l-p~~IlRps~V~G~~~~p 261 (543)
|. ++.+..+.+....+-.-|+.|+.+=.++=.=+.+... ... .+++-=-|.+-|.++.+
T Consensus 94 PE-----------ln~~~~~~i~~a~lIAnPgC~aTa~~LaL~PL~~~~li~~~~~~~~~a~SG~SGAGr~~ 154 (310)
T TIGR01851 94 PE-----------LAPGQREKIRNSKRIANPGCYPTGFIALMRPLVEAGILPADFPITINAVSGYSGGGKAM 154 (310)
T ss_pred cc-----------cCHHHHHhhccCCEEECCCCHHHHHHHHHHHHHHcCCccccceEEEEeccccCccChhh
Confidence 11 1112223333333444678888777666555544322 111 34444445555665543
|
This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment. |
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=94.54 E-value=0.37 Score=47.07 Aligned_cols=125 Identities=15% Similarity=0.133 Sum_probs=75.4
Q ss_pred chhhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHH-----HHHhc---CchhHHHHhhcC
Q psy7538 22 DRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRV-----EELFE---SPVFDALKTLRG 93 (543)
Q Consensus 22 ~~i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl-----~~~~~---~~~f~~l~~~~~ 93 (543)
.+-++-.++.+|+|.| .|-+|+.+++.|.+.| |.++.+++...-..+...|- .++=. ...-++|++.+
T Consensus 16 ~~~q~~L~~~~VlvvG-~GglGs~va~~La~~G--vg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~in- 91 (240)
T TIGR02355 16 FDGQEALKASRVLIVG-LGGLGCAASQYLAAAG--VGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQIN- 91 (240)
T ss_pred HHHHHHHhCCcEEEEC-cCHHHHHHHHHHHHcC--CCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHC-
Confidence 3456778889999999 5789999999999986 56888887765332221111 00000 01123444433
Q ss_pred cCCCCceEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEe
Q psy7538 94 KSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIS 173 (543)
Q Consensus 94 ~~~~~~v~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vS 173 (543)
|. -+++.+...++ .+....++++.|+||.+... .+. ...+-++|.+. + ..+|+.+
T Consensus 92 p~--v~i~~~~~~i~-------~~~~~~~~~~~DlVvd~~D~------~~~--------r~~ln~~~~~~-~-ip~v~~~ 146 (240)
T TIGR02355 92 PH--IAINPINAKLD-------DAELAALIAEHDIVVDCTDN------VEV--------RNQLNRQCFAA-K-VPLVSGA 146 (240)
T ss_pred CC--cEEEEEeccCC-------HHHHHHHhhcCCEEEEcCCC------HHH--------HHHHHHHHHHc-C-CCEEEEE
Confidence 32 24555444333 34577888999999988643 111 12345788876 4 5677766
Q ss_pred cC
Q psy7538 174 TA 175 (543)
Q Consensus 174 T~ 175 (543)
+.
T Consensus 147 ~~ 148 (240)
T TIGR02355 147 AI 148 (240)
T ss_pred ec
Confidence 55
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=94.41 E-value=0.35 Score=46.92 Aligned_cols=129 Identities=14% Similarity=0.110 Sum_probs=76.1
Q ss_pred chhhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHH-----HHHhc----CchhHHHHhhc
Q psy7538 22 DRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRV-----EELFE----SPVFDALKTLR 92 (543)
Q Consensus 22 ~~i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl-----~~~~~----~~~f~~l~~~~ 92 (543)
.+-++-.++.+|+|.|+ |-+|+.+++.|.+.|. +++++++...-..+...|- +++-. ...-+++++-+
T Consensus 19 ~~~q~~L~~~~VlIiG~-GGlGs~ia~~La~~Gv--g~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~n 95 (231)
T PRK08328 19 VEGQEKLKKAKVAVVGV-GGLGSPVAYYLAAAGV--GRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFN 95 (231)
T ss_pred HHHHHHHhCCcEEEECC-CHHHHHHHHHHHHcCC--CEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhC
Confidence 45567788899999995 7799999999999864 6888887654332211110 00000 00112333333
Q ss_pred CcCCCCceEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEE
Q psy7538 93 GKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYI 172 (543)
Q Consensus 93 ~~~~~~~v~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~v 172 (543)
|. -++..+.+.++ ++....++++.|+||.|.... +.- ..+-++|++. + ..+|+.
T Consensus 96 -p~--v~v~~~~~~~~-------~~~~~~~l~~~D~Vid~~d~~------~~r--------~~l~~~~~~~-~-ip~i~g 149 (231)
T PRK08328 96 -SD--IKIETFVGRLS-------EENIDEVLKGVDVIVDCLDNF------ETR--------YLLDDYAHKK-G-IPLVHG 149 (231)
T ss_pred -CC--CEEEEEeccCC-------HHHHHHHHhcCCEEEECCCCH------HHH--------HHHHHHHHHc-C-CCEEEE
Confidence 32 34555555443 345777889999999876431 111 1244678776 4 567887
Q ss_pred ecCcccc
Q psy7538 173 STAYCHP 179 (543)
Q Consensus 173 ST~y~~~ 179 (543)
++....+
T Consensus 150 ~~~g~~G 156 (231)
T PRK08328 150 AVEGTYG 156 (231)
T ss_pred eeccCEE
Confidence 7764433
|
|
| >cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family | Back alignment and domain information |
|---|
Probab=94.38 E-value=0.41 Score=47.40 Aligned_cols=116 Identities=15% Similarity=0.112 Sum_probs=72.6
Q ss_pred EEEEcCcchhHHHHHHHHHhhCC-CcCEEEEEecCCCCCCH-HHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 33 IFLSGGSGFLGKVLIEKILRLEP-NVKKIYLLMRTKKGKTP-NQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 33 VlITGatGFiG~~Lv~~Ll~~g~-~v~~V~~l~R~~~~~~~-~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|.|.||+|.+|..++..|+..+. ...+|++.++.+..... ...+++... + . ....+.. ++
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~------------~-~-~~~~i~~---~~- 62 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVE------------P-L-ADIKVSI---TD- 62 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhh------------h-c-cCcEEEE---CC-
Confidence 57899999999999999998861 23488888886533221 112222110 1 0 1111111 11
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCCCc-ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEec
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIRFD-EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIST 174 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 174 (543)
|+...++++|+|+-+|+..+.. .........|+.-.+.+.+..++. ....++.+=|
T Consensus 63 -------d~~~~~~~aDiVv~t~~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~-~p~a~~i~~t 119 (263)
T cd00650 63 -------DPYEAFKDADVVIITAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKY-SPDAWIIVVS 119 (263)
T ss_pred -------chHHHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEec
Confidence 4556678999999999876543 334457788999999999888876 4444443333
|
Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains |
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=94.34 E-value=0.63 Score=46.11 Aligned_cols=128 Identities=13% Similarity=0.162 Sum_probs=73.7
Q ss_pred hhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcC--------chhHHHHhhcCcC
Q psy7538 24 IAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFES--------PVFDALKTLRGKS 95 (543)
Q Consensus 24 i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~--------~~f~~l~~~~~~~ 95 (543)
-++-+++.+|+|.| .|-+|+++++.|.+.| |.+|.+++...-..+...|---.+.+ .+-+++.+-+ |.
T Consensus 24 ~~~kL~~s~VlVvG-~GGVGs~vae~Lar~G--Vg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~IN-P~ 99 (268)
T PRK15116 24 ALQLFADAHICVVG-IGGVGSWAAEALARTG--IGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQIN-PE 99 (268)
T ss_pred HHHHhcCCCEEEEC-cCHHHHHHHHHHHHcC--CCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHC-CC
Confidence 34567889999999 5889999999999996 46888877653222111111000000 1233444333 32
Q ss_pred CCCceEEEEccCCCCCCCCCHHHHHHHhc-CccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEec
Q psy7538 96 ILQKIQVISGDITQLKLGISEIDKKELID-NVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIST 174 (543)
Q Consensus 96 ~~~~v~~i~gDl~~~~lgls~~~~~~l~~-~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 174 (543)
-++..+..-+ +++....++. +.|+||.+..... .-..|.+.|++. + ..||.+..
T Consensus 100 --~~V~~i~~~i-------~~e~~~~ll~~~~D~VIdaiD~~~--------------~k~~L~~~c~~~-~-ip~I~~gG 154 (268)
T PRK15116 100 --CRVTVVDDFI-------TPDNVAEYMSAGFSYVIDAIDSVR--------------PKAALIAYCRRN-K-IPLVTTGG 154 (268)
T ss_pred --cEEEEEeccc-------ChhhHHHHhcCCCCEEEEcCCCHH--------------HHHHHHHHHHHc-C-CCEEEECC
Confidence 2444443222 2335666664 6999998765321 123477888887 4 46676666
Q ss_pred CccccC
Q psy7538 175 AYCHPS 180 (543)
Q Consensus 175 ~y~~~~ 180 (543)
+.+..+
T Consensus 155 ag~k~d 160 (268)
T PRK15116 155 AGGQID 160 (268)
T ss_pred cccCCC
Confidence 654443
|
|
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.24 E-value=0.24 Score=50.32 Aligned_cols=33 Identities=18% Similarity=0.289 Sum_probs=29.3
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
++|.|.| +|++|..++..|++.|+ +|.+..|++
T Consensus 3 ~~V~VIG-~G~mG~~iA~~la~~G~---~V~v~d~~~ 35 (308)
T PRK06129 3 GSVAIIG-AGLIGRAWAIVFARAGH---EVRLWDADP 35 (308)
T ss_pred cEEEEEC-ccHHHHHHHHHHHHCCC---eeEEEeCCH
Confidence 5799999 89999999999999987 688888875
|
|
| >COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.21 E-value=0.12 Score=52.36 Aligned_cols=38 Identities=21% Similarity=0.379 Sum_probs=31.9
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
+++|.|.||||-+|+.+++.|-++.+.+..+.++...+
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~r 38 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLASAR 38 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEeccc
Confidence 36899999999999999999999778887677666544
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=94.09 E-value=0.26 Score=52.84 Aligned_cols=72 Identities=17% Similarity=0.305 Sum_probs=52.6
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|+|.|+ |.+|+.+++.|.+.|+ .|.++.|++. +++.+ + ...++..+.||.+++
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~---~v~vid~~~~------~~~~~---------~------~~~~~~~~~gd~~~~ 55 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENN---DVTVIDTDEE------RLRRL---------Q------DRLDVRTVVGNGSSP 55 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC---cEEEEECCHH------HHHHH---------H------hhcCEEEEEeCCCCH
Confidence 58999997 9999999999999886 6777877542 22221 0 012578899999876
Q ss_pred CCCCCHHHHHHH-hcCccEEEEcC
Q psy7538 111 KLGISEIDKKEL-IDNVDIVYHVA 133 (543)
Q Consensus 111 ~lgls~~~~~~l-~~~vd~ViH~A 133 (543)
. .+..+ ++++|.|+-+.
T Consensus 56 ~------~l~~~~~~~a~~vi~~~ 73 (453)
T PRK09496 56 D------VLREAGAEDADLLIAVT 73 (453)
T ss_pred H------HHHHcCCCcCCEEEEec
Confidence 5 67766 77899988654
|
|
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=94.07 E-value=0.39 Score=49.83 Aligned_cols=125 Identities=12% Similarity=0.104 Sum_probs=75.7
Q ss_pred chhhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHH-----HHHhc---CchhHHHHhhcC
Q psy7538 22 DRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRV-----EELFE---SPVFDALKTLRG 93 (543)
Q Consensus 22 ~~i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl-----~~~~~---~~~f~~l~~~~~ 93 (543)
.+-++-+++.+|+|.|+ |-+|+.+++.|.+.| |+++.+++...-..+-..|- +++=. ...-++|++.+
T Consensus 20 ~~~q~~L~~~~VlivG~-GGlGs~~a~~La~~G--vg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~n- 95 (355)
T PRK05597 20 QQGQQSLFDAKVAVIGA-GGLGSPALLYLAGAG--VGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALN- 95 (355)
T ss_pred HHHHHHHhCCeEEEECC-CHHHHHHHHHHHHcC--CCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHC-
Confidence 44566788899999996 779999999999985 46888887764221111110 00000 01223444444
Q ss_pred cCCCCceEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEe
Q psy7538 94 KSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIS 173 (543)
Q Consensus 94 ~~~~~~v~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vS 173 (543)
|. -+++.+...++. +....+++++|+|+.|.... .. -..+-++|.+. + ..||+.+
T Consensus 96 p~--v~v~~~~~~i~~-------~~~~~~~~~~DvVvd~~d~~------~~--------r~~~n~~c~~~-~-ip~v~~~ 150 (355)
T PRK05597 96 PD--VKVTVSVRRLTW-------SNALDELRDADVILDGSDNF------DT--------RHLASWAAARL-G-IPHVWAS 150 (355)
T ss_pred CC--cEEEEEEeecCH-------HHHHHHHhCCCEEEECCCCH------HH--------HHHHHHHHHHc-C-CCEEEEE
Confidence 33 246666555553 34667789999999887431 11 12245678876 4 4688877
Q ss_pred cC
Q psy7538 174 TA 175 (543)
Q Consensus 174 T~ 175 (543)
+.
T Consensus 151 ~~ 152 (355)
T PRK05597 151 IL 152 (355)
T ss_pred Ee
Confidence 65
|
|
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=93.97 E-value=1.2 Score=42.22 Aligned_cols=98 Identities=17% Similarity=0.236 Sum_probs=60.4
Q ss_pred chhhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHH----HHHhc---CchhHHHHhhcCc
Q psy7538 22 DRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRV----EELFE---SPVFDALKTLRGK 94 (543)
Q Consensus 22 ~~i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl----~~~~~---~~~f~~l~~~~~~ 94 (543)
.+.++-++.++|+|.|+ |-+|+.+++.|.+.|. .+|++.++..-..+...|- +++-+ ...-++|...+ |
T Consensus 13 ~~~q~~L~~~~V~IvG~-GglGs~ia~~La~~Gv--g~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~in-p 88 (200)
T TIGR02354 13 PKIVQKLEQATVAICGL-GGLGSNVAINLARAGI--GKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEIN-P 88 (200)
T ss_pred HHHHHHHhCCcEEEECc-CHHHHHHHHHHHHcCC--CEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHC-C
Confidence 45667788999999996 7799999999999864 5788887762111111110 01100 00112233323 2
Q ss_pred CCCCceEEEEccCCCCCCCCCHHHHHHHhcCccEEEEc
Q psy7538 95 SILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHV 132 (543)
Q Consensus 95 ~~~~~v~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~ 132 (543)
. -++..+..+++. +.+..+++++|+|+-+
T Consensus 89 ~--~~i~~~~~~i~~-------~~~~~~~~~~DlVi~a 117 (200)
T TIGR02354 89 Y--TEIEAYDEKITE-------ENIDKFFKDADIVCEA 117 (200)
T ss_pred C--CEEEEeeeeCCH-------hHHHHHhcCCCEEEEC
Confidence 2 355666666654 3577888999999987
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >PRK08040 putative semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.96 E-value=1.1 Score=45.86 Aligned_cols=160 Identities=17% Similarity=0.192 Sum_probs=85.9
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecC-CCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc-c
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRT-KKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG-D 106 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~-~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g-D 106 (543)
+.++|.|.||||++|..|++-|.++.+.+.+|..+... ..|+ ++.+ .+ |
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~----------------------------~~~~-~~~~ 53 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGE----------------------------TLRF-GGKS 53 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCc----------------------------eEEE-CCcc
Confidence 56799999999999999999888754444577766543 2222 1111 11 1
Q ss_pred CCCCCCCCCHHHHHH-HhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCccc
Q psy7538 107 ITQLKLGISEIDKKE-LIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLE 185 (543)
Q Consensus 107 l~~~~lgls~~~~~~-l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i~ 185 (543)
+.-. +.+. .++++|+||-++... .+..+...+.+. ++ ++|=.|+++-..+..
T Consensus 54 ~~v~-------~~~~~~~~~~Dvvf~a~p~~---------------~s~~~~~~~~~~-g~-~VIDlS~~fRl~~~v--- 106 (336)
T PRK08040 54 VTVQ-------DAAEFDWSQAQLAFFVAGRE---------------ASAAYAEEATNA-GC-LVIDSSGLFALEPDV--- 106 (336)
T ss_pred eEEE-------eCchhhccCCCEEEECCCHH---------------HHHHHHHHHHHC-CC-EEEECChHhcCCCCC---
Confidence 1100 1111 226799999877431 123345555444 43 577788776544321
Q ss_pred ccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCc-EEEEecCeeeecCC
Q psy7538 186 ERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMP-CMILRPSIVVPIYK 259 (543)
Q Consensus 186 E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp-~~IlRps~V~G~~~ 259 (543)
.|--|. +..+.++.+....+-.-||.|+..=.++=.=+.+.. ++. +++-=-+.|-|.++
T Consensus 107 --P~~lPE-----------vn~~~l~~i~~~~iIAnPgC~~t~~~laL~PL~~~~--~i~~viV~t~qgvSGAG~ 166 (336)
T PRK08040 107 --PLVVPE-----------VNPFVLADYRNRNIIAVADSLTSQLLTAIKPLIDQA--GLSRLHVTNLLSASAHGK 166 (336)
T ss_pred --ceEccc-----------cCHHHHhhhccCCEEECCCHHHHHHHHHHHHHHHhC--CCeEEEEEeeccccccCh
Confidence 122111 122233333333344567999887776655554432 342 44444455555544
|
|
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=93.86 E-value=0.88 Score=44.09 Aligned_cols=126 Identities=13% Similarity=0.140 Sum_probs=74.0
Q ss_pred hhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHH-----HHHhc---CchhHHHHhhcCcCC
Q psy7538 25 AKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRV-----EELFE---SPVFDALKTLRGKSI 96 (543)
Q Consensus 25 ~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl-----~~~~~---~~~f~~l~~~~~~~~ 96 (543)
++-+++.+|+|.| .|-+|+++++.|.+.| |.++++++...-..+...|- .++=+ ..+-++|++-+ |.
T Consensus 6 ~~~L~~~~VlVvG-~GGvGs~va~~Lar~G--Vg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~in-P~- 80 (231)
T cd00755 6 LEKLRNAHVAVVG-LGGVGSWAAEALARSG--VGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDIN-PE- 80 (231)
T ss_pred HHHHhCCCEEEEC-CCHHHHHHHHHHHHcC--CCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHC-CC-
Confidence 4567789999999 5779999999999986 46888877654222111111 00000 11233444434 32
Q ss_pred CCceEEEEccCCCCCCCCCHHHHHHHhc-CccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecC
Q psy7538 97 LQKIQVISGDITQLKLGISEIDKKELID-NVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTA 175 (543)
Q Consensus 97 ~~~v~~i~gDl~~~~lgls~~~~~~l~~-~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~ 175 (543)
-+++.+...++.. ....++. +.|+||.|.... ..-..+.+.|++. + ..||...++
T Consensus 81 -~~V~~~~~~i~~~-------~~~~l~~~~~D~VvdaiD~~--------------~~k~~L~~~c~~~-~-ip~I~s~g~ 136 (231)
T cd00755 81 -CEVDAVEEFLTPD-------NSEDLLGGDPDFVVDAIDSI--------------RAKVALIAYCRKR-K-IPVISSMGA 136 (231)
T ss_pred -cEEEEeeeecCHh-------HHHHHhcCCCCEEEEcCCCH--------------HHHHHHHHHHHHh-C-CCEEEEeCC
Confidence 3566666555532 3555554 699999875431 1223467888887 4 466666665
Q ss_pred cccc
Q psy7538 176 YCHP 179 (543)
Q Consensus 176 y~~~ 179 (543)
....
T Consensus 137 g~~~ 140 (231)
T cd00755 137 GGKL 140 (231)
T ss_pred cCCC
Confidence 5433
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK07877 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=93.72 E-value=0.35 Score=54.54 Aligned_cols=128 Identities=11% Similarity=0.073 Sum_probs=79.7
Q ss_pred chhhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHH----HHhc---CchhHHHHhhcCc
Q psy7538 22 DRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVE----ELFE---SPVFDALKTLRGK 94 (543)
Q Consensus 22 ~~i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~----~~~~---~~~f~~l~~~~~~ 94 (543)
.+-++-.++.+|+|.|+ | +|+++++.|.+.|- +.++++.+...-..+...|.. ++-. ...-+++.+-+ |
T Consensus 99 ~~~Q~~L~~~~V~IvG~-G-lGs~~a~~LaraGv-vG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~in-p 174 (722)
T PRK07877 99 AEEQERLGRLRIGVVGL-S-VGHAIAHTLAAEGL-CGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELD-P 174 (722)
T ss_pred HHHHHHHhcCCEEEEEe-c-HHHHHHHHHHHccC-CCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHC-C
Confidence 45567788999999999 8 99999999999862 257888877654444444521 0000 00122333323 2
Q ss_pred CCCCceEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEec
Q psy7538 95 SILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIST 174 (543)
Q Consensus 95 ~~~~~v~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 174 (543)
. -+|+.+...++. +.+..+++++|+|+.|.-. ++. =..+-+.|.+. + ..+|+-|+
T Consensus 175 ~--i~v~~~~~~i~~-------~n~~~~l~~~DlVvD~~D~------~~~--------R~~ln~~a~~~-~-iP~i~~~~ 229 (722)
T PRK07877 175 Y--LPVEVFTDGLTE-------DNVDAFLDGLDVVVEECDS------LDV--------KVLLREAARAR-R-IPVLMATS 229 (722)
T ss_pred C--CEEEEEeccCCH-------HHHHHHhcCCCEEEECCCC------HHH--------HHHHHHHHHHc-C-CCEEEEcC
Confidence 2 356666665553 4688999999999988632 111 12344677776 4 46777776
Q ss_pred Cccc
Q psy7538 175 AYCH 178 (543)
Q Consensus 175 ~y~~ 178 (543)
+.+.
T Consensus 230 ~~g~ 233 (722)
T PRK07877 230 DRGL 233 (722)
T ss_pred CCCC
Confidence 5543
|
|
| >PRK06223 malate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=93.42 E-value=1.1 Score=45.53 Aligned_cols=116 Identities=18% Similarity=0.141 Sum_probs=68.6
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
.++|.|.|| |.+|..++..+...|.. +|++.++..... .....++.+. .. .. ..... ++.
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~~--ev~L~D~~~~~~--~~~~~dl~~~-----~~----~~-~~~~~-----i~~ 61 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKELG--DVVLFDIVEGVP--QGKALDIAEA-----AP----VE-GFDTK-----ITG 61 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCe--EEEEEECCCchh--HHHHHHHHhh-----hh----hc-CCCcE-----EEe
Confidence 379999998 99999999999887542 788888854321 1111111110 00 00 00111 111
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCccCC-CcccHHHHHHHHHHHHHHHHHHHHhccCCce-EEEEe
Q psy7538 110 LKLGISEIDKKELIDNVDIVYHVAATIR-FDEPIKTAVILNTRGTRDMLELSKQMKNLKC-FTYIS 173 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~ViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~-~V~vS 173 (543)
.. +++ .++++|+||-+++... ...+..+.+.-|+.-.+.+++...+. ..+. +|.+|
T Consensus 62 ~~------d~~-~~~~aDiVii~~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~-~~~~~viv~t 119 (307)
T PRK06223 62 TN------DYE-DIAGSDVVVITAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKY-APDAIVIVVT 119 (307)
T ss_pred CC------CHH-HHCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEec
Confidence 01 343 3589999999987654 23445567778888888888877765 3333 44443
|
|
| >PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=93.38 E-value=2.3 Score=43.19 Aligned_cols=152 Identities=16% Similarity=0.140 Sum_probs=82.5
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
..+|.|.||||++|..|++.|.+. |++ ++..+..+.. . |+.
T Consensus 2 ~~~VaIvGAtGy~G~eLlrlL~~h-p~~-~l~~~~s~~~-------------------------~-----------~~~- 42 (313)
T PRK11863 2 KPKVFIDGEAGTTGLQIRERLAGR-SDI-ELLSIPEAKR-------------------------K-----------DAA- 42 (313)
T ss_pred CcEEEEECCCCHHHHHHHHHHhcC-CCe-EEEEEecCCC-------------------------C-----------ccc-
Confidence 358999999999999999977776 776 5555543321 0 111
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCccccccc
Q psy7538 110 LKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTY 189 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i~E~~y 189 (543)
+.+..++++|+||-+.... . ...+...+.+. +. ++|=.|+++-..+.- .|
T Consensus 43 --------~~~~~~~~~DvvFlalp~~-------~--------s~~~~~~~~~~-g~-~VIDlSadfRl~~~~-----~y 92 (313)
T PRK11863 43 --------ARRELLNAADVAILCLPDD-------A--------AREAVALIDNP-AT-RVIDASTAHRTAPGW-----VY 92 (313)
T ss_pred --------CchhhhcCCCEEEECCCHH-------H--------HHHHHHHHHhC-CC-EEEECChhhhcCCCC-----eE
Confidence 1223456899999766321 1 12334444443 43 678888876543311 22
Q ss_pred CCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCC-cEEEEecCeeeecCCCC
Q psy7538 190 LPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGM-PCMILRPSIVVPIYKEP 261 (543)
Q Consensus 190 ~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~l-p~~IlRps~V~G~~~~p 261 (543)
--|. ++.+..+.+....+-.-|+.|+.+=.++=.=+.+..- ... .+++-=-+.+-|+++.+
T Consensus 93 glPE-----------vn~~~~~~i~~~~~IanPgC~~Ta~~laL~PL~~~~li~~~~~i~i~a~SG~SGAG~~~ 155 (313)
T PRK11863 93 GFPE-----------LAPGQRERIAAAKRVANPGCYPTGAIALLRPLVDAGLLPADYPVSINAVSGYSGGGKAM 155 (313)
T ss_pred EcCc-----------cCHHHHHHhhcCCeEEcCCcHHHHHHHHHHHHHHcCCcccCceEEEEEccccccCCccc
Confidence 1111 1112223333333445678898877766555554321 111 34444445566776654
|
|
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.35 E-value=0.61 Score=45.03 Aligned_cols=71 Identities=27% Similarity=0.394 Sum_probs=51.7
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|++.|.| .|-+|..+++.|.+.|+ .|.++.+.+ +++++.. ........+.||-+++
T Consensus 1 m~iiIiG-~G~vG~~va~~L~~~g~---~Vv~Id~d~------~~~~~~~--------------~~~~~~~~v~gd~t~~ 56 (225)
T COG0569 1 MKIIIIG-AGRVGRSVARELSEEGH---NVVLIDRDE------ERVEEFL--------------ADELDTHVVIGDATDE 56 (225)
T ss_pred CEEEEEC-CcHHHHHHHHHHHhCCC---ceEEEEcCH------HHHHHHh--------------hhhcceEEEEecCCCH
Confidence 5788888 59999999999999998 567777764 3332211 1113577889999987
Q ss_pred CCCCCHHHHHHH-hcCccEEEE
Q psy7538 111 KLGISEIDKKEL-IDNVDIVYH 131 (543)
Q Consensus 111 ~lgls~~~~~~l-~~~vd~ViH 131 (543)
+ .++++ ++++|+++=
T Consensus 57 ~------~L~~agi~~aD~vva 72 (225)
T COG0569 57 D------VLEEAGIDDADAVVA 72 (225)
T ss_pred H------HHHhcCCCcCCEEEE
Confidence 6 57766 678999983
|
|
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=93.01 E-value=2.1 Score=37.86 Aligned_cols=116 Identities=17% Similarity=0.153 Sum_probs=66.8
Q ss_pred EEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHH----HHHhc----CchhHHHHhhcCcCCCCceEEE
Q psy7538 32 SIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRV----EELFE----SPVFDALKTLRGKSILQKIQVI 103 (543)
Q Consensus 32 ~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl----~~~~~----~~~f~~l~~~~~~~~~~~v~~i 103 (543)
+|+|.|+ |-+|+.+++.|.+.|. +++.+.+...-..+-..|- .+-.. ..+-+++++.+ | .-+++.+
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv--~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~-p--~v~i~~~ 74 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGV--GKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELN-P--GVNVTAV 74 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCC--CEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHC-C--CcEEEEE
Confidence 5889996 8899999999999875 5788776553211111110 00000 01122333322 2 2345555
Q ss_pred EccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCc
Q psy7538 104 SGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAY 176 (543)
Q Consensus 104 ~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y 176 (543)
..++... .....+++.|+||-|.... + ....+.++|++. + ..+|.+++..
T Consensus 75 ~~~~~~~-------~~~~~~~~~diVi~~~d~~------~--------~~~~l~~~~~~~-~-i~~i~~~~~g 124 (143)
T cd01483 75 PEGISED-------NLDDFLDGVDLVIDAIDNI------A--------VRRALNRACKEL-G-IPVIDAGGLG 124 (143)
T ss_pred eeecChh-------hHHHHhcCCCEEEECCCCH------H--------HHHHHHHHHHHc-C-CCEEEEcCCC
Confidence 5555443 2466778999999887541 1 124466888887 4 5677777763
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >PRK06728 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.99 E-value=0.26 Score=50.58 Aligned_cols=38 Identities=21% Similarity=0.392 Sum_probs=28.4
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHh-hCCCcCEEEEEecC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILR-LEPNVKKIYLLMRT 66 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~-~g~~v~~V~~l~R~ 66 (543)
++++|.|.||||++|+.|++-|.+ ....+.++..+...
T Consensus 4 ~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~ 42 (347)
T PRK06728 4 KGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSK 42 (347)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECc
Confidence 347899999999999999998874 33444456666543
|
|
| >PTZ00082 L-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.90 E-value=2.3 Score=43.46 Aligned_cols=116 Identities=19% Similarity=0.151 Sum_probs=71.8
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEE-ccC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVIS-GDI 107 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~-gDl 107 (543)
+.++|.|.| +|.+|..++..++..|. ..|+++++.+.... .++++ +... . ........+.. +
T Consensus 5 ~~~KI~IIG-aG~vG~~ia~~la~~gl--~~i~LvDi~~~~~~-~~~ld-~~~~-----~-----~~~~~~~~I~~~~-- 67 (321)
T PTZ00082 5 KRRKISLIG-SGNIGGVMAYLIVLKNL--GDVVLFDIVKNIPQ-GKALD-ISHS-----N-----VIAGSNSKVIGTN-- 67 (321)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCC--CeEEEEeCCCchhh-HHHHH-HHhh-----h-----hccCCCeEEEECC--
Confidence 457999999 59999999998887754 36888888765421 12221 1110 0 00111122221 2
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCccCCC-cc-----cHHHHHHHHHHHHHHHHHHHHhccCCc-eEEEEe
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAATIRF-DE-----PIKTAVILNTRGTRDMLELSKQMKNLK-CFTYIS 173 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~-----~~~~~~~~Nv~gt~~ll~~a~~~~~l~-~~V~vS 173 (543)
+++ .++++|+||.+|+..+- .+ +..+.+..|+.-.+.+.+...+. ..+ .++.+|
T Consensus 68 ----------d~~-~l~~aDiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~-~p~a~~iv~s 128 (321)
T PTZ00082 68 ----------NYE-DIAGSDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKY-CPNAFVIVIT 128 (321)
T ss_pred ----------CHH-HhCCCCEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEec
Confidence 343 45899999999987542 22 55667888988888888888776 445 455554
|
|
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=92.86 E-value=0.31 Score=48.72 Aligned_cols=35 Identities=20% Similarity=0.302 Sum_probs=30.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEec
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMR 65 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R 65 (543)
++||+|+|.|++|.+|+.++..|++.|. +|++.-|
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~~~ga---tVtv~~~ 191 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLLNANA---TVTICHS 191 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCC---EEEEEeC
Confidence 5799999999999999999999998874 6766655
|
|
| >TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial | Back alignment and domain information |
|---|
Probab=92.82 E-value=0.31 Score=50.27 Aligned_cols=38 Identities=18% Similarity=0.343 Sum_probs=30.2
Q ss_pred CEEEEEcCcchhHHHHHHHHH-hhCCCcCEEEEEecCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKIL-RLEPNVKKIYLLMRTKK 68 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll-~~g~~v~~V~~l~R~~~ 68 (543)
|+|.|.||||-+|+.+++.|. ++...+.+++.+.-++.
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s 39 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQL 39 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhh
Confidence 579999999999999999998 55555567777765543
|
|
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=92.59 E-value=0.88 Score=47.44 Aligned_cols=125 Identities=14% Similarity=0.189 Sum_probs=74.7
Q ss_pred chhhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHH-----HHHhc---CchhHHHHhhcC
Q psy7538 22 DRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRV-----EELFE---SPVFDALKTLRG 93 (543)
Q Consensus 22 ~~i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl-----~~~~~---~~~f~~l~~~~~ 93 (543)
.+-++-.++.+|+|.|+ |-+|+.+++.|.+.| |++|.+.+...-..+-..|- +++=. ...-++|++.+
T Consensus 33 ~~~q~~l~~~~VliiG~-GglG~~v~~~La~~G--vg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~n- 108 (370)
T PRK05600 33 IEQQERLHNARVLVIGA-GGLGCPAMQSLASAG--VGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQ- 108 (370)
T ss_pred HHHHHHhcCCcEEEECC-CHHHHHHHHHHHHcC--CCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHC-
Confidence 34466788899999995 779999999999986 46888887763221111110 00000 11223343333
Q ss_pred cCCCCceEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEe
Q psy7538 94 KSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIS 173 (543)
Q Consensus 94 ~~~~~~v~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vS 173 (543)
|. -+++.+...++. +....+++++|+||.|... .+. -..+-++|.+. + ..+|+.+
T Consensus 109 p~--v~i~~~~~~i~~-------~~~~~~~~~~DlVid~~Dn------~~~--------r~~in~~~~~~-~-iP~v~~~ 163 (370)
T PRK05600 109 PD--IRVNALRERLTA-------ENAVELLNGVDLVLDGSDS------FAT--------KFLVADAAEIT-G-TPLVWGT 163 (370)
T ss_pred CC--CeeEEeeeecCH-------HHHHHHHhCCCEEEECCCC------HHH--------HHHHHHHHHHc-C-CCEEEEE
Confidence 32 245565555543 3577788999999988643 111 12344677776 4 4678877
Q ss_pred cC
Q psy7538 174 TA 175 (543)
Q Consensus 174 T~ 175 (543)
..
T Consensus 164 ~~ 165 (370)
T PRK05600 164 VL 165 (370)
T ss_pred Ee
Confidence 65
|
|
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=92.44 E-value=0.45 Score=47.46 Aligned_cols=35 Identities=20% Similarity=0.344 Sum_probs=29.8
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEec
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMR 65 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R 65 (543)
++|++|+|.|+++.+|+.++..|++.|. +|+++-+
T Consensus 156 l~Gk~vvVIGrs~~VG~pla~lL~~~ga---tVtv~~s 190 (286)
T PRK14175 156 LEGKNAVVIGRSHIVGQPVSKLLLQKNA---SVTILHS 190 (286)
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCC---eEEEEeC
Confidence 5799999999999999999999998874 6665544
|
|
| >KOG4022|consensus | Back alignment and domain information |
|---|
Probab=92.36 E-value=7.6 Score=35.08 Aligned_cols=33 Identities=27% Similarity=0.292 Sum_probs=27.4
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEE
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYL 62 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~ 62 (543)
-.+|+|-||-|-+|+..++.+..+++-|..|.+
T Consensus 3 agrVivYGGkGALGSacv~~FkannywV~siDl 35 (236)
T KOG4022|consen 3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDL 35 (236)
T ss_pred CceEEEEcCcchHhHHHHHHHHhcCeEEEEEee
Confidence 358999999999999999999999885544443
|
|
| >PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated | Back alignment and domain information |
|---|
Probab=92.33 E-value=1.2 Score=46.93 Aligned_cols=123 Identities=12% Similarity=0.115 Sum_probs=73.4
Q ss_pred hhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHH--H---HHHhc---CchhHHHHhhcCcC
Q psy7538 24 IAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQR--V---EELFE---SPVFDALKTLRGKS 95 (543)
Q Consensus 24 i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~r--l---~~~~~---~~~f~~l~~~~~~~ 95 (543)
-++-+++.+|+|.|+ |-+|+.+++.|.+.|. ++|.+++...-..+-..| + .++=. ...-++|++.+ |.
T Consensus 36 ~q~~L~~~~VlviG~-GGlGs~va~~La~~Gv--g~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~n-p~ 111 (392)
T PRK07878 36 GQKRLKNARVLVIGA-GGLGSPTLLYLAAAGV--GTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEIN-PL 111 (392)
T ss_pred HHHHHhcCCEEEECC-CHHHHHHHHHHHHcCC--CeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhC-CC
Confidence 355678899999995 7799999999999864 678877765322211111 0 00100 01123344433 32
Q ss_pred CCCceEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecC
Q psy7538 96 ILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTA 175 (543)
Q Consensus 96 ~~~~v~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~ 175 (543)
-++..+...++.. ....+++++|+|+-|... ... -..+-++|.+. + +.||+.++.
T Consensus 112 --v~i~~~~~~i~~~-------~~~~~~~~~D~Vvd~~d~------~~~--------r~~ln~~~~~~-~-~p~v~~~~~ 166 (392)
T PRK07878 112 --VNVRLHEFRLDPS-------NAVELFSQYDLILDGTDN------FAT--------RYLVNDAAVLA-G-KPYVWGSIY 166 (392)
T ss_pred --cEEEEEeccCChh-------HHHHHHhcCCEEEECCCC------HHH--------HHHHHHHHHHc-C-CCEEEEEec
Confidence 2455566655542 466788999999987532 111 12245778887 4 568888776
|
|
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=91.81 E-value=1.9 Score=39.88 Aligned_cols=118 Identities=19% Similarity=0.148 Sum_probs=65.7
Q ss_pred EEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHH----HHHhc---CchhHHHHhhcCcCCCCceEEEE
Q psy7538 32 SIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRV----EELFE---SPVFDALKTLRGKSILQKIQVIS 104 (543)
Q Consensus 32 ~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl----~~~~~---~~~f~~l~~~~~~~~~~~v~~i~ 104 (543)
+|+|.|+ |-+|+.+++.|.+.|. .+|.+.+...-..+...|- +++-. ...-.+|++.+ |. -++..+.
T Consensus 1 ~VlViG~-GglGs~ia~~La~~Gv--g~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~ln-p~--v~i~~~~ 74 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARSGV--GNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREIN-PF--VKIEAIN 74 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCC--CeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHC-CC--CEEEEEE
Confidence 5889995 8899999999999864 6788888765211111110 01000 11122333333 22 3466665
Q ss_pred ccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCcc
Q psy7538 105 GDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYC 177 (543)
Q Consensus 105 gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~ 177 (543)
..++. +....+++++|+||.+... .+. -..+.+.|.+..+ ..||+.+....
T Consensus 75 ~~~~~-------~~~~~~l~~~DlVi~~~d~------~~~--------r~~i~~~~~~~~~-ip~i~~~~~~~ 125 (174)
T cd01487 75 IKIDE-------NNLEGLFGDCDIVVEAFDN------AET--------KAMLAESLLGNKN-KPVVCASGMAG 125 (174)
T ss_pred eecCh-------hhHHHHhcCCCEEEECCCC------HHH--------HHHHHHHHHHHCC-CCEEEEehhhc
Confidence 55543 3577788999999988432 111 1234555555423 56777654433
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.81 E-value=1 Score=43.97 Aligned_cols=38 Identities=24% Similarity=0.455 Sum_probs=32.5
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKK 68 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~ 68 (543)
.++|.|.|++|=+|+.+++.+.+. +++.=+-++.|+++
T Consensus 2 ~iki~V~Ga~GRMG~~ii~~v~~~-~~~~L~aa~~~~~~ 39 (266)
T COG0289 2 MIKVAVAGASGRMGRTLIRAVLEA-PDLELVAAFDRPGS 39 (266)
T ss_pred CceEEEEcCCChHHHHHHHHHhcC-CCceEEEEEecCCc
Confidence 578999999999999999999988 57766777788764
|
|
| >KOG1496|consensus | Back alignment and domain information |
|---|
Probab=91.74 E-value=2.7 Score=40.33 Aligned_cols=176 Identities=20% Similarity=0.180 Sum_probs=89.3
Q ss_pred CEEEEEcCcchhHHHHHHHHHhh---CCCcC-EEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRL---EPNVK-KIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~---g~~v~-~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
-+|+||||+|.||-+|+-.+.+- |++-- .+.+|.-++ .....+-+.--++...|-.|+. .+
T Consensus 5 irVlVtGAAGqI~ysll~~ia~G~vfG~dQPiiL~lLdi~~-~~~~LegV~mELqD~a~PlL~~--------------Vv 69 (332)
T KOG1496|consen 5 IRVLVTGAAGQIGYSLLPMIARGIVFGKDQPIILHLLDIPP-MMSVLEGVKMELQDCALPLLKG--------------VV 69 (332)
T ss_pred eEEEeecccchhhHHHHHHHcCceeecCCCceEEEeeCCch-HHHHHHHHHHHHHhhhhhHHHh--------------hh
Confidence 47999999999999999988763 22211 223333332 1122222222222222322221 11
Q ss_pred CCCCCCCCCHHHHHHHhcCccEEEEcCccCCCc-ccHHHHHHHHHHHHHHHHHHHHhc--cCCceEEEEecCccccCCCc
Q psy7538 107 ITQLKLGISEIDKKELIDNVDIVYHVAATIRFD-EPIKTAVILNTRGTRDMLELSKQM--KNLKCFTYISTAYCHPSEKV 183 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~-~~~~~~~~~Nv~gt~~ll~~a~~~--~~l~~~V~vST~y~~~~~~~ 183 (543)
.+. +-...++++|+.|-..|..+-. -..++.+..||.--+.=-.+..+. +++|.+|.---+-.|+ -.
T Consensus 70 att--------d~~~afkdv~~ailvGa~PR~eGMERkDll~~NvkIfk~Qg~AL~k~A~~~~KVlVVgNPaNTNa--li 139 (332)
T KOG1496|consen 70 ATT--------DEVEAFKDVDVAILVGAMPRREGMERKDLLSANVKIFKSQGAALEKYAKPNVKVLVVGNPANTNA--LI 139 (332)
T ss_pred ccc--------ChhhhhccCcEEEEeccccCcccchhhhHHhhcceeehhhhHHHHHhcCCCceEEEecCccccch--hH
Confidence 111 3456788999999998877643 234567778876433322222221 3566555322221111 11
Q ss_pred ccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCC
Q psy7538 184 LEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYK 259 (543)
Q Consensus 184 i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~ 259 (543)
..+ |.+.. |++ |.-+.|+..-.+.+.+.+. .|.|+.-+.--+|.|...
T Consensus 140 ~~k--~ApsI-P~k-------------------------Nfs~lTRLDhNRA~~QlA~klgv~~~~VkNviIWGNHS 188 (332)
T KOG1496|consen 140 LKK--FAPSI-PEK-------------------------NFSALTRLDHNRALAQLALKLGVPVSDVKNVIIWGNHS 188 (332)
T ss_pred Hhh--hCCCC-chh-------------------------cchhhhhhchhhHHHHHHHhhCCchhhcceeEEecccc
Confidence 111 11111 111 5555565555555555544 477887777777777644
|
|
| >PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=91.74 E-value=0.44 Score=49.33 Aligned_cols=37 Identities=16% Similarity=0.355 Sum_probs=28.2
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCc--CEEEEEecCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNV--KKIYLLMRTKK 68 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v--~~V~~l~R~~~ 68 (543)
++|.|.||||++|+.|++.|++. +++ .+++.+..+..
T Consensus 2 ~~VAIVGATG~vG~ell~llL~~-~~f~~~~l~~~ss~~s 40 (369)
T PRK06598 2 KKVGFVGWRGMVGSVLMQRMVEE-NDFDLIEPVFFSTSQA 40 (369)
T ss_pred eEEEEEeCCCHHHHHHHHHHHhC-CCCCcCcEEEecchhh
Confidence 58999999999999999977776 444 35666665543
|
|
| >TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=91.67 E-value=2.5 Score=42.80 Aligned_cols=106 Identities=18% Similarity=0.188 Sum_probs=66.2
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|.|.|+ |.+|..++..|+..|.. +|.++++...-. ..+..++.+...+ .....++.+ .+
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~g~~--~VvlvDi~~~l~--~g~a~d~~~~~~~--------~~~~~~i~~-t~----- 62 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEKELA--DLVLLDVVEGIP--QGKALDMYEASPV--------GGFDTKVTG-TN----- 62 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCCC--eEEEEeCCCChh--HHHHHhhhhhhhc--------cCCCcEEEe-cC-----
Confidence 68999996 99999999999988652 588888744321 1111122111000 000111111 11
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhc
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQM 163 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~ 163 (543)
+++. ++++|+||-+|+..+- +++..+....|..-.+.+++...+.
T Consensus 63 -------d~~~-~~~aDiVIitag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~ 108 (305)
T TIGR01763 63 -------NYAD-TANSDIVVITAGLPRKPGMSREDLLSMNAGIVREVTGRIMEH 108 (305)
T ss_pred -------CHHH-hCCCCEEEEcCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444 5899999999997653 3455567888999999998887776
|
The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable. |
| >PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=91.64 E-value=1.8 Score=46.58 Aligned_cols=42 Identities=21% Similarity=0.320 Sum_probs=34.7
Q ss_pred hhhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCC
Q psy7538 23 RIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKK 68 (543)
Q Consensus 23 ~i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~ 68 (543)
+..+|+.+++|+|.| .|-.|..+++.|.+.|+ +|.+.++.+.
T Consensus 7 ~~~~~~~~~~i~v~G-~G~sG~a~a~~L~~~G~---~V~~~D~~~~ 48 (458)
T PRK01710 7 EFKKFIKNKKVAVVG-IGVSNIPLIKFLVKLGA---KVTAFDKKSE 48 (458)
T ss_pred HHhhhhcCCeEEEEc-ccHHHHHHHHHHHHCCC---EEEEECCCCC
Confidence 456688899999999 68899999999999987 6777777653
|
|
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=91.62 E-value=0.13 Score=46.22 Aligned_cols=37 Identities=22% Similarity=0.341 Sum_probs=31.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
.++++|+|+|+ |.+|+.+++.|.+.| ..+|++..|+.
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g--~~~v~v~~r~~ 53 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELG--AAKIVIVNRTL 53 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCC--CCEEEEEcCCH
Confidence 56799999997 999999999999885 24788888864
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=91.62 E-value=0.54 Score=46.99 Aligned_cols=37 Identities=30% Similarity=0.435 Sum_probs=32.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
.++++|+|+|+ |-+|+.++..|...| +.+|++..|+.
T Consensus 121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g--~~~V~v~~R~~ 157 (278)
T PRK00258 121 LKGKRILILGA-GGAARAVILPLLDLG--VAEITIVNRTV 157 (278)
T ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcC--CCEEEEEeCCH
Confidence 56789999996 999999999999886 35899999974
|
|
| >PTZ00374 dihydroxyacetone phosphate acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=91.61 E-value=0.41 Score=54.77 Aligned_cols=75 Identities=16% Similarity=0.160 Sum_probs=45.8
Q ss_pred HHHHhcCceeEEeecCCcccccchHHHHHHHHHHH-hhhhcccCCC----CCCcEEEeecCCCCcccHHHHHHHHhhhhc
Q psy7538 276 LIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLF-TWDFLNSKES----ERKSVCNLTSNKDYKITWQEICDIGKDIVT 350 (543)
Q Consensus 276 ~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a-~~~~~~~~~~----~~~~vyni~s~~~~~~t~~e~~~~i~~~~G 350 (543)
..+...|..+.++..-....-++|+|-..++.+.+ ++.-.. +-. .....-.|+.+.++.+-|+-+.+.+.+++|
T Consensus 237 ~~~~a~g~~~~~p~~~~~p~~~~p~d~a~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~vwgm~~~ylm~yy~ 315 (1108)
T PTZ00374 237 CLGVALGTVKHLPVGFRDPATVTPLDVALNTALLAVLLLCHG-GLAECVECAAEMQLCGAPGDNSLVWGMVAEYLMDYYG 315 (1108)
T ss_pred HHHHhhhhhhcccccCCCCceeccHHHHHHHHHHHHHHHhcC-ChHHHhcchhhheeccCCccceeeHHHHHHHHHHHHh
Confidence 34455566666655555667788999887764443 333221 100 011233456556688999999999999985
Q ss_pred C
Q psy7538 351 S 351 (543)
Q Consensus 351 ~ 351 (543)
+
T Consensus 316 r 316 (1108)
T PTZ00374 316 R 316 (1108)
T ss_pred h
Confidence 4
|
|
| >PRK14852 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=91.43 E-value=1.2 Score=51.58 Aligned_cols=126 Identities=9% Similarity=0.081 Sum_probs=74.1
Q ss_pred hhhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHH-----HHHHhc---CchhHHHHhhcCc
Q psy7538 23 RIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQR-----VEELFE---SPVFDALKTLRGK 94 (543)
Q Consensus 23 ~i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~r-----l~~~~~---~~~f~~l~~~~~~ 94 (543)
+-++-+++.+|+|.| .|-+|+.+++.|.+.|- +++.+.+-..-..+...| ..++=+ ...-+++++-+ |
T Consensus 325 e~Q~kL~~srVlVvG-lGGlGs~ia~~LAraGV--G~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~IN-P 400 (989)
T PRK14852 325 AGQRRLLRSRVAIAG-LGGVGGIHLMTLARTGI--GNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVN-P 400 (989)
T ss_pred HHHHHHhcCcEEEEC-CcHHHHHHHHHHHHcCC--CeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHC-C
Confidence 345668889999999 57799999999999964 677777654322211111 011100 01222333333 3
Q ss_pred CCCCceEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEec
Q psy7538 95 SILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIST 174 (543)
Q Consensus 95 ~~~~~v~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 174 (543)
. -+|+.+...++. +....+++++|+||.|.-...++ .-+.+.+.|.+. + ..+|+.++
T Consensus 401 ~--v~I~~~~~~I~~-------en~~~fl~~~DiVVDa~D~~~~~------------~rr~l~~~c~~~-~-IP~I~ag~ 457 (989)
T PRK14852 401 F--LDIRSFPEGVAA-------ETIDAFLKDVDLLVDGIDFFALD------------IRRRLFNRALEL-G-IPVITAGP 457 (989)
T ss_pred C--CeEEEEecCCCH-------HHHHHHhhCCCEEEECCCCccHH------------HHHHHHHHHHHc-C-CCEEEeec
Confidence 2 356666555543 45788899999999765322111 113466778776 4 46777666
Q ss_pred C
Q psy7538 175 A 175 (543)
Q Consensus 175 ~ 175 (543)
.
T Consensus 458 ~ 458 (989)
T PRK14852 458 L 458 (989)
T ss_pred c
Confidence 4
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=91.43 E-value=1.6 Score=46.82 Aligned_cols=74 Identities=28% Similarity=0.355 Sum_probs=51.3
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
..++|+|.|+ |.+|+.+++.|.+.|+ .|+++.+.++ +++++ +. ....+.++.||.+
T Consensus 230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~---~v~vid~~~~------~~~~~---------~~-----~~~~~~~i~gd~~ 285 (453)
T PRK09496 230 PVKRVMIVGG-GNIGYYLAKLLEKEGY---SVKLIERDPE------RAEEL---------AE-----ELPNTLVLHGDGT 285 (453)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC---eEEEEECCHH------HHHHH---------HH-----HCCCCeEEECCCC
Confidence 3688999997 9999999999999876 6777776542 22221 11 1135678999999
Q ss_pred CCCCCCCHHHHH-HHhcCccEEEEc
Q psy7538 109 QLKLGISEIDKK-ELIDNVDIVYHV 132 (543)
Q Consensus 109 ~~~lgls~~~~~-~l~~~vd~ViH~ 132 (543)
+++ .+. .-+++++.|+-+
T Consensus 286 ~~~------~L~~~~~~~a~~vi~~ 304 (453)
T PRK09496 286 DQE------LLEEEGIDEADAFIAL 304 (453)
T ss_pred CHH------HHHhcCCccCCEEEEC
Confidence 875 453 334678988744
|
|
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=91.35 E-value=4.1 Score=34.33 Aligned_cols=69 Identities=26% Similarity=0.402 Sum_probs=46.6
Q ss_pred EEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCCCC
Q psy7538 33 IFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQLKL 112 (543)
Q Consensus 33 VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~~l 112 (543)
|+|.|. |-+|..+++.|.+.+. +|.++.+.+ ++.+.+ + ...+.++.||.++++
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~---~vvvid~d~------~~~~~~---------~-------~~~~~~i~gd~~~~~- 53 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGI---DVVVIDRDP------ERVEEL---------R-------EEGVEVIYGDATDPE- 53 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTS---EEEEEESSH------HHHHHH---------H-------HTTSEEEES-TTSHH-
T ss_pred eEEEcC-CHHHHHHHHHHHhCCC---EEEEEECCc------HHHHHH---------H-------hcccccccccchhhh-
Confidence 578885 7899999999999753 788888764 222222 1 124779999999876
Q ss_pred CCCHHHHHHH-hcCccEEEEcC
Q psy7538 113 GISEIDKKEL-IDNVDIVYHVA 133 (543)
Q Consensus 113 gls~~~~~~l-~~~vd~ViH~A 133 (543)
.++++ +++++.|+=+.
T Consensus 54 -----~l~~a~i~~a~~vv~~~ 70 (116)
T PF02254_consen 54 -----VLERAGIEKADAVVILT 70 (116)
T ss_dssp -----HHHHTTGGCESEEEEES
T ss_pred -----HHhhcCccccCEEEEcc
Confidence 45543 46788887554
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein | Back alignment and domain information |
|---|
Probab=91.32 E-value=1.1 Score=48.92 Aligned_cols=106 Identities=16% Similarity=0.180 Sum_probs=66.8
Q ss_pred hhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 26 KTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 26 ~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
+.|+..+|+|.| +|-+|++++-.|++.|. .+|.+++=..- .+...|+.++.+ +. .+..+.+.+-..
T Consensus 125 ~~qR~akVlVlG-~Gg~~s~lv~sL~~sG~--~~I~~vd~D~v-~SNlnRIgEl~e------~A----~~~n~~v~v~~i 190 (637)
T TIGR03693 125 ELSRNAKILAAG-SGDFLTKLVRSLIDSGF--PRFHAIVTDAE-EHALDRIHELAE------IA----EETDDALLVQEI 190 (637)
T ss_pred hhhhcccEEEEe-cCchHHHHHHHHHhcCC--CcEEEEecccc-chhhhHHHHHHH------HH----HHhCCCCceEec
Confidence 447889999999 56678999999999975 47777654433 344556544411 11 112234444444
Q ss_pred cCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhc
Q psy7538 106 DITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQM 163 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~ 163 (543)
|.+.. +++..++++.|+|++.+-.... .. ...+-++|.+.
T Consensus 191 ~~~~~------~dl~ev~~~~DiVi~vsDdy~~----~~--------Lr~lN~acvke 230 (637)
T TIGR03693 191 DFAED------QHLHEAFEPADWVLYVSDNGDI----DD--------LHALHAFCKEE 230 (637)
T ss_pred cCCcc------hhHHHhhcCCcEEEEECCCCCh----HH--------HHHHHHHHHHc
Confidence 44333 4899999999999998854321 11 24456677776
|
Members of this protein family are found in a three-gene operon in Bacillus anthracis and related Bacillus species, where the other two genes are clearly identified with maturation of a putative thiazole-containing bacteriocin precursor. While there is no detectable pairwise sequence similarity between members of this family and the proposed cyclodehydratases such as SagC of Streptococcus pyogenes (see family TIGR03603), both families show similarity through PSI-BLAST to ThiF, a protein involved in biosynthesis of the thiazole moiety for thiamine biosynthesis. This family, therefore, may contribute to cyclodehydratase function in heterocycle-containing bacteriocin biosyntheses. In Bacillus licheniformis ATCC 14580, the bacteriocin precursor gene is adjacent to the gene for this protein. |
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=91.00 E-value=0.65 Score=46.66 Aligned_cols=35 Identities=17% Similarity=0.281 Sum_probs=30.0
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEec
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMR 65 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R 65 (543)
++||+|.|.|.+|.+|+.++..|++.|. .|.+..|
T Consensus 157 l~Gk~V~vIG~s~ivG~PmA~~L~~~ga---tVtv~~~ 191 (301)
T PRK14194 157 LTGKHAVVIGRSNIVGKPMAALLLQAHC---SVTVVHS 191 (301)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCC---EEEEECC
Confidence 4699999999999999999999999986 6666544
|
|
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=90.93 E-value=0.87 Score=48.20 Aligned_cols=77 Identities=21% Similarity=0.386 Sum_probs=52.7
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+.|++|+|.|+ |-+|+.++..|...|. .+|++..|+.. |.+++.+ +. .....+
T Consensus 179 l~~kkvlviGa-G~~a~~va~~L~~~g~--~~I~V~nRt~~------ra~~La~---------~~-----~~~~~~---- 231 (414)
T PRK13940 179 ISSKNVLIIGA-GQTGELLFRHVTALAP--KQIMLANRTIE------KAQKITS---------AF-----RNASAH---- 231 (414)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHcCC--CEEEEECCCHH------HHHHHHH---------Hh-----cCCeEe----
Confidence 57899999996 9999999999998865 58999999742 2222211 10 001111
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCccCCC
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAATIRF 138 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~ 138 (543)
+.+++...+.++|+||+|.+...+
T Consensus 232 -------~~~~l~~~l~~aDiVI~aT~a~~~ 255 (414)
T PRK13940 232 -------YLSELPQLIKKADIIIAAVNVLEY 255 (414)
T ss_pred -------cHHHHHHHhccCCEEEECcCCCCe
Confidence 113677788899999999876543
|
|
| >PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF) | Back alignment and domain information |
|---|
Probab=90.79 E-value=1 Score=40.92 Aligned_cols=28 Identities=29% Similarity=0.405 Sum_probs=23.5
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEP 55 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~ 55 (543)
++||+|+|.|.++.+|+-|...|++++.
T Consensus 34 l~Gk~v~VvGrs~~VG~Pla~lL~~~~a 61 (160)
T PF02882_consen 34 LEGKKVVVVGRSNIVGKPLAMLLLNKGA 61 (160)
T ss_dssp TTT-EEEEE-TTTTTHHHHHHHHHHTT-
T ss_pred CCCCEEEEECCcCCCChHHHHHHHhCCC
Confidence 5799999999999999999999999875
|
Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A .... |
| >KOG0172|consensus | Back alignment and domain information |
|---|
Probab=90.72 E-value=0.38 Score=49.23 Aligned_cols=75 Identities=23% Similarity=0.376 Sum_probs=57.5
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+++||+.| +||+..-.++.|.+++ +| +|.+..|..+. .+++ ... ..++.|..|+.+
T Consensus 2 ~~~vlllg-sg~v~~p~~d~ls~~~-dv-~vtva~~~~~~---~~~~-----------------~~~-~~~~av~ldv~~ 57 (445)
T KOG0172|consen 2 KKGVLLLG-SGFVSRPVADFLSRKK-DV-NVTVASRTLKD---AEAL-----------------VKG-INIKAVSLDVAD 57 (445)
T ss_pred CcceEEec-CccccchHHHHHhhcC-Cc-eEEEehhhHHH---HHHH-----------------hcC-CCccceEEEccc
Confidence 57899999 7999999999999985 66 78888887543 1222 111 238899999999
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcC
Q psy7538 110 LKLGISEIDKKELIDNVDIVYHVA 133 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~ViH~A 133 (543)
+.+ .++...+..|.|+-+-
T Consensus 58 ~~~-----~L~~~v~~~D~viSLl 76 (445)
T KOG0172|consen 58 EEL-----ALRKEVKPLDLVISLL 76 (445)
T ss_pred hHH-----HHHhhhcccceeeeec
Confidence 864 7888889999998664
|
|
| >PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=90.67 E-value=0.68 Score=46.53 Aligned_cols=33 Identities=15% Similarity=0.298 Sum_probs=29.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEE
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLL 63 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l 63 (543)
++||+|.|.|.+|.+|+.++..|++.|. .|++.
T Consensus 156 ~~Gk~V~viGrs~~mG~PmA~~L~~~g~---tVtv~ 188 (296)
T PRK14188 156 LSGLNAVVIGRSNLVGKPMAQLLLAANA---TVTIA 188 (296)
T ss_pred CCCCEEEEEcCCcchHHHHHHHHHhCCC---EEEEE
Confidence 3799999999999999999999999986 56555
|
|
| >PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms [] | Back alignment and domain information |
|---|
Probab=90.63 E-value=1.2 Score=38.82 Aligned_cols=88 Identities=24% Similarity=0.332 Sum_probs=48.7
Q ss_pred EEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHh-------cCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 33 IFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELF-------ESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 33 VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~-------~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
|.|.|+||-||+..++-+.+. |+--+|+.|.-.+.-....+-.++.- +...++.++... +....++++..|
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~-~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~-~~~~~~~~v~~G 78 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKH-PDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKAL-PSKGPGIEVLSG 78 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHC-TTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHH-HHTTSSSEEEES
T ss_pred CEEEcCCcHHHHHHHHHHHhC-CCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHh-hhcCCCCEEEeC
Confidence 679999999999998877666 65558988887543211111111111 112334444433 222335555555
Q ss_pred cCCCCCCCCCHHHHHHHhc--CccEEEEc
Q psy7538 106 DITQLKLGISEIDKKELID--NVDIVYHV 132 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~--~vd~ViH~ 132 (543)
+ +.+.++++ ++|+|+..
T Consensus 79 ~----------~~l~~~~~~~~~D~vv~A 97 (129)
T PF02670_consen 79 P----------EGLEELAEEPEVDIVVNA 97 (129)
T ss_dssp H----------HHHHHHHTHTT-SEEEE-
T ss_pred h----------HHHHHHhcCCCCCEEEEe
Confidence 3 34666655 68888864
|
In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A .... |
| >cd00300 LDH_like L-lactate dehydrogenase-like enzymes | Back alignment and domain information |
|---|
Probab=90.62 E-value=5.4 Score=40.28 Aligned_cols=113 Identities=15% Similarity=0.137 Sum_probs=70.4
Q ss_pred EEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCH-HHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCCC
Q psy7538 33 IFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTP-NQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQLK 111 (543)
Q Consensus 33 VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~-~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~~ 111 (543)
|.|.|+ |.+|..++..|+..| -+.++.++++.+..... ...|++.. . ...+.....+ .
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~-~~~el~l~D~~~~~~~g~~~DL~~~~-------------~-~~~~~~i~~~---~-- 59 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKG-LASELVLVDVNEEKAKGDALDLSHAS-------------A-FLATGTIVRG---G-- 59 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcC-CCCEEEEEeCCccHHHHHHHhHHHhc-------------c-ccCCCeEEEC---C--
Confidence 457885 889999999888875 33478888886532111 11221110 1 1112222221 1
Q ss_pred CCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEec
Q psy7538 112 LGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIST 174 (543)
Q Consensus 112 lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 174 (543)
+. ..++++|+||-+|+..+- .++..+....|+.-.+.+.+..++. +.+.+|.+=|
T Consensus 60 ------~~-~~l~~aDiVIitag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~-~p~~~viv~s 115 (300)
T cd00300 60 ------DY-ADAADADIVVITAGAPRKPGETRLDLINRNAPILRSVITNLKKY-GPDAIILVVS 115 (300)
T ss_pred ------CH-HHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEcc
Confidence 22 356899999999997543 3455677889999999999999887 4555554444
|
Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot |
| >PRK14851 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=90.60 E-value=1.6 Score=49.14 Aligned_cols=126 Identities=12% Similarity=0.178 Sum_probs=74.3
Q ss_pred chhhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHH-----HHHHhc---CchhHHHHhhcC
Q psy7538 22 DRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQR-----VEELFE---SPVFDALKTLRG 93 (543)
Q Consensus 22 ~~i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~r-----l~~~~~---~~~f~~l~~~~~ 93 (543)
.+-++-+++.+|+|.| .|-+|+.+++.|.+.|. .++.+.+-..-..+...| ..++=. ...-+++++-+
T Consensus 35 ~e~Q~kL~~~~VlIvG-~GGlGs~va~~Lar~GV--G~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~in- 110 (679)
T PRK14851 35 PGEQERLAEAKVAIPG-MGGVGGVHLITMVRTGI--GRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSIN- 110 (679)
T ss_pred HHHHHHHhcCeEEEEC-cCHHHHHHHHHHHHhCC--CeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhC-
Confidence 4456778899999999 57799999999999964 577776654322111111 011100 00122333333
Q ss_pred cCCCCceEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEe
Q psy7538 94 KSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIS 173 (543)
Q Consensus 94 ~~~~~~v~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vS 173 (543)
| .-+|+.+...++. +++..+++++|+||.+.-...++. -..+.+.|++. ++ .+|+.+
T Consensus 111 P--~~~I~~~~~~i~~-------~n~~~~l~~~DvVid~~D~~~~~~------------r~~l~~~c~~~-~i-P~i~~g 167 (679)
T PRK14851 111 P--FLEITPFPAGINA-------DNMDAFLDGVDVVLDGLDFFQFEI------------RRTLFNMAREK-GI-PVITAG 167 (679)
T ss_pred C--CCeEEEEecCCCh-------HHHHHHHhCCCEEEECCCCCcHHH------------HHHHHHHHHHC-CC-CEEEee
Confidence 3 2466677666654 467888999999997653211111 12456788886 54 466655
Q ss_pred c
Q psy7538 174 T 174 (543)
Q Consensus 174 T 174 (543)
.
T Consensus 168 ~ 168 (679)
T PRK14851 168 P 168 (679)
T ss_pred c
Confidence 3
|
|
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=90.40 E-value=0.41 Score=46.01 Aligned_cols=34 Identities=29% Similarity=0.319 Sum_probs=29.7
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
|+|.|.||+|.+|+.++..|.+.|+ +|.+..|+.
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~---~V~v~~r~~ 34 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGN---KIIIGSRDL 34 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCC---EEEEEEcCH
Confidence 5799999999999999999999986 677777764
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >PRK06153 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=90.33 E-value=1.5 Score=45.43 Aligned_cols=120 Identities=14% Similarity=0.176 Sum_probs=69.0
Q ss_pred hhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHH------HHhc--C--c-hhHHHHhhc
Q psy7538 24 IAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVE------ELFE--S--P-VFDALKTLR 92 (543)
Q Consensus 24 i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~------~~~~--~--~-~f~~l~~~~ 92 (543)
+++-+++++|+|.|+ |-+|+.+++.|.+.| |.+|.+++-..-..+-..|.- ++-+ . . +-+++..
T Consensus 170 ~q~kL~~~~VaIVG~-GG~GS~Va~~LAR~G--VgeI~LVD~D~Ve~SNLnRQ~gaf~~~DvGk~~~KVevaa~rl~~-- 244 (393)
T PRK06153 170 LSAKLEGQRIAIIGL-GGTGSYILDLVAKTP--VREIHLFDGDDFLQHNAFRSPGAASIEELREAPKKVDYFKSRYSN-- 244 (393)
T ss_pred HHHHHhhCcEEEEcC-CccHHHHHHHHHHcC--CCEEEEECCCEecccccccccccCCHhHcCCcchHHHHHHHHHHH--
Confidence 467788999999995 779999999999996 568887765432221111211 1000 0 0 1112221
Q ss_pred CcCCCCceEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEE
Q psy7538 93 GKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYI 172 (543)
Q Consensus 93 ~~~~~~~v~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~v 172 (543)
...++..+...++. +.+. .+.++|+||-|.-. ..+-..+.++|.+. ++ .+|.+
T Consensus 245 ---in~~I~~~~~~I~~-------~n~~-~L~~~DiV~dcvDn--------------~~aR~~ln~~a~~~-gI-P~Id~ 297 (393)
T PRK06153 245 ---MRRGIVPHPEYIDE-------DNVD-ELDGFTFVFVCVDK--------------GSSRKLIVDYLEAL-GI-PFIDV 297 (393)
T ss_pred ---hCCeEEEEeecCCH-------HHHH-HhcCCCEEEEcCCC--------------HHHHHHHHHHHHHc-CC-CEEEe
Confidence 22356666555432 2344 56899999988742 11223355677776 43 56766
Q ss_pred ecC
Q psy7538 173 STA 175 (543)
Q Consensus 173 ST~ 175 (543)
+-.
T Consensus 298 G~~ 300 (393)
T PRK06153 298 GMG 300 (393)
T ss_pred eec
Confidence 654
|
|
| >PRK07411 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=89.88 E-value=3.2 Score=43.67 Aligned_cols=125 Identities=14% Similarity=0.098 Sum_probs=76.4
Q ss_pred chhhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHH--H---HHHhc---CchhHHHHhhcC
Q psy7538 22 DRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQR--V---EELFE---SPVFDALKTLRG 93 (543)
Q Consensus 22 ~~i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~r--l---~~~~~---~~~f~~l~~~~~ 93 (543)
.+-++-++..+|+|.|+ |-+|+.+++.|.+.| |.++.+.+...-..+-..| + +++=. ....++|++.+
T Consensus 30 ~~~q~~L~~~~VlivG~-GGlG~~va~~La~~G--vg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~n- 105 (390)
T PRK07411 30 LEGQKRLKAASVLCIGT-GGLGSPLLLYLAAAG--IGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEIN- 105 (390)
T ss_pred HHHHHHHhcCcEEEECC-CHHHHHHHHHHHHcC--CCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHC-
Confidence 34566788899999995 679999999999986 4688877765432221111 0 11100 11233444444
Q ss_pred cCCCCceEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEe
Q psy7538 94 KSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIS 173 (543)
Q Consensus 94 ~~~~~~v~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vS 173 (543)
|. -+++.+...++.. ....+++++|+|+.|... .+.- ..+-++|.+. + +.+|+.+
T Consensus 106 p~--v~v~~~~~~~~~~-------~~~~~~~~~D~Vvd~~d~------~~~r--------~~ln~~~~~~-~-~p~v~~~ 160 (390)
T PRK07411 106 PY--CQVDLYETRLSSE-------NALDILAPYDVVVDGTDN------FPTR--------YLVNDACVLL-N-KPNVYGS 160 (390)
T ss_pred CC--CeEEEEecccCHH-------hHHHHHhCCCEEEECCCC------HHHH--------HHHHHHHHHc-C-CCEEEEE
Confidence 33 3566776666643 466778999999988643 1111 1234677776 3 5778777
Q ss_pred cC
Q psy7538 174 TA 175 (543)
Q Consensus 174 T~ 175 (543)
..
T Consensus 161 ~~ 162 (390)
T PRK07411 161 IF 162 (390)
T ss_pred Ec
Confidence 66
|
|
| >PRK13243 glyoxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=89.68 E-value=1.1 Score=46.05 Aligned_cols=36 Identities=22% Similarity=0.312 Sum_probs=31.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
..||+|.|.| .|-||+.+++.|...|. +|.+..|..
T Consensus 148 L~gktvgIiG-~G~IG~~vA~~l~~~G~---~V~~~d~~~ 183 (333)
T PRK13243 148 VYGKTIGIIG-FGRIGQAVARRAKGFGM---RILYYSRTR 183 (333)
T ss_pred CCCCEEEEEC-cCHHHHHHHHHHHHCCC---EEEEECCCC
Confidence 5789999999 69999999999998875 778888764
|
|
| >PRK06901 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=89.10 E-value=1.1 Score=45.22 Aligned_cols=36 Identities=14% Similarity=0.173 Sum_probs=30.8
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRT 66 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~ 66 (543)
-.+|.| ||||-+|+.+++-|-++...+++++++.-.
T Consensus 3 ~~~iAi-GATg~VG~~~l~~Leer~fpv~~l~l~~s~ 38 (322)
T PRK06901 3 TLNIAI-AAEFELSEKLLEALEQSDLEIEQISIVEIE 38 (322)
T ss_pred cceEEE-ecCcHHHHHHHHHHHhcCCchhheeecccc
Confidence 457999 999999999999998888778888887654
|
|
| >smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain | Back alignment and domain information |
|---|
Probab=89.09 E-value=0.96 Score=38.89 Aligned_cols=30 Identities=20% Similarity=0.579 Sum_probs=24.4
Q ss_pred EEEEEcCcchhHHHHHHHHHhhCCCcCEEEEE
Q psy7538 32 SIFLSGGSGFLGKVLIEKILRLEPNVKKIYLL 63 (543)
Q Consensus 32 ~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l 63 (543)
+|.|+|++|.+|+.+++.|.+. +++ ++..+
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~-~~~-~l~av 30 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEH-PDF-EVVAL 30 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcC-CCc-eEEEE
Confidence 4789999999999999999886 455 45555
|
The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase. |
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=88.96 E-value=2.6 Score=39.96 Aligned_cols=34 Identities=21% Similarity=0.363 Sum_probs=29.4
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEec
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMR 65 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R 65 (543)
.+|++|+|.|| |=+|...++.|++.|. +|+++.+
T Consensus 8 l~~k~vLVIGg-G~va~~ka~~Ll~~ga---~V~VIs~ 41 (202)
T PRK06718 8 LSNKRVVIVGG-GKVAGRRAITLLKYGA---HIVVISP 41 (202)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCC---eEEEEcC
Confidence 57899999996 9999999999999986 6777665
|
|
| >cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins | Back alignment and domain information |
|---|
Probab=88.94 E-value=7.8 Score=39.09 Aligned_cols=109 Identities=18% Similarity=0.156 Sum_probs=64.1
Q ss_pred EEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCCCC
Q psy7538 33 IFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQLKL 112 (543)
Q Consensus 33 VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~~l 112 (543)
|.|.|| |.+|..++..|...+.. +|++.++........ ..++.+ .. ........+.. +.
T Consensus 1 I~IIGa-G~vG~~ia~~la~~~l~--eV~L~Di~e~~~~g~--~~dl~~-----~~-----~~~~~~~~I~~---t~--- 59 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLALKELG--DVVLLDIVEGLPQGK--ALDISQ-----AA-----PILGSDTKVTG---TN--- 59 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhCCCc--EEEEEeCCCcHHHHH--HHHHHH-----hh-----hhcCCCeEEEE---cC---
Confidence 468897 99999999988877543 788888875321111 111111 00 00011111111 00
Q ss_pred CCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceE
Q psy7538 113 GISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCF 169 (543)
Q Consensus 113 gls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~ 169 (543)
+.+. ++++|+||-+|+..+- ++...+.+..|+.-.+.+++...+. ..+..
T Consensus 60 -----d~~~-l~dADiVIit~g~p~~~~~~r~e~~~~n~~i~~~i~~~i~~~-~p~~~ 110 (300)
T cd01339 60 -----DYED-IAGSDVVVITAGIPRKPGMSRDDLLGTNAKIVKEVAENIKKY-APNAI 110 (300)
T ss_pred -----CHHH-hCCCCEEEEecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeE
Confidence 2333 5899999999986542 3444557778888888888877776 33444
|
Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas |
| >PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=88.93 E-value=0.97 Score=47.25 Aligned_cols=34 Identities=18% Similarity=0.429 Sum_probs=29.0
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEec
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMR 65 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R 65 (543)
..++|.|.||+|.+|+.++..|.+.|+ .|++..|
T Consensus 97 ~~~~I~IiGG~GlmG~slA~~l~~~G~---~V~~~d~ 130 (374)
T PRK11199 97 DLRPVVIVGGKGQLGRLFAKMLTLSGY---QVRILEQ 130 (374)
T ss_pred ccceEEEEcCCChhhHHHHHHHHHCCC---eEEEeCC
Confidence 347899999999999999999999987 5666655
|
|
| >TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=88.92 E-value=0.56 Score=48.35 Aligned_cols=33 Identities=12% Similarity=0.402 Sum_probs=25.9
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEec
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMR 65 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R 65 (543)
++|.|+||||++|++|++.|.+. +++ +|..+.+
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~-~~~-~l~~v~~ 33 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKH-PYF-ELAKVVA 33 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-CCc-eEEEEEE
Confidence 47999999999999999977776 555 5555543
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan. |
| >TIGR01771 L-LDH-NAD L-lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=88.75 E-value=6.3 Score=39.82 Aligned_cols=112 Identities=17% Similarity=0.141 Sum_probs=69.7
Q ss_pred EEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCCCCCC
Q psy7538 35 LSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQLKLGI 114 (543)
Q Consensus 35 ITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~~lgl 114 (543)
|.| +|.+|..++-.|+..+ -+.++.++++...... ....++.+.. .....++.+..+
T Consensus 1 iIG-aG~VG~~~a~~l~~~~-l~~el~L~Di~~~~~~--g~a~Dl~~~~----------~~~~~~~~i~~~--------- 57 (299)
T TIGR01771 1 IIG-AGNVGSSTAFALLNQG-IADEIVLIDINKDKAE--GEAMDLQHAA----------SFLPTPKKIRSG--------- 57 (299)
T ss_pred CCC-cCHHHHHHHHHHHhcC-CCCEEEEEeCCCChhh--HHHHHHHHhh----------cccCCCeEEecC---------
Confidence 346 5999999999988774 3457888888553221 1111221111 011122333222
Q ss_pred CHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEec
Q psy7538 115 SEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIST 174 (543)
Q Consensus 115 s~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 174 (543)
+. ..++++|+|+-+|+..+- ..+..+.++.|+.-.+.+.+..++. +.+.+|.+=|
T Consensus 58 ---~~-~~~~daDivVitag~~rk~g~~R~dll~~N~~i~~~~~~~i~~~-~p~~~vivvs 113 (299)
T TIGR01771 58 ---DY-SDCKDADLVVITAGAPQKPGETRLELVGRNVRIMKSIVPEVVKS-GFDGIFLVAT 113 (299)
T ss_pred ---CH-HHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEeC
Confidence 22 345899999999997653 3455678999999999999999887 5555544443
|
This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases. |
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=88.73 E-value=0.41 Score=48.10 Aligned_cols=36 Identities=14% Similarity=0.301 Sum_probs=31.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
..|++|+|.|+ |-+|+.+++.|...|. +|++..|+.
T Consensus 149 l~gk~v~IiG~-G~iG~avA~~L~~~G~---~V~v~~R~~ 184 (287)
T TIGR02853 149 IHGSNVMVLGF-GRTGMTIARTFSALGA---RVFVGARSS 184 (287)
T ss_pred CCCCEEEEEcC-hHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 46899999996 8899999999998875 788888864
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=88.58 E-value=1.6 Score=47.53 Aligned_cols=37 Identities=19% Similarity=0.441 Sum_probs=32.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
+.+++|+|.|+ |-+|..+++.|...|. .+|++..|+.
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~--~~V~V~nRs~ 300 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLVSKGC--TKMVVVNRSE 300 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHHhCCC--CeEEEEeCCH
Confidence 56899999997 9999999999998764 5799999875
|
|
| >PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=88.52 E-value=1.4 Score=43.92 Aligned_cols=32 Identities=16% Similarity=0.284 Sum_probs=27.7
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEE
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYL 62 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~ 62 (543)
++||+|.|.|.++.+|+-|+..|++.|. +|++
T Consensus 156 l~Gk~vvViGrs~iVGkPla~lL~~~~a---tVt~ 187 (285)
T PRK14189 156 LRGAHAVVIGRSNIVGKPMAMLLLQAGA---TVTI 187 (285)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCC---EEEE
Confidence 3799999999999999999999998864 5554
|
|
| >KOG0023|consensus | Back alignment and domain information |
|---|
Probab=88.32 E-value=1.6 Score=43.71 Aligned_cols=100 Identities=16% Similarity=0.227 Sum_probs=62.6
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
.|+.|.|+|+.| +|..=++.-.+-|. +|++++++.+.+ ++-+ ++|- .+.+ .|.+
T Consensus 181 pG~~vgI~GlGG-LGh~aVq~AKAMG~---rV~vis~~~~kk--eea~---------~~LG----------Ad~f-v~~~ 234 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHMAVQYAKAMGM---RVTVISTSSKKK--EEAI---------KSLG----------ADVF-VDST 234 (360)
T ss_pred CCcEEEEecCcc-cchHHHHHHHHhCc---EEEEEeCCchhH--HHHH---------HhcC----------ccee-EEec
Confidence 589999999999 99888877777886 899999986432 2222 1111 1112 2334
Q ss_pred -CCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecC
Q psy7538 109 -QLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTA 175 (543)
Q Consensus 109 -~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~ 175 (543)
+++ ..+.+.+-.|.++|++... ...++ .-++++++.. ..+|.++-.
T Consensus 235 ~d~d------~~~~~~~~~dg~~~~v~~~-a~~~~-----------~~~~~~lk~~---Gt~V~vg~p 281 (360)
T KOG0023|consen 235 EDPD------IMKAIMKTTDGGIDTVSNL-AEHAL-----------EPLLGLLKVN---GTLVLVGLP 281 (360)
T ss_pred CCHH------HHHHHHHhhcCcceeeeec-cccch-----------HHHHHHhhcC---CEEEEEeCc
Confidence 444 5666666678888887644 12222 2245666655 377888754
|
|
| >PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed | Back alignment and domain information |
|---|
Probab=88.29 E-value=1.3 Score=46.24 Aligned_cols=67 Identities=27% Similarity=0.386 Sum_probs=47.7
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+++|+|.|| |.+|+.++....+.|+ +|++++..+... ..++ .+ ..+.+|..|
T Consensus 2 ~~~igilG~-Gql~~ml~~aa~~lG~---~v~~~d~~~~~p--a~~~--------------------ad--~~~~~~~~D 53 (372)
T PRK06019 2 MKTIGIIGG-GQLGRMLALAAAPLGY---KVIVLDPDPDSP--AAQV--------------------AD--EVIVADYDD 53 (372)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCC---EEEEEeCCCCCc--hhHh--------------------Cc--eEEecCCCC
Confidence 478999996 8999999999999986 788887654321 1111 11 245567766
Q ss_pred CCCCCCHHHHHHHhcCccEEE
Q psy7538 110 LKLGISEIDKKELIDNVDIVY 130 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~Vi 130 (543)
++ .+..+++.+|+|.
T Consensus 54 ~~------~l~~~a~~~dvit 68 (372)
T PRK06019 54 VA------ALRELAEQCDVIT 68 (372)
T ss_pred HH------HHHHHHhcCCEEE
Confidence 54 7888888899874
|
|
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=88.18 E-value=0.77 Score=46.45 Aligned_cols=38 Identities=16% Similarity=0.319 Sum_probs=32.2
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
.-.+.+|+|+||+|.+|..+++.+...|. +|+++.|+.
T Consensus 160 ~~~~~~vlI~ga~g~vG~~~~~~a~~~g~---~v~~~~~~~ 197 (332)
T cd08259 160 VKKGDTVLVTGAGGGVGIHAIQLAKALGA---RVIAVTRSP 197 (332)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCC---eEEEEeCCH
Confidence 34578999999999999999999998875 678887754
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=88.17 E-value=0.53 Score=47.54 Aligned_cols=35 Identities=17% Similarity=0.251 Sum_probs=30.6
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
.+++|+|.|. |-+|+.++..|.+.|. +|++..|+.
T Consensus 151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga---~V~v~~r~~ 185 (296)
T PRK08306 151 HGSNVLVLGF-GRTGMTLARTLKALGA---NVTVGARKS 185 (296)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCC---EEEEEECCH
Confidence 5899999995 8899999999999875 788888874
|
|
| >KOG1198|consensus | Back alignment and domain information |
|---|
Probab=88.17 E-value=1.6 Score=45.13 Aligned_cols=40 Identities=23% Similarity=0.246 Sum_probs=28.8
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCC
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKG 69 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~ 69 (543)
.-+|+.|||.||+|-+|+..++-....+ + ..++..+++++
T Consensus 155 ~~~g~~vLv~ggsggVG~~aiQlAk~~~--~-~~v~t~~s~e~ 194 (347)
T KOG1198|consen 155 LSKGKSVLVLGGSGGVGTAAIQLAKHAG--A-IKVVTACSKEK 194 (347)
T ss_pred cCCCCeEEEEeCCcHHHHHHHHHHHhcC--C-cEEEEEcccch
Confidence 3468899999999999999987666654 3 34455555543
|
|
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=88.11 E-value=2 Score=43.21 Aligned_cols=38 Identities=21% Similarity=0.214 Sum_probs=31.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKK 68 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~ 68 (543)
.++++++|.|| |-.+++++..|...| +++|++..|...
T Consensus 122 ~~~k~vlvlGa-GGaarAi~~~l~~~g--~~~i~i~nRt~~ 159 (288)
T PRK12749 122 IKGKTMVLLGA-GGASTAIGAQGAIEG--LKEIKLFNRRDE 159 (288)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCC--CCEEEEEeCCcc
Confidence 46789999996 656999999998875 469999999854
|
|
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=88.08 E-value=4.1 Score=38.70 Aligned_cols=69 Identities=12% Similarity=0.185 Sum_probs=47.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++|++|+|.|| |-+|..-++.|++.|. +|+++..... ..++++. ...++.++.++.
T Consensus 7 l~gk~vlVvGg-G~va~rk~~~Ll~~ga---~VtVvsp~~~-----~~l~~l~---------------~~~~i~~~~~~~ 62 (205)
T TIGR01470 7 LEGRAVLVVGG-GDVALRKARLLLKAGA---QLRVIAEELE-----SELTLLA---------------EQGGITWLARCF 62 (205)
T ss_pred cCCCeEEEECc-CHHHHHHHHHHHHCCC---EEEEEcCCCC-----HHHHHHH---------------HcCCEEEEeCCC
Confidence 57899999995 9999999999999986 6666654321 2222221 113788888876
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEE
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYH 131 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH 131 (543)
... .+++++.||-
T Consensus 63 ~~~-----------dl~~~~lVi~ 75 (205)
T TIGR01470 63 DAD-----------ILEGAFLVIA 75 (205)
T ss_pred CHH-----------HhCCcEEEEE
Confidence 632 2467888873
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=88.03 E-value=1.5 Score=43.80 Aligned_cols=33 Identities=24% Similarity=0.370 Sum_probs=28.6
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEE
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLL 63 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l 63 (543)
++||+|.|.|.+|.+|+-++..|++.|. .|++.
T Consensus 156 l~Gk~v~vIG~S~ivG~Pla~lL~~~ga---tVtv~ 188 (284)
T PRK14179 156 LEGKHAVVIGRSNIVGKPMAQLLLDKNA---TVTLT 188 (284)
T ss_pred CCCCEEEEECCCCcCcHHHHHHHHHCCC---EEEEE
Confidence 3799999999999999999999999986 45443
|
|
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=87.75 E-value=2.1 Score=42.98 Aligned_cols=37 Identities=16% Similarity=0.248 Sum_probs=31.5
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
.++++|+|.|+ |-.|++++..|.+.| +++|+++.|..
T Consensus 125 ~~~k~vlIlGa-GGaaraia~aL~~~G--~~~I~I~nR~~ 161 (284)
T PRK12549 125 ASLERVVQLGA-GGAGAAVAHALLTLG--VERLTIFDVDP 161 (284)
T ss_pred ccCCEEEEECC-cHHHHHHHHHHHHcC--CCEEEEECCCH
Confidence 35789999995 779999999999886 46899999975
|
|
| >cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=87.67 E-value=2.4 Score=37.64 Aligned_cols=33 Identities=24% Similarity=0.402 Sum_probs=28.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEE
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLL 63 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l 63 (543)
++||+|.|.|.++-+|+.|+..|.++|. .|...
T Consensus 26 ~~gk~v~VvGrs~~vG~pla~lL~~~ga---tV~~~ 58 (140)
T cd05212 26 LDGKKVLVVGRSGIVGAPLQCLLQRDGA---TVYSC 58 (140)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEe
Confidence 5799999999999999999999998865 55544
|
NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional |
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=87.55 E-value=5.4 Score=40.58 Aligned_cols=36 Identities=19% Similarity=0.273 Sum_probs=30.7
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
..|++|.|.| .|-||+.+++.|..-|. +|++..|..
T Consensus 134 l~g~tvgIvG-~G~IG~~vA~~l~afG~---~V~~~~~~~ 169 (312)
T PRK15469 134 REDFTIGILG-AGVLGSKVAQSLQTWGF---PLRCWSRSR 169 (312)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHCCC---EEEEEeCCC
Confidence 4689999999 89999999999998875 777777754
|
|
| >cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2 | Back alignment and domain information |
|---|
Probab=87.34 E-value=5.5 Score=40.40 Aligned_cols=116 Identities=13% Similarity=0.174 Sum_probs=68.4
Q ss_pred EEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHH-----HHHh---cCchhHHHHhhcCcCCCCceEEE
Q psy7538 32 SIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRV-----EELF---ESPVFDALKTLRGKSILQKIQVI 103 (543)
Q Consensus 32 ~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl-----~~~~---~~~~f~~l~~~~~~~~~~~v~~i 103 (543)
+|+|.|+ |-+|..+++.|...|. ++|.+++...-..+-..|- +++- .....+++++.+ |. -++..+
T Consensus 1 kVlIVGa-GGlG~EiaKnLal~Gv--g~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lN-p~--v~V~~~ 74 (312)
T cd01489 1 KVLVVGA-GGIGCELLKNLVLTGF--GEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFN-PN--VKIVAY 74 (312)
T ss_pred CEEEECC-CHHHHHHHHHHHHhcC--CeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHC-CC--CeEEEE
Confidence 5899995 8899999999999864 6888877653221110000 0000 011233444433 32 357777
Q ss_pred EccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecC
Q psy7538 104 SGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTA 175 (543)
Q Consensus 104 ~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~ 175 (543)
.+++++.. .....+++.|+|+.+... .+ .-..+-+.|++. + ..||...|.
T Consensus 75 ~~~i~~~~------~~~~f~~~~DvVv~a~Dn------~~--------ar~~in~~c~~~-~-ip~I~~gt~ 124 (312)
T cd01489 75 HANIKDPD------FNVEFFKQFDLVFNALDN------LA--------ARRHVNKMCLAA-D-VPLIESGTT 124 (312)
T ss_pred eccCCCcc------chHHHHhcCCEEEECCCC------HH--------HHHHHHHHHHHC-C-CCEEEEecC
Confidence 77777643 234567899999977532 11 123455777776 4 567777765
|
UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=87.31 E-value=2 Score=42.88 Aligned_cols=33 Identities=12% Similarity=0.156 Sum_probs=28.0
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEE
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLL 63 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l 63 (543)
+.||+|+|.|.+..+|+-|...|++.+. .|++.
T Consensus 157 l~Gk~vvViGrs~iVG~Pla~lL~~~~a---tVtv~ 189 (285)
T PRK10792 157 TYGLNAVVVGASNIVGRPMSLELLLAGC---TVTVC 189 (285)
T ss_pred CCCCEEEEECCCcccHHHHHHHHHHCCC---eEEEE
Confidence 4599999999999999999999998864 55554
|
|
| >PRK13304 L-aspartate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=87.23 E-value=2.6 Score=41.80 Aligned_cols=35 Identities=20% Similarity=0.224 Sum_probs=25.8
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRT 66 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~ 66 (543)
++|.|.| .|.+|+.+++.|.+.++++.-+.+..|.
T Consensus 2 mrIgIIG-~G~iG~~ia~~l~~~~~~~elv~v~d~~ 36 (265)
T PRK13304 2 LKIGIVG-CGAIASLITKAILSGRINAELYAFYDRN 36 (265)
T ss_pred CEEEEEC-ccHHHHHHHHHHHcCCCCeEEEEEECCC
Confidence 6899999 6999999999998764344334445554
|
|
| >TIGR00036 dapB dihydrodipicolinate reductase | Back alignment and domain information |
|---|
Probab=87.15 E-value=2.2 Score=42.40 Aligned_cols=36 Identities=19% Similarity=0.351 Sum_probs=27.9
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
++|.|.|++|-+|+.+++.+.+. +++.-|.+.+|+.
T Consensus 2 ikV~IiGa~G~MG~~i~~~i~~~-~~~elvav~d~~~ 37 (266)
T TIGR00036 2 IKVAVAGAAGRMGRELIKAALAA-EGLQLVAAFERHG 37 (266)
T ss_pred eEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecCC
Confidence 58999999999999999999876 6664444455443
|
|
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=87.03 E-value=2 Score=42.99 Aligned_cols=37 Identities=14% Similarity=0.147 Sum_probs=31.7
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
.++++|+|.|+ |-.|+.++..|.+.|. ++|+++.|+.
T Consensus 123 ~~~k~vlvlGa-GGaarai~~aL~~~G~--~~i~I~nRt~ 159 (282)
T TIGR01809 123 LAGFRGLVIGA-GGTSRAAVYALASLGV--TDITVINRNP 159 (282)
T ss_pred cCCceEEEEcC-cHHHHHHHHHHHHcCC--CeEEEEeCCH
Confidence 46899999995 8899999999998864 6899999974
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=86.95 E-value=11 Score=40.23 Aligned_cols=37 Identities=19% Similarity=0.235 Sum_probs=28.4
Q ss_pred hcCCCEEE----EEcCcchhHHHHHHHHHhhCCCcCEEEEEecC
Q psy7538 27 TYENKSIF----LSGGSGFLGKVLIEKILRLEPNVKKIYLLMRT 66 (543)
Q Consensus 27 ~~~~~~Vl----ITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~ 66 (543)
+-.|..++ |+||+|-+|..+++.|...|. +|+...+.
T Consensus 31 ~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~---~v~~~~~~ 71 (450)
T PRK08261 31 YRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY---DVVANNDG 71 (450)
T ss_pred CCCCCCCCCCceEEccCchhHHHHHHHHhhCCC---eeeecCcc
Confidence 33455666 889999999999999999886 66665544
|
|
| >TIGR01408 Ube1 ubiquitin-activating enzyme E1 | Back alignment and domain information |
|---|
Probab=86.84 E-value=4.1 Score=48.01 Aligned_cols=117 Identities=16% Similarity=0.181 Sum_probs=69.0
Q ss_pred hhhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCH-------------HHHHHHHhcCchhHHHH
Q psy7538 23 RIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTP-------------NQRVEELFESPVFDALK 89 (543)
Q Consensus 23 ~i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~-------------~~rl~~~~~~~~f~~l~ 89 (543)
+-++-++..+|||.|+ |-+|..+++.|...| |+.|.+.+-..-..+- ..|.+ ...++|+
T Consensus 17 eaq~kL~~s~VLIiG~-gGLG~EiaKnL~laG--Vg~iti~D~d~v~~sdL~rQf~~~~~dIGk~Kae-----a~~~~L~ 88 (1008)
T TIGR01408 17 EAMQKMAKSNVLISGM-GGLGLEIAKNLVLAG--VKSVTLHDTEKCQAWDLSSNFFLSEDDVGRNRAE-----AVVKKLA 88 (1008)
T ss_pred HHHHHHhhCcEEEECC-CHHHHHHHHHHHHcC--CCeEEEEeCCeecHhhCCCceecchHHcCchHHH-----HHHHHHH
Confidence 3345677789999997 459999999999986 4688877754311100 01111 1233444
Q ss_pred hhcCcCCCCceEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceE
Q psy7538 90 TLRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCF 169 (543)
Q Consensus 90 ~~~~~~~~~~v~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~ 169 (543)
+.+ |. -++..+.++++ ...+++.|+|+-+- .++...+ .+-++|++.+....|
T Consensus 89 eLN-p~--V~V~~~~~~l~-----------~e~l~~fdvVV~t~------~~~~~~~--------~in~~cr~~~~~I~f 140 (1008)
T TIGR01408 89 ELN-PY--VHVSSSSVPFN-----------EEFLDKFQCVVLTE------MSLPLQK--------EINDFCHSQCPPIAF 140 (1008)
T ss_pred HHC-CC--ceEEEecccCC-----------HHHHcCCCEEEECC------CCHHHHH--------HHHHHHHHcCCCeEE
Confidence 444 32 24555554443 23678999999753 2333333 355789887322368
Q ss_pred EEEecC
Q psy7538 170 TYISTA 175 (543)
Q Consensus 170 V~vST~ 175 (543)
|+.++.
T Consensus 141 I~~~~~ 146 (1008)
T TIGR01408 141 ISADVR 146 (1008)
T ss_pred EEEeec
Confidence 887765
|
This model represents the full length, over a thousand amino acids, of a multicopy family of eukaryotic proteins, many of which are designated ubiquitin-activating enzyme E1. Members have two copies of the ThiF family domain (pfam00899), a repeat found in ubiquitin-activating proteins (pfam02134), and other regions. |
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=86.67 E-value=0.9 Score=46.54 Aligned_cols=35 Identities=14% Similarity=0.318 Sum_probs=27.3
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRT 66 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~ 66 (543)
|.+|||+||||-+|+..++-+...|. ..|....++
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G~--~~v~~~~s~ 177 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALGA--TVVAVVSSS 177 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCC--cEEEEecCH
Confidence 78999999999999999988888874 244444443
|
|
| >PF12683 DUF3798: Protein of unknown function (DUF3798); InterPro: IPR024258 This entry represents functionally uncharacterised proteins that are found in bacteria | Back alignment and domain information |
|---|
Probab=86.49 E-value=3.6 Score=40.31 Aligned_cols=64 Identities=23% Similarity=0.305 Sum_probs=41.7
Q ss_pred chhHHHHhhcCcCCCCceEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHh
Q psy7538 83 PVFDALKTLRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQ 162 (543)
Q Consensus 83 ~~f~~l~~~~~~~~~~~v~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~ 162 (543)
+.|+++|+.+ +.+..+.|+..+ |...+.+.+|++++.- ++..-..+..+|++
T Consensus 77 ~af~kIkekR-----pDIl~ia~~~~E--------Dp~~i~~~aDi~~~~D---------------~~~~G~~i~~~Ak~ 128 (275)
T PF12683_consen 77 EAFRKIKEKR-----PDILLIAGEPHE--------DPEVISSAADIVVNPD---------------EISRGYTIVWAAKK 128 (275)
T ss_dssp HHHHHHHHH------TTSEEEESS--S---------HHHHHHHSSEEEE-----------------HHHHHHHHHHHHHH
T ss_pred HHHHHHHhcC-----CCeEEEcCCCcC--------CHHHHhhccCeEeccc---------------hhhccHHHHHHHHH
Confidence 4577787776 457788887765 4556666789998732 22334568899999
Q ss_pred ccCCceEEEEecC
Q psy7538 163 MKNLKCFTYISTA 175 (543)
Q Consensus 163 ~~~l~~~V~vST~ 175 (543)
+ |.+.|||+|..
T Consensus 129 m-GAktFVh~sfp 140 (275)
T PF12683_consen 129 M-GAKTFVHYSFP 140 (275)
T ss_dssp T-T-S-EEEEEET
T ss_pred c-CCceEEEEech
Confidence 9 99999999974
|
They are typically between 247 and 417 amino acids in length. Most of the proteins in this entry have an N-terminal lipoprotein attachment site. These proteins have distant similarity to periplasmic ligand binding families suggesting that this family has a similar role.; PDB: 3QI7_A. |
| >PF08732 HIM1: HIM1; InterPro: IPR014843 HIM1 (high induction of mutagenesis protein 1) plays a role in the control of spontaneous and induced mutagenesis [] | Back alignment and domain information |
|---|
Probab=86.26 E-value=1.4 Score=45.26 Aligned_cols=98 Identities=12% Similarity=0.053 Sum_probs=62.1
Q ss_pred hcCccEEEEcCccCCCcccH--HHHHHHHHHHHHHHHHHHH----hccCCceEEEEecCccccCCCcccccccCCCCChH
Q psy7538 123 IDNVDIVYHVAATIRFDEPI--KTAVILNTRGTRDMLELSK----QMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPH 196 (543)
Q Consensus 123 ~~~vd~ViH~AA~v~~~~~~--~~~~~~Nv~gt~~ll~~a~----~~~~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~ 196 (543)
+.++..+|.+-|+.+....- .....+...-+..|++... +. +.+++|.++|........
T Consensus 201 l~~i~t~is~LGsts~~a~~s~~~~~~IDy~Lnl~laq~f~~~~~~~-~~K~~vIvTSfn~~~~s~-------------- 265 (410)
T PF08732_consen 201 LDDIKTMISTLGSTSAQAKSSKAARHKIDYQLNLDLAQTFANDIKNT-GNKKLVIVTSFNNNAISS-------------- 265 (410)
T ss_pred hhhhhhheecCCCChhhccccccchhhccccccHHHHHHhhhhhccC-CCceEEEEEecCcchhhh--------------
Confidence 34667777777766532211 1111233333344555544 44 678999999874432110
Q ss_pred HHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhc-CCcEEEEecCeeeecCCC
Q psy7538 197 QVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMEL-GMPCMILRPSIVVPIYKE 260 (543)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~-~lp~~IlRps~V~G~~~~ 260 (543)
..+|-.+|..-|+-+...-.. =-.++|+|||-+.|...+
T Consensus 266 -------------------------~f~Yfk~K~~LE~dl~~~l~~~l~~lvILRPGplvG~h~~ 305 (410)
T PF08732_consen 266 -------------------------MFPYFKTKGELENDLQNLLPPKLKHLVILRPGPLVGEHGS 305 (410)
T ss_pred -------------------------hhhhhHHHHHHHHHHHhhcccccceEEEecCccccCCCCC
Confidence 158999999999998877551 136899999999998876
|
It is thought to participate in the control of processing of mutational intermediates appearing during error-prone bypass of DNA damage. |
| >PRK07634 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=86.24 E-value=2.8 Score=40.74 Aligned_cols=37 Identities=16% Similarity=0.417 Sum_probs=29.6
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhC-CCcCEEEEEecC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLE-PNVKKIYLLMRT 66 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g-~~v~~V~~l~R~ 66 (543)
++++|.|.| +|.+|+.++..|++.+ .++..|++..|+
T Consensus 3 ~~~kI~iIG-~G~mg~ala~~l~~~~~~~~~~i~~~~~~ 40 (245)
T PRK07634 3 KKHRILFIG-AGRMAEAIFSGLLKTSKEYIEEIIVSNRS 40 (245)
T ss_pred CCCeEEEEC-cCHHHHHHHHHHHhCCCCCcCeEEEECCC
Confidence 467899999 6999999999999886 345457777765
|
|
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=86.22 E-value=2.7 Score=38.85 Aligned_cols=37 Identities=16% Similarity=0.309 Sum_probs=32.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKK 68 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~ 68 (543)
..|++|.|.| .|-||+.+++.|..-|. +|+...|..+
T Consensus 34 l~g~tvgIiG-~G~IG~~vA~~l~~fG~---~V~~~d~~~~ 70 (178)
T PF02826_consen 34 LRGKTVGIIG-YGRIGRAVARRLKAFGM---RVIGYDRSPK 70 (178)
T ss_dssp STTSEEEEES-TSHHHHHHHHHHHHTT----EEEEEESSCH
T ss_pred cCCCEEEEEE-EcCCcCeEeeeeecCCc---eeEEecccCC
Confidence 5689999999 79999999999998875 8999999864
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=86.12 E-value=14 Score=39.91 Aligned_cols=36 Identities=14% Similarity=0.324 Sum_probs=30.0
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
+++++|+|.|+ |.+|..+++.|.+.|. +|.+..+.+
T Consensus 14 ~~~~~v~viG~-G~~G~~~A~~L~~~G~---~V~~~d~~~ 49 (480)
T PRK01438 14 WQGLRVVVAGL-GVSGFAAADALLELGA---RVTVVDDGD 49 (480)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCC---EEEEEeCCc
Confidence 57889999995 8999999999999886 677777554
|
|
| >PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=86.08 E-value=2.3 Score=42.72 Aligned_cols=35 Identities=17% Similarity=0.240 Sum_probs=30.0
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKG 69 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~ 69 (543)
++|.|.|+ |.+|..++..|++.|+ +|.+..+++..
T Consensus 6 ~~V~ViGa-G~mG~~iA~~~a~~G~---~V~l~d~~~~~ 40 (286)
T PRK07819 6 QRVGVVGA-GQMGAGIAEVCARAGV---DVLVFETTEEL 40 (286)
T ss_pred cEEEEEcc-cHHHHHHHHHHHhCCC---EEEEEECCHHH
Confidence 47999995 9999999999999987 78888887643
|
|
| >PRK08057 cobalt-precorrin-6x reductase; Reviewed | Back alignment and domain information |
|---|
Probab=86.01 E-value=8.8 Score=37.60 Aligned_cols=94 Identities=14% Similarity=0.188 Sum_probs=61.0
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
.++|+|.|||+= |+.|++.|.+.|. .|++-+-...+.. . ...+....|-+.+
T Consensus 2 ~~~IlvlgGT~e-gr~la~~L~~~g~---~v~~Svat~~g~~----------------------~--~~~~~v~~G~l~~ 53 (248)
T PRK08057 2 MPRILLLGGTSE-ARALARALAAAGV---DIVLSLAGRTGGP----------------------A--DLPGPVRVGGFGG 53 (248)
T ss_pred CceEEEEechHH-HHHHHHHHHhCCC---eEEEEEccCCCCc----------------------c--cCCceEEECCCCC
Confidence 468999999985 9999999998875 4444444332210 1 1245666676643
Q ss_pred CCCCCCHHHHHHHhc--CccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEE
Q psy7538 110 LKLGISEIDKKELID--NVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFT 170 (543)
Q Consensus 110 ~~lgls~~~~~~l~~--~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V 170 (543)
. +++...+. ++++||...- ++.. .-++++.++|++. +++.+=
T Consensus 54 ~------~~l~~~l~~~~i~~VIDATH------PfA~------~is~~a~~ac~~~-~ipyiR 97 (248)
T PRK08057 54 A------EGLAAYLREEGIDLVIDATH------PYAA------QISANAAAACRAL-GIPYLR 97 (248)
T ss_pred H------HHHHHHHHHCCCCEEEECCC------ccHH------HHHHHHHHHHHHh-CCcEEE
Confidence 3 47888776 6999997532 2221 2357788999998 665443
|
|
| >PRK06719 precorrin-2 dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=85.83 E-value=2.4 Score=38.42 Aligned_cols=32 Identities=16% Similarity=0.237 Sum_probs=27.5
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEE
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLL 63 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l 63 (543)
.+|++|+|.|| |-+|...++.|++.|+ +|.++
T Consensus 11 l~~~~vlVvGG-G~va~rka~~Ll~~ga---~V~VI 42 (157)
T PRK06719 11 LHNKVVVIIGG-GKIAYRKASGLKDTGA---FVTVV 42 (157)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCC---EEEEE
Confidence 47899999995 9999999999999987 55555
|
|
| >PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=85.62 E-value=13 Score=39.62 Aligned_cols=87 Identities=15% Similarity=0.204 Sum_probs=53.9
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+.+++|+|+|+ |-.|..+++.|.+.|. +|.+..+.+... ..+++++ ...++.+..|..
T Consensus 3 ~~~~~~~v~G~-g~~G~~~a~~l~~~g~---~v~~~d~~~~~~-~~~~l~~-----------------~~~gi~~~~g~~ 60 (445)
T PRK04308 3 FQNKKILVAGL-GGTGISMIAYLRKNGA---EVAAYDAELKPE-RVAQIGK-----------------MFDGLVFYTGRL 60 (445)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCC---EEEEEeCCCCch-hHHHHhh-----------------ccCCcEEEeCCC
Confidence 46899999997 5699999999999986 666666544321 0112211 112555655542
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHH
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVI 147 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~ 147 (543)
.+ ....+.|.||...|.......+..+.+
T Consensus 61 ~~-----------~~~~~~d~vv~spgi~~~~p~~~~a~~ 89 (445)
T PRK04308 61 KD-----------ALDNGFDILALSPGISERQPDIEAFKQ 89 (445)
T ss_pred CH-----------HHHhCCCEEEECCCCCCCCHHHHHHHH
Confidence 21 233678999999987654444444444
|
|
| >PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=85.58 E-value=2.6 Score=42.00 Aligned_cols=28 Identities=25% Similarity=0.393 Sum_probs=25.5
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEP 55 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~ 55 (543)
+.||+|+|.|.+..+|+-|+..|++++.
T Consensus 162 l~Gk~vvViGrs~iVGkPla~lL~~~~a 189 (287)
T PRK14176 162 IEGKNAVIVGHSNVVGKPMAAMLLNRNA 189 (287)
T ss_pred CCCCEEEEECCCcccHHHHHHHHHHCCC
Confidence 3699999999999999999999998864
|
|
| >TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain | Back alignment and domain information |
|---|
Probab=85.37 E-value=44 Score=35.81 Aligned_cols=96 Identities=18% Similarity=0.245 Sum_probs=63.2
Q ss_pred hhcCCCEEEEEcCc---chhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEE
Q psy7538 26 KTYENKSIFLSGGS---GFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQV 102 (543)
Q Consensus 26 ~~~~~~~VlITGat---GFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~ 102 (543)
.+++.++|.|.|+| |-+|..+++.|++.|+.- +||.+...... ...+..
T Consensus 3 ~l~~p~siavvGaS~~~~~~g~~~~~~l~~~gf~g-~v~~Vnp~~~~---------------------------i~G~~~ 54 (447)
T TIGR02717 3 HLFNPKSVAVIGASRDPGKVGYAIMKNLIEGGYKG-KIYPVNPKAGE---------------------------ILGVKA 54 (447)
T ss_pred cccCCCEEEEEccCCCCCchHHHHHHHHHhCCCCC-cEEEECCCCCc---------------------------cCCccc
Confidence 57889999999998 778999999999987642 67755432210 011111
Q ss_pred EEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccc
Q psy7538 103 ISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCH 178 (543)
Q Consensus 103 i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~ 178 (543)
-+ +++.+-+.+|.++-+... ..+..+++.|.+. +++.+|.+|+.+..
T Consensus 55 ------~~-------sl~~lp~~~Dlavi~vp~---------------~~~~~~l~e~~~~-gv~~~vi~s~gf~e 101 (447)
T TIGR02717 55 ------YP-------SVLEIPDPVDLAVIVVPA---------------KYVPQVVEECGEK-GVKGAVVITAGFKE 101 (447)
T ss_pred ------cC-------CHHHCCCCCCEEEEecCH---------------HHHHHHHHHHHhc-CCCEEEEECCCccc
Confidence 11 345555678887755331 1234577788886 89999999887664
|
Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff. |
| >PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot | Back alignment and domain information |
|---|
Probab=85.31 E-value=3.6 Score=34.87 Aligned_cols=34 Identities=18% Similarity=0.400 Sum_probs=26.4
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRT 66 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~ 66 (543)
++|.|.|+ |.+|+...+.+.+.++++ +|..+..+
T Consensus 1 i~v~iiG~-G~~g~~~~~~~~~~~~~~-~v~~v~d~ 34 (120)
T PF01408_consen 1 IRVGIIGA-GSIGRRHLRALLRSSPDF-EVVAVCDP 34 (120)
T ss_dssp EEEEEEST-SHHHHHHHHHHHHTTTTE-EEEEEECS
T ss_pred CEEEEECC-cHHHHHHHHHHHhcCCCc-EEEEEEeC
Confidence 37899996 888999999999997777 55544443
|
GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A .... |
| >PLN02353 probable UDP-glucose 6-dehydrogenase | Back alignment and domain information |
|---|
Probab=85.14 E-value=5.8 Score=42.80 Aligned_cols=36 Identities=17% Similarity=0.280 Sum_probs=30.0
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
+|+|.|.| +|++|..+...|.+.|+++ +|++..+.+
T Consensus 1 ~m~I~ViG-~GyvGl~~A~~lA~~g~g~-~V~gvD~~~ 36 (473)
T PLN02353 1 MVKICCIG-AGYVGGPTMAVIALKCPDI-EVVVVDISV 36 (473)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhcCCCC-eEEEEECCH
Confidence 47899997 7999999999999987655 788887653
|
|
| >cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like | Back alignment and domain information |
|---|
Probab=85.09 E-value=9.7 Score=36.98 Aligned_cols=117 Identities=10% Similarity=0.083 Sum_probs=69.0
Q ss_pred EEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHH-----HHHhc---CchhHHHHhhcCcCCCCceEEE
Q psy7538 32 SIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRV-----EELFE---SPVFDALKTLRGKSILQKIQVI 103 (543)
Q Consensus 32 ~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl-----~~~~~---~~~f~~l~~~~~~~~~~~v~~i 103 (543)
+|+|.| .|-+|..+++.|.+.|. +++.+++...-..+-..|- +++=+ ...-+++++.+ |. -++..+
T Consensus 1 kVlvvG-~GGlG~eilk~La~~Gv--g~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~n-p~--v~i~~~ 74 (234)
T cd01484 1 KVLLVG-AGGIGCELLKNLALMGF--GQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRN-PN--CKVVPY 74 (234)
T ss_pred CEEEEC-CCHHHHHHHHHHHHcCC--CeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHC-CC--CEEEEE
Confidence 588999 57899999999999864 6888887764322211110 01000 11123444433 32 357777
Q ss_pred EccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecC
Q psy7538 104 SGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTA 175 (543)
Q Consensus 104 ~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~ 175 (543)
..++.+.. +.-...+++.|+|+.+... ...-..+-+.|.+. + ..+|+.+|.
T Consensus 75 ~~~i~~~~-----~~~~~f~~~~DvVi~a~Dn--------------~~aR~~ln~~c~~~-~-iplI~~g~~ 125 (234)
T cd01484 75 QNKVGPEQ-----DFNDTFFEQFHIIVNALDN--------------IIARRYVNGMLIFL-I-VPLIESGTE 125 (234)
T ss_pred eccCChhh-----hchHHHHhCCCEEEECCCC--------------HHHHHHHHHHHHHc-C-CCEEEEccc
Confidence 77775432 0124567899999987432 12224466778876 4 567887775
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou |
| >PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=84.96 E-value=2.9 Score=41.67 Aligned_cols=33 Identities=18% Similarity=0.254 Sum_probs=27.9
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEE
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLL 63 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l 63 (543)
++||+|.|.|.+..+|+-|+..|++++. .|.+.
T Consensus 156 l~Gk~vvViGrS~~VGkPla~lL~~~~A---TVt~c 188 (282)
T PRK14180 156 TEGAYAVVVGASNVVGKPVSQLLLNAKA---TVTTC 188 (282)
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHCCC---EEEEE
Confidence 4599999999999999999999998864 55443
|
|
| >PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=84.93 E-value=2.8 Score=41.87 Aligned_cols=33 Identities=27% Similarity=0.442 Sum_probs=27.8
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEE
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLL 63 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l 63 (543)
++||+|.|.|.|..+|+-|...|++++. .|++.
T Consensus 153 l~Gk~vvViGrS~iVGkPla~lL~~~~a---TVtic 185 (287)
T PRK14173 153 LAGKEVVVVGRSNIVGKPLAALLLREDA---TVTLA 185 (287)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCC---EEEEe
Confidence 3699999999999999999999998864 55543
|
|
| >PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=84.82 E-value=3.2 Score=41.41 Aligned_cols=28 Identities=25% Similarity=0.400 Sum_probs=25.6
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEP 55 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~ 55 (543)
++||+|+|.|.+..+|+-++..|+++|.
T Consensus 155 l~Gk~vvVvGrs~~VG~Pla~lL~~~gA 182 (285)
T PRK14191 155 IKGKDVVIIGASNIVGKPLAMLMLNAGA 182 (285)
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCC
Confidence 3599999999999999999999998875
|
|
| >TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p | Back alignment and domain information |
|---|
Probab=84.47 E-value=7.6 Score=43.08 Aligned_cols=39 Identities=23% Similarity=0.390 Sum_probs=32.2
Q ss_pred hhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 26 KTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 26 ~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
+-.++.+|+|.|+ |-+|..+++.|.+.| |++|.+++...
T Consensus 334 ekL~~~kVLIvGa-GGLGs~VA~~La~~G--Vg~ItlVD~D~ 372 (664)
T TIGR01381 334 ERYSQLKVLLLGA-GTLGCNVARCLIGWG--VRHITFVDNGK 372 (664)
T ss_pred HHHhcCeEEEECC-cHHHHHHHHHHHHcC--CCeEEEEcCCE
Confidence 5577899999995 779999999999985 57888887653
|
This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy. |
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=84.44 E-value=8 Score=39.47 Aligned_cols=33 Identities=18% Similarity=0.219 Sum_probs=28.9
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
++|.|.| +|-+|..++..++..|+ +|.+..+.+
T Consensus 8 ~~VaVIG-aG~MG~giA~~~a~aG~---~V~l~D~~~ 40 (321)
T PRK07066 8 KTFAAIG-SGVIGSGWVARALAHGL---DVVAWDPAP 40 (321)
T ss_pred CEEEEEC-cCHHHHHHHHHHHhCCC---eEEEEeCCH
Confidence 6899999 59999999999999997 778888765
|
|
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=84.44 E-value=0.17 Score=44.21 Aligned_cols=28 Identities=25% Similarity=0.334 Sum_probs=22.8
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCc
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNV 57 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v 57 (543)
..++|-|.|+ |-+|.+|...|.+.|+.|
T Consensus 9 ~~l~I~iIGa-GrVG~~La~aL~~ag~~v 36 (127)
T PF10727_consen 9 ARLKIGIIGA-GRVGTALARALARAGHEV 36 (127)
T ss_dssp ---EEEEECT-SCCCCHHHHHHHHTTSEE
T ss_pred CccEEEEECC-CHHHHHHHHHHHHCCCeE
Confidence 4579999996 999999999999999844
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=84.38 E-value=3 Score=41.51 Aligned_cols=33 Identities=21% Similarity=0.307 Sum_probs=27.8
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEE
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLL 63 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l 63 (543)
+.||+|.|.|.+..+|+-|..-|++++. .|++.
T Consensus 157 l~Gk~vvViGrS~iVGkPla~lL~~~~a---tVt~c 189 (284)
T PRK14177 157 VTGKNAVVVGRSPILGKPMAMLLTEMNA---TVTLC 189 (284)
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHCCC---EEEEe
Confidence 4699999999999999999999998864 55543
|
|
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=84.34 E-value=0.78 Score=46.65 Aligned_cols=37 Identities=22% Similarity=0.370 Sum_probs=31.0
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
..+++|+|.|+ |-+|..+++.|...| ..+|++..|+.
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g--~~~V~v~~r~~ 212 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKG--VAEITIANRTY 212 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcC--CCEEEEEeCCH
Confidence 47899999996 999999999998754 35899998874
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=84.14 E-value=3.2 Score=41.23 Aligned_cols=38 Identities=21% Similarity=0.394 Sum_probs=30.5
Q ss_pred hhhhhc----CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEE
Q psy7538 23 RIAKTY----ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLL 63 (543)
Q Consensus 23 ~i~~~~----~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l 63 (543)
.+.++| +||+|.|.|.+..+|+-|...|++++. .|++.
T Consensus 147 ~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~A---tVt~c 188 (278)
T PRK14172 147 TLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENA---TVTIC 188 (278)
T ss_pred HHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCC---EEEEe
Confidence 344555 799999999999999999999998864 55443
|
|
| >COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=83.93 E-value=36 Score=31.52 Aligned_cols=34 Identities=29% Similarity=0.447 Sum_probs=26.6
Q ss_pred CCCEEEEEcCcch----hHHHHHHHHHhhCCCcCEEEEEec
Q psy7538 29 ENKSIFLSGGSGF----LGKVLIEKILRLEPNVKKIYLLMR 65 (543)
Q Consensus 29 ~~~~VlITGatGF----iG~~Lv~~Ll~~g~~v~~V~~l~R 65 (543)
++.+|-.||=+|- |+.+|-++|.+.|. ++|+|+-
T Consensus 22 ~~~viW~TGLSGsGKSTiA~ale~~L~~~G~---~~y~LDG 59 (197)
T COG0529 22 KGAVIWFTGLSGSGKSTIANALEEKLFAKGY---HVYLLDG 59 (197)
T ss_pred CCeEEEeecCCCCCHHHHHHHHHHHHHHcCC---eEEEecC
Confidence 4568999998774 77788888888886 7888753
|
|
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=83.82 E-value=0.91 Score=48.32 Aligned_cols=37 Identities=22% Similarity=0.387 Sum_probs=31.5
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
..+++|+|.|+ |-+|..++..|...|. .+|++..|+.
T Consensus 180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~--~~V~v~~r~~ 216 (423)
T PRK00045 180 LSGKKVLVIGA-GEMGELVAKHLAEKGV--RKITVANRTL 216 (423)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHCCC--CeEEEEeCCH
Confidence 67899999995 9999999999988764 5788888864
|
|
| >cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively | Back alignment and domain information |
|---|
Probab=83.73 E-value=9 Score=38.54 Aligned_cols=96 Identities=22% Similarity=0.222 Sum_probs=53.7
Q ss_pred EEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHH--H---HH--H---hcCchhHHHHhhcCcCCCCceE
Q psy7538 32 SIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQR--V---EE--L---FESPVFDALKTLRGKSILQKIQ 101 (543)
Q Consensus 32 ~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~r--l---~~--~---~~~~~f~~l~~~~~~~~~~~v~ 101 (543)
+|+|.|+ |-+|..+++.|.+.| |.+|.+++...-..+...| + ++ + .-....++|++.+ |.. +++
T Consensus 1 kVLIvGa-GGLGs~vA~~La~aG--Vg~ItlvD~D~Ve~sNL~RQ~L~~~~D~~iGk~Ka~aaa~~L~~iN-P~v--~v~ 74 (307)
T cd01486 1 KCLLLGA-GTLGCNVARNLLGWG--VRHITFVDSGKVSYSNPVRQSLFTFEDCKGGKPKAEAAAERLKEIF-PSI--DAT 74 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHHcC--CCeEEEECCCEeccccCCcccccccchhhcCccHHHHHHHHHHHHC-CCc--EEE
Confidence 5899995 779999999999985 4678777654321111111 0 00 0 0011234444444 332 344
Q ss_pred EEEccCCC----------CCCCCCHHHHHHHhcCccEEEEcC
Q psy7538 102 VISGDITQ----------LKLGISEIDKKELIDNVDIVYHVA 133 (543)
Q Consensus 102 ~i~gDl~~----------~~lgls~~~~~~l~~~vd~ViH~A 133 (543)
.+...+.- +..-.+.+.+.+++++.|+||-+.
T Consensus 75 ~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~d~t 116 (307)
T cd01486 75 GIVLSIPMPGHPISESEVPSTLKDVKRLEELIKDHDVIFLLT 116 (307)
T ss_pred EeeeeccccccccccccccccccCHHHHHHHHhhCCEEEECC
Confidence 44433310 112234567889999999999886
|
This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole. |
| >PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt | Back alignment and domain information |
|---|
Probab=83.71 E-value=7.2 Score=38.26 Aligned_cols=95 Identities=18% Similarity=0.311 Sum_probs=59.3
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|+|.|||+= |+.|++.|.+.|. + .+.+..--. +. + . ...........|-+.+.
T Consensus 1 m~ILvlgGTtE-~r~la~~L~~~g~-v-~~sv~t~~g-~~-----~------------~----~~~~~~~~v~~G~lg~~ 55 (249)
T PF02571_consen 1 MKILVLGGTTE-GRKLAERLAEAGY-V-IVSVATSYG-GE-----L------------L----KPELPGLEVRVGRLGDE 55 (249)
T ss_pred CEEEEEechHH-HHHHHHHHHhcCC-E-EEEEEhhhh-Hh-----h------------h----ccccCCceEEECCCCCH
Confidence 78999999985 8999999999975 3 222222111 10 0 0 11123556777776443
Q ss_pred CCCCCHHHHHHHhc--CccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceE
Q psy7538 111 KLGISEIDKKELID--NVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCF 169 (543)
Q Consensus 111 ~lgls~~~~~~l~~--~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~ 169 (543)
+++...++ +++.||...- ++.. .-++++.++|+++ ++..+
T Consensus 56 ------~~l~~~l~~~~i~~vIDATH------PfA~------~is~na~~a~~~~-~ipyl 97 (249)
T PF02571_consen 56 ------EGLAEFLRENGIDAVIDATH------PFAA------EISQNAIEACREL-GIPYL 97 (249)
T ss_pred ------HHHHHHHHhCCCcEEEECCC------chHH------HHHHHHHHHHhhc-CcceE
Confidence 37888775 6999997532 2222 2257788999998 66543
|
Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process |
| >PRK13302 putative L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=83.70 E-value=3.4 Score=41.11 Aligned_cols=37 Identities=19% Similarity=0.360 Sum_probs=26.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEE-EEecC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIY-LLMRT 66 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~-~l~R~ 66 (543)
++.++|.|.| .|.||+.+++.|.+..+++ +|. +..|.
T Consensus 4 m~~irIGIIG-~G~IG~~~a~~L~~~~~~~-el~aV~dr~ 41 (271)
T PRK13302 4 RPELRVAIAG-LGAIGKAIAQALDRGLPGL-TLSAVAVRD 41 (271)
T ss_pred CCeeEEEEEC-ccHHHHHHHHHHHhcCCCe-EEEEEECCC
Confidence 3457999999 6999999999998742344 444 44443
|
|
| >cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1 | Back alignment and domain information |
|---|
Probab=83.60 E-value=15 Score=36.87 Aligned_cols=121 Identities=15% Similarity=0.163 Sum_probs=70.9
Q ss_pred chhhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHH--------HHHHHHhcCchhHHHHhhcC
Q psy7538 22 DRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPN--------QRVEELFESPVFDALKTLRG 93 (543)
Q Consensus 22 ~~i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~--------~rl~~~~~~~~f~~l~~~~~ 93 (543)
.+-++-+++.+|||.|+ |-+|..+++.|...|. ++|.+.+...-..+-. +.+-+--.....++|++.+
T Consensus 11 ~eaq~kL~~s~VLIvG~-gGLG~EiaKnLalaGV--g~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLN- 86 (286)
T cd01491 11 HEAMKKLQKSNVLISGL-GGLGVEIAKNLILAGV--KSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELN- 86 (286)
T ss_pred HHHHHHHhcCcEEEEcC-CHHHHHHHHHHHHcCC--CeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHC-
Confidence 34455677899999996 6689999999999864 6787776543211100 0010000112334555555
Q ss_pred cCCCCceEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEe
Q psy7538 94 KSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIS 173 (543)
Q Consensus 94 ~~~~~~v~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vS 173 (543)
|. -++..+.++++ ...+++.|+|+-+.. ++.... .+-++|++. + ..||+..
T Consensus 87 p~--V~V~~~~~~~~-----------~~~l~~fdvVV~~~~------~~~~~~--------~in~~c~~~-~-ipfI~a~ 137 (286)
T cd01491 87 PY--VPVTVSTGPLT-----------TDELLKFQVVVLTDA------SLEDQL--------KINEFCHSP-G-IKFISAD 137 (286)
T ss_pred CC--CEEEEEeccCC-----------HHHHhcCCEEEEecC------CHHHHH--------HHHHHHHHc-C-CEEEEEe
Confidence 43 34566655422 134578999987753 223322 344788886 4 4788877
Q ss_pred cC
Q psy7538 174 TA 175 (543)
Q Consensus 174 T~ 175 (543)
+.
T Consensus 138 ~~ 139 (286)
T cd01491 138 TR 139 (286)
T ss_pred cc
Confidence 76
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1. |
| >PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=83.36 E-value=3.9 Score=40.84 Aligned_cols=38 Identities=21% Similarity=0.367 Sum_probs=30.5
Q ss_pred hhhhhc----CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEE
Q psy7538 23 RIAKTY----ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLL 63 (543)
Q Consensus 23 ~i~~~~----~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l 63 (543)
.+.++| +||+|.|.|.+..+|+-|...|++++. .|++.
T Consensus 147 ~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~a---tVt~c 188 (284)
T PRK14190 147 ELLKEYNIDISGKHVVVVGRSNIVGKPVGQLLLNENA---TVTYC 188 (284)
T ss_pred HHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCC---EEEEE
Confidence 344554 799999999999999999999998864 55543
|
|
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=83.33 E-value=3.6 Score=43.23 Aligned_cols=75 Identities=23% Similarity=0.352 Sum_probs=52.8
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++++|+|.|| |=+|.-++..|.+.|. ++|++..|... |-+++.+ ++. ++.
T Consensus 176 L~~~~vlvIGA-Gem~~lva~~L~~~g~--~~i~IaNRT~e------rA~~La~-----------------~~~---~~~ 226 (414)
T COG0373 176 LKDKKVLVIGA-GEMGELVAKHLAEKGV--KKITIANRTLE------RAEELAK-----------------KLG---AEA 226 (414)
T ss_pred cccCeEEEEcc-cHHHHHHHHHHHhCCC--CEEEEEcCCHH------HHHHHHH-----------------HhC---Cee
Confidence 67899999995 9999999999999864 79999999852 3322211 111 222
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCccCC
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAATIR 137 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~v~ 137 (543)
.. .+++...+.++|+||-+-+...
T Consensus 227 ~~------l~el~~~l~~~DvVissTsa~~ 250 (414)
T COG0373 227 VA------LEELLEALAEADVVISSTSAPH 250 (414)
T ss_pred ec------HHHHHHhhhhCCEEEEecCCCc
Confidence 21 2367888899999998866544
|
|
| >PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=83.14 E-value=6.5 Score=41.70 Aligned_cols=34 Identities=12% Similarity=0.163 Sum_probs=29.7
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
.|+|.|.| .|++|..++..|.+.|+ +|++..|++
T Consensus 3 ~~kI~VIG-lG~~G~~~A~~La~~G~---~V~~~D~~~ 36 (415)
T PRK11064 3 FETISVIG-LGYIGLPTAAAFASRQK---QVIGVDINQ 36 (415)
T ss_pred ccEEEEEC-cchhhHHHHHHHHhCCC---EEEEEeCCH
Confidence 47899998 79999999999999997 778888764
|
|
| >PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated | Back alignment and domain information |
|---|
Probab=82.84 E-value=3.4 Score=43.33 Aligned_cols=36 Identities=25% Similarity=0.331 Sum_probs=29.1
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKK 68 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~ 68 (543)
+.|+|+|+|+ |.+|..++..+.+.|+ +|+++...+.
T Consensus 11 ~~~~ilIiG~-g~~~~~~~~a~~~~G~---~v~~~~~~~~ 46 (395)
T PRK09288 11 SATRVMLLGS-GELGKEVAIEAQRLGV---EVIAVDRYAN 46 (395)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCC---EEEEEeCCCC
Confidence 3468999985 8999999999999987 6777776653
|
|
| >PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=82.83 E-value=3.8 Score=40.81 Aligned_cols=37 Identities=22% Similarity=0.477 Sum_probs=29.9
Q ss_pred hhhhhc----CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEE
Q psy7538 23 RIAKTY----ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYL 62 (543)
Q Consensus 23 ~i~~~~----~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~ 62 (543)
.+.++| +||+|.|.|-+..+|+-|..-|++++. .|++
T Consensus 146 ~lL~~y~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~a---tVt~ 186 (282)
T PRK14166 146 KLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGA---TVSV 186 (282)
T ss_pred HHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCC---EEEE
Confidence 344554 699999999999999999999998764 5543
|
|
| >COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=82.82 E-value=3.7 Score=42.11 Aligned_cols=67 Identities=24% Similarity=0.334 Sum_probs=46.7
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+++|.|.|| |.+|+.++..-.+.|+ ++++|.-..... ..++ --..+.++..|
T Consensus 1 ~~tvgIlGG-GQLgrMm~~aa~~lG~---~v~vLdp~~~~P--A~~v----------------------a~~~i~~~~dD 52 (375)
T COG0026 1 MKTVGILGG-GQLGRMMALAAARLGI---KVIVLDPDADAP--AAQV----------------------ADRVIVAAYDD 52 (375)
T ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCC---EEEEecCCCCCc--hhhc----------------------ccceeecCCCC
Confidence 478999995 9999999999999987 778887554331 1111 11244455555
Q ss_pred CCCCCCHHHHHHHhcCccEEE
Q psy7538 110 LKLGISEIDKKELIDNVDIVY 130 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~Vi 130 (543)
++ +++++.+.+|+|-
T Consensus 53 ~~------al~ela~~~DViT 67 (375)
T COG0026 53 PE------ALRELAAKCDVIT 67 (375)
T ss_pred HH------HHHHHHhhCCEEE
Confidence 54 7888888888884
|
|
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=82.76 E-value=1.1 Score=47.67 Aligned_cols=37 Identities=32% Similarity=0.504 Sum_probs=31.8
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
..+++|+|.|+ |-+|..++..|.+.| +.+|++..|+.
T Consensus 178 l~~~~VlViGa-G~iG~~~a~~L~~~G--~~~V~v~~rs~ 214 (417)
T TIGR01035 178 LKGKKALLIGA-GEMGELVAKHLLRKG--VGKILIANRTY 214 (417)
T ss_pred ccCCEEEEECC-hHHHHHHHHHHHHCC--CCEEEEEeCCH
Confidence 67899999996 999999999998875 35899998874
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=82.72 E-value=2.8 Score=44.37 Aligned_cols=36 Identities=17% Similarity=0.273 Sum_probs=30.8
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
..|++|+|.| .|.+|+.++..|...|. +|.+..+.+
T Consensus 210 l~Gk~VlViG-~G~IG~~vA~~lr~~Ga---~ViV~d~dp 245 (425)
T PRK05476 210 IAGKVVVVAG-YGDVGKGCAQRLRGLGA---RVIVTEVDP 245 (425)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhCCC---EEEEEcCCc
Confidence 5899999999 59999999999998875 677777764
|
|
| >PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=82.61 E-value=11 Score=38.85 Aligned_cols=32 Identities=16% Similarity=0.344 Sum_probs=25.7
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEec
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMR 65 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R 65 (543)
.+|.|.|+ |-+|+.+++.+.+. +++ +|.++..
T Consensus 2 ikVaI~G~-GrIGr~va~al~~~-~d~-eLvav~d 33 (341)
T PRK04207 2 IKVGVNGY-GTIGKRVADAVAAQ-PDM-ELVGVAK 33 (341)
T ss_pred eEEEEECC-CHHHHHHHHHHhcC-CCc-EEEEEEC
Confidence 58999998 99999999888775 677 5666654
|
|
| >PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=82.53 E-value=4 Score=40.97 Aligned_cols=33 Identities=21% Similarity=0.267 Sum_probs=27.7
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEE
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLL 63 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l 63 (543)
++||+|.|.|.+..+|+-|..-|++++. .|.+.
T Consensus 156 l~Gk~vvVIGrS~iVGkPla~lL~~~~a---tVtv~ 188 (297)
T PRK14186 156 IAGKKAVVVGRSILVGKPLALMLLAANA---TVTIA 188 (297)
T ss_pred CCCCEEEEECCCccchHHHHHHHHHCCC---EEEEe
Confidence 4699999999999999999999998864 55443
|
|
| >PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=82.35 E-value=1.4 Score=44.09 Aligned_cols=33 Identities=12% Similarity=0.177 Sum_probs=28.3
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
++|.|.|+ |.+|..++..|++.|+ +|.+..|++
T Consensus 2 ~~V~VIG~-G~mG~~iA~~la~~G~---~V~~~d~~~ 34 (288)
T PRK09260 2 EKLVVVGA-GVMGRGIAYVFAVSGF---QTTLVDIKQ 34 (288)
T ss_pred cEEEEECc-cHHHHHHHHHHHhCCC---cEEEEeCCH
Confidence 57999995 9999999999999987 677777764
|
|
| >PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=82.26 E-value=4.1 Score=40.84 Aligned_cols=32 Identities=16% Similarity=0.181 Sum_probs=27.5
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEE
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYL 62 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~ 62 (543)
++||+|.|.|.+..+|+-|..-|++++. .|++
T Consensus 158 l~Gk~vvViGrS~iVGkPla~lL~~~~a---TVt~ 189 (294)
T PRK14187 158 LSGSDAVVIGRSNIVGKPMACLLLGENC---TVTT 189 (294)
T ss_pred CCCCEEEEECCCccchHHHHHHHhhCCC---EEEE
Confidence 5699999999999999999999998864 5544
|
|
| >COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=82.19 E-value=6.6 Score=40.75 Aligned_cols=82 Identities=20% Similarity=0.291 Sum_probs=53.2
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhc--CchhHHHH----hhcCcCCCCceEEEE
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFE--SPVFDALK----TLRGKSILQKIQVIS 104 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~--~~~f~~l~----~~~~~~~~~~v~~i~ 104 (543)
|+|-|.| ||++|-...--|.+.|| +|.+++... ++++.+-+ +|+|+.-- .++ ....++.+
T Consensus 1 MkI~viG-tGYVGLv~g~~lA~~GH---eVv~vDid~------~KV~~ln~g~~PI~EpgLe~ll~~~--~~~gRl~f-- 66 (414)
T COG1004 1 MKITVIG-TGYVGLVTGACLAELGH---EVVCVDIDE------SKVELLNKGISPIYEPGLEELLKEN--LASGRLRF-- 66 (414)
T ss_pred CceEEEC-CchHHHHHHHHHHHcCC---eEEEEeCCH------HHHHHHhCCCCCCcCccHHHHHHhc--cccCcEEE--
Confidence 6888999 89999999999999998 677777653 34443333 45555211 111 00111222
Q ss_pred ccCCCCCCCCCHHHHHHHhcCccEEEEcCccCC
Q psy7538 105 GDITQLKLGISEIDKKELIDNVDIVYHVAATIR 137 (543)
Q Consensus 105 gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~ 137 (543)
. .|.+..+++.|++|-+.++..
T Consensus 67 -----T------td~~~a~~~adv~fIavgTP~ 88 (414)
T COG1004 67 -----T------TDYEEAVKDADVVFIAVGTPP 88 (414)
T ss_pred -----E------cCHHHHHhcCCEEEEEcCCCC
Confidence 1 167788899999999988754
|
|
| >PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=82.15 E-value=4.3 Score=40.43 Aligned_cols=33 Identities=15% Similarity=0.352 Sum_probs=27.8
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEE
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLL 63 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l 63 (543)
++||+|.|.|.+..+|+-|..-|++++. .|++.
T Consensus 154 l~Gk~vvViGrS~iVGkPla~lL~~~~a---tVtic 186 (282)
T PRK14169 154 VAGKRVVIVGRSNIVGRPLAGLMVNHDA---TVTIA 186 (282)
T ss_pred CCCCEEEEECCCccchHHHHHHHHHCCC---EEEEE
Confidence 3699999999999999999999998864 55543
|
|
| >PRK13303 L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=82.08 E-value=7.3 Score=38.58 Aligned_cols=34 Identities=15% Similarity=0.355 Sum_probs=24.7
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRT 66 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~ 66 (543)
++|.|.|. |.+|+.+++.|.+. +++.-+.+..|.
T Consensus 2 ~rVgIiG~-G~iG~~~~~~l~~~-~~~~l~~v~~~~ 35 (265)
T PRK13303 2 MKVAMIGF-GAIGAAVLELLEHD-PDLRVDWVIVPE 35 (265)
T ss_pred cEEEEECC-CHHHHHHHHHHhhC-CCceEEEEEEcC
Confidence 68999997 99999999988775 555333333443
|
|
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=81.94 E-value=4.7 Score=42.06 Aligned_cols=75 Identities=15% Similarity=0.233 Sum_probs=48.7
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
.+.+|+|.|+ |-+|...++.|.+.|. +|.+..|.. +|++.+- . ..... +..+..
T Consensus 166 ~~~~VlViGa-G~vG~~aa~~a~~lGa---~V~v~d~~~------~~~~~l~---------~----~~g~~---v~~~~~ 219 (370)
T TIGR00518 166 EPGDVTIIGG-GVVGTNAAKMANGLGA---TVTILDINI------DRLRQLD---------A----EFGGR---IHTRYS 219 (370)
T ss_pred CCceEEEEcC-CHHHHHHHHHHHHCCC---eEEEEECCH------HHHHHHH---------H----hcCce---eEeccC
Confidence 4567999986 9999999999999875 688888764 2222210 0 00011 112222
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCcc
Q psy7538 109 QLKLGISEIDKKELIDNVDIVYHVAAT 135 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~vd~ViH~AA~ 135 (543)
+ .+++.+.+.++|+||.++..
T Consensus 220 ~------~~~l~~~l~~aDvVI~a~~~ 240 (370)
T TIGR00518 220 N------AYEIEDAVKRADLLIGAVLI 240 (370)
T ss_pred C------HHHHHHHHccCCEEEEcccc
Confidence 2 34678888999999998744
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=81.76 E-value=3.7 Score=36.84 Aligned_cols=28 Identities=18% Similarity=0.437 Sum_probs=25.0
Q ss_pred EEEEcCcchhHHHHHHHHHhhCCCcCEEEEE
Q psy7538 33 IFLSGGSGFLGKVLIEKILRLEPNVKKIYLL 63 (543)
Q Consensus 33 VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l 63 (543)
||++|++.-+|++++..|.++|- +|..+
T Consensus 1 V~L~G~~sKvaraiA~~LC~rgv---~V~m~ 28 (164)
T PF12076_consen 1 VFLTGNTSKVARAIALALCRRGV---QVVML 28 (164)
T ss_pred CeecccccHHHHHHHHHHHhcCC---EEEEe
Confidence 68999999999999999999964 77776
|
This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases []. |
| >PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=81.75 E-value=4.4 Score=40.38 Aligned_cols=32 Identities=22% Similarity=0.364 Sum_probs=27.5
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEE
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYL 62 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~ 62 (543)
+.||+|.|.|.+..+|+-|..-|++++. .|++
T Consensus 155 l~Gk~vvVvGrS~iVGkPla~lL~~~~a---tVti 186 (284)
T PRK14170 155 IEGKRAVVIGRSNIVGKPVAQLLLNENA---TVTI 186 (284)
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHCCC---EEEE
Confidence 4699999999999999999999998864 5543
|
|
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=81.66 E-value=15 Score=36.91 Aligned_cols=38 Identities=8% Similarity=0.154 Sum_probs=31.8
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
...+.+|+|+|++|-+|..+++.+...|. +|++..++.
T Consensus 164 ~~~~~~vlI~g~~~~iG~~~~~~~~~~g~---~v~~~~~~~ 201 (342)
T cd08266 164 LRPGETVLVHGAGSGVGSAAIQIAKLFGA---TVIATAGSE 201 (342)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHcCC---EEEEEeCCH
Confidence 34688999999999999999999998875 677777754
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 543 | ||||
| 4dqv_A | 478 | Crystal Structure Of Reductase (R) Domain Of Non-Ri | 2e-05 |
| >pdb|4DQV|A Chain A, Crystal Structure Of Reductase (R) Domain Of Non-Ribosomal Peptide Synthetase From Mycobacterium Tuberculosis Length = 478 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 543 | |||
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 3e-55 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 4e-15 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-12 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-07 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 2e-11 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 1e-08 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 8e-08 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 2e-07 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 6e-07 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 2e-06 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 4e-06 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 2e-05 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 2e-05 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 3e-05 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 3e-05 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 6e-05 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 1e-04 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 1e-04 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 2e-04 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 3e-04 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 3e-04 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 4e-04 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 4e-04 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 8e-04 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 9e-04 |
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478 | Back alignment and structure |
|---|
Score = 192 bits (489), Expect = 3e-55
Identities = 65/358 (18%), Positives = 139/358 (38%), Gaps = 34/358 (9%)
Query: 14 PKELQALPDRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPN 73
L + + E +++ L+G +GFLG+ L+ ++LR ++ L+R + +
Sbjct: 57 ADTLATAVNLPGPSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDAR 116
Query: 74 QRVEELFESPVFDALKTLRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVA 133
+R+E+ F+S + L+ + + +++V++GD ++ LG+ + + L + VD++ A
Sbjct: 117 RRLEKTFDSGDPELLRHFK-ELAADRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDSA 175
Query: 134 ATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPD 193
A + + N GT +++ ++ K LK FTY+STA + E + D
Sbjct: 176 AMVNAFPYHELFGP-NVAGTAELIRIALTTK-LKPFTYVSTADVGAA----IEPSAFTED 229
Query: 194 DPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMEL-GMPCMILRPS 252
+VI + G + Y +K E L+ E +L +P + R
Sbjct: 230 ADIRVISPTR------------TVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCG 277
Query: 253 IVVPIYKEPLPGWTDNINGPTGLLIGA--------GKGVIRSMYCKNTGMADFLPADVAI 304
+++ G + + T +++ S + D LP
Sbjct: 278 MILADTSY--AGQLNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVA 335
Query: 305 NGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEICDIGKDIVTSKIPFNSTLWYP 362
+ + S + ++ + D I E D ++ + P +
Sbjct: 336 EAIAVLGARVAGSSLAGFA-TYHVMNPHDDGIGLDEYVDW---LIEAGYPIRRIDDFA 389
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 75.8 bits (187), Expect = 4e-15
Identities = 36/262 (13%), Positives = 66/262 (25%), Gaps = 70/262 (26%)
Query: 33 IFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLR 92
+ G +G LG I ++ L+ R P+ +++ L
Sbjct: 16 YAVLGATGLLGHHAARAIRAAGHDLV---LIHR------PSSQIQRLAYLEP-------- 58
Query: 93 GKSILQKIQVISGDITQLKLGISEIDK---KELIDNVDIVYHVAATIRFDEPIKTAVI-L 148
+ ++ D + + +D V A +
Sbjct: 59 --------ECRVAEML---------DHAGLERALRGLDGVIFSAGYYPSRPRRWQEEVAS 101
Query: 149 NTRGTRDMLELSKQMKNLKCFTYISTA---YCHPSEKVLEERTYLPPDDPHQVILRAESM 205
T Q + + Y+ +A HP E +
Sbjct: 102 ALGQTNPFYAACLQAR-VPRILYVGSAYAMPRHPQGLPGHEGLFYDSLP----------- 149
Query: 206 KEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVV-PIYKEPLPG 264
+SY K + E G+P +I P +V+ + P G
Sbjct: 150 --------------SGKSSYVLCKWALDEQAREQARNGLPVVIGIPGMVLGELDIGPTTG 195
Query: 265 --WTDNINGPTGLLIGAGKGVI 284
T NG + + VI
Sbjct: 196 RVITAIGNGEMTHYVAGQRNVI 217
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 68.7 bits (167), Expect = 3e-12
Identities = 66/518 (12%), Positives = 150/518 (28%), Gaps = 127/518 (24%)
Query: 7 APDLVTIPKELQALPDRIAKTYENKSIFLSGGSGFLGK-VLIEKILRLEPNVKKIYLLMR 65
A V+ + L + + K++ + G G GK + +
Sbjct: 127 AKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGS-GKTWVALDVCL------------- 172
Query: 66 TKKGKTPNQRVEELFESPVF--DALKTLRGKSILQKIQVISGDITQLKLGISEIDKKELI 123
+ +V+ + +F + +++L+ +Q + I S+ +
Sbjct: 173 -------SYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSN-IK 224
Query: 124 DNVDIVYHVAATIRFDEPIKTA-VILNTRGTRDMLELSKQMK--NLKCFTYISTAYCHPS 180
+ + + +P + ++L ++ +K NL C ++T + +
Sbjct: 225 LRIHSIQAELRRLLKSKPYENCLLVL--LNVQN----AKAWNAFNLSCKILLTTRFKQVT 278
Query: 181 EKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECM 240
+ + T D H + L +E + + Y C + L E +
Sbjct: 279 DFLSAATTTHISLDHHSMTL----TPDEVKSLLLK-----------YLDCRPQDLPRE-V 322
Query: 241 ELGMPCMILRPSIVVPIYKEPLPGW-------TDNINGPTGLLIGAGK-GVIRSMYCKNT 292
P + SI+ ++ L W D + + + R M+ +
Sbjct: 323 LTTNPRRL---SIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDR-- 377
Query: 293 GMADFLPADVAI-NGVFLFTWDFLNSKESE-------RKSVCNLTSNK----------DY 334
++ F P I + W + + + S+ + +
Sbjct: 378 -LSVF-PPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLEL 435
Query: 335 KITWQEICDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFICCLLFHWIPAYFLDAVILI 394
K+ + + + IV +N + + L + + I + L +
Sbjct: 436 KVKLENEYALHRSIVDH---YNIPKTFDSDDLIPPYLDQYF----YSHI-GHHLKNI--- 484
Query: 395 SGNKPCLVRIQERIHRGFDVFE-YYANNEW-EFKNGNLHQTRPKRNAREIV--------- 443
E R +F + + + E K + NA +
Sbjct: 485 -----------EHPER-MTLFRMVFLDFRFLEQK---IRHDSTAWNASGSILNTLQQLKF 529
Query: 444 --QYCVENDNVDIVKYFEKAVYGARYFLMKESPESLES 479
Y +ND +E+ V FL K + S
Sbjct: 530 YKPYICDNDP-----KYERLVNAILDFLPKIEENLICS 562
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 62.2 bits (150), Expect = 3e-10
Identities = 75/609 (12%), Positives = 146/609 (23%), Gaps = 216/609 (35%)
Query: 15 KELQALPDRIAKTYENKSIFLSGGSG----FLGKVLIEKILRLEPNVKKIYLLMRTKKGK 70
+ D ++ T LS F+ +VL N Y + +
Sbjct: 52 DHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVL-------RIN----YKFLMSPIKT 100
Query: 71 TPNQR--VEELFESPVFDALKTLRGKSILQKIQVISGD-ITQLKLGISEIDKKELIDNVD 127
Q + ++ D + + K V +L+ + EL +
Sbjct: 101 EQRQPSMMTRMYIEQR-D--RLYNDNQVFAKYNVSRLQPYLKLRQAL-----LELRPAKN 152
Query: 128 IVYH----------VAATIRFDEPIKTAV---I--LNTRGTRDMLELSKQMKNLKCFTYI 172
++ ++ + I LN + + + ++ L
Sbjct: 153 VLIDGVLGSGKTWVALDVCL-SYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKL------ 205
Query: 173 STAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLA 232
+ + R D + LR S++ E + + Y CL
Sbjct: 206 ----LYQIDPNWTSR----SDHSSNIKLRIHSIQAELRRLLKSK---------PYENCL- 247
Query: 233 EGLVAECMELGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSM--YCK 290
++L N+ + CK
Sbjct: 248 --------------LVL-----------------LNVQNAK---------AWNAFNLSCK 267
Query: 291 ------NTGMADFLPADVAINGVFL------FTWD--------FLNSKESE-RKSVCNL- 328
+ DFL A + + L T D +L+ + + + V
Sbjct: 268 ILLTTRFKQVTDFLSAATTTH-ISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTN 326
Query: 329 --------TSNKDYKITWQEICDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFICCLLF 380
S +D TW + D +T+ I +S + L
Sbjct: 327 PRRLSIIAESIRDGLATWDNWKHVNCDKLTTII--------------ES----SLNVLEP 368
Query: 381 HWIPAYFLDAVILISGNKPCLVRIQERIHRGFDVFEYYANNEWEFKNGNLHQTRPKRNAR 440
F + P I + W K +
Sbjct: 369 AEYRKMFDRLSVF-----PPSAHIPT------ILLSLI----WFDV--------IKSDVM 405
Query: 441 EIVQYC-----VENDNVDIVKYFEKAVYGARYFLMKESPESLESARKKMKVMYALHITAR 495
+V VE K ++ Y +K E+ + + + Y + T
Sbjct: 406 VVVNKLHKYSLVEKQP----KESTISIPS-IYLELKVKLENEYALHRSIVDHYNIPKTFD 460
Query: 496 CIFLAL------FLWFLSNNFH---------------VFLKLGLFVRGLASLVFSSSADS 534
L F + H VFL F+ + S+A +
Sbjct: 461 SDDLIPPYLDQYFYSHIG--HHLKNIEHPERMTLFRMVFLDFR-FLE--QKIRHDSTAWN 515
Query: 535 TTSRVMTDL 543
+ ++ L
Sbjct: 516 ASGSILNTL 524
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 52.9 bits (126), Expect = 2e-07
Identities = 73/482 (15%), Positives = 142/482 (29%), Gaps = 171/482 (35%)
Query: 154 RDMLELSKQ--MKNLKCF-------TYISTAYCHPSEKVLEERTYLPPDDPHQV-----I 199
+D+L + + + N C + +S + ++ D
Sbjct: 19 KDILSVFEDAFVDNFDCKDVQDMPKSILSKEEI---DHIIMS-----KDAVSGTLRLFWT 70
Query: 200 LRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYK 259
L ++ +EE ++ F +++L N Y + L + E + PS++ +Y
Sbjct: 71 LLSK--QEEMVQKFVEEVLR--IN-YKF---LMSPIKTEQRQ---------PSMMTRMYI 113
Query: 260 EPL-PGWTD-------NINGP-------TGLL-------------IGAGKGVIRSMYCKN 291
E + D N++ LL +G+GK + C +
Sbjct: 114 EQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLS 173
Query: 292 TGMADFLPADVAINGVFLFTWDFLNSKESER-KSVCNLTSNKDYKIT--WQEICDIGKDI 348
+ + +F W LN K ++V + Y+I W D +I
Sbjct: 174 YKVQCKMD-----FKIF---W--LNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNI 223
Query: 349 VTSKIPFNSTLWYPGGTMTQSRLTHFIC------CLLFHWIPAYFLDAV----------- 391
K+ +S Q+ L + CLL + L V
Sbjct: 224 ---KLRIHS---------IQAELRRLLKSKPYENCLL---V----LLNVQNAKAWNAFNL 264
Query: 392 ---ILI-----------SGNKPCLVRIQERIHRGF------DVFEYYANNEWEFKNGNLH 431
IL+ S + + + + Y + + +L
Sbjct: 265 SCKILLTTRFKQVTDFLSAATTTHISL-DHHSMTLTPDEVKSLLLKYLDC----RPQDL- 318
Query: 432 QTRPKRNAREI----VQYCVEN--DNVDIVKYFEKAVYGARYFLMKESPESLESARKKMK 485
P R + E+ D + ++ +++ S LE A + +
Sbjct: 319 ---P-REVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPA--EYR 372
Query: 486 VMY-AL-------HITAR--CIFLALFLWFLSNNFHVFLKLGLFVRGLASLVFSSSADST 535
M+ L HI + +WF V + + + SLV +ST
Sbjct: 373 KMFDRLSVFPPSAHIPTILLSL-----IWFDVIKSDVMVVVNKLHK--YSLVEKQPKEST 425
Query: 536 TS 537
S
Sbjct: 426 IS 427
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 2e-11
Identities = 41/238 (17%), Positives = 70/238 (29%), Gaps = 65/238 (27%)
Query: 25 AKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPV 84
A N ++ + GG+GF+G L++++L L N +V V
Sbjct: 27 ASKLANTNVMVVGGAGFVGSNLVKRLLELGVN------------------QVH------V 62
Query: 85 FDALKTLRGKSILQ--KIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAA---TIRF- 138
D L + ++ ++ IT L L D D V+H+A
Sbjct: 63 VDNLLSAEKINVPDHPAVRFSETSITDDAL------LASLQDEYDYVFHLATYHGNQSSI 116
Query: 139 DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTA--YCHPSEKVLEERTYLPPDDPH 196
+P+ NT T + E K K LK Y + + + H
Sbjct: 117 HDPLADHEN-NTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLH 175
Query: 197 QVILRAESMKEEDLEVFRQDILGEFPNS-YAYTKCLAEGLVAECMEL-GMPCMILRPS 252
+S Y+ +K E + +P + R
Sbjct: 176 N------------------------NDSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQ 209
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 1e-08
Identities = 32/243 (13%), Positives = 65/243 (26%), Gaps = 71/243 (29%)
Query: 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKT 90
K + ++G +G LG+V+ E++ + + L
Sbjct: 4 KRLLVTGAAGQLGRVMRERLAPMAEIL--------------------------RLADLSP 37
Query: 91 LRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNT 150
L + + D+ ++ D + H+ I ++P + + N
Sbjct: 38 LD--PAGPNEECVQCDLADANAV------NAMVAGCDGIVHLGG-ISVEKPFEQILQGNI 88
Query: 151 RGTRDMLELSKQMKNLKCFTYIST--AY-CHPSEKVLEERTYLPPDDPHQVILRAESMKE 207
G ++ E ++ + S+ +P + L PD
Sbjct: 89 IGLYNLYEAARAH-GQPRIVFASSNHTIGYYPQTERLGPDVPARPDGL------------ 135
Query: 208 EDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMEL-GMPCMILRPSIVVPIYKEP--LPG 264
Y +KC E L + G ++R P L
Sbjct: 136 -----------------YGVSKCFGENLARMYFDKFGQETALVRIGSCTPEPNNYRMLST 178
Query: 265 WTD 267
W
Sbjct: 179 WFS 181
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 8e-08
Identities = 27/241 (11%), Positives = 70/241 (29%), Gaps = 71/241 (29%)
Query: 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKT 90
+ ++G +G +G + + L V+ + D +
Sbjct: 3 NRLLVTGAAGGVGSAIRPHLGTLAHEVR-------------------------LSDIVDL 37
Query: 91 LRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNT 150
++ + +++ D+ + +L+ + D + H+ + + P + N
Sbjct: 38 GAAEAHEE---IVACDLADAQ------AVHDLVKDCDGIIHLGG-VSVERPWNDILQANI 87
Query: 151 RGTRDMLELSKQMKNLKCFTYISTA---YCHPSEKVLEERTYLPPDDPHQVILRAESMKE 207
G ++ E ++ + S+ +P ++ PD
Sbjct: 88 IGAYNLYEAARN-LGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSL------------ 134
Query: 208 EDLEVFRQDILGEFPNSYAYTKCLAEGLVAE-CMELGMPCMILRPSIVVPIYKEP--LPG 264
Y +KC E L + + + + +R P K+ +
Sbjct: 135 -----------------YGLSKCFGEDLASLYYHKFDIETLNIRIGSCFPKPKDARMMAT 177
Query: 265 W 265
W
Sbjct: 178 W 178
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311 | Back alignment and structure |
|---|
Score = 52.2 bits (126), Expect = 2e-07
Identities = 36/226 (15%), Positives = 62/226 (27%), Gaps = 69/226 (30%)
Query: 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALK 89
+ I ++GG+GFLG+ ++E I +
Sbjct: 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPI-------------------------ILTRSI 36
Query: 90 TLRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILN 149
+ + + D T D +++VD V H+AAT I N
Sbjct: 37 GNK---AINDYEYRVSDYTLE-------DLINQLNDVDAVVHLAATRGSQGKISEFHD-N 85
Query: 150 TRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTY-LPPDDPHQVILRAESMKEE 208
T+++ + + N+ Y ST Y P E
Sbjct: 86 EILTQNLYDACYE-NNISNIVYASTISA-----------YSDETSLP----------WNE 123
Query: 209 DLEVFRQDILGEFPNS-YAYTKCLAEGLVAECMEL-GMPCMILRPS 252
P+ Y +K E + G+ LR +
Sbjct: 124 KELP--------LPDLMYGVSKLACEHIGNIYSRKKGLCIKNLRFA 161
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313 | Back alignment and structure |
|---|
Score = 50.2 bits (121), Expect = 6e-07
Identities = 28/194 (14%), Positives = 56/194 (28%), Gaps = 55/194 (28%)
Query: 84 VFDALKTLRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIR----FD 139
V D L + + + + +++ D+ + K+ + + V+H+AA +
Sbjct: 29 VIDNLSSGNEEFVNEAARLVKADLAADDI-------KDYLKGAEEVWHIAANPDVRIGAE 81
Query: 140 EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTA--YCHPSEKVLEERTYLPPDDPHQ 197
P + N T +LE ++ + + ST+ Y E D P
Sbjct: 82 NPDEIYRN-NVLATYRLLEAMRK-AGVSRIVFTSTSTVYGEAKVIPTPE------DYPTH 133
Query: 198 VILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMEL-GMPCMILR------ 250
I + Y +K E L+ M I R
Sbjct: 134 PI-----------------------SLYGASKLACEALIESYCHTFDMQAWIYRFANVIG 170
Query: 251 ----PSIVVPIYKE 260
++ +
Sbjct: 171 RRSTHGVIYDFIMK 184
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242 | Back alignment and structure |
|---|
Score = 47.9 bits (114), Expect = 2e-06
Identities = 41/237 (17%), Positives = 68/237 (28%), Gaps = 74/237 (31%)
Query: 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDAL 88
+NKS+F+ G SG G+VL+++IL + K+ L+ R K
Sbjct: 17 QNKSVFILGASGETGRVLLKEILE-QGLFSKVTLIGRRKLTFDEEA-------------- 61
Query: 89 KTLRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVIL 148
+ + D +L D D+ + T R + V +
Sbjct: 62 --------YKNVNQEVVDFEKLD------DYASAFQGHDVGFCCLGTTRGKAGAEGFVRV 107
Query: 149 NTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEE 208
+ EL+K K F +S+ S
Sbjct: 108 DRDYVLKSAELAKAG-GCKHFNLLSSKGADKS---------------------------- 138
Query: 209 DLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMP-CMILRPSIVVPIYKEPLPG 264
Y K E A+ EL + RP +++ +E PG
Sbjct: 139 ------------SNFLYLQVKGEVE---AKVEELKFDRYSVFRPGVLLCDRQESRPG 180
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372 | Back alignment and structure |
|---|
Score = 48.2 bits (115), Expect = 4e-06
Identities = 25/160 (15%), Positives = 55/160 (34%), Gaps = 39/160 (24%)
Query: 21 PDRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLL-MRTKKGKTPNQRVEEL 79
+ + + K + + G +GF+G L ++IL ++ + M+T R+ +L
Sbjct: 15 QTQGPGSMKAKKVLILGVNGFIGHHLSKRILETTDWE--VFGMDMQTD-------RLGDL 65
Query: 80 FESPVFDALKTLRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAA----- 134
+ GDIT K + + + D++ + A
Sbjct: 66 VKHERM---------------HFFEGDITINKEWV-----EYHVKKCDVILPLVAIATPA 105
Query: 135 TIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIST 174
T P++ L+ ++ + + K + ST
Sbjct: 106 TYVKQ-PLRV-FELDFEANLPIVRSAVKYG--KHLVFPST 141
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 2e-05
Identities = 32/174 (18%), Positives = 59/174 (33%), Gaps = 46/174 (26%)
Query: 84 VFDALKTLRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIR----FD 139
V D L + R + + ++ D+ + I D+V+H AA
Sbjct: 29 VVDNLSSGRREFVNPSAELHVRDLK-------DYSWGAGIK-GDVVFHFAANPEVRLSTT 80
Query: 140 EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTA--YCHPSEKVLEERTYLPPDDPHQ 197
EPI N T ++LE ++Q ++ + S++ Y E ++P++
Sbjct: 81 EPIVHFNE-NVVATFNVLEWARQ-TGVRTVVFASSSTVYGDADVIPTPE------EEPYK 132
Query: 198 VILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMEL-GMPCMILR 250
I + Y K E + A L G+ C+ +R
Sbjct: 133 PI-----------------------SVYGAAKAAGEVMCATYARLFGVRCLAVR 163
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 3e-05
Identities = 37/259 (14%), Positives = 65/259 (25%), Gaps = 85/259 (32%)
Query: 37 GGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSI 96
G SG +G L+ + I + T
Sbjct: 6 GSSGQIGTELVPYLAEKYGKKNVIASDIVQ--RDTGG----------------------- 40
Query: 97 LQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRF---DEPIKTAVILNTRGT 153
I+ I+ D++ I +K ++D ++H+A + +P + N GT
Sbjct: 41 ---IKFITLDVSNRDE-IDRAVEKY---SIDAIFHLAGILSAKGEKDPALAYKV-NMNGT 92
Query: 154 RDMLELSKQMKNLKCFTYISTA---YCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDL 210
++LE +KQ ++ ST + + T P
Sbjct: 93 YNILEAAKQ-HRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTM--------------- 136
Query: 211 EVFRQDILGEFPNSYAYTKCLAEGLVAECMEL-GMPCMILRPSIVVPIYKEPLPGWTDNI 269
+ TK AE L E G+ LR I
Sbjct: 137 --------------FGVTKIAAELLGQYYYEKFGLDVRSLRYP---------------GI 167
Query: 270 NGPTGLLIGAGKGVIRSMY 288
++
Sbjct: 168 ISYKAEPTAGTTDYAVEIF 186
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* Length = 357 | Back alignment and structure |
|---|
Score = 45.2 bits (107), Expect = 3e-05
Identities = 35/155 (22%), Positives = 64/155 (41%), Gaps = 29/155 (18%)
Query: 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDA 87
++ K +F++G +GF G L + + VK L P+ LFE+
Sbjct: 7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSL----TAPTVPS-----LFET----- 52
Query: 88 LKTLRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAA----TIRFDEPIK 143
+ +Q GDI + I + + +IV+H+AA + + EP++
Sbjct: 53 ------ARVADGMQSEIGDIRDQNKLLESIREFQ----PEIVFHMAAQPLVRLSYSEPVE 102
Query: 144 TAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCH 178
T N GT +LE + + +K I++ C+
Sbjct: 103 T-YSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCY 136
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369 | Back alignment and structure |
|---|
Score = 44.5 bits (105), Expect = 6e-05
Identities = 7/60 (11%), Positives = 20/60 (33%), Gaps = 1/60 (1%)
Query: 120 KELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHP 179
+ + D + H+A R + + ++ N +L++ + S+
Sbjct: 41 ESALLKADFIVHLAGVNRPEHDKEFSLG-NVSYLDHVLDILTRNTKKPAILLSSSIQATQ 99
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 1e-04
Identities = 40/234 (17%), Positives = 70/234 (29%), Gaps = 59/234 (25%)
Query: 24 IAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYL--LMRTKKGKTPNQRVEELFE 81
I EN++I ++GG+GF+G L P K + L F+
Sbjct: 4 IDDELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFK 63
Query: 82 SPVFDALKTLRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAA----TIR 137
+ + K +VI+ DI ++ + D ++H AA T+
Sbjct: 64 NLIGF------------KGEVIAADINNP-----LDLRRLEKLHFDYLFHQAAVSDTTML 106
Query: 138 FDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQ 197
N + ++LE+++ K K Y S+A Y P
Sbjct: 107 --NQELVMKT-NYQAFLNLLEIARS-KKAK-VIYASSA----G-------VYGNTKAP-- 148
Query: 198 VILRAESMKEEDLEVFRQDILGEFPNS-YAYTKCLAEGLVAECMELGMPCMILR 250
E P + Y ++K + + LR
Sbjct: 149 --------NVVGKN--------ESPENVYGFSKLCMD-EFVLSHSNDNVQVGLR 185
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 1e-04
Identities = 33/247 (13%), Positives = 78/247 (31%), Gaps = 67/247 (27%)
Query: 37 GGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSI 96
G +G +G+ L ++++ K G + VE+ + D +
Sbjct: 21 GAAGMVGRKLTQRLV---------------KDGSLGGKPVEKFT---LIDVFQPEAPAGF 62
Query: 97 LQKIQVISGDITQLKLGISEIDKKELIDN-VDIVYHVAATI---RFDEPIKTAVILNTRG 152
+ + D++ ++L++ D+++H+AA + + K I N G
Sbjct: 63 SGAVDARAADLSAPGEA------EKLVEARPDVIFHLAAIVSGEAELDFDKGYRI-NLDG 115
Query: 153 TRDMLELSKQMKNLKC----FTYISTA--YCHPSEKVLEERTYLPPDDPHQVILRAESMK 206
TR + + + + S+ + P + + + P
Sbjct: 116 TRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPL------------- 162
Query: 207 EEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMEL-GMPCMILR-PSIVVPIYKEPLPG 264
SY K + E L+++ + +R P+I + +P
Sbjct: 163 ----------------TSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRP-GKPNAA 205
Query: 265 WTDNING 271
+ +
Sbjct: 206 ASGFFSN 212
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 2e-04
Identities = 35/244 (14%), Positives = 69/244 (28%), Gaps = 35/244 (14%)
Query: 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDAL 88
+ + GG G+ G + + V + L+R +E L
Sbjct: 10 HGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLG--LESLTPIASIHDR 67
Query: 89 KTLRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDE-------P 141
+ + I++ GDI + ++E K D V H
Sbjct: 68 ISRWKALTGKSIELYVGDICDFEF-LAESFKSFEPD---SVVHFGEQRSAPYSMIDRSRA 123
Query: 142 IKTAVILNTRGTRDMLELSKQMKNLKCFTYISTA--YCHPSEKVLEERTYLPPDDPHQVI 199
+ T N GT ++L K+ + T Y P+ + E + + +
Sbjct: 124 VYTQHN-NVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTL 182
Query: 200 LRAESMKEEDLEVFRQDILGEFPNS-YAYTKCLAEGLVAECMEL-GMPCMILRPSIVVPI 257
+ +S Y +K +A + G+ L +V +
Sbjct: 183 PYPKQ-----------------ASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGV 225
Query: 258 YKEP 261
+
Sbjct: 226 KTDE 229
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 3e-04
Identities = 51/236 (21%), Positives = 78/236 (33%), Gaps = 70/236 (29%)
Query: 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEEL--FESPVFD 86
+ K ++G +GF+G L+E +L+L +Q+V L F +
Sbjct: 26 QPKVWLITGVAGFIGSNLLETLLKL-------------------DQKVVGLDNFATGHQR 66
Query: 87 ALKTLRGKSILQ---KIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIR----FD 139
L +R + + I GDI L VD V H AA +
Sbjct: 67 NLDEVRSLVSEKQWSNFKFIQGDIRNLDD------CNNACAGVDYVLHQAALGSVPRSIN 120
Query: 140 EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTA--YCHPSEKVLEERTYLPPDDPHQ 197
+PI + N G +ML ++ ++ FTY +++ Y LP
Sbjct: 121 DPITSNAT-NIDGFLNMLIAARD-AKVQSFTYAASSSTYGDH--------PGLP------ 164
Query: 198 VILRAESMKEEDLEVFRQDILGEFPNS-YAYTKCLAEGLVAECMEL-GMPCMILRP 251
K ED P S YA TK + E G + LR
Sbjct: 165 --------KVEDTIG--------KPLSPYAVTKYVNELYADVFSRCYGFSTIGLRY 204
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 3e-04
Identities = 39/230 (16%), Positives = 73/230 (31%), Gaps = 61/230 (26%)
Query: 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDAL 88
EN I ++G GF+ + ++ V + K N+ + E F
Sbjct: 28 ENLKISITGAGGFIASHIARRLKHEGHYV----IASDWK----KNEHMTEDMFCDEFH-- 77
Query: 89 KTLRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATI-----RFDEPIK 143
++ + + + ++ + VD V+++AA +
Sbjct: 78 -------------LVDLRVME--------NCLKVTEGVDHVFNLAADMGGMGFIQSNHSV 116
Query: 144 TAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAE 203
NT + +M+E ++ +K F Y S+A +P K L +
Sbjct: 117 IMYN-NTMISFNMIEAARI-NGIKRFFYASSACIYPEFKQ------LETTNVS------- 161
Query: 204 SMKEEDLEVFRQDILGEFPNS-YAYTKCLAEGLVAECMEL-GMPCMILRP 251
+KE D P + K E L + G+ C I R
Sbjct: 162 -LKESDAWP-------AEPQDAFGLEKLATEELCKHYNKDFGIECRIGRF 203
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 4e-04
Identities = 37/235 (15%), Positives = 75/235 (31%), Gaps = 79/235 (33%)
Query: 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDAL 88
E + I ++GG+GF+G +++ + + I V D L
Sbjct: 45 EGRMIIVTGGAGFIGSNIVKALNDK--GITDIL----------------------VVDNL 80
Query: 89 KT------LRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAA----TIRF 138
K L +I + D + +I E +V+ ++H A T
Sbjct: 81 KDGTKFVNLVDLNI--ADYMDKEDF------LIQIMAGEEFGDVEAIFHEGACSSTTEWD 132
Query: 139 DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTA--YCHPSEKVLEERTYLPPDDPH 196
+ + N + ++++L + + + F Y S+A Y + +E R Y P +
Sbjct: 133 GKYMMDN---NYQYSKELLHYCLE-REIP-FLYASSAATYGGRTSDFIESREYEKPLNV- 186
Query: 197 QVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMEL-GMPCMILR 250
+ Y+K L + V + + + R
Sbjct: 187 ----------------------------FGYSKFLFDEYVRQILPEANSQIVGFR 213
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 4e-04
Identities = 23/148 (15%), Positives = 48/148 (32%), Gaps = 32/148 (21%)
Query: 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALK 89
N I + G G +G L +K+ +L E+ + ++
Sbjct: 2 NPKILIIGACGQIGTELTQKLRKLYGT------------------------ENVIASDIR 37
Query: 90 TLRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAA--TIRFDEPIKTAVI 147
L ++ + I + + + +Y +AA + ++ A
Sbjct: 38 KLN-TDVVNSGPFEVVNALDFN-QIEHLVEVH---KITDIYLMAALLSATAEKNPAFAWD 92
Query: 148 LNTRGTRDMLELSKQMKNLKCFTYISTA 175
LN +L L+K K +K + S+
Sbjct: 93 LNMNSLFHVLNLAKA-KKIKKIFWPSSI 119
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 8e-04
Identities = 22/139 (15%), Positives = 44/139 (31%), Gaps = 39/139 (28%)
Query: 33 IFLSGGSGFLGKVLIEKILRLEPNVKKIYLL--MRTKKGKTPNQRVEELFESPVFDALKT 90
+ + G +GF+G L E++L + ++Y L + P F
Sbjct: 3 VLILGVNGFIGNHLTERLL--REDHYEVYGLDIGSDA--------ISRFLNHPHF----- 47
Query: 91 LRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAA-----TIRFDEPIKTA 145
+ GDI+ I KK D+V + A + P++
Sbjct: 48 ----------HFVEGDISIHSEWIEYHVKK-----CDVVLPLVAIATPIEYTRN-PLRV- 90
Query: 146 VILNTRGTRDMLELSKQMK 164
L+ ++ + +
Sbjct: 91 FELDFEENLRIIRYCVKYR 109
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310 | Back alignment and structure |
|---|
Score = 40.6 bits (96), Expect = 9e-04
Identities = 23/144 (15%), Positives = 48/144 (33%), Gaps = 41/144 (28%)
Query: 114 ISEIDKKELIDNVDIVYHVAA----TIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCF 169
+ +I E +V+ ++H A T + + N + ++++L + + + F
Sbjct: 57 LIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDN---NYQYSKELLHYCLE-REIP-F 111
Query: 170 TYISTA--YCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAY 227
Y S+A Y + +E R Y P + Y Y
Sbjct: 112 LYASSAATYGGRTSDFIESREYEKPLNV-----------------------------YGY 142
Query: 228 TKCLAEGLVAECMEL-GMPCMILR 250
+K L + V + + + R
Sbjct: 143 SKFLFDEYVRQILPEANSQIVGFR 166
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 543 | |||
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 100.0 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 100.0 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 100.0 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 100.0 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 100.0 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 100.0 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 100.0 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 100.0 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 100.0 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 100.0 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 100.0 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 100.0 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 100.0 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 100.0 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 100.0 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 100.0 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 100.0 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 100.0 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 100.0 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 100.0 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 100.0 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 100.0 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 100.0 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 100.0 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 100.0 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 100.0 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 100.0 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 100.0 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 100.0 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 100.0 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 100.0 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 100.0 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 100.0 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 100.0 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 100.0 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 100.0 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 100.0 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.98 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.98 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.98 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.98 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.97 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.97 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.97 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.97 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.97 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.97 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.97 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.97 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.97 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.97 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.97 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.97 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.97 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.97 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.97 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.97 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.97 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.97 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.96 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.96 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.96 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.96 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.96 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.95 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.95 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.95 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.95 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.95 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.95 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.94 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.93 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.93 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.93 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.93 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.92 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.92 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.92 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.92 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.92 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.91 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.9 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.9 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.9 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.89 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.88 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.88 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.87 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.87 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.85 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.85 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.85 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.85 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.84 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.84 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.84 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.84 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.84 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.84 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.83 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.83 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.83 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.83 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.83 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.83 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.83 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.82 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.82 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.82 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.82 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.82 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.81 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.81 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.81 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.81 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.81 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.81 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.81 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.81 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.81 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.81 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.81 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.81 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.81 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.81 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.8 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.8 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.8 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.8 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.8 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.8 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.8 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.8 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.8 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.8 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.8 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.79 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.79 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.79 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.79 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.79 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.79 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.79 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.79 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.79 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.79 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.79 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.79 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.79 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.79 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.79 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.79 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.79 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.79 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.79 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.78 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.78 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.78 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.78 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.78 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.78 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.78 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.78 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.78 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.78 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.78 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.78 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.78 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.78 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.78 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.78 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.78 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.78 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.77 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.77 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.77 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.77 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.77 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.77 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.77 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.77 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.77 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.77 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.77 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.77 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.77 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.77 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.77 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.77 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.77 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.77 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.77 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.77 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.77 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.77 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.77 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.76 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.76 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.76 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.76 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.76 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.76 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.76 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.76 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.76 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.76 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.76 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.76 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.76 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.76 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.76 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.76 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.76 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.75 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.75 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.75 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.75 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.75 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.75 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.75 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.75 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.75 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.75 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.75 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.75 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.75 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.75 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.75 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.75 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.75 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.75 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.75 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.75 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.75 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.74 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.74 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.74 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.74 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.74 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.74 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.74 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.74 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.74 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.73 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.73 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.73 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.73 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.73 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.73 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.72 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.72 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.72 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.72 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.72 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.72 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.72 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.71 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.71 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.71 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.71 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.7 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.7 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.7 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.7 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.7 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.69 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.69 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.69 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.68 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.68 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.67 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.67 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.67 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.66 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.66 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.65 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.65 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.64 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.64 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.64 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.63 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.63 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 99.62 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 99.6 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.6 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 99.59 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 99.57 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.57 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 99.57 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.56 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 99.54 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 99.53 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 99.53 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 99.52 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 99.52 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 99.51 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 99.48 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 99.45 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 99.44 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 99.29 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 99.27 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 99.24 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 99.23 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 99.2 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 99.17 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 99.16 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 99.03 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 98.98 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 98.95 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 98.93 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 98.88 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 98.84 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 98.77 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 98.74 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 98.7 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 98.68 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 98.58 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 98.32 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 98.32 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 98.17 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 98.04 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 97.97 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 97.94 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 97.88 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 97.82 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 97.79 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 97.66 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 97.62 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 97.57 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 97.56 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 97.55 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 97.54 | |
| 1dih_A | 273 | Dihydrodipicolinate reductase; oxidoreductase; HET | 97.42 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 97.39 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 97.38 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 96.87 | |
| 3hhp_A | 312 | Malate dehydrogenase; MDH, citric acid cycle, TCA | 96.81 | |
| 1p9o_A | 313 | Phosphopantothenoylcysteine synthetase; ligase; 2. | 96.78 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 96.62 | |
| 2nqt_A | 352 | N-acetyl-gamma-glutamyl-phosphate reductase; apopr | 96.58 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 96.37 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 96.34 | |
| 2hjs_A | 340 | USG-1 protein homolog; aspartate-semialdehyde dehy | 96.32 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 96.32 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 96.25 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 96.11 | |
| 1xyg_A | 359 | Putative N-acetyl-gamma-glutamyl-phosphate reduct; | 95.99 | |
| 1y6j_A | 318 | L-lactate dehydrogenase; southeast collaboratory f | 95.95 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 95.93 | |
| 4f3y_A | 272 | DHPR, dihydrodipicolinate reductase; structural ge | 95.9 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 95.89 | |
| 4h7p_A | 345 | Malate dehydrogenase; ssgcid, structural G seattle | 95.84 | |
| 2ozp_A | 345 | N-acetyl-gamma-glutamyl-phosphate reductase; amino | 95.71 | |
| 2ph5_A | 480 | Homospermidine synthase; alpha-beta protein, struc | 95.71 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 95.7 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 95.68 | |
| 3dr3_A | 337 | N-acetyl-gamma-glutamyl-phosphate reductase; csgid | 95.65 | |
| 2x0j_A | 294 | Malate dehydrogenase; oxidoreductase, hyperthermop | 95.64 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 95.63 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 95.62 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 95.51 | |
| 1oju_A | 294 | MDH, malate dehydrogenase; hyperthermophilic, oxid | 95.48 | |
| 3pwk_A | 366 | Aspartate-semialdehyde dehydrogenase; NADP binding | 95.48 | |
| 2r00_A | 336 | Aspartate-semialdehyde dehydrogenase; conformation | 95.42 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 95.36 | |
| 3tz6_A | 344 | Aspartate-semialdehyde dehydrogenase; asadh, ASD, | 95.35 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 95.34 | |
| 3p7m_A | 321 | Malate dehydrogenase; putative dehydrogenase, enzy | 95.31 | |
| 3nep_X | 314 | Malate dehydrogenase; halophIle, molecular adpatat | 95.31 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 95.22 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 95.13 | |
| 1t4b_A | 367 | Aspartate-semialdehyde dehydrogenase; asadh, HOSR, | 95.09 | |
| 3d0o_A | 317 | L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly | 95.05 | |
| 1ys4_A | 354 | Aspartate-semialdehyde dehydrogenase; oxidoreducta | 95.04 | |
| 3pzr_A | 370 | Aspartate-semialdehyde dehydrogenase; NADP, oxidor | 95.01 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 94.97 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 94.9 | |
| 3tl2_A | 315 | Malate dehydrogenase; center for structural genomi | 94.86 | |
| 2xxj_A | 310 | L-LDH, L-lactate dehydrogenase; oxidoreductase, hy | 94.86 | |
| 2zqz_A | 326 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ro | 94.76 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 94.76 | |
| 3uw3_A | 377 | Aspartate-semialdehyde dehydrogenase; structural g | 94.73 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 94.7 | |
| 1vkn_A | 351 | N-acetyl-gamma-glutamyl-phosphate reductase; TM178 | 94.69 | |
| 1ez4_A | 318 | Lactate dehydrogenase; rossmann fold, oxidoreducta | 94.59 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 94.58 | |
| 3gvi_A | 324 | Malate dehydrogenase; NAD, oxidoreductase, tricarb | 94.57 | |
| 7mdh_A | 375 | Protein (malate dehydrogenase); chloroplastic mala | 94.43 | |
| 4dpk_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 94.39 | |
| 4dpl_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 94.39 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 94.28 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 94.28 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 94.26 | |
| 2ep5_A | 350 | 350AA long hypothetical aspartate-semialdehyde deh | 94.25 | |
| 3h8v_A | 292 | Ubiquitin-like modifier-activating enzyme 5; rossm | 94.22 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 94.2 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 94.15 | |
| 4aj2_A | 331 | L-lactate dehydrogenase A chain; oxidoreductase-in | 94.13 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 94.13 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 94.12 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 93.95 | |
| 2yv3_A | 331 | Aspartate-semialdehyde dehydrogenase; aspartate pa | 93.7 | |
| 3h5n_A | 353 | MCCB protein; ubiquitin-activating enzyme, microci | 93.61 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 93.57 | |
| 3hsk_A | 381 | Aspartate-semialdehyde dehydrogenase; candida albi | 93.56 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 93.52 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 93.47 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 93.35 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 93.26 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 93.24 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 93.13 | |
| 3p2o_A | 285 | Bifunctional protein fold; structural genomics, ce | 93.06 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 93.03 | |
| 2i6t_A | 303 | Ubiquitin-conjugating enzyme E2-like isoform A; L- | 92.95 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 92.91 | |
| 1ldn_A | 316 | L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA | 92.77 | |
| 2v6b_A | 304 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ra | 92.61 | |
| 3ldh_A | 330 | Lactate dehydrogenase; oxidoreductase, CHOH donor, | 92.58 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 92.38 | |
| 3ijp_A | 288 | DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, | 92.38 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 92.31 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 92.12 | |
| 4e4t_A | 419 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 92.07 | |
| 1a5z_A | 319 | L-lactate dehydrogenase; oxidoreductase, glycolysi | 92.05 | |
| 3l07_A | 285 | Bifunctional protein fold; structural genomics, ID | 92.0 | |
| 4a26_A | 300 | Putative C-1-tetrahydrofolate synthase, cytoplasm; | 91.91 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 91.79 | |
| 1guz_A | 310 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 91.69 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 91.64 | |
| 4a5o_A | 286 | Bifunctional protein fold; oxidoreductase, hydrola | 91.58 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 91.38 | |
| 3ngx_A | 276 | Bifunctional protein fold; methylenetetrahydrofola | 91.21 | |
| 1hyh_A | 309 | L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2 | 91.13 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 91.09 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 90.98 | |
| 1y81_A | 138 | Conserved hypothetical protein; hyperthermophIle, | 90.92 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 90.61 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 90.56 | |
| 1y8q_A | 346 | Ubiquitin-like 1 activating enzyme E1A; SUMO, hete | 90.14 | |
| 3qy9_A | 243 | DHPR, dihydrodipicolinate reductase; rossmann fold | 90.04 | |
| 3orq_A | 377 | N5-carboxyaminoimidazole ribonucleotide synthetas; | 89.97 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 89.94 | |
| 2d4a_B | 308 | Malate dehydrogenase; archaea, hyperthermophIle, o | 89.93 | |
| 1t2d_A | 322 | LDH-P, L-lactate dehydrogenase; ternary complex, o | 89.83 | |
| 1lld_A | 319 | L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N | 89.74 | |
| 3dfz_A | 223 | SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase | 89.73 | |
| 1oi7_A | 288 | Succinyl-COA synthetase alpha chain; SCS, ligase, | 89.61 | |
| 3gxh_A | 157 | Putative phosphatase (DUF442); YP_001181608.1, str | 89.56 | |
| 2hjr_A | 328 | Malate dehydrogenase; malaria, structural genomics | 89.52 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 89.48 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 89.33 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 89.2 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 89.1 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 88.93 | |
| 3lk7_A | 451 | UDP-N-acetylmuramoylalanine--D-glutamate ligase; a | 88.92 | |
| 3vh1_A | 598 | Ubiquitin-like modifier-activating enzyme ATG7; au | 88.87 | |
| 3q2o_A | 389 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 88.79 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 88.79 | |
| 2pv7_A | 298 | T-protein [includes: chorismate mutase (EC 5.4.99 | 88.76 | |
| 1a4i_A | 301 | Methylenetetrahydrofolate dehydrogenase / methenyl | 88.72 | |
| 3gg2_A | 450 | Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd | 88.55 | |
| 2nu8_A | 288 | Succinyl-COA ligase [ADP-forming] subunit alpha; c | 88.49 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 88.39 | |
| 1y8q_B | 640 | Anthracycline-, ubiquitin-like 2 activating enzyme | 88.38 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 88.33 | |
| 2c2x_A | 281 | Methylenetetrahydrofolate dehydrogenase- methenylt | 88.32 | |
| 1edz_A | 320 | 5,10-methylenetetrahydrofolate dehydrogenase; nucl | 88.32 | |
| 1b0a_A | 288 | Protein (fold bifunctional protein); folate, dehyd | 88.18 | |
| 1mv8_A | 436 | GMD, GDP-mannose 6-dehydrogenase; rossman fold, do | 88.14 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 87.94 | |
| 3rui_A | 340 | Ubiquitin-like modifier-activating enzyme ATG7; au | 87.85 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 87.79 | |
| 2d59_A | 144 | Hypothetical protein PH1109; COA binding, structur | 87.76 | |
| 2ewd_A | 317 | Lactate dehydrogenase,; protein-substrate_cofactor | 87.34 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 87.19 | |
| 4dgs_A | 340 | Dehydrogenase; structural genomics, PSI-biology, N | 86.93 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 86.8 | |
| 3ax6_A | 380 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 86.7 | |
| 3pp8_A | 315 | Glyoxylate/hydroxypyruvate reductase A; structural | 86.7 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 86.54 | |
| 4gsl_A | 615 | Ubiquitin-like modifier-activating enzyme ATG7; ub | 86.5 | |
| 3k5i_A | 403 | Phosphoribosyl-aminoimidazole carboxylase; purine | 86.35 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 86.07 | |
| 2hk9_A | 275 | Shikimate dehydrogenase; shikimate pathway, drug d | 85.8 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 85.62 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 85.39 | |
| 1u8x_X | 472 | Maltose-6'-phosphate glucosidase; structural genom | 85.04 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 84.79 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 84.63 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 84.43 | |
| 3hg7_A | 324 | D-isomer specific 2-hydroxyacid dehydrogenase FAM | 84.39 | |
| 2yv1_A | 294 | Succinyl-COA ligase [ADP-forming] subunit alpha; C | 84.33 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 84.31 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 84.22 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 84.08 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 84.01 | |
| 3evt_A | 324 | Phosphoglycerate dehydrogenase; structural genomic | 83.74 | |
| 3vtf_A | 444 | UDP-glucose 6-dehydrogenase; two discrete alpha/be | 83.63 |
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-36 Score=309.94 Aligned_cols=259 Identities=19% Similarity=0.189 Sum_probs=205.8
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
.++|+|||||||||||++|+++|++.|+++ +|+++.|....... ++++. .....++.++.+|+
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~-~v~~~~~~~~~~~~-~~l~~---------------~~~~~~~~~~~~Dl 84 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETY-KIINFDALTYSGNL-NNVKS---------------IQDHPNYYFVKGEI 84 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTTE-EEEEEECCCTTCCG-GGGTT---------------TTTCTTEEEEECCT
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCCc-EEEEEeccccccch-hhhhh---------------hccCCCeEEEEcCC
Confidence 567999999999999999999999999765 78888887633221 11111 11225899999999
Q ss_pred CCCCCCCCHHHHHHHhcC--ccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC-
Q psy7538 108 TQLKLGISEIDKKELIDN--VDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE- 181 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~--vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~- 181 (543)
++++ ++..++++ +|+|||+||..... +.....+++|+.|+.+++++|++. ++++|||+||+++++..
T Consensus 85 ~d~~------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~v~~SS~~vy~~~~ 157 (346)
T 4egb_A 85 QNGE------LLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKY-PHIKLVQVSTDEVYGSLG 157 (346)
T ss_dssp TCHH------HHHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHS-TTSEEEEEEEGGGGCCCC
T ss_pred CCHH------HHHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEeCchHHhCCCC
Confidence 9875 78888887 99999999987654 445668999999999999999998 88999999999777653
Q ss_pred --CcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecC
Q psy7538 182 --KVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIY 258 (543)
Q Consensus 182 --~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~ 258 (543)
.+++|+....|. +.|+.+|+.+|+++..+.. .+++++++||+.|||+.
T Consensus 158 ~~~~~~E~~~~~p~-----------------------------~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~ 208 (346)
T 4egb_A 158 KTGRFTEETPLAPN-----------------------------SPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPY 208 (346)
T ss_dssp SSCCBCTTSCCCCC-----------------------------SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTT
T ss_pred cCCCcCCCCCCCCC-----------------------------ChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcC
Confidence 356776544333 8999999999999999877 69999999999999997
Q ss_pred CCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccH
Q psy7538 259 KEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITW 338 (543)
Q Consensus 259 ~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~ 338 (543)
..+. .....++..+..|....++++++..+++||++|+|++++.++..... +++||++++ +++|+
T Consensus 209 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~------g~~~~i~~~--~~~s~ 273 (346)
T 4egb_A 209 QYPE-------KLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGRV------GEVYNIGGN--NEKTN 273 (346)
T ss_dssp CCTT-------SHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCCT------TCEEEECCS--CCEEH
T ss_pred CCcc-------chHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCCC------CCEEEECCC--CceeH
Confidence 6431 12234667777887777789999999999999999999999887654 789999998 88999
Q ss_pred HHHHHHHhhhhcCccC
Q psy7538 339 QEICDIGKDIVTSKIP 354 (543)
Q Consensus 339 ~e~~~~i~~~~G~~~p 354 (543)
.|+++.+.+.+|.+.+
T Consensus 274 ~e~~~~i~~~~g~~~~ 289 (346)
T 4egb_A 274 VEVVEQIITLLGKTKK 289 (346)
T ss_dssp HHHHHHHHHHHTCCGG
T ss_pred HHHHHHHHHHhCCCcc
Confidence 9999999999966544
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-36 Score=303.57 Aligned_cols=244 Identities=21% Similarity=0.179 Sum_probs=202.8
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+|+|||||||||||++|+++|++.|+ +|++++|+... .. .++++++.+|++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~------------------------~~-~~~~~~~~~Dl~- 52 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGN---TPIILTRSIGN------------------------KA-INDYEYRVSDYT- 52 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCCC------------------------------CCEEEECCCC-
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCC---EEEEEeCCCCc------------------------cc-CCceEEEEcccc-
Confidence 47999999999999999999999987 89999998321 11 237889999999
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC--Cccccc
Q psy7538 110 LKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE--KVLEER 187 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~--~~i~E~ 187 (543)
++ ++..+++++|+|||+||..... .....+++|+.|+.+++++|++. ++++|||+||.++++.. .+++|+
T Consensus 53 ~~------~~~~~~~~~d~Vih~a~~~~~~-~~~~~~~~n~~~~~~ll~a~~~~-~~~r~v~~SS~~vyg~~~~~~~~E~ 124 (311)
T 3m2p_A 53 LE------DLINQLNDVDAVVHLAATRGSQ-GKISEFHDNEILTQNLYDACYEN-NISNIVYASTISAYSDETSLPWNEK 124 (311)
T ss_dssp HH------HHHHHTTTCSEEEECCCCCCSS-SCGGGTHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGCCCGGGCSBCTT
T ss_pred HH------HHHHhhcCCCEEEEccccCCCC-ChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEccHHHhCCCCCCCCCCC
Confidence 65 7999999999999999988765 45567899999999999999998 89999999999776643 356776
Q ss_pred ccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCCCCCCCC
Q psy7538 188 TYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKEPLPGWT 266 (543)
Q Consensus 188 ~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~p~~gw~ 266 (543)
..+.|. +.|+.+|+.+|+++..+.. .+++++|+||+.|||+...+.
T Consensus 125 ~~~~p~-----------------------------~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~---- 171 (311)
T 3m2p_A 125 ELPLPD-----------------------------LMYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNN---- 171 (311)
T ss_dssp SCCCCS-----------------------------SHHHHHHHHHHHHHHHHHHHSCCEEEEEEECEEECSCC--C----
T ss_pred CCCCCC-----------------------------chhHHHHHHHHHHHHHHHHHcCCCEEEEeeCceeCcCCCCC----
Confidence 544433 8999999999999999877 799999999999999976531
Q ss_pred CCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHHHHHh
Q psy7538 267 DNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEICDIGK 346 (543)
Q Consensus 267 d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~~~i~ 346 (543)
.....++..+..|....++++++..+++||++|+|++++.++.+... +++||++++ +++|+.|+++.+.
T Consensus 172 ---~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~~------~~~~~i~~~--~~~s~~e~~~~i~ 240 (311)
T 3m2p_A 172 ---YMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKV------SGTFNIGSG--DALTNYEVANTIN 240 (311)
T ss_dssp ---CHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTTC------CEEEEECCS--CEECHHHHHHHHH
T ss_pred ---CHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCCC------CCeEEeCCC--CcccHHHHHHHHH
Confidence 12334667777888877789999999999999999999999876543 789999998 8999999999999
Q ss_pred hhhcCccC
Q psy7538 347 DIVTSKIP 354 (543)
Q Consensus 347 ~~~G~~~p 354 (543)
+.+|.+.+
T Consensus 241 ~~~g~~~~ 248 (311)
T 3m2p_A 241 NAFGNKDN 248 (311)
T ss_dssp HHTTCTTC
T ss_pred HHhCCCCc
Confidence 99965543
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-36 Score=309.26 Aligned_cols=266 Identities=21% Similarity=0.214 Sum_probs=210.4
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
.+++|+|||||||||||++|+++|++.|+ +|++++|...+. .+.+..+.. ...+....+++++.+|
T Consensus 22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~--~~~~~~~~~---------~~~~~~~~~~~~~~~D 87 (351)
T 3ruf_A 22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQ---VVIGLDNFSTGH--QYNLDEVKT---------LVSTEQWSRFCFIEGD 87 (351)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSSCC--HHHHHHHHH---------TSCHHHHTTEEEEECC
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCCCCc--hhhhhhhhh---------ccccccCCceEEEEcc
Confidence 46789999999999999999999999986 899999987543 222222110 0000011579999999
Q ss_pred CCCCCCCCCHHHHHHHhcCccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC--
Q psy7538 107 ITQLKLGISEIDKKELIDNVDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE-- 181 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~-- 181 (543)
+++++ ++..+++++|+|||+||..... +.....+++|+.|+.+++++|++. ++++|||+||+.+++..
T Consensus 88 l~d~~------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~v~~SS~~vyg~~~~ 160 (351)
T 3ruf_A 88 IRDLT------TCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNA-QVQSFTYAASSSTYGDHPA 160 (351)
T ss_dssp TTCHH------HHHHHTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGGGTTCCC
T ss_pred CCCHH------HHHHHhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEecHHhcCCCCC
Confidence 99875 8999999999999999976543 345568899999999999999998 79999999999766543
Q ss_pred CcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCC
Q psy7538 182 KVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKE 260 (543)
Q Consensus 182 ~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~ 260 (543)
.+++|+....|. +.|+.+|..+|+++..+.. .+++++|+||+.|||+...
T Consensus 161 ~~~~E~~~~~p~-----------------------------~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~ 211 (351)
T 3ruf_A 161 LPKVEENIGNPL-----------------------------SPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQD 211 (351)
T ss_dssp SSBCTTCCCCCC-----------------------------SHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCC
T ss_pred CCCccCCCCCCC-----------------------------ChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCC
Confidence 467776544443 8999999999999998876 6999999999999999876
Q ss_pred CCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHH
Q psy7538 261 PLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQE 340 (543)
Q Consensus 261 p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e 340 (543)
+...|. .....++..+..|....+++++++.+++||++|+|++++.++..... ..+++||++++ +++|+.|
T Consensus 212 ~~~~~~---~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~----~~~~~~ni~~~--~~~s~~e 282 (351)
T 3ruf_A 212 PNGAYA---AVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSALAKDS----AKDNIYNVAVG--DRTTLNE 282 (351)
T ss_dssp CCSTTC---CHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGG----GCSEEEEESCS--CCEEHHH
T ss_pred CCcchh---hHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhhccc----cCCCEEEeCCC--CcccHHH
Confidence 532110 11234666777888777889999999999999999999998877221 14789999999 8999999
Q ss_pred HHHHHhhhhcC
Q psy7538 341 ICDIGKDIVTS 351 (543)
Q Consensus 341 ~~~~i~~~~G~ 351 (543)
+++.+.+.+|.
T Consensus 283 ~~~~i~~~~g~ 293 (351)
T 3ruf_A 283 LSGYIYDELNL 293 (351)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHhCc
Confidence 99999999965
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-35 Score=305.42 Aligned_cols=270 Identities=13% Similarity=0.114 Sum_probs=206.9
Q ss_pred hhcCCCEEEEEcCcchhHHHHHHHHHhh-CCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEE
Q psy7538 26 KTYENKSIFLSGGSGFLGKVLIEKILRL-EPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVIS 104 (543)
Q Consensus 26 ~~~~~~~VlITGatGFiG~~Lv~~Ll~~-g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~ 104 (543)
..+++|+|||||||||||++|+++|+++ |+ +|++++|+...... .....+++++.
T Consensus 20 ~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~---~V~~~~r~~~~~~~---------------------~~~~~~v~~~~ 75 (372)
T 3slg_A 20 GSMKAKKVLILGVNGFIGHHLSKRILETTDW---EVFGMDMQTDRLGD---------------------LVKHERMHFFE 75 (372)
T ss_dssp ---CCCEEEEESCSSHHHHHHHHHHHHHSSC---EEEEEESCCTTTGG---------------------GGGSTTEEEEE
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhCCCC---EEEEEeCChhhhhh---------------------hccCCCeEEEe
Confidence 3467899999999999999999999998 76 89999998643210 01125899999
Q ss_pred ccCC-CCCCCCCHHHHHHHhcCccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccC
Q psy7538 105 GDIT-QLKLGISEIDKKELIDNVDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPS 180 (543)
Q Consensus 105 gDl~-~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~ 180 (543)
+|++ +++ .+..+++++|+|||+||..... +.....+++|+.|+.+++++|++. + ++|||+||+.+++.
T Consensus 76 ~Dl~~d~~------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~-~~~v~~SS~~vyg~ 147 (372)
T 3slg_A 76 GDITINKE------WVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY-G-KHLVFPSTSEVYGM 147 (372)
T ss_dssp CCTTTCHH------HHHHHHHHCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHH-T-CEEEEECCGGGGBS
T ss_pred CccCCCHH------HHHHHhccCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHh-C-CcEEEeCcHHHhCC
Confidence 9999 654 7888889999999999987643 345678899999999999999998 6 99999999976654
Q ss_pred C--CcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecC
Q psy7538 181 E--KVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIY 258 (543)
Q Consensus 181 ~--~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~ 258 (543)
. .++.|+..+.+.+|. ....+.|+.||..+|++++.+...+++++|+||+.|||+.
T Consensus 148 ~~~~~~~e~~~~~~~~p~----------------------~~p~~~Y~~sK~~~E~~~~~~~~~g~~~~ilRp~~v~G~~ 205 (372)
T 3slg_A 148 CADEQFDPDASALTYGPI----------------------NKPRWIYACSKQLMDRVIWGYGMEGLNFTLFRPFNWIGPG 205 (372)
T ss_dssp CCCSSBCTTTCCEEECCT----------------------TCTTHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSEECSS
T ss_pred CCCCCCCccccccccCCC----------------------CCCCCcHHHHHHHHHHHHHHHHHCCCCEEEEccccccCCC
Confidence 3 355665433111100 0111689999999999999887657999999999999998
Q ss_pred CCCCCCCCCCCCch-HHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeec-CCCCcc
Q psy7538 259 KEPLPGWTDNINGP-TGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTS-NKDYKI 336 (543)
Q Consensus 259 ~~p~~gw~d~~~g~-~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s-~~~~~~ 336 (543)
..+..++.....+. ..++..+..|....+++++++.+++||++|+|++++.++..... . ..+++||+++ + +++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~-~--~~~~~~ni~~~~--~~~ 280 (372)
T 3slg_A 206 LDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALMKIIENSNG-V--ATGKIYNIGNPN--NNF 280 (372)
T ss_dssp CCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHHHHHHCGGG-T--TTTEEEEECCTT--CEE
T ss_pred cccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHHHHHhcccC-c--CCCceEEeCCCC--CCc
Confidence 76533222222222 34666777888777888999999999999999999999987641 0 1478999999 5 789
Q ss_pred cHHHHHHHHhhhhcCccC
Q psy7538 337 TWQEICDIGKDIVTSKIP 354 (543)
Q Consensus 337 t~~e~~~~i~~~~G~~~p 354 (543)
|+.|+++.+.+.+|...+
T Consensus 281 s~~e~~~~i~~~~g~~~~ 298 (372)
T 3slg_A 281 SVRELANKMLELAAEFPE 298 (372)
T ss_dssp EHHHHHHHHHHHHHHCTT
T ss_pred cHHHHHHHHHHHhCCCcc
Confidence 999999999999965533
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-35 Score=297.72 Aligned_cols=312 Identities=15% Similarity=0.140 Sum_probs=222.5
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCH-HHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTP-NQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~-~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
.+|+|||||||||||++|+++|++.|+ +|+++.|....... .+++... ...++.++.+|+
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~---~V~~~~r~~~~~~~~~~~~~~~----------------~~~~~~~~~~Dl 64 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGY---DVVIADNLVNSKREAIARIEKI----------------TGKTPAFHETDV 64 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTC---EEEEECCCSSSCTHHHHHHHHH----------------HSCCCEEECCCT
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCC---cEEEEecCCcchHHHHHHHHhh----------------cCCCceEEEeec
Confidence 468999999999999999999999987 88999997654321 1222111 124688999999
Q ss_pred CCCCCCCCHHHHHHHhc--CccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccC--
Q psy7538 108 TQLKLGISEIDKKELID--NVDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPS-- 180 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~--~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~-- 180 (543)
++++ ++..+++ ++|+|||+||..... +.....+++|+.|+.+++++|++. ++++|||+||+.+++.
T Consensus 65 ~d~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~~~g~~~ 137 (341)
T 3enk_A 65 SDER------ALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRER-AVKRIVFSSSATVYGVPE 137 (341)
T ss_dssp TCHH------HHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGBCSCS
T ss_pred CCHH------HHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhC-CCCEEEEEecceEecCCC
Confidence 9875 7888888 899999999987542 334568899999999999999997 7899999999866654
Q ss_pred CCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-c-CCcEEEEecCeeeecC
Q psy7538 181 EKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-L-GMPCMILRPSIVVPIY 258 (543)
Q Consensus 181 ~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~-~lp~~IlRps~V~G~~ 258 (543)
..+++|+....|. +.|+.||+.+|++++.++. . +++++++||++|||+.
T Consensus 138 ~~~~~e~~~~~~~-----------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~ 188 (341)
T 3enk_A 138 RSPIDETFPLSAT-----------------------------NPYGQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAH 188 (341)
T ss_dssp SSSBCTTSCCBCS-----------------------------SHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCC
T ss_pred CCCCCCCCCCCCC-----------------------------ChhHHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCc
Confidence 3356676443333 7999999999999998876 3 5999999999999997
Q ss_pred CCCCCCCCCCC--CchHHHHHHHhcC--ceeEEee------cCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEe
Q psy7538 259 KEPLPGWTDNI--NGPTGLLIGAGKG--VIRSMYC------KNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNL 328 (543)
Q Consensus 259 ~~p~~gw~d~~--~g~~~~~~~~~~g--~~~~~~~------~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni 328 (543)
.....|...+. .....++.....+ ....+++ ++++.+|+|||+|+|++++.++..... . ..+++||+
T Consensus 189 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~-~--~~~~~~ni 265 (341)
T 3enk_A 189 ESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHVVDLARGHIAALDALER-R--DASLTVNL 265 (341)
T ss_dssp TTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHH-H--TSCEEEEE
T ss_pred cccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEHHHHHHHHHHHHHhhhc-C--CcceEEEe
Confidence 65433332111 1222344444444 3344566 789999999999999999999887321 0 14789999
Q ss_pred ecCCCCcccHHHHHHHHhhhhcCccCCCCccccCccccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHH
Q psy7538 329 TSNKDYKITWQEICDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFICCLLFHWIPAYFLDAVILISGNKPCLVRIQERI 408 (543)
Q Consensus 329 ~s~~~~~~t~~e~~~~i~~~~G~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~d~~~~~~G~kP~~~~~~~~l 408 (543)
+++ +++|+.|+++.+.+.+|.+.+.......+... ... ....+.+.+.+||+|+.. +.+.+
T Consensus 266 ~~~--~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~--~~~--------------~~d~~k~~~~lG~~p~~~-l~~~l 326 (341)
T 3enk_A 266 GTG--RGYSVLEVVRAFEKASGRAVPYELVARRPGDV--AEC--------------YANPAAAAETIGWKAERD-LERMC 326 (341)
T ss_dssp SCS--CCEEHHHHHHHHHHHHCSCCCEEEECCCTTCC--SEE--------------CBCCHHHHHHHCCCCCCC-HHHHH
T ss_pred CCC--CceeHHHHHHHHHHHhCCCcceeeCCCCCCCc--ccc--------------ccCHHHHHHHcCCCCCCC-HHHHH
Confidence 998 89999999999999996654432221111110 000 012344567899999874 44444
Q ss_pred HHhhcccccccc
Q psy7538 409 HRGFDVFEYYAN 420 (543)
Q Consensus 409 ~~~~~~~~~f~~ 420 (543)
.+ +++||..
T Consensus 327 ~~---~~~~~~~ 335 (341)
T 3enk_A 327 AD---HWRWQEN 335 (341)
T ss_dssp HH---HHHHHHH
T ss_pred HH---HHHHHHh
Confidence 43 4555543
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-35 Score=296.93 Aligned_cols=247 Identities=17% Similarity=0.218 Sum_probs=192.6
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|||||||||||++|+++|++.|+ +|+++.|...... .....+++++.+|++++
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~----------------------~~~~~~~~~~~~Dl~d~ 55 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGY---EVVVVDNLSSGRR----------------------EFVNPSAELHVRDLKDY 55 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC---EEEEECCCSSCCG----------------------GGSCTTSEEECCCTTST
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC---EEEEEeCCCCCch----------------------hhcCCCceEEECccccH
Confidence 6899999999999999999999987 8899999765421 11235788999999987
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCCC---cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC--Cccc
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIRF---DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE--KVLE 185 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~--~~i~ 185 (543)
+ +..++++ |+|||+||.... .+.....+++|+.|+.+++++|++. ++++|||+||+.+++.. .+++
T Consensus 56 ~-------~~~~~~~-d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~vyg~~~~~~~~ 126 (312)
T 3ko8_A 56 S-------WGAGIKG-DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQT-GVRTVVFASSSTVYGDADVIPTP 126 (312)
T ss_dssp T-------TTTTCCC-SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCSCSSSSBC
T ss_pred H-------HHhhcCC-CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeCcHHHhCCCCCCCCC
Confidence 4 4455566 999999996543 3456778999999999999999997 78999999999776543 3566
Q ss_pred ccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCCCCCC
Q psy7538 186 ERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKEPLPG 264 (543)
Q Consensus 186 E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~p~~g 264 (543)
|+....|. +.|+.||+.+|++++.+.. .+++++++||+.|||+...+
T Consensus 127 e~~~~~p~-----------------------------~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~g~~~~~--- 174 (312)
T 3ko8_A 127 EEEPYKPI-----------------------------SVYGAAKAAGEVMCATYARLFGVRCLAVRYANVVGPRLRH--- 174 (312)
T ss_dssp TTSCCCCC-----------------------------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCS---
T ss_pred CCCCCCCC-----------------------------ChHHHHHHHHHHHHHHHHHHhCCCEEEEeeccccCcCCCC---
Confidence 76443333 8999999999999998876 69999999999999987542
Q ss_pred CCCCCCchHHHHHHHhcC-ceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHHH
Q psy7538 265 WTDNINGPTGLLIGAGKG-VIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEICD 343 (543)
Q Consensus 265 w~d~~~g~~~~~~~~~~g-~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~~ 343 (543)
.....++..+..+ ....+.+++++.+++||++|+|++++.++.+... . ...+++||++++ +++|+.|+++
T Consensus 175 -----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~-~-~~~~~~~ni~~~--~~~s~~e~~~ 245 (312)
T 3ko8_A 175 -----GVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEE-M-DAPFLALNVGNV--DAVRVLDIAQ 245 (312)
T ss_dssp -----SHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHH-S-CCSEEEEEESCS--SCEEHHHHHH
T ss_pred -----ChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccc-c-CCCCcEEEEcCC--CceeHHHHHH
Confidence 1123355555555 4455788899999999999999999999887221 0 024789999998 8999999999
Q ss_pred HHhhhhcCc
Q psy7538 344 IGKDIVTSK 352 (543)
Q Consensus 344 ~i~~~~G~~ 352 (543)
.+.+.+|.+
T Consensus 246 ~i~~~~g~~ 254 (312)
T 3ko8_A 246 IVAEVLGLR 254 (312)
T ss_dssp HHHHHHTCC
T ss_pred HHHHHhCCC
Confidence 999999654
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-35 Score=299.41 Aligned_cols=256 Identities=18% Similarity=0.175 Sum_probs=201.0
Q ss_pred hhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEE
Q psy7538 25 AKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVIS 104 (543)
Q Consensus 25 ~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~ 104 (543)
.+-.++|+|||||||||||++|+++|++.|+ +|++++|.... .++.++.
T Consensus 14 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~---~V~~~~r~~~~----------------------------~~~~~~~ 62 (347)
T 4id9_A 14 LVPRGSHMILVTGSAGRVGRAVVAALRTQGR---TVRGFDLRPSG----------------------------TGGEEVV 62 (347)
T ss_dssp -------CEEEETTTSHHHHHHHHHHHHTTC---CEEEEESSCCS----------------------------SCCSEEE
T ss_pred ccccCCCEEEEECCCChHHHHHHHHHHhCCC---EEEEEeCCCCC----------------------------CCccEEe
Confidence 3456789999999999999999999999987 78899997632 3677899
Q ss_pred ccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcc-cHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccC---
Q psy7538 105 GDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDE-PIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPS--- 180 (543)
Q Consensus 105 gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~-~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~--- 180 (543)
+|+++++ ++..+++++|+|||+||...... .....+++|+.|+.+++++|++. ++++|||+||+++++.
T Consensus 63 ~Dl~d~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~V~~SS~~vyg~~~~ 135 (347)
T 4id9_A 63 GSLEDGQ------ALSDAIMGVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAA-GVRRFVFASSGEVYPENRP 135 (347)
T ss_dssp SCTTCHH------HHHHHHTTCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGGTTTTSC
T ss_pred cCcCCHH------HHHHHHhCCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEECCHHHhCCCCC
Confidence 9999875 78999999999999999887643 34779999999999999999997 8999999999977754
Q ss_pred -CCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeee---
Q psy7538 181 -EKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVV--- 255 (543)
Q Consensus 181 -~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~--- 255 (543)
..+++|+....|. +.|+.||..+|++++.+.. .+++++|+||+.||
T Consensus 136 ~~~~~~E~~~~~~~-----------------------------~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~ 186 (347)
T 4id9_A 136 EFLPVTEDHPLCPN-----------------------------SPYGLTKLLGEELVRFHQRSGAMETVILRFSHTQDAT 186 (347)
T ss_dssp SSSSBCTTSCCCCC-----------------------------SHHHHHHHHHHHHHHHHHHHSSSEEEEEEECEEECGG
T ss_pred CCCCcCCCCCCCCC-----------------------------ChHHHHHHHHHHHHHHHHHhcCCceEEEccceEeecc
Confidence 2356666443333 8999999999999998877 78999999999999
Q ss_pred ----------ecCCCCCCCCCC----CCCchHHHHHHHhcCceeEEeecCCccccc----chHHHHHHHHHHHhhhhccc
Q psy7538 256 ----------PIYKEPLPGWTD----NINGPTGLLIGAGKGVIRSMYCKNTGMADF----LPADVAINGVFLFTWDFLNS 317 (543)
Q Consensus 256 ----------G~~~~p~~gw~d----~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~----V~vddva~a~i~a~~~~~~~ 317 (543)
|+...+.+.+.+ .......++..+..|....+.++++..+++ ||++|+|++++.++.....
T Consensus 187 ~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~~- 265 (347)
T 4id9_A 187 ELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRPFRMHITDTRDMVAGILLALDHPEA- 265 (347)
T ss_dssp GTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGGG-
T ss_pred cccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCCcccCCccCcEeHHHHHHHHHHHhcCccc-
Confidence 654322100000 000112355566777777788999999999 9999999999999988743
Q ss_pred CCCCCCcEEEeecCCCCcccHHHHHHHHhhhhcCccC
Q psy7538 318 KESERKSVCNLTSNKDYKITWQEICDIGKDIVTSKIP 354 (543)
Q Consensus 318 ~~~~~~~vyni~s~~~~~~t~~e~~~~i~~~~G~~~p 354 (543)
.+++||++++ +++|+.|+++.+.+.+|.+.+
T Consensus 266 ----~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~~~ 296 (347)
T 4id9_A 266 ----AGGTFNLGAD--EPADFAALLPKIAALTGLPIV 296 (347)
T ss_dssp ----TTEEEEESCS--SCEEHHHHHHHHHHHHCCCEE
T ss_pred ----CCCeEEECCC--CcccHHHHHHHHHHHhCCCCc
Confidence 3789999999 899999999999999966543
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-35 Score=296.51 Aligned_cols=250 Identities=12% Similarity=0.118 Sum_probs=193.6
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
++++|+|||||||||||++|+++|++.|+ +.. .....+..+.+|
T Consensus 3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~---------~~~---------------------------~~~~~~~~~~~D 46 (319)
T 4b8w_A 3 YFQSMRILVTGGSGLVGKAIQKVVADGAG---------LPG---------------------------EDWVFVSSKDAD 46 (319)
T ss_dssp CCCCCEEEEETCSSHHHHHHHHHHHTTTC---------CTT---------------------------CEEEECCTTTCC
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhcCC---------ccc---------------------------ccccccCceecc
Confidence 46889999999999999999999999985 111 111234455789
Q ss_pred CCCCCCCCCHHHHHHHhcC--ccEEEEcCccCCC----cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccC
Q psy7538 107 ITQLKLGISEIDKKELIDN--VDIVYHVAATIRF----DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPS 180 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~~--vd~ViH~AA~v~~----~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~ 180 (543)
+++++ ++..++++ +|+|||+||.+.. .+.....+++|+.||.+++++|++. ++++|||+||+++++.
T Consensus 47 ~~d~~------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~v~~SS~~vyg~ 119 (319)
T 4b8w_A 47 LTDTA------QTRALFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEV-GARKVVSCLSTCIFPD 119 (319)
T ss_dssp TTSHH------HHHHHHHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEECCGGGSCS
T ss_pred cCCHH------HHHHHHhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEEcchhhcCC
Confidence 98865 78888876 9999999998652 3456678999999999999999998 7999999999977654
Q ss_pred C--CcccccccC-CCCChHHHHHHHhhcchhhhhhhhhhccCCCCc-hHHHHHHHHHHHHHHHhh-cCCcEEEEecCeee
Q psy7538 181 E--KVLEERTYL-PPDDPHQVILRAESMKEEDLEVFRQDILGEFPN-SYAYTKCLAEGLVAECME-LGMPCMILRPSIVV 255 (543)
Q Consensus 181 ~--~~i~E~~y~-~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn-~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~ 255 (543)
. .+++|+... .|..| .+ .|+.||..+|++++.+.+ .+++++|+||+.||
T Consensus 120 ~~~~~~~E~~~~~~~~~p--------------------------~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~ 173 (319)
T 4b8w_A 120 KTTYPIDETMIHNGPPHN--------------------------SNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVF 173 (319)
T ss_dssp SCCSSBCGGGGGBSCCCS--------------------------SSHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEE
T ss_pred CCCCCccccccccCCCCC--------------------------CcchHHHHHHHHHHHHHHHHHhhCCCEEEEeecccc
Confidence 3 356666411 01110 03 699999999999998876 69999999999999
Q ss_pred ecCCCCCCCCCCCCCchHHHHHH----HhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecC
Q psy7538 256 PIYKEPLPGWTDNINGPTGLLIG----AGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSN 331 (543)
Q Consensus 256 G~~~~p~~gw~d~~~g~~~~~~~----~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~ 331 (543)
|+...+..+. + .....++.. +..|....+++++++.+++|||+|+|++++.++..... ..+++||++++
T Consensus 174 Gp~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~----~~~~~~ni~~~ 246 (319)
T 4b8w_A 174 GPHDNFNIED--G-HVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWVLREYNE----VEPIILSVGEE 246 (319)
T ss_dssp CTTCCCCTTT--S-CHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHHHHHHHHCCC----SSCEEECCCGG
T ss_pred CCCCCCCCcc--c-cccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHHHHHHhcccc----CCceEEEecCC
Confidence 9987542210 0 111223444 67777777889999999999999999999999987543 24679999998
Q ss_pred CCCcccHHHHHHHHhhhhcCccC
Q psy7538 332 KDYKITWQEICDIGKDIVTSKIP 354 (543)
Q Consensus 332 ~~~~~t~~e~~~~i~~~~G~~~p 354 (543)
+++|+.|+++.+.+.+|.+.+
T Consensus 247 --~~~s~~e~~~~i~~~~g~~~~ 267 (319)
T 4b8w_A 247 --DEVSIKEAAEAVVEAMDFHGE 267 (319)
T ss_dssp --GCEEHHHHHHHHHHHTTCCSC
T ss_pred --CceeHHHHHHHHHHHhCCCCc
Confidence 899999999999999965544
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=299.57 Aligned_cols=261 Identities=20% Similarity=0.158 Sum_probs=202.5
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHh--hCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILR--LEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~--~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
+++|+|||||||||||++|+++|++ .|+ +|++++|.........+..+-+.. .. .....++.++.+
T Consensus 8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~-----~~----~~~~~~~~~~~~ 75 (362)
T 3sxp_A 8 LENQTILITGGAGFVGSNLAFHFQENHPKA---KVVVLDKFRSNTLFSNNRPSSLGH-----FK----NLIGFKGEVIAA 75 (362)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHCTTS---EEEEEECCCCC-------CCCCCC-----GG----GGTTCCSEEEEC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHhhCCCC---eEEEEECCCccccccccchhhhhh-----hh----hccccCceEEEC
Confidence 5789999999999999999999999 776 899999976522111111000000 00 112246789999
Q ss_pred cCCCCCCCCCHHHHHHH-hcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCC-
Q psy7538 106 DITQLKLGISEIDKKEL-IDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEK- 182 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l-~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~- 182 (543)
|+++++ +++.+ ..++|+|||+||.... .+.....+++|+.|+.+++++|++. +++ |||+||+++++...
T Consensus 76 Dl~d~~------~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-~~~-~V~~SS~~vyg~~~~ 147 (362)
T 3sxp_A 76 DINNPL------DLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSK-KAK-VIYASSAGVYGNTKA 147 (362)
T ss_dssp CTTCHH------HHHHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHT-TCE-EEEEEEGGGGCSCCS
T ss_pred CCCCHH------HHHHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHc-CCc-EEEeCcHHHhCCCCC
Confidence 999875 78888 7899999999997764 3667889999999999999999997 676 99999986665432
Q ss_pred cccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCC
Q psy7538 183 VLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPL 262 (543)
Q Consensus 183 ~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~ 262 (543)
+++|+..+.|. +.|+.||+.+|++++.+.. .++++++||++|||+...+.
T Consensus 148 ~~~E~~~~~p~-----------------------------~~Y~~sK~~~E~~~~~~~~-~~~~~~lR~~~v~Gp~~~~~ 197 (362)
T 3sxp_A 148 PNVVGKNESPE-----------------------------NVYGFSKLCMDEFVLSHSN-DNVQVGLRYFNVYGPREFYK 197 (362)
T ss_dssp SBCTTSCCCCS-----------------------------SHHHHHHHHHHHHHHHTTT-TSCEEEEEECSEESTTCGGG
T ss_pred CCCCCCCCCCC-----------------------------ChhHHHHHHHHHHHHHHhc-cCCEEEEEeCceeCcCCCCC
Confidence 66666544333 8999999999999999987 59999999999999977542
Q ss_pred CCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHH
Q psy7538 263 PGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEIC 342 (543)
Q Consensus 263 ~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~ 342 (543)
..+. .....++..+..|....+++++++.+++||++|+|++++.++..... + +||++++ +++|+.|++
T Consensus 198 ~~~~---~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~~~~------g-~~~i~~~--~~~s~~e~~ 265 (362)
T 3sxp_A 198 EKTA---SMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQKS------G-VYNVGYS--QARSYNEIV 265 (362)
T ss_dssp GGGS---CHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTTCSSC------E-EEEESCS--CEEEHHHHH
T ss_pred Ccch---hHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHhcCCC------C-EEEeCCC--CCccHHHHH
Confidence 2110 11234667777888777778899999999999999999999876543 5 9999998 899999999
Q ss_pred HHHhhhhc
Q psy7538 343 DIGKDIVT 350 (543)
Q Consensus 343 ~~i~~~~G 350 (543)
+.+.+.+|
T Consensus 266 ~~i~~~~g 273 (362)
T 3sxp_A 266 SILKEHLG 273 (362)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHcC
Confidence 99999996
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=293.82 Aligned_cols=243 Identities=16% Similarity=0.209 Sum_probs=192.6
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|||||||||||++|+++|++.|. ++++.|...... .....++.++.+|+++
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~----~v~~~~~~~~~~----------------------~~~~~~~~~~~~Dl~~- 54 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESNE----IVVIDNLSSGNE----------------------EFVNEAARLVKADLAA- 54 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTSC----EEEECCCSSCCG----------------------GGSCTTEEEECCCTTT-
T ss_pred CEEEEECCCchHHHHHHHHHHhCCC----EEEEEcCCCCCh----------------------hhcCCCcEEEECcCCh-
Confidence 6899999999999999999999972 344444432211 1223578999999998
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCCC---cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC--Cccc
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIRF---DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE--KVLE 185 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~--~~i~ 185 (543)
+ ++..+++++|+|||+||.... .+.....+++|+.|+.+++++|++. ++++|||+||..+++.. .+++
T Consensus 55 ~------~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~iv~~SS~~vyg~~~~~~~~ 127 (313)
T 3ehe_A 55 D------DIKDYLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKA-GVSRIVFTSTSTVYGEAKVIPTP 127 (313)
T ss_dssp S------CCHHHHTTCSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGGCSCSSSSBC
T ss_pred H------HHHHHhcCCCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeCchHHhCcCCCCCCC
Confidence 4 577888999999999996532 3567789999999999999999997 78999999998666543 3566
Q ss_pred ccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCCCCCC
Q psy7538 186 ERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKEPLPG 264 (543)
Q Consensus 186 E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~p~~g 264 (543)
|+....|. +.|+.||..+|.+++.++. .+++++++||+.|||+...+
T Consensus 128 E~~~~~~~-----------------------------~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~--- 175 (313)
T 3ehe_A 128 EDYPTHPI-----------------------------SLYGASKLACEALIESYCHTFDMQAWIYRFANVIGRRSTH--- 175 (313)
T ss_dssp TTSCCCCC-----------------------------SHHHHHHHHHHHHHHHHHHHTTCEEEEEECSCEESTTCCC---
T ss_pred CCCCCCCC-----------------------------CHHHHHHHHHHHHHHHHHHhcCCCEEEEeeccccCcCCCc---
Confidence 65433333 7999999999999999877 79999999999999987642
Q ss_pred CCCCCCchHHHHHHHhcC-ceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHHH
Q psy7538 265 WTDNINGPTGLLIGAGKG-VIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEICD 343 (543)
Q Consensus 265 w~d~~~g~~~~~~~~~~g-~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~~ 343 (543)
.....++..+..+ ....+.+++++.+++||++|+|++++.++.... .+++||++++ +++|+.|+++
T Consensus 176 -----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~------~~~~~ni~~~--~~~s~~e~~~ 242 (313)
T 3ehe_A 176 -----GVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGDE------RVNIFNIGSE--DQIKVKRIAE 242 (313)
T ss_dssp -----SHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTCCS------SEEEEECCCS--CCEEHHHHHH
T ss_pred -----ChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhccCC------CCceEEECCC--CCeeHHHHHH
Confidence 1122355555555 445578899999999999999999999987332 3789999998 8999999999
Q ss_pred HHhhhhcCc
Q psy7538 344 IGKDIVTSK 352 (543)
Q Consensus 344 ~i~~~~G~~ 352 (543)
.+.+.+|.+
T Consensus 243 ~i~~~~g~~ 251 (313)
T 3ehe_A 243 IVCEELGLS 251 (313)
T ss_dssp HHHHHTTCC
T ss_pred HHHHHhCCC
Confidence 999999654
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-34 Score=289.92 Aligned_cols=249 Identities=17% Similarity=0.151 Sum_probs=195.5
Q ss_pred hhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEE
Q psy7538 25 AKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVIS 104 (543)
Q Consensus 25 ~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~ 104 (543)
..+.+.|+|||||||||||++|+++|++.|+ +|+++.|.... . . . ++.++.
T Consensus 7 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~G~---~V~~~~r~~~~-~----------------------~--l-~~~~~~ 57 (321)
T 2pk3_A 7 HHHHGSMRALITGVAGFVGKYLANHLTEQNV---EVFGTSRNNEA-K----------------------L--P-NVEMIS 57 (321)
T ss_dssp ------CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCTTC-C----------------------C--T-TEEEEE
T ss_pred ccccCcceEEEECCCChHHHHHHHHHHHCCC---EEEEEecCCcc-c----------------------c--c-eeeEEE
Confidence 3466789999999999999999999999986 88999997643 1 1 1 678899
Q ss_pred ccCCCCCCCCCHHHHHHHhcC--ccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCcccc
Q psy7538 105 GDITQLKLGISEIDKKELIDN--VDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHP 179 (543)
Q Consensus 105 gDl~~~~lgls~~~~~~l~~~--vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~ 179 (543)
+|+++++ ++..++++ +|+|||+||..... +.....+++|+.|+.+++++|++++++++|||+||..+++
T Consensus 58 ~Dl~d~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g 131 (321)
T 2pk3_A 58 LDIMDSQ------RVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYG 131 (321)
T ss_dssp CCTTCHH------HHHHHHHHHCCSEEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTB
T ss_pred CCCCCHH------HHHHHHHhcCCCEEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcC
Confidence 9999865 78888875 99999999987532 3567889999999999999998874589999999997765
Q ss_pred C----CCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCee
Q psy7538 180 S----EKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIV 254 (543)
Q Consensus 180 ~----~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V 254 (543)
. ..+++|+....|. +.|+.||+.+|++++.++. .+++++++||+.|
T Consensus 132 ~~~~~~~~~~E~~~~~~~-----------------------------~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v 182 (321)
T 2pk3_A 132 MILPEESPVSEENQLRPM-----------------------------SPYGVSKASVGMLARQYVKAYGMDIIHTRTFNH 182 (321)
T ss_dssp SCCGGGCSBCTTSCCBCC-----------------------------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEE
T ss_pred CCCCCCCCCCCCCCCCCC-----------------------------CccHHHHHHHHHHHHHHHHHcCCCEEEEEeCcc
Confidence 4 2356665433332 7999999999999998776 6899999999999
Q ss_pred eecCCCCCCCCCCCCCchHHHHHHHhc---C--ceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEee
Q psy7538 255 VPIYKEPLPGWTDNINGPTGLLIGAGK---G--VIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLT 329 (543)
Q Consensus 255 ~G~~~~p~~gw~d~~~g~~~~~~~~~~---g--~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~ 329 (543)
||+...+ + .....++..+.. | ......++++...++++++|+|++++.++..... +++||++
T Consensus 183 ~g~~~~~------~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~------g~~~~i~ 249 (321)
T 2pk3_A 183 IGPGQSL------G-FVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQYGKT------GDVYNVC 249 (321)
T ss_dssp ECTTCCT------T-SHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHHHHHHCCT------TCEEEES
T ss_pred cCcCCCC------C-chHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHHhCCCC------CCeEEeC
Confidence 9997643 0 011234444444 6 3445678888999999999999999999876533 6899999
Q ss_pred cCCCCcccHHHHHHHHhhhhcCc
Q psy7538 330 SNKDYKITWQEICDIGKDIVTSK 352 (543)
Q Consensus 330 s~~~~~~t~~e~~~~i~~~~G~~ 352 (543)
++ .++|+.|+++.+.+.+|.+
T Consensus 250 ~~--~~~s~~e~~~~i~~~~g~~ 270 (321)
T 2pk3_A 250 SG--IGTRIQDVLDLLLAMANVK 270 (321)
T ss_dssp CS--CEEEHHHHHHHHHHHSSSC
T ss_pred CC--CCeeHHHHHHHHHHHhCCC
Confidence 98 8999999999999999654
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=288.88 Aligned_cols=259 Identities=21% Similarity=0.262 Sum_probs=198.3
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
++|+|||||||||||++|+++|++.|++. +|+++.|....... ++++++ ....++.++.+|++
T Consensus 2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~-~V~~~~r~~~~~~~-~~~~~~---------------~~~~~~~~~~~Dl~ 64 (336)
T 2hun_A 2 HSMKLLVTGGMGFIGSNFIRYILEKHPDW-EVINIDKLGYGSNP-ANLKDL---------------EDDPRYTFVKGDVA 64 (336)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHCTTC-EEEEEECCCTTCCG-GGGTTT---------------TTCTTEEEEECCTT
T ss_pred CCCeEEEECCCchHHHHHHHHHHHhCCCC-EEEEEecCcccCch-hHHhhh---------------ccCCceEEEEcCCC
Confidence 56899999999999999999999997433 89999987532111 111100 01347899999999
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC--Cc
Q psy7538 109 QLKLGISEIDKKELIDNVDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE--KV 183 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~--~~ 183 (543)
+++ ++..++.++|+|||+||....+ +.....+++|+.|+.+++++|.+.+..++|||+||..+++.. .+
T Consensus 65 d~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~ 138 (336)
T 2hun_A 65 DYE------LVKELVRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGS 138 (336)
T ss_dssp CHH------HHHHHHHTCSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSC
T ss_pred CHH------HHHHHhhCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCC
Confidence 875 7888889999999999986532 345678999999999999999998334799999998766543 35
Q ss_pred ccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCCCC
Q psy7538 184 LEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKEPL 262 (543)
Q Consensus 184 i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~p~ 262 (543)
++|+....|. +.|+.||+.+|++++.+.. .+++++++||+.|||+...+.
T Consensus 139 ~~E~~~~~~~-----------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~ 189 (336)
T 2hun_A 139 FTENDRLMPS-----------------------------SPYSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFPE 189 (336)
T ss_dssp BCTTBCCCCC-----------------------------SHHHHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCTT
T ss_pred cCCCCCCCCC-----------------------------CccHHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcC
Confidence 6665433332 7999999999999998876 689999999999999975420
Q ss_pred CCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHH
Q psy7538 263 PGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEIC 342 (543)
Q Consensus 263 ~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~ 342 (543)
.....++..+..|....+++++++..+++|++|+|++++.++.... .+++||++++ +++|+.|++
T Consensus 190 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~------~g~~~~v~~~--~~~s~~e~~ 254 (336)
T 2hun_A 190 -------KLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKGE------SREIYNISAG--EEKTNLEVV 254 (336)
T ss_dssp -------SHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHCC------TTCEEEECCS--CEECHHHHH
T ss_pred -------chHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCCC------CCCEEEeCCC--CcccHHHHH
Confidence 1122355566677666677888999999999999999999886543 3789999998 889999999
Q ss_pred HHHhhhhcCccC
Q psy7538 343 DIGKDIVTSKIP 354 (543)
Q Consensus 343 ~~i~~~~G~~~p 354 (543)
+.+.+.+|...|
T Consensus 255 ~~i~~~~g~~~~ 266 (336)
T 2hun_A 255 KIILRLMGKGEE 266 (336)
T ss_dssp HHHHHHTTCCST
T ss_pred HHHHHHhCCCcc
Confidence 999999965543
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-34 Score=294.42 Aligned_cols=267 Identities=21% Similarity=0.217 Sum_probs=207.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|||||||||||++|+++|++.|+ +|++++|...+. .++++++.+ .+. .....++.++.+|+
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~--~~~~~~~~~-----~~~----~~~~~~~~~~~~Dl 90 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLDQ---KVVGLDNFATGH--QRNLDEVRS-----LVS----EKQWSNFKFIQGDI 90 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSSCC--HHHHHHHHH-----HSC----HHHHTTEEEEECCT
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCCccc--hhhHHHHhh-----hcc----cccCCceEEEECCC
Confidence 5789999999999999999999999986 899999976432 223322210 000 00024788999999
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC--C
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE--K 182 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~--~ 182 (543)
++++ ++..+++++|+|||+||..... +.....+++|+.|+.+++++|++. ++++|||+||.++++.. .
T Consensus 91 ~d~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~~ 163 (352)
T 1sb8_A 91 RNLD------DCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-KVQSFTYAASSSTYGDHPGL 163 (352)
T ss_dssp TSHH------HHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGGGTTCCCS
T ss_pred CCHH------HHHHHhcCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHHhcCCCCCC
Confidence 9865 7889999999999999976532 456678999999999999999997 88999999999776643 3
Q ss_pred cccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCCC
Q psy7538 183 VLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKEP 261 (543)
Q Consensus 183 ~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~p 261 (543)
+++|+..+.|. +.|+.+|+.+|.+++.++. .+++++++||+.|||+...+
T Consensus 164 ~~~E~~~~~~~-----------------------------~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~ 214 (352)
T 1sb8_A 164 PKVEDTIGKPL-----------------------------SPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDP 214 (352)
T ss_dssp SBCTTCCCCCC-----------------------------SHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCC
T ss_pred CCCCCCCCCCC-----------------------------ChhHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCC
Confidence 56666443333 7999999999999988766 68999999999999997654
Q ss_pred CCCCCCCCCc-hHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHH
Q psy7538 262 LPGWTDNING-PTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQE 340 (543)
Q Consensus 262 ~~gw~d~~~g-~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e 340 (543)
...+ .+ ...++..+..|....+++++++.++++|++|+|++++.++..... ..+++||++++ +++|+.|
T Consensus 215 ~~~~----~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~----~~~~~~ni~~~--~~~s~~e 284 (352)
T 1sb8_A 215 NGAY----AAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLD----ARNQVYNIAVG--GRTSLNQ 284 (352)
T ss_dssp CSTT----CCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGG----GCSEEEEESCS--CCEEHHH
T ss_pred Ccch----hhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcccc----CCCceEEeCCC--CCccHHH
Confidence 2111 11 223556666777666788999999999999999999988876221 14789999998 8999999
Q ss_pred HHHHHhhhh---cCccC
Q psy7538 341 ICDIGKDIV---TSKIP 354 (543)
Q Consensus 341 ~~~~i~~~~---G~~~p 354 (543)
+++.+.+.+ |.+.+
T Consensus 285 ~~~~i~~~~~~~g~~~~ 301 (352)
T 1sb8_A 285 LFFALRDGLAENGVSYH 301 (352)
T ss_dssp HHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHhcCCCCC
Confidence 999999998 76644
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=287.58 Aligned_cols=259 Identities=20% Similarity=0.263 Sum_probs=197.5
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+|+|||||||||||++|+++|++.|+ +|+++.|...... .....+++++.+|+++
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~----------------------~~~~~~~~~~~~D~~~ 55 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDEGL---SVVVVDNLQTGHE----------------------DAITEGAKFYNGDLRD 55 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSSCCG----------------------GGSCTTSEEEECCTTC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCC---EEEEEeCCCcCch----------------------hhcCCCcEEEECCCCC
Confidence 37899999999999999999999986 8899998754321 0111368899999998
Q ss_pred CCCCCCHHHHHHHhc--CccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC--C
Q psy7538 110 LKLGISEIDKKELID--NVDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE--K 182 (543)
Q Consensus 110 ~~lgls~~~~~~l~~--~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~--~ 182 (543)
++ ++..+++ ++|+|||+||..... +.....+++|+.|+.+++++|++. ++++|||+||..+++.. .
T Consensus 56 ~~------~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~~~~~~~ 128 (330)
T 2c20_A 56 KA------FLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEF-KVDKFIFSSTAATYGEVDVD 128 (330)
T ss_dssp HH------HHHHHHHHSCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGGGGCSCSSS
T ss_pred HH------HHHHHHhhcCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHc-CCCEEEEeCCceeeCCCCCC
Confidence 65 7888888 899999999987542 356678999999999999999997 78999999999776543 3
Q ss_pred cccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCCC
Q psy7538 183 VLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKEP 261 (543)
Q Consensus 183 ~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~p 261 (543)
+++|+..+.|. +.|+.+|..+|++++.+.. .+++++++||+.|||+....
T Consensus 129 ~~~E~~~~~~~-----------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~ 179 (330)
T 2c20_A 129 LITEETMTNPT-----------------------------NTYGETKLAIEKMLHWYSQASNLRYKIFRYFNVAGATPNG 179 (330)
T ss_dssp SBCTTSCCCCS-----------------------------SHHHHHHHHHHHHHHHHHHTSSCEEEEEECSEEECCCTTC
T ss_pred CCCcCCCCCCC-----------------------------ChHHHHHHHHHHHHHHHHHHhCCcEEEEecCcccCCCCcC
Confidence 56666443332 8999999999999998876 68999999999999997533
Q ss_pred CCCCCCC-CCchHHHHHHHhc--CceeEEee------cCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCC
Q psy7538 262 LPGWTDN-INGPTGLLIGAGK--GVIRSMYC------KNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNK 332 (543)
Q Consensus 262 ~~gw~d~-~~g~~~~~~~~~~--g~~~~~~~------~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~ 332 (543)
..|.-+. .......+..... +....+++ ++++.+++||++|+|++++.++..... . ..+++||++++
T Consensus 180 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~~~~~~~-~--~~~~~~ni~~~- 255 (330)
T 2c20_A 180 IIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHFLGLKDLQN-G--GESDFYNLGNG- 255 (330)
T ss_dssp SSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHHHHHHHHHHHT-T--CCCEEEECCCT-
T ss_pred ccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHHHHHHHHhcccc-C--CCCCeEEeCCC-
Confidence 2222111 1122223333232 33344555 678899999999999999999876543 1 12679999998
Q ss_pred CCcccHHHHHHHHhhhhcCccC
Q psy7538 333 DYKITWQEICDIGKDIVTSKIP 354 (543)
Q Consensus 333 ~~~~t~~e~~~~i~~~~G~~~p 354 (543)
+++|+.|+++.+.+.+|.+.|
T Consensus 256 -~~~s~~e~~~~i~~~~g~~~~ 276 (330)
T 2c20_A 256 -NGFSVKEIVDAVREVTNHEIP 276 (330)
T ss_dssp -TCBCHHHHHHHHHHHTTSCCC
T ss_pred -CCccHHHHHHHHHHHhCCCCc
Confidence 889999999999999966544
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-34 Score=296.20 Aligned_cols=264 Identities=19% Similarity=0.185 Sum_probs=198.7
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhC-CCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLE-PNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g-~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
.+++|+|||||||||||++|+++|++.| + +|++++|...... +++ . ...+++++.+
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~---~V~~~~r~~~~~~--~~l-----------------~-~~~~v~~~~~ 85 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLELGVN---QVHVVDNLLSAEK--INV-----------------P-DHPAVRFSET 85 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCS---EEEEECCCTTCCG--GGS-----------------C-CCTTEEEECS
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHHcCCc---eEEEEECCCCCch--hhc-----------------c-CCCceEEEEC
Confidence 4678999999999999999999999998 6 8999999764321 000 0 1357899999
Q ss_pred cCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCC
Q psy7538 106 DITQLKLGISEIDKKELIDNVDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEK 182 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~ 182 (543)
|+++++ ++..+++++|+|||+||..... +.....+++|+.|+.+++++|++.+++++|||+||..+++...
T Consensus 86 Dl~d~~------~l~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~ 159 (377)
T 2q1s_A 86 SITDDA------LLASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKT 159 (377)
T ss_dssp CTTCHH------HHHHCCSCCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC-------
T ss_pred CCCCHH------HHHHHhhCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCC
Confidence 999875 7888999999999999987543 3566789999999999999998864688999999997765432
Q ss_pred --ccc--ccccCCCC-ChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeee
Q psy7538 183 --VLE--ERTYLPPD-DPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVP 256 (543)
Q Consensus 183 --~i~--E~~y~~p~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G 256 (543)
+++ |+.+..|. .| .+.|+.+|+.+|+++..+.. .+++++++||+.|||
T Consensus 160 ~~~~~~~E~~~~~~~~~~--------------------------~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G 213 (377)
T 2q1s_A 160 FDDAKATEETDIVSLHNN--------------------------DSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYG 213 (377)
T ss_dssp -------CCCCCCCSSCC--------------------------CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEC
T ss_pred CCCcCcccccccccccCC--------------------------CCchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEEC
Confidence 455 54321011 11 17999999999999998766 689999999999999
Q ss_pred cCCCCCCC-CCCCC-----CchHHHHHHHhcCceeEEeecCCcccccchHHHHHHH-HHHHhhhhcccCCCCCCcEEEee
Q psy7538 257 IYKEPLPG-WTDNI-----NGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAING-VFLFTWDFLNSKESERKSVCNLT 329 (543)
Q Consensus 257 ~~~~p~~g-w~d~~-----~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a-~i~a~~~~~~~~~~~~~~vyni~ 329 (543)
+...+.+| |.... .....++..+..|....+++++++.+++||++|+|++ ++.++..... + +||++
T Consensus 214 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~~------g-~~~i~ 286 (377)
T 2q1s_A 214 PGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDVANGLIACAADGTPG------G-VYNIA 286 (377)
T ss_dssp TTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHCCTT------E-EEECC
T ss_pred CCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhcCCC------C-eEEec
Confidence 97632222 21110 1123456667777766667888999999999999999 8888876432 6 99999
Q ss_pred cCCCCcccHHHHHHHHhhhhcCccC
Q psy7538 330 SNKDYKITWQEICDIGKDIVTSKIP 354 (543)
Q Consensus 330 s~~~~~~t~~e~~~~i~~~~G~~~p 354 (543)
++ +++|+.|+++.+.+.+|.+.+
T Consensus 287 ~~--~~~s~~e~~~~i~~~~g~~~~ 309 (377)
T 2q1s_A 287 SG--KETSIADLATKINEITGNNTE 309 (377)
T ss_dssp CC--CCEEHHHHHHHHHHHHTCCSC
T ss_pred CC--CceeHHHHHHHHHHHhCCCCC
Confidence 98 899999999999999966544
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-33 Score=292.74 Aligned_cols=255 Identities=19% Similarity=0.216 Sum_probs=200.6
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
++|+|||||||||||++|+++|++.|+ +|++++|...... .....++.++.+|++
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~----------------------~~~~~~v~~~~~Dl~ 82 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGH---YVIASDWKKNEHM----------------------TEDMFCDEFHLVDLR 82 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCCSSS----------------------CGGGTCSEEEECCTT
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCC---eEEEEECCCccch----------------------hhccCCceEEECCCC
Confidence 578999999999999999999999986 8999999864321 111246889999999
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCccCCC----cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC---
Q psy7538 109 QLKLGISEIDKKELIDNVDIVYHVAATIRF----DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE--- 181 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~vd~ViH~AA~v~~----~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~--- 181 (543)
+++ ++..+++++|+|||+||.... .+.....+++|+.|+.+++++|++. ++++|||+||..+++..
T Consensus 83 d~~------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~~~~V~~SS~~v~~~~~~~ 155 (379)
T 2c5a_A 83 VME------NCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARIN-GIKRFFYASSACIYPEFKQL 155 (379)
T ss_dssp SHH------HHHHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEEEGGGSCGGGSS
T ss_pred CHH------HHHHHhCCCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEeehheeCCCCCC
Confidence 875 788999999999999997654 3557788999999999999999997 88999999999776532
Q ss_pred ----CcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeee
Q psy7538 182 ----KVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVP 256 (543)
Q Consensus 182 ----~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G 256 (543)
.+++|+... |. ...+.|+.+|+.+|++++.+.. .+++++++||+.|||
T Consensus 156 ~~~~~~~~E~~~~-~~--------------------------~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G 208 (379)
T 2c5a_A 156 ETTNVSLKESDAW-PA--------------------------EPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYG 208 (379)
T ss_dssp SSSSCEECGGGGS-SB--------------------------CCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEEC
T ss_pred CccCCCcCcccCC-CC--------------------------CCCChhHHHHHHHHHHHHHHHHHHCCCEEEEEeCceeC
Confidence 124444210 00 1127999999999999988766 689999999999999
Q ss_pred cCCCCCCCCCCCCCchHHHHHHHhcCce-eEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCc
Q psy7538 257 IYKEPLPGWTDNINGPTGLLIGAGKGVI-RSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYK 335 (543)
Q Consensus 257 ~~~~p~~gw~d~~~g~~~~~~~~~~g~~-~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~ 335 (543)
+...+..++. .....++..+..|.. ..+++++++.+++||++|+|++++.++... . +++||++++ ++
T Consensus 209 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~-~------~~~~ni~~~--~~ 276 (379)
T 2c5a_A 209 PFGTWKGGRE---KAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD-F------REPVNIGSD--EM 276 (379)
T ss_dssp TTSCCSSSCC---CHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS-C------CSCEEECCC--CC
T ss_pred cCCCcccccc---cHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHhhcc-C------CCeEEeCCC--Cc
Confidence 9765432211 122345666656654 556788899999999999999999988754 2 569999998 89
Q ss_pred ccHHHHHHHHhhhhcCccC
Q psy7538 336 ITWQEICDIGKDIVTSKIP 354 (543)
Q Consensus 336 ~t~~e~~~~i~~~~G~~~p 354 (543)
+|+.|+++.+.+.+|.+.+
T Consensus 277 ~s~~e~~~~i~~~~g~~~~ 295 (379)
T 2c5a_A 277 VSMNEMAEMVLSFEEKKLP 295 (379)
T ss_dssp EEHHHHHHHHHHTTTCCCC
T ss_pred cCHHHHHHHHHHHhCCCCc
Confidence 9999999999999965433
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-33 Score=290.63 Aligned_cols=266 Identities=17% Similarity=0.152 Sum_probs=198.9
Q ss_pred hhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 26 KTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 26 ~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
+++++|+|||||||||||++|+++|++.|+ +|++++|+...... +.+ .+ ....++.++.+
T Consensus 5 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~---~~~--------~~------~~~~~~~~~~~ 64 (357)
T 1rkx_A 5 SFWQGKRVFVTGHTGFKGGWLSLWLQTMGA---TVKGYSLTAPTVPS---LFE--------TA------RVADGMQSEIG 64 (357)
T ss_dssp HHHTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCSSSSC---HHH--------HT------TTTTTSEEEEC
T ss_pred hhhCCCEEEEECCCchHHHHHHHHHHhCCC---eEEEEeCCCcccch---hhH--------hh------ccCCceEEEEc
Confidence 467899999999999999999999999986 89999997644211 110 00 01247889999
Q ss_pred cCCCCCCCCCHHHHHHHhcC--ccEEEEcCccCCC---cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccC
Q psy7538 106 DITQLKLGISEIDKKELIDN--VDIVYHVAATIRF---DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPS 180 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~~--vd~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~ 180 (543)
|+++++ ++..++++ +|+|||+||.... .+.....+++|+.|+.+++++|++++++++|||+||.++++.
T Consensus 65 Dl~d~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~ 138 (357)
T 1rkx_A 65 DIRDQN------KLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDN 138 (357)
T ss_dssp CTTCHH------HHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCC
T ss_pred cccCHH------HHHHHHHhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCC
Confidence 999875 78888875 8999999996432 244567899999999999999999844899999999977765
Q ss_pred CC---cccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-c---------CCcEE
Q psy7538 181 EK---VLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-L---------GMPCM 247 (543)
Q Consensus 181 ~~---~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~---------~lp~~ 247 (543)
.. +++|+....|. +.|+.||+.+|++++.+.. . +++++
T Consensus 139 ~~~~~~~~E~~~~~~~-----------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~ 189 (357)
T 1rkx_A 139 KEWIWGYRENEAMGGY-----------------------------DPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVA 189 (357)
T ss_dssp CCSSSCBCTTSCBCCS-----------------------------SHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEE
T ss_pred CCcCCCCCCCCCCCCC-----------------------------CccHHHHHHHHHHHHHHHHHHhhhhccccCCceEE
Confidence 43 45554322222 7999999999999988754 2 89999
Q ss_pred EEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEE
Q psy7538 248 ILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCN 327 (543)
Q Consensus 248 IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyn 327 (543)
++||+.|||+...+.. .....++..+..|.... .++++..+++|||+|+|++++.++..... .....+++||
T Consensus 190 ~lrp~~v~G~~~~~~~------~~~~~~~~~~~~g~~~~-~~~~~~~~~~v~v~Dva~a~~~~~~~~~~-~~~~~~~~~n 261 (357)
T 1rkx_A 190 TVRAGNVIGGGDWALD------RIVPDILRAFEQSQPVI-IRNPHAIRPWQHVLEPLSGYLLLAQKLYT-DGAEYAEGWN 261 (357)
T ss_dssp EEECCCEECTTCCCSS------CHHHHHHHHHHTTCCEE-CSCTTCEECCEETHHHHHHHHHHHHHHHH-TCGGGCSEEE
T ss_pred EEeeceeeCCCCCccc------cHHHHHHHHHhcCCCEE-ECCCCCeeccEeHHHHHHHHHHHHHhhhh-cCCCCCceEE
Confidence 9999999998653210 11234556666676554 34678899999999999999988875210 0001367999
Q ss_pred eecCCCCcccHHHHHHHHhhhhcCccC
Q psy7538 328 LTSNKDYKITWQEICDIGKDIVTSKIP 354 (543)
Q Consensus 328 i~s~~~~~~t~~e~~~~i~~~~G~~~p 354 (543)
++++..+++|+.|+++.+.+.+|.+.+
T Consensus 262 i~~~~~~~~s~~e~~~~i~~~~g~~~~ 288 (357)
T 1rkx_A 262 FGPNDADATPVKNIVEQMVKYWGEGAS 288 (357)
T ss_dssp CCCCGGGCEEHHHHHHHHHHHHCTTCC
T ss_pred ECCCCCCcccHHHHHHHHHHHhCCCCc
Confidence 997522689999999999999965433
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-33 Score=291.94 Aligned_cols=321 Identities=13% Similarity=0.164 Sum_probs=218.4
Q ss_pred CCEEEEEcCcchhHHHHHHHHH-hhCCCcCEEEEEecCCCCCC------HHHHHHHHhcCchhHHHHhhcCcC-CCCc--
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKIL-RLEPNVKKIYLLMRTKKGKT------PNQRVEELFESPVFDALKTLRGKS-ILQK-- 99 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll-~~g~~v~~V~~l~R~~~~~~------~~~rl~~~~~~~~f~~l~~~~~~~-~~~~-- 99 (543)
+|+|||||||||||++|+++|+ +.|+ +|+++.|...... ..+++.+.++ ... .. ...+
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--------~~~-~~~~~~~~~ 69 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTNH---SVVIVDSLVGTHGKSDHVETRENVARKLQ--------QSD-GPKPPWADR 69 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCC---EEEEEECCTTTTTCCTTSCCHHHHHHHHH--------HSC-SSCCTTTTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCCC---EEEEEecCCcccccccccchHHHHHHHHH--------Hhh-ccccccCCc
Confidence 5899999999999999999999 9886 8899998764320 0223322111 000 00 0123
Q ss_pred -eEEEEccCCCCCCCCCHHHHHHHhc--C-ccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEE
Q psy7538 100 -IQVISGDITQLKLGISEIDKKELID--N-VDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYI 172 (543)
Q Consensus 100 -v~~i~gDl~~~~lgls~~~~~~l~~--~-vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~v 172 (543)
+.++.+|+++++ ++..+++ + +|+|||+||..... +.....+++|+.|+.+++++|++. ++++|||+
T Consensus 70 ~~~~~~~Dl~d~~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~~~iv~~ 142 (397)
T 1gy8_A 70 YAALEVGDVRNED------FLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH-KCDKIIFS 142 (397)
T ss_dssp CCEEEESCTTCHH------HHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEE
T ss_pred eEEEEECCCCCHH------HHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHh-CCCEEEEE
Confidence 889999999875 6888877 6 99999999987642 456678999999999999999997 78999999
Q ss_pred ecCccccCC---------CcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-c
Q psy7538 173 STAYCHPSE---------KVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-L 242 (543)
Q Consensus 173 ST~y~~~~~---------~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~ 242 (543)
||+.+++.. .+++|+..+.|. +.|+.||+.+|++++.+.. .
T Consensus 143 SS~~v~g~~~~~~~~~~~~~~~E~~~~~p~-----------------------------~~Y~~sK~~~e~~~~~~~~~~ 193 (397)
T 1gy8_A 143 SSAAIFGNPTMGSVSTNAEPIDINAKKSPE-----------------------------SPYGESKLIAERMIRDCAEAY 193 (397)
T ss_dssp EEGGGTBSCCC-----CCCCBCTTSCCBCS-----------------------------SHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHhCCCCcccccccccCcCccCCCCCC-----------------------------CchHHHHHHHHHHHHHHHHHH
Confidence 999766532 244554322222 7999999999999998876 6
Q ss_pred CCcEEEEecCeeeecCCCCCCCCCCC-CCchHHHHH-----HHhcCc------------eeEEee------cCCcccccc
Q psy7538 243 GMPCMILRPSIVVPIYKEPLPGWTDN-INGPTGLLI-----GAGKGV------------IRSMYC------KNTGMADFL 298 (543)
Q Consensus 243 ~lp~~IlRps~V~G~~~~p~~gw~d~-~~g~~~~~~-----~~~~g~------------~~~~~~------~~~~~~d~V 298 (543)
+++++++||+.|||+......|+.++ .......+. .+..|. ...+++ ++++.+++|
T Consensus 194 gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v 273 (397)
T 1gy8_A 194 GIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYV 273 (397)
T ss_dssp CCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEE
T ss_pred CCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHhcCccccccccccCCCceeecCcccCCCCCeeEeeE
Confidence 89999999999999976543333221 122222333 444553 234555 678899999
Q ss_pred hHHHHHHHHHHHhhhhcccCC-CCCC---cEEEeecCCCCcccHHHHHHHHhhhhcCccCCCCccccCccccccchhHHH
Q psy7538 299 PADVAINGVFLFTWDFLNSKE-SERK---SVCNLTSNKDYKITWQEICDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHF 374 (543)
Q Consensus 299 ~vddva~a~i~a~~~~~~~~~-~~~~---~vyni~s~~~~~~t~~e~~~~i~~~~G~~~p~~~~~~~p~~~~~~~~~~~~ 374 (543)
||+|+|++++.++..... .. ...+ ++||++++ +++|+.|+++.+.+.+|.+.|.......+... ...
T Consensus 274 ~v~Dva~a~~~~l~~~~~-~~~~~~~~~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~--~~~---- 344 (397)
T 1gy8_A 274 HVCDLASAHILALDYVEK-LGPNDKSKYFSVFNLGTS--RGYSVREVIEVARKTTGHPIPVRECGRREGDP--AYL---- 344 (397)
T ss_dssp EHHHHHHHHHHHHHHHHT-CCTTTGGGSEEEEEESCS--CCEEHHHHHHHHHHHHCCCCCEEEECCCTTCC--SEE----
T ss_pred eHHHHHHHHHHHHhcccc-cccccccCCCcEEEeCCC--CcccHHHHHHHHHHHhCCCCCeeeCCCCCCcc--ccc----
Confidence 999999999999876542 10 0013 79999988 88999999999999996554322111111000 000
Q ss_pred HHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHhhcccccccc
Q psy7538 375 ICCLLFHWIPAYFLDAVILISGNKPCLVRIQERIHRGFDVFEYYAN 420 (543)
Q Consensus 375 ~~~~~~~~~p~~~~d~~~~~~G~kP~~~~~~~~l~~~~~~~~~f~~ 420 (543)
....+.+.+.+||+|+...+.+.+.+ +++||..
T Consensus 345 ----------~~d~~k~~~~lG~~p~~~~l~e~l~~---~~~~~~~ 377 (397)
T 1gy8_A 345 ----------VAASDKAREVLGWKPKYDTLEAIMET---SWKFQRT 377 (397)
T ss_dssp ----------CBCCHHHHHHTCCCCSCCSHHHHHHH---HHHHHHT
T ss_pred ----------ccCHHHHHHHhCCCCCcCCHHHHHHH---HHHHHHh
Confidence 01134456789999987344444444 3445543
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-33 Score=286.12 Aligned_cols=298 Identities=16% Similarity=0.194 Sum_probs=215.4
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+|+|||||||||||++|+++|++.|++. +|++++|....... ++++ .....++.++.+|+++
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~-~~~~----------------~~~~~~~~~~~~Dl~d 65 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDV-HVTVLDKLTYAGNK-ANLE----------------AILGDRVELVVGDIAD 65 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTC-EEEEEECCCTTCCG-GGTG----------------GGCSSSEEEEECCTTC
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCC-EEEEEeCCCCCCCh-hHHh----------------hhccCCeEEEECCCCC
Confidence 4799999999999999999999993322 89999997532111 1110 0012578999999998
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC-----
Q psy7538 110 LKLGISEIDKKELIDNVDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE----- 181 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~----- 181 (543)
++ ++..+++++|+|||+||....+ +.....+++|+.|+.+++++|.+. ++ +|||+||..+++..
T Consensus 66 ~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~-~~v~~SS~~vyg~~~~~~~ 137 (348)
T 1oc2_A 66 AE------LVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY-DI-RFHHVSTDEVYGDLPLRED 137 (348)
T ss_dssp HH------HHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGGGCCBCCGGG
T ss_pred HH------HHHHHhhcCCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHh-CC-eEEEecccceeCCCccccc
Confidence 75 7899999999999999987532 345678999999999999999998 66 99999998766543
Q ss_pred ---------CcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEec
Q psy7538 182 ---------KVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRP 251 (543)
Q Consensus 182 ---------~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRp 251 (543)
.+++|+....| .+.|+.||+.+|++++.+.. .+++++++||
T Consensus 138 ~~~~~~~~~~~~~E~~~~~~-----------------------------~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp 188 (348)
T 1oc2_A 138 LPGHGEGPGEKFTAETNYNP-----------------------------SSPYSSTKAASDLIVKAWVRSFGVKATISNC 188 (348)
T ss_dssp STTTTCSTTSSBCTTSCCCC-----------------------------CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred ccccccccCCCcCCCCCCCC-----------------------------CCccHHHHHHHHHHHHHHHHHhCCCEEEEee
Confidence 23444322222 27999999999999998776 6899999999
Q ss_pred CeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecC
Q psy7538 252 SIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSN 331 (543)
Q Consensus 252 s~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~ 331 (543)
+.|||+...+. .....++..+..|....++++++..++++|++|+|++++.++.... .+++||++++
T Consensus 189 ~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~------~g~~~~i~~~ 255 (348)
T 1oc2_A 189 SNNYGPYQHIE-------KFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGR------MGETYLIGAD 255 (348)
T ss_dssp CCEESTTCCTT-------SHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHHCC------TTCEEEECCS
T ss_pred ceeeCCCCCcc-------chHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHHHHhhCCC------CCCeEEeCCC
Confidence 99999975420 1122355666677666677888999999999999999999886543 3789999998
Q ss_pred CCCcccHHHHHHHHhhhhcCccCCCCccccCccccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHh
Q psy7538 332 KDYKITWQEICDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFICCLLFHWIPAYFLDAVILISGNKPCLVRIQERIHRG 411 (543)
Q Consensus 332 ~~~~~t~~e~~~~i~~~~G~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~d~~~~~~G~kP~~~~~~~~l~~~ 411 (543)
.++|+.|+++.+.+.+|.+.+.. .+.+........+ ....+.+.+.+||+|+...+.+.+.+.
T Consensus 256 --~~~s~~e~~~~i~~~~g~~~~~~--~~~~~~~~~~~~~-------------~~d~~k~~~~lG~~p~~~~~~~~l~~~ 318 (348)
T 1oc2_A 256 --GEKNNKEVLELILEKMGQPKDAY--DHVTDRAGHDLRY-------------AIDASKLRDELGWTPQFTDFSEGLEET 318 (348)
T ss_dssp --CEEEHHHHHHHHHHHTTCCTTCS--EEECCCTTCCCBC-------------CBCCHHHHHHHCCCCSCCCHHHHHHHH
T ss_pred --CCCCHHHHHHHHHHHhCCCcccc--ccCCCCCCccccc-------------ccCHHHHHHHcCCCCCCCcHHHHHHHH
Confidence 89999999999999996553311 1111100000000 011344567799999864455555553
Q ss_pred h
Q psy7538 412 F 412 (543)
Q Consensus 412 ~ 412 (543)
+
T Consensus 319 ~ 319 (348)
T 1oc2_A 319 I 319 (348)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-33 Score=283.52 Aligned_cols=256 Identities=18% Similarity=0.232 Sum_probs=199.4
Q ss_pred CEEEEEcCcchhHHHHHHHHHhh-CCCc--CEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRL-EPNV--KKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~-g~~v--~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
|+|||||||||||++|+++|++. ++++ .+|+++.|....... ++++++ ....++.++.+|+
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~-~~~~~~---------------~~~~~~~~~~~Dl 64 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR-ANLAPV---------------DADPRLRFVHGDI 64 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG-GGGGGG---------------TTCTTEEEEECCT
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCch-hhhhhc---------------ccCCCeEEEEcCC
Confidence 68999999999999999999996 3331 289999997532111 111110 0124789999999
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC--C
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE--K 182 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~--~ 182 (543)
++++ ++..++.++|+|||+||....+ +..+..+++|+.|+.+++++|++. ++++|||+||..+++.. .
T Consensus 65 ~d~~------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~-~~~~~v~~SS~~vyg~~~~~ 137 (337)
T 1r6d_A 65 RDAG------LLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-GVGRVVHVSTNQVYGSIDSG 137 (337)
T ss_dssp TCHH------HHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGGGGCCCSSS
T ss_pred CCHH------HHHHHhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEecchHHhCCCCCC
Confidence 9875 7888889999999999976532 345678999999999999999998 78999999998766543 3
Q ss_pred cccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCCC
Q psy7538 183 VLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKEP 261 (543)
Q Consensus 183 ~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~p 261 (543)
+++|+....|. +.|+.||+.+|++++.+.. .+++++++||+.|||+...+
T Consensus 138 ~~~E~~~~~~~-----------------------------~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~ 188 (337)
T 1r6d_A 138 SWTESSPLEPN-----------------------------SPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHP 188 (337)
T ss_dssp CBCTTSCCCCC-----------------------------SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCT
T ss_pred CCCCCCCCCCC-----------------------------CchHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCC
Confidence 56665433222 7999999999999988776 68999999999999997542
Q ss_pred CCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHH
Q psy7538 262 LPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEI 341 (543)
Q Consensus 262 ~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~ 341 (543)
. .....++..+..|....+++++++.++++|++|+|++++.++.... .+++||++++ +++|+.|+
T Consensus 189 ~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~------~g~~~~v~~~--~~~s~~e~ 253 (337)
T 1r6d_A 189 E-------KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR------AGEIYHIGGG--LELTNREL 253 (337)
T ss_dssp T-------SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC------TTCEEEECCC--CEEEHHHH
T ss_pred C-------ChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCCC------CCCEEEeCCC--CCccHHHH
Confidence 0 1122355666677666677888999999999999999999887543 3789999998 89999999
Q ss_pred HHHHhhhhcCcc
Q psy7538 342 CDIGKDIVTSKI 353 (543)
Q Consensus 342 ~~~i~~~~G~~~ 353 (543)
++.+.+.+|.+.
T Consensus 254 ~~~i~~~~g~~~ 265 (337)
T 1r6d_A 254 TGILLDSLGADW 265 (337)
T ss_dssp HHHHHHHHTCCG
T ss_pred HHHHHHHhCCCc
Confidence 999999996543
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-33 Score=287.22 Aligned_cols=275 Identities=19% Similarity=0.226 Sum_probs=194.4
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|||||||||||++|+++|++.|+ +|++++|..... ..+.++.+ . . ..++.++.+|++++
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~-~~~~~~~l---------~-----~-~~~~~~~~~Dl~d~ 62 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGI---DLIVFDNLSRKG-ATDNLHWL---------S-----S-LGNFEFVHGDIRNK 62 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCCSTT-HHHHHHHH---------H-----T-TCCCEEEECCTTCH
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCC---EEEEEeCCCccC-chhhhhhh---------c-----c-CCceEEEEcCCCCH
Confidence 6899999999999999999999986 889999854221 11222221 1 1 13688999999987
Q ss_pred CCCCCHHHHHHHhcC--ccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhccCCc-eEEEEecCccccCCC--
Q psy7538 111 KLGISEIDKKELIDN--VDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMKNLK-CFTYISTAYCHPSEK-- 182 (543)
Q Consensus 111 ~lgls~~~~~~l~~~--vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~-~~V~vST~y~~~~~~-- 182 (543)
+ ++..++++ +|+|||+||....+ +.....+++|+.|+.+++++|++. +++ +|||+||.++++...
T Consensus 63 ~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~~~~iv~~SS~~v~g~~~~~ 135 (347)
T 1orr_A 63 N------DVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQY-NSNCNIIYSSTNKVYGDLEQY 135 (347)
T ss_dssp H------HHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEEEEGGGGTTCTTS
T ss_pred H------HHHHHHhccCCCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEeccHHHhCCCCcC
Confidence 5 78888887 99999999986542 356678999999999999999997 665 999999997765432
Q ss_pred cccccc--cCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCC
Q psy7538 183 VLEERT--YLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYK 259 (543)
Q Consensus 183 ~i~E~~--y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~ 259 (543)
+..|+. +..+..+ ..+++..| ....+.|+.||+.+|++++.+.. .+++++++||+.|||+..
T Consensus 136 ~~~e~~~~~~~~~~~------------~~~~e~~~---~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~ 200 (347)
T 1orr_A 136 KYNETETRYTCVDKP------------NGYDESTQ---LDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQ 200 (347)
T ss_dssp CEEECSSCEEETTCT------------TCBCTTSC---CCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTC
T ss_pred Ccccccccccccccc------------cCccccCC---CCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCC
Confidence 222210 0000000 00000000 01227999999999999998776 689999999999999976
Q ss_pred CCCCCCCCCCCchHHHHHHHhcCc-----eeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCC
Q psy7538 260 EPLPGWTDNINGPTGLLIGAGKGV-----IRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDY 334 (543)
Q Consensus 260 ~p~~gw~d~~~g~~~~~~~~~~g~-----~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~ 334 (543)
.+.. +. .....++..+..|. ...+++++++.+++|+++|+|++++.++..... ..+++||++++..+
T Consensus 201 ~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~----~~g~~~~v~~~~~~ 272 (347)
T 1orr_A 201 FATY---DQ-GWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANVSK----IRGNAFNIGGTIVN 272 (347)
T ss_dssp CCBT---TB-CHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHTHHH----HTTCEEEESSCGGG
T ss_pred CCCC---cC-cHHHHHHHHHHhCcccCCCCeEEecCCcceEeeEEHHHHHHHHHHHHhcccc----CCCCEEEeCCCCCC
Confidence 4311 00 01123444444444 455678899999999999999999998875221 13779999987223
Q ss_pred cccHHHHHHHHhhhhcCccC
Q psy7538 335 KITWQEICDIGKDIVTSKIP 354 (543)
Q Consensus 335 ~~t~~e~~~~i~~~~G~~~p 354 (543)
++|+.|+++.+.+.+|.+.+
T Consensus 273 ~~s~~e~~~~i~~~~g~~~~ 292 (347)
T 1orr_A 273 SLSLLELFKLLEDYCNIDMR 292 (347)
T ss_dssp EEEHHHHHHHHHHHHTCCCC
T ss_pred CccHHHHHHHHHHHhCCCCC
Confidence 59999999999999965533
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-33 Score=285.51 Aligned_cols=269 Identities=15% Similarity=0.152 Sum_probs=196.1
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCC----CCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKG----KTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~----~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
+|+|||||||||||++|+++|++.|+ +|+++.|.... ....+.++.+ ... ...++.++.+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~r~~~~~~~~~~~l---------~~~----~~~~~~~~~~ 65 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGY---LPVVIDNFHNAFRGGGSLPESLRRV---------QEL----TGRSVEFEEM 65 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTC---CEEEEECSSSSCBCSSSSBHHHHHH---------HHH----HTCCCEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEecCCcccccccccHHHHHHH---------Hhc----cCCceEEEEC
Confidence 57999999999999999999999987 78889886543 0011222211 100 1136789999
Q ss_pred cCCCCCCCCCHHHHHHHhc--CccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccC
Q psy7538 106 DITQLKLGISEIDKKELID--NVDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPS 180 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~--~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~ 180 (543)
|+++++ ++..+++ ++|+|||+||..... +.....+++|+.|+.+++++|++. ++++|||+||..+++.
T Consensus 66 D~~~~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~~~g~ 138 (348)
T 1ek6_A 66 DILDQG------ALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH-GVKNLVFSSSATVYGN 138 (348)
T ss_dssp CTTCHH------HHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGGCS
T ss_pred CCCCHH------HHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHh-CCCEEEEECcHHHhCC
Confidence 999865 7888887 899999999976532 445678999999999999999997 7899999999977654
Q ss_pred --CCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh--cCCcEEEEecCeeee
Q psy7538 181 --EKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME--LGMPCMILRPSIVVP 256 (543)
Q Consensus 181 --~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~--~~lp~~IlRps~V~G 256 (543)
..+++|+..+.| ..+.|+.||+.+|++++.+.. .+++++++||+.|||
T Consensus 139 ~~~~~~~E~~~~~p----------------------------~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G 190 (348)
T 1ek6_A 139 PQYLPLDEAHPTGG----------------------------CTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTG 190 (348)
T ss_dssp CSSSSBCTTSCCCC----------------------------CSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEEC
T ss_pred CCCCCcCCCCCCCC----------------------------CCCchHHHHHHHHHHHHHHHhcCCCcceEEEeeccccC
Confidence 335666543322 017999999999999988764 249999999999999
Q ss_pred cCCCCCCCCCCC--CCchHHHHHHH-h-cCceeEEee------cCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 257 IYKEPLPGWTDN--INGPTGLLIGA-G-KGVIRSMYC------KNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 257 ~~~~p~~gw~d~--~~g~~~~~~~~-~-~g~~~~~~~------~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
+......|.... .......+... . .+....+++ ++++.+++||++|+|++++.++..... . ..+++|
T Consensus 191 ~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~-~--~g~~~~ 267 (348)
T 1ek6_A 191 AHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKE-Q--CGCRIY 267 (348)
T ss_dssp CCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTT-T--CCEEEE
T ss_pred CCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCceEEeeEEHHHHHHHHHHHHhcccc-c--CCceEE
Confidence 864322221111 01122223332 2 454445565 678899999999999999999876531 0 113799
Q ss_pred EeecCCCCcccHHHHHHHHhhhhcCccC
Q psy7538 327 NLTSNKDYKITWQEICDIGKDIVTSKIP 354 (543)
Q Consensus 327 ni~s~~~~~~t~~e~~~~i~~~~G~~~p 354 (543)
|++++ +++|+.|+++.+.+.+|.+.|
T Consensus 268 ni~~~--~~~s~~e~~~~i~~~~g~~~~ 293 (348)
T 1ek6_A 268 NLGTG--TGYSVLQMVQAMEKASGKKIP 293 (348)
T ss_dssp EECCS--CCEEHHHHHHHHHHHHCSCCC
T ss_pred EeCCC--CCccHHHHHHHHHHHhCCCCc
Confidence 99998 889999999999999965543
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-32 Score=281.85 Aligned_cols=264 Identities=15% Similarity=0.111 Sum_probs=199.2
Q ss_pred CEEEEEcCcchhHHHHHHHHHhh-CCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRL-EPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~-g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
|+|||||||||||++|+++|++. |+ +|++++|+..... . .....++.++.+|+++
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~---~V~~~~r~~~~~~------~---------------~~~~~~~~~~~~D~~~ 56 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHY---EVYGLDIGSDAIS------R---------------FLNHPHFHFVEGDISI 56 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTC---EEEEEESCCGGGG------G---------------GTTCTTEEEEECCTTT
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCC---EEEEEeCCcchHH------H---------------hhcCCCeEEEeccccC
Confidence 68999999999999999999998 65 8999999753210 0 0112478999999998
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCccCCC---cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC--Ccc
Q psy7538 110 LKLGISEIDKKELIDNVDIVYHVAATIRF---DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE--KVL 184 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~--~~i 184 (543)
+. +.++.+++++|+|||+||.... .......+++|+.|+.+++++|++. + ++|||+||+.+++.. .++
T Consensus 57 ~~-----~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~v~~SS~~v~g~~~~~~~ 129 (345)
T 2bll_A 57 HS-----EWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFPSTSEVYGMCSDKYF 129 (345)
T ss_dssp CS-----HHHHHHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEECCGGGGBTCCCSSB
T ss_pred cH-----HHHHhhccCCCEEEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHh-C-CeEEEEecHHHcCCCCCCCc
Confidence 53 3577788899999999997653 2455678999999999999999997 5 899999999776543 346
Q ss_pred cccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCCCCC
Q psy7538 185 EERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKEPLP 263 (543)
Q Consensus 185 ~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~p~~ 263 (543)
+|+..+.+..|. ....+.|+.+|+.+|+++..+.. .+++++++||+.|||+...+..
T Consensus 130 ~e~~~~~~~~~~----------------------~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~ 187 (345)
T 2bll_A 130 DEDHSNLIVGPV----------------------NKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLN 187 (345)
T ss_dssp CTTTCCCBCCCT----------------------TCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTT
T ss_pred CCcccccccCcc----------------------cCcccccHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCccccc
Confidence 665432111100 00116899999999999988766 6899999999999999865422
Q ss_pred CCCCCCC-chHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCC-cccHHHH
Q psy7538 264 GWTDNIN-GPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDY-KITWQEI 341 (543)
Q Consensus 264 gw~d~~~-g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~-~~t~~e~ 341 (543)
.+..+.. ....++..+..|....+++++++.+++||++|+|++++.++..... . ..+++||++++ + ++|+.|+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~-~--~~g~~~~i~~~--~~~~s~~e~ 262 (345)
T 2bll_A 188 AARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGN-R--CDGEIINIGNP--ENEASIEEL 262 (345)
T ss_dssp CSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGG-T--TTTEEEEECCT--TSEEEHHHH
T ss_pred ccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHHHHHhhccc-c--CCCceEEeCCC--CCCCCHHHH
Confidence 1111111 1234566667777766788889999999999999999999876531 0 13789999987 6 8999999
Q ss_pred HHHHhhhhcCc
Q psy7538 342 CDIGKDIVTSK 352 (543)
Q Consensus 342 ~~~i~~~~G~~ 352 (543)
++.+.+.+|..
T Consensus 263 ~~~i~~~~g~~ 273 (345)
T 2bll_A 263 GEMLLASFEKH 273 (345)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHhCCC
Confidence 99999998654
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-34 Score=307.18 Aligned_cols=299 Identities=21% Similarity=0.322 Sum_probs=215.0
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCc-CEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNV-KKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v-~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
..++|+|||||||||||++|+++|++.++ + .+|++++|++......+|+++.+...-.+.+.... .....++.++.+
T Consensus 70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~-~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~v~~v~~ 147 (478)
T 4dqv_A 70 SPELRTVLLTGATGFLGRYLVLELLRRLD-VDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFK-ELAADRLEVVAG 147 (478)
T ss_dssp CSCCCEEEEECTTSHHHHHHHHHHHHHSC-TTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHH-HHHTTTEEEEEC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHhcCC-CCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhh-hhccCceEEEEe
Confidence 35689999999999999999999999922 1 38999999987666667777666542222222111 223468999999
Q ss_pred cCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC--Cc
Q psy7538 106 DITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE--KV 183 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~--~~ 183 (543)
|++++++|++.+++..+++++|+|||+||.+++ .++...+++|+.||.+++++|++. ++++|||+||.++++.. ..
T Consensus 148 Dl~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~Nv~gt~~ll~aa~~~-~~~~~V~iSS~~v~~~~~~~~ 225 (478)
T 4dqv_A 148 DKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNA-FPYHELFGPNVAGTAELIRIALTT-KLKPFTYVSTADVGAAIEPSA 225 (478)
T ss_dssp CTTSGGGGCCHHHHHHHHHHCCEEEECCSSCSB-SSCCEEHHHHHHHHHHHHHHHTSS-SCCCEEEEEEGGGGTTSCTTT
T ss_pred ECCCcccCCCHHHHHHHHcCCCEEEECccccCC-cCHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEeehhhcCccCCCC
Confidence 999999999999999999999999999999887 666678899999999999999997 88999999998776542 23
Q ss_pred ccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCCCC
Q psy7538 184 LEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKEPL 262 (543)
Q Consensus 184 i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~p~ 262 (543)
++|+....|.+ .+......+++.|+.||+.+|++++++.+ .+++++|+||++|||+....
T Consensus 226 ~~E~~~~~p~~------------------~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~- 286 (478)
T 4dqv_A 226 FTEDADIRVIS------------------PTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYA- 286 (478)
T ss_dssp CCSSSCHHHHC------------------CEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSS-
T ss_pred cCCcccccccC------------------cccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccC-
Confidence 44432111100 00112234557899999999999999876 69999999999999985421
Q ss_pred CCCCCCCCc-hHHHHHH-HhcCcee-EEeec------CCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCC
Q psy7538 263 PGWTDNING-PTGLLIG-AGKGVIR-SMYCK------NTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKD 333 (543)
Q Consensus 263 ~gw~d~~~g-~~~~~~~-~~~g~~~-~~~~~------~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~ 333 (543)
|- .+... ...++.. ...|... .+.+. ++..+|+|||||+|++++.++..... .....+++||++++..
T Consensus 287 -g~-~~~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~-~~~~~~~~ynv~~~~~ 363 (478)
T 4dqv_A 287 -GQ-LNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAG-SSLAGFATYHVMNPHD 363 (478)
T ss_dssp -SC-CCTTBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC--CCCCSEEEEEESCCCC
T ss_pred -Cc-CCHHHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhccc-CCCCCCceEEecCCCC
Confidence 10 01111 1122322 2334432 12222 26889999999999999999876321 1112478999999833
Q ss_pred CcccHHHHHHHHhhhhcCc
Q psy7538 334 YKITWQEICDIGKDIVTSK 352 (543)
Q Consensus 334 ~~~t~~e~~~~i~~~~G~~ 352 (543)
+++||.|+++.+.+. |.+
T Consensus 364 ~~~s~~el~~~l~~~-g~~ 381 (478)
T 4dqv_A 364 DGIGLDEYVDWLIEA-GYP 381 (478)
T ss_dssp SSCSHHHHHHHHHHT-TCS
T ss_pred CCcCHHHHHHHHHHc-CCC
Confidence 349999999999986 454
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-33 Score=294.11 Aligned_cols=282 Identities=13% Similarity=0.076 Sum_probs=196.1
Q ss_pred hhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCC--------------HHHHHHHHhcCchhHHHHh
Q psy7538 25 AKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKT--------------PNQRVEELFESPVFDALKT 90 (543)
Q Consensus 25 ~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~--------------~~~rl~~~~~~~~f~~l~~ 90 (543)
-.+.++++|||||||||||++|+++|++.|+ +|+++.|...+.. ..+++.++.
T Consensus 6 ~~~~~~~~vlVTG~tGfIG~~l~~~L~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---------- 72 (404)
T 1i24_A 6 HHHHHGSRVMVIGGDGYCGWATALHLSKKNY---EVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWK---------- 72 (404)
T ss_dssp ------CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHH----------
T ss_pred ccccCCCeEEEeCCCcHHHHHHHHHHHhCCC---eEEEEEecCccccccccccccccccchhhhhhhhHh----------
Confidence 3577899999999999999999999999987 7889887532100 011121110
Q ss_pred hcCcCCCCceEEEEccCCCCCCCCCHHHHHHHhcC--ccEEEEcCccCCCc---ccH---HHHHHHHHHHHHHHHHHHHh
Q psy7538 91 LRGKSILQKIQVISGDITQLKLGISEIDKKELIDN--VDIVYHVAATIRFD---EPI---KTAVILNTRGTRDMLELSKQ 162 (543)
Q Consensus 91 ~~~~~~~~~v~~i~gDl~~~~lgls~~~~~~l~~~--vd~ViH~AA~v~~~---~~~---~~~~~~Nv~gt~~ll~~a~~ 162 (543)
.....++.++.+|+++++ ++..++++ +|+|||+||..... ... ...+++|+.||.+++++|++
T Consensus 73 ---~~~~~~v~~~~~Dl~d~~------~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~ 143 (404)
T 1i24_A 73 ---ALTGKSIELYVGDICDFE------FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKE 143 (404)
T ss_dssp ---HHHCCCCEEEESCTTSHH------HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---hccCCceEEEECCCCCHH------HHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHH
Confidence 001246889999999865 78888887 99999999976532 122 24789999999999999998
Q ss_pred ccCC-ceEEEEecCccccCC-CcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHh
Q psy7538 163 MKNL-KCFTYISTAYCHPSE-KVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECM 240 (543)
Q Consensus 163 ~~~l-~~~V~vST~y~~~~~-~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~ 240 (543)
. +. ++|||+||+++++.. .+++|+.++... ...+...+ ......+.|+.||+.+|+++..++
T Consensus 144 ~-~~~~~~V~~SS~~vyg~~~~~~~E~~~~~~~--------------~~~~~~~~-~~~~~~~~Y~~sK~~~e~~~~~~~ 207 (404)
T 1i24_A 144 F-GEECHLVKLGTMGEYGTPNIDIEEGYITITH--------------NGRTDTLP-YPKQASSFYHLSKVHDSHNIAFTC 207 (404)
T ss_dssp H-CTTCEEEEECCGGGGCCCSSCBCSSEEEEEE--------------TTEEEEEE-CCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred h-CCCcEEEEeCcHHHhCCCCCCCCcccccccc--------------cccccccc-CCCCCCChhHHHHHHHHHHHHHHH
Confidence 7 66 599999999776643 245554211000 00000000 000112799999999999998876
Q ss_pred h-cCCcEEEEecCeeeecCCCC---CCCCCCCC-------CchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHH
Q psy7538 241 E-LGMPCMILRPSIVVPIYKEP---LPGWTDNI-------NGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFL 309 (543)
Q Consensus 241 ~-~~lp~~IlRps~V~G~~~~p---~~gw~d~~-------~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~ 309 (543)
. .+++++++||+.|||+...+ .|+|++.. .....++..+..|....+++++++.+++|||+|+|++++.
T Consensus 208 ~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~ 287 (404)
T 1i24_A 208 KAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEI 287 (404)
T ss_dssp HHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHH
T ss_pred HhcCCeEEEEecceeeCCCCCccccccccccccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHH
Confidence 6 68999999999999998754 23333222 1123466677778776678899999999999999999999
Q ss_pred HhhhhcccCCCCCC--cEEEeecCCCCcccHHHHHHHHhhh---hcCc
Q psy7538 310 FTWDFLNSKESERK--SVCNLTSNKDYKITWQEICDIGKDI---VTSK 352 (543)
Q Consensus 310 a~~~~~~~~~~~~~--~vyni~s~~~~~~t~~e~~~~i~~~---~G~~ 352 (543)
++..... .+ ++||+++ +++|+.|+++.+.+. .|.+
T Consensus 288 ~l~~~~~-----~g~~~~yni~~---~~~s~~e~~~~i~~~~~~~g~~ 327 (404)
T 1i24_A 288 AIANPAK-----AGEFRVFNQFT---EQFSVNELASLVTKAGSKLGLD 327 (404)
T ss_dssp HHHSCCC-----TTCEEEEEECS---EEEEHHHHHHHHHHHHHTTTCC
T ss_pred HHhCccc-----CCCceEEEECC---CCCcHHHHHHHHHHHHHhhCCC
Confidence 9876543 24 6999986 579999999999987 5444
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-32 Score=280.44 Aligned_cols=254 Identities=17% Similarity=0.131 Sum_probs=197.1
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
.+|+|||||||||||++|+++|++.|+ +|++++|...... .++++.+ ....++.++.+|++
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~-~~~~~~~---------------~~~~~~~~~~~Dl~ 73 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEKGY---RVHGLVARRSSDT-RWRLREL---------------GIEGDIQYEDGDMA 73 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCCSSCC-CHHHHHT---------------TCGGGEEEEECCTT
T ss_pred cCCeEEEECCCChHHHHHHHHHHHCCC---eEEEEeCCCcccc-ccchhhc---------------cccCceEEEECCCC
Confidence 468999999999999999999999986 8999999865422 1222221 01247889999999
Q ss_pred CCCCCCCHHHHHHHhcC--ccEEEEcCccCCC---cccHHHHHHHHHHHHHHHHHHHHhccCC-ceEEEEecCccccCC-
Q psy7538 109 QLKLGISEIDKKELIDN--VDIVYHVAATIRF---DEPIKTAVILNTRGTRDMLELSKQMKNL-KCFTYISTAYCHPSE- 181 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~--vd~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l-~~~V~vST~y~~~~~- 181 (543)
+++ ++..++++ +|+|||+||.... .+.....+++|+.|+.+++++|++. ++ ++|||+||.++++..
T Consensus 74 d~~------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~SS~~v~g~~~ 146 (335)
T 1rpn_A 74 DAC------SVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQF-SPETRFYQASTSEMFGLIQ 146 (335)
T ss_dssp CHH------HHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTSEEEEEEEGGGGCSCS
T ss_pred CHH------HHHHHHHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEEeCHHHhCCCC
Confidence 865 78888775 6999999997654 2456778999999999999999997 65 899999999776543
Q ss_pred -CcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCC
Q psy7538 182 -KVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYK 259 (543)
Q Consensus 182 -~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~ 259 (543)
.+++|+..+.|. +.|+.||+.+|.++..+.. .+++++++||+.+||+..
T Consensus 147 ~~~~~E~~~~~p~-----------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~ 197 (335)
T 1rpn_A 147 AERQDENTPFYPR-----------------------------SPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLR 197 (335)
T ss_dssp SSSBCTTSCCCCC-----------------------------SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTS
T ss_pred CCCCCcccCCCCC-----------------------------ChhHHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCC
Confidence 356666443332 7999999999999998876 689999999999999865
Q ss_pred CCCCCCCCCCCc--hHHHHHHHhcCce-eEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcc
Q psy7538 260 EPLPGWTDNING--PTGLLIGAGKGVI-RSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKI 336 (543)
Q Consensus 260 ~p~~gw~d~~~g--~~~~~~~~~~g~~-~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~ 336 (543)
.+ ++.. ...++..+..|.. ....+++++.+++||++|+|++++.++.... +++||++++ +++
T Consensus 198 ~~------~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~-------~~~~ni~~~--~~~ 262 (335)
T 1rpn_A 198 GI------EFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK-------ADDYVVATG--VTT 262 (335)
T ss_dssp CT------TSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS-------CCCEEECCS--CEE
T ss_pred CC------CcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHHhcCC-------CCEEEEeCC--CCc
Confidence 32 1110 1234455566653 3456888999999999999999999886532 469999998 899
Q ss_pred cHHHHHHHHhhhhcCc
Q psy7538 337 TWQEICDIGKDIVTSK 352 (543)
Q Consensus 337 t~~e~~~~i~~~~G~~ 352 (543)
|+.|+++.+.+.+|.+
T Consensus 263 s~~e~~~~i~~~~g~~ 278 (335)
T 1rpn_A 263 TVRDMCQIAFEHVGLD 278 (335)
T ss_dssp EHHHHHHHHHHTTTCC
T ss_pred cHHHHHHHHHHHhCCC
Confidence 9999999999999654
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-32 Score=278.61 Aligned_cols=248 Identities=18% Similarity=0.205 Sum_probs=193.4
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|||||||||||++++++|++.|+ +|+++.|...... .....++.++.+|++++
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~---~V~~~~r~~~~~~----------------------~~~~~~~~~~~~Dl~~~ 55 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARGL---EVAVLDNLATGKR----------------------ENVPKGVPFFRVDLRDK 55 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTC---EEEEECCCSSCCG----------------------GGSCTTCCEECCCTTCH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCC---EEEEEECCCcCch----------------------hhcccCeEEEECCCCCH
Confidence 5899999999999999999999987 7888888543211 11113577889999986
Q ss_pred CCCCCHHHHHHHhc--CccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecC-ccccC---C
Q psy7538 111 KLGISEIDKKELID--NVDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTA-YCHPS---E 181 (543)
Q Consensus 111 ~lgls~~~~~~l~~--~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~-y~~~~---~ 181 (543)
+ ++..+++ ++|+|||+||..... +.....+++|+.|+.+++++|++. ++++|||+||. .+++. .
T Consensus 56 ~------~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iv~~SS~~~~~g~~~~~ 128 (311)
T 2p5y_A 56 E------GVERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQY-GVEKLVFASTGGAIYGEVPEG 128 (311)
T ss_dssp H------HHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEHHHHHCCCCTT
T ss_pred H------HHHHHHHhcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEeCCChhhcCCCCCC
Confidence 5 7888877 899999999976532 345678999999999999999987 78999999998 55543 2
Q ss_pred CcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCC
Q psy7538 182 KVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKE 260 (543)
Q Consensus 182 ~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~ 260 (543)
.+++|+..+.|. +.|+.||+.+|++++.+.. .+++++++||+.|||+...
T Consensus 129 ~~~~E~~~~~~~-----------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~ 179 (311)
T 2p5y_A 129 ERAEETWPPRPK-----------------------------SPYAASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQD 179 (311)
T ss_dssp CCBCTTSCCCCC-----------------------------SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCC
T ss_pred CCcCCCCCCCCC-----------------------------ChHHHHHHHHHHHHHHHHHHcCCCEEEEeeccccCcCCC
Confidence 356665433332 7999999999999988765 6899999999999999764
Q ss_pred CCCCCCCCCCc-hHHHHHHHhcCceeEEe-----ecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCC
Q psy7538 261 PLPGWTDNING-PTGLLIGAGKGVIRSMY-----CKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDY 334 (543)
Q Consensus 261 p~~gw~d~~~g-~~~~~~~~~~g~~~~~~-----~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~ 334 (543)
+.. ..+ ...++..+..|....++ +++++.++++|++|+|++++.++... +++||++++ .
T Consensus 180 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~--------~~~~~i~~~--~ 244 (311)
T 2p5y_A 180 PHG-----EAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALFSL--------EGIYNVGTG--E 244 (311)
T ss_dssp SSS-----TTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHHHHC--------CEEEEESCS--C
T ss_pred CCC-----cCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHHhCC--------CCEEEeCCC--C
Confidence 311 011 12344555567665566 78889999999999999999888652 469999998 8
Q ss_pred cccHHHHHHHHhhhhcCccC
Q psy7538 335 KITWQEICDIGKDIVTSKIP 354 (543)
Q Consensus 335 ~~t~~e~~~~i~~~~G~~~p 354 (543)
++|+.|+++.+.+.+|.+.+
T Consensus 245 ~~s~~e~~~~i~~~~g~~~~ 264 (311)
T 2p5y_A 245 GHTTREVLMAVAEAAGKAPE 264 (311)
T ss_dssp CEEHHHHHHHHHHHHTCCCC
T ss_pred CccHHHHHHHHHHHhCCCCC
Confidence 99999999999999965543
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-32 Score=279.59 Aligned_cols=248 Identities=15% Similarity=0.165 Sum_probs=187.2
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
.+|+|||||||||||++|+++|++.|+ +|++++|+..... ++ ...+++++.+|++
T Consensus 12 ~~M~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~---~l-------------------~~~~~~~~~~Dl~ 66 (342)
T 2x4g_A 12 AHVKYAVLGATGLLGHHAARAIRAAGH---DLVLIHRPSSQIQ---RL-------------------AYLEPECRVAEML 66 (342)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEECTTSCGG---GG-------------------GGGCCEEEECCTT
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEecChHhhh---hh-------------------ccCCeEEEEecCC
Confidence 447999999999999999999999986 8999999764311 00 0126889999999
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCC---cc
Q psy7538 109 QLKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEK---VL 184 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~---~i 184 (543)
+++ ++..+++++|+|||+||.... .++....+++|+.|+.+++++|++. ++++|||+||.++++... ..
T Consensus 67 d~~------~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~~~~~ 139 (342)
T 2x4g_A 67 DHA------GLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQA-RVPRILYVGSAYAMPRHPQGLPG 139 (342)
T ss_dssp CHH------HHHHHTTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHH-TCSCEEEECCGGGSCCCTTSSCB
T ss_pred CHH------HHHHHHcCCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEECCHHhhCcCCCCCCC
Confidence 875 789999999999999997653 2455668999999999999999998 889999999997765432 23
Q ss_pred cccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCC-CCCC
Q psy7538 185 EERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYK-EPLP 263 (543)
Q Consensus 185 ~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~-~p~~ 263 (543)
+|+..+.|.. ...+.|+.+|+.+|++++.++..+++++++||+.|||+.. .+
T Consensus 140 ~E~~~~~p~~-------------------------~~~~~Y~~sK~~~e~~~~~~~~~g~~~~ilrp~~v~g~~~~~~-- 192 (342)
T 2x4g_A 140 HEGLFYDSLP-------------------------SGKSSYVLCKWALDEQAREQARNGLPVVIGIPGMVLGELDIGP-- 192 (342)
T ss_dssp CTTCCCSSCC-------------------------TTSCHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEECSCCSSC--
T ss_pred CCCCCCCccc-------------------------cccChHHHHHHHHHHHHHHHhhcCCcEEEEeCCceECCCCccc--
Confidence 5554333200 0027999999999999988754389999999999999865 21
Q ss_pred CCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHHH
Q psy7538 264 GWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEICD 343 (543)
Q Consensus 264 gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~~ 343 (543)
+ ...++..+..|....+ ++..++++|++|+|++++.++.+... +++||++++ + +|+.|+++
T Consensus 193 ----~---~~~~~~~~~~~~~~~~---~~~~~~~i~v~Dva~~~~~~~~~~~~------g~~~~v~~~--~-~s~~e~~~ 253 (342)
T 2x4g_A 193 ----T---TGRVITAIGNGEMTHY---VAGQRNVIDAAEAGRGLLMALERGRI------GERYLLTGH--N-LEMADLTR 253 (342)
T ss_dssp ----S---TTHHHHHHHTTCCCEE---ECCEEEEEEHHHHHHHHHHHHHHSCT------TCEEEECCE--E-EEHHHHHH
T ss_pred ----c---HHHHHHHHHcCCCccc---cCCCcceeeHHHHHHHHHHHHhCCCC------CceEEEcCC--c-ccHHHHHH
Confidence 1 1245566666765543 57889999999999999999876543 779999998 7 99999999
Q ss_pred HHhhhhcCccC
Q psy7538 344 IGKDIVTSKIP 354 (543)
Q Consensus 344 ~i~~~~G~~~p 354 (543)
.+.+.+|.+.+
T Consensus 254 ~i~~~~g~~~~ 264 (342)
T 2x4g_A 254 RIAELLGQPAP 264 (342)
T ss_dssp HHHHHHTCCCC
T ss_pred HHHHHhCCCCC
Confidence 99999965433
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-33 Score=281.71 Aligned_cols=272 Identities=14% Similarity=0.068 Sum_probs=202.4
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
|++|+||||| +||||++|+++|++.|+ +|+++.|+... ...++.++.+|+
T Consensus 1 M~~~~ilVtG-aG~iG~~l~~~L~~~g~---~V~~~~r~~~~--------------------------~~~~~~~~~~Dl 50 (286)
T 3gpi_A 1 MSLSKILIAG-CGDLGLELARRLTAQGH---EVTGLRRSAQP--------------------------MPAGVQTLIADV 50 (286)
T ss_dssp -CCCCEEEEC-CSHHHHHHHHHHHHTTC---CEEEEECTTSC--------------------------CCTTCCEEECCT
T ss_pred CCCCcEEEEC-CCHHHHHHHHHHHHCCC---EEEEEeCCccc--------------------------cccCCceEEccC
Confidence 3578999999 59999999999999987 78999998642 235788999999
Q ss_pred CCCCCCCCHHHHHHHhcC-ccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC--Ccc
Q psy7538 108 TQLKLGISEIDKKELIDN-VDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE--KVL 184 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~-vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~--~~i 184 (543)
++++ ++..++++ +|+|||+||... .......++|+.|+.+++++|++. ++++|||+||+.+++.. .++
T Consensus 51 ~d~~------~~~~~~~~~~d~vih~a~~~~--~~~~~~~~~n~~~~~~ll~a~~~~-~~~~~v~~SS~~vyg~~~~~~~ 121 (286)
T 3gpi_A 51 TRPD------TLASIVHLRPEILVYCVAASE--YSDEHYRLSYVEGLRNTLSALEGA-PLQHVFFVSSTGVYGQEVEEWL 121 (286)
T ss_dssp TCGG------GCTTGGGGCCSEEEECHHHHH--HC-----CCSHHHHHHHHHHTTTS-CCCEEEEEEEGGGCCCCCSSEE
T ss_pred CChH------HHHHhhcCCCCEEEEeCCCCC--CCHHHHHHHHHHHHHHHHHHHhhC-CCCEEEEEcccEEEcCCCCCCC
Confidence 9886 67777777 999999999743 345667889999999999999986 89999999999776643 356
Q ss_pred cccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCCC
Q psy7538 185 EERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPG 264 (543)
Q Consensus 185 ~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~g 264 (543)
+|+..+.|. +.|+.+|..+|++ .++ ++++++||+.|||+...
T Consensus 122 ~E~~~~~p~-----------------------------~~Y~~sK~~~E~~-~~~----~~~~ilR~~~v~G~~~~---- 163 (286)
T 3gpi_A 122 DEDTPPIAK-----------------------------DFSGKRMLEAEAL-LAA----YSSTILRFSGIYGPGRL---- 163 (286)
T ss_dssp CTTSCCCCC-----------------------------SHHHHHHHHHHHH-GGG----SSEEEEEECEEEBTTBC----
T ss_pred CCCCCCCCC-----------------------------ChhhHHHHHHHHH-Hhc----CCeEEEecccccCCCch----
Confidence 776544433 8999999999998 543 89999999999998642
Q ss_pred CCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHHHH
Q psy7538 265 WTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEICDI 344 (543)
Q Consensus 265 w~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~~~ 344 (543)
.++..+.. .. ..++++...++||++|+|++++.++..... . ..+++||++++ +++|+.|+++.
T Consensus 164 ---------~~~~~~~~-~~--~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~--~~~~~~~~~~~--~~~s~~e~~~~ 226 (286)
T 3gpi_A 164 ---------RMIRQAQT-PE--QWPARNAWTNRIHRDDGAAFIAYLIQQRSH-A--VPERLYIVTDN--QPLPVHDLLRW 226 (286)
T ss_dssp ---------HHHHHTTC-GG--GSCSSBCEECEEEHHHHHHHHHHHHHHHTT-S--CCCSEEEECCS--CCEEHHHHHHH
T ss_pred ---------hHHHHHHh-cc--cCCCcCceeEEEEHHHHHHHHHHHHhhhcc-C--CCCceEEEeCC--CCCCHHHHHHH
Confidence 24444444 22 247788999999999999999999988521 0 14789999998 89999999999
Q ss_pred HhhhhcCccCCCCccccCccccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHhhc
Q psy7538 345 GKDIVTSKIPFNSTLWYPGGTMTQSRLTHFICCLLFHWIPAYFLDAVILISGNKPCLVRIQERIHRGFD 413 (543)
Q Consensus 345 i~~~~G~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~d~~~~~~G~kP~~~~~~~~l~~~~~ 413 (543)
+.+.+|.+.+.......+ .+.. ...+.+ +.+||+|+...+.+.+.+..+
T Consensus 227 i~~~~g~~~~~~~~~~~~-----~~~~--------------~d~~k~-~~lG~~p~~~~l~e~l~~~~~ 275 (286)
T 3gpi_A 227 LADRQGIAYPAGATPPVQ-----GNKK--------------LSNARL-LASGYQLIYPDYVSGYGALLA 275 (286)
T ss_dssp HHHHTTCCCCCSCCCCBC-----SSCE--------------ECCHHH-HHTTCCCSSCSHHHHHHHHHH
T ss_pred HHHHcCCCCCCCCCcccC-----CCeE--------------eeHHHH-HHcCCCCcCCcHHHHHHHHHH
Confidence 999997665543321111 0000 112333 379999998556666665443
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-33 Score=282.82 Aligned_cols=249 Identities=14% Similarity=0.143 Sum_probs=188.6
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
++|+|||||||||||++|+++|++.|+ +|+++.|.. .+|++
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~L~~~g~---~v~~~~r~~------------------------------------~~D~~ 42 (321)
T 1e6u_A 2 AKQRVFIAGHRGMVGSAIRRQLEQRGD---VELVLRTRD------------------------------------ELNLL 42 (321)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTT---EEEECCCTT------------------------------------TCCTT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCC---eEEEEecCc------------------------------------cCCcc
Confidence 468999999999999999999999986 677777642 26887
Q ss_pred CCCCCCCHHHHHHHhc--CccEEEEcCccCCC----cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC-
Q psy7538 109 QLKLGISEIDKKELID--NVDIVYHVAATIRF----DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE- 181 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~--~vd~ViH~AA~v~~----~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~- 181 (543)
+++ ++..+++ ++|+|||+||.... .......+++|+.|+.+++++|++. ++++|||+||..+++..
T Consensus 43 d~~------~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~vyg~~~ 115 (321)
T 1e6u_A 43 DSR------AVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN-DVNKLLFLGSSCIYPKLA 115 (321)
T ss_dssp CHH------HHHHHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGGGSCTTC
T ss_pred CHH------HHHHHHHhcCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEccHHHcCCCC
Confidence 754 7888888 89999999998753 3456678999999999999999997 78999999999776543
Q ss_pred -CcccccccCC-CCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecC
Q psy7538 182 -KVLEERTYLP-PDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIY 258 (543)
Q Consensus 182 -~~i~E~~y~~-p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~ 258 (543)
.+++|+.... +..|. .+.|+.+|..+|+++..+.. .+++++++||+.|||+.
T Consensus 116 ~~~~~E~~~~~~~~~p~-------------------------~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~ 170 (321)
T 1e6u_A 116 KQPMAESELLQGTLEPT-------------------------NEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPH 170 (321)
T ss_dssp CSSBCGGGTTSSCCCGG-------------------------GHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTT
T ss_pred CCCcCccccccCCCCCC-------------------------CCccHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcC
Confidence 3566653211 11110 05899999999999998776 58999999999999997
Q ss_pred CCCCCCCCCCCCchHHHHHHHhc----C-ceeEEeecCCcccccchHHHHHHHHHHHhhhhccc---CCCCCCcEEEeec
Q psy7538 259 KEPLPGWTDNINGPTGLLIGAGK----G-VIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNS---KESERKSVCNLTS 330 (543)
Q Consensus 259 ~~p~~gw~d~~~g~~~~~~~~~~----g-~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~---~~~~~~~vyni~s 330 (543)
..+.+.. + .....++..+.. | ....++++++..+++||++|+|++++.++.+.... .....+++||+++
T Consensus 171 ~~~~~~~--~-~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~ 247 (321)
T 1e6u_A 171 DNFHPSN--S-HVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGT 247 (321)
T ss_dssp CCCCTTC--S-SHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESC
T ss_pred CCCCCCC--C-ccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCC
Confidence 6532110 0 111234444432 4 44556788999999999999999999998765420 0001257999999
Q ss_pred CCCCcccHHHHHHHHhhhhcCcc
Q psy7538 331 NKDYKITWQEICDIGKDIVTSKI 353 (543)
Q Consensus 331 ~~~~~~t~~e~~~~i~~~~G~~~ 353 (543)
+ +++|+.|+++.+.+.+|.+.
T Consensus 248 ~--~~~s~~e~~~~i~~~~g~~~ 268 (321)
T 1e6u_A 248 G--VDCTIRELAQTIAKVVGYKG 268 (321)
T ss_dssp S--CCEEHHHHHHHHHHHHTCCS
T ss_pred C--CCccHHHHHHHHHHHhCCCC
Confidence 8 88999999999999996543
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-32 Score=278.35 Aligned_cols=250 Identities=18% Similarity=0.165 Sum_probs=191.3
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhh--CCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRL--EPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~--g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+|+|||||||||||++|+++|++. |+ +|++++|+..... + ..++.++.+|+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~---~V~~~~r~~~~~~----~--------------------~~~~~~~~~D~ 54 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTE---NVIASDIRKLNTD----V--------------------VNSGPFEVVNA 54 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGG---GEEEEESCCCSCH----H--------------------HHSSCEEECCT
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCC---EEEEEcCCCcccc----c--------------------cCCCceEEecC
Confidence 478999999999999999999998 76 7889999764311 1 01456889999
Q ss_pred CCCCCCCCHHHHHHHhc--CccEEEEcCccCCC--cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC--
Q psy7538 108 TQLKLGISEIDKKELID--NVDIVYHVAATIRF--DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE-- 181 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~--~vd~ViH~AA~v~~--~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~-- 181 (543)
++++ ++..+++ ++|+|||+||.... .......+++|+.|+.+++++|++. ++++|||+||..+++..
T Consensus 55 ~d~~------~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~~~~~~~ 127 (312)
T 2yy7_A 55 LDFN------QIEHLVEVHKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAK-KIKKIFWPSSIAVFGPTTP 127 (312)
T ss_dssp TCHH------HHHHHHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTT-SCSEEECCEEGGGCCTTSC
T ss_pred CCHH------HHHHHHhhcCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHHHhCCCCC
Confidence 9865 7888887 89999999997643 2456678999999999999999997 78999999999777643
Q ss_pred -CcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCC
Q psy7538 182 -KVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYK 259 (543)
Q Consensus 182 -~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~ 259 (543)
.+++|+....|. +.|+.||+.+|+++..+.. .+++++++||+.|||+..
T Consensus 128 ~~~~~e~~~~~~~-----------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~ 178 (312)
T 2yy7_A 128 KENTPQYTIMEPS-----------------------------TVYGISKQAGERWCEYYHNIYGVDVRSIRYPGLISWST 178 (312)
T ss_dssp SSSBCSSCBCCCC-----------------------------SHHHHHHHHHHHHHHHHHHHHCCEEECEEECEEECSSS
T ss_pred CCCccccCcCCCC-----------------------------chhHHHHHHHHHHHHHHHHhcCCcEEEEeCCeEecCCC
Confidence 245555433332 7999999999999988766 689999999999999876
Q ss_pred CCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHH
Q psy7538 260 EPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQ 339 (543)
Q Consensus 260 ~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~ 339 (543)
.|..+.. ......+.....+.....++++++.+++||++|+|++++.++..... . ...+++||+++ +++|+.
T Consensus 179 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~-~-~~~~~~~ni~~---~~~s~~ 250 (312)
T 2yy7_A 179 PPGGGTT---DYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPVE-K-IKIHSSYNLAA---MSFTPT 250 (312)
T ss_dssp CCCSCTT---THHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHHHHHSCGG-G-CCCSSCEECCS---EEECHH
T ss_pred CCCCchh---hhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHHHHhCccc-c-cccCceEEeCC---CccCHH
Confidence 5432110 11222333333333445577888999999999999999999876542 0 00147999984 579999
Q ss_pred HHHHHHhhhhc
Q psy7538 340 EICDIGKDIVT 350 (543)
Q Consensus 340 e~~~~i~~~~G 350 (543)
|+++.+.+.+|
T Consensus 251 e~~~~i~~~~~ 261 (312)
T 2yy7_A 251 EIANEIKKHIP 261 (312)
T ss_dssp HHHHHHHTTCT
T ss_pred HHHHHHHHHCC
Confidence 99999999984
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-33 Score=280.32 Aligned_cols=244 Identities=16% Similarity=0.120 Sum_probs=185.8
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCH-HHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTP-NQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~-~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
.+|+|||||||||||++|+++|++.|+ +|++++|....... .+.+.+ .....++.++.+|+
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~---------------~~~~~~~~~~~~Dl 67 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGE---EVTVLDDLRVPPMIPPEGTGK---------------FLEKPVLELEERDL 67 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTC---CEEEECCCSSCCSSCCTTSSE---------------EECSCGGGCCHHHH
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCC---EEEEEecCCcccccchhhhhh---------------hccCCCeeEEeCcc
Confidence 578999999999999999999999987 78999998652100 000000 00012333334433
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCccCCC---cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC--C
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAATIRF---DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE--K 182 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~--~ 182 (543)
+ ++|+|||+||.... .......++ |+.|+.+++++|++. ++++|||+||.++++.. .
T Consensus 68 ~----------------~~d~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~-~v~~~v~~SS~~v~~~~~~~ 129 (321)
T 3vps_A 68 S----------------DVRLVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSV-GVPKVVVGSTCEVYGQADTL 129 (321)
T ss_dssp T----------------TEEEEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCSCSSS
T ss_pred c----------------cCCEEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHc-CCCeEEEecCHHHhCCCCCC
Confidence 3 89999999998753 122334566 999999999999998 79999999999776643 3
Q ss_pred cccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCC-cEEEEecCeeeecCCC
Q psy7538 183 VLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGM-PCMILRPSIVVPIYKE 260 (543)
Q Consensus 183 ~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~l-p~~IlRps~V~G~~~~ 260 (543)
+++|+....|. +.|+.+|+.+|+++..+.. .++ +++++||+.|||+...
T Consensus 130 ~~~E~~~~~p~-----------------------------~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~ 180 (321)
T 3vps_A 130 PTPEDSPLSPR-----------------------------SPYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGER 180 (321)
T ss_dssp SBCTTSCCCCC-----------------------------SHHHHHHHHHHHHHHHHHHSSSSCEEEEEEECEEECTTCC
T ss_pred CCCCCCCCCCC-----------------------------ChhHHHHHHHHHHHHHHHHHcCCCceEEEEeccccCcCCC
Confidence 56776444333 8999999999999999887 689 9999999999998764
Q ss_pred CCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHH
Q psy7538 261 PLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQE 340 (543)
Q Consensus 261 p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e 340 (543)
+ + .....++..+..|....++++++..+++||++|+|++++.++..... + +||++++ +++|+.|
T Consensus 181 ~------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~------g-~~~i~~~--~~~s~~e 244 (321)
T 3vps_A 181 P------D-ALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPLP------S-VVNFGSG--QSLSVND 244 (321)
T ss_dssp T------T-SHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSCCC------S-EEEESCS--CCEEHHH
T ss_pred C------C-ChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcCCC------C-eEEecCC--CcccHHH
Confidence 3 0 11234666677777777788999999999999999999999877553 6 9999998 8999999
Q ss_pred HHHHHhhhhcCccC
Q psy7538 341 ICDIGKDIVTSKIP 354 (543)
Q Consensus 341 ~~~~i~~~~G~~~p 354 (543)
+++.+. .+|.+.+
T Consensus 245 ~~~~i~-~~g~~~~ 257 (321)
T 3vps_A 245 VIRILQ-ATSPAAE 257 (321)
T ss_dssp HHHHHH-TTCTTCE
T ss_pred HHHHHH-HhCCCCc
Confidence 999999 8865543
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-32 Score=278.25 Aligned_cols=255 Identities=18% Similarity=0.261 Sum_probs=196.7
Q ss_pred CEEEEEcCcchhHHHHHHHHHhh-CCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRL-EPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~-g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
|+|||||||||||++|+++|++. |+ +|+++.|....... ++++++ ....++.++.+|+++
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~---~V~~~~r~~~~~~~-~~~~~~---------------~~~~~~~~~~~Dl~d 61 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQD---TVVNIDKLTYAGNL-ESLSDI---------------SESNRYNFEHADICD 61 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSC---EEEEEECCCTTCCG-GGGTTT---------------TTCTTEEEEECCTTC
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCC---eEEEEecCCCCCch-hhhhhh---------------hcCCCeEEEECCCCC
Confidence 57999999999999999999998 55 89999987532111 111100 012478999999998
Q ss_pred CCCCCCHHHHHHHhc--CccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhc-cCCc-------eEEEEecCc
Q psy7538 110 LKLGISEIDKKELID--NVDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQM-KNLK-------CFTYISTAY 176 (543)
Q Consensus 110 ~~lgls~~~~~~l~~--~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~-------~~V~vST~y 176 (543)
++ ++..+++ ++|+|||+||....+ +.....+++|+.|+.+++++|.+. .+++ +|||+||.+
T Consensus 62 ~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~ 135 (361)
T 1kew_A 62 SA------EITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDE 135 (361)
T ss_dssp HH------HHHHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGG
T ss_pred HH------HHHHHHhhcCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHH
Confidence 75 7888887 899999999987532 345678999999999999999875 2566 999999987
Q ss_pred cccCCC------------cccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cC
Q psy7538 177 CHPSEK------------VLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LG 243 (543)
Q Consensus 177 ~~~~~~------------~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~ 243 (543)
+++... +++|+....| .+.|+.||+.+|.+++.++. .+
T Consensus 136 v~g~~~~~~~~~~~~~~~~~~E~~~~~~-----------------------------~~~Y~~sK~~~e~~~~~~~~~~g 186 (361)
T 1kew_A 136 VYGDLPHPDEVENSVTLPLFTETTAYAP-----------------------------SSPYSASKASSDHLVRAWRRTYG 186 (361)
T ss_dssp GGCCCCCGGGSCTTSCCCCBCTTSCCCC-----------------------------CSHHHHHHHHHHHHHHHHHHHHC
T ss_pred HhCCCcccccccccccCCCCCCCCCCCC-----------------------------CCccHHHHHHHHHHHHHHHHHhC
Confidence 665432 3444432222 27999999999999998776 68
Q ss_pred CcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCC
Q psy7538 244 MPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERK 323 (543)
Q Consensus 244 lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~ 323 (543)
++++++||+.|||+...+. .....++..+..|....++++++...+++|++|+|++++.++.... .+
T Consensus 187 i~~~~vrp~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~------~g 253 (361)
T 1kew_A 187 LPTIVTNCSNNYGPYHFPE-------KLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGK------AG 253 (361)
T ss_dssp CCEEEEEECEEESTTCCTT-------SHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC------TT
T ss_pred CcEEEEeeceeECCCCCcc-------cHHHHHHHHHHcCCCceEcCCCceeEeeEEHHHHHHHHHHHHhCCC------CC
Confidence 9999999999999975420 1122355666677666677888999999999999999999887543 37
Q ss_pred cEEEeecCCCCcccHHHHHHHHhhhhcCccC
Q psy7538 324 SVCNLTSNKDYKITWQEICDIGKDIVTSKIP 354 (543)
Q Consensus 324 ~vyni~s~~~~~~t~~e~~~~i~~~~G~~~p 354 (543)
++||++++ .++|+.|+++.+.+.+|...|
T Consensus 254 ~~~~v~~~--~~~s~~e~~~~i~~~~g~~~~ 282 (361)
T 1kew_A 254 ETYNIGGH--NEKKNLDVVFTICDLLDEIVP 282 (361)
T ss_dssp CEEEECCC--CEEEHHHHHHHHHHHHHHHSC
T ss_pred CEEEecCC--CeeeHHHHHHHHHHHhCCcCc
Confidence 89999998 889999999999999866544
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-32 Score=275.29 Aligned_cols=265 Identities=16% Similarity=0.160 Sum_probs=190.2
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCC-CHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGK-TPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~-~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
|+|||||||||||++++++|++.|+ +|+++.|..... ...+++++. ...++.++.+|+++
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~---~V~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~Dl~~ 61 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNGH---DVIILDNLCNSKRSVLPVIERL----------------GGKHPTFVEGDIRN 61 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSSCCTTHHHHHHHH----------------HTSCCEEEECCTTC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEecCCCcchhHHHHHHhh----------------cCCcceEEEccCCC
Confidence 5899999999999999999999987 788888754322 222222111 01357889999998
Q ss_pred CCCCCCHHHHHHHhc--CccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC--C
Q psy7538 110 LKLGISEIDKKELID--NVDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE--K 182 (543)
Q Consensus 110 ~~lgls~~~~~~l~~--~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~--~ 182 (543)
++ ++..+++ ++|+|||+||..... +.....+++|+.|+.+++++|++. ++++|||+||+.+++.. .
T Consensus 62 ~~------~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~~~g~~~~~ 134 (338)
T 1udb_A 62 EA------LMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNFIFSSSATVYGDNPKI 134 (338)
T ss_dssp HH------HHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCSCCSS
T ss_pred HH------HHHHHhhccCCCEEEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEEccHHHhCCCCCC
Confidence 65 6777776 599999999976432 334568899999999999999987 78999999999776532 3
Q ss_pred cccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-c-CCcEEEEecCeeeecCCC
Q psy7538 183 VLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-L-GMPCMILRPSIVVPIYKE 260 (543)
Q Consensus 183 ~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~-~lp~~IlRps~V~G~~~~ 260 (543)
+++|+....| ..+.|+.||+.+|++++.++. . +++++++||++|||+...
T Consensus 135 ~~~e~~~~~~----------------------------~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~ 186 (338)
T 1udb_A 135 PYVESFPTGT----------------------------PQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPS 186 (338)
T ss_dssp SBCTTSCCCC----------------------------CSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTT
T ss_pred CcCcccCCCC----------------------------CCChHHHHHHHHHHHHHHHHHhcCCCceEEEeeceecCCCcc
Confidence 4555432211 117999999999999998776 4 799999999999998543
Q ss_pred CCCCCCCC--CCchHHHHHHHh--cCceeEEee------cCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeec
Q psy7538 261 PLPGWTDN--INGPTGLLIGAG--KGVIRSMYC------KNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTS 330 (543)
Q Consensus 261 p~~gw~d~--~~g~~~~~~~~~--~g~~~~~~~------~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s 330 (543)
...|..+. .......+.... .+....+.+ ++++.+|+|||+|+|++++.++..... . ..+++||+++
T Consensus 187 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~-~--~~~~~yni~~ 263 (338)
T 1udb_A 187 GDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLAN-K--PGVHIYNLGA 263 (338)
T ss_dssp SSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTT-C--CEEEEEEESC
T ss_pred cccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHHHHHHHHHHHHhhhhc-c--CCCcEEEecC
Confidence 22221111 011222333333 233333444 567889999999999999998876421 0 1247999999
Q ss_pred CCCCcccHHHHHHHHhhhhcCccC
Q psy7538 331 NKDYKITWQEICDIGKDIVTSKIP 354 (543)
Q Consensus 331 ~~~~~~t~~e~~~~i~~~~G~~~p 354 (543)
+ +++|+.|+++.+.+.+|.+.|
T Consensus 264 ~--~~~s~~e~~~~i~~~~g~~~~ 285 (338)
T 1udb_A 264 G--VGNSVLDVVNAFSKACGKPVN 285 (338)
T ss_dssp S--CCEEHHHHHHHHHHHHTSCCC
T ss_pred C--CceeHHHHHHHHHHHhCCCCc
Confidence 8 889999999999999965443
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-32 Score=287.07 Aligned_cols=266 Identities=19% Similarity=0.219 Sum_probs=192.0
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+|+|||||||||||++|+++|++.|+ +|++++|+.......+++.+.++...-+.+. .....++.++.||+++
T Consensus 69 ~~~vlVTGatG~iG~~l~~~L~~~g~---~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~----~~~~~~v~~v~~Dl~d 141 (427)
T 4f6c_A 69 LGNTLLTGATGFLGAYLIEALQGYSH---RIYCFIRADNEEIAWYKLMTNLNDYFSEETV----EMMLSNIEVIVGDFEC 141 (427)
T ss_dssp CEEEEEECTTSHHHHHHHHHHTTTEE---EEEEEEECSSHHHHHHHHHHHHHHHSCHHHH----HHHHTTEEEEEECC--
T ss_pred CCEEEEecCCcHHHHHHHHHHHcCCC---EEEEEECCCChHHHHHHHHHHHHHhcccccc----ccccCceEEEeCCCCC
Confidence 56999999999999999999988875 8999999876544556665543321000001 1123589999999999
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccC-------CC
Q psy7538 110 LKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPS-------EK 182 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~-------~~ 182 (543)
++ .+. ...++|+|||+||......++...+++|+.|+.+++++|++ +.++|||+||.++ +. ..
T Consensus 142 ~~------~l~-~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~--~~~~~v~~SS~~~-G~~~~~~~~~~ 211 (427)
T 4f6c_A 142 MD------DVV-LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ--HHARLIYVSTISV-GTYFDIDTEDV 211 (427)
T ss_dssp -C------CCC-CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH--TTCEEEEEEEGGG-GSEECSSCSCC
T ss_pred cc------cCC-CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh--cCCcEEEECchHh-CCCccCCCCCc
Confidence 54 222 66789999999999887777888999999999999999998 6789999999988 33 12
Q ss_pred cccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCC
Q psy7538 183 VLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPL 262 (543)
Q Consensus 183 ~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~ 262 (543)
+++|+....+.. ..+.|+.||+.+|.+++.+.+.|++++++||+.|||+...+.
T Consensus 212 ~~~E~~~~~~~~--------------------------~~~~Y~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~ 265 (427)
T 4f6c_A 212 TFSEADVYKGQL--------------------------LTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRW 265 (427)
T ss_dssp EECTTCSCSSCC--------------------------CCSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCC
T ss_pred cccccccccCCC--------------------------CCCchHHHHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCc
Confidence 455543322111 238999999999999998765699999999999999976531
Q ss_pred CCCCCCCC--chHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHH
Q psy7538 263 PGWTDNIN--GPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQE 340 (543)
Q Consensus 263 ~gw~d~~~--g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e 340 (543)
|..+.. ....++..+..+.... .++++..++++|+||+|++++.++..... +++||++++ ++++|.|
T Consensus 266 --~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~v~DvA~ai~~~~~~~~~------g~~~~l~~~--~~~s~~e 334 (427)
T 4f6c_A 266 --HMRNIKTNRFSMVMNDLLQLDCIG-VSMAEMPVDFSFVDTTARQIVALAQVNTP------QIIYHVLSP--NKMPVKS 334 (427)
T ss_dssp --CCTTGGGCHHHHHHHHHHHSSEEE-HHHHTCEECCEEHHHHHHHHHHHTTSCCC------CSEEEESCS--CCEEHHH
T ss_pred --cccCcchHHHHHHHHHHHhcCCCC-CccccceEEEeeHHHHHHHHHHHHcCCCC------CCEEEecCC--CCCcHHH
Confidence 111211 1234555555554433 24568999999999999999999876543 789999998 8999999
Q ss_pred HHHHHhhhhc
Q psy7538 341 ICDIGKDIVT 350 (543)
Q Consensus 341 ~~~~i~~~~G 350 (543)
+++.+.+ +|
T Consensus 335 l~~~i~~-~g 343 (427)
T 4f6c_A 335 LLECVKR-KE 343 (427)
T ss_dssp HHHHHHS-SC
T ss_pred HHHHHHH-cC
Confidence 9999998 53
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-31 Score=272.40 Aligned_cols=253 Identities=21% Similarity=0.225 Sum_probs=193.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|||||||||||++|+++|++.|+ +|+++.|...+.. +.+..+ ....++.++.+|+
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~--~~~~~~---------------~~~~~~~~~~~D~ 84 (343)
T 2b69_A 25 KDRKRILITGGAGFVGSHLTDKLMMDGH---EVTVVDNFFTGRK--RNVEHW---------------IGHENFELINHDV 84 (343)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSSCCG--GGTGGG---------------TTCTTEEEEECCT
T ss_pred cCCCEEEEEcCccHHHHHHHHHHHHCCC---EEEEEeCCCccch--hhhhhh---------------ccCCceEEEeCcc
Confidence 5789999999999999999999999986 8899999754321 111000 0124788999999
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCccCCC---cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC--C
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAATIRF---DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE--K 182 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~--~ 182 (543)
.++. +.++|+|||+||.... .......+++|+.|+.+++++|++. ++ +|||+||+.+++.. .
T Consensus 85 ~~~~-----------~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~v~g~~~~~ 151 (343)
T 2b69_A 85 VEPL-----------YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV-GA-RLLLASTSEVYGDPEVH 151 (343)
T ss_dssp TSCC-----------CCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-TC-EEEEEEEGGGGBSCSSS
T ss_pred CChh-----------hcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CC-cEEEECcHHHhCCCCCC
Confidence 9864 3579999999997653 2456678999999999999999997 55 99999999776543 3
Q ss_pred cccccccCC--CCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCC
Q psy7538 183 VLEERTYLP--PDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYK 259 (543)
Q Consensus 183 ~i~E~~y~~--p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~ 259 (543)
+++|+.+.. |..| .+.|+.+|+.+|+++..+.. .+++++++||+.|||+..
T Consensus 152 ~~~E~~~~~~~~~~~--------------------------~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~ 205 (343)
T 2b69_A 152 PQSEDYWGHVNPIGP--------------------------RACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRM 205 (343)
T ss_dssp SBCTTCCCBCCSSST--------------------------THHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTC
T ss_pred CCcccccccCCCCCC--------------------------CCchHHHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCC
Confidence 566653321 1111 16899999999999988765 689999999999999976
Q ss_pred CCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHH
Q psy7538 260 EPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQ 339 (543)
Q Consensus 260 ~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~ 339 (543)
.+..+ .....++..+..|....++++++..++++|++|+|++++.++... .+++||++++ +++|+.
T Consensus 206 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~-------~~~~~~i~~~--~~~s~~ 271 (343)
T 2b69_A 206 HMNDG-----RVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN-------VSSPVNLGNP--EEHTIL 271 (343)
T ss_dssp CTTCC-----CHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSS-------CCSCEEESCC--CEEEHH
T ss_pred CCCcc-----cHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhcC-------CCCeEEecCC--CCCcHH
Confidence 43211 112345566667776667888999999999999999999887543 2568999998 899999
Q ss_pred HHHHHHhhhhcCcc
Q psy7538 340 EICDIGKDIVTSKI 353 (543)
Q Consensus 340 e~~~~i~~~~G~~~ 353 (543)
|+++.+.+.+|.+.
T Consensus 272 e~~~~i~~~~g~~~ 285 (343)
T 2b69_A 272 EFAQLIKNLVGSGS 285 (343)
T ss_dssp HHHHHHHHHHTCCC
T ss_pred HHHHHHHHHhCCCC
Confidence 99999999996553
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-31 Score=271.46 Aligned_cols=245 Identities=20% Similarity=0.259 Sum_probs=190.3
Q ss_pred chhhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceE
Q psy7538 22 DRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQ 101 (543)
Q Consensus 22 ~~i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~ 101 (543)
++-++.+++|+|||||||||||++|+++|++.|+ +|++++|....... . .....++.
T Consensus 12 ~~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~------~--------------~~~l~~v~ 68 (330)
T 2pzm_A 12 SGLVPRGSHMRILITGGAGCLGSNLIEHWLPQGH---EILVIDNFATGKRE------V--------------LPPVAGLS 68 (330)
T ss_dssp --CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTC---EEEEEECCSSSCGG------G--------------SCSCTTEE
T ss_pred cCCcccCCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCCccchh------h--------------hhccCCce
Confidence 4445678899999999999999999999999986 89999996543210 0 01125788
Q ss_pred EEEccCCCCCCCCCHHHHHHHhc--CccEEEEcCccCCCc--ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCcc
Q psy7538 102 VISGDITQLKLGISEIDKKELID--NVDIVYHVAATIRFD--EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYC 177 (543)
Q Consensus 102 ~i~gDl~~~~lgls~~~~~~l~~--~vd~ViH~AA~v~~~--~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~ 177 (543)
++.+|+++++ ++..+++ ++|+|||+||..... +... +++|+.|+.+++++|.+. ++++|||+||..+
T Consensus 69 ~~~~Dl~d~~------~~~~~~~~~~~D~vih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~-~~~~iV~~SS~~~ 139 (330)
T 2pzm_A 69 VIEGSVTDAG------LLERAFDSFKPTHVVHSAAAYKDPDDWAED--AATNVQGSINVAKAASKA-GVKRLLNFQTALC 139 (330)
T ss_dssp EEECCTTCHH------HHHHHHHHHCCSEEEECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHH-TCSEEEEEEEGGG
T ss_pred EEEeeCCCHH------HHHHHHhhcCCCEEEECCccCCCccccChh--HHHHHHHHHHHHHHHHHc-CCCEEEEecCHHH
Confidence 9999999875 7888888 999999999987542 2333 899999999999999987 7899999999977
Q ss_pred ccCCC----cccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCe
Q psy7538 178 HPSEK----VLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSI 253 (543)
Q Consensus 178 ~~~~~----~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~ 253 (543)
++... +++|+. .| .+.|+.||+.+|++++.+ +++++++||++
T Consensus 140 ~~~~~~~~~~~~E~~--~~-----------------------------~~~Y~~sK~~~e~~~~~~---~~~~~~iR~~~ 185 (330)
T 2pzm_A 140 YGRPATVPIPIDSPT--AP-----------------------------FTSYGISKTAGEAFLMMS---DVPVVSLRLAN 185 (330)
T ss_dssp GCSCSSSSBCTTCCC--CC-----------------------------CSHHHHHHHHHHHHHHTC---SSCEEEEEECE
T ss_pred hCCCccCCCCcCCCC--CC-----------------------------CChHHHHHHHHHHHHHHc---CCCEEEEeeee
Confidence 65432 444432 11 279999999999999887 79999999999
Q ss_pred eeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHH-HHHHHhhhhcccCCCCCCcEEEeecCC
Q psy7538 254 VVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAIN-GVFLFTWDFLNSKESERKSVCNLTSNK 332 (543)
Q Consensus 254 V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~-a~i~a~~~~~~~~~~~~~~vyni~s~~ 332 (543)
+||++.. . .....++..+..|. .+++++. ..++++++|+|+ +++.++... . +++||++++
T Consensus 186 v~gp~~~--~------~~~~~~~~~~~~~~--~~~~~~~-~~~~i~~~Dva~~a~~~~~~~~------~-g~~~~v~~~- 246 (330)
T 2pzm_A 186 VTGPRLA--I------GPIPTFYKRLKAGQ--KCFCSDT-VRDFLDMSDFLAIADLSLQEGR------P-TGVFNVSTG- 246 (330)
T ss_dssp EECTTCC--S------SHHHHHHHHHHTTC--CCCEESC-EECEEEHHHHHHHHHHHTSTTC------C-CEEEEESCS-
T ss_pred eECcCCC--C------CHHHHHHHHHHcCC--EEeCCCC-EecceeHHHHHHHHHHHHhhcC------C-CCEEEeCCC-
Confidence 9998631 0 11123445555565 3456677 899999999999 998887652 1 679999998
Q ss_pred CCcccHHHHHHHHhhhhcCc
Q psy7538 333 DYKITWQEICDIGKDIVTSK 352 (543)
Q Consensus 333 ~~~~t~~e~~~~i~~~~G~~ 352 (543)
.++|+.|+++.+.+.+|.+
T Consensus 247 -~~~s~~e~~~~i~~~~g~~ 265 (330)
T 2pzm_A 247 -EGHSIKEVFDVVLDYVGAT 265 (330)
T ss_dssp -CCEEHHHHHHHHHHHHTCC
T ss_pred -CCCCHHHHHHHHHHHhCCC
Confidence 8899999999999999665
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-31 Score=272.30 Aligned_cols=255 Identities=17% Similarity=0.107 Sum_probs=194.9
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|||||||||||++|+++|++.|+ +|++++|+...... ++++++ . ...++.++.+|+
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~G~---~V~~~~r~~~~~~~-~~~~~~--------------~-~~~~~~~~~~Dl 61 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEKGY---EVYGADRRSGEFAS-WRLKEL--------------G-IENDVKIIHMDL 61 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEECSCCSTTTT-HHHHHT--------------T-CTTTEEECCCCT
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEECCCccccc-ccHhhc--------------c-ccCceeEEECCC
Confidence 3679999999999999999999999986 89999998654321 233221 1 124688999999
Q ss_pred CCCCCCCCHHHHHHHhcC--ccEEEEcCccCCC---cccHHHHHHHHHHHHHHHHHHHHhccCC-ceEEEEecCccccCC
Q psy7538 108 TQLKLGISEIDKKELIDN--VDIVYHVAATIRF---DEPIKTAVILNTRGTRDMLELSKQMKNL-KCFTYISTAYCHPSE 181 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~--vd~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l-~~~V~vST~y~~~~~ 181 (543)
++++ ++..++++ +|+|||+||.... .+.....+++|+.|+.+++++|+++ ++ ++|||+||.++++..
T Consensus 62 ~d~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~~~~iv~~SS~~vyg~~ 134 (345)
T 2z1m_A 62 LEFS------NIIRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTV-KPDTKFYQASTSEMFGKV 134 (345)
T ss_dssp TCHH------HHHHHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTCEEEEEEEGGGGCSC
T ss_pred CCHH------HHHHHHHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEEechhhcCCC
Confidence 9865 78888775 6999999997653 2456778999999999999999987 66 899999999766543
Q ss_pred --CcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecC
Q psy7538 182 --KVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIY 258 (543)
Q Consensus 182 --~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~ 258 (543)
.+++|+....|. +.|+.||+.+|.+++.+.. .+++++++|+.++||++
T Consensus 135 ~~~~~~e~~~~~~~-----------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg 185 (345)
T 2z1m_A 135 QEIPQTEKTPFYPR-----------------------------SPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPL 185 (345)
T ss_dssp SSSSBCTTSCCCCC-----------------------------SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTT
T ss_pred CCCCCCccCCCCCC-----------------------------ChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCC
Confidence 245555333222 7999999999999998876 68999999999999985
Q ss_pred CCCCCCCCCCCCc--hHHHHHHHhcCce-eEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCc
Q psy7538 259 KEPLPGWTDNING--PTGLLIGAGKGVI-RSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYK 335 (543)
Q Consensus 259 ~~p~~gw~d~~~g--~~~~~~~~~~g~~-~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~ 335 (543)
.. ++... ...++..+..|.. ....++++..++++|++|+|++++.++.... +++||++++ ++
T Consensus 186 ~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~~~-------~~~~~i~~~--~~ 250 (345)
T 2z1m_A 186 RG------IEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQPE-------PDDYVIATG--ET 250 (345)
T ss_dssp SC------TTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHTSSS-------CCCEEECCS--CC
T ss_pred CC------CcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhCCC-------CceEEEeCC--CC
Confidence 32 22111 1123334445543 3356788899999999999999999886532 368999998 89
Q ss_pred ccHHHHHHHHhhhhcCc
Q psy7538 336 ITWQEICDIGKDIVTSK 352 (543)
Q Consensus 336 ~t~~e~~~~i~~~~G~~ 352 (543)
+|+.|+++.+.+.+|.+
T Consensus 251 ~s~~e~~~~i~~~~g~~ 267 (345)
T 2z1m_A 251 HTVREFVEKAAKIAGFD 267 (345)
T ss_dssp EEHHHHHHHHHHHTTCC
T ss_pred ccHHHHHHHHHHHhCCC
Confidence 99999999999999665
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-31 Score=277.05 Aligned_cols=249 Identities=17% Similarity=0.215 Sum_probs=191.7
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhC-CCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLE-PNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g-~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
+++|+|||||||||||++|+++|++.| + +|+++.|...... + . ...++. +.+|
T Consensus 44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~---~V~~~~r~~~~~~----~-----------------~-~~~~~~-~~~d 97 (357)
T 2x6t_A 44 IEGRMIIVTGGAGFIGSNIVKALNDKGIT---DILVVDNLKDGTK----F-----------------V-NLVDLN-IADY 97 (357)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCC---CEEEEECCSSGGG----G-----------------G-GTTTSC-CSEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCc---EEEEEecCCCcch----h-----------------h-cccCce-Eeee
Confidence 567999999999999999999999998 5 7888988764311 0 0 001222 6788
Q ss_pred CCCCCCCCCHHHHHHHhc-----CccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccC
Q psy7538 107 ITQLKLGISEIDKKELID-----NVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPS 180 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~-----~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~ 180 (543)
+++++ .++.+++ ++|+|||+||.... .+.....+++|+.|+.+++++|++. ++ +|||+||..+++.
T Consensus 98 ~~~~~------~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~-~~-r~V~~SS~~v~g~ 169 (357)
T 2x6t_A 98 MDKED------FLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAATYGG 169 (357)
T ss_dssp EEHHH------HHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TC-CEEEEEEGGGGCS
T ss_pred cCcHH------HHHHHHhhcccCCCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEcchHHhCC
Confidence 88764 6777776 59999999998764 3557789999999999999999997 77 9999999977654
Q ss_pred CC--cccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeec
Q psy7538 181 EK--VLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPI 257 (543)
Q Consensus 181 ~~--~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~ 257 (543)
.. +++|+..+.|. +.|+.+|+.+|+++..+.. .+++++++||+.|||+
T Consensus 170 ~~~~~~~E~~~~~p~-----------------------------~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp 220 (357)
T 2x6t_A 170 RTSDFIESREYEKPL-----------------------------NVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGP 220 (357)
T ss_dssp CSSCCCSSGGGCCCS-----------------------------SHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESS
T ss_pred CCCCCcCCcCCCCCC-----------------------------ChhHHHHHHHHHHHHHHHHHcCCCEEEEecCeEECC
Confidence 32 56666433332 7999999999999999876 6899999999999999
Q ss_pred CCCCCCCCCCCCCc-hHHHHHHHhcCceeEEeecCCc-ccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCc
Q psy7538 258 YKEPLPGWTDNING-PTGLLIGAGKGVIRSMYCKNTG-MADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYK 335 (543)
Q Consensus 258 ~~~p~~gw~d~~~g-~~~~~~~~~~g~~~~~~~~~~~-~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~ 335 (543)
...+.. +..+ ...++..+..|....++++++. .++++|++|+|++++.++.... +++||++++ ++
T Consensus 221 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~-------~~~~~i~~~--~~ 287 (357)
T 2x6t_A 221 REGHKG----SMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV-------SGIFNLGTG--RA 287 (357)
T ss_dssp SCTTCG----GGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHHHCC-------CEEEEESCS--CC
T ss_pred CCCCCc----ccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHhcCC-------CCeEEecCC--Cc
Confidence 764311 0111 2235566667766666778888 9999999999999999886532 569999998 88
Q ss_pred ccHHHHHHHHhhhhcCc
Q psy7538 336 ITWQEICDIGKDIVTSK 352 (543)
Q Consensus 336 ~t~~e~~~~i~~~~G~~ 352 (543)
+|+.|+++.+.+.+|.+
T Consensus 288 ~s~~e~~~~i~~~~g~~ 304 (357)
T 2x6t_A 288 ESFQAVADATLAYHKKG 304 (357)
T ss_dssp EEHHHHHHHHHHHHTCC
T ss_pred ccHHHHHHHHHHHcCCC
Confidence 99999999999999654
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.98 E-value=2.1e-31 Score=287.87 Aligned_cols=265 Identities=19% Similarity=0.207 Sum_probs=193.0
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
.|+|||||||||||++|+++|++.|+ +|++++|+.......+|+.+.++...-..+. .....+++++.||+++
T Consensus 150 ~~~VLVTGatG~iG~~l~~~L~~~g~---~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~----~~~~~~v~~v~~Dl~d 222 (508)
T 4f6l_B 150 LGNTLLTGATGFLGAYLIEALQGYSH---RIYCFIRADNEEIAWYKLMTNLNDYFSEETV----EMMLSNIEVIVGDFEC 222 (508)
T ss_dssp CEEEEESCTTSHHHHHHHHHTBTTEE---EEEEEEESSSHHHHHHHHHHHHHHHSCHHHH----HHHSTTEEEEEEBTTB
T ss_pred CCeEEEECCccchHHHHHHHHHhcCC---EEEEEECCCChHHHHHHHHHHHHHhcccccc----hhccCceEEEecCCcc
Confidence 57999999999999999999988775 8999999986554556665433221000011 1123689999999999
Q ss_pred -CCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccC-------C
Q psy7538 110 -LKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPS-------E 181 (543)
Q Consensus 110 -~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~-------~ 181 (543)
+.++ +..++|+|||+||.+++..++....++|+.|+.+++++|++ +.++|||+||.++ +. .
T Consensus 223 ~~~l~--------~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~--~~~~~v~iSS~~v-G~~~~~~~~~ 291 (508)
T 4f6l_B 223 MDDVV--------LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ--HHARLIYVSTISV-GTYFDIDTED 291 (508)
T ss_dssp CSSCC--------CSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT--TTCEEEEEEESCT-TSEECTTCSC
T ss_pred cccCC--------CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh--CCCcEEEeCChhh-ccCCccCCcC
Confidence 4443 66799999999999988778888999999999999999998 5689999999988 32 1
Q ss_pred CcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCC
Q psy7538 182 KVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEP 261 (543)
Q Consensus 182 ~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p 261 (543)
.+++|+....+. ...+.|+.||+.+|+++..+.+.|++++|+||+.|||+...+
T Consensus 292 ~~~~E~~~~~~~--------------------------~~~~~Y~~sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~~ 345 (508)
T 4f6l_B 292 VTFSEADVYKGQ--------------------------LLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGR 345 (508)
T ss_dssp CEECTTCSCSSB--------------------------CCCSHHHHHHHHHHHHHHHHHHTTCEEEEEEECCEESCSSSC
T ss_pred cccccccccccc--------------------------cCCCcHHHHHHHHHHHHHHHHHcCCCEEEEecceeccCCCCC
Confidence 234444321111 123899999999999999876569999999999999997643
Q ss_pred CCCCCCCCC--chHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHH
Q psy7538 262 LPGWTDNIN--GPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQ 339 (543)
Q Consensus 262 ~~gw~d~~~--g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~ 339 (543)
. +..|.. ....++..+..+.... .++++..++++||||+|++++.++..... +++||++++ ++++|.
T Consensus 346 ~--~~~~~~~~~~~~~i~~~~~~~~~~-~~~g~~~~~~v~v~DvA~ai~~~~~~~~~------~~~~nl~~~--~~~s~~ 414 (508)
T 4f6l_B 346 W--HMRNIKTNRFSMVMNDLLQLDCIG-VSMAEMPVDFSFVDTTARQIVALAQVNTP------QIIYHVLSP--NKMPVK 414 (508)
T ss_dssp C--CCTTCTTCHHHHHHHHHTTCSEEE-TTGGGSEEECEEHHHHHHHHHHHTTBCCS------CSEEEESCS--CEEEHH
T ss_pred c--ccCCcchHHHHHHHHHHHHcCCCC-CCccCceEEEEcHHHHHHHHHHHHhCCCC------CCEEEeCCC--CCCCHH
Confidence 1 111211 1234555555554433 24468899999999999999999876543 789999999 899999
Q ss_pred HHHHHHhhhh
Q psy7538 340 EICDIGKDIV 349 (543)
Q Consensus 340 e~~~~i~~~~ 349 (543)
|+++.+.+..
T Consensus 415 el~~~i~~~~ 424 (508)
T 4f6l_B 415 SLLECVKRKE 424 (508)
T ss_dssp HHHHHHHSSC
T ss_pred HHHHHHHHcC
Confidence 9999998753
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.6e-31 Score=271.23 Aligned_cols=258 Identities=19% Similarity=0.236 Sum_probs=173.7
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEec-CCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMR-TKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R-~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
||+|||||||||||++|+++|++.|+ +|++++| +.......+.+.++ +....++.++.+|++
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~---~V~~~~r~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~Dl~ 63 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGY---SVNTTIRADPERKRDVSFLTNL--------------PGASEKLHFFNADLS 63 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC---EEEEECCCC----CCCHHHHTS--------------TTHHHHEEECCCCTT
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCC---EEEEEEeCCccchhHHHHHHhh--------------hccCCceEEEecCCC
Confidence 68999999999999999999999987 7888888 43211101111100 111136788999999
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCccCCCcc--cHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccC----CC
Q psy7538 109 QLKLGISEIDKKELIDNVDIVYHVAATIRFDE--PIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPS----EK 182 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~--~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~----~~ 182 (543)
+++ +++.+++++|+|||+|+.+.+.. +.+..+++|+.||.+++++|++.+++++|||+||..+... ..
T Consensus 64 d~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~ 137 (322)
T 2p4h_X 64 NPD------SFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKD 137 (322)
T ss_dssp CGG------GGHHHHTTCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCS
T ss_pred CHH------HHHHHHcCCCEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCe
Confidence 876 78899999999999998764322 2345889999999999999998646899999999864321 12
Q ss_pred cccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCc-hHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCC
Q psy7538 183 VLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPN-SYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKE 260 (543)
Q Consensus 183 ~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn-~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~ 260 (543)
+++|+.... . +......| ++ .|+.||+++|+++.++.+ ++++++++||+.|||+...
T Consensus 138 ~~~e~~~~~---~------------~~~~~~~p------~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~ 196 (322)
T 2p4h_X 138 VLDESDWSD---V------------DLLRSVKP------FGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVC 196 (322)
T ss_dssp EECTTCCCC---H------------HHHHHHCC------TTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCS
T ss_pred ecCCccccc---h------------hhhcccCc------ccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCC
Confidence 344542211 0 00000011 12 699999999999988776 6999999999999999654
Q ss_pred CCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHH
Q psy7538 261 PLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQE 340 (543)
Q Consensus 261 p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e 340 (543)
+. .......+.....|....+ +. ...+++|++|+|++++.++..... .+ .|| +++ .++|+.|
T Consensus 197 ~~------~~~~~~~~~~~~~g~~~~~-~~--~~~~~i~v~Dva~a~~~~~~~~~~-----~g-~~~-~~~--~~~s~~e 258 (322)
T 2p4h_X 197 PK------LPDSIEKALVLVLGKKEQI-GV--TRFHMVHVDDVARAHIYLLENSVP-----GG-RYN-CSP--FIVPIEE 258 (322)
T ss_dssp SS------CCHHHHHHTHHHHSCGGGC-CE--EEEEEEEHHHHHHHHHHHHHSCCC-----CE-EEE-CCC--EEEEHHH
T ss_pred CC------CCchHHHHHHHHhCCCccC-cC--CCcCEEEHHHHHHHHHHHhhCcCC-----CC-CEE-EcC--CCCCHHH
Confidence 31 1111111112233332211 22 234899999999999998865332 24 599 555 7899999
Q ss_pred HHHHHhhhh
Q psy7538 341 ICDIGKDIV 349 (543)
Q Consensus 341 ~~~~i~~~~ 349 (543)
+++.+.+..
T Consensus 259 ~~~~i~~~~ 267 (322)
T 2p4h_X 259 MSQLLSAKY 267 (322)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhC
Confidence 999998876
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.98 E-value=5.9e-31 Score=269.53 Aligned_cols=259 Identities=14% Similarity=0.156 Sum_probs=195.8
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCC----cCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEE
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPN----VKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQV 102 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~----v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~ 102 (543)
++++|+|||||||||||++|+++|++.|+. +.+|+++.|...... .....++.+
T Consensus 11 ~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~----------------------~~~~~~~~~ 68 (342)
T 2hrz_A 11 YFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAP----------------------AGFSGAVDA 68 (342)
T ss_dssp CCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCC----------------------TTCCSEEEE
T ss_pred CccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccc----------------------cccCCceeE
Confidence 468899999999999999999999999820 027899999764321 112347889
Q ss_pred EEccCCCCCCCCCHHHHHHHh-cCccEEEEcCccCCC--cccHHHHHHHHHHHHHHHHHHHHhcc----CCceEEEEecC
Q psy7538 103 ISGDITQLKLGISEIDKKELI-DNVDIVYHVAATIRF--DEPIKTAVILNTRGTRDMLELSKQMK----NLKCFTYISTA 175 (543)
Q Consensus 103 i~gDl~~~~lgls~~~~~~l~-~~vd~ViH~AA~v~~--~~~~~~~~~~Nv~gt~~ll~~a~~~~----~l~~~V~vST~ 175 (543)
+.+|+++++ ++..++ .++|+|||+||.... .+.+...+++|+.|+.+++++|++.+ ++++|||+||.
T Consensus 69 ~~~Dl~d~~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~ 142 (342)
T 2hrz_A 69 RAADLSAPG------EAEKLVEARPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSI 142 (342)
T ss_dssp EECCTTSTT------HHHHHHHTCCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEG
T ss_pred EEcCCCCHH------HHHHHHhcCCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCch
Confidence 999999986 788887 489999999997642 24567789999999999999999873 28999999999
Q ss_pred ccccCC--CcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecC
Q psy7538 176 YCHPSE--KVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPS 252 (543)
Q Consensus 176 y~~~~~--~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps 252 (543)
.+++.. .+++|+..+.|. +.|+.||+.+|+++..+.. .+++.+++|++
T Consensus 143 ~~~~~~~~~~~~E~~~~~~~-----------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~ 193 (342)
T 2hrz_A 143 AVFGAPLPYPIPDEFHTTPL-----------------------------TSYGTQKAICELLLSDYSRRGFFDGIGIRLP 193 (342)
T ss_dssp GGCCSSCCSSBCTTCCCCCS-----------------------------SHHHHHHHHHHHHHHHHHHTTSCEEEEEEEC
T ss_pred HhhCCCCCCCcCCCCCCCCc-----------------------------chHHHHHHHHHHHHHHHHHhcCCCceeEEee
Confidence 776643 356666443332 7999999999999998876 57999999999
Q ss_pred eeeecCCCCCCCCCCCCC-c-hHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeec
Q psy7538 253 IVVPIYKEPLPGWTDNIN-G-PTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTS 330 (543)
Q Consensus 253 ~V~G~~~~p~~gw~d~~~-g-~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s 330 (543)
.|||. ||+.++.. . ...++.....|....++++++...+++|++|+|++++.++..... . ...+++||++
T Consensus 194 ~v~g~-----pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~~~~~~~~~~-~-~~~~~~~ni~- 265 (342)
T 2hrz_A 194 TICIR-----PGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGFLIHGAMIDVE-K-VGPRRNLSMP- 265 (342)
T ss_dssp EETTC-----CSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHHHHHHHHSCHH-H-HCSCCEEECC-
T ss_pred eEEec-----CCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHHHHHHHHhcccc-c-cCCccEEEcC-
Confidence 99983 12222211 1 123455566676655666677788899999999999998875421 0 0026799995
Q ss_pred CCCCcccHHHHHHHHhhhhcCc
Q psy7538 331 NKDYKITWQEICDIGKDIVTSK 352 (543)
Q Consensus 331 ~~~~~~t~~e~~~~i~~~~G~~ 352 (543)
+ .++|+.|+++.+.+.+|.+
T Consensus 266 g--~~~s~~e~~~~i~~~~g~~ 285 (342)
T 2hrz_A 266 G--LSATVGEQIEALRKVAGEK 285 (342)
T ss_dssp C--EEEEHHHHHHHHHHHHCHH
T ss_pred C--CCCCHHHHHHHHHHHcCcc
Confidence 5 6799999999999998554
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.98 E-value=3.8e-31 Score=296.73 Aligned_cols=330 Identities=17% Similarity=0.148 Sum_probs=220.0
Q ss_pred hhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCC-HHHHHHHHhcCchhHHHHhhcCcCCCCceEEE
Q psy7538 25 AKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKT-PNQRVEELFESPVFDALKTLRGKSILQKIQVI 103 (543)
Q Consensus 25 ~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~-~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i 103 (543)
...+++|+|||||||||||++|+++|++.|+ +|+++.|...... ..++++.+ ...++.++
T Consensus 6 ~~~~~~~~ilVTGatG~IG~~l~~~L~~~G~---~V~~~~r~~~~~~~~~~~l~~~----------------~~~~v~~v 66 (699)
T 1z45_A 6 QSESTSKIVLVTGGAGYIGSHTVVELIENGY---DCVVADNLSNSTYDSVARLEVL----------------TKHHIPFY 66 (699)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSSCCTHHHHHHHHH----------------HTSCCCEE
T ss_pred ccccCCCEEEEECCCCHHHHHHHHHHHHCcC---EEEEEECCCcchHHHHHHHhhc----------------cCCceEEE
Confidence 3456789999999999999999999999986 8899998764432 11222211 01367889
Q ss_pred EccCCCCCCCCCHHHHHHHhc--CccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccc
Q psy7538 104 SGDITQLKLGISEIDKKELID--NVDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCH 178 (543)
Q Consensus 104 ~gDl~~~~lgls~~~~~~l~~--~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~ 178 (543)
.+|+++++ ++..+++ ++|+|||+||..... +.....+++|+.|+.+++++|++. ++++|||+||++++
T Consensus 67 ~~Dl~d~~------~l~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~~~iV~~SS~~vy 139 (699)
T 1z45_A 67 EVDLCDRK------GLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-NVSKFVFSSSATVY 139 (699)
T ss_dssp ECCTTCHH------HHHHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGG
T ss_pred EcCCCCHH------HHHHHHHhCCCCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEECcHHHh
Confidence 99999875 7888887 899999999986532 234568999999999999999987 78999999999776
Q ss_pred cCC------CcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh---cCCcEEEE
Q psy7538 179 PSE------KVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME---LGMPCMIL 249 (543)
Q Consensus 179 ~~~------~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~---~~lp~~Il 249 (543)
+.. .+++|+....|. +.|+.||+.+|++++.+.. .+++++|+
T Consensus 140 g~~~~~~~~~~~~E~~~~~p~-----------------------------~~Y~~sK~~~E~~~~~~~~~~~~g~~~~il 190 (699)
T 1z45_A 140 GDATRFPNMIPIPEECPLGPT-----------------------------NPYGHTKYAIENILNDLYNSDKKSWKFAIL 190 (699)
T ss_dssp CCGGGSTTCCSBCTTSCCCCC-----------------------------SHHHHHHHHHHHHHHHHHHHSTTSCEEEEE
T ss_pred CCCccccccCCccccCCCCCC-----------------------------ChHHHHHHHHHHHHHHHHHhccCCCcEEEE
Confidence 543 234444322222 7999999999999988753 38999999
Q ss_pred ecCeeeecCCCCCCCCCCC--CCchHHHHHHHhcC--ceeEEee------cCCcccccchHHHHHHHHHHHhhhhccc-C
Q psy7538 250 RPSIVVPIYKEPLPGWTDN--INGPTGLLIGAGKG--VIRSMYC------KNTGMADFLPADVAINGVFLFTWDFLNS-K 318 (543)
Q Consensus 250 Rps~V~G~~~~p~~gw~d~--~~g~~~~~~~~~~g--~~~~~~~------~~~~~~d~V~vddva~a~i~a~~~~~~~-~ 318 (543)
||+.|||+....+.|--+. .......+.....+ ....+++ ++++.+++|||+|+|++++.++...... .
T Consensus 191 R~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~ 270 (699)
T 1z45_A 191 RYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNE 270 (699)
T ss_dssp EECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCT
T ss_pred EeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCeeEeeEEHHHHHHHHHHHHhhhhcccc
Confidence 9999999864322111000 01122334444433 2333444 6788999999999999999988753210 0
Q ss_pred CCCCCcEEEeecCCCCcccHHHHHHHHhhhhcCccCCCCccccCccccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCC
Q psy7538 319 ESERKSVCNLTSNKDYKITWQEICDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFICCLLFHWIPAYFLDAVILISGNK 398 (543)
Q Consensus 319 ~~~~~~vyni~s~~~~~~t~~e~~~~i~~~~G~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~d~~~~~~G~k 398 (543)
....+++||++++ +++|+.|+++.+.+.+|.+.|.......+.. . .. .....+.+.+.+||+
T Consensus 271 ~~~~~~~yni~~~--~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~-~-~~--------------~~~d~~ka~~~LG~~ 332 (699)
T 1z45_A 271 NEGLCREWNLGSG--KGSTVFEVYHAFCKASGIDLPYKVTGRRAGD-V-LN--------------LTAKPDRAKRELKWQ 332 (699)
T ss_dssp TCCEEEEEEESCS--CCEEHHHHHHHHHHHHTCCCCC----------C-CC--------------CCBCCHHHHHHTCCC
T ss_pred ccCCceEEEECCC--CCCcHHHHHHHHHHHhCCCCCceecCCCCCc-c-cc--------------ccCCHHHHHHhcCCC
Confidence 0012579999998 8899999999999999665443211100000 0 00 011134556789999
Q ss_pred chhhHHHHHHHHhhccccccccCeEEEeCccHH
Q psy7538 399 PCLVRIQERIHRGFDVFEYYANNEWEFKNGNLH 431 (543)
Q Consensus 399 P~~~~~~~~l~~~~~~~~~f~~~~w~f~~~n~~ 431 (543)
|+.. +.+.+. ++++||..+.+.|...+..
T Consensus 333 p~~~-l~egl~---~~~~w~~~~~~~~~~~~~~ 361 (699)
T 1z45_A 333 TELQ-VEDSCK---DLWKWTTENPFGYQLRGVE 361 (699)
T ss_dssp CCCC-HHHHHH---HHHHHHHHCTTCSCCTTEE
T ss_pred CCCC-HHHHHH---HHHHHHHhCCcchhhhhee
Confidence 9874 444443 4456776666666665533
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-31 Score=269.74 Aligned_cols=245 Identities=17% Similarity=0.208 Sum_probs=176.9
Q ss_pred EEEEEcCcchhHHHHHHHHHhhC-CCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 32 SIFLSGGSGFLGKVLIEKILRLE-PNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 32 ~VlITGatGFiG~~Lv~~Ll~~g-~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
+|||||||||||++|+++|++.| + +|+++.|...... .+.+ + ++. +.+|++++
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~---~V~~~~r~~~~~~-~~~~-----------------~----~~~-~~~d~~~~ 54 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGIT---DILVVDNLKDGTK-FVNL-----------------V----DLN-IADYMDKE 54 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCC---CEEEEECCSSGGG-GHHH-----------------H----TSC-CSEEEEHH
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCc---EEEEEccCCCCch-hhhc-----------------C----cce-eccccccH
Confidence 58999999999999999999998 5 7888988764321 0111 1 122 67888876
Q ss_pred CCCCCHHHHHHHhcC-----ccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCC--
Q psy7538 111 KLGISEIDKKELIDN-----VDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEK-- 182 (543)
Q Consensus 111 ~lgls~~~~~~l~~~-----vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~-- 182 (543)
+ .++.++++ +|+|||+||.... .......+++|+.|+.+++++|++. ++ +|||+||.++++...
T Consensus 55 ~------~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~v~g~~~~~ 126 (310)
T 1eq2_A 55 D------FLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAATYGGRTSD 126 (310)
T ss_dssp H------HHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TC-CEEEEEEGGGGTTCCSC
T ss_pred H------HHHHHHhccccCCCcEEEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEeeHHHhCCCCCC
Confidence 4 67888875 9999999998754 3557788999999999999999998 77 999999997765433
Q ss_pred cccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCCC
Q psy7538 183 VLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKEP 261 (543)
Q Consensus 183 ~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~p 261 (543)
+++|+..+.|. +.|+.+|..+|+++..+.. .+++++++||+.|||+...+
T Consensus 127 ~~~E~~~~~p~-----------------------------~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~ 177 (310)
T 1eq2_A 127 FIESREYEKPL-----------------------------NVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGH 177 (310)
T ss_dssp BCSSGGGCCCS-----------------------------SHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGG
T ss_pred CCCCCCCCCCC-----------------------------ChhHHHHHHHHHHHHHHHHHcCCCEEEEeCCcEECcCCCC
Confidence 56666443332 7999999999999999876 68999999999999997643
Q ss_pred CCCCCCCCCc-hHHHHHHHhcCceeEEeecCCc-ccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHH
Q psy7538 262 LPGWTDNING-PTGLLIGAGKGVIRSMYCKNTG-MADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQ 339 (543)
Q Consensus 262 ~~gw~d~~~g-~~~~~~~~~~g~~~~~~~~~~~-~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~ 339 (543)
.. +..+ ...++..+..|....++++++. .++++|++|+|++++.++.... +++||++++ +++|+.
T Consensus 178 ~~----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~~-------~~~~~i~~~--~~~s~~ 244 (310)
T 1eq2_A 178 KG----SMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV-------SGIFNLGTG--RAESFQ 244 (310)
T ss_dssp GG----GGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC-------CEEEEESCS--CCBCHH
T ss_pred CC----ccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhcCC-------CCeEEEeCC--CccCHH
Confidence 11 1111 1235566667766566788888 9999999999999999886532 569999998 889999
Q ss_pred HHHHHHhhhhcCc
Q psy7538 340 EICDIGKDIVTSK 352 (543)
Q Consensus 340 e~~~~i~~~~G~~ 352 (543)
|+++.+.+.+|.+
T Consensus 245 e~~~~i~~~~g~~ 257 (310)
T 1eq2_A 245 AVADATLAYHKKG 257 (310)
T ss_dssp HHHHHC-------
T ss_pred HHHHHHHHHcCCC
Confidence 9999999998654
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-30 Score=270.52 Aligned_cols=260 Identities=15% Similarity=0.094 Sum_probs=193.8
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|||||||||||++|+++|++.|+ +|++++|...... .++++.+.+ .+. .....++.++.+|++++
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~-~~~~~~l~~-----~~~----~~~~~~~~~~~~Dl~d~ 91 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGY---EVHGIVRRSSSFN-TGRIEHLYK-----NPQ----AHIEGNMKLHYGDLTDS 91 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCCSSCC-CTTTGGGC------------------CEEEEECCTTCH
T ss_pred cEEEEECCCchHHHHHHHHHHHCCC---EEEEEECCccccc-hhhHHHHhh-----hhc----cccCCCceEEEccCCCH
Confidence 6899999999999999999999986 8999999864311 111111100 000 00124688999999986
Q ss_pred CCCCCHHHHHHHhcC--ccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhccCC---ceEEEEecCccccCC-
Q psy7538 111 KLGISEIDKKELIDN--VDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMKNL---KCFTYISTAYCHPSE- 181 (543)
Q Consensus 111 ~lgls~~~~~~l~~~--vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l---~~~V~vST~y~~~~~- 181 (543)
+ ++..++++ +|+|||+||..... +.....+++|+.|+.+++++|++. ++ ++|||+||.++++..
T Consensus 92 ~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~~~~iv~~SS~~~~~~~~ 164 (375)
T 1t2a_A 92 T------CLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTC-GLINSVKFYQASTSELYGKVQ 164 (375)
T ss_dssp H------HHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-TCTTTCEEEEEEEGGGTCSCS
T ss_pred H------HHHHHHHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHh-CCCccceEEEecchhhhCCCC
Confidence 5 78888775 69999999987643 455678999999999999999987 66 799999999776543
Q ss_pred -CcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCC
Q psy7538 182 -KVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYK 259 (543)
Q Consensus 182 -~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~ 259 (543)
.+++|+..+.|. +.|+.||+.+|.+++.+.. .+++++++||+.+||+..
T Consensus 165 ~~~~~E~~~~~~~-----------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~ 215 (375)
T 1t2a_A 165 EIPQKETTPFYPR-----------------------------SPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRR 215 (375)
T ss_dssp SSSBCTTSCCCCC-----------------------------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTS
T ss_pred CCCCCccCCCCCC-----------------------------ChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCC
Confidence 356665433332 7999999999999998876 689999999999999865
Q ss_pred CCCCCCCCCCCchHHHHHHHhcCce-eEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccH
Q psy7538 260 EPLPGWTDNINGPTGLLIGAGKGVI-RSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITW 338 (543)
Q Consensus 260 ~p~~gw~d~~~g~~~~~~~~~~g~~-~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~ 338 (543)
.+ ++... ....++..+..|.. ....+++++.+++||++|+|++++.++.... +++||++++ +++|+
T Consensus 216 ~~--~~~~~--~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~-------~~~~ni~~~--~~~s~ 282 (375)
T 1t2a_A 216 GA--NFVTR--KISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDE-------PEDFVIATG--EVHSV 282 (375)
T ss_dssp CT--TSHHH--HHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSSS-------CCCEEECCS--CCEEH
T ss_pred CC--CcchH--HHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHHHHHHhcCC-------CceEEEeCC--CcccH
Confidence 32 11100 01223444555643 3457888999999999999999999886532 368999998 88999
Q ss_pred HHHHHHHhhhhcCc
Q psy7538 339 QEICDIGKDIVTSK 352 (543)
Q Consensus 339 ~e~~~~i~~~~G~~ 352 (543)
.|+++.+.+.+|.+
T Consensus 283 ~e~~~~i~~~~g~~ 296 (375)
T 1t2a_A 283 REFVEKSFLHIGKT 296 (375)
T ss_dssp HHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhCCC
Confidence 99999999999654
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.97 E-value=4.7e-31 Score=267.11 Aligned_cols=239 Identities=15% Similarity=0.113 Sum_probs=162.2
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+|+|||||||||||++|+++|++.|+ +|++++|+... ++ ++.+|+++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~----------------------------~~--~~~~Dl~d 48 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNW---HAVGCGFRRAR----------------------------PK--FEQVNLLD 48 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTC---EEEEEC---------------------------------------------
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCC---eEEEEccCCCC----------------------------CC--eEEecCCC
Confidence 68999999999999999999999986 88999986421 12 67799998
Q ss_pred CCCCCCHHHHHHHhcC--ccEEEEcCccCCC---cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccC-CCc
Q psy7538 110 LKLGISEIDKKELIDN--VDIVYHVAATIRF---DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPS-EKV 183 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~--vd~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~-~~~ 183 (543)
++ ++..++++ +|+|||+||.... .+.....+++|+.|+.+++++|++. +. +|||+||.++++. ..+
T Consensus 49 ~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~v~~~~~~~ 120 (315)
T 2ydy_A 49 SN------AVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAV-GA-FLIYISSDYVFDGTNPP 120 (315)
T ss_dssp ---------CHHHHHHHCCSEEEECC-------------------CHHHHHHHHHHHHH-TC-EEEEEEEGGGSCSSSCS
T ss_pred HH------HHHHHHHhhCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEchHHHcCCCCCC
Confidence 76 57777764 9999999997654 2456678999999999999999997 55 9999999977654 235
Q ss_pred ccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCC
Q psy7538 184 LEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLP 263 (543)
Q Consensus 184 i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~ 263 (543)
++|+..+.|. +.|+.+|+.+|++++.+ +++++++||+.|||+...+..
T Consensus 121 ~~E~~~~~~~-----------------------------~~Y~~sK~~~e~~~~~~---~~~~~~lR~~~v~G~~~~~~~ 168 (315)
T 2ydy_A 121 YREEDIPAPL-----------------------------NLYGKTKLDGEKAVLEN---NLGAAVLRIPILYGEVEKLEE 168 (315)
T ss_dssp BCTTSCCCCC-----------------------------SHHHHHHHHHHHHHHHH---CTTCEEEEECSEECSCSSGGG
T ss_pred CCCCCCCCCc-----------------------------CHHHHHHHHHHHHHHHh---CCCeEEEeeeeeeCCCCcccc
Confidence 6665433332 79999999999999987 678899999999998765322
Q ss_pred CCCCCCCchHHHHHHHh-cCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHH
Q psy7538 264 GWTDNINGPTGLLIGAG-KGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEIC 342 (543)
Q Consensus 264 gw~d~~~g~~~~~~~~~-~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~ 342 (543)
+++. .++..+. .|....+ .++...+++|++|+|++++.++.+... . ...+++||++++ +++|+.|++
T Consensus 169 ~~~~------~~~~~~~~~~~~~~~--~~~~~~~~i~v~Dva~a~~~~~~~~~~-~-~~~~~~~~i~~~--~~~s~~e~~ 236 (315)
T 2ydy_A 169 SAVT------VMFDKVQFSNKSANM--DHWQQRFPTHVKDVATVCRQLAEKRML-D-PSIKGTFHWSGN--EQMTKYEMA 236 (315)
T ss_dssp STTG------GGHHHHHCCSSCEEE--ECSSBBCCEEHHHHHHHHHHHHHHHHT-C-TTCCEEEECCCS--CCBCHHHHH
T ss_pred cHHH------HHHHHHHhcCCCeee--ccCceECcEEHHHHHHHHHHHHHhhcc-c-cCCCCeEEEcCC--CcccHHHHH
Confidence 2221 2334444 5554433 356889999999999999998876410 0 013789999998 899999999
Q ss_pred HHHhhhhcCcc
Q psy7538 343 DIGKDIVTSKI 353 (543)
Q Consensus 343 ~~i~~~~G~~~ 353 (543)
+.+.+.+|.+.
T Consensus 237 ~~i~~~~g~~~ 247 (315)
T 2ydy_A 237 CAIADAFNLPS 247 (315)
T ss_dssp HHHHHHTTCCC
T ss_pred HHHHHHhCCCh
Confidence 99999996543
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-31 Score=271.62 Aligned_cols=259 Identities=16% Similarity=0.212 Sum_probs=176.0
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+|+|||||||||||++|+++|++.|+ +|++++|+.........+..+ + ...+++++.+|+++
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~---~V~~~~r~~~~~~~~~~~~~~--------------~-~~~~~~~~~~Dl~d 70 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGY---AVNTTVRDPDNQKKVSHLLEL--------------Q-ELGDLKIFRADLTD 70 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTC---EEEEEESCTTCTTTTHHHHHH--------------G-GGSCEEEEECCTTT
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCC---EEEEEEcCcchhhhHHHHHhc--------------C-CCCcEEEEecCCCC
Confidence 68999999999999999999999997 788888875432211112111 1 12468899999999
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCccCCCc-c-cHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccc---cC-C--
Q psy7538 110 LKLGISEIDKKELIDNVDIVYHVAATIRFD-E-PIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCH---PS-E-- 181 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~ViH~AA~v~~~-~-~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~---~~-~-- 181 (543)
++ ++..+++++|+|||+||...+. . +.+..+++|+.||.+++++|++.+++++|||+||+.+. .. .
T Consensus 71 ~~------~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~ 144 (338)
T 2rh8_A 71 EL------SFEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTG 144 (338)
T ss_dssp SS------SSHHHHTTCSEEEEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSC
T ss_pred hH------HHHHHHcCCCEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCC
Confidence 87 6888889999999999976543 2 22348899999999999999997448999999997521 11 1
Q ss_pred CcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCC-chHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCC
Q psy7538 182 KVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFP-NSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYK 259 (543)
Q Consensus 182 ~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p-n~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~ 259 (543)
.+++|+.+..+. + ..|. ..+ +.|+.||.++|+++..+.+ ++++++++||+.|||+..
T Consensus 145 ~~~~E~~~~~~~-~-----------------~~~~---~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~ 203 (338)
T 2rh8_A 145 LVVDEKNWTDIE-F-----------------LTSA---KPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSL 203 (338)
T ss_dssp CCCCTTTTTCC----------------------------CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCS
T ss_pred cccChhhccchh-h-----------------cccc---CCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCC
Confidence 256665432110 0 0000 001 2699999999999988765 589999999999999976
Q ss_pred CCCCCCCCCCCchHHHHHHHhcCceeEEeec------CCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCC
Q psy7538 260 EPLPGWTDNINGPTGLLIGAGKGVIRSMYCK------NTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKD 333 (543)
Q Consensus 260 ~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~------~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~ 333 (543)
.+. .......+.....|... ..+. +....+++||+|+|++++.++..... +..||+++
T Consensus 204 ~~~------~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~------~~~~~~~~--- 267 (338)
T 2rh8_A 204 TSD------VPSSIGLAMSLITGNEF-LINGMKGMQMLSGSVSIAHVEDVCRAHIFVAEKESA------SGRYICCA--- 267 (338)
T ss_dssp SSS------CCHHHHHHHHHHHTCHH-HHHHHHHHHHHHSSEEEEEHHHHHHHHHHHHHCTTC------CEEEEECS---
T ss_pred CCC------CCchHHHHHHHHcCCcc-ccccccccccccCcccEEEHHHHHHHHHHHHcCCCc------CCcEEEec---
Confidence 431 11111111122233221 1111 12234899999999999998865433 45788865
Q ss_pred CcccHHHHHHHHhhhh
Q psy7538 334 YKITWQEICDIGKDIV 349 (543)
Q Consensus 334 ~~~t~~e~~~~i~~~~ 349 (543)
..+|+.|+++.+.+..
T Consensus 268 ~~~s~~e~~~~l~~~~ 283 (338)
T 2rh8_A 268 ANTSVPELAKFLSKRY 283 (338)
T ss_dssp EEECHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHhC
Confidence 4589999999999877
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-30 Score=270.13 Aligned_cols=261 Identities=16% Similarity=0.148 Sum_probs=191.6
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+|+|||||||||||++++++|++.|+ +|++++|+..... .++++++.+. + .....++.++.+|+++
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~-~~~~~~~~~~-----~-----~~~~~~~~~~~~Dl~d 66 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGY---EVHGIKRRASSFN-TERVDHIYQD-----P-----HTCNPKFHLHYGDLSD 66 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEECC--------------------------------CCEEECCCCSSC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC---EEEEEECCCcccc-hHHHHHHhhc-----c-----ccCCCceEEEECCCCC
Confidence 57999999999999999999999986 8999999764311 1222221100 0 0012478899999998
Q ss_pred CCCCCCHHHHHHHhcC--ccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhccCC---ceEEEEecCccccCC
Q psy7538 110 LKLGISEIDKKELIDN--VDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMKNL---KCFTYISTAYCHPSE 181 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~--vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l---~~~V~vST~y~~~~~ 181 (543)
++ ++..++++ +|+|||+||..... +.....+++|+.|+.+++++|++. ++ ++|||+||..+++..
T Consensus 67 ~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~iv~~SS~~v~g~~ 139 (372)
T 1db3_A 67 TS------NLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFL-GLEKKTRFYQASTSELYGLV 139 (372)
T ss_dssp HH------HHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHT-TCTTTCEEEEEEEGGGGTTC
T ss_pred HH------HHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-CCCCCcEEEEeCChhhhCCC
Confidence 65 78887775 79999999976532 456678899999999999999997 66 799999999776543
Q ss_pred --CcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecC
Q psy7538 182 --KVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIY 258 (543)
Q Consensus 182 --~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~ 258 (543)
.+++|+....|. +.|+.||+.+|.+++.++. .+++++++||+.+||+.
T Consensus 140 ~~~~~~E~~~~~~~-----------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~ 190 (372)
T 1db3_A 140 QEIPQKETTPFYPR-----------------------------SPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPR 190 (372)
T ss_dssp CSSSBCTTSCCCCC-----------------------------SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTT
T ss_pred CCCCCCccCCCCCC-----------------------------ChHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCC
Confidence 256665433332 7999999999999998876 68999999999999986
Q ss_pred CCCCCCCCCCCCchHHHHHHHhcCce-eEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCccc
Q psy7538 259 KEPLPGWTDNINGPTGLLIGAGKGVI-RSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKIT 337 (543)
Q Consensus 259 ~~p~~gw~d~~~g~~~~~~~~~~g~~-~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t 337 (543)
..+ ++.. .....++..+..|.. ....+++++.+++|||+|+|++++.++.... +++||++++ +++|
T Consensus 191 ~~~--~~~~--~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~-------~~~~ni~~~--~~~s 257 (372)
T 1db3_A 191 RGE--TFVT--RKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQEQ-------PEDFVIATG--VQYS 257 (372)
T ss_dssp SCT--TSHH--HHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSSSS-------CCCEEECCC--CCEE
T ss_pred CCC--cchh--hHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHHHHHHHhcCC-------CceEEEcCC--Ccee
Confidence 532 1100 001224445556653 3456888999999999999999998876432 468999998 8899
Q ss_pred HHHHHHHHhhhhcCcc
Q psy7538 338 WQEICDIGKDIVTSKI 353 (543)
Q Consensus 338 ~~e~~~~i~~~~G~~~ 353 (543)
+.|+++.+.+.+|.+.
T Consensus 258 ~~e~~~~i~~~~g~~~ 273 (372)
T 1db3_A 258 VRQFVEMAAAQLGIKL 273 (372)
T ss_dssp HHHHHHHHHHTTTEEE
T ss_pred HHHHHHHHHHHhCCCc
Confidence 9999999999986543
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=5.6e-31 Score=262.99 Aligned_cols=222 Identities=20% Similarity=0.220 Sum_probs=181.4
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|||||||||||++|+++|++.|+ +|++++|. .+|++++
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~r~-------------------------------------~~D~~d~ 45 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPEEY---DIYPFDKK-------------------------------------LLDITNI 45 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTTTE---EEEEECTT-------------------------------------TSCTTCH
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCC---EEEEeccc-------------------------------------ccCCCCH
Confidence 4899999999999999999999986 89999883 1678776
Q ss_pred CCCCCHHHHHHHhc--CccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC--Cc
Q psy7538 111 KLGISEIDKKELID--NVDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE--KV 183 (543)
Q Consensus 111 ~lgls~~~~~~l~~--~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~--~~ 183 (543)
+ ++..+++ ++|+|||+||..... +.....+++|+.|+.+++++|++. ++ +|||+||.++++.. .+
T Consensus 46 ~------~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~v~~SS~~vy~~~~~~~ 117 (287)
T 3sc6_A 46 S------QVQQVVQEIRPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLV-GA-KLVYISTDYVFQGDRPEG 117 (287)
T ss_dssp H------HHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGGSCCCCSSC
T ss_pred H------HHHHHHHhcCCCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEchhhhcCCCCCCC
Confidence 4 7888887 699999999987643 466789999999999999999998 66 69999999776543 46
Q ss_pred ccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCC
Q psy7538 184 LEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLP 263 (543)
Q Consensus 184 i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~ 263 (543)
++|+..+.|. +.|+.+|..+|++++.+. .+++++||+.|||+....
T Consensus 118 ~~E~~~~~p~-----------------------------~~Y~~sK~~~E~~~~~~~---~~~~ilR~~~v~G~~~~~-- 163 (287)
T 3sc6_A 118 YDEFHNPAPI-----------------------------NIYGASKYAGEQFVKELH---NKYFIVRTSWLYGKYGNN-- 163 (287)
T ss_dssp BCTTSCCCCC-----------------------------SHHHHHHHHHHHHHHHHC---SSEEEEEECSEECSSSCC--
T ss_pred CCCCCCCCCC-----------------------------CHHHHHHHHHHHHHHHhC---CCcEEEeeeeecCCCCCc--
Confidence 7776554443 899999999999999884 488999999999986421
Q ss_pred CCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHHH
Q psy7538 264 GWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEICD 343 (543)
Q Consensus 264 gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~~ 343 (543)
....++..+..+....+.+ ++.++++|++|+|++++.++.... +++||++++ +++|+.|+++
T Consensus 164 -------~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~~-------~~~~~i~~~--~~~s~~e~~~ 225 (287)
T 3sc6_A 164 -------FVKTMIRLGKEREEISVVA--DQIGSPTYVADLNVMINKLIHTSL-------YGTYHVSNT--GSCSWFEFAK 225 (287)
T ss_dssp -------HHHHHHHHHTTCSEEEEEC--SCEECCEEHHHHHHHHHHHHTSCC-------CEEEECCCB--SCEEHHHHHH
T ss_pred -------HHHHHHHHHHcCCCeEeec--CcccCceEHHHHHHHHHHHHhCCC-------CCeEEEcCC--CcccHHHHHH
Confidence 1234555666676665554 488999999999999999886543 569999998 8899999999
Q ss_pred HHhhhhcCc
Q psy7538 344 IGKDIVTSK 352 (543)
Q Consensus 344 ~i~~~~G~~ 352 (543)
.+.+.+|.+
T Consensus 226 ~i~~~~g~~ 234 (287)
T 3sc6_A 226 KIFSYANMK 234 (287)
T ss_dssp HHHHHHTCC
T ss_pred HHHHHcCCC
Confidence 999999654
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.1e-31 Score=269.57 Aligned_cols=259 Identities=16% Similarity=0.222 Sum_probs=176.7
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
++|+|||||||||||++|+++|++.|+ +|++++|+... .+++..+.+. +....+++++.+|++
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~G~---~V~~~~r~~~~---~~~~~~~~~~-----------~~~~~~~~~~~~Dl~ 66 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLERGY---TVRATVRDPTN---VKKVKHLLDL-----------PKAETHLTLWKADLA 66 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCTTC---HHHHHHHHTS-----------TTHHHHEEEEECCTT
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCC---EEEEEECCcch---hHHHHHHHhc-----------ccCCCeEEEEEcCCC
Confidence 578999999999999999999999987 78888997542 1222221110 111136889999999
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCccCCCc--ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCcccc-C---CC
Q psy7538 109 QLKLGISEIDKKELIDNVDIVYHVAATIRFD--EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHP-S---EK 182 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~--~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~-~---~~ 182 (543)
+++ ++..+++++|+|||+||...+. .+....+++|+.||.+++++|++.+++++|||+||+.+.. . ..
T Consensus 67 d~~------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~ 140 (337)
T 2c29_D 67 DEG------SFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLP 140 (337)
T ss_dssp STT------TTHHHHTTCSEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCS
T ss_pred CHH------HHHHHHcCCCEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCc
Confidence 986 6888889999999999976543 2234578999999999999999873489999999985322 1 12
Q ss_pred cccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCCC
Q psy7538 183 VLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKEP 261 (543)
Q Consensus 183 ~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~p 261 (543)
.++|+.+.+ .+. ..... ...+.|+.||.++|+++..+.. ++++++++||+.|||+...+
T Consensus 141 ~~~E~~~~~-~~~--------------~~~~~-----~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~ 200 (337)
T 2c29_D 141 VYDESCWSD-MEF--------------CRAKK-----MTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMS 200 (337)
T ss_dssp EECTTCCCC-HHH--------------HHHHC-----CTTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCS
T ss_pred ccCcccCCc-hhh--------------hcccC-----CccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCC
Confidence 355553211 000 00000 0115799999999999988765 69999999999999997543
Q ss_pred CCCCCCCCCchHHHHHH--HhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHH
Q psy7538 262 LPGWTDNINGPTGLLIG--AGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQ 339 (543)
Q Consensus 262 ~~gw~d~~~g~~~~~~~--~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~ 339 (543)
.+ +..+... ...|... ..+.. ....++|++|+|++++.++..... ...|++++ ..+|+.
T Consensus 201 ------~~--~~~~~~~~~~~~g~~~-~~~~~-~~~~~i~v~Dva~a~~~~~~~~~~------~~~~~~~~---~~~s~~ 261 (337)
T 2c29_D 201 ------SM--PPSLITALSPITGNEA-HYSII-RQGQFVHLDDLCNAHIYLFENPKA------EGRYICSS---HDCIIL 261 (337)
T ss_dssp ------SC--CHHHHHHTHHHHTCGG-GHHHH-TEEEEEEHHHHHHHHHHHHHCTTC------CEEEEECC---EEEEHH
T ss_pred ------CC--CchHHHHHHHHcCCCc-ccccc-CCCCEEEHHHHHHHHHHHhcCccc------CceEEEeC---CCCCHH
Confidence 11 1111111 1223211 11111 123499999999999998866433 44787655 458999
Q ss_pred HHHHHHhhhh
Q psy7538 340 EICDIGKDIV 349 (543)
Q Consensus 340 e~~~~i~~~~ 349 (543)
|+++.+.+.+
T Consensus 262 e~~~~i~~~~ 271 (337)
T 2c29_D 262 DLAKMLREKY 271 (337)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHC
Confidence 9999999877
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-30 Score=265.49 Aligned_cols=246 Identities=18% Similarity=0.215 Sum_probs=183.6
Q ss_pred cchhhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCce
Q psy7538 21 PDRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKI 100 (543)
Q Consensus 21 ~~~i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v 100 (543)
+++....+++|+|||||||||||++|+++|++.|+ +|++++|...... +.+ . ...++
T Consensus 12 ~~~~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~--~~l-----------------~-~~~~~ 68 (333)
T 2q1w_A 12 SGLVPRGSHMKKVFITGICGQIGSHIAELLLERGD---KVVGIDNFATGRR--EHL-----------------K-DHPNL 68 (333)
T ss_dssp ---------CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSSCCG--GGS-----------------C-CCTTE
T ss_pred CceeeecCCCCEEEEeCCccHHHHHHHHHHHHCCC---EEEEEECCCccch--hhH-----------------h-hcCCc
Confidence 35566778899999999999999999999999986 8999999754321 000 1 11478
Q ss_pred EEEEccCCCCCCCCCHHHHHHHhcC--ccEEEEcCccCCCc--ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCc
Q psy7538 101 QVISGDITQLKLGISEIDKKELIDN--VDIVYHVAATIRFD--EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAY 176 (543)
Q Consensus 101 ~~i~gDl~~~~lgls~~~~~~l~~~--vd~ViH~AA~v~~~--~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y 176 (543)
.++.+|+++++ ++..++++ +|+|||+||..... +... +++|+.|+.+++++|++. ++++|||+||..
T Consensus 69 ~~~~~Dl~d~~------~~~~~~~~~~~D~vih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~-~~~~iV~~SS~~ 139 (333)
T 2q1w_A 69 TFVEGSIADHA------LVNQLIGDLQPDAVVHTAASYKDPDDWYND--TLTNCVGGSNVVQAAKKN-NVGRFVYFQTAL 139 (333)
T ss_dssp EEEECCTTCHH------HHHHHHHHHCCSEEEECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHT-TCSEEEEEEEGG
T ss_pred eEEEEeCCCHH------HHHHHHhccCCcEEEECceecCCCccCChH--HHHHHHHHHHHHHHHHHh-CCCEEEEECcHH
Confidence 89999999875 78888887 99999999987542 2222 899999999999999997 789999999997
Q ss_pred ccc----CCC-cccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHH-HhhcCCcEEEEe
Q psy7538 177 CHP----SEK-VLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAE-CMELGMPCMILR 250 (543)
Q Consensus 177 ~~~----~~~-~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~-~~~~~lp~~IlR 250 (543)
+++ ... +++|+. .| ..+.|+.+|+.+|++++. + . +++++|
T Consensus 140 ~~g~~~~~~~~~~~E~~--~p----------------------------~~~~Y~~sK~~~E~~~~~s~---~-~~~ilR 185 (333)
T 2q1w_A 140 CYGVKPIQQPVRLDHPR--NP----------------------------ANSSYAISKSANEDYLEYSG---L-DFVTFR 185 (333)
T ss_dssp GGCSCCCSSSBCTTSCC--CC----------------------------TTCHHHHHHHHHHHHHHHHT---C-CEEEEE
T ss_pred HhCCCcccCCCCcCCCC--CC----------------------------CCCchHHHHHHHHHHHHhhh---C-CeEEEe
Confidence 765 211 344432 11 116899999999999988 6 3 899999
Q ss_pred cCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeec
Q psy7538 251 PSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTS 330 (543)
Q Consensus 251 ps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s 330 (543)
|+.|||+... . .....++..+..|. .+++ ++...++++++|+|++++.++.... +++||+++
T Consensus 186 ~~~v~gp~~~--~------~~~~~~~~~~~~~~--~~~~-~~~~~~~i~v~Dva~ai~~~~~~~~-------g~~~~v~~ 247 (333)
T 2q1w_A 186 LANVVGPRNV--S------GPLPIFFQRLSEGK--KCFV-TKARRDFVFVKDLARATVRAVDGVG-------HGAYHFSS 247 (333)
T ss_dssp ESEEESTTCC--S------SHHHHHHHHHHTTC--CCEE-EECEECEEEHHHHHHHHHHHHTTCC-------CEEEECSC
T ss_pred eceEECcCCc--C------cHHHHHHHHHHcCC--eeeC-CCceEeeEEHHHHHHHHHHHHhcCC-------CCEEEeCC
Confidence 9999998621 0 11223455555665 3455 6788999999999999998876421 67999999
Q ss_pred CCCCcccHHHHHHHHhhhhcCc
Q psy7538 331 NKDYKITWQEICDIGKDIVTSK 352 (543)
Q Consensus 331 ~~~~~~t~~e~~~~i~~~~G~~ 352 (543)
+ .++|+.|+++.+.+.+|.+
T Consensus 248 ~--~~~s~~e~~~~i~~~~g~~ 267 (333)
T 2q1w_A 248 G--TDVAIKELYDAVVEAMALP 267 (333)
T ss_dssp S--CCEEHHHHHHHHHHHTTCS
T ss_pred C--CCccHHHHHHHHHHHhCCC
Confidence 8 8899999999999999665
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.4e-31 Score=262.44 Aligned_cols=274 Identities=12% Similarity=0.059 Sum_probs=196.7
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
.|+|||||| ||||++|+++|+++|+ +|++++|+... .+.+. ..+++++.+|+++
T Consensus 5 ~~~ilVtGa-G~iG~~l~~~L~~~g~---~V~~~~r~~~~---~~~~~-------------------~~~~~~~~~D~~d 58 (286)
T 3ius_A 5 TGTLLSFGH-GYTARVLSRALAPQGW---RIIGTSRNPDQ---MEAIR-------------------ASGAEPLLWPGEE 58 (286)
T ss_dssp CCEEEEETC-CHHHHHHHHHHGGGTC---EEEEEESCGGG---HHHHH-------------------HTTEEEEESSSSC
T ss_pred cCcEEEECC-cHHHHHHHHHHHHCCC---EEEEEEcChhh---hhhHh-------------------hCCCeEEEecccc
Confidence 379999998 9999999999999987 89999997532 11111 1468999999998
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhc-cCCceEEEEecCccccCC--Ccccc
Q psy7538 110 LKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQM-KNLKCFTYISTAYCHPSE--KVLEE 186 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~vST~y~~~~~--~~i~E 186 (543)
. + ++++|+|||+|+......+ .+.+++++|++. .++++|||+||+++++.. .+++|
T Consensus 59 ~-------~----~~~~d~vi~~a~~~~~~~~----------~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E 117 (286)
T 3ius_A 59 P-------S----LDGVTHLLISTAPDSGGDP----------VLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDE 117 (286)
T ss_dssp C-------C----CTTCCEEEECCCCBTTBCH----------HHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECT
T ss_pred c-------c----cCCCCEEEECCCccccccH----------HHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCC
Confidence 3 1 6789999999998765432 257899999984 378999999999776654 35677
Q ss_pred cccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCCCCC
Q psy7538 187 RTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPGWT 266 (543)
Q Consensus 187 ~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~gw~ 266 (543)
+..+.|. +.|+.+|+.+|+++..+ . +++++|+||+.|||+...++.
T Consensus 118 ~~~~~p~-----------------------------~~Y~~sK~~~E~~~~~~-~-~~~~~ilRp~~v~G~~~~~~~--- 163 (286)
T 3ius_A 118 TTPLTPT-----------------------------AARGRWRVMAEQQWQAV-P-NLPLHVFRLAGIYGPGRGPFS--- 163 (286)
T ss_dssp TSCCCCC-----------------------------SHHHHHHHHHHHHHHHS-T-TCCEEEEEECEEEBTTBSSST---
T ss_pred CCCCCCC-----------------------------CHHHHHHHHHHHHHHhh-c-CCCEEEEeccceECCCchHHH---
Confidence 6544443 79999999999999988 4 899999999999999764421
Q ss_pred CCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHHHHHh
Q psy7538 267 DNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEICDIGK 346 (543)
Q Consensus 267 d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~~~i~ 346 (543)
.+..|....+.++ ++.+++||++|+|++++.++.+... +++||++++ +++|+.|+++.+.
T Consensus 164 -----------~~~~~~~~~~~~~-~~~~~~i~v~Dva~a~~~~~~~~~~------g~~~~i~~~--~~~s~~e~~~~i~ 223 (286)
T 3ius_A 164 -----------KLGKGGIRRIIKP-GQVFSRIHVEDIAQVLAASMARPDP------GAVYNVCDD--EPVPPQDVIAYAA 223 (286)
T ss_dssp -----------TSSSSCCCEEECT-TCCBCEEEHHHHHHHHHHHHHSCCT------TCEEEECCS--CCBCHHHHHHHHH
T ss_pred -----------HHhcCCccccCCC-CcccceEEHHHHHHHHHHHHhCCCC------CCEEEEeCC--CCccHHHHHHHHH
Confidence 2334554444444 6889999999999999999987654 779999998 8899999999999
Q ss_pred hhhcCccCCCCccccCccccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHhh
Q psy7538 347 DIVTSKIPFNSTLWYPGGTMTQSRLTHFICCLLFHWIPAYFLDAVILISGNKPCLVRIQERIHRGF 412 (543)
Q Consensus 347 ~~~G~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~d~~~~~~G~kP~~~~~~~~l~~~~ 412 (543)
+.+|.+.+.......+.. ...... +...-.....+.+.+.+||+|+...+.+.+.+.+
T Consensus 224 ~~~g~~~~~~~~~~~~~~----~~~~~~----~~~~~~~~d~~k~~~~lG~~p~~p~~~e~l~~~~ 281 (286)
T 3ius_A 224 ELQGLPLPPAVDFDKADL----TPMARS----FYSENKRVRNDRIKEELGVRLKYPNYRVGLEALQ 281 (286)
T ss_dssp HHHTCCCCCEEEGGGSCC----CHHHHH----TTSCCCEECCHHHHHTTCCCCSCSSHHHHHHHHH
T ss_pred HHcCCCCCcccchhhhcc----ChhHHH----hhcCCceeehHHHHHHhCCCCCcCCHHHHHHHHH
Confidence 999665443221111100 000000 0000001123455677999999754555565544
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-30 Score=260.28 Aligned_cols=223 Identities=16% Similarity=0.136 Sum_probs=179.2
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
..|+|||||||||||++|+++|++.|+ +|++++|. .+|++
T Consensus 11 ~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~-------------------------------------~~Dl~ 50 (292)
T 1vl0_A 11 HHMKILITGANGQLGREIQKQLKGKNV---EVIPTDVQ-------------------------------------DLDIT 50 (292)
T ss_dssp -CEEEEEESTTSHHHHHHHHHHTTSSE---EEEEECTT-------------------------------------TCCTT
T ss_pred ccceEEEECCCChHHHHHHHHHHhCCC---eEEeccCc-------------------------------------cCCCC
Confidence 458999999999999999999999986 78888884 16777
Q ss_pred CCCCCCCHHHHHHHhc--CccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC--
Q psy7538 109 QLKLGISEIDKKELID--NVDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE-- 181 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~--~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~-- 181 (543)
+++ ++..+++ ++|+|||+||....+ +.....+++|+.|+.+++++|++. ++ +|||+||.++++..
T Consensus 51 d~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~-~iv~~SS~~v~~~~~~ 122 (292)
T 1vl0_A 51 NVL------AVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSV-GA-EIVQISTDYVFDGEAK 122 (292)
T ss_dssp CHH------HHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGGSCSCCS
T ss_pred CHH------HHHHHHHhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEechHHeECCCCC
Confidence 754 7888887 799999999987542 456778999999999999999997 66 99999999776543
Q ss_pred CcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCC
Q psy7538 182 KVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEP 261 (543)
Q Consensus 182 ~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p 261 (543)
.+++|+..+.|. +.|+.+|+.+|++++.+ +.+++++||+.|||+ ..
T Consensus 123 ~~~~E~~~~~~~-----------------------------~~Y~~sK~~~E~~~~~~---~~~~~~lR~~~v~G~-~~- 168 (292)
T 1vl0_A 123 EPITEFDEVNPQ-----------------------------SAYGKTKLEGENFVKAL---NPKYYIVRTAWLYGD-GN- 168 (292)
T ss_dssp SCBCTTSCCCCC-----------------------------SHHHHHHHHHHHHHHHH---CSSEEEEEECSEESS-SS-
T ss_pred CCCCCCCCCCCc-----------------------------cHHHHHHHHHHHHHHhh---CCCeEEEeeeeeeCC-Cc-
Confidence 356666443332 79999999999999988 458999999999998 31
Q ss_pred CCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHH
Q psy7538 262 LPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEI 341 (543)
Q Consensus 262 ~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~ 341 (543)
+ ....++..+..|....+.+ +...++++++|+|++++.++... . +++||++++ +++|+.|+
T Consensus 169 ------~--~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~-~------~~~~~i~~~--~~~s~~e~ 229 (292)
T 1vl0_A 169 ------N--FVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEK-N------YGTFHCTCK--GICSWYDF 229 (292)
T ss_dssp ------C--HHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHT-C------CEEEECCCB--SCEEHHHH
T ss_pred ------C--hHHHHHHHHhcCCcEEeec--CeeeCCccHHHHHHHHHHHHhcC-C------CcEEEecCC--CCccHHHH
Confidence 1 1123445555565554444 57899999999999999998765 4 679999998 88999999
Q ss_pred HHHHhhhhcCc
Q psy7538 342 CDIGKDIVTSK 352 (543)
Q Consensus 342 ~~~i~~~~G~~ 352 (543)
++.+.+.+|.+
T Consensus 230 ~~~i~~~~g~~ 240 (292)
T 1vl0_A 230 AVEIFRLTGID 240 (292)
T ss_dssp HHHHHHHHCCC
T ss_pred HHHHHHHhCCC
Confidence 99999999654
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.97 E-value=9.2e-31 Score=267.54 Aligned_cols=279 Identities=14% Similarity=0.113 Sum_probs=198.0
Q ss_pred hhhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEE
Q psy7538 23 RIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQV 102 (543)
Q Consensus 23 ~i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~ 102 (543)
++..++++|+|||||||||||++|+++|++.|+ +|++++|+... .+++.+. +... ...++.+
T Consensus 4 ~~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~---~~~~~~~--------~~~~----~~~~~~~ 65 (342)
T 1y1p_A 4 DNAVLPEGSLVLVTGANGFVASHVVEQLLEHGY---KVRGTARSASK---LANLQKR--------WDAK----YPGRFET 65 (342)
T ss_dssp TTCSSCTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSHHH---HHHHHHH--------HHHH----STTTEEE
T ss_pred CcccCCCCCEEEEECCccHHHHHHHHHHHHCCC---EEEEEeCCccc---HHHHHHH--------hhcc----CCCceEE
Confidence 345678899999999999999999999999987 89999996421 1222211 1111 1146888
Q ss_pred E-EccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC
Q psy7538 103 I-SGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE 181 (543)
Q Consensus 103 i-~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~ 181 (543)
+ .+|+++++ ++..+++++|+|||+||.....+.....+++|+.|+.+++++|++..++++|||+||.++++..
T Consensus 66 ~~~~D~~d~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~ 139 (342)
T 1y1p_A 66 AVVEDMLKQG------AYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIP 139 (342)
T ss_dssp EECSCTTSTT------TTTTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCC
T ss_pred EEecCCcChH------HHHHHHcCCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCC
Confidence 8 89999886 6777888999999999988766677889999999999999999864478999999999775321
Q ss_pred ------CcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-c--CCcEEEEecC
Q psy7538 182 ------KVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-L--GMPCMILRPS 252 (543)
Q Consensus 182 ------~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~--~lp~~IlRps 252 (543)
.+++|+.+.. ....... +........|. +.|+.||+.+|++++.+.. . +++++++||+
T Consensus 140 ~~~~~~~~~~E~~~~~----~~~~~~~---~~~~~~~~~~~------~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~ 206 (342)
T 1y1p_A 140 KPNVEGIYLDEKSWNL----ESIDKAK---TLPESDPQKSL------WVYAASKTEAELAAWKFMDENKPHFTLNAVLPN 206 (342)
T ss_dssp CTTCCCCEECTTCCCH----HHHHHHH---HSCTTSTTHHH------HHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEES
T ss_pred CCCCCCcccCccccCc----hhhhhhc---cccccccccch------HHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCC
Confidence 3456654311 0000000 00000001111 7899999999999988765 2 7899999999
Q ss_pred eeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCC
Q psy7538 253 IVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNK 332 (543)
Q Consensus 253 ~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~ 332 (543)
.|||+...+... . .....++..+..|....+.+++ ..++++|++|+|++++.++..... .+..+ ++++
T Consensus 207 ~v~g~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~Dva~a~~~~~~~~~~-----~g~~~-~~~g- 274 (342)
T 1y1p_A 207 YTIGTIFDPETQ---S-GSTSGWMMSLFNGEVSPALALM-PPQYYVSAVDIGLLHLGCLVLPQI-----ERRRV-YGTA- 274 (342)
T ss_dssp EEECCCSCTTTC---C-CHHHHHHHHHHTTCCCHHHHTC-CSEEEEEHHHHHHHHHHHHHCTTC-----CSCEE-EECC-
T ss_pred ceECCCCCCCCC---C-ccHHHHHHHHHcCCCccccccC-CcCCEeEHHHHHHHHHHHHcCccc-----CCceE-EEeC-
Confidence 999997654211 0 1233456666677654445554 678999999999999998876433 24444 4555
Q ss_pred CCcccHHHHHHHHhhhhcC
Q psy7538 333 DYKITWQEICDIGKDIVTS 351 (543)
Q Consensus 333 ~~~~t~~e~~~~i~~~~G~ 351 (543)
.++|+.|+++.+.+.+|.
T Consensus 275 -~~~s~~e~~~~i~~~~~~ 292 (342)
T 1y1p_A 275 -GTFDWNTVLATFRKLYPS 292 (342)
T ss_dssp -EEECHHHHHHHHHHHCTT
T ss_pred -CCCCHHHHHHHHHHHCCC
Confidence 679999999999999954
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-30 Score=289.56 Aligned_cols=271 Identities=15% Similarity=0.119 Sum_probs=200.0
Q ss_pred hhhhcCCCEEEEEcCcchhHHHHHHHHHhh-CCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEE
Q psy7538 24 IAKTYENKSIFLSGGSGFLGKVLIEKILRL-EPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQV 102 (543)
Q Consensus 24 i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~-g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~ 102 (543)
....+++|+|||||||||||++|+++|++. |+ +|++++|+..... + .....++.+
T Consensus 309 ~~~~~~~~~VLVTGatG~IG~~l~~~Ll~~~g~---~V~~~~r~~~~~~---~------------------~~~~~~v~~ 364 (660)
T 1z7e_A 309 ACTARRRTRVLILGVNGFIGNHLTERLLREDHY---EVYGLDIGSDAIS---R------------------FLNHPHFHF 364 (660)
T ss_dssp -----CCEEEEEETTTSHHHHHHHHHHHHSSSE---EEEEEESCCTTTG---G------------------GTTCTTEEE
T ss_pred chhhccCceEEEEcCCcHHHHHHHHHHHhcCCC---EEEEEEcCchhhh---h------------------hccCCceEE
Confidence 344567899999999999999999999998 65 8999999764321 0 011247899
Q ss_pred EEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCC---cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCcccc
Q psy7538 103 ISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRF---DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHP 179 (543)
Q Consensus 103 i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~ 179 (543)
+.+|+++++ +.++.+++++|+|||+||.... ..+....+++|+.|+.+++++|++. + ++|||+||.++++
T Consensus 365 v~~Dl~d~~-----~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-~-~r~V~~SS~~vyg 437 (660)
T 1z7e_A 365 VEGDISIHS-----EWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFPSTSEVYG 437 (660)
T ss_dssp EECCTTTCH-----HHHHHHHHHCSEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEECCGGGGB
T ss_pred EECCCCCcH-----HHHHHhhcCCCEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHh-C-CEEEEEecHHHcC
Confidence 999999864 2367788899999999998763 2456678999999999999999997 5 8999999997765
Q ss_pred CC--CcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeee
Q psy7538 180 SE--KVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVP 256 (543)
Q Consensus 180 ~~--~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G 256 (543)
.. .+++|+....+..| .....+.|+.||+.+|++++.+.. .+++++++||+.|||
T Consensus 438 ~~~~~~~~E~~~~~~~~p----------------------~~~p~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~G 495 (660)
T 1z7e_A 438 MCSDKYFDEDHSNLIVGP----------------------VNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMG 495 (660)
T ss_dssp TCCSSSBCTTTCCEEECC----------------------TTCTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEES
T ss_pred CCCCcccCCCccccccCc----------------------ccCCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccC
Confidence 43 34566532100000 001116899999999999988765 689999999999999
Q ss_pred cCCCCCCCCCCCC-CchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCC-
Q psy7538 257 IYKEPLPGWTDNI-NGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDY- 334 (543)
Q Consensus 257 ~~~~p~~gw~d~~-~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~- 334 (543)
+...+..++.-+. .....++..+..|....+++++++.++++|++|+|++++.++..... . ..+++||++++ +
T Consensus 496 p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~-~--~~g~~~ni~~~--~~ 570 (660)
T 1z7e_A 496 PRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGN-R--CDGEIINIGNP--EN 570 (660)
T ss_dssp TTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHHHHHHHCGGG-T--TTTEEEEECCG--GG
T ss_pred CCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHHHHHHhCccc-c--CCCeEEEECCC--CC
Confidence 9764321100000 11234566677777766788889999999999999999999876541 0 13789999987 6
Q ss_pred cccHHHHHHHHhhhhcCc
Q psy7538 335 KITWQEICDIGKDIVTSK 352 (543)
Q Consensus 335 ~~t~~e~~~~i~~~~G~~ 352 (543)
++|+.|+++.+.+.+|..
T Consensus 571 ~~s~~el~~~i~~~~g~~ 588 (660)
T 1z7e_A 571 EASIEELGEMLLASFEKH 588 (660)
T ss_dssp EEEHHHHHHHHHHHHHHC
T ss_pred CcCHHHHHHHHHHHhcCC
Confidence 899999999999998653
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-30 Score=261.44 Aligned_cols=245 Identities=20% Similarity=0.214 Sum_probs=186.9
Q ss_pred EEEEEcCcchhHHHHHHHHHhh--CCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 32 SIFLSGGSGFLGKVLIEKILRL--EPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 32 ~VlITGatGFiG~~Lv~~Ll~~--g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+|||||||||||++|+++|++. |+ +|+++.|..... .++.++.+|+++
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~---~V~~~~r~~~~~---------------------------~~~~~~~~D~~d 50 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKK---NVIASDIVQRDT---------------------------GGIKFITLDVSN 50 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGG---GEEEEESSCCCC---------------------------TTCCEEECCTTC
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCC---EEEEecCCCccc---------------------------cCceEEEecCCC
Confidence 5899999999999999999998 65 788888875321 145688999998
Q ss_pred CCCCCCHHHHHHHhc--CccEEEEcCccCCC--cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC---C
Q psy7538 110 LKLGISEIDKKELID--NVDIVYHVAATIRF--DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE---K 182 (543)
Q Consensus 110 ~~lgls~~~~~~l~~--~vd~ViH~AA~v~~--~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~---~ 182 (543)
++ ++..+++ ++|+|||+||.... .+.....+++|+.|+.+++++|++. ++++|||+||..+++.. .
T Consensus 51 ~~------~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~~~ 123 (317)
T 3ajr_A 51 RD------EIDRAVEKYSIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQH-RVEKVVIPSTIGVFGPETPKN 123 (317)
T ss_dssp HH------HHHHHHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGCCTTSCSS
T ss_pred HH------HHHHHHhhcCCcEEEECCcccCCccccChHHHhhhhhHHHHHHHHHHHHc-CCCEEEEecCHHHhCCCCCCC
Confidence 75 7888887 89999999997542 2445678999999999999999997 78999999999777643 2
Q ss_pred cccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCCC
Q psy7538 183 VLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKEP 261 (543)
Q Consensus 183 ~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~p 261 (543)
+.+|+..+.|. +.|+.||+.+|+++..+.. .+++++++||+.+||+...|
T Consensus 124 ~~~e~~~~~p~-----------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~~ 174 (317)
T 3ajr_A 124 KVPSITITRPR-----------------------------TMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEP 174 (317)
T ss_dssp SBCSSSCCCCC-----------------------------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSSSCC
T ss_pred CccccccCCCC-----------------------------chHHHHHHHHHHHHHHHHHhcCCeEEEEecCcEeccCCCC
Confidence 34454322222 8999999999999988765 68999999999999987655
Q ss_pred CCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHH
Q psy7538 262 LPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEI 341 (543)
Q Consensus 262 ~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~ 341 (543)
..++.+ .....+.....+.....+++++..+++||++|+|++++.++..... . ...+++||+++ .++|+.|+
T Consensus 175 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~-~-~~~g~~~~i~~---~~~s~~e~ 246 (317)
T 3ajr_A 175 TAGTTD---YAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRD-K-LVLRNGYNVTA---YTFTPSEL 246 (317)
T ss_dssp CSCSST---HHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCCGG-G-CSSCSCEECCS---EEECHHHH
T ss_pred CCcchh---HHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhCCcc-c-cccCceEecCC---ccccHHHH
Confidence 322211 1122333333333344567788899999999999999998876542 0 01247999985 46999999
Q ss_pred HHHHhhhhc
Q psy7538 342 CDIGKDIVT 350 (543)
Q Consensus 342 ~~~i~~~~G 350 (543)
++.+.+.+|
T Consensus 247 ~~~i~~~~~ 255 (317)
T 3ajr_A 247 YSKIKERIP 255 (317)
T ss_dssp HHHHHTTCC
T ss_pred HHHHHHHCC
Confidence 999999884
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=262.32 Aligned_cols=230 Identities=20% Similarity=0.179 Sum_probs=181.7
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|||||||||||++|+++|+ .|+ +|++++|+.. .+.+|++++
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~---~V~~~~r~~~---------------------------------~~~~D~~d~ 43 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVG---NLIALDVHSK---------------------------------EFCGDFSNP 43 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTS---EEEEECTTCS---------------------------------SSCCCTTCH
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCC---eEEEeccccc---------------------------------cccccCCCH
Confidence 589999999999999999999 776 8999998641 246898876
Q ss_pred CCCCCHHHHHHHhcC--ccEEEEcCccCCC---cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC--Cc
Q psy7538 111 KLGISEIDKKELIDN--VDIVYHVAATIRF---DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE--KV 183 (543)
Q Consensus 111 ~lgls~~~~~~l~~~--vd~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~--~~ 183 (543)
+ ++..++++ +|+|||+||.... .+.....+++|+.|+.+++++|++. ++ +|||+||.++++.. .+
T Consensus 44 ~------~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~vy~~~~~~~ 115 (299)
T 1n2s_A 44 K------GVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANET-GA-WVVHYSTDYVFPGTGDIP 115 (299)
T ss_dssp H------HHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTT-TC-EEEEEEEGGGSCCCTTCC
T ss_pred H------HHHHHHHhcCCCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEecccEEeCCCCCC
Confidence 4 78888876 9999999998753 3456778999999999999999987 56 79999999776653 35
Q ss_pred ccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCC
Q psy7538 184 LEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLP 263 (543)
Q Consensus 184 i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~ 263 (543)
++|+..+.|. +.|+.+|..+|++++.+. .+++++||+.|||+...
T Consensus 116 ~~E~~~~~p~-----------------------------~~Y~~sK~~~E~~~~~~~---~~~~ilRp~~v~G~~~~--- 160 (299)
T 1n2s_A 116 WQETDATSPL-----------------------------NVYGKTKLAGEKALQDNC---PKHLIFRTSWVYAGKGN--- 160 (299)
T ss_dssp BCTTSCCCCS-----------------------------SHHHHHHHHHHHHHHHHC---SSEEEEEECSEECSSSC---
T ss_pred CCCCCCCCCc-----------------------------cHHHHHHHHHHHHHHHhC---CCeEEEeeeeecCCCcC---
Confidence 6665433332 799999999999999884 49999999999998642
Q ss_pred CCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHHH
Q psy7538 264 GWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEICD 343 (543)
Q Consensus 264 gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~~ 343 (543)
+ -...++..+..|....+.+ ++..+++|++|+|++++.++.+... . ...+++||++++ +++|+.|+++
T Consensus 161 ----~--~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~~~-~-~~~~~~~~i~~~--~~~s~~e~~~ 228 (299)
T 1n2s_A 161 ----N--FAKTMLRLAKERQTLSVIN--DQYGAPTGAELLADCTAHAIRVALN-K-PEVAGLYHLVAG--GTTTWHDYAA 228 (299)
T ss_dssp ----C--HHHHHHHHHHHCSEEEEEC--SCEECCEEHHHHHHHHHHHHHHHHH-C-GGGCEEEECCCB--SCEEHHHHHH
T ss_pred ----c--HHHHHHHHHhcCCCEEeec--CcccCCeeHHHHHHHHHHHHHHhcc-c-cccCceEEEeCC--CCCCHHHHHH
Confidence 1 1223555566666554454 4889999999999999999887631 0 002679999998 8999999999
Q ss_pred HHhhhhcCc
Q psy7538 344 IGKDIVTSK 352 (543)
Q Consensus 344 ~i~~~~G~~ 352 (543)
.+.+.+|.+
T Consensus 229 ~i~~~~g~~ 237 (299)
T 1n2s_A 229 LVFDEARKA 237 (299)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHhCCC
Confidence 999998654
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.5e-30 Score=265.93 Aligned_cols=257 Identities=18% Similarity=0.137 Sum_probs=192.0
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCC-ceEEEEccCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQ-KIQVISGDITQ 109 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~-~v~~i~gDl~~ 109 (543)
|+|||||||||||++|+++|++.|+ +|++++|+...... ++++.+. ..+ ..... ++.++.+|+++
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~---~V~~~~r~~~~~~~-~~~~~~~-----~~~-----~~~~~~~~~~~~~Dl~d 94 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGY---EVHGLIRRSSNFNT-QRINHIY-----IDP-----HNVNKALMKLHYADLTD 94 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCCSSCCC-TTTTTTC------------------CCEEEEECCTTC
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCC---EEEEEecCCccccc-hhhhhhh-----hcc-----ccccccceEEEECCCCC
Confidence 6899999999999999999999986 89999998643110 1111100 000 00012 78899999998
Q ss_pred CCCCCCHHHHHHHhcC--ccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhccCCc-----eEEEEecCcccc
Q psy7538 110 LKLGISEIDKKELIDN--VDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMKNLK-----CFTYISTAYCHP 179 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~--vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~-----~~V~vST~y~~~ 179 (543)
++ ++..++++ +|+|||+||..... +.....+++|+.|+.+++++|++. +++ +|||+||.++++
T Consensus 95 ~~------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~~~~~~~~~v~~SS~~vyg 167 (381)
T 1n7h_A 95 AS------SLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH-TIDSGRTVKYYQAGSSEMFG 167 (381)
T ss_dssp HH------HHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHH-HHHHCCCCEEEEEEEGGGGT
T ss_pred HH------HHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-CCccCCccEEEEeCcHHHhC
Confidence 65 78888775 69999999987643 456678999999999999999987 555 999999997765
Q ss_pred CCC-cccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeec
Q psy7538 180 SEK-VLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPI 257 (543)
Q Consensus 180 ~~~-~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~ 257 (543)
... +++|+....|. +.|+.+|+.+|.++..+.. .+++++++|++++||+
T Consensus 168 ~~~~~~~E~~~~~~~-----------------------------~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp 218 (381)
T 1n7h_A 168 STPPPQSETTPFHPR-----------------------------SPYAASKCAAHWYTVNYREAYGLFACNGILFNHESP 218 (381)
T ss_dssp TSCSSBCTTSCCCCC-----------------------------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECT
T ss_pred CCCCCCCCCCCCCCC-----------------------------CchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCC
Confidence 432 55665433332 7999999999999998876 6899999999999998
Q ss_pred CCCCCCCCCCCCCc--hHHHHHHHhcCce-eEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCC
Q psy7538 258 YKEPLPGWTDNING--PTGLLIGAGKGVI-RSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDY 334 (543)
Q Consensus 258 ~~~p~~gw~d~~~g--~~~~~~~~~~g~~-~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~ 334 (543)
...+ ++.. ...++..+..|.. ....++++..++++|++|+|++++.++.... +++||++++ +
T Consensus 219 ~~~~------~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~-------~~~~~i~~~--~ 283 (381)
T 1n7h_A 219 RRGE------NFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQEK-------PDDYVVATE--E 283 (381)
T ss_dssp TSCT------TSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTSSS-------CCEEEECCS--C
T ss_pred CCCC------cchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHHHHHHHhCCC-------CCeEEeeCC--C
Confidence 6432 2111 1123444555643 3356888899999999999999999886532 469999998 8
Q ss_pred cccHHHHHHHHhhhhcCc
Q psy7538 335 KITWQEICDIGKDIVTSK 352 (543)
Q Consensus 335 ~~t~~e~~~~i~~~~G~~ 352 (543)
++|+.|+++.+.+.+|.+
T Consensus 284 ~~s~~e~~~~i~~~~g~~ 301 (381)
T 1n7h_A 284 GHTVEEFLDVSFGYLGLN 301 (381)
T ss_dssp EEEHHHHHHHHHHHTTCC
T ss_pred CCcHHHHHHHHHHHcCCC
Confidence 999999999999999654
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.1e-30 Score=265.32 Aligned_cols=250 Identities=16% Similarity=0.183 Sum_probs=188.1
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCC--CcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEP--NVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~--~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+|+|||||||||||++|+++|+++|. ++.+|++++|...... ....+++++.+|+
T Consensus 1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-----------------------~~~~~~~~~~~Dl 57 (364)
T 2v6g_A 1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-----------------------HEDNPINYVQCDI 57 (364)
T ss_dssp CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-----------------------CCSSCCEEEECCT
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-----------------------cccCceEEEEeec
Confidence 58999999999999999999999981 1128999999865321 0124688999999
Q ss_pred CCCCCCCCHHHHHHHhcC---ccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhc-cCCceEE-------EEecCc
Q psy7538 108 TQLKLGISEIDKKELIDN---VDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQM-KNLKCFT-------YISTAY 176 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~---vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V-------~vST~y 176 (543)
++++ ++..++++ +|+|||+||... .+....+++|+.|+.+++++|++. +++++|| |+||..
T Consensus 58 ~d~~------~~~~~~~~~~~~d~vih~a~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~ 129 (364)
T 2v6g_A 58 SDPD------DSQAKLSPLTDVTHVFYVTWANR--STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFE 129 (364)
T ss_dssp TSHH------HHHHHHTTCTTCCEEEECCCCCC--SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGG
T ss_pred CCHH------HHHHHHhcCCCCCEEEECCCCCc--chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechh
Confidence 9865 78888888 999999999764 456788999999999999999986 3689998 799986
Q ss_pred cccCC----CcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cC-CcEEEEe
Q psy7538 177 CHPSE----KVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LG-MPCMILR 250 (543)
Q Consensus 177 ~~~~~----~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~-lp~~IlR 250 (543)
+++.. .+++|+....| .++.| +.+|+++.++.+ .+ ++++|+|
T Consensus 130 vyg~~~~~~~~~~E~~~~~~----------------------------~~~~y----~~~E~~~~~~~~~~~~~~~~ilR 177 (364)
T 2v6g_A 130 SYGKIESHDPPYTEDLPRLK----------------------------YMNFY----YDLEDIMLEEVEKKEGLTWSVHR 177 (364)
T ss_dssp GTTTSCCCCSSBCTTSCCCS----------------------------SCCHH----HHHHHHHHHHHTTSTTCEEEEEE
T ss_pred hccccccCCCCCCccccCCc----------------------------cchhh----HHHHHHHHHHhhcCCCceEEEEC
Confidence 66542 35556533222 12677 458999988776 56 9999999
Q ss_pred cCeeeecCCCCCCCCCCCCCchHHHHHHH--hcCceeEEeecC---CcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 251 PSIVVPIYKEPLPGWTDNINGPTGLLIGA--GKGVIRSMYCKN---TGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 251 ps~V~G~~~~p~~gw~d~~~g~~~~~~~~--~~g~~~~~~~~~---~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
|+.|||+...+.. +...+..++..+ ..|....+++++ ....++++|+|+|++++.++.+... .+++
T Consensus 178 p~~v~G~~~~~~~----~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~~~-----~g~~ 248 (364)
T 2v6g_A 178 PGNIFGFSPYSMM----NLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAVDPYA-----KNEA 248 (364)
T ss_dssp ESSEECCCTTCSS----CHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHHHHHHHHHHHHCGGG-----TTEE
T ss_pred CCceeCCCCCccc----chHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHHHHHHHHHHHHhCCCC-----CCce
Confidence 9999999764311 101111133333 356655556766 3457888999999999999987643 3779
Q ss_pred EEeecCCCCcccHHHHHHHHhhhhcCcc
Q psy7538 326 CNLTSNKDYKITWQEICDIGKDIVTSKI 353 (543)
Q Consensus 326 yni~s~~~~~~t~~e~~~~i~~~~G~~~ 353 (543)
||++++ +++|+.|+++.+.+.+|.+.
T Consensus 249 ~ni~~~--~~~s~~e~~~~i~~~~g~~~ 274 (364)
T 2v6g_A 249 FNVSNG--DVFKWKHFWKVLAEQFGVEC 274 (364)
T ss_dssp EEECCS--CCBCHHHHHHHHHHHHTCCB
T ss_pred EEecCC--CcCCHHHHHHHHHHHhCCCC
Confidence 999998 88999999999999996553
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.4e-30 Score=256.57 Aligned_cols=229 Identities=11% Similarity=0.016 Sum_probs=170.0
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|||||||||||++|+++|+++|+ +|++++|++... . +..|
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~---~V~~l~R~~~~~----------------------------~---~~~~---- 42 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGH---EVTLVSRKPGPG----------------------------R---ITWD---- 42 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCCTT----------------------------E---EEHH----
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCCCcC----------------------------e---eecc----
Confidence 7899999999999999999999998 889999975321 1 1122
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCC------Ccc-cHHHHHHHHHHHHHHHHHHHHhcc-CCceEEEEecCccccCC-
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIR------FDE-PIKTAVILNTRGTRDMLELSKQMK-NLKCFTYISTAYCHPSE- 181 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~------~~~-~~~~~~~~Nv~gt~~ll~~a~~~~-~l~~~V~vST~y~~~~~- 181 (543)
+.....++++|+|||+|+..- +++ ..+...+.|+.+|.+|+++|++.+ +.+.||++||++++++.
T Consensus 43 ------~~~~~~l~~~d~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~ 116 (298)
T 4b4o_A 43 ------ELAASGLPSCDAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSL 116 (298)
T ss_dssp ------HHHHHCCCSCSEEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCS
T ss_pred ------hhhHhhccCCCEEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCC
Confidence 112345678999999998431 222 234578899999999999999873 34568999999776654
Q ss_pred -CcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCC
Q psy7538 182 -KVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKE 260 (543)
Q Consensus 182 -~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~ 260 (543)
.+++|+..+.|. +.|+.+|...|....... .+++++++||++|||+...
T Consensus 117 ~~~~~E~~p~~~~-----------------------------~~~~~~~~~~e~~~~~~~-~~~~~~~~r~~~v~g~~~~ 166 (298)
T 4b4o_A 117 TAEYDEDSPGGDF-----------------------------DFFSNLVTKWEAAARLPG-DSTRQVVVRSGVVLGRGGG 166 (298)
T ss_dssp SCCBCTTCCCSCS-----------------------------SHHHHHHHHHHHHHCCSS-SSSEEEEEEECEEECTTSH
T ss_pred CCcccccCCcccc-----------------------------chhHHHHHHHHHHHHhhc-cCCceeeeeeeeEEcCCCC
Confidence 356666443332 567777777776543322 4899999999999998531
Q ss_pred CCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHH
Q psy7538 261 PLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQE 340 (543)
Q Consensus 261 p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e 340 (543)
....++.....|... ..+++++.+++|||||+|++++.++.++.. .++||++++ +++|+.|
T Consensus 167 ----------~~~~~~~~~~~~~~~-~~g~g~~~~~~ihv~Dva~a~~~~~~~~~~------~g~yn~~~~--~~~t~~e 227 (298)
T 4b4o_A 167 ----------AMGHMLLPFRLGLGG-PIGSGHQFFPWIHIGDLAGILTHALEANHV------HGVLNGVAP--SSATNAE 227 (298)
T ss_dssp ----------HHHHHHHHHHTTCCC-CBTTSCSBCCEEEHHHHHHHHHHHHHCTTC------CEEEEESCS--CCCBHHH
T ss_pred ----------chhHHHHHHhcCCcc-eecccCceeecCcHHHHHHHHHHHHhCCCC------CCeEEEECC--CccCHHH
Confidence 111233444445443 468999999999999999999999987764 559999999 9999999
Q ss_pred HHHHHhhhhcCc
Q psy7538 341 ICDIGKDIVTSK 352 (543)
Q Consensus 341 ~~~~i~~~~G~~ 352 (543)
+++.+++.+|++
T Consensus 228 ~~~~ia~~lgrp 239 (298)
T 4b4o_A 228 FAQTFGAALGRR 239 (298)
T ss_dssp HHHHHHHHHTCC
T ss_pred HHHHHHHHhCcC
Confidence 999999999543
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.2e-29 Score=255.23 Aligned_cols=240 Identities=16% Similarity=0.164 Sum_probs=187.5
Q ss_pred chhhhhcCCCEEEEEcCcchhHHHHHHHHHhh-CCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCce
Q psy7538 22 DRIAKTYENKSIFLSGGSGFLGKVLIEKILRL-EPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKI 100 (543)
Q Consensus 22 ~~i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~-g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v 100 (543)
+++.+++++|+|||||||||||++++++|++. |+ .+|+++.|.... .+.+.+.+ . ..++
T Consensus 13 ~~~~~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~--~~V~~~~r~~~~---~~~~~~~~-------------~--~~~v 72 (344)
T 2gn4_A 13 PNHQNMLDNQTILITGGTGSFGKCFVRKVLDTTNA--KKIIVYSRDELK---QSEMAMEF-------------N--DPRM 72 (344)
T ss_dssp ---CCTTTTCEEEEETTTSHHHHHHHHHHHHHCCC--SEEEEEESCHHH---HHHHHHHH-------------C--CTTE
T ss_pred ccHHHhhCCCEEEEECCCcHHHHHHHHHHHhhCCC--CEEEEEECChhh---HHHHHHHh-------------c--CCCE
Confidence 66888999999999999999999999999999 75 478999996421 11111110 1 2478
Q ss_pred EEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCC---cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCcc
Q psy7538 101 QVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRF---DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYC 177 (543)
Q Consensus 101 ~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~ 177 (543)
.++.+|+++++ ++..+++++|+|||+||.... .......+++|+.|+.+++++|.+. ++++||++||..+
T Consensus 73 ~~~~~Dl~d~~------~l~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~-~v~~~V~~SS~~~ 145 (344)
T 2gn4_A 73 RFFIGDVRDLE------RLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKN-AISQVIALSTDKA 145 (344)
T ss_dssp EEEECCTTCHH------HHHHHTTTCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEECCGGG
T ss_pred EEEECCCCCHH------HHHHHHhcCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhC-CCCEEEEecCCcc
Confidence 99999999875 788999999999999997653 2345678999999999999999998 8999999999744
Q ss_pred ccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEEEecCe
Q psy7538 178 HPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMILRPSI 253 (543)
Q Consensus 178 ~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~IlRps~ 253 (543)
.. |. +.|+.||+.+|.++..+.. .+++++++||++
T Consensus 146 ~~------------p~-----------------------------~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~ 184 (344)
T 2gn4_A 146 AN------------PI-----------------------------NLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGN 184 (344)
T ss_dssp SS------------CC-----------------------------SHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCE
T ss_pred CC------------Cc-----------------------------cHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEecc
Confidence 21 11 7999999999999998774 479999999999
Q ss_pred eeecCCCCCCCCCCCCCchHHHHHHHhcCc-eeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCC
Q psy7538 254 VVPIYKEPLPGWTDNINGPTGLLIGAGKGV-IRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNK 332 (543)
Q Consensus 254 V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~-~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~ 332 (543)
|+|+.... ...++..+..|. ...+ .+++..+++++++|+|++++.++..... +++||++++
T Consensus 185 v~g~~~~~----------i~~~~~~~~~g~~~~~i-~~~~~~r~~i~v~D~a~~v~~~l~~~~~------g~~~~~~~~- 246 (344)
T 2gn4_A 185 VVGSRGSV----------VPFFKKLVQNKASEIPI-TDIRMTRFWITLDEGVSFVLKSLKRMHG------GEIFVPKIP- 246 (344)
T ss_dssp ETTCTTSH----------HHHHHHHHHHTCCCEEE-SCTTCEEEEECHHHHHHHHHHHHHHCCS------SCEEEECCC-
T ss_pred EECCCCCH----------HHHHHHHHHcCCCceEE-eCCCeEEeeEEHHHHHHHHHHHHhhccC------CCEEecCCC-
Confidence 99975321 123455556666 4443 4778889999999999999999876543 779998764
Q ss_pred CCcccHHHHHHHHhhhh
Q psy7538 333 DYKITWQEICDIGKDIV 349 (543)
Q Consensus 333 ~~~~t~~e~~~~i~~~~ 349 (543)
++++.|+++.+.+..
T Consensus 247 --~~s~~el~~~i~~~~ 261 (344)
T 2gn4_A 247 --SMKMTDLAKALAPNT 261 (344)
T ss_dssp --EEEHHHHHHHHCTTC
T ss_pred --cEEHHHHHHHHHHhC
Confidence 599999999998765
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-29 Score=243.14 Aligned_cols=222 Identities=14% Similarity=0.060 Sum_probs=166.7
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
.|+|+|||||||||++|+++|++.|+ +|++++|+.... .....++.++.+|+++
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~-----------------------~~~~~~~~~~~~Dl~d 57 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGF---EVTAVVRHPEKI-----------------------KIENEHLKVKKADVSS 57 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTC---EEEEECSCGGGC-----------------------CCCCTTEEEECCCTTC
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCC---EEEEEEcCcccc-----------------------hhccCceEEEEecCCC
Confidence 47999999999999999999999986 899999986432 2223689999999998
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC-Ccccccc
Q psy7538 110 LKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE-KVLEERT 188 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~-~~i~E~~ 188 (543)
++ ++..+++++|+|||+|+....+ ...+++|+.++.+++++|++. ++++|||+||..+.... ....|+.
T Consensus 58 ~~------~~~~~~~~~d~vi~~a~~~~~~---~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~~~ 127 (227)
T 3dhn_A 58 LD------EVCEVCKGADAVISAFNPGWNN---PDIYDETIKVYLTIIDGVKKA-GVNRFLMVGGAGSLFIAPGLRLMDS 127 (227)
T ss_dssp HH------HHHHHHTTCSEEEECCCC---------CCSHHHHHHHHHHHHHHHT-TCSEEEEECCSTTSEEETTEEGGGT
T ss_pred HH------HHHHHhcCCCEEEEeCcCCCCC---hhHHHHHHHHHHHHHHHHHHh-CCCEEEEeCChhhccCCCCCccccC
Confidence 75 8999999999999999875321 237888999999999999998 78999999998654322 2222221
Q ss_pred cCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCCCCCCCCC
Q psy7538 189 YLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKEPLPGWTD 267 (543)
Q Consensus 189 y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~p~~gw~d 267 (543)
...|. +.|+.+|+.+|.+++.+.+ .+++++++||+.|||+...+ +
T Consensus 128 ~~~p~-----------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~--~--- 173 (227)
T 3dhn_A 128 GEVPE-----------------------------NILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMRPGVRT--G--- 173 (227)
T ss_dssp TCSCG-----------------------------GGHHHHHHHHHHHHHTGGGCCSSEEEEEECCSEEESCCCC--C---
T ss_pred CcchH-----------------------------HHHHHHHHHHHHHHHHHhhccCccEEEEeCCcccCCCccc--c---
Confidence 11111 7899999999999988875 79999999999999986532 1
Q ss_pred CCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHH
Q psy7538 268 NINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQE 340 (543)
Q Consensus 268 ~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e 340 (543)
.+ ..+....+. .++ ..++|+++|+|++++.++.++.. .+++||++++ ++.+|.+
T Consensus 174 -~~---------~~~~~~~~~-~~~-~~~~i~~~Dva~ai~~~l~~~~~-----~g~~~~~~~~--~~~~~~~ 227 (227)
T 3dhn_A 174 -RY---------RLGKDDMIV-DIV-GNSHISVEDYAAAMIDELEHPKH-----HQERFTIGYL--EHHHHHH 227 (227)
T ss_dssp -CC---------EEESSBCCC-CTT-SCCEEEHHHHHHHHHHHHHSCCC-----CSEEEEEECC--SCCC---
T ss_pred -ce---------eecCCCccc-CCC-CCcEEeHHHHHHHHHHHHhCccc-----cCcEEEEEee--hhcccCC
Confidence 11 011111111 122 28999999999999999988765 5899999999 8888753
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.9e-29 Score=270.52 Aligned_cols=232 Identities=15% Similarity=0.111 Sum_probs=174.7
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+|+|||||||||||++|++.|++.|+ +|++++|+.... ..+.+|+.+
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~---~V~~l~R~~~~~------------------------------~~v~~d~~~ 193 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGH---EVIQLVRKEPKP------------------------------GKRFWDPLN 193 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESSSCCT------------------------------TCEECCTTS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCCCCc------------------------------cceeecccc
Confidence 78999999999999999999999987 899999986431 125678775
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCccCCC----cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCcccc-C--CC
Q psy7538 110 LKLGISEIDKKELIDNVDIVYHVAATIRF----DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHP-S--EK 182 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~ViH~AA~v~~----~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~-~--~~ 182 (543)
. ...+++++|+|||+||.... .+.....+++|+.|+.+++++|.+..++++|||+||+++++ . ..
T Consensus 194 ~--------~~~~l~~~D~Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~ 265 (516)
T 3oh8_A 194 P--------ASDLLDGADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDE 265 (516)
T ss_dssp C--------CTTTTTTCSEEEECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEE
T ss_pred h--------hHHhcCCCCEEEECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCC
Confidence 3 23456799999999997632 24556789999999999999944444899999999997776 2 22
Q ss_pred cccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCC
Q psy7538 183 VLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPL 262 (543)
Q Consensus 183 ~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~ 262 (543)
+++|+... |. +.|+.+|..+|.++......|++++|+||+.|||+..
T Consensus 266 ~~~E~~~~-~~-----------------------------~~y~~~~~~~E~~~~~~~~~gi~~~ilRp~~v~Gp~~--- 312 (516)
T 3oh8_A 266 ILTEESES-GD-----------------------------DFLAEVCRDWEHATAPASDAGKRVAFIRTGVALSGRG--- 312 (516)
T ss_dssp EECTTSCC-CS-----------------------------SHHHHHHHHHHHTTHHHHHTTCEEEEEEECEEEBTTB---
T ss_pred ccCCCCCC-Cc-----------------------------ChHHHHHHHHHHHHHHHHhCCCCEEEEEeeEEECCCC---
Confidence 45565332 21 7899999999988765544699999999999999853
Q ss_pred CCCCCCCCchHH-HHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHH
Q psy7538 263 PGWTDNINGPTG-LLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEI 341 (543)
Q Consensus 263 ~gw~d~~~g~~~-~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~ 341 (543)
+... ++..+..|.. ...+++++.+++||++|+|++++.++.+... .++||++++ +++|+.|+
T Consensus 313 --------~~~~~~~~~~~~g~~-~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~------~g~~ni~~~--~~~s~~el 375 (516)
T 3oh8_A 313 --------GMLPLLKTLFSTGLG-GKFGDGTSWFSWIAIDDLTDIYYRAIVDAQI------SGPINAVAP--NPVSNADM 375 (516)
T ss_dssp --------SHHHHHHHTTC---C-CCCTTSCCEECEEEHHHHHHHHHHHHHCTTC------CEEEEESCS--CCEEHHHH
T ss_pred --------ChHHHHHHHHHhCCC-cccCCCCceEceEeHHHHHHHHHHHHhCccc------CCcEEEECC--CCCCHHHH
Confidence 1122 3333333433 3578889999999999999999999987654 558999998 89999999
Q ss_pred HHHHhhhhcCc
Q psy7538 342 CDIGKDIVTSK 352 (543)
Q Consensus 342 ~~~i~~~~G~~ 352 (543)
++.+.+.+|..
T Consensus 376 ~~~i~~~~g~~ 386 (516)
T 3oh8_A 376 TKILATSMHRP 386 (516)
T ss_dssp HHHTTC-----
T ss_pred HHHHHHHhCCC
Confidence 99999998654
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-28 Score=246.03 Aligned_cols=218 Identities=18% Similarity=0.257 Sum_probs=171.7
Q ss_pred CEEEEEcCcchhHHHHHHHHHhh--CCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRL--EPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~--g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
|+|+|||||||||++++++|++. |+ +|++++|+.... +.+. ..+++++.+|++
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~---~V~~~~r~~~~~---~~l~-------------------~~~~~~~~~D~~ 55 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPAS---QIIAIVRNVEKA---STLA-------------------DQGVEVRHGDYN 55 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGG---GEEEEESCTTTT---HHHH-------------------HTTCEEEECCTT
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCC---eEEEEEcCHHHH---hHHh-------------------hcCCeEEEeccC
Confidence 57999999999999999999998 65 789999975431 1110 136789999999
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCcccccc
Q psy7538 109 QLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERT 188 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i~E~~ 188 (543)
+++ ++..+++++|+|||+||.. .. . ++|+.++.+++++|++. ++++|||+||.+++..
T Consensus 56 d~~------~l~~~~~~~d~vi~~a~~~-~~---~---~~n~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~~~-------- 113 (287)
T 2jl1_A 56 QPE------SLQKAFAGVSKLLFISGPH-YD---N---TLLIVQHANVVKAARDA-GVKHIAYTGYAFAEES-------- 113 (287)
T ss_dssp CHH------HHHHHTTTCSEEEECCCCC-SC---H---HHHHHHHHHHHHHHHHT-TCSEEEEEEETTGGGC--------
T ss_pred CHH------HHHHHHhcCCEEEEcCCCC-cC---c---hHHHHHHHHHHHHHHHc-CCCEEEEECCCCCCCC--------
Confidence 875 7999999999999999963 21 1 67999999999999997 8999999999876310
Q ss_pred cCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCCCCCCC
Q psy7538 189 YLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPGWTDN 268 (543)
Q Consensus 189 y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~gw~d~ 268 (543)
|..|+.+|..+|+++++. +++++++||+.++|+.. +.+
T Consensus 114 ---------------------------------~~~y~~~K~~~E~~~~~~---~~~~~ilrp~~~~~~~~---~~~--- 151 (287)
T 2jl1_A 114 ---------------------------------IIPLAHVHLATEYAIRTT---NIPYTFLRNALYTDFFV---NEG--- 151 (287)
T ss_dssp ---------------------------------CSTHHHHHHHHHHHHHHT---TCCEEEEEECCBHHHHS---SGG---
T ss_pred ---------------------------------CCchHHHHHHHHHHHHHc---CCCeEEEECCEeccccc---hhh---
Confidence 157999999999999763 89999999998887531 111
Q ss_pred CCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHHHHHhhh
Q psy7538 269 INGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEICDIGKDI 348 (543)
Q Consensus 269 ~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~~~i~~~ 348 (543)
+......|.. ..+.++...++++++|+|++++.++..+.. .+++||++++ +++|+.|+++.+.+.
T Consensus 152 ------~~~~~~~~~~--~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~-----~g~~~~i~~~--~~~s~~e~~~~i~~~ 216 (287)
T 2jl1_A 152 ------LRASTESGAI--VTNAGSGIVNSVTRNELALAAATVLTEEGH-----ENKTYNLVSN--QPWTFDELAQILSEV 216 (287)
T ss_dssp ------GHHHHHHTEE--EESCTTCCBCCBCHHHHHHHHHHHHTSSSC-----TTEEEEECCS--SCBCHHHHHHHHHHH
T ss_pred ------HHHHhhCCce--eccCCCCccCccCHHHHHHHHHHHhcCCCC-----CCcEEEecCC--CcCCHHHHHHHHHHH
Confidence 1112223433 245677889999999999999999876433 4789999998 899999999999999
Q ss_pred hcCc
Q psy7538 349 VTSK 352 (543)
Q Consensus 349 ~G~~ 352 (543)
+|.+
T Consensus 217 ~g~~ 220 (287)
T 2jl1_A 217 SGKK 220 (287)
T ss_dssp HSSC
T ss_pred HCCc
Confidence 9654
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-29 Score=260.85 Aligned_cols=218 Identities=19% Similarity=0.188 Sum_probs=176.6
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|||||||||||++|+++|+++|+ .+|++++|. +
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~--~~v~~~d~~-----------------------------------------~-- 35 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTD--HHIFEVHRQ-----------------------------------------T-- 35 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCC--CEEEECCTT-----------------------------------------C--
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC--CEEEEECCC-----------------------------------------C--
Confidence 6899999999999999999999975 144444331 2
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCc-eEEEEecCccccCCCccccccc
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLK-CFTYISTAYCHPSEKVLEERTY 189 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~-~~V~vST~y~~~~~~~i~E~~y 189 (543)
+++++..+++++|+|||+||..+.. ......++|+.++.+++++|++. +++ +|||+||+++++.
T Consensus 36 ----d~~~l~~~~~~~d~Vih~a~~~~~~-~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~Ss~~~~~~--------- 100 (369)
T 3st7_A 36 ----KEEELESALLKADFIVHLAGVNRPE-HDKEFSLGNVSYLDHVLDILTRN-TKKPAILLSSSIQATQD--------- 100 (369)
T ss_dssp ----CHHHHHHHHHHCSEEEECCCSBCTT-CSTTCSSSCCBHHHHHHHHHTTC-SSCCEEEEEEEGGGGSC---------
T ss_pred ----CHHHHHHHhccCCEEEECCcCCCCC-CHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEeCchhhcCC---------
Confidence 2357888899999999999987643 34567889999999999999998 666 9999999987651
Q ss_pred CCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCCCCCCCCCC
Q psy7538 190 LPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKEPLPGWTDN 268 (543)
Q Consensus 190 ~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~p~~gw~d~ 268 (543)
+.|+.+|+.+|++++++.+ .+++++|+||++|||++..| +
T Consensus 101 ---------------------------------~~Y~~sK~~~E~~~~~~~~~~g~~~~i~R~~~v~G~~~~~------~ 141 (369)
T 3st7_A 101 ---------------------------------NPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKP------N 141 (369)
T ss_dssp ---------------------------------SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCT------T
T ss_pred ---------------------------------CCchHHHHHHHHHHHHHHHHhCCCEEEEECCceeCCCCCC------C
Confidence 8999999999999999876 68999999999999998765 2
Q ss_pred CCch-HHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHHHHHhh
Q psy7538 269 INGP-TGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEICDIGKD 347 (543)
Q Consensus 269 ~~g~-~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~~~i~~ 347 (543)
..+. ..++..+..|.... .++++..++++|+||+|++++.++..... ..+++||++++ +++|+.|+++.+.+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~v~Dva~~~~~~l~~~~~----~~~~~~~i~~~--~~~s~~e~~~~~~~ 214 (369)
T 3st7_A 142 YNSVIATFCYKIARNEEIQ-VNDRNVELTLNYVDDIVAEIKRAIEGTPT----IENGVPTVPNV--FKVTLGEIVDLLYK 214 (369)
T ss_dssp SSCHHHHHHHHHHTTCCCC-CSCTTCEEEEEEHHHHHHHHHHHHHTCCC----EETTEECCSCC--EEEEHHHHHHHHHH
T ss_pred cchHHHHHHHHHHcCCCeE-ecCCCeEEEEEEHHHHHHHHHHHHhCCcc----cCCceEEeCCC--CceeHHHHHHHHHH
Confidence 2233 33555666666544 35789999999999999999999987653 12689999998 89999999999999
Q ss_pred hhcCccC
Q psy7538 348 IVTSKIP 354 (543)
Q Consensus 348 ~~G~~~p 354 (543)
..|.+.+
T Consensus 215 ~~g~~~~ 221 (369)
T 3st7_A 215 FKQSRLD 221 (369)
T ss_dssp HHHHHHH
T ss_pred HhCCCcc
Confidence 9865533
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.8e-27 Score=234.13 Aligned_cols=212 Identities=15% Similarity=0.203 Sum_probs=172.7
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
++|+|+|||||||||++|+++|++.|+ +|+++.|..... ...++.++.+|++
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G~---~V~~~~r~~~~~-------------------------~~~~~~~~~~Dl~ 53 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMAE---ILRLADLSPLDP-------------------------AGPNEECVQCDLA 53 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGEE---EEEEEESSCCCC-------------------------CCTTEEEEECCTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCC---EEEEEecCCccc-------------------------cCCCCEEEEcCCC
Confidence 568999999999999999999999986 899999986432 1357899999999
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccC---CCccc
Q psy7538 109 QLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPS---EKVLE 185 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~---~~~i~ 185 (543)
+++ ++..+++++|+|||+||.. ..++++..+++|+.|+.+++++|++. +.++||++||..+++. ..+++
T Consensus 54 d~~------~~~~~~~~~D~vi~~Ag~~-~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iv~~SS~~~~g~~~~~~~~~ 125 (267)
T 3rft_A 54 DAN------AVNAMVAGCDGIVHLGGIS-VEKPFEQILQGNIIGLYNLYEAARAH-GQPRIVFASSNHTIGYYPQTERLG 125 (267)
T ss_dssp CHH------HHHHHHTTCSEEEECCSCC-SCCCHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGGGGTTSBTTSCBC
T ss_pred CHH------HHHHHHcCCCEEEECCCCc-CcCCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcchHHhCCCCCCCCCC
Confidence 875 8999999999999999984 35667889999999999999999997 7899999999866642 23566
Q ss_pred ccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCCCCCC
Q psy7538 186 ERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKEPLPG 264 (543)
Q Consensus 186 E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~p~~g 264 (543)
|+....|. +.|+.||+.+|.+++.+.. .+++++++||+.|+|+.
T Consensus 126 e~~~~~~~-----------------------------~~Y~~sK~~~e~~~~~~a~~~g~~~~~vr~~~v~~~~------ 170 (267)
T 3rft_A 126 PDVPARPD-----------------------------GLYGVSKCFGENLARMYFDKFGQETALVRIGSCTPEP------ 170 (267)
T ss_dssp TTSCCCCC-----------------------------SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECBCSSSC------
T ss_pred CCCCCCCC-----------------------------ChHHHHHHHHHHHHHHHHHHhCCeEEEEEeecccCCC------
Confidence 65433332 7999999999999988776 69999999999998752
Q ss_pred CCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHH
Q psy7538 265 WTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEIC 342 (543)
Q Consensus 265 w~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~ 342 (543)
.++....++++++|+++++..++..... ...+++++++ ++.+|.++.
T Consensus 171 ------------------------~~~~~~~~~~~~~d~a~~~~~~~~~~~~-----~~~~~~~~s~--~~~~~~~~~ 217 (267)
T 3rft_A 171 ------------------------NNYRMLSTWFSHDDFVSLIEAVFRAPVL-----GCPVVWGASA--NDAGWWDNS 217 (267)
T ss_dssp ------------------------CSTTHHHHBCCHHHHHHHHHHHHHCSCC-----CSCEEEECCC--CTTCCBCCG
T ss_pred ------------------------CCCCceeeEEcHHHHHHHHHHHHhCCCC-----CceEEEEeCC--CCCCcccCh
Confidence 2344567889999999999888876654 3457888887 677776653
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.95 E-value=7.9e-28 Score=230.68 Aligned_cols=209 Identities=14% Similarity=0.177 Sum_probs=166.5
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC-
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ- 109 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~- 109 (543)
|+|+|||||||||++++++|++.|+ +|+++.|+.... ....+++++.+|+++
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~---~V~~~~R~~~~~------------------------~~~~~~~~~~~D~~d~ 53 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDY---QIYAGARKVEQV------------------------PQYNNVKAVHFDVDWT 53 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSC---EEEEEESSGGGS------------------------CCCTTEEEEECCTTSC
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCccch------------------------hhcCCceEEEecccCC
Confidence 6899999999999999999999986 899999986431 112689999999998
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCccccccc
Q psy7538 110 LKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTY 189 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i~E~~y 189 (543)
+ +++..+++++|+|||+||.... ..+++|+.|+.+++++|++. ++++||++||.++.... +..|.
T Consensus 54 ~------~~~~~~~~~~d~vi~~ag~~~~-----~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~~~~~-~~~e~-- 118 (219)
T 3dqp_A 54 P------EEMAKQLHGMDAIINVSGSGGK-----SLLKVDLYGAVKLMQAAEKA-EVKRFILLSTIFSLQPE-KWIGA-- 118 (219)
T ss_dssp H------HHHHTTTTTCSEEEECCCCTTS-----SCCCCCCHHHHHHHHHHHHT-TCCEEEEECCTTTTCGG-GCCSH--
T ss_pred H------HHHHHHHcCCCEEEECCcCCCC-----CcEeEeHHHHHHHHHHHHHh-CCCEEEEECcccccCCC-ccccc--
Confidence 5 4899999999999999998652 26678999999999999997 88999999999776432 12220
Q ss_pred CCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCCCCCCCC
Q psy7538 190 LPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPGWTDNI 269 (543)
Q Consensus 190 ~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~gw~d~~ 269 (543)
...|. +.|+.+|..+|++++ .. .+++++++||+.++|+....
T Consensus 119 ----------------------~~~~~------~~Y~~sK~~~e~~~~-~~-~~i~~~ilrp~~v~g~~~~~-------- 160 (219)
T 3dqp_A 119 ----------------------GFDAL------KDYYIAKHFADLYLT-KE-TNLDYTIIQPGALTEEEATG-------- 160 (219)
T ss_dssp ----------------------HHHHT------HHHHHHHHHHHHHHH-HS-CCCEEEEEEECSEECSCCCS--------
T ss_pred ----------------------ccccc------cHHHHHHHHHHHHHH-hc-cCCcEEEEeCceEecCCCCC--------
Confidence 01111 799999999999996 22 48999999999999974321
Q ss_pred CchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHHHH
Q psy7538 270 NGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEICDI 344 (543)
Q Consensus 270 ~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~~~ 344 (543)
... .++...++++++|+|++++.++.+... .+++||++++ + .+++|+.+.
T Consensus 161 -------------~~~----~~~~~~~~i~~~Dva~~i~~~l~~~~~-----~g~~~~i~~g--~-~~~~e~~~~ 210 (219)
T 3dqp_A 161 -------------LID----INDEVSASNTIGDVADTIKELVMTDHS-----IGKVISMHNG--K-TAIKEALES 210 (219)
T ss_dssp -------------EEE----ESSSCCCCEEHHHHHHHHHHHHTCGGG-----TTEEEEEEEC--S-EEHHHHHHT
T ss_pred -------------ccc----cCCCcCCcccHHHHHHHHHHHHhCccc-----cCcEEEeCCC--C-ccHHHHHHH
Confidence 111 136789999999999999999987654 4789999987 4 899988764
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.9e-27 Score=234.05 Aligned_cols=224 Identities=17% Similarity=0.168 Sum_probs=173.5
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|+|||||||||++++++|++ |+ +|+++.|+... . ++ +.+|++++
T Consensus 1 m~ilVtGatG~iG~~l~~~L~~-g~---~V~~~~r~~~~------------------------~---~~---~~~Dl~~~ 46 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLSE-RH---EVIKVYNSSEI------------------------Q---GG---YKLDLTDF 46 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHTT-TS---CEEEEESSSCC------------------------T---TC---EECCTTSH
T ss_pred CEEEEECCCChhHHHHHHHHhc-CC---eEEEecCCCcC------------------------C---CC---ceeccCCH
Confidence 5799999999999999999995 65 78999997631 1 12 78999986
Q ss_pred CCCCCHHHHHHHhcC--ccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCC-cc
Q psy7538 111 KLGISEIDKKELIDN--VDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEK-VL 184 (543)
Q Consensus 111 ~lgls~~~~~~l~~~--vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~-~i 184 (543)
+ ++..++++ +|+|||+||..... +.....+++|+.|+.+++++|++. +. +|||+||..+++... ++
T Consensus 47 ~------~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~iv~~SS~~~~~~~~~~~ 118 (273)
T 2ggs_A 47 P------RLEDFIIKKRPDVIINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVI-DS-YIVHISTDYVFDGEKGNY 118 (273)
T ss_dssp H------HHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TC-EEEEEEEGGGSCSSSCSB
T ss_pred H------HHHHHHHhcCCCEEEECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHh-CC-eEEEEecceeEcCCCCCc
Confidence 5 78888875 99999999987643 456778999999999999999987 55 899999997765432 55
Q ss_pred cccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCCC
Q psy7538 185 EERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPG 264 (543)
Q Consensus 185 ~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~g 264 (543)
+|+..+.|. +.|+.+|+.+|++++. ++++++||+.|||. .
T Consensus 119 ~e~~~~~~~-----------------------------~~Y~~sK~~~e~~~~~-----~~~~~iR~~~v~G~--~---- 158 (273)
T 2ggs_A 119 KEEDIPNPI-----------------------------NYYGLSKLLGETFALQ-----DDSLIIRTSGIFRN--K---- 158 (273)
T ss_dssp CTTSCCCCS-----------------------------SHHHHHHHHHHHHHCC-----TTCEEEEECCCBSS--S----
T ss_pred CCCCCCCCC-----------------------------CHHHHHHHHHHHHHhC-----CCeEEEeccccccc--c----
Confidence 665433322 7999999999999876 57899999999972 1
Q ss_pred CCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHHHH
Q psy7538 265 WTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEICDI 344 (543)
Q Consensus 265 w~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~~~ 344 (543)
+ ....++..+..|....+.++ ..++++++|+|++++.++.... .++||+++ +++|+.|+++.
T Consensus 159 ---~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~~dva~~i~~~~~~~~-------~g~~~i~~---~~~s~~e~~~~ 220 (273)
T 2ggs_A 159 ---G--FPIYVYKTLKEGKTVFAFKG---YYSPISARKLASAILELLELRK-------TGIIHVAG---ERISRFELALK 220 (273)
T ss_dssp ---S--HHHHHHHHHHTTCCEEEESC---EECCCBHHHHHHHHHHHHHHTC-------CEEEECCC---CCEEHHHHHHH
T ss_pred ---H--HHHHHHHHHHcCCCEEeecC---CCCceEHHHHHHHHHHHHhcCc-------CCeEEECC---CcccHHHHHHH
Confidence 1 11223344556655544443 7899999999999999987643 34999986 57999999999
Q ss_pred HhhhhcCccC
Q psy7538 345 GKDIVTSKIP 354 (543)
Q Consensus 345 i~~~~G~~~p 354 (543)
+.+.+|.+.+
T Consensus 221 ~~~~~g~~~~ 230 (273)
T 2ggs_A 221 IKEKFNLPGE 230 (273)
T ss_dssp HHHHTTCCSC
T ss_pred HHHHhCCChh
Confidence 9999966543
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.7e-27 Score=229.65 Aligned_cols=217 Identities=10% Similarity=0.140 Sum_probs=168.1
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCce-EEEEc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKI-QVISG 105 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v-~~i~g 105 (543)
-++||+|+|||||||||++++++|+++|+ +|+++.|+... ++++ . ..++ +++.+
T Consensus 18 ~l~~~~ilVtGatG~iG~~l~~~L~~~G~---~V~~~~R~~~~------~~~~---------~-------~~~~~~~~~~ 72 (236)
T 3e8x_A 18 YFQGMRVLVVGANGKVARYLLSELKNKGH---EPVAMVRNEEQ------GPEL---------R-------ERGASDIVVA 72 (236)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSGGG------HHHH---------H-------HTTCSEEEEC
T ss_pred CcCCCeEEEECCCChHHHHHHHHHHhCCC---eEEEEECChHH------HHHH---------H-------hCCCceEEEc
Confidence 46799999999999999999999999987 89999997532 1111 0 1267 89999
Q ss_pred cCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCccc
Q psy7538 106 DITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLE 185 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i~ 185 (543)
|++ . ++...+.++|+|||+||.... +.+...+++|+.|+.+++++|++. ++++||++||..+...
T Consensus 73 Dl~-~-------~~~~~~~~~D~vi~~ag~~~~-~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~~~~----- 137 (236)
T 3e8x_A 73 NLE-E-------DFSHAFASIDAVVFAAGSGPH-TGADKTILIDLWGAIKTIQEAEKR-GIKRFIMVSSVGTVDP----- 137 (236)
T ss_dssp CTT-S-------CCGGGGTTCSEEEECCCCCTT-SCHHHHHHTTTHHHHHHHHHHHHH-TCCEEEEECCTTCSCG-----
T ss_pred ccH-H-------HHHHHHcCCCEEEECCCCCCC-CCccccchhhHHHHHHHHHHHHHc-CCCEEEEEecCCCCCC-----
Confidence 999 3 467778899999999997654 557788999999999999999987 7899999999543321
Q ss_pred ccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCCCC
Q psy7538 186 ERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPGW 265 (543)
Q Consensus 186 E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~gw 265 (543)
|..+ . ..+.|+.+|+.+|.+++.. +++++++||+.|+|+...
T Consensus 138 ~~~~----~--------------------------~~~~Y~~sK~~~e~~~~~~---gi~~~~lrpg~v~~~~~~----- 179 (236)
T 3e8x_A 138 DQGP----M--------------------------NMRHYLVAKRLADDELKRS---SLDYTIVRPGPLSNEEST----- 179 (236)
T ss_dssp GGSC----G--------------------------GGHHHHHHHHHHHHHHHHS---SSEEEEEEECSEECSCCC-----
T ss_pred CCCh----h--------------------------hhhhHHHHHHHHHHHHHHC---CCCEEEEeCCcccCCCCC-----
Confidence 1100 0 0179999999999998743 899999999999997431
Q ss_pred CCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHHHHH
Q psy7538 266 TDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEICDIG 345 (543)
Q Consensus 266 ~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~~~i 345 (543)
+.. ....++....++++++|+|++++.++..... .+++||++++ . .++.|+++.+
T Consensus 180 ----------------~~~-~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~-----~g~~~~v~~~--~-~~~~e~~~~i 234 (236)
T 3e8x_A 180 ----------------GKV-TVSPHFSEITRSITRHDVAKVIAELVDQQHT-----IGKTFEVLNG--D-TPIAKVVEQL 234 (236)
T ss_dssp ----------------SEE-EEESSCSCCCCCEEHHHHHHHHHHHTTCGGG-----TTEEEEEEEC--S-EEHHHHHHTC
T ss_pred ----------------CeE-EeccCCCcccCcEeHHHHHHHHHHHhcCccc-----cCCeEEEeCC--C-cCHHHHHHHh
Confidence 111 1234555678999999999999999987654 4889999987 4 8999998876
Q ss_pred h
Q psy7538 346 K 346 (543)
Q Consensus 346 ~ 346 (543)
.
T Consensus 235 ~ 235 (236)
T 3e8x_A 235 G 235 (236)
T ss_dssp -
T ss_pred c
Confidence 4
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.95 E-value=2e-27 Score=234.87 Aligned_cols=218 Identities=15% Similarity=0.206 Sum_probs=173.9
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|||||||||||++|+++|++.|+ +|+++.|..... ...++.++.+|++++
T Consensus 3 ~~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~-------------------------~~~~~~~~~~Dl~d~ 54 (267)
T 3ay3_A 3 NRLLVTGAAGGVGSAIRPHLGTLAH---EVRLSDIVDLGA-------------------------AEAHEEIVACDLADA 54 (267)
T ss_dssp EEEEEESTTSHHHHHHGGGGGGTEE---EEEECCSSCCCC-------------------------CCTTEEECCCCTTCH
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCC---EEEEEeCCCccc-------------------------cCCCccEEEccCCCH
Confidence 6899999999999999999999985 899999976431 113678899999986
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccC---CCccccc
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPS---EKVLEER 187 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~---~~~i~E~ 187 (543)
+ ++..+++++|+|||+|+... .+.+...+++|+.|+.+++++|++. ++++|||+||..+++. ..+++|+
T Consensus 55 ~------~~~~~~~~~d~vi~~a~~~~-~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~~~~~~~~~~~~E~ 126 (267)
T 3ay3_A 55 Q------AVHDLVKDCDGIIHLGGVSV-ERPWNDILQANIIGAYNLYEAARNL-GKPRIVFASSNHTIGYYPRTTRIDTE 126 (267)
T ss_dssp H------HHHHHHTTCSEEEECCSCCS-CCCHHHHHHHTHHHHHHHHHHHHHT-TCCEEEEEEEGGGSTTSBTTSCBCTT
T ss_pred H------HHHHHHcCCCEEEECCcCCC-CCCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEeCCHHHhCCCCCCCCCCCC
Confidence 5 78899999999999999763 4556788999999999999999987 7899999999977653 2356665
Q ss_pred ccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCCCCCCCC
Q psy7538 188 TYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKEPLPGWT 266 (543)
Q Consensus 188 ~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~p~~gw~ 266 (543)
..+.|. +.|+.+|+.+|.+++.+.. .+++++++||+.||+. | .
T Consensus 127 ~~~~~~-----------------------------~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~~~---~--~-- 170 (267)
T 3ay3_A 127 VPRRPD-----------------------------SLYGLSKCFGEDLASLYYHKFDIETLNIRIGSCFPK---P--K-- 170 (267)
T ss_dssp SCCCCC-----------------------------SHHHHHHHHHHHHHHHHHHTTCCCEEEEEECBCSSS---C--C--
T ss_pred CCCCCC-----------------------------ChHHHHHHHHHHHHHHHHHHcCCCEEEEeceeecCC---C--C--
Confidence 433332 7999999999999988765 6899999999999842 1 0
Q ss_pred CCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHHHHHh
Q psy7538 267 DNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEICDIGK 346 (543)
Q Consensus 267 d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~~~i~ 346 (543)
+++...++++++|+|++++.++..... ...+||+.++ .+.++.++.+.
T Consensus 171 -----------------------~~~~~~~~~~~~dva~~~~~~~~~~~~-----~~~~~~~~~~--~~~~~~d~~~~-- 218 (267)
T 3ay3_A 171 -----------------------DARMMATWLSVDDFMRLMKRAFVAPKL-----GCTVVYGASA--NTESWWDNDKS-- 218 (267)
T ss_dssp -----------------------SHHHHHHBCCHHHHHHHHHHHHHSSCC-----CEEEEEECCS--CSSCCBCCGGG--
T ss_pred -----------------------CCCeeeccccHHHHHHHHHHHHhCCCC-----CceeEecCCC--ccccccCHHHH--
Confidence 112356899999999999998876543 2568999877 67888888776
Q ss_pred hhhcCc
Q psy7538 347 DIVTSK 352 (543)
Q Consensus 347 ~~~G~~ 352 (543)
+.+|.+
T Consensus 219 ~~lg~~ 224 (267)
T 3ay3_A 219 AFLGWV 224 (267)
T ss_dssp GGGCCC
T ss_pred HHcCCC
Confidence 666443
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3e-27 Score=235.53 Aligned_cols=214 Identities=16% Similarity=0.173 Sum_probs=164.0
Q ss_pred EEEEEcCcchhHHHHHHHHHhh--CCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 32 SIFLSGGSGFLGKVLIEKILRL--EPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 32 ~VlITGatGFiG~~Lv~~Ll~~--g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+|+|||||||||++++++|++. |+ +|++++|+.... +.+. ..++.++.+|+++
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~---~V~~~~r~~~~~---~~~~-------------------~~~~~~~~~D~~d 55 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPAS---QIVAIVRNPAKA---QALA-------------------AQGITVRQADYGD 55 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGG---GEEEEESCTTTC---HHHH-------------------HTTCEEEECCTTC
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCc---eEEEEEcChHhh---hhhh-------------------cCCCeEEEcCCCC
Confidence 5899999999999999999998 65 789999976432 1110 1357889999998
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCccccccc
Q psy7538 110 LKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTY 189 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i~E~~y 189 (543)
++ ++..+++++|+|||+|+... ..|+.++.+++++|++. ++++|||+||..++.
T Consensus 56 ~~------~~~~~~~~~d~vi~~a~~~~---------~~~~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~~---------- 109 (286)
T 2zcu_A 56 EA------ALTSALQGVEKLLLISSSEV---------GQRAPQHRNVINAAKAA-GVKFIAYTSLLHADT---------- 109 (286)
T ss_dssp HH------HHHHHTTTCSEEEECC-----------------CHHHHHHHHHHHH-TCCEEEEEEETTTTT----------
T ss_pred HH------HHHHHHhCCCEEEEeCCCCc---------hHHHHHHHHHHHHHHHc-CCCEEEEECCCCCCC----------
Confidence 75 79999999999999998521 25889999999999997 899999999986641
Q ss_pred CCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCCCCCCCC
Q psy7538 190 LPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPGWTDNI 269 (543)
Q Consensus 190 ~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~gw~d~~ 269 (543)
.|..|+.+|..+|+++.+. +++++++||+.++++.. .
T Consensus 110 -------------------------------~~~~y~~sK~~~e~~~~~~---~~~~~ilrp~~~~~~~~----~----- 146 (286)
T 2zcu_A 110 -------------------------------SPLGLADEHIETEKMLADS---GIVYTLLRNGWYSENYL----A----- 146 (286)
T ss_dssp -------------------------------CCSTTHHHHHHHHHHHHHH---CSEEEEEEECCBHHHHH----T-----
T ss_pred -------------------------------CcchhHHHHHHHHHHHHHc---CCCeEEEeChHHhhhhH----H-----
Confidence 0157999999999999764 89999999987665421 0
Q ss_pred CchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHHHHHhhhh
Q psy7538 270 NGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEICDIGKDIV 349 (543)
Q Consensus 270 ~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~~~i~~~~ 349 (543)
.+......+.. ..++++...++++++|+|++++.++..+.. .+++||++++ +++|+.|+++.+.+.+
T Consensus 147 ----~~~~~~~~~~~--~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~-----~g~~~~i~~~--~~~s~~e~~~~i~~~~ 213 (286)
T 2zcu_A 147 ----SAPAALEHGVF--IGAAGDGKIASATRADYAAAAARVISEAGH-----EGKVYELAGD--SAWTLTQLAAELTKQS 213 (286)
T ss_dssp ----THHHHHHHTEE--EESCTTCCBCCBCHHHHHHHHHHHHHSSSC-----TTCEEEECCS--SCBCHHHHHHHHHHHH
T ss_pred ----HhHHhhcCCce--eccCCCCccccccHHHHHHHHHHHhcCCCC-----CCceEEEeCC--CcCCHHHHHHHHHHHH
Confidence 01112223433 255678899999999999999998876433 4789999988 8899999999999999
Q ss_pred cCc
Q psy7538 350 TSK 352 (543)
Q Consensus 350 G~~ 352 (543)
|.+
T Consensus 214 g~~ 216 (286)
T 2zcu_A 214 GKQ 216 (286)
T ss_dssp SSC
T ss_pred CCC
Confidence 654
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.2e-26 Score=236.26 Aligned_cols=234 Identities=14% Similarity=0.162 Sum_probs=174.4
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCH-HHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTP-NQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~-~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
+++|+|+|||||||+|++|++.|++.|+ +|++++|+...... .++++++ ...+++++.+|
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~---~V~~l~R~~~~~~~~~~~~~~l----------------~~~~v~~~~~D 68 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHR---PTYILARPGPRSPSKAKIFKAL----------------EDKGAIIVYGL 68 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTC---CEEEEECSSCCCHHHHHHHHHH----------------HHTTCEEEECC
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCC---CEEEEECCCCCChhHHHHHHHH----------------HhCCcEEEEee
Confidence 4468999999999999999999999986 78999998743211 1112121 12478999999
Q ss_pred CCCCCCCCCHHHHHHHhc--CccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCcc
Q psy7538 107 ITQLKLGISEIDKKELID--NVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVL 184 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~--~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i 184 (543)
+++++ ++..+++ ++|+|||+||.. |+.++.+++++|++.+++++||+ | .|+.. .
T Consensus 69 l~d~~------~l~~~~~~~~~d~Vi~~a~~~------------n~~~~~~l~~aa~~~g~v~~~v~-S-~~g~~----~ 124 (346)
T 3i6i_A 69 INEQE------AMEKILKEHEIDIVVSTVGGE------------SILDQIALVKAMKAVGTIKRFLP-S-EFGHD----V 124 (346)
T ss_dssp TTCHH------HHHHHHHHTTCCEEEECCCGG------------GGGGHHHHHHHHHHHCCCSEEEC-S-CCSSC----T
T ss_pred cCCHH------HHHHHHhhCCCCEEEECCchh------------hHHHHHHHHHHHHHcCCceEEee-c-ccCCC----C
Confidence 99865 8999999 999999999873 88899999999999833999986 4 34321 2
Q ss_pred cccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCCC
Q psy7538 185 EERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPG 264 (543)
Q Consensus 185 ~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~g 264 (543)
+|.. |..|. +.|+.+|+.+|+++++. +++++++||+.++|.....
T Consensus 125 ~e~~---~~~p~--------------------------~~y~~sK~~~e~~l~~~---g~~~tivrpg~~~g~~~~~--- 169 (346)
T 3i6i_A 125 NRAD---PVEPG--------------------------LNMYREKRRVRQLVEES---GIPFTYICCNSIASWPYYN--- 169 (346)
T ss_dssp TTCC---CCTTH--------------------------HHHHHHHHHHHHHHHHT---TCCBEEEECCEESSCCCSC---
T ss_pred CccC---cCCCc--------------------------chHHHHHHHHHHHHHHc---CCCEEEEEecccccccCcc---
Confidence 2321 11111 78999999999999874 8999999999999964321
Q ss_pred CCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeec-CCCCcccHHHHHH
Q psy7538 265 WTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTS-NKDYKITWQEICD 343 (543)
Q Consensus 265 w~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s-~~~~~~t~~e~~~ 343 (543)
+..+ ......+....++++++..+++|+++|+|++++.++..+.. .+++||+++ + +++|+.|+++
T Consensus 170 ----~~~~---~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~-----~~~~~~i~g~~--~~~s~~e~~~ 235 (346)
T 3i6i_A 170 ----NIHP---SEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRT-----LNKSVHFRPSC--NCLNINELAS 235 (346)
T ss_dssp ----C--------CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGGG-----TTEEEECCCGG--GEECHHHHHH
T ss_pred ----cccc---ccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCccc-----cCeEEEEeCCC--CCCCHHHHHH
Confidence 1111 11122344456788999999999999999999999987654 367888873 4 7899999999
Q ss_pred HHhhhhcCcc
Q psy7538 344 IGKDIVTSKI 353 (543)
Q Consensus 344 ~i~~~~G~~~ 353 (543)
.+.+.+|.+.
T Consensus 236 ~~~~~~g~~~ 245 (346)
T 3i6i_A 236 VWEKKIGRTL 245 (346)
T ss_dssp HHHHHHTSCC
T ss_pred HHHHHHCCCC
Confidence 9999996653
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=8.8e-26 Score=220.30 Aligned_cols=230 Identities=13% Similarity=0.112 Sum_probs=169.2
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhh--CCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRL--EPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~--g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
++|+|+|||||||||++++++|++. |+ +|+++.|+. ++++++ ..++.++.+|
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~---~V~~~~r~~------~~~~~~-----------------~~~~~~~~~D 56 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKF---VAKGLVRSA------QGKEKI-----------------GGEADVFIGD 56 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTC---EEEEEESCH------HHHHHT-----------------TCCTTEEECC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCc---EEEEEEcCC------Cchhhc-----------------CCCeeEEEec
Confidence 5789999999999999999999999 54 899999964 222111 2356788999
Q ss_pred CCCCCCCCCHHHHHHHhcCccEEEEcCccCCCc----------------ccHHHHHHHHHHHHHHHHHHHHhccCCceEE
Q psy7538 107 ITQLKLGISEIDKKELIDNVDIVYHVAATIRFD----------------EPIKTAVILNTRGTRDMLELSKQMKNLKCFT 170 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~----------------~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V 170 (543)
+++++ ++..+++++|+|||+||..... +.....+++|+.++.+++++|++. ++++||
T Consensus 57 ~~d~~------~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv 129 (253)
T 1xq6_A 57 ITDAD------SINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-GVKHIV 129 (253)
T ss_dssp TTSHH------HHHHHHTTCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-TCSEEE
T ss_pred CCCHH------HHHHHHcCCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc-CCCEEE
Confidence 99865 8999999999999999965321 111246799999999999999997 789999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEe
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILR 250 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlR 250 (543)
++||..+.....+ ..+. . .+.|+.+|..+|.+++.. +++++++|
T Consensus 130 ~~SS~~~~~~~~~---------~~~~------------------~------~~~y~~sK~~~e~~~~~~---~i~~~~vr 173 (253)
T 1xq6_A 130 VVGSMGGTNPDHP---------LNKL------------------G------NGNILVWKRKAEQYLADS---GTPYTIIR 173 (253)
T ss_dssp EEEETTTTCTTCG---------GGGG------------------G------GCCHHHHHHHHHHHHHTS---SSCEEEEE
T ss_pred EEcCccCCCCCCc---------cccc------------------c------chhHHHHHHHHHHHHHhC---CCceEEEe
Confidence 9999976422111 0000 0 046888999999998753 89999999
Q ss_pred cCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeec
Q psy7538 251 PSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTS 330 (543)
Q Consensus 251 ps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s 330 (543)
|+.|+|+..... ..+ .+....+.+ ...++++++|+|++++.++..... .+++||+++
T Consensus 174 pg~v~~~~~~~~-~~~--------------~~~~~~~~~---~~~~~~~~~Dva~~~~~~~~~~~~-----~g~~~~i~~ 230 (253)
T 1xq6_A 174 AGGLLDKEGGVR-ELL--------------VGKDDELLQ---TDTKTVPRADVAEVCIQALLFEEA-----KNKAFDLGS 230 (253)
T ss_dssp ECEEECSCSSSS-CEE--------------EESTTGGGG---SSCCEEEHHHHHHHHHHHTTCGGG-----TTEEEEEEE
T ss_pred cceeecCCcchh-hhh--------------ccCCcCCcC---CCCcEEcHHHHHHHHHHHHcCccc-----cCCEEEecC
Confidence 999999854210 000 000000111 135689999999999999887543 478999998
Q ss_pred CCC-CcccHHHHHHHHhhhhc
Q psy7538 331 NKD-YKITWQEICDIGKDIVT 350 (543)
Q Consensus 331 ~~~-~~~t~~e~~~~i~~~~G 350 (543)
+.. +++|+.|+++.+.+.+|
T Consensus 231 ~~~~~~~s~~e~~~~~~~~~g 251 (253)
T 1xq6_A 231 KPEGTSTPTKDFKALFSQVTS 251 (253)
T ss_dssp CCTTTSCCCCCHHHHHHTCCC
T ss_pred CCcCCCCCHHHHHHHHHHHhC
Confidence 631 46999999999998874
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.9e-25 Score=220.90 Aligned_cols=217 Identities=15% Similarity=0.151 Sum_probs=164.4
Q ss_pred CEEEEEcCcchhHHHHHHHHHhh-CCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRL-EPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~-g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
|+|+|||||||||++++++|++. |+ +|++++|+..... .....+++++.+|+++
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~---~V~~~~R~~~~~~----------------------~~~~~~v~~~~~D~~d 55 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHID---HFHIGVRNVEKVP----------------------DDWRGKVSVRQLDYFN 55 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCT---TEEEEESSGGGSC----------------------GGGBTTBEEEECCTTC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCC---cEEEEECCHHHHH----------------------HhhhCCCEEEEcCCCC
Confidence 67999999999999999999887 65 7899999864321 1123578999999998
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCccccccc
Q psy7538 110 LKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTY 189 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i~E~~y 189 (543)
++ ++..+++++|+|||+|+..... ..|+.++++++++|++. ++++|||+||......
T Consensus 56 ~~------~l~~~~~~~d~vi~~a~~~~~~-------~~~~~~~~~l~~aa~~~-gv~~iv~~Ss~~~~~~--------- 112 (289)
T 3e48_A 56 QE------SMVEAFKGMDTVVFIPSIIHPS-------FKRIPEVENLVYAAKQS-GVAHIIFIGYYADQHN--------- 112 (289)
T ss_dssp HH------HHHHHTTTCSEEEECCCCCCSH-------HHHHHHHHHHHHHHHHT-TCCEEEEEEESCCSTT---------
T ss_pred HH------HHHHHHhCCCEEEEeCCCCccc-------hhhHHHHHHHHHHHHHc-CCCEEEEEcccCCCCC---------
Confidence 75 8999999999999999976432 34899999999999998 8999999999532110
Q ss_pred CCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCCCCCCCC
Q psy7538 190 LPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPGWTDNI 269 (543)
Q Consensus 190 ~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~gw~d~~ 269 (543)
.| ..+...+..+|..+.+. +++++++||+.++|+..
T Consensus 113 -~~------------------------------~~~~~~~~~~e~~~~~~---g~~~~ilrp~~~~~~~~---------- 148 (289)
T 3e48_A 113 -NP------------------------------FHMSPYFGYASRLLSTS---GIDYTYVRMAMYMDPLK---------- 148 (289)
T ss_dssp -CC------------------------------STTHHHHHHHHHHHHHH---CCEEEEEEECEESTTHH----------
T ss_pred -CC------------------------------CccchhHHHHHHHHHHc---CCCEEEEeccccccccH----------
Confidence 00 11222223556655544 89999999999987521
Q ss_pred CchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHHHHHhhhh
Q psy7538 270 NGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEICDIGKDIV 349 (543)
Q Consensus 270 ~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~~~i~~~~ 349 (543)
..+.....+.. ...+.++...++|+++|+|++++.++..+.. .+++||++ + +++|+.|+++.+.+.+
T Consensus 149 ----~~~~~~~~~~~-~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~-----~g~~~~~~-~--~~~s~~e~~~~~~~~~ 215 (289)
T 3e48_A 149 ----PYLPELMNMHK-LIYPAGDGRINYITRNDIARGVIAIIKNPDT-----WGKRYLLS-G--YSYDMKELAAILSEAS 215 (289)
T ss_dssp ----HHHHHHHHHTE-ECCCCTTCEEEEECHHHHHHHHHHHHHCGGG-----TTCEEEEC-C--EEEEHHHHHHHHHHHH
T ss_pred ----HHHHHHHHCCC-EecCCCCceeeeEEHHHHHHHHHHHHcCCCc-----CCceEEeC-C--CcCCHHHHHHHHHHHH
Confidence 12222222222 2356678999999999999999999887664 37899999 8 8999999999999999
Q ss_pred cCc
Q psy7538 350 TSK 352 (543)
Q Consensus 350 G~~ 352 (543)
|.+
T Consensus 216 g~~ 218 (289)
T 3e48_A 216 GTE 218 (289)
T ss_dssp TSC
T ss_pred CCc
Confidence 664
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.93 E-value=9.9e-26 Score=216.39 Aligned_cols=214 Identities=9% Similarity=0.026 Sum_probs=153.8
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|+|||||||||++++++|+++|+ +|++++|+.. ++.++ ...+++++.+|++++
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~---~V~~~~R~~~------~~~~~----------------~~~~~~~~~~D~~d~ 55 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGH---EVLAVVRDPQ------KAADR----------------LGATVATLVKEPLVL 55 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHH------HHHHH----------------TCTTSEEEECCGGGC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCC---EEEEEEeccc------ccccc----------------cCCCceEEecccccc
Confidence 6899999999999999999999986 8999999742 22221 124788999999998
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCC-----ccc
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEK-----VLE 185 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~-----~i~ 185 (543)
+ + ..++++|+|||+||...... ..++|+.++++++++|++. + ++||++||+.+..... ..+
T Consensus 56 ~------~--~~~~~~d~vi~~ag~~~~~~----~~~~n~~~~~~l~~a~~~~-~-~~~v~~SS~~~~~~~~~~~~~~~~ 121 (224)
T 3h2s_A 56 T------E--ADLDSVDAVVDALSVPWGSG----RGYLHLDFATHLVSLLRNS-D-TLAVFILGSASLAMPGADHPMILD 121 (224)
T ss_dssp C------H--HHHTTCSEEEECCCCCTTSS----CTHHHHHHHHHHHHTCTTC-C-CEEEEECCGGGSBCTTCSSCGGGG
T ss_pred c------H--hhcccCCEEEECCccCCCcc----hhhHHHHHHHHHHHHHHHc-C-CcEEEEecceeeccCCCCcccccc
Confidence 7 3 67789999999999862212 2467999999999999998 6 9999999974432211 222
Q ss_pred ccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCCCCCC
Q psy7538 186 ERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKEPLPG 264 (543)
Q Consensus 186 E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~p~~g 264 (543)
|...+.| .+.|+.+|..+|.+ ....+ .+++++++||+.|||+... .+
T Consensus 122 ~~~~~~~-----------------------------~~~y~~sK~~~e~~-~~~~~~~~i~~~ivrp~~v~g~~~~--~~ 169 (224)
T 3h2s_A 122 FPESAAS-----------------------------QPWYDGALYQYYEY-QFLQMNANVNWIGISPSEAFPSGPA--TS 169 (224)
T ss_dssp CCGGGGG-----------------------------STTHHHHHHHHHHH-HHHTTCTTSCEEEEEECSBCCCCCC--CC
T ss_pred CCCCCcc-----------------------------chhhHHHHHHHHHH-HHHHhcCCCcEEEEcCccccCCCcc--cC
Confidence 2222211 17899999999954 44433 6899999999999998321 11
Q ss_pred CCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccH
Q psy7538 265 WTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITW 338 (543)
Q Consensus 265 w~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~ 338 (543)
+. .+... ...+....++++++|+|++++.++.++.. .+++|++++. ++..+
T Consensus 170 ~~--------------~~~~~--~~~~~~~~~~i~~~DvA~~~~~~l~~~~~-----~g~~~~~~~~--~~~~~ 220 (224)
T 3h2s_A 170 YV--------------AGKDT--LLVGEDGQSHITTGNMALAILDQLEHPTA-----IRDRIVVRDA--DLEHH 220 (224)
T ss_dssp EE--------------EESSB--CCCCTTSCCBCCHHHHHHHHHHHHHSCCC-----TTSEEEEEEC--C----
T ss_pred ce--------------ecccc--cccCCCCCceEeHHHHHHHHHHHhcCccc-----cCCEEEEecC--cchhc
Confidence 10 01001 11234567999999999999999988765 5889999987 44443
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.8e-25 Score=210.89 Aligned_cols=216 Identities=11% Similarity=0.071 Sum_probs=142.7
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|+|||||||||++++++|+++|+ +|++++|+.. ++.++ . .++.++.+|++++
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~---~V~~~~R~~~------~~~~~--------------~---~~~~~~~~D~~d~ 54 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGH---EVTAIVRNAG------KITQT--------------H---KDINILQKDIFDL 54 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCSH------HHHHH--------------C---SSSEEEECCGGGC
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCC---EEEEEEcCch------hhhhc--------------c---CCCeEEeccccCh
Confidence 6899999999999999999999986 8999999752 22211 1 5788999999998
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCC---ccccc
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEK---VLEER 187 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~---~i~E~ 187 (543)
+ + ..+.++|+|||+|+..... .+.|+.++++++++|++. +.+++|++||..+..... ...|+
T Consensus 55 ~------~--~~~~~~d~vi~~ag~~~~~------~~~~~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~ 119 (221)
T 3ew7_A 55 T------L--SDLSDQNVVVDAYGISPDE------AEKHVTSLDHLISVLNGT-VSPRLLVVGGAASLQIDEDGNTLLES 119 (221)
T ss_dssp C------H--HHHTTCSEEEECCCSSTTT------TTSHHHHHHHHHHHHCSC-CSSEEEEECCCC--------------
T ss_pred h------h--hhhcCCCEEEECCcCCccc------cchHHHHHHHHHHHHHhc-CCceEEEEecceEEEcCCCCcccccc
Confidence 7 3 6678999999999985322 456999999999999997 789999999985543211 22222
Q ss_pred ccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHh-hcCCcEEEEecCeeeecCCCCCCCCC
Q psy7538 188 TYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECM-ELGMPCMILRPSIVVPIYKEPLPGWT 266 (543)
Q Consensus 188 ~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~-~~~lp~~IlRps~V~G~~~~p~~gw~ 266 (543)
..+.| .+.|+.+|..+|.+..... ..+++++++||+.|||+.. ..+.
T Consensus 120 ~~~~~-----------------------------~~~y~~~k~~~e~~~~~~~~~~gi~~~ivrp~~v~g~~~--~~~~- 167 (221)
T 3ew7_A 120 KGLRE-----------------------------APYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFEPGE--RTGD- 167 (221)
T ss_dssp ----------------------------------CCCSCCHHHHHHHHHHHHTTTTTSCEEEEECSSCCCCC--------
T ss_pred CCCCC-----------------------------HHHHHHHHHHHHHHHHHHhhccCccEEEEeCcceecCCC--ccCc-
Confidence 11111 1679999999999733332 2489999999999999832 1110
Q ss_pred CCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHH
Q psy7538 267 DNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQE 340 (543)
Q Consensus 267 d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e 340 (543)
+ . .. +....+.+++ .++|+++|+|++++.++.++.. .+++||++++ .+.+..|
T Consensus 168 --------~-~-~~-~~~~~~~~~~---~~~i~~~Dva~~~~~~l~~~~~-----~g~~~~~~~~--~~~~~~~ 220 (221)
T 3ew7_A 168 --------Y-Q-IG-KDHLLFGSDG---NSFISMEDYAIAVLDEIERPNH-----LNEHFTVAGK--LEHHHHH 220 (221)
T ss_dssp ------------------------------CCCHHHHHHHHHHHHHSCSC-----TTSEEECCC----------
T ss_pred --------e-E-ec-cccceecCCC---CceEeHHHHHHHHHHHHhCccc-----cCCEEEECCC--Ccccccc
Confidence 0 0 01 1111222222 3689999999999999988765 5889999987 5555443
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-25 Score=214.61 Aligned_cols=207 Identities=16% Similarity=0.147 Sum_probs=158.5
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
.+|+|+|||||||||++++++|+++|+ ..+|+++.|+... ...+++++.+|++
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~-~~~V~~~~r~~~~--------------------------~~~~~~~~~~D~~ 56 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPT-LAKVIAPARKALA--------------------------EHPRLDNPVGPLA 56 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTT-CCEEECCBSSCCC--------------------------CCTTEECCBSCHH
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCC-CCeEEEEeCCCcc--------------------------cCCCceEEecccc
Confidence 468999999999999999999999975 2378999997642 1246788899998
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCccccc
Q psy7538 109 QLKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEER 187 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i~E~ 187 (543)
+++ ++..++ +|+|||+|+.... .+..+..+++|+.++.+++++|++. ++++||++||..++..
T Consensus 57 ~~~------~~~~~~--~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~~~------- 120 (215)
T 2a35_A 57 ELL------PQLDGS--IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEM-GARHYLVVSALGADAK------- 120 (215)
T ss_dssp HHG------GGCCSC--CSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTT-------
T ss_pred CHH------HHHHhh--hcEEEECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHc-CCCEEEEECCcccCCC-------
Confidence 764 455555 9999999997643 2456778999999999999999997 8899999999876532
Q ss_pred ccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCc-EEEEecCeeeecCCCCCCCCC
Q psy7538 188 TYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMP-CMILRPSIVVPIYKEPLPGWT 266 (543)
Q Consensus 188 ~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp-~~IlRps~V~G~~~~p~~gw~ 266 (543)
| ++.|+.+|..+|++++.. +++ ++++||+.+||+...+ .+.
T Consensus 121 ----~-----------------------------~~~y~~sK~~~e~~~~~~---~~~~~~~vrp~~v~g~~~~~--~~~ 162 (215)
T 2a35_A 121 ----S-----------------------------SIFYNRVKGELEQALQEQ---GWPQLTIARPSLLFGPREEF--RLA 162 (215)
T ss_dssp ----C-----------------------------SSHHHHHHHHHHHHHTTS---CCSEEEEEECCSEESTTSCE--EGG
T ss_pred ----C-----------------------------ccHHHHHHHHHHHHHHHc---CCCeEEEEeCceeeCCCCcc--hHH
Confidence 1 178999999999998775 899 9999999999986542 121
Q ss_pred CCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHH
Q psy7538 267 DNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQ 339 (543)
Q Consensus 267 d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~ 339 (543)
..+ . +....+ ++ ...++++++|+|++++.++.++. +++||++++ +++++.
T Consensus 163 ~~~----------~-~~~~~~-~~--~~~~~i~~~Dva~~~~~~~~~~~-------~~~~~i~~~--~~~~~~ 212 (215)
T 2a35_A 163 EIL----------A-APIARI-LP--GKYHGIEACDLARALWRLALEEG-------KGVRFVESD--ELRKLG 212 (215)
T ss_dssp GGT----------T-CCCC-------CHHHHHHHHHHHHHHHHHHTCCC-------SEEEEEEHH--HHHHHH
T ss_pred HHH----------H-Hhhhhc-cC--CCcCcEeHHHHHHHHHHHHhcCC-------CCceEEcHH--HHHHhh
Confidence 111 1 111111 22 27799999999999999886542 569999987 666554
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.92 E-value=2.4e-24 Score=209.31 Aligned_cols=211 Identities=20% Similarity=0.170 Sum_probs=158.5
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+|||||||||++++++|++.|+. .+|+++.|+...... ....++.++.+|+
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~-~~V~~~~r~~~~~~~----------------------~~~~~~~~~~~D~ 72 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLF-SKVTLIGRRKLTFDE----------------------EAYKNVNQEVVDF 72 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCC-SEEEEEESSCCCCCS----------------------GGGGGCEEEECCG
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCC-CEEEEEEcCCCCccc----------------------cccCCceEEecCc
Confidence 57899999999999999999999999852 278899998653210 0123678899999
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCccccc
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEER 187 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i~E~ 187 (543)
++++ ++..+++++|+|||+||........+..+++|+.|+.+++++|++. ++++||++||..++...
T Consensus 73 ~d~~------~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~~~iv~~SS~~~~~~~------ 139 (242)
T 2bka_A 73 EKLD------DYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAG-GCKHFNLLSSKGADKSS------ 139 (242)
T ss_dssp GGGG------GGGGGGSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTTC------
T ss_pred CCHH------HHHHHhcCCCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHC-CCCEEEEEccCcCCCCC------
Confidence 9876 7888889999999999976544556678999999999999999987 78999999999765320
Q ss_pred ccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCC-cEEEEecCeeeecCCCCCCCCC
Q psy7538 188 TYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGM-PCMILRPSIVVPIYKEPLPGWT 266 (543)
Q Consensus 188 ~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~l-p~~IlRps~V~G~~~~p~~gw~ 266 (543)
++.|+.+|+.+|.+++.. ++ +++++||+.|+|+...+
T Consensus 140 ----------------------------------~~~Y~~sK~~~e~~~~~~---~~~~~~~vrpg~v~~~~~~~----- 177 (242)
T 2bka_A 140 ----------------------------------NFLYLQVKGEVEAKVEEL---KFDRYSVFRPGVLLCDRQES----- 177 (242)
T ss_dssp ----------------------------------SSHHHHHHHHHHHHHHTT---CCSEEEEEECCEEECTTGGG-----
T ss_pred ----------------------------------cchHHHHHHHHHHHHHhc---CCCCeEEEcCceecCCCCCC-----
Confidence 178999999999998776 67 59999999999986432
Q ss_pred CCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeec
Q psy7538 267 DNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTS 330 (543)
Q Consensus 267 d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s 330 (543)
.....+......... . ......+++++|+|++++.++.+... .+.|++.+
T Consensus 178 ---~~~~~~~~~~~~~~~-~----~~~~~~~~~~~dva~~~~~~~~~~~~------~~~~~~~~ 227 (242)
T 2bka_A 178 ---RPGEWLVRKFFGSLP-D----SWASGHSVPVVTVVRAMLNNVVRPRD------KQMELLEN 227 (242)
T ss_dssp ---SHHHHHHHHHHCSCC-T----TGGGGTEEEHHHHHHHHHHHHTSCCC------SSEEEEEH
T ss_pred ---cHHHHHHHHhhcccC-c----cccCCcccCHHHHHHHHHHHHhCccc------cCeeEeeH
Confidence 001112222222111 0 11123589999999999999876554 45676654
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=7.3e-24 Score=200.21 Aligned_cols=203 Identities=13% Similarity=0.111 Sum_probs=152.0
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
++|+|+|||||||||++++++|++.|+ +|+++.|++.... .....++.++.+|++
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~l~~~g~---~V~~~~r~~~~~~----------------------~~~~~~~~~~~~D~~ 56 (206)
T 1hdo_A 2 AVKKIAIFGATGQTGLTTLAQAVQAGY---EVTVLVRDSSRLP----------------------SEGPRPAHVVVGDVL 56 (206)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCGGGSC----------------------SSSCCCSEEEESCTT
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC---eEEEEEeChhhcc----------------------cccCCceEEEEecCC
Confidence 358999999999999999999999986 8999999753211 111357889999999
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCcccccc
Q psy7538 109 QLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERT 188 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i~E~~ 188 (543)
+++ ++..+++++|+|||+|+....... .++|+.++.+++++|++. ++++||++||..+++.....
T Consensus 57 ~~~------~~~~~~~~~d~vi~~a~~~~~~~~----~~~n~~~~~~~~~~~~~~-~~~~~v~~Ss~~~~~~~~~~---- 121 (206)
T 1hdo_A 57 QAA------DVDKTVAGQDAVIVLLGTRNDLSP----TTVMSEGARNIVAAMKAH-GVDKVVACTSAFLLWDPTKV---- 121 (206)
T ss_dssp SHH------HHHHHHTTCSEEEECCCCTTCCSC----CCHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCTTCS----
T ss_pred CHH------HHHHHHcCCCEEEECccCCCCCCc----cchHHHHHHHHHHHHHHh-CCCeEEEEeeeeeccCcccc----
Confidence 865 789999999999999997654222 248999999999999997 78999999999766532210
Q ss_pred cCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCCCCCCC
Q psy7538 189 YLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPGWTDN 268 (543)
Q Consensus 189 y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~gw~d~ 268 (543)
|. + .+.|+.+|..+|+++++. +++++++||+.++ +.. ..+.
T Consensus 122 ---~~-~--------------------------~~~y~~~K~~~e~~~~~~---~i~~~~lrp~~~~-~~~--~~~~--- 162 (206)
T 1hdo_A 122 ---PP-R--------------------------LQAVTDDHIRMHKVLRES---GLKYVAVMPPHIG-DQP--LTGA--- 162 (206)
T ss_dssp ---CG-G--------------------------GHHHHHHHHHHHHHHHHT---CSEEEEECCSEEE-CCC--CCSC---
T ss_pred ---cc-c--------------------------chhHHHHHHHHHHHHHhC---CCCEEEEeCCccc-CCC--CCcc---
Confidence 00 0 178999999999998653 8999999999983 321 1111
Q ss_pred CCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecC
Q psy7538 269 INGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSN 331 (543)
Q Consensus 269 ~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~ 331 (543)
+ ...+.+.+. .++++++|+|++++.++.++.. .+++||++++
T Consensus 163 -~-------------~~~~~~~~~--~~~i~~~Dva~~~~~~~~~~~~-----~g~~~~i~~g 204 (206)
T 1hdo_A 163 -Y-------------TVTLDGRGP--SRVISKHDLGHFMLRCLTTDEY-----DGHSTYPSHQ 204 (206)
T ss_dssp -C-------------EEESSSCSS--CSEEEHHHHHHHHHHTTSCSTT-----TTCEEEEECC
T ss_pred -e-------------EecccCCCC--CCccCHHHHHHHHHHHhcCccc-----cccceeeecc
Confidence 0 000001111 5899999999999999877543 4789999986
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=2.9e-24 Score=216.80 Aligned_cols=240 Identities=13% Similarity=0.171 Sum_probs=170.3
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+|+|+|||||||+|++++++|++.|+ +|++++|+..+..+ ++.+.+ ..+ ...+++++.+|+++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~R~~~~~~~-~~~~~~------~~~-------~~~~~~~~~~D~~d 66 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGH---PTYVLFRPEVVSNI-DKVQML------LYF-------KQLGAKLIEASLDD 66 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTC---CEEEECCSCCSSCH-HHHHHH------HHH-------HTTTCEEECCCSSC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCC---cEEEEECCCcccch-hHHHHH------HHH-------HhCCeEEEeCCCCC
Confidence 57899999999999999999999986 78999998654322 121111 000 11468899999998
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCccccccc
Q psy7538 110 LKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTY 189 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i~E~~y 189 (543)
++ ++..+++++|+|||+|+..... .|+.++.+++++|++.+++++||+ |.|+..... . +
T Consensus 67 ~~------~l~~~~~~~d~vi~~a~~~~~~--------~~~~~~~~l~~aa~~~g~v~~~v~--S~~g~~~~~-~-~--- 125 (313)
T 1qyd_A 67 HQ------RLVDALKQVDVVISALAGGVLS--------HHILEQLKLVEAIKEAGNIKRFLP--SEFGMDPDI-M-E--- 125 (313)
T ss_dssp HH------HHHHHHTTCSEEEECCCCSSSS--------TTTTTHHHHHHHHHHSCCCSEEEC--SCCSSCTTS-C-C---
T ss_pred HH------HHHHHHhCCCEEEECCccccch--------hhHHHHHHHHHHHHhcCCCceEEe--cCCcCCccc-c-c---
Confidence 75 8999999999999999976532 278889999999999833999985 444422111 0 0
Q ss_pred CCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCCCCCCCC
Q psy7538 190 LPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPGWTDNI 269 (543)
Q Consensus 190 ~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~gw~d~~ 269 (543)
.+..| ..+.| .+|..+|+++++. +++++++||+.++|.....+....
T Consensus 126 -~~~~p-------------------------~~~~y-~sK~~~e~~~~~~---g~~~~ilrp~~~~~~~~~~~~~~~--- 172 (313)
T 1qyd_A 126 -HALQP-------------------------GSITF-IDKRKVRRAIEAA---SIPYTYVSSNMFAGYFAGSLAQLD--- 172 (313)
T ss_dssp -CCCSS-------------------------TTHHH-HHHHHHHHHHHHT---TCCBCEEECCEEHHHHTTTSSCTT---
T ss_pred -cCCCC-------------------------CcchH-HHHHHHHHHHHhc---CCCeEEEEeceecccccccccccc---
Confidence 01100 01578 9999999999764 899999999999886432111100
Q ss_pred CchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeec-CCCCcccHHHHHHHHhhh
Q psy7538 270 NGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTS-NKDYKITWQEICDIGKDI 348 (543)
Q Consensus 270 ~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s-~~~~~~t~~e~~~~i~~~ 348 (543)
+ .....+....++++++...++++++|+|++++.++.++.. .+++|++++ + +++|+.|+++.+.+.
T Consensus 173 -~-----~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~-----~~~~~~~~g~~--~~~s~~e~~~~~~~~ 239 (313)
T 1qyd_A 173 -G-----HMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQT-----LNKTMYIRPPM--NILSQKEVIQIWERL 239 (313)
T ss_dssp -C-----CSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGG-----SSSEEECCCGG--GEEEHHHHHHHHHHH
T ss_pred -c-----cccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCccc-----CCceEEEeCCC--CccCHHHHHHHHHHh
Confidence 0 0001222334567888999999999999999999877643 356777764 4 689999999999999
Q ss_pred hcCcc
Q psy7538 349 VTSKI 353 (543)
Q Consensus 349 ~G~~~ 353 (543)
+|.+.
T Consensus 240 ~g~~~ 244 (313)
T 1qyd_A 240 SEQNL 244 (313)
T ss_dssp HTCCC
T ss_pred cCCCC
Confidence 96543
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.8e-24 Score=217.19 Aligned_cols=230 Identities=13% Similarity=0.080 Sum_probs=171.4
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhC-CCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLE-PNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g-~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
+|+|+|||||||+|++++++|++.| + +|++++|+..... .+.+. ..+++++.+|++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~---~V~~~~R~~~~~~-~~~l~-------------------~~~~~~~~~D~~ 61 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTF---KVRVVTRNPRKKA-AKELR-------------------LQGAEVVQGDQD 61 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSS---EEEEEESCTTSHH-HHHHH-------------------HTTCEEEECCTT
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCc---eEEEEEcCCCCHH-HHHHH-------------------HCCCEEEEecCC
Confidence 5899999999999999999999997 5 8999999864311 11110 136789999999
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCcccccc
Q psy7538 109 QLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERT 188 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i~E~~ 188 (543)
+++ ++..+++++|+|||+|+.... ...+.|+.++.+++++|++. ++++||++||..++... +.
T Consensus 62 d~~------~l~~~~~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~~~aa~~~-gv~~iv~~S~~~~~~~~----~~- 124 (299)
T 2wm3_A 62 DQV------IMELALNGAYATFIVTNYWES-----CSQEQEVKQGKLLADLARRL-GLHYVVYSGLENIKKLT----AG- 124 (299)
T ss_dssp CHH------HHHHHHTTCSEEEECCCHHHH-----TCHHHHHHHHHHHHHHHHHH-TCSEEEECCCCCHHHHT----TT-
T ss_pred CHH------HHHHHHhcCCEEEEeCCCCcc-----ccchHHHHHHHHHHHHHHHc-CCCEEEEEcCccccccC----CC-
Confidence 875 899999999999999975311 12457889999999999997 89999998876543211 10
Q ss_pred cCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCCCCCCC
Q psy7538 189 YLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPGWTDN 268 (543)
Q Consensus 189 y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~gw~d~ 268 (543)
..++.|+.+|..+|+++++. +++++++||+.++|+... .|...
T Consensus 125 -------------------------------~~~~~y~~sK~~~e~~~~~~---gi~~~ilrp~~~~~~~~~---~~~~~ 167 (299)
T 2wm3_A 125 -------------------------------RLAAAHFDGKGEVEEYFRDI---GVPMTSVRLPCYFENLLS---HFLPQ 167 (299)
T ss_dssp -------------------------------SCCCHHHHHHHHHHHHHHHH---TCCEEEEECCEEGGGGGT---TTCCE
T ss_pred -------------------------------cccCchhhHHHHHHHHHHHC---CCCEEEEeecHHhhhchh---hcCCc
Confidence 12378999999999999875 899999999999997432 11110
Q ss_pred CCchHHHHHHHhcCce-eEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHHHHHhh
Q psy7538 269 INGPTGLLIGAGKGVI-RSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEICDIGKD 347 (543)
Q Consensus 269 ~~g~~~~~~~~~~g~~-~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~~~i~~ 347 (543)
....|.. ......++...++|+++|+|++++.++..+.. ..+++||+++ +++|+.|+++.+.+
T Consensus 168 ---------~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~----~~g~~~~~~g---~~~s~~e~~~~~~~ 231 (299)
T 2wm3_A 168 ---------KAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEK----YVGQNIGLST---CRHTAEEYAALLTK 231 (299)
T ss_dssp ---------ECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHH----HTTCEEECCS---EEECHHHHHHHHHH
T ss_pred ---------ccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhh----hCCeEEEeee---ccCCHHHHHHHHHH
Confidence 0112321 11123477889999999999999998876431 1367999975 46999999999999
Q ss_pred hhcCc
Q psy7538 348 IVTSK 352 (543)
Q Consensus 348 ~~G~~ 352 (543)
.+|.+
T Consensus 232 ~~g~~ 236 (299)
T 2wm3_A 232 HTRKV 236 (299)
T ss_dssp HHSSC
T ss_pred HHCCC
Confidence 99654
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.9e-24 Score=221.13 Aligned_cols=233 Identities=14% Similarity=0.141 Sum_probs=170.2
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc-C
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD-I 107 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD-l 107 (543)
++|+|+|||||||||++|+++|++.|+ +|++++|+..... .+.+ . ...+++++.+| +
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~R~~~~~~-~~~l-----------------~-~~~~v~~v~~D~l 61 (352)
T 1xgk_A 4 QKKTIAVVGATGRQGASLIRVAAAVGH---HVRAQVHSLKGLI-AEEL-----------------Q-AIPNVTLFQGPLL 61 (352)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTC---CEEEEESCSCSHH-HHHH-----------------H-TSTTEEEEESCCT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCC---EEEEEECCCChhh-HHHH-----------------h-hcCCcEEEECCcc
Confidence 468999999999999999999999986 7889999764310 0111 1 11368899999 9
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccC-CceEEEEecCccccCCCcccc
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKN-LKCFTYISTAYCHPSEKVLEE 186 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-l~~~V~vST~y~~~~~~~i~E 186 (543)
++++ ++..+++++|+|||+|+.... ..|+.+ ++++++|++. + +++|||+||.++..
T Consensus 62 ~d~~------~l~~~~~~~d~Vi~~a~~~~~--------~~~~~~-~~l~~aa~~~-g~v~~~V~~SS~~~~~------- 118 (352)
T 1xgk_A 62 NNVP------LMDTLFEGAHLAFINTTSQAG--------DEIAIG-KDLADAAKRA-GTIQHYIYSSMPDHSL------- 118 (352)
T ss_dssp TCHH------HHHHHHTTCSEEEECCCSTTS--------CHHHHH-HHHHHHHHHH-SCCSEEEEEECCCGGG-------
T ss_pred CCHH------HHHHHHhcCCEEEEcCCCCCc--------HHHHHH-HHHHHHHHHc-CCccEEEEeCCccccc-------
Confidence 8875 789999999999999976421 247777 9999999998 6 99999999986311
Q ss_pred cccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCCCCC
Q psy7538 187 RTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPGWT 266 (543)
Q Consensus 187 ~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~gw~ 266 (543)
|.. ..++.|+.||+.+|+++++. +++++|+||+ +||+......
T Consensus 119 --~~~----------------------------~~~~~y~~sK~~~E~~~~~~---gi~~~ivrpg-~~g~~~~~~~--- 161 (352)
T 1xgk_A 119 --YGP----------------------------WPAVPMWAPKFTVENYVRQL---GLPSTFVYAG-IYNNNFTSLP--- 161 (352)
T ss_dssp --TSS----------------------------CCCCTTTHHHHHHHHHHHTS---SSCEEEEEEC-EEGGGCBSSS---
T ss_pred --cCC----------------------------CCCccHHHHHHHHHHHHHHc---CCCEEEEecc-eecCCchhcc---
Confidence 000 11278999999999999875 8999999987 6777542110
Q ss_pred CCCCchHHHHHHHhcCcee-EEeecCCcccccchH-HHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHHHH
Q psy7538 267 DNINGPTGLLIGAGKGVIR-SMYCKNTGMADFLPA-DVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEICDI 344 (543)
Q Consensus 267 d~~~g~~~~~~~~~~g~~~-~~~~~~~~~~d~V~v-ddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~~~ 344 (543)
..+... .....|... .+++++++..++|++ +|+|++++.++.+... . ..+++||+++ .++|+.|+++.
T Consensus 162 ~~~~~~----~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~-~--~~g~~~~l~~---~~~s~~e~~~~ 231 (352)
T 1xgk_A 162 YPLFQM----ELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQ-K--WNGHRIALTF---ETLSPVQVCAA 231 (352)
T ss_dssp CSSCBE----EECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHH-H--HTTCEEEECS---EEECHHHHHHH
T ss_pred cccccc----cccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCch-h--hCCeEEEEec---CCCCHHHHHHH
Confidence 000000 001234432 346678899999999 9999999999876421 0 1378999995 56999999999
Q ss_pred HhhhhcCcc
Q psy7538 345 GKDIVTSKI 353 (543)
Q Consensus 345 i~~~~G~~~ 353 (543)
+.+.+|.+.
T Consensus 232 i~~~~G~~~ 240 (352)
T 1xgk_A 232 FSRALNRRV 240 (352)
T ss_dssp HHHHHTSCE
T ss_pred HHHHHCCCC
Confidence 999996653
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.7e-22 Score=203.35 Aligned_cols=235 Identities=13% Similarity=0.163 Sum_probs=166.0
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC-CCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK-KGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~-~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++|+|+|||||||+|++++++|++.|+ +|++++|+. ....+.++.+.+ ..+. ..+++++.+|+
T Consensus 1 ~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~R~~~~~~~~~~~~~~~------~~l~-------~~~v~~v~~D~ 64 (307)
T 2gas_A 1 TENKILILGPTGAIGRHIVWASIKAGN---PTYALVRKTITAANPETKEELI------DNYQ-------SLGVILLEGDI 64 (307)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHHTC---CEEEEECCSCCSSCHHHHHHHH------HHHH-------HTTCEEEECCT
T ss_pred CCcEEEEECCCchHHHHHHHHHHhCCC---cEEEEECCCcccCChHHHHHHH------HHHH-------hCCCEEEEeCC
Confidence 367899999999999999999999986 788999986 322221222211 0010 13688999999
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCccccc
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEER 187 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i~E~ 187 (543)
++++ ++..+++++|+|||+|+... +.++.+++++|++.+++++||+ |.|+... +|.
T Consensus 65 ~d~~------~l~~~~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~--S~~g~~~----~~~ 120 (307)
T 2gas_A 65 NDHE------TLVKAIKQVDIVICAAGRLL------------IEDQVKIIKAIKEAGNVKKFFP--SEFGLDV----DRH 120 (307)
T ss_dssp TCHH------HHHHHHTTCSEEEECSSSSC------------GGGHHHHHHHHHHHCCCSEEEC--SCCSSCT----TSC
T ss_pred CCHH------HHHHHHhCCCEEEECCcccc------------cccHHHHHHHHHhcCCceEEee--cccccCc----ccc
Confidence 9875 79999999999999999754 4567899999999833999983 4444211 111
Q ss_pred ccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCCCCCC
Q psy7538 188 TYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPGWTD 267 (543)
Q Consensus 188 ~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~gw~d 267 (543)
. +..|. .+.| .+|..+|+.+++. +++++++||+.+++.... .+..
T Consensus 121 ~---~~~p~-------------------------~~~y-~sK~~~e~~~~~~---~i~~~~lrp~~~~~~~~~---~~~~ 165 (307)
T 2gas_A 121 D---AVEPV-------------------------RQVF-EEKASIRRVIEAE---GVPYTYLCCHAFTGYFLR---NLAQ 165 (307)
T ss_dssp C---CCTTH-------------------------HHHH-HHHHHHHHHHHHH---TCCBEEEECCEETTTTGG---GTTC
T ss_pred c---CCCcc-------------------------hhHH-HHHHHHHHHHHHc---CCCeEEEEcceeeccccc---cccc
Confidence 1 11110 0578 9999999998765 899999999998875321 1110
Q ss_pred CCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeec-CCCCcccHHHHHHHHh
Q psy7538 268 NINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTS-NKDYKITWQEICDIGK 346 (543)
Q Consensus 268 ~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s-~~~~~~t~~e~~~~i~ 346 (543)
.. .....+....++++++...++++++|+|++++.++..+.. .+++|++++ + +.+|+.|+++.+.
T Consensus 166 ~~-------~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~-----~~~~~~~~~~~--~~~s~~e~~~~~~ 231 (307)
T 2gas_A 166 LD-------ATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNT-----LNKAVHIRLPK--NYLTQNEVIALWE 231 (307)
T ss_dssp TT-------CSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGGG-----TTEEEECCCGG--GEEEHHHHHHHHH
T ss_pred cc-------cccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCccc-----cCceEEEeCCC--CcCCHHHHHHHHH
Confidence 00 0011222334567888999999999999999999876543 356777654 4 6899999999999
Q ss_pred hhhcCc
Q psy7538 347 DIVTSK 352 (543)
Q Consensus 347 ~~~G~~ 352 (543)
+..|.+
T Consensus 232 ~~~g~~ 237 (307)
T 2gas_A 232 KKIGKT 237 (307)
T ss_dssp HHHTSC
T ss_pred HHhCCC
Confidence 999654
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=6.2e-23 Score=206.59 Aligned_cols=234 Identities=14% Similarity=0.225 Sum_probs=166.8
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+|+|+|||||||+|+++++.|++.|+ +|++++|+.......++.+.+ ..+ ...+++++.+|+++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~---~V~~l~R~~~~~~~~~~~~~~------~~l-------~~~~v~~v~~D~~d 67 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGH---PTFLLVRESTASSNSEKAQLL------ESF-------KASGANIVHGSIDD 67 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTC---CEEEECCCCCTTTTHHHHHHH------HHH-------HTTTCEEECCCTTC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCC---CEEEEECCcccccCHHHHHHH------HHH-------HhCCCEEEEeccCC
Confidence 57899999999999999999999986 788999986543111222111 001 12468899999998
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCccccccc
Q psy7538 110 LKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTY 189 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i~E~~y 189 (543)
++ ++..+++++|+|||+|+... +.++.+++++|++.+++++||+ | .|+... +|.
T Consensus 68 ~~------~l~~~~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~-S-~~g~~~----~~~-- 121 (308)
T 1qyc_A 68 HA------SLVEAVKNVDVVISTVGSLQ------------IESQVNIIKAIKEVGTVKRFFP-S-EFGNDV----DNV-- 121 (308)
T ss_dssp HH------HHHHHHHTCSEEEECCCGGG------------SGGGHHHHHHHHHHCCCSEEEC-S-CCSSCT----TSC--
T ss_pred HH------HHHHHHcCCCEEEECCcchh------------hhhHHHHHHHHHhcCCCceEee-c-ccccCc----ccc--
Confidence 75 79999999999999998643 4567899999999833999984 4 443211 111
Q ss_pred CCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCCCCCCCC
Q psy7538 190 LPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPGWTDNI 269 (543)
Q Consensus 190 ~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~gw~d~~ 269 (543)
.+..|. .+.| .+|..+|+.+++. +++++++||+.++|........+
T Consensus 122 -~~~~p~-------------------------~~~y-~sK~~~e~~~~~~---~~~~~~~r~~~~~~~~~~~~~~~---- 167 (308)
T 1qyc_A 122 -HAVEPA-------------------------KSVF-EVKAKVRRAIEAE---GIPYTYVSSNCFAGYFLRSLAQA---- 167 (308)
T ss_dssp -CCCTTH-------------------------HHHH-HHHHHHHHHHHHH---TCCBEEEECCEEHHHHTTTTTCT----
T ss_pred -ccCCcc-------------------------hhHH-HHHHHHHHHHHhc---CCCeEEEEeceeccccccccccc----
Confidence 111110 0578 9999999999765 89999999999988643211100
Q ss_pred CchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeec-CCCCcccHHHHHHHHhhh
Q psy7538 270 NGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTS-NKDYKITWQEICDIGKDI 348 (543)
Q Consensus 270 ~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s-~~~~~~t~~e~~~~i~~~ 348 (543)
+ .....+....++++++...++++++|+|++++.++.++.. .+++|++++ + +++|+.|+++.+.+.
T Consensus 168 -~-----~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~-----~~~~~~~~g~~--~~~s~~e~~~~~~~~ 234 (308)
T 1qyc_A 168 -G-----LTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRT-----LNKTLYLRLPA--NTLSLNELVALWEKK 234 (308)
T ss_dssp -T-----CSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGG-----TTEEEECCCGG--GEEEHHHHHHHHHHH
T ss_pred -c-----ccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCccc-----cCeEEEEeCCC--CccCHHHHHHHHHHH
Confidence 0 0011233345678889999999999999999988876543 366777764 4 689999999999999
Q ss_pred hcCc
Q psy7538 349 VTSK 352 (543)
Q Consensus 349 ~G~~ 352 (543)
+|.+
T Consensus 235 ~g~~ 238 (308)
T 1qyc_A 235 IDKT 238 (308)
T ss_dssp TTSC
T ss_pred hCCC
Confidence 9654
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.2e-23 Score=210.17 Aligned_cols=230 Identities=13% Similarity=0.182 Sum_probs=165.9
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC-CCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK-KGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~-~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
.+|+|+|||||||+|++++++|++.|+ +|++++|+. .+..+ ++.+.+ ..+ ...+++++.+|+
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~R~~~~~~~~-~~~~~l------~~~-------~~~~v~~v~~D~ 65 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSFSH---PTFIYARPLTPDSTP-SSVQLR------EEF-------RSMGVTIIEGEM 65 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHTTC---CEEEEECCCCTTCCH-HHHHHH------HHH-------HHTTCEEEECCT
T ss_pred cccEEEEEcCCchhHHHHHHHHHhCCC---cEEEEECCcccccCh-HHHHHH------HHh-------hcCCcEEEEecC
Confidence 467899999999999999999999986 789999986 33221 121111 001 013688999999
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccC-CceEEEEecCccccCCCcccc
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKN-LKCFTYISTAYCHPSEKVLEE 186 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-l~~~V~vST~y~~~~~~~i~E 186 (543)
++++ ++..+++++|+|||+|+... +.++.+++++|++. + +++|| +|.|+... +|
T Consensus 66 ~d~~------~l~~a~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~-g~v~~~v--~S~~g~~~----~~ 120 (321)
T 3c1o_A 66 EEHE------KMVSVLKQVDIVISALPFPM------------ISSQIHIINAIKAA-GNIKRFL--PSDFGCEE----DR 120 (321)
T ss_dssp TCHH------HHHHHHTTCSEEEECCCGGG------------SGGGHHHHHHHHHH-CCCCEEE--CSCCSSCG----GG
T ss_pred CCHH------HHHHHHcCCCEEEECCCccc------------hhhHHHHHHHHHHh-CCccEEe--ccccccCc----cc
Confidence 9875 89999999999999998643 56678999999998 6 99998 34443211 12
Q ss_pred cccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCCCCC
Q psy7538 187 RTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPGWT 266 (543)
Q Consensus 187 ~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~gw~ 266 (543)
. .+..|. .+.| .+|..+|+++++. +++++++||+.+++....
T Consensus 121 ~---~~~~p~-------------------------~~~y-~sK~~~e~~~~~~---~~~~~~lrp~~~~~~~~~------ 162 (321)
T 3c1o_A 121 I---KPLPPF-------------------------ESVL-EKKRIIRRAIEAA---ALPYTYVSANCFGAYFVN------ 162 (321)
T ss_dssp C---CCCHHH-------------------------HHHH-HHHHHHHHHHHHH---TCCBEEEECCEEHHHHHH------
T ss_pred c---ccCCCc-------------------------chHH-HHHHHHHHHHHHc---CCCeEEEEeceecccccc------
Confidence 1 111110 0579 9999999999765 899999999988775210
Q ss_pred CCCCchHHHHH---HHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeec-CCCCcccHHHHH
Q psy7538 267 DNINGPTGLLI---GAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTS-NKDYKITWQEIC 342 (543)
Q Consensus 267 d~~~g~~~~~~---~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s-~~~~~~t~~e~~ 342 (543)
.+.. ....+....++++++...++++++|+|++++.++..+.. .+++|++++ + +++|+.|++
T Consensus 163 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~-----~g~~~~~~g~~--~~~t~~e~~ 228 (321)
T 3c1o_A 163 -------YLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRC-----CNRIVIYRPPK--NIISQNELI 228 (321)
T ss_dssp -------HHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGGG-----TTEEEECCCGG--GEEEHHHHH
T ss_pred -------ccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCccc-----cCeEEEEeCCC--CcccHHHHH
Confidence 1111 011233344677888999999999999999999877653 367777764 4 689999999
Q ss_pred HHHhhhhcCc
Q psy7538 343 DIGKDIVTSK 352 (543)
Q Consensus 343 ~~i~~~~G~~ 352 (543)
+.+.+.+|.+
T Consensus 229 ~~~~~~~g~~ 238 (321)
T 3c1o_A 229 SLWEAKSGLS 238 (321)
T ss_dssp HHHHHHHTSC
T ss_pred HHHHHHcCCc
Confidence 9999999654
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.3e-22 Score=205.45 Aligned_cols=225 Identities=17% Similarity=0.177 Sum_probs=163.8
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
++|+|||||||+|++++++|++.|+ +|++++|+.... .+.++++ ...+++++.+|++++
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~---~V~~l~R~~~~~--~~~~~~l----------------~~~~v~~v~~Dl~d~ 70 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGH---PTYVFTRPNSSK--TTLLDEF----------------QSLGAIIVKGELDEH 70 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTC---CEEEEECTTCSC--HHHHHHH----------------HHTTCEEEECCTTCH
T ss_pred CeEEEECCCchHHHHHHHHHHHCCC---cEEEEECCCCch--hhHHHHh----------------hcCCCEEEEecCCCH
Confidence 5899999999999999999999986 788999986421 2222211 013688999999987
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCcccccccC
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYL 190 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i~E~~y~ 190 (543)
+ ++..+++++|+|||+|+... +.++.+++++|++.+++++||+ | .|+... +|.
T Consensus 71 ~------~l~~a~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~-S-~~g~~~----~~~--- 123 (318)
T 2r6j_A 71 E------KLVELMKKVDVVISALAFPQ------------ILDQFKILEAIKVAGNIKRFLP-S-DFGVEE----DRI--- 123 (318)
T ss_dssp H------HHHHHHTTCSEEEECCCGGG------------STTHHHHHHHHHHHCCCCEEEC-S-CCSSCT----TTC---
T ss_pred H------HHHHHHcCCCEEEECCchhh------------hHHHHHHHHHHHhcCCCCEEEe-e-ccccCc----ccc---
Confidence 5 89999999999999998642 4567899999999833999985 3 343211 111
Q ss_pred CCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCCCCCCCCC
Q psy7538 191 PPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPGWTDNIN 270 (543)
Q Consensus 191 ~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~gw~d~~~ 270 (543)
.+..|. .+.| .+|..+|+++++. +++++++||+.+++...
T Consensus 124 ~~~~p~-------------------------~~~y-~sK~~~e~~~~~~---~~~~~~lr~~~~~~~~~----------- 163 (318)
T 2r6j_A 124 NALPPF-------------------------EALI-ERKRMIRRAIEEA---NIPYTYVSANCFASYFI----------- 163 (318)
T ss_dssp CCCHHH-------------------------HHHH-HHHHHHHHHHHHT---TCCBEEEECCEEHHHHH-----------
T ss_pred cCCCCc-------------------------chhH-HHHHHHHHHHHhc---CCCeEEEEcceehhhhh-----------
Confidence 111110 0468 9999999998764 89999999998765311
Q ss_pred chHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEee-cCCCCcccHHHHHHHHhhhh
Q psy7538 271 GPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLT-SNKDYKITWQEICDIGKDIV 349 (543)
Q Consensus 271 g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~-s~~~~~~t~~e~~~~i~~~~ 349 (543)
..++.....+....++++++...++++++|++++++.++..+.. .+++|+++ ++ +.+|+.|+++.+.+.+
T Consensus 164 --~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~-----~~~~~~~~g~~--~~~s~~e~~~~~~~~~ 234 (318)
T 2r6j_A 164 --NYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRA-----LNRVVIYRPST--NIITQLELISRWEKKI 234 (318)
T ss_dssp --HHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGG-----TTEEEECCCGG--GEEEHHHHHHHHHHHH
T ss_pred --hhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCccc-----cCeEEEecCCC--CccCHHHHHHHHHHHh
Confidence 01111112333445677888999999999999999999876543 35677765 44 6899999999999999
Q ss_pred cCc
Q psy7538 350 TSK 352 (543)
Q Consensus 350 G~~ 352 (543)
|.+
T Consensus 235 g~~ 237 (318)
T 2r6j_A 235 GKK 237 (318)
T ss_dssp TCC
T ss_pred CCC
Confidence 654
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.4e-22 Score=198.04 Aligned_cols=240 Identities=12% Similarity=0.041 Sum_probs=158.7
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|+|||||||||++++++|++.|+ +|+++.|+.... . . .+.+|++++
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~---~V~~~~r~~~~~-----------------------~---~---~~~~D~~~~ 49 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGH---TVIGIDRGQADI-----------------------E---A---DLSTPGGRE 49 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSSSSE-----------------------E---C---CTTSHHHHH
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCC---EEEEEeCChhHc-----------------------c---c---cccCCcccH
Confidence 6899999999999999999999986 899999975321 1 0 156788765
Q ss_pred CCCCCHHHHHHHhc----CccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhc---cCCceEEEEecCccccCCCc
Q psy7538 111 KLGISEIDKKELID----NVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQM---KNLKCFTYISTAYCHPSEKV 183 (543)
Q Consensus 111 ~lgls~~~~~~l~~----~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~vST~y~~~~~~~ 183 (543)
+ +++.+++ ++|+|||+||......+++..+++|+.|+.+++++|.+. .+.+++|++||..++.....
T Consensus 50 ~------~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~ 123 (255)
T 2dkn_A 50 T------AVAAVLDRCGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAA 123 (255)
T ss_dssp H------HHHHHHHHHTTCCSEEEECCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGG
T ss_pred H------HHHHHHHHcCCCccEEEECCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecccccccccc
Confidence 4 6777765 899999999987645668889999999999999988763 24689999999977643211
Q ss_pred ccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEEEecCeeeecCC
Q psy7538 184 LEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMILRPSIVVPIYK 259 (543)
Q Consensus 184 i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~IlRps~V~G~~~ 259 (543)
. . + ..+.....+++......... ....+.|+.||+.+|.+++.++. .+++++++||+.|+|+..
T Consensus 124 ~------~---~--~~~~~~~~~~~~~~~~~~~~-~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~ 191 (255)
T 2dkn_A 124 E------L---P--MVEAMLAGDEARAIELAEQQ-GQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLL 191 (255)
T ss_dssp G------C---H--HHHHHHHTCHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHH
T ss_pred c------c---c--hhhhhcccchhhhhhhcccc-CCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhh
Confidence 0 0 0 00000111111111000000 01116899999999999987654 489999999999988632
Q ss_pred CCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHH
Q psy7538 260 EPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQ 339 (543)
Q Consensus 260 ~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~ 339 (543)
.. .+.....+....... + ...++++++|+|++++.++..... ...+++||++++ .+++++
T Consensus 192 ~~-------------~~~~~~~~~~~~~~~-~-~~~~~~~~~dva~~~~~l~~~~~~---~~~G~~~~v~gg--~~~~~~ 251 (255)
T 2dkn_A 192 QA-------------SKADPRYGESTRRFV-A-PLGRGSEPREVAEAIAFLLGPQAS---FIHGSVLFVDGG--MDALMR 251 (255)
T ss_dssp HH-------------HHHCTTTHHHHHSCC-C-TTSSCBCHHHHHHHHHHHHSGGGT---TCCSCEEEESTT--HHHHHC
T ss_pred hh-------------cccchhhHHHHHHHH-H-HhcCCCCHHHHHHHHHHHhCCCcc---cceeeEEEecCC--eEeeee
Confidence 11 100000000000000 2 445799999999999998876532 124789999988 666654
Q ss_pred H
Q psy7538 340 E 340 (543)
Q Consensus 340 e 340 (543)
|
T Consensus 252 e 252 (255)
T 2dkn_A 252 A 252 (255)
T ss_dssp T
T ss_pred c
Confidence 4
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=3.8e-21 Score=190.75 Aligned_cols=241 Identities=15% Similarity=0.187 Sum_probs=172.9
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||+|+||++++++|++.|+ +|+++.|... +.+++. +.+ .. ..++.++.+|+
T Consensus 14 l~~k~vlITGasggiG~~~a~~l~~~G~---~V~~~~r~~~------~~~~~~-----~~~-----~~-~~~~~~~~~D~ 73 (278)
T 2bgk_A 14 LQDKVAIITGGAGGIGETTAKLFVRYGA---KVVIADIADD------HGQKVC-----NNI-----GS-PDVISFVHCDV 73 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCHH------HHHHHH-----HHH-----CC-TTTEEEEECCT
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEcCChh------HHHHHH-----HHh-----CC-CCceEEEECCC
Confidence 6789999999999999999999999986 7888888642 221111 111 11 12788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC---------cccHHHHHHHHHHHHHHHHHHHHhc---cCCce
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF---------DEPIKTAVILNTRGTRDMLELSKQM---KNLKC 168 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~---------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~ 168 (543)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... .+..+
T Consensus 74 ~~~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ 147 (278)
T 2bgk_A 74 TKDE------DVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGS 147 (278)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCe
Confidence 9875 6776665 79999999996532 1446678999999999999988763 25679
Q ss_pred EEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCC
Q psy7538 169 FTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGM 244 (543)
Q Consensus 169 ~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~l 244 (543)
+|++||..+..... . ....|+.||+..|.+++..+. .++
T Consensus 148 iv~isS~~~~~~~~--------~-----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi 190 (278)
T 2bgk_A 148 IVFTASISSFTAGE--------G-----------------------------VSHVYTATKHAVLGLTTSLCTELGEYGI 190 (278)
T ss_dssp EEEECCGGGTCCCT--------T-----------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred EEEEeeccccCCCC--------C-----------------------------CCcchHHHHHHHHHHHHHHHHHHhhcCc
Confidence 99999986654211 0 016899999999999887654 489
Q ss_pred cEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCc
Q psy7538 245 PCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKS 324 (543)
Q Consensus 245 p~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~ 324 (543)
+++++||+.|+++......+ ...........+ .+.....+++++|+|++++.++..... ...++
T Consensus 191 ~v~~v~Pg~v~t~~~~~~~~------~~~~~~~~~~~~-------~~~~~~~~~~~~dva~~~~~l~~~~~~---~~~G~ 254 (278)
T 2bgk_A 191 RVNCVSPYIVASPLLTDVFG------VDSSRVEELAHQ-------AANLKGTLLRAEDVADAVAYLAGDESK---YVSGL 254 (278)
T ss_dssp EEEEEEESCCSCCCCTTSSS------CCHHHHHHHHHH-------TCSSCSCCCCHHHHHHHHHHHHSGGGT---TCCSC
T ss_pred EEEEEEeceecchhhhhhcc------cchhHHHHhhhc-------ccccccccCCHHHHHHHHHHHcCcccc---cCCCC
Confidence 99999999999886432110 011122222111 112234689999999999988865432 12588
Q ss_pred EEEeecCCCCcccHHHHHHHHhhhh
Q psy7538 325 VCNLTSNKDYKITWQEICDIGKDIV 349 (543)
Q Consensus 325 vyni~s~~~~~~t~~e~~~~i~~~~ 349 (543)
+|++.++ ..+++.|+++.+.+.+
T Consensus 255 ~~~v~gg--~~~~~~e~~~~i~~~~ 277 (278)
T 2bgk_A 255 NLVIDGG--YTRTNPAFPTALKHGL 277 (278)
T ss_dssp EEEESTT--GGGCCTHHHHHSCSCC
T ss_pred EEEECCc--ccccCCccchhhhhhc
Confidence 9999998 8899999999887653
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.7e-21 Score=193.78 Aligned_cols=241 Identities=15% Similarity=0.101 Sum_probs=163.9
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
++|+|+||||+|+||++++++|++.|+ +|+++.|+... ++++ . .....++.++.+|++
T Consensus 4 ~~k~vlVTGas~gIG~~~a~~l~~~G~---~V~~~~r~~~~------~~~~---------~----~~~~~~~~~~~~Dv~ 61 (281)
T 3m1a_A 4 SAKVWLVTGASSGFGRAIAEAAVAAGD---TVIGTARRTEA------LDDL---------V----AAYPDRAEAISLDVT 61 (281)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSGGG------GHHH---------H----HHCTTTEEEEECCTT
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHHH------HHHH---------H----HhccCCceEEEeeCC
Confidence 679999999999999999999999986 88999997532 1111 1 112247889999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHH----HHHHHHHHHhccCCceEE
Q psy7538 109 QLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRG----TRDMLELSKQMKNLKCFT 170 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~g----t~~ll~~a~~~~~l~~~V 170 (543)
+++ +++.+++ ++|+|||+||.... .+.++..+++|+.| ++.++..+++. +..++|
T Consensus 62 ~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~~~iv 134 (281)
T 3m1a_A 62 DGE------RIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRER-GSGSVV 134 (281)
T ss_dssp CHH------HHHHHHHHHHHHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEE
T ss_pred CHH------HHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEE
Confidence 875 6666665 78999999996522 24456789999999 55555555665 678999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... + .+.|+.||+..|.+.+.++. +|+++
T Consensus 135 ~~sS~~~~~~~~---------~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v 176 (281)
T 3m1a_A 135 NISSFGGQLSFA---------G-----------------------------FSAYSATKAALEQLSEGLADEVAPFGIKV 176 (281)
T ss_dssp EECCGGGTCCCT---------T-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred EEcCccccCCCC---------C-----------------------------chHHHHHHHHHHHHHHHHHHHhhccCcEE
Confidence 999986643211 1 16899999999999887654 58999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
.++||+.|.++...+.......... .+......+.. .........+++++|+|++++.++..... +..|
T Consensus 177 ~~v~Pg~v~t~~~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~dva~a~~~~~~~~~~------~~~~ 245 (281)
T 3m1a_A 177 LIVEPGAFRTNLFGKGAAYFSEENP--AYAEKVGPTRQ---LVQGSDGSQPGDPAKAAAAIRLALDTEKT------PLRL 245 (281)
T ss_dssp EEEEECCBCCTTTCCCCEEECCBCT--TTHHHHHHHHH---HHHC-----CBCHHHHHHHHHHHHHSSSC------CSEE
T ss_pred EEEecCccccccccccccccCCcch--hhHHHhHHHHH---HHhhccCCCCCCHHHHHHHHHHHHhCCCC------CeEE
Confidence 9999999988764432211111000 01111100000 11122345677899999999999887654 6689
Q ss_pred EeecCCCCcccHHHHHHHHhhhh
Q psy7538 327 NLTSNKDYKITWQEICDIGKDIV 349 (543)
Q Consensus 327 ni~s~~~~~~t~~e~~~~i~~~~ 349 (543)
+++++ ......+....+.+.+
T Consensus 246 ~l~s~--~~~~i~g~~~~i~~~~ 266 (281)
T 3m1a_A 246 ALGGD--AVDFLTGHLDSVRAEL 266 (281)
T ss_dssp EESHH--HHHHHHHHHHHHHHHH
T ss_pred ecCch--HHHHHHHHHHHHHHHH
Confidence 99987 6666677666666655
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=4.6e-21 Score=187.56 Aligned_cols=226 Identities=13% Similarity=0.072 Sum_probs=161.0
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||||+||++++++|++.|+ +|+++.|+.. +++++ .+.++. ...++.++.+|+
T Consensus 9 ~~~~~vlVtGasggiG~~la~~l~~~G~---~V~~~~r~~~------~~~~~-----~~~~~~-----~~~~~~~~~~D~ 69 (255)
T 1fmc_A 9 LDGKCAIITGAGAGIGKEIAITFATAGA---SVVVSDINAD------AANHV-----VDEIQQ-----LGGQAFACRCDI 69 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTTTC---EEEEEESCHH------HHHHH-----HHHHHH-----TTCCEEEEECCT
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCC---EEEEEcCCHH------HHHHH-----HHHHHH-----hCCceEEEEcCC
Confidence 5789999999999999999999999986 7899998642 22221 111211 124688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFTY 171 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~ 171 (543)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... .+.+++|+
T Consensus 70 ~~~~------~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~ 143 (255)
T 1fmc_A 70 TSEQ------ELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILT 143 (255)
T ss_dssp TCHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 9875 6776665 79999999997543 2445678999999999999988531 25689999
Q ss_pred EecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEE
Q psy7538 172 ISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCM 247 (543)
Q Consensus 172 vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~ 247 (543)
+||..+..... + .+.|+.||+..|.+++.++. .++++.
T Consensus 144 ~sS~~~~~~~~---------~-----------------------------~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~ 185 (255)
T 1fmc_A 144 ITSMAAENKNI---------N-----------------------------MTSYASSKAAASHLVRNMAFDLGEKNIRVN 185 (255)
T ss_dssp ECCGGGTCCCT---------T-----------------------------CHHHHHHHHHHHHHHHHHHHHHHTTTEEEE
T ss_pred EcchhhcCCCC---------C-----------------------------CcccHHHHHHHHHHHHHHHHHhhhcCcEEE
Confidence 99986643211 1 16899999999999887664 489999
Q ss_pred EEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEE
Q psy7538 248 ILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCN 327 (543)
Q Consensus 248 IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyn 327 (543)
++||+.|+++.... ...+ .+......+. ....+++++|+|++++.++..... ...+++||
T Consensus 186 ~v~Pg~v~t~~~~~-------~~~~-~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~~~---~~~G~~~~ 245 (255)
T 1fmc_A 186 GIAPGAILTDALKS-------VITP-EIEQKMLQHT---------PIRRLGQPQDIANAALFLCSPAAS---WVSGQILT 245 (255)
T ss_dssp EEEECSBCSHHHHT-------TCCH-HHHHHHHHTC---------SSCSCBCHHHHHHHHHHHHSGGGT---TCCSCEEE
T ss_pred EEecccCcchhhhh-------ccCh-HHHHHHHhcC---------CcccCCCHHHHHHHHHHHhCCccc---cCCCcEEE
Confidence 99999998864321 0111 2222222221 223578999999999988865432 12478999
Q ss_pred eecCCCCcccH
Q psy7538 328 LTSNKDYKITW 338 (543)
Q Consensus 328 i~s~~~~~~t~ 338 (543)
++++ ..+|+
T Consensus 246 v~gg--~~~s~ 254 (255)
T 1fmc_A 246 VSGG--GVQEL 254 (255)
T ss_dssp ESTT--SCCCC
T ss_pred ECCc--eeccC
Confidence 9988 65554
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=2e-20 Score=181.93 Aligned_cols=218 Identities=12% Similarity=0.155 Sum_probs=156.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||+|+||++++++|++.|+ +|+++.|+. ++++++.+ + ..+++++.+|+
T Consensus 5 ~~~~~vlVTGasggiG~~~a~~l~~~G~---~V~~~~r~~------~~~~~~~~---------~-----~~~~~~~~~D~ 61 (244)
T 1cyd_A 5 FSGLRALVTGAGKGIGRDTVKALHASGA---KVVAVTRTN------SDLVSLAK---------E-----CPGIEPVCVDL 61 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHHH---------H-----STTCEEEECCT
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHHH---------h-----ccCCCcEEecC
Confidence 5789999999999999999999999987 789999864 22222211 0 12466779999
Q ss_pred CCCCCCCCHHHHHHHhc---CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cC-CceEEEEe
Q psy7538 108 TQLKLGISEIDKKELID---NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KN-LKCFTYIS 173 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~---~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~-l~~~V~vS 173 (543)
++++ +++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++++... .+ .++||++|
T Consensus 62 ~~~~------~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~s 135 (244)
T 1cyd_A 62 GDWD------ATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVS 135 (244)
T ss_dssp TCHH------HHHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEEC
T ss_pred CCHH------HHHHHHHHcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEc
Confidence 9875 7888776 48999999996542 2345678999999999999888653 13 57999999
Q ss_pred cCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEEE
Q psy7538 174 TAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMIL 249 (543)
Q Consensus 174 T~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~Il 249 (543)
|..+..... + ...|+.||+..|.+++.++. .++++.++
T Consensus 136 S~~~~~~~~---------~-----------------------------~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v 177 (244)
T 1cyd_A 136 SMVAHVTFP---------N-----------------------------LITYSSTKGAMTMLTKAMAMELGPHKIRVNSV 177 (244)
T ss_dssp CGGGTSCCT---------T-----------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred chhhcCCCC---------C-----------------------------cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEE
Confidence 986643211 0 16899999999999987654 48999999
Q ss_pred ecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEee
Q psy7538 250 RPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLT 329 (543)
Q Consensus 250 Rps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~ 329 (543)
||+.|+++...+. .....++..+..+ ....++++++|+|++++.++..... ...++.+++.
T Consensus 178 ~pg~v~t~~~~~~-------~~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~---~~~G~~~~v~ 238 (244)
T 1cyd_A 178 NPTVVLTDMGKKV-------SADPEFARKLKER---------HPLRKFAEVEDVVNSILFLLSDRSA---STSGGGILVD 238 (244)
T ss_dssp EECCBTTHHHHHH-------TCCHHHHHHHHHH---------STTSSCBCHHHHHHHHHHHHSGGGT---TCCSSEEEES
T ss_pred ecCcccCcccccc-------ccCHHHHHHHHhc---------CCccCCCCHHHHHHHHHHHhCchhh---cccCCEEEEC
Confidence 9999988643210 0001122222221 2236899999999999998865432 1247788887
Q ss_pred cC
Q psy7538 330 SN 331 (543)
Q Consensus 330 s~ 331 (543)
++
T Consensus 239 gG 240 (244)
T 1cyd_A 239 AG 240 (244)
T ss_dssp TT
T ss_pred CC
Confidence 76
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.3e-20 Score=180.92 Aligned_cols=199 Identities=13% Similarity=0.079 Sum_probs=139.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhC-CCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLE-PNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g-~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
+.+|+||||||||+||++++++|++.| + +|+++.|+..... .....++.++.+|
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~---~V~~~~R~~~~~~----------------------~~~~~~~~~~~~D 75 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTI---KQTLFARQPAKIH----------------------KPYPTNSQIIMGD 75 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTE---EEEEEESSGGGSC----------------------SSCCTTEEEEECC
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCc---eEEEEEcChhhhc----------------------ccccCCcEEEEec
Confidence 456899999999999999999999998 5 8999999864321 1123578999999
Q ss_pred CCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCc---
Q psy7538 107 ITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKV--- 183 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~--- 183 (543)
+++++ +++.+++++|+|||+|+.... ..++++++++|++. ++++||++||..++.....
T Consensus 76 l~d~~------~~~~~~~~~D~vv~~a~~~~~-----------~~~~~~~~~~~~~~-~~~~iV~iSS~~~~~~~~~~~~ 137 (236)
T 3qvo_A 76 VLNHA------ALKQAMQGQDIVYANLTGEDL-----------DIQANSVIAAMKAC-DVKRLIFVLSLGIYDEVPGKFV 137 (236)
T ss_dssp TTCHH------HHHHHHTTCSEEEEECCSTTH-----------HHHHHHHHHHHHHT-TCCEEEEECCCCC---------
T ss_pred CCCHH------HHHHHhcCCCEEEEcCCCCch-----------hHHHHHHHHHHHHc-CCCEEEEEecceecCCCCcccc
Confidence 99875 899999999999999986321 13467899999997 7899999999877654221
Q ss_pred -ccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCC
Q psy7538 184 -LEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPL 262 (543)
Q Consensus 184 -i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~ 262 (543)
..|. .+..+...|..+|..+... +++++++||+.++++.....
T Consensus 138 ~~~~~---------------------------------~~~~~~~~~~~~~~~l~~~---gi~~~~vrPg~i~~~~~~~~ 181 (236)
T 3qvo_A 138 EWNNA---------------------------------VIGEPLKPFRRAADAIEAS---GLEYTILRPAWLTDEDIIDY 181 (236)
T ss_dssp ----------------------------------------CGGGHHHHHHHHHHHTS---CSEEEEEEECEEECCSCCCC
T ss_pred cchhh---------------------------------cccchHHHHHHHHHHHHHC---CCCEEEEeCCcccCCCCcce
Confidence 0110 0123334445566666433 89999999999988633210
Q ss_pred CCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecC
Q psy7538 263 PGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSN 331 (543)
Q Consensus 263 ~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~ 331 (543)
............+++++|+|++++.++..+.. ..+++|+++++
T Consensus 182 ----------------------~~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~----~~g~~~~i~~~ 224 (236)
T 3qvo_A 182 ----------------------ELTSRNEPFKGTIVSRKSVAALITDIIDKPEK----HIGENIGINQP 224 (236)
T ss_dssp ----------------------EEECTTSCCSCSEEEHHHHHHHHHHHHHSTTT----TTTEEEEEECS
T ss_pred ----------------------EEeccCCCCCCcEECHHHHHHHHHHHHcCccc----ccCeeEEecCC
Confidence 01111111223589999999999999987663 24789999986
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=4.6e-20 Score=176.72 Aligned_cols=203 Identities=15% Similarity=0.133 Sum_probs=143.3
Q ss_pred CEEEEEcCcchhHHHHHHHHH-hhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKIL-RLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll-~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
|+|+||||||+||++++++|+ +.|+ +|+++.|+.. ++++++. ....++.++.+|+++
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~---~V~~~~r~~~-----~~~~~~~--------------~~~~~~~~~~~D~~d 63 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDM---HITLYGRQLK-----TRIPPEI--------------IDHERVTVIEGSFQN 63 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCC---EEEEEESSHH-----HHSCHHH--------------HTSTTEEEEECCTTC
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCc---eEEEEecCcc-----ccchhhc--------------cCCCceEEEECCCCC
Confidence 569999999999999999999 7886 8999999742 0221110 023578999999998
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCccccccc
Q psy7538 110 LKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTY 189 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i~E~~y 189 (543)
++ ++..+++++|+|||+|+.. |+. ++++++++++. ++++||++||..++........
T Consensus 64 ~~------~~~~~~~~~d~vv~~ag~~------------n~~-~~~~~~~~~~~-~~~~iv~iSs~~~~~~~~~~~~--- 120 (221)
T 3r6d_A 64 PG------XLEQAVTNAEVVFVGAMES------------GSD-MASIVKALSRX-NIRRVIGVSMAGLSGEFPVALE--- 120 (221)
T ss_dssp HH------HHHHHHTTCSEEEESCCCC------------HHH-HHHHHHHHHHT-TCCEEEEEEETTTTSCSCHHHH---
T ss_pred HH------HHHHHHcCCCEEEEcCCCC------------Chh-HHHHHHHHHhc-CCCeEEEEeeceecCCCCcccc---
Confidence 75 8999999999999999864 444 89999999987 7899999999977653211000
Q ss_pred CCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCCCCCCCC
Q psy7538 190 LPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPGWTDNI 269 (543)
Q Consensus 190 ~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~gw~d~~ 269 (543)
++ ..+ ..++.|+.+|..+|.+++.. +++++++||+.|+++...
T Consensus 121 -------------~~--------~~~----~~~~~y~~~K~~~e~~~~~~---~i~~~~vrpg~v~~~~~~--------- 163 (221)
T 3r6d_A 121 -------------KW--------TFD----NLPISYVQGERQARNVLRES---NLNYTILRLTWLYNDPEX--------- 163 (221)
T ss_dssp -------------HH--------HHH----TSCHHHHHHHHHHHHHHHHS---CSEEEEEEECEEECCTTC---------
T ss_pred -------------cc--------ccc----ccccHHHHHHHHHHHHHHhC---CCCEEEEechhhcCCCCC---------
Confidence 00 000 11138999999999998764 899999999999886211
Q ss_pred CchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHh--hhhcccCCCCCCcEEEeecC
Q psy7538 270 NGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFT--WDFLNSKESERKSVCNLTSN 331 (543)
Q Consensus 270 ~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~--~~~~~~~~~~~~~vyni~s~ 331 (543)
+..............+++.+|+|++++.++ .++.. ..++.+.++.+
T Consensus 164 ------------~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~----~~~~~~~i~~~ 211 (221)
T 3r6d_A 164 ------------TDYELIPEGAQFNDAQVSREAVVKAIFDILHAADETP----FHRTSIGVGEP 211 (221)
T ss_dssp ------------CCCEEECTTSCCCCCEEEHHHHHHHHHHHHTCSCCGG----GTTEEEEEECT
T ss_pred ------------cceeeccCCccCCCceeeHHHHHHHHHHHHHhcChhh----hhcceeeecCC
Confidence 011111111111223799999999999998 66543 23567777754
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=3e-20 Score=186.68 Aligned_cols=241 Identities=14% Similarity=0.109 Sum_probs=167.1
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
-+++|+|+||||+|+||++++++|++.|+ +|+++.|+. +++++. .+.+.... ..++.++.+|
T Consensus 23 ~l~~k~vlITGasggiG~~la~~L~~~G~---~V~~~~r~~------~~~~~~-----~~~l~~~~----~~~~~~~~~D 84 (302)
T 1w6u_A 23 SFQGKVAFITGGGTGLGKGMTTLLSSLGA---QCVIASRKM------DVLKAT-----AEQISSQT----GNKVHAIQCD 84 (302)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHH-----HHHHHHHH----SSCEEEEECC
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHH-----HHHHHHhc----CCceEEEEeC
Confidence 46889999999999999999999999986 789999864 222221 11122111 2468899999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc----cCCce
Q psy7538 107 ITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM----KNLKC 168 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~l~~ 168 (543)
+++++ +++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++++... .+..+
T Consensus 85 l~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~ 158 (302)
T 1w6u_A 85 VRDPD------MVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAA 158 (302)
T ss_dssp TTCHH------HHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCE
Confidence 99875 6666654 46999999996432 2446678999999999998887542 24579
Q ss_pred EEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCC
Q psy7538 169 FTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGM 244 (543)
Q Consensus 169 ~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~l 244 (543)
+|++||.++..... + ...|+.||+..|.+.+.++. .|+
T Consensus 159 iv~isS~~~~~~~~---------~-----------------------------~~~Y~~sK~a~~~~~~~la~~~~~~gi 200 (302)
T 1w6u_A 159 FLSITTIYAETGSG---------F-----------------------------VVPSASAKAGVEAMSKSLAAEWGKYGM 200 (302)
T ss_dssp EEEECCTHHHHCCT---------T-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred EEEEcccccccCCC---------C-----------------------------cchhHHHHHHHHHHHHHHHHHhhhcCc
Confidence 99999987653211 0 16899999999999887654 489
Q ss_pred cEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCc
Q psy7538 245 PCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKS 324 (543)
Q Consensus 245 p~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~ 324 (543)
+++++||+.|+++.... ..............+. ....+++++|+|++++.++..... ...++
T Consensus 201 ~v~~v~Pg~v~t~~~~~------~~~~~~~~~~~~~~~~---------p~~~~~~~~dva~~~~~l~~~~~~---~~~G~ 262 (302)
T 1w6u_A 201 RFNVIQPGPIKTKGAFS------RLDPTGTFEKEMIGRI---------PCGRLGTVEELANLAAFLCSDYAS---WINGA 262 (302)
T ss_dssp EEEEEEECCBCC------------CCTTSHHHHHHHTTC---------TTSSCBCHHHHHHHHHHHTSGGGT---TCCSC
T ss_pred EEEEEeeccCCCcchhh------hcccchhhHHHHHhcC---------CcCCCCCHHHHHHHHHHHcCCccc---ccCCC
Confidence 99999999998762110 1000001111222211 123578899999999988865432 12478
Q ss_pred EEEeecCCCCcccHHHHHHHHhhhh
Q psy7538 325 VCNLTSNKDYKITWQEICDIGKDIV 349 (543)
Q Consensus 325 vyni~s~~~~~~t~~e~~~~i~~~~ 349 (543)
+|++.++ ..++++++++.+.+..
T Consensus 263 ~~~v~gg--~~~~~~~~~~~~~~~~ 285 (302)
T 1w6u_A 263 VIKFDGG--EEVLISGEFNDLRKVT 285 (302)
T ss_dssp EEEESTT--HHHHHHSTTGGGGGCC
T ss_pred EEEECCC--eeeccCCccccchhhc
Confidence 9999998 7788888877777665
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.84 E-value=9.6e-20 Score=178.76 Aligned_cols=224 Identities=13% Similarity=0.141 Sum_probs=157.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||||+||++++++|++.|+ +|+++.|+.. +++++ .+.++. ...++.++.+|+
T Consensus 11 l~~k~vlItGasggiG~~la~~l~~~G~---~V~~~~r~~~------~~~~~-----~~~l~~-----~~~~~~~~~~D~ 71 (260)
T 3awd_A 11 LDNRVAIVTGGAQNIGLACVTALAEAGA---RVIIADLDEA------MATKA-----VEDLRM-----EGHDVSSVVMDV 71 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHH------HHHHH-----HHHHHH-----TTCCEEEEECCT
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHH-----HHHHHh-----cCCceEEEEecC
Confidence 5789999999999999999999999986 8899998642 22211 111221 124688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCC-C-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIR-F-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~-~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~ 169 (543)
++++ +++.+++ ++|+|||+||... . .+.+...+++|+.|+.++++++... .+..++
T Consensus 72 ~~~~------~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~i 145 (260)
T 3awd_A 72 TNTE------SVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVI 145 (260)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEE
Confidence 9875 6666654 6899999999654 1 1335678999999999999988652 256899
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||.++...... .| .+.|+.||+..|.+++..+. ++++
T Consensus 146 v~~sS~~~~~~~~~-------~~-----------------------------~~~Y~~sK~a~~~~~~~l~~e~~~~gi~ 189 (260)
T 3awd_A 146 VAIGSMSGLIVNRP-------QQ-----------------------------QAAYNASKAGVHQYIRSLAAEWAPHGIR 189 (260)
T ss_dssp EEECCGGGTSCCSS-------SC-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred EEEecchhcccCCC-------CC-----------------------------ccccHHHHHHHHHHHHHHHHHhhhcCeE
Confidence 99999876532110 00 16899999999999887654 4899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
+.++||+.|+++...+ +...+ .+...+..+. ....+++++|+|++++.++..... ...+++
T Consensus 190 v~~v~pg~v~t~~~~~------~~~~~-~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~~~---~~~G~~ 250 (260)
T 3awd_A 190 ANAVAPTYIETTLTRF------GMEKP-ELYDAWIAGT---------PMGRVGQPDEVASVVQFLASDAAS---LMTGAI 250 (260)
T ss_dssp EEEEEECCBCCTTTHH------HHTCH-HHHHHHHHTC---------TTSSCBCHHHHHHHHHHHHSGGGT---TCCSCE
T ss_pred EEEEEeeeeccchhhc------ccCCh-HHHHHHHhcC---------CcCCCCCHHHHHHHHHHHhCchhc---cCCCcE
Confidence 9999999998875320 00011 1222222221 123578999999999988765432 125789
Q ss_pred EEeecC
Q psy7538 326 CNLTSN 331 (543)
Q Consensus 326 yni~s~ 331 (543)
|++.++
T Consensus 251 ~~v~gg 256 (260)
T 3awd_A 251 VNVDAG 256 (260)
T ss_dssp EEESTT
T ss_pred EEECCc
Confidence 999886
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=7.7e-20 Score=177.78 Aligned_cols=218 Identities=13% Similarity=0.206 Sum_probs=155.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||+|+||++++++|++.|+ +|+++.|+. ++++++.+ + ..++.++.+|+
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G~---~V~~~~r~~------~~~~~~~~---------~-----~~~~~~~~~D~ 61 (244)
T 3d3w_A 5 LAGRRVLVTGAGKGIGRGTVQALHATGA---RVVAVSRTQ------ADLDSLVR---------E-----CPGIEPVCVDL 61 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHHH---------H-----STTCEEEECCT
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHHH---------H-----cCCCCEEEEeC
Confidence 5789999999999999999999999986 788998864 23322211 1 12456779999
Q ss_pred CCCCCCCCHHHHHHHhc---CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cC-CceEEEEe
Q psy7538 108 TQLKLGISEIDKKELID---NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KN-LKCFTYIS 173 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~---~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~-l~~~V~vS 173 (543)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... .+ ..++|++|
T Consensus 62 ~~~~------~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~s 135 (244)
T 3d3w_A 62 GDWE------ATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVS 135 (244)
T ss_dssp TCHH------HHHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEEC
T ss_pred CCHH------HHHHHHHHcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeC
Confidence 9875 7777776 58999999997542 2345678999999999999888653 13 57999999
Q ss_pred cCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEEE
Q psy7538 174 TAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMIL 249 (543)
Q Consensus 174 T~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~Il 249 (543)
|..+..... + .+.|+.||+..|.+++.++. .++++.++
T Consensus 136 S~~~~~~~~---------~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v 177 (244)
T 3d3w_A 136 SQCSQRAVT---------N-----------------------------HSVYCSTKGALDMLTKVMALELGPHKIRVNAV 177 (244)
T ss_dssp CGGGTSCCT---------T-----------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred chhhccCCC---------C-----------------------------CchHHHHHHHHHHHHHHHHHHhcccCeEEEEE
Confidence 986643211 0 16899999999999987654 48999999
Q ss_pred ecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEee
Q psy7538 250 RPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLT 329 (543)
Q Consensus 250 Rps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~ 329 (543)
||+.|+++..... |.+ + ........+ ....++++++|+|++++.++..... ...+++|++.
T Consensus 178 ~Pg~v~t~~~~~~--~~~----~-~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~---~~~G~~~~v~ 238 (244)
T 3d3w_A 178 NPTVVMTSMGQAT--WSD----P-HKAKTMLNR---------IPLGKFAEVEHVVNAILFLLSDRSG---MTTGSTLPVE 238 (244)
T ss_dssp EECCBTTTTHHHH--SCS----T-THHHHHHHT---------CTTCSCBCHHHHHHHHHHHHSGGGT---TCCSCEEEES
T ss_pred Eeccccccchhhh--ccC----h-HHHHHHHhh---------CCCCCCcCHHHHHHHHHHHcCcccc---CCCCCEEEEC
Confidence 9999987643210 000 0 111112111 1234788999999999988865432 1247899998
Q ss_pred cC
Q psy7538 330 SN 331 (543)
Q Consensus 330 s~ 331 (543)
++
T Consensus 239 gG 240 (244)
T 3d3w_A 239 GG 240 (244)
T ss_dssp TT
T ss_pred CC
Confidence 76
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=6.9e-20 Score=177.61 Aligned_cols=205 Identities=14% Similarity=0.134 Sum_probs=152.4
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+|+|+||||||+||++++++|++.|+ +|+++.|+.. .+++.++.+|+++
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~---~V~~~~r~~~----------------------------~~~~~~~~~D~~~ 50 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGY---RVVVLDLRRE----------------------------GEDLIYVEGDVTR 50 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTC---EEEEEESSCC----------------------------SSSSEEEECCTTC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEccCcc----------------------------ccceEEEeCCCCC
Confidence 68999999999999999999999987 7899999753 2345789999998
Q ss_pred CCCCCCHHHHHHHhc------CccEEEEcCccCCCc-------c----cHHHHHHHHHHHHHHHHHHHHhc-cC------
Q psy7538 110 LKLGISEIDKKELID------NVDIVYHVAATIRFD-------E----PIKTAVILNTRGTRDMLELSKQM-KN------ 165 (543)
Q Consensus 110 ~~lgls~~~~~~l~~------~vd~ViH~AA~v~~~-------~----~~~~~~~~Nv~gt~~ll~~a~~~-~~------ 165 (543)
++ +++.+++ ++|+|||+||..... + .++..+++|+.|+.++++++... ..
T Consensus 51 ~~------~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~ 124 (242)
T 1uay_A 51 EE------DVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAE 124 (242)
T ss_dssp HH------HHHHHHHHHHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTT
T ss_pred HH------HHHHHHHHHHhhCCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCC
Confidence 75 6777766 789999999975421 1 56788999999999999998763 11
Q ss_pred --CceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh--
Q psy7538 166 --LKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-- 241 (543)
Q Consensus 166 --l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-- 241 (543)
..++|++||..+..... ....|+.||+..|.+.+..+.
T Consensus 125 ~~~~~iv~~sS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~l~~e~ 166 (242)
T 1uay_A 125 GQRGVIVNTASVAAFEGQI--------------------------------------GQAAYAASKGGVVALTLPAAREL 166 (242)
T ss_dssp SCSEEEEEECCTHHHHCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEeCChhhccCCC--------------------------------------CCchhhHHHHHHHHHHHHHHHHH
Confidence 13899999986653211 016899999999998877654
Q ss_pred --cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCC
Q psy7538 242 --LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKE 319 (543)
Q Consensus 242 --~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~ 319 (543)
.+++++++||+.|+++..... +..+......+... ...+++++|+|++++.++.....
T Consensus 167 ~~~gi~v~~v~Pg~v~t~~~~~~---------~~~~~~~~~~~~~~--------~~~~~~~~dva~~~~~l~~~~~~--- 226 (242)
T 1uay_A 167 AGWGIRVVTVAPGLFDTPLLQGL---------PEKAKASLAAQVPF--------PPRLGRPEEYAALVLHILENPML--- 226 (242)
T ss_dssp GGGTEEEEEEEECSCSSHHHHTS---------CHHHHHHHHTTCCS--------SCSCCCHHHHHHHHHHHHHCTTC---
T ss_pred hhcCcEEEEEEeccCcchhhhcc---------chhHHHHHHhhCCC--------cccCCCHHHHHHHHHHHhcCCCC---
Confidence 489999999999988743211 11122222222110 13478899999999988876332
Q ss_pred CCCCcEEEeecC
Q psy7538 320 SERKSVCNLTSN 331 (543)
Q Consensus 320 ~~~~~vyni~s~ 331 (543)
.+++|++.++
T Consensus 227 --~G~~~~v~gG 236 (242)
T 1uay_A 227 --NGEVVRLDGA 236 (242)
T ss_dssp --CSCEEEESTT
T ss_pred --CCcEEEEcCC
Confidence 5889999887
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.1e-20 Score=176.46 Aligned_cols=185 Identities=15% Similarity=0.144 Sum_probs=140.1
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|+||||||+||++++++|+ +|+ +|+++.|+.. .+.+|++++
T Consensus 4 M~vlVtGasg~iG~~~~~~l~-~g~---~V~~~~r~~~---------------------------------~~~~D~~~~ 46 (202)
T 3d7l_A 4 MKILLIGASGTLGSAVKERLE-KKA---EVITAGRHSG---------------------------------DVTVDITNI 46 (202)
T ss_dssp CEEEEETTTSHHHHHHHHHHT-TTS---EEEEEESSSS---------------------------------SEECCTTCH
T ss_pred cEEEEEcCCcHHHHHHHHHHH-CCC---eEEEEecCcc---------------------------------ceeeecCCH
Confidence 489999999999999999999 886 7899998641 367899987
Q ss_pred CCCCCHHHHHHHhcC---ccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc-cCCceEEEEecCcccc
Q psy7538 111 KLGISEIDKKELIDN---VDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM-KNLKCFTYISTAYCHP 179 (543)
Q Consensus 111 ~lgls~~~~~~l~~~---vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~vST~y~~~ 179 (543)
+ +++.++++ +|+|||+||.... .+.++..+++|+.|+.++++++.+. .+-.++|++||.++..
T Consensus 47 ~------~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~ 120 (202)
T 3d7l_A 47 D------SIKKMYEQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMED 120 (202)
T ss_dssp H------HHHHHHHHHCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTS
T ss_pred H------HHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcC
Confidence 5 67776664 8999999996532 1334567899999999999999875 1126999999986643
Q ss_pred CCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh---cCCcEEEEecCeeee
Q psy7538 180 SEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME---LGMPCMILRPSIVVP 256 (543)
Q Consensus 180 ~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~---~~lp~~IlRps~V~G 256 (543)
... + ...|+.+|+..|.+++.++. .++++.++||+.|++
T Consensus 121 ~~~---------~-----------------------------~~~Y~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~ 162 (202)
T 3d7l_A 121 PIV---------Q-----------------------------GASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEE 162 (202)
T ss_dssp CCT---------T-----------------------------CHHHHHHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGG
T ss_pred CCC---------c-----------------------------cHHHHHHHHHHHHHHHHHHHHccCCeEEEEEecCccCC
Confidence 211 0 16899999999999998775 389999999999877
Q ss_pred cCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEee
Q psy7538 257 IYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLT 329 (543)
Q Consensus 257 ~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~ 329 (543)
+... . ++.....++++++|+|++++.++.... .+++||+.
T Consensus 163 ~~~~------------------~---------~~~~~~~~~~~~~dva~~~~~~~~~~~------~G~~~~vd 202 (202)
T 3d7l_A 163 SWDK------------------L---------EPFFEGFLPVPAAKVARAFEKSVFGAQ------TGESYQVY 202 (202)
T ss_dssp GHHH------------------H---------GGGSTTCCCBCHHHHHHHHHHHHHSCC------CSCEEEEC
T ss_pred chhh------------------h---------hhhccccCCCCHHHHHHHHHHhhhccc------cCceEecC
Confidence 6210 0 112234678999999999988773322 47788873
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.1e-20 Score=178.83 Aligned_cols=187 Identities=13% Similarity=0.091 Sum_probs=141.1
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|+||||||+||++++++|++. +|+++.|+. ++++++. .+. . . .++.+|++++
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~-----~V~~~~r~~------~~~~~~~---------~~~-~----~-~~~~~D~~~~ 54 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH-----DLLLSGRRA------GALAELA---------REV-G----A-RALPADLADE 54 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS-----EEEEECSCH------HHHHHHH---------HHH-T----C-EECCCCTTSH
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC-----CEEEEECCH------HHHHHHH---------Hhc-c----C-cEEEeeCCCH
Confidence 68999999999999999999986 788998864 2222211 111 1 1 7888999987
Q ss_pred CCCCCHHHHHHHhc---CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccC
Q psy7538 111 KLGISEIDKKELID---NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPS 180 (543)
Q Consensus 111 ~lgls~~~~~~l~~---~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~ 180 (543)
+ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++++. +.++||++||..+...
T Consensus 55 ~------~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~sS~~~~~~ 127 (207)
T 2yut_A 55 L------EAKALLEEAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQ-KGARAVFFGAYPRYVQ 127 (207)
T ss_dssp H------HHHHHHHHHCSEEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEE-EEEEEEEECCCHHHHS
T ss_pred H------HHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhc-CCcEEEEEcChhhccC
Confidence 5 7888877 89999999997542 2456778999999999999999654 6789999999866532
Q ss_pred CCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEEEecCeeee
Q psy7538 181 EKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMILRPSIVVP 256 (543)
Q Consensus 181 ~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~IlRps~V~G 256 (543)
.. + .+.|+.||+..|.+++.++. .+++++++||+.|++
T Consensus 128 ~~---------~-----------------------------~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t 169 (207)
T 2yut_A 128 VP---------G-----------------------------FAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVAT 169 (207)
T ss_dssp ST---------T-----------------------------BHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCS
T ss_pred CC---------C-----------------------------cchHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccC
Confidence 11 0 16899999999999887654 489999999999877
Q ss_pred cCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcc
Q psy7538 257 IYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLN 316 (543)
Q Consensus 257 ~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~ 316 (543)
+.. .+.+....++++++|+|++++.++..+..
T Consensus 170 ~~~----------------------------~~~~~~~~~~~~~~dva~~~~~~~~~~~~ 201 (207)
T 2yut_A 170 GLW----------------------------APLGGPPKGALSPEEAARKVLEGLFREPV 201 (207)
T ss_dssp GGG----------------------------GGGTSCCTTCBCHHHHHHHHHHHHC--CC
T ss_pred CCc----------------------------cccCCCCCCCCCHHHHHHHHHHHHhCCCC
Confidence 631 01123347899999999999999876543
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.2e-19 Score=178.62 Aligned_cols=207 Identities=12% Similarity=0.115 Sum_probs=154.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||+|+||++++++|++.|+ +|+++.|+.... ...++.++.+|+
T Consensus 26 ~~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~~-------------------------~~~~~~~~~~Dv 77 (260)
T 3un1_A 26 NQQKVVVITGASQGIGAGLVRAYRDRNY---RVVATSRSIKPS-------------------------ADPDIHTVAGDI 77 (260)
T ss_dssp TTCCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEESSCCCC-------------------------SSTTEEEEESCT
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCChhhc-------------------------ccCceEEEEccC
Confidence 5789999999999999999999999997 889999976431 223788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHH----hccCCceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSK----QMKNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~----~~~~l~~~ 169 (543)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++. +. +..++
T Consensus 78 ~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~i 150 (260)
T 3un1_A 78 SKPE------TADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQ-GSGHI 150 (260)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEE
T ss_pred CCHH------HHHHHHHHHHHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEE
Confidence 9875 6666665 79999999997532 24466789999999999999873 33 56899
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+...... .+ ...|+.||+..|.+.+..+. .|++
T Consensus 151 v~isS~~~~~~~~~-------~~-----------------------------~~~Y~~sKaa~~~l~~~la~e~~~~gI~ 194 (260)
T 3un1_A 151 VSITTSLVDQPMVG-------MP-----------------------------SALASLTKGGLNAVTRSLAMEFSRSGVR 194 (260)
T ss_dssp EEECCTTTTSCBTT-------CC-----------------------------CHHHHHHHHHHHHHHHHHHHHTTTTTEE
T ss_pred EEEechhhccCCCC-------Cc-----------------------------cHHHHHHHHHHHHHHHHHHHHhCcCCeE
Confidence 99999865322110 01 16899999999999987765 4899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
+.+++|+.|.++...+ ........ ......+..++|+|++++.+..... ..|++
T Consensus 195 vn~v~PG~v~t~~~~~------------~~~~~~~~---------~~p~~r~~~~~dva~av~~L~~~~~-----itG~~ 248 (260)
T 3un1_A 195 VNAVSPGVIKTPMHPA------------ETHSTLAG---------LHPVGRMGEIRDVVDAVLYLEHAGF-----ITGEI 248 (260)
T ss_dssp EEEEEECCBCCTTSCG------------GGHHHHHT---------TSTTSSCBCHHHHHHHHHHHHHCTT-----CCSCE
T ss_pred EEEEeecCCCCCCCCH------------HHHHHHhc---------cCCCCCCcCHHHHHHHHHHhcccCC-----CCCcE
Confidence 9999999998874321 01111111 1233467789999999988833222 35889
Q ss_pred EEeecC
Q psy7538 326 CNLTSN 331 (543)
Q Consensus 326 yni~s~ 331 (543)
+++.+|
T Consensus 249 i~vdGG 254 (260)
T 3un1_A 249 LHVDGG 254 (260)
T ss_dssp EEESTT
T ss_pred EEECCC
Confidence 999887
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=1.3e-19 Score=179.99 Aligned_cols=248 Identities=12% Similarity=0.078 Sum_probs=156.0
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||+|+||++++++|++.|+ +|+++.|+. ++++++. +.+... .....++.++.+|+
T Consensus 4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~------~~~~~~~-----~~~~~~--~~~~~~~~~~~~D~ 67 (278)
T 1spx_A 4 FAEKVAIITGSSNGIGRATAVLFAREGA---KVTITGRHA------ERLEETR-----QQILAA--GVSEQNVNSVVADV 67 (278)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH-----HHHHHT--TCCGGGEEEEECCT
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHH-----HHHHhc--ccCCCceeEEeccc
Confidence 5789999999999999999999999987 789999864 2332221 111100 01124688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCC-----------CcccHHHHHHHHHHHHHHHHHHHHhc---cCC
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIR-----------FDEPIKTAVILNTRGTRDMLELSKQM---KNL 166 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~-----------~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l 166 (543)
++++ +++.+++ ++|+|||+||... ..+.++..+++|+.|+.++++++... .+
T Consensus 68 ~~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~- 140 (278)
T 1spx_A 68 TTDA------GQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK- 140 (278)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-
Confidence 9875 6776665 7999999999653 22345668999999999999988653 14
Q ss_pred ceEEEEecCcc-ccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----
Q psy7538 167 KCFTYISTAYC-HPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME---- 241 (543)
Q Consensus 167 ~~~V~vST~y~-~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~---- 241 (543)
.++|++||..+ ..... + ...|+.||+..|.+.+..+.
T Consensus 141 g~iv~isS~~~~~~~~~---------~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~ 182 (278)
T 1spx_A 141 GEIVNISSIASGLHATP---------D-----------------------------FPYYSIAKAAIDQYTRNTAIDLIQ 182 (278)
T ss_dssp CEEEEECCTTSSSSCCT---------T-----------------------------SHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred CeEEEEecccccccCCC---------C-----------------------------ccHHHHHHHHHHHHHHHHHHHHHh
Confidence 79999999865 32210 0 15899999999999877653
Q ss_pred cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCC
Q psy7538 242 LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESE 321 (543)
Q Consensus 242 ~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~ 321 (543)
+|+++.++||+.|.++.......-................. .....+++++|+|++++.++..... . -.
T Consensus 183 ~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------~p~~~~~~~~dvA~~v~~l~s~~~~-~-~~ 251 (278)
T 1spx_A 183 HGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKEC---------VPAGVMGQPQDIAEVIAFLADRKTS-S-YI 251 (278)
T ss_dssp GTCEEEEEEECCBCCCC--------------HHHHHHHHHH---------CTTSSCBCHHHHHHHHHHHHCHHHH-T-TC
T ss_pred cCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhc---------CCCcCCCCHHHHHHHHHHHcCcccc-C-cc
Confidence 58999999999998764321000000000000001111110 0113578999999999988765432 0 01
Q ss_pred CCcEEEeecCCCCcccHHHHHHHHhhhh
Q psy7538 322 RKSVCNLTSNKDYKITWQEICDIGKDIV 349 (543)
Q Consensus 322 ~~~vyni~s~~~~~~t~~e~~~~i~~~~ 349 (543)
.|+++++.++ ..+++.++++.+.+..
T Consensus 252 tG~~~~vdgG--~~~~~~~~~~~~~~~~ 277 (278)
T 1spx_A 252 IGHQLVVDGG--SSLIMGLHCQDFAKLL 277 (278)
T ss_dssp CSCEEEESTT--GGGC------------
T ss_pred cCcEEEECCC--cccccCcccccHHHHh
Confidence 4889999988 7899999998887653
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.83 E-value=5e-20 Score=181.12 Aligned_cols=225 Identities=14% Similarity=0.120 Sum_probs=158.5
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|+||++++++|++.|+ +|+++.|+. +++++..+ ....++.++.+|+
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~------~~~~~~~~-------------~~~~~~~~~~~D~ 63 (259)
T 4e6p_A 6 LEGKSALITGSARGIGRAFAEAYVREGA---TVAIADIDI------ERARQAAA-------------EIGPAAYAVQMDV 63 (259)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHHH-------------HHCTTEEEEECCT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHHH-------------HhCCCceEEEeeC
Confidence 6789999999999999999999999997 788888863 23322211 1124678999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc----cCCceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM----KNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~l~~~ 169 (543)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... +.-.++
T Consensus 64 ~~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~i 137 (259)
T 4e6p_A 64 TRQD------SIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKI 137 (259)
T ss_dssp TCHH------HHHHHHHHHHHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEE
Confidence 9875 6766665 79999999997542 2456678999999999999988653 114689
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+...... ...|+.||+..|.+.+..+. .+++
T Consensus 138 v~isS~~~~~~~~~--------------------------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~ 179 (259)
T 4e6p_A 138 INMASQAGRRGEAL--------------------------------------VAIYCATKAAVISLTQSAGLDLIKHRIN 179 (259)
T ss_dssp EEECCGGGTSCCTT--------------------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred EEECChhhccCCCC--------------------------------------ChHHHHHHHHHHHHHHHHHHHhhhcCCE
Confidence 99999866432110 16899999999999987664 5899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhc---CceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCC
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGK---GVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~---g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~ 322 (543)
+.+++|+.|.++..+.. ..++..... +......++......+.+++|+|++++.++..... -..
T Consensus 180 vn~v~PG~v~t~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~---~it 246 (259)
T 4e6p_A 180 VNAIAPGVVDGEHWDGV----------DALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLASAESD---YIV 246 (259)
T ss_dssp EEEEEECCBCSTTHHHH----------HHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHHHTTSGGGT---TCC
T ss_pred EEEEEECCCccchhhhh----------hhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCccC---CCC
Confidence 99999999987642210 011111110 11111122334556789999999998887754432 135
Q ss_pred CcEEEeecC
Q psy7538 323 KSVCNLTSN 331 (543)
Q Consensus 323 ~~vyni~s~ 331 (543)
|++|++.++
T Consensus 247 G~~i~vdgG 255 (259)
T 4e6p_A 247 SQTYNVDGG 255 (259)
T ss_dssp SCEEEESTT
T ss_pred CCEEEECcC
Confidence 889999987
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.2e-19 Score=178.52 Aligned_cols=232 Identities=11% Similarity=0.124 Sum_probs=152.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcC--cCCCCceEEEEc
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRG--KSILQKIQVISG 105 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~--~~~~~~v~~i~g 105 (543)
+++|+|+||||+|+||++++++|++.|+ +|+++.|+.. +++++.+ .+..... .....++.++.+
T Consensus 5 ~~~k~vlITGasggiG~~la~~l~~~G~---~V~~~~r~~~------~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 70 (264)
T 2pd6_A 5 LRSALALVTGAGSGIGRAVSVRLAGEGA---TVAACDLDRA------AAQETVR-----LLGGPGSKEGPPRGNHAAFQA 70 (264)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSHH------HHHHHHH-----TC------------CCEEEEC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCChH------HHHHHHH-----HHHhcCccccccCcceEEEEe
Confidence 5789999999999999999999999986 7899998642 2222211 0100000 000146889999
Q ss_pred cCCCCCCCCCHHHHHHHhcC-------c-cEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cC-C
Q psy7538 106 DITQLKLGISEIDKKELIDN-------V-DIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KN-L 166 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~~-------v-d~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~-l 166 (543)
|+++++ +++.++++ + |+|||+||.... .+.++..+++|+.|+.++++++... .+ .
T Consensus 71 D~~~~~------~~~~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ 144 (264)
T 2pd6_A 71 DVSEAR------AARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCR 144 (264)
T ss_dssp CTTSHH------HHHHHHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC
T ss_pred cCCCHH------HHHHHHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCC
Confidence 999875 66666554 4 999999997643 2446678999999999999998763 12 4
Q ss_pred ceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----c
Q psy7538 167 KCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----L 242 (543)
Q Consensus 167 ~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~ 242 (543)
.+||++||..+..... + ...|+.||+..|.+.+..+. .
T Consensus 145 g~iv~isS~~~~~~~~---------~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~ 186 (264)
T 2pd6_A 145 GSIINISSIVGKVGNV---------G-----------------------------QTNYAASKAGVIGLTQTAARELGRH 186 (264)
T ss_dssp EEEEEECCTHHHHCCT---------T-----------------------------BHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred ceEEEECChhhccCCC---------C-----------------------------ChhhHHHHHHHHHHHHHHHHHhhhc
Confidence 6999999986543211 0 16899999999988877654 5
Q ss_pred CCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCC
Q psy7538 243 GMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322 (543)
Q Consensus 243 ~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~ 322 (543)
+++++++||+.|+++.....+ ..+...+.. ......+++++|+|++++.++..... -..
T Consensus 187 gi~v~~v~Pg~v~t~~~~~~~---------~~~~~~~~~---------~~~~~~~~~~~dva~~~~~l~~~~~~---~~~ 245 (264)
T 2pd6_A 187 GIRCNSVLPGFIATPMTQKVP---------QKVVDKITE---------MIPMGHLGDPEDVADVVAFLASEDSG---YIT 245 (264)
T ss_dssp TEEEEEEEECSBCSCC-------------------CTGG---------GCTTCSCBCHHHHHHHHHHHHSGGGT---TCC
T ss_pred CeEEEEEeeecccccchhhcC---------HHHHHHHHH---------hCCCCCCCCHHHHHHHHHHHcCCccc---CCC
Confidence 899999999999887543211 001111111 11123578899999999988865432 135
Q ss_pred CcEEEeecCCCCcccHHH
Q psy7538 323 KSVCNLTSNKDYKITWQE 340 (543)
Q Consensus 323 ~~vyni~s~~~~~~t~~e 340 (543)
++.+++.++ ..+++..
T Consensus 246 G~~~~v~gg--~~~~~~~ 261 (264)
T 2pd6_A 246 GTSVEVTGG--LFMAENL 261 (264)
T ss_dssp SCEEEESTT--C------
T ss_pred CCEEEECCC--ceecccc
Confidence 789999887 5555443
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.4e-19 Score=177.24 Aligned_cols=221 Identities=13% Similarity=0.162 Sum_probs=156.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecC-CCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRT-KKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~-~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
+++|+|+||||+|+||++++++|++.|+ +|+++.|+ ... .+.+.+ .++ ....++.++.+|
T Consensus 5 l~~k~vlVTGasggiG~~~a~~l~~~G~---~V~~~~r~~~~~---~~~~~~--------~~~-----~~~~~~~~~~~D 65 (258)
T 3afn_B 5 LKGKRVLITGSSQGIGLATARLFARAGA---KVGLHGRKAPAN---IDETIA--------SMR-----ADGGDAAFFAAD 65 (258)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCCTT---HHHHHH--------HHH-----HTTCEEEEEECC
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEECCCchhh---HHHHHH--------HHH-----hcCCceEEEECC
Confidence 5789999999999999999999999987 78999997 322 111111 111 112478899999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CccEEEEcCcc-CCC-------cccHHHHHHHHHHHHHHHHHHHHhc----c---
Q psy7538 107 ITQLKLGISEIDKKELID-------NVDIVYHVAAT-IRF-------DEPIKTAVILNTRGTRDMLELSKQM----K--- 164 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~-------~vd~ViH~AA~-v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~--- 164 (543)
+++++ +++.+++ ++|+|||+||. ... .+.++..+++|+.|+.++++++... +
T Consensus 66 ~~~~~------~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 139 (258)
T 3afn_B 66 LATSE------ACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKAS 139 (258)
T ss_dssp TTSHH------HHHHHHHHHHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCC
Confidence 99875 6777666 79999999996 321 1335668999999999998877532 1
Q ss_pred -CCceEEEEecCcccc-CCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-
Q psy7538 165 -NLKCFTYISTAYCHP-SEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME- 241 (543)
Q Consensus 165 -~l~~~V~vST~y~~~-~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~- 241 (543)
...++|++||.++.. ... + ...|+.||+..|.+++.++.
T Consensus 140 ~~~~~iv~~sS~~~~~~~~~---------~-----------------------------~~~Y~~sK~a~~~~~~~~~~e 181 (258)
T 3afn_B 140 GQTSAVISTGSIAGHTGGGP---------G-----------------------------AGLYGAAKAFLHNVHKNWVDF 181 (258)
T ss_dssp TSCEEEEEECCTHHHHCCCT---------T-----------------------------CHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEecchhhccCCCC---------C-----------------------------chHHHHHHHHHHHHHHHHHHh
Confidence 126899999987653 110 1 16899999999999887654
Q ss_pred ---cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccC
Q psy7538 242 ---LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSK 318 (543)
Q Consensus 242 ---~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~ 318 (543)
.++++.++||+.|+++..... . ..+...+..+. ...++++++|+|++++.++..... .
T Consensus 182 ~~~~gi~v~~v~Pg~v~t~~~~~~--------~-~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~~~-~ 242 (258)
T 3afn_B 182 HTKDGVRFNIVSPGTVDTAFHADK--------T-QDVRDRISNGI---------PMGRFGTAEEMAPAFLFFASHLAS-G 242 (258)
T ss_dssp HGGGTEEEEEEEECSBSSGGGTTC--------C-HHHHHHHHTTC---------TTCSCBCGGGTHHHHHHHHCHHHH-T
T ss_pred hcccCeEEEEEeCCCccccccccc--------C-HHHHHHHhccC---------CCCcCCCHHHHHHHHHHHhCcchh-c
Confidence 489999999999988754321 1 12233333221 234689999999999988865321 0
Q ss_pred CCCCCcEEEeecC
Q psy7538 319 ESERKSVCNLTSN 331 (543)
Q Consensus 319 ~~~~~~vyni~s~ 331 (543)
...+++|+++++
T Consensus 243 -~~~G~~~~v~gg 254 (258)
T 3afn_B 243 -YITGQVLDINGG 254 (258)
T ss_dssp -TCCSEEEEESTT
T ss_pred -cccCCEEeECCC
Confidence 024789999876
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.83 E-value=1.8e-19 Score=177.53 Aligned_cols=220 Identities=13% Similarity=0.137 Sum_probs=143.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||+|+||++++++|++.|+ +|+++.|+. ++++++. +.+.. ...++.++.+|+
T Consensus 12 l~~k~vlITGasggiG~~la~~l~~~G~---~V~~~~r~~------~~~~~~~-----~~~~~-----~~~~~~~~~~D~ 72 (266)
T 1xq1_A 12 LKAKTVLVTGGTKGIGHAIVEEFAGFGA---VIHTCARNE------YELNECL-----SKWQK-----KGFQVTGSVCDA 72 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH-----HHHHH-----TTCCEEEEECCT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHH-----HHHHh-----cCCeeEEEECCC
Confidence 5789999999999999999999999986 788998864 2222211 11211 124688999999
Q ss_pred CCCCCCCCHHHHHHHh--------cCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHH----hccCCce
Q psy7538 108 TQLKLGISEIDKKELI--------DNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSK----QMKNLKC 168 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~--------~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~----~~~~l~~ 168 (543)
++++ +++.++ .++|+|||+||.... .+.++..+++|+.|+.++++++. +. +.++
T Consensus 73 ~~~~------~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~ 145 (266)
T 1xq1_A 73 SLRP------EREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKAS-GCGN 145 (266)
T ss_dssp TSHH------HHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-SSCE
T ss_pred CCHH------HHHHHHHHHHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcE
Confidence 9875 566655 578999999997532 24456789999999999999984 43 5789
Q ss_pred EEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCC
Q psy7538 169 FTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGM 244 (543)
Q Consensus 169 ~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~l 244 (543)
+|++||..+..... ....|+.||+..|.+++..+. .++
T Consensus 146 iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi 187 (266)
T 1xq1_A 146 IIFMSSIAGVVSAS--------------------------------------VGSIYSATKGALNQLARNLACEWASDGI 187 (266)
T ss_dssp EEEEC------------------------------------------------CCHHHHHHHHHHHHHHHHHHHHGGGTC
T ss_pred EEEEccchhccCCC--------------------------------------CCchHHHHHHHHHHHHHHHHHHHhHhCc
Confidence 99999986543210 016899999999999987654 489
Q ss_pred cEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCc
Q psy7538 245 PCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKS 324 (543)
Q Consensus 245 p~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~ 324 (543)
+++++||+.|+++...... ...+...... ......+++++|+|++++.++..... ...++
T Consensus 188 ~v~~v~Pg~v~t~~~~~~~--------~~~~~~~~~~---------~~~~~~~~~~~dva~~~~~l~~~~~~---~~~G~ 247 (266)
T 1xq1_A 188 RANAVAPAVIATPLAEAVY--------DDEFKKVVIS---------RKPLGRFGEPEEVSSLVAFLCMPAAS---YITGQ 247 (266)
T ss_dssp EEEEEECCSCC------------------------------------------CCGGGGHHHHHHHTSGGGT---TCCSC
T ss_pred EEEEEeeCCCccchhhhhc--------CHHHHHHHHh---------cCCCCCCcCHHHHHHHHHHHcCcccc---CccCc
Confidence 9999999999887543210 0001111111 01112478899999999988865432 12478
Q ss_pred EEEeecC
Q psy7538 325 VCNLTSN 331 (543)
Q Consensus 325 vyni~s~ 331 (543)
++++.++
T Consensus 248 ~~~v~gG 254 (266)
T 1xq1_A 248 TICVDGG 254 (266)
T ss_dssp EEECCCC
T ss_pred EEEEcCC
Confidence 9999887
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=6.4e-20 Score=181.39 Aligned_cols=228 Identities=16% Similarity=0.122 Sum_probs=157.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||+|+||++++++|++.|+ +|+++.|.. .++++++ .+.++. ...++.++.+|+
T Consensus 19 ~~~k~vlItGasggiG~~la~~l~~~G~---~v~~~~r~~-----~~~~~~~-----~~~l~~-----~~~~~~~~~~D~ 80 (274)
T 1ja9_A 19 LAGKVALTTGAGRGIGRGIAIELGRRGA---SVVVNYGSS-----SKAAEEV-----VAELKK-----LGAQGVAIQADI 80 (274)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSC-----HHHHHHH-----HHHHHH-----TTCCEEEEECCT
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEcCCc-----hHHHHHH-----HHHHHh-----cCCcEEEEEecC
Confidence 5789999999999999999999999986 788888843 1222221 111211 124688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc--cCCceEEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM--KNLKCFTY 171 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~l~~~V~ 171 (543)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... ++ .++|+
T Consensus 81 ~~~~------~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~ 153 (274)
T 1ja9_A 81 SKPS------EVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIIL 153 (274)
T ss_dssp TSHH------HHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEE
Confidence 9875 6766665 79999999997542 1345678999999999999998764 13 69999
Q ss_pred EecCccc-cCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 172 ISTAYCH-PSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 172 vST~y~~-~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
+||..+. .... ....|+.||+..|.+++.++. .++++
T Consensus 154 ~sS~~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v 195 (274)
T 1ja9_A 154 TSSIAAVMTGIP--------------------------------------NHALYAGSKAAVEGFCRAFAVDCGAKGVTV 195 (274)
T ss_dssp ECCGGGTCCSCC--------------------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEE
T ss_pred EcChHhccCCCC--------------------------------------CCchHHHHHHHHHHHHHHHHHHhhhcCeEE
Confidence 9998664 2110 016899999999999887654 48999
Q ss_pred EEEecCeeeecCCCC-----CCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCC
Q psy7538 247 MILRPSIVVPIYKEP-----LPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESE 321 (543)
Q Consensus 247 ~IlRps~V~G~~~~p-----~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~ 321 (543)
.++||+.|.++...+ .++..... .......... ......++++++|+|++++.++..... ..
T Consensus 196 ~~v~Pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---------~~~~~~~~~~~~dva~~i~~l~~~~~~---~~ 262 (274)
T 1ja9_A 196 NCIAPGGVKTDMFDENSWHYAPGGYKGM-PQEKIDEGLA---------NMNPLKRIGYPADIGRAVSALCQEESE---WI 262 (274)
T ss_dssp EEEEECCBSSHHHHHHGGGTSTTCCTTC-CHHHHHHHHH---------HTSTTSSCBCHHHHHHHHHHHHSGGGT---TC
T ss_pred EEEeeCcccccchhcccccccccccccC-chHHHHHHHH---------hcCCCCCccCHHHHHHHHHHHhCcccc---cc
Confidence 999999997764221 00000000 0011111111 122345789999999999988865432 12
Q ss_pred CCcEEEeecC
Q psy7538 322 RKSVCNLTSN 331 (543)
Q Consensus 322 ~~~vyni~s~ 331 (543)
.+++|+++++
T Consensus 263 ~G~~~~v~gG 272 (274)
T 1ja9_A 263 NGQVIKLTGG 272 (274)
T ss_dssp CSCEEEESTT
T ss_pred cCcEEEecCC
Confidence 4789999876
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=2e-19 Score=176.12 Aligned_cols=226 Identities=15% Similarity=0.166 Sum_probs=156.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||+|+||++++++|++.|+. .|+++.|+... +.++++ .... + ..++.++.+|+
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~--~v~~~~r~~~~----~~~~~l---------~~~~-~--~~~~~~~~~D~ 64 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKRNLK--NFVILDRVENP----TALAEL---------KAIN-P--KVNITFHTYDV 64 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCS--EEEEEESSCCH----HHHHHH---------HHHC-T--TSEEEEEECCT
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCc--EEEEEecCchH----HHHHHH---------HHhC-C--CceEEEEEEec
Confidence 57899999999999999999999999862 48888887531 222222 1111 1 24788999999
Q ss_pred CCC-CCCCCHHHHHHHhc-------CccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhc--c-C---CceEEEEe
Q psy7538 108 TQL-KLGISEIDKKELID-------NVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQM--K-N---LKCFTYIS 173 (543)
Q Consensus 108 ~~~-~lgls~~~~~~l~~-------~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~--~-~---l~~~V~vS 173 (543)
+++ + +++.+++ ++|+|||+||... .+.++..+++|+.|+.++++++... + + -.++|++|
T Consensus 65 ~~~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~is 137 (254)
T 1sby_A 65 TVPVA------ESKKLLKKIFDQLKTVDILINGAGILD-DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANIC 137 (254)
T ss_dssp TSCHH------HHHHHHHHHHHHHSCCCEEEECCCCCC-TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEEC
T ss_pred CCChH------HHHHHHHHHHHhcCCCCEEEECCccCC-HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEEC
Confidence 987 4 4555443 7999999999764 4567889999999999999998653 1 1 35799999
Q ss_pred cCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEEE
Q psy7538 174 TAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMIL 249 (543)
Q Consensus 174 T~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~Il 249 (543)
|..+..... ....|+.||+..|.+.+..+. .++++.++
T Consensus 138 S~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v 179 (254)
T 1sby_A 138 SVTGFNAIH--------------------------------------QVPVYSASKAAVVSFTNSLAKLAPITGVTAYSI 179 (254)
T ss_dssp CGGGTSCCT--------------------------------------TSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEE
T ss_pred chhhccCCC--------------------------------------CchHHHHHHHHHHHHHHHHHHHhccCCeEEEEE
Confidence 986643211 016899999999999877654 48999999
Q ss_pred ecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEee
Q psy7538 250 RPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLT 329 (543)
Q Consensus 250 Rps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~ 329 (543)
+|+.|.++.......|.+... ....... ...+.+++|+|++++.++.... .+++|++.
T Consensus 180 ~Pg~v~t~~~~~~~~~~~~~~----~~~~~~~------------~~~~~~~~dvA~~i~~~~~~~~------~G~~~~v~ 237 (254)
T 1sby_A 180 NPGITRTPLVHTFNSWLDVEP----RVAELLL------------SHPTQTSEQCGQNFVKAIEANK------NGAIWKLD 237 (254)
T ss_dssp EECSEESHHHHSCCCGGGSCT----THHHHHT------------TSCCEEHHHHHHHHHHHHHHCC------TTCEEEEE
T ss_pred ecCCccCccccccchhhhhhH----HHHHHHh------------cCCCCCHHHHHHHHHHHHHcCC------CCCEEEEe
Confidence 999998775332222211000 0111111 1123489999999998886332 48899998
Q ss_pred cCCCCcccH
Q psy7538 330 SNKDYKITW 338 (543)
Q Consensus 330 s~~~~~~t~ 338 (543)
++...+++|
T Consensus 238 gG~~~~~~~ 246 (254)
T 1sby_A 238 LGTLEAIEW 246 (254)
T ss_dssp TTEEEECCC
T ss_pred CCceeEecc
Confidence 873334444
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=2e-19 Score=175.07 Aligned_cols=220 Identities=12% Similarity=0.116 Sum_probs=153.4
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||||+||++++++|++.|+ +|+++.|+. ++++++. +.+... ...++.++.+|+
T Consensus 5 ~~~~~vlVtGasggiG~~la~~l~~~G~---~V~~~~r~~------~~~~~~~-----~~~~~~----~~~~~~~~~~D~ 66 (248)
T 2pnf_A 5 LQGKVSLVTGSTRGIGRAIAEKLASAGS---TVIITGTSG------ERAKAVA-----EEIANK----YGVKAHGVEMNL 66 (248)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSH------HHHHHHH-----HHHHHH----HCCCEEEEECCT
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCh------HHHHHHH-----HHHHhh----cCCceEEEEccC
Confidence 5789999999999999999999999986 789999864 2222211 111110 124688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHH----HhccCCceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELS----KQMKNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~l~~~ 169 (543)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+ ++. +.+++
T Consensus 67 ~~~~------~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~i 139 (248)
T 2pnf_A 67 LSEE------SINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQ-RWGRI 139 (248)
T ss_dssp TCHH------HHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHH-TCEEE
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCcEE
Confidence 9875 6776665 79999999997642 2345678999999997776655 333 57899
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+..... + ...|+.||+..|.+.+..+. .+++
T Consensus 140 v~~sS~~~~~~~~---------~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~~i~ 181 (248)
T 2pnf_A 140 VNISSVVGFTGNV---------G-----------------------------QVNYSTTKAGLIGFTKSLAKELAPRNVL 181 (248)
T ss_dssp EEECCHHHHHCCT---------T-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred EEEccHHhcCCCC---------C-----------------------------CchHHHHHHHHHHHHHHHHHHhcccCeE
Confidence 9999985432110 0 16899999999998877654 4899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
+.++||+.|.++..... . .........+ .....+++++|+|++++.++..... ...+++
T Consensus 182 v~~v~Pg~v~t~~~~~~--------~-~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~---~~~G~~ 240 (248)
T 2pnf_A 182 VNAVAPGFIETDMTAVL--------S-EEIKQKYKEQ---------IPLGRFGSPEEVANVVLFLCSELAS---YITGEV 240 (248)
T ss_dssp EEEEEECSBCCGGGGGS--------C-HHHHHHHHHT---------CTTSSCBCHHHHHHHHHHHHSGGGT---TCCSCE
T ss_pred EEEEEeceecCchhhhc--------c-HHHHHHHHhc---------CCCCCccCHHHHHHHHHHHhCchhh---cCCCcE
Confidence 99999999987643211 1 1111111111 1124588999999999988865422 124789
Q ss_pred EEeecC
Q psy7538 326 CNLTSN 331 (543)
Q Consensus 326 yni~s~ 331 (543)
|+++++
T Consensus 241 ~~v~gg 246 (248)
T 2pnf_A 241 IHVNGG 246 (248)
T ss_dssp EEESTT
T ss_pred EEeCCC
Confidence 999876
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.82 E-value=4.2e-19 Score=172.78 Aligned_cols=220 Identities=17% Similarity=0.171 Sum_probs=145.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEE-ecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLL-MRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l-~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
+++|+|+||||+|+||++++++|++.|+ +|+++ .|+.. ..+.+.+ .++ ....++.++.+|
T Consensus 3 l~~~~vlItGasggiG~~~a~~l~~~G~---~V~~~~~r~~~---~~~~~~~--------~~~-----~~~~~~~~~~~D 63 (247)
T 2hq1_A 3 LKGKTAIVTGSSRGLGKAIAWKLGNMGA---NIVLNGSPAST---SLDATAE--------EFK-----AAGINVVVAKGD 63 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEECTTCS---HHHHHHH--------HHH-----HTTCCEEEEESC
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC---EEEEEcCcCHH---HHHHHHH--------HHH-----hcCCcEEEEECC
Confidence 4689999999999999999999999986 78888 44432 1121111 111 112468899999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceE
Q psy7538 107 ITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCF 169 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~ 169 (543)
+++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... .+..++
T Consensus 64 ~~~~~------~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~i 137 (247)
T 2hq1_A 64 VKNPE------DVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKI 137 (247)
T ss_dssp TTSHH------HHHHHHHHHHHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEE
T ss_pred CCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEE
Confidence 99875 6666655 79999999997532 2345678999999999888887642 256899
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+.... | ....|+.||+..|.+.+..+. .+++
T Consensus 138 v~~sS~~~~~~~----------~----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~ 179 (247)
T 2hq1_A 138 INITSIAGIIGN----------A----------------------------GQANYAASKAGLIGFTKSIAKEFAAKGIY 179 (247)
T ss_dssp EEECC-----------------------------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred EEEcChhhccCC----------C----------------------------CCcHhHHHHHHHHHHHHHHHHHHHHcCcE
Confidence 999998543211 0 016899999999999887654 4899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
+.+++|+.|.++..... +.........+ .....+++++|+|++++.++..... ...+++
T Consensus 180 v~~v~Pg~v~t~~~~~~---------~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~---~~~G~~ 238 (247)
T 2hq1_A 180 CNAVAPGIIKTDMTDVL---------PDKVKEMYLNN---------IPLKRFGTPEEVANVVGFLASDDSN---YITGQV 238 (247)
T ss_dssp EEEEEECSBCCHHHHTS---------CHHHHHHHHTT---------STTSSCBCHHHHHHHHHHHHSGGGT---TCCSCE
T ss_pred EEEEEEEEEeccchhhc---------chHHHHHHHhh---------CCCCCCCCHHHHHHHHHHHcCcccc---cccCcE
Confidence 99999998865432110 11122222221 1234588999999999888765432 124789
Q ss_pred EEeecC
Q psy7538 326 CNLTSN 331 (543)
Q Consensus 326 yni~s~ 331 (543)
||++++
T Consensus 239 ~~v~gG 244 (247)
T 2hq1_A 239 INIDGG 244 (247)
T ss_dssp EEESTT
T ss_pred EEeCCC
Confidence 999876
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.4e-18 Score=169.47 Aligned_cols=219 Identities=15% Similarity=0.172 Sum_probs=156.4
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
.+|+++||||+|+||++++++|++.|+ +|+++.|... ++++++. +.++ ....++.++.+|++
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~G~---~V~~~~~~~~-----~~~~~~~-----~~~~-----~~~~~~~~~~~Dv~ 64 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEEGY---NVAVNYAGSK-----EKAEAVV-----EEIK-----AKGVDSFAIQANVA 64 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCH-----HHHHHHH-----HHHH-----HTTSCEEEEECCTT
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCCH-----HHHHHHH-----HHHH-----hcCCcEEEEEccCC
Confidence 579999999999999999999999997 7878777542 2222211 1111 12347889999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHH----HhccCCceEE
Q psy7538 109 QLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELS----KQMKNLKCFT 170 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~l~~~V 170 (543)
+++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++ ++. +..++|
T Consensus 65 d~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~iv 137 (246)
T 3osu_A 65 DAD------EVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQ-RSGAII 137 (246)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEE
Confidence 875 6666665 78999999997632 2446678999999999999998 333 567999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... + ...|+.||+..+.+.+..+. +|+++
T Consensus 138 ~isS~~~~~~~~---------~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v 179 (246)
T 3osu_A 138 NLSSVVGAVGNP---------G-----------------------------QANYVATKAGVIGLTKSAARELASRGITV 179 (246)
T ss_dssp EECCHHHHHCCT---------T-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred EEcchhhcCCCC---------C-----------------------------ChHHHHHHHHHHHHHHHHHHHhcccCeEE
Confidence 999986542211 0 16899999999888876654 58999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
.+++|+.|.++..... . .........+. ....+...+|+|++++.++..... ...|+++
T Consensus 180 n~v~PG~v~t~~~~~~--------~-~~~~~~~~~~~---------p~~r~~~~~dva~~v~~l~s~~~~---~itG~~i 238 (246)
T 3osu_A 180 NAVAPGFIVSDMTDAL--------S-DELKEQMLTQI---------PLARFGQDTDIANTVAFLASDKAK---YITGQTI 238 (246)
T ss_dssp EEEEECSBGGGCCSCS--------C-HHHHHHHHTTC---------TTCSCBCHHHHHHHHHHHTSGGGT---TCCSCEE
T ss_pred EEEEECCCcCCccccc--------C-HHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCcccc---CCCCCEE
Confidence 9999999987754321 1 12333333322 234567889999999988865432 1358899
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
++.++
T Consensus 239 ~vdgG 243 (246)
T 3osu_A 239 HVNGG 243 (246)
T ss_dssp EESTT
T ss_pred EeCCC
Confidence 99876
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.4e-19 Score=180.18 Aligned_cols=244 Identities=15% Similarity=0.183 Sum_probs=169.3
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
-+++|+|+||||+|+||++++++|++.|. +|+++.|+.. ++++. .+.++.. .....++.++.+|
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~------~~~~~-----~~~l~~~--~~~~~~~~~~~~D 71 (281)
T 3svt_A 8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGA---SVMIVGRNPD------KLAGA-----VQELEAL--GANGGAIRYEPTD 71 (281)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHH------HHHHH-----HHHHHTT--CCSSCEEEEEECC
T ss_pred CcCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHH-----HHHHHHh--CCCCceEEEEeCC
Confidence 46789999999999999999999999987 7888888642 22221 1112211 1112378999999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CccEEEEcCccCC----C----cccHHHHHHHHHHHHHHHHHHHHhc---cCCce
Q psy7538 107 ITQLKLGISEIDKKELID-------NVDIVYHVAATIR----F----DEPIKTAVILNTRGTRDMLELSKQM---KNLKC 168 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~ 168 (543)
+++++ +++.+++ ++|++||+||... + .+.++..+++|+.|+.++++++... .+-.+
T Consensus 72 v~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~ 145 (281)
T 3svt_A 72 ITNED------ETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGS 145 (281)
T ss_dssp TTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEE
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcE
Confidence 99875 6666554 6899999999632 1 2345678999999999999988653 13359
Q ss_pred EEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCC
Q psy7538 169 FTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGM 244 (543)
Q Consensus 169 ~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~l 244 (543)
+|++||..+..... ....|+.||+..|.+.+..+. +++
T Consensus 146 iv~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~l~~~la~e~~~~gi 187 (281)
T 3svt_A 146 FVGISSIAASNTHR--------------------------------------WFGAYGVTKSAVDHLMQLAADELGASWV 187 (281)
T ss_dssp EEEECCHHHHSCCT--------------------------------------TCTHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred EEEEeCHHHcCCCC--------------------------------------CChhHHHHHHHHHHHHHHHHHHhhhcCe
Confidence 99999986643211 016899999999999887654 579
Q ss_pred cEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCc
Q psy7538 245 PCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKS 324 (543)
Q Consensus 245 p~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~ 324 (543)
.+.+++|+.|.++...... ...........+ .....+..++|+|++++.++..... -..++
T Consensus 188 ~vn~v~PG~v~t~~~~~~~-------~~~~~~~~~~~~---------~p~~r~~~~~dva~~~~~l~s~~~~---~itG~ 248 (281)
T 3svt_A 188 RVNSIRPGLIRTDLVAAIT-------ESAELSSDYAMC---------TPLPRQGEVEDVANMAMFLLSDAAS---FVTGQ 248 (281)
T ss_dssp EEEEEEECSBCSGGGHHHH-------TCHHHHHHHHHH---------CSSSSCBCHHHHHHHHHHHHSGGGT---TCCSC
T ss_pred EEEEEEeCcCcCcchhhcc-------cCHHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHhCcccC---CCCCC
Confidence 9999999999776432100 001122222211 1223566899999999988765432 13588
Q ss_pred EEEeecCCCCccc-HHHHHHHHhhhhcC
Q psy7538 325 VCNLTSNKDYKIT-WQEICDIGKDIVTS 351 (543)
Q Consensus 325 vyni~s~~~~~~t-~~e~~~~i~~~~G~ 351 (543)
++++.++ ..++ ..++.+.+.+.+|.
T Consensus 249 ~~~vdgG--~~~~~~~~~~~~~~~~~~~ 274 (281)
T 3svt_A 249 VINVDGG--QMLRRGPDFSAMLEPVFGR 274 (281)
T ss_dssp EEEESTT--GGGSCCCCCHHHHHHHHCT
T ss_pred EEEeCCC--hhcccCCcchhccccccCC
Confidence 9999888 5555 77888888888743
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.82 E-value=6.1e-19 Score=172.89 Aligned_cols=225 Identities=14% Similarity=0.112 Sum_probs=153.8
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|+||++++++|++.|+ +|+++.|+.. ++..+++ .....++.++.+|+
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~---~V~~~~r~~~----~~~~~~l--------------~~~~~~~~~~~~D~ 60 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLARAGA---NIVLNGFGDP----APALAEI--------------ARHGVKAVHHPADL 60 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEECSSCC----HHHHHHH--------------HTTSCCEEEECCCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCch----HHHHHHH--------------HhcCCceEEEeCCC
Confidence 4689999999999999999999999987 7888888764 2222222 11124688899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHH----HhccCCceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELS----KQMKNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~l~~~ 169 (543)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++.+.+ ++. +..++
T Consensus 61 ~~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~g~i 133 (255)
T 2q2v_A 61 SDVA------QIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRAR-NWGRI 133 (255)
T ss_dssp TSHH------HHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEE
Confidence 9875 6777766 79999999996542 2446678999999877776665 443 56899
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+..... ....|+.||+..+.+.+..+. .+++
T Consensus 134 v~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~ 175 (255)
T 2q2v_A 134 INIASVHGLVGST--------------------------------------GKAAYVAAKHGVVGLTKVVGLETATSNVT 175 (255)
T ss_dssp EEECCGGGTSCCT--------------------------------------TBHHHHHHHHHHHHHHHHHHHHTTTSSEE
T ss_pred EEEcCchhccCCC--------------------------------------CchhHHHHHHHHHHHHHHHHHHhcccCcE
Confidence 9999986643211 016899999999999887654 4799
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCc---eeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCC
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGV---IRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~---~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~ 322 (543)
+.++||+.|.++..... ..-........ ...+.........+++++|+|++++.++..... ...
T Consensus 176 v~~v~Pg~v~t~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~---~~t 242 (255)
T 2q2v_A 176 CNAICPGWVLTPLVQKQ----------IDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSEAGS---QVR 242 (255)
T ss_dssp EEEEEESSBCCHHHHHH----------HHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHHHHHHHHHTSGGGT---TCC
T ss_pred EEEEeeCCCcCcchhhh----------cccccccccchHHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCccC---CCC
Confidence 99999999877632100 00000000000 000001122334689999999999988765432 124
Q ss_pred CcEEEeecC
Q psy7538 323 KSVCNLTSN 331 (543)
Q Consensus 323 ~~vyni~s~ 331 (543)
+++|++.++
T Consensus 243 G~~~~vdgG 251 (255)
T 2q2v_A 243 GAAWNVDGG 251 (255)
T ss_dssp SCEEEESTT
T ss_pred CCEEEECCC
Confidence 789999876
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=5.8e-19 Score=173.21 Aligned_cols=219 Identities=11% Similarity=0.116 Sum_probs=150.9
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|+||++++++|++.|+ +|+++.|+... +.+.+ +. . + .++.+|+
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~----~~~~~------------~~-~----~-~~~~~D~ 58 (256)
T 2d1y_A 4 FAGKGVLVTGGARGIGRAIAQAFAREGA---LVALCDLRPEG----KEVAE------------AI-G----G-AFFQVDL 58 (256)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSTTH----HHHHH------------HH-T----C-EEEECCT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCChhH----HHHHH------------Hh-h----C-CEEEeeC
Confidence 5789999999999999999999999986 78999997532 11111 00 1 3 6889999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... .+..++|
T Consensus 59 ~~~~------~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv 132 (256)
T 2d1y_A 59 EDER------ERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIV 132 (256)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 9875 5665554 68999999997542 2345678999999999999987542 2568999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... + ...|+.||+..|.+.+..+. .++++
T Consensus 133 ~isS~~~~~~~~---------~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v 174 (256)
T 2d1y_A 133 NVASVQGLFAEQ---------E-----------------------------NAAYNASKGGLVNLTRSLALDLAPLRIRV 174 (256)
T ss_dssp EECCGGGTSBCT---------T-----------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred EEccccccCCCC---------C-----------------------------ChhHHHHHHHHHHHHHHHHHHHhhcCeEE
Confidence 999986542210 0 16899999999999887654 48999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHH-HhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIG-AGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~-~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
.+++|+.|.++... ..+.. ..................+++++|+|++++.++..... ...+++
T Consensus 175 ~~v~Pg~v~t~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~s~~~~---~~~G~~ 238 (256)
T 2d1y_A 175 NAVAPGAIATEAVL-------------EAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKAS---FITGAI 238 (256)
T ss_dssp EEEEECSBCCHHHH-------------HHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGT---TCCSCE
T ss_pred EEEeeCCccCchhh-------------hccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhc---CCCCCE
Confidence 99999988654210 00000 00000000011222335689999999999988865432 125789
Q ss_pred EEeecC
Q psy7538 326 CNLTSN 331 (543)
Q Consensus 326 yni~s~ 331 (543)
+++.++
T Consensus 239 ~~v~gG 244 (256)
T 2d1y_A 239 LPVDGG 244 (256)
T ss_dssp EEESTT
T ss_pred EEECCC
Confidence 999887
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=6e-19 Score=172.44 Aligned_cols=220 Identities=13% Similarity=0.111 Sum_probs=152.6
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCce-EEEEcc
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKI-QVISGD 106 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v-~~i~gD 106 (543)
+++|+|+||||||+||++++++|++.|+ +|+++.|+. ++++++. +.+ ..++ .++.+|
T Consensus 9 ~~~k~vlITGasggiG~~la~~l~~~G~---~V~~~~r~~------~~~~~~~-----~~~--------~~~~~~~~~~D 66 (254)
T 2wsb_A 9 LDGACAAVTGAGSGIGLEICRAFAASGA---RLILIDREA------AALDRAA-----QEL--------GAAVAARIVAD 66 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH-----HHH--------GGGEEEEEECC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHH-----HHh--------cccceeEEEEe
Confidence 5789999999999999999999999986 789999864 2222211 111 1245 789999
Q ss_pred CCCCCCCCCHHHHHHHh------cCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHH----hccCCceE
Q psy7538 107 ITQLKLGISEIDKKELI------DNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSK----QMKNLKCF 169 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~------~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~----~~~~l~~~ 169 (543)
+++++ +++.++ .++|+|||+||.... .+.++..+++|+.|+.++++++. +. +.+++
T Consensus 67 ~~~~~------~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~i 139 (254)
T 2wsb_A 67 VTDAE------AMTAAAAEAEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVAR-GAGAI 139 (254)
T ss_dssp TTCHH------HHHHHHHHHHHHSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEE
T ss_pred cCCHH------HHHHHHHHHHhhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEE
Confidence 99875 566554 479999999997543 23456789999999877777653 33 57899
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+..... .. ..+.|+.||+..|.+++..+. .+++
T Consensus 140 v~isS~~~~~~~~----------~~--------------------------~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~ 183 (254)
T 2wsb_A 140 VNLGSMSGTIVNR----------PQ--------------------------FASSYMASKGAVHQLTRALAAEWAGRGVR 183 (254)
T ss_dssp EEECCGGGTSCCS----------SS--------------------------CBHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred EEEecchhccCCC----------CC--------------------------cchHHHHHHHHHHHHHHHHHHHHhhcCeE
Confidence 9999986643211 00 016899999999999887654 4899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
++++||+.|+++.....+. .+ ......... .....+++++|+|++++.++..... ...+++
T Consensus 184 v~~v~Pg~v~t~~~~~~~~------~~-~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~---~~~G~~ 244 (254)
T 2wsb_A 184 VNALAPGYVATEMTLKMRE------RP-ELFETWLDM---------TPMGRCGEPSEIAAAALFLASPAAS---YVTGAI 244 (254)
T ss_dssp EEEEEECCBCSHHHHHHHT------CH-HHHHHHHHT---------STTSSCBCHHHHHHHHHHHHSGGGT---TCCSCE
T ss_pred EEEEEecccCchhhhcccc------Ch-HHHHHHHhc---------CCCCCCCCHHHHHHHHHHHhCcccc---cccCCE
Confidence 9999999998864321100 01 122222221 1224578999999999988765432 125789
Q ss_pred EEeecC
Q psy7538 326 CNLTSN 331 (543)
Q Consensus 326 yni~s~ 331 (543)
+++.++
T Consensus 245 ~~v~gG 250 (254)
T 2wsb_A 245 LAVDGG 250 (254)
T ss_dssp EEESTT
T ss_pred EEECCC
Confidence 999876
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.81 E-value=5.1e-19 Score=171.87 Aligned_cols=219 Identities=12% Similarity=0.115 Sum_probs=151.2
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEE-ecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLL-MRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l-~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
||+|+||||||+||++++++|++.|+ +|+++ .|+. ++++++. +.++. ...++.++.+|++
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~---~v~~~~~r~~------~~~~~~~-----~~~~~-----~~~~~~~~~~D~~ 61 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGC---KVLVNYARSA------KAAEEVS-----KQIEA-----YGGQAITFGGDVS 61 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCH------HHHHHHH-----HHHHH-----HTCEEEEEECCTT
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEcCCCH------HHHHHHH-----HHHHh-----cCCcEEEEeCCCC
Confidence 58999999999999999999999987 77774 5653 2222211 11111 1246889999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEEE
Q psy7538 109 QLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFTY 171 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~ 171 (543)
+++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... .+..++|+
T Consensus 62 ~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~ 135 (244)
T 1edo_A 62 KEA------DVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIIN 135 (244)
T ss_dssp SHH------HHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 875 6776665 68999999997642 2445678999999999999988653 25689999
Q ss_pred EecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEE
Q psy7538 172 ISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCM 247 (543)
Q Consensus 172 vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~ 247 (543)
+||..+..... + ...|+.||+..|.+.+..+. .++++.
T Consensus 136 ~sS~~~~~~~~---------~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~ 177 (244)
T 1edo_A 136 IASVVGLIGNI---------G-----------------------------QANYAAAKAGVIGFSKTAAREGASRNINVN 177 (244)
T ss_dssp ECCTHHHHCCT---------T-----------------------------CHHHHHHHHHHHHHHHHHHHHHHTTTEEEE
T ss_pred ECChhhcCCCC---------C-----------------------------CccchhhHHHHHHHHHHHHHHhhhcCCEEE
Confidence 99985532210 0 16899999999988877654 489999
Q ss_pred EEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEE
Q psy7538 248 ILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCN 327 (543)
Q Consensus 248 IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyn 327 (543)
++||+.|.++.... ..+ ......... .....+++++|+|++++.++..+.. ....+++|+
T Consensus 178 ~v~Pg~v~t~~~~~--------~~~-~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~--~~~~G~~~~ 237 (244)
T 1edo_A 178 VVCPGFIASDMTAK--------LGE-DMEKKILGT---------IPLGRTGQPENVAGLVEFLALSPAA--SYITGQAFT 237 (244)
T ss_dssp EEEECSBCSHHHHT--------TCH-HHHHHHHTS---------CTTCSCBCHHHHHHHHHHHHHCSGG--GGCCSCEEE
T ss_pred EEeeCccccchhhh--------cCh-HHHHHHhhc---------CCCCCCCCHHHHHHHHHHHhCCCcc--CCcCCCEEE
Confidence 99999997764321 111 121222111 1123578999999999988743321 012478999
Q ss_pred eecC
Q psy7538 328 LTSN 331 (543)
Q Consensus 328 i~s~ 331 (543)
+.++
T Consensus 238 v~gG 241 (244)
T 1edo_A 238 IDGG 241 (244)
T ss_dssp ESTT
T ss_pred eCCC
Confidence 9876
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=3.9e-19 Score=175.03 Aligned_cols=231 Identities=13% Similarity=0.078 Sum_probs=156.7
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|+||++++++|++.|+ +|+++.|+. ++++++. +.+.... ..++.++.+|+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~------~~~~~~~-----~~l~~~~----~~~~~~~~~D~ 66 (263)
T 3ai3_A 5 ISGKVAVITGSSSGIGLAIAEGFAKEGA---HIVLVARQV------DRLHEAA-----RSLKEKF----GVRVLEVAVDV 66 (263)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH-----HHHHHHH----CCCEEEEECCT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEcCCH------HHHHHHH-----HHHHHhc----CCceEEEEcCC
Confidence 5789999999999999999999999986 788999864 2222211 1121110 24688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... .+..++|
T Consensus 67 ~~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv 140 (263)
T 3ai3_A 67 ATPE------GVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAII 140 (263)
T ss_dssp TSHH------HHHHHHHHHHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEE
Confidence 9875 6666665 79999999997532 2446678999999999998887531 2568999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... ....|+.||+..|.+.+..+. +|+++
T Consensus 141 ~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v 182 (263)
T 3ai3_A 141 HNASICAVQPLW--------------------------------------YEPIYNVTKAALMMFSKTLATEVIKDNIRV 182 (263)
T ss_dssp EECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred EECchhhcCCCC--------------------------------------CcchHHHHHHHHHHHHHHHHHHhhhcCcEE
Confidence 999987654211 016899999999999877654 58999
Q ss_pred EEEecCeeeecCCCCC-CCCCCCCCc-hHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCc
Q psy7538 247 MILRPSIVVPIYKEPL-PGWTDNING-PTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKS 324 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~-~gw~d~~~g-~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~ 324 (543)
.++||+.|+++..... +.+...... ..........+ ......+++++|+|++++.++..... ...++
T Consensus 183 ~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~p~~~~~~~~dvA~~~~~l~s~~~~---~~~G~ 251 (263)
T 3ai3_A 183 NCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADE--------HAPIKRFASPEELANFFVFLCSERAT---YSVGS 251 (263)
T ss_dssp EEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHH--------HCTTCSCBCHHHHHHHHHHHTSTTCT---TCCSC
T ss_pred EEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhc--------CCCCCCCcCHHHHHHHHHHHcCcccc---CCCCc
Confidence 9999999988642210 000000000 01111111111 01224688999999999988865432 12478
Q ss_pred EEEeecC
Q psy7538 325 VCNLTSN 331 (543)
Q Consensus 325 vyni~s~ 331 (543)
+|++.++
T Consensus 252 ~~~vdgG 258 (263)
T 3ai3_A 252 AYFVDGG 258 (263)
T ss_dssp EEEESTT
T ss_pred EEEECCC
Confidence 9999887
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.3e-18 Score=170.74 Aligned_cols=215 Identities=13% Similarity=0.122 Sum_probs=149.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||+|+||++++++|++.|. +|+++.|+..... ... .....++.++.+|+
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~~~---~~~----------------~~~~~~~~~~~~Dv 62 (257)
T 3tpc_A 5 LKSRVFIVTGASSGLGAAVTRMLAQEGA---TVLGLDLKPPAGE---EPA----------------AELGAAVRFRNADV 62 (257)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESSCC-------------------------------CEEEECCT
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCChHHHH---HHH----------------HHhCCceEEEEccC
Confidence 5789999999999999999999999987 7899999864321 110 11124678999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-----------cccHHHHHHHHHHHHHHHHHHHHhc------
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-----------DEPIKTAVILNTRGTRDMLELSKQM------ 163 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-----------~~~~~~~~~~Nv~gt~~ll~~a~~~------ 163 (543)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 63 ~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~ 136 (257)
T 3tpc_A 63 TNEA------DATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEP 136 (257)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCC
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccc
Confidence 9875 6666665 79999999997632 2456678999999999999998763
Q ss_pred ---cCCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHh
Q psy7538 164 ---KNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECM 240 (543)
Q Consensus 164 ---~~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~ 240 (543)
++-.++|++||..+..... ....|+.||+..+.+.+..+
T Consensus 137 ~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~~~~~la 178 (257)
T 3tpc_A 137 DADGERGVIVNTASIAAFDGQI--------------------------------------GQAAYAASKGGVAALTLPAA 178 (257)
T ss_dssp CTTSCCEEEEEECCTHHHHCCT--------------------------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCeEEEEEechhhccCCC--------------------------------------CCcchHHHHHHHHHHHHHHH
Confidence 1346799999986643211 01689999999998887655
Q ss_pred h----cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcc-cccchHHHHHHHHHHHhhhhc
Q psy7538 241 E----LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGM-ADFLPADVAINGVFLFTWDFL 315 (543)
Q Consensus 241 ~----~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~-~d~V~vddva~a~i~a~~~~~ 315 (543)
. +|+++.+++|+.|.++.....+. ....... ..... ..+..++|+|++++.++....
T Consensus 179 ~e~~~~gi~vn~v~PG~v~t~~~~~~~~---------~~~~~~~---------~~~p~~~r~~~~~dva~~v~~l~s~~~ 240 (257)
T 3tpc_A 179 RELARFGIRVVTIAPGIFDTPMMAGMPQ---------DVQDALA---------ASVPFPPRLGRAEEYAALVKHICENTM 240 (257)
T ss_dssp HHHGGGTEEEEEEEECCBSCC--------------------------------CCSSSSCSCBCHHHHHHHHHHHHHCTT
T ss_pred HHHHHcCeEEEEEEeCCCCChhhccCCH---------HHHHHHH---------hcCCCCCCCCCHHHHHHHHHHHcccCC
Confidence 4 58999999999997764321110 0111111 11111 357889999999998886533
Q ss_pred ccCCCCCCcEEEeecC
Q psy7538 316 NSKESERKSVCNLTSN 331 (543)
Q Consensus 316 ~~~~~~~~~vyni~s~ 331 (543)
. .|+++++.++
T Consensus 241 i-----tG~~i~vdGG 251 (257)
T 3tpc_A 241 L-----NGEVIRLDGA 251 (257)
T ss_dssp C-----CSCEEEESTT
T ss_pred c-----CCcEEEECCC
Confidence 2 5889999887
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.4e-18 Score=171.06 Aligned_cols=226 Identities=12% Similarity=0.089 Sum_probs=154.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||+|+||++++++|++.|+ +|+++.|+. +++++.. .....++.++.+|+
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~------~~~~~~~-------------~~~~~~~~~~~~D~ 67 (263)
T 3ak4_A 10 LSGRKAIVTGGSKGIGAAIARALDKAGA---TVAIADLDV------MAAQAVV-------------AGLENGGFAVEVDV 67 (263)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH-------------HTCTTCCEEEECCT
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHH-------------HHHhcCCeEEEEeC
Confidence 5789999999999999999999999987 788998864 2232221 11112678899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cC-CceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KN-LKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~-l~~~ 169 (543)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... .+ ..++
T Consensus 68 ~d~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~i 141 (263)
T 3ak4_A 68 TKRA------SVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVI 141 (263)
T ss_dssp TCHH------HHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEE
Confidence 9875 6776665 79999999997542 1346678999999999999888642 13 5799
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+..... ....|+.||+..|.+.+..+. .|++
T Consensus 142 v~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~ 183 (263)
T 3ak4_A 142 VNTASLAAKVGAP--------------------------------------LLAHYSASKFAVFGWTQALAREMAPKNIR 183 (263)
T ss_dssp EEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred EEecccccccCCC--------------------------------------CchhHHHHHHHHHHHHHHHHHHHhHcCeE
Confidence 9999986543210 016899999999998877654 4899
Q ss_pred EEEEecCeeeecCCCCCCCCC--CCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCC
Q psy7538 246 CMILRPSIVVPIYKEPLPGWT--DNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERK 323 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~--d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~ 323 (543)
+.++||+.|.++.......|. +.-............ ......+++++|+|++++.++..... ...+
T Consensus 184 v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~p~~~~~~~~dvA~~v~~l~s~~~~---~~tG 251 (263)
T 3ak4_A 184 VNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVS---------LTPLGRIEEPEDVADVVVFLASDAAR---FMTG 251 (263)
T ss_dssp EEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHH---------TCTTCSCBCHHHHHHHHHHHHSGGGT---TCCS
T ss_pred EEEEecccccChhhhhhccccccccccCcHHHHHHHHh---------cCCCCCCcCHHHHHHHHHHHhCcccc---CCCC
Confidence 999999988765321100000 000000011111111 11234588999999999988865432 1257
Q ss_pred cEEEeecC
Q psy7538 324 SVCNLTSN 331 (543)
Q Consensus 324 ~vyni~s~ 331 (543)
+++++.++
T Consensus 252 ~~~~vdgG 259 (263)
T 3ak4_A 252 QGINVTGG 259 (263)
T ss_dssp CEEEESSS
T ss_pred CEEEECcC
Confidence 89999877
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=2.1e-18 Score=169.71 Aligned_cols=211 Identities=15% Similarity=0.134 Sum_probs=151.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||||+||++++++|++.|+ +|+++.|.. ++++++.+ ....++.++.+|+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~------~~~~~~~~-------------~~~~~~~~~~~D~ 62 (260)
T 1nff_A 5 LTGKVALVSGGARGMGASHVRAMVAEGA---KVVFGDILD------EEGKAMAA-------------ELADAARYVHLDV 62 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHHH-------------HTGGGEEEEECCT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHHH-------------HhhcCceEEEecC
Confidence 5789999999999999999999999987 788888864 22222110 0112478899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHH----HhccCCceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELS----KQMKNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~l~~~ 169 (543)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++.+.+ ++. +..++
T Consensus 63 ~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~i 135 (260)
T 1nff_A 63 TQPA------QWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA-GRGSI 135 (260)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEE
Confidence 9875 6777666 79999999997542 2346678999999997666554 343 56899
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+..... + ...|+.||+..|.+.+..+. .|++
T Consensus 136 v~isS~~~~~~~~---------~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~ 177 (260)
T 1nff_A 136 INISSIEGLAGTV---------A-----------------------------CHGYTATKFAVRGLTKSTALELGPSGIR 177 (260)
T ss_dssp EEECCGGGTSCCT---------T-----------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred EEEeehhhcCCCC---------C-----------------------------chhHHHHHHHHHHHHHHHHHHhCccCcE
Confidence 9999986643211 0 15899999999999877654 5899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
+.++||+.|+++... +.. . ... ......+++++|+|++++.++..... ...+++
T Consensus 178 v~~v~Pg~v~t~~~~----~~~----~----------~~~-----~~~~~~~~~~~dvA~~v~~l~s~~~~---~~~G~~ 231 (260)
T 1nff_A 178 VNSIHPGLVKTPMTD----WVP----E----------DIF-----QTALGRAAEPVEVSNLVVYLASDESS---YSTGAE 231 (260)
T ss_dssp EEEEEECCBCSGGGT----TSC----T----------TCS-----CCSSSSCBCHHHHHHHHHHHHSGGGT---TCCSCE
T ss_pred EEEEEeCCCCCCccc----cch----h----------hHH-----hCccCCCCCHHHHHHHHHHHhCcccc---CCcCCE
Confidence 999999999887432 100 0 000 01123578899999999988765432 124789
Q ss_pred EEeecC
Q psy7538 326 CNLTSN 331 (543)
Q Consensus 326 yni~s~ 331 (543)
|++.++
T Consensus 232 ~~v~gG 237 (260)
T 1nff_A 232 FVVDGG 237 (260)
T ss_dssp EEESTT
T ss_pred EEECCC
Confidence 999887
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.2e-18 Score=171.12 Aligned_cols=223 Identities=13% Similarity=0.050 Sum_probs=153.6
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||||+||++++++|++.|+ +|+++.|+. .++++++ .+.++. ...++.++.+|+
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G~---~V~~~~r~~-----~~~~~~~-----~~~l~~-----~~~~~~~~~~D~ 66 (261)
T 1gee_A 5 LEGKVVVITGSSTGLGKSMAIRFATEKA---KVVVNYRSK-----EDEANSV-----LEEIKK-----VGGEAIAVKGDV 66 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSC-----HHHHHHH-----HHHHHH-----TTCEEEEEECCT
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEcCCC-----hHHHHHH-----HHHHHh-----cCCceEEEECCC
Confidence 5789999999999999999999999986 788999832 1222221 111211 124688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cC-CceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KN-LKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~-l~~~ 169 (543)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... .+ ..++
T Consensus 67 ~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~i 140 (261)
T 1gee_A 67 TVES------DVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTV 140 (261)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEE
Confidence 9875 6666655 79999999997543 2345678999999999988887543 13 5799
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+.... ++ ...|+.||+..|.+.+..+. .+++
T Consensus 141 v~isS~~~~~~~---------~~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~ 182 (261)
T 1gee_A 141 INMSSVHEKIPW---------PL-----------------------------FVHYAASKGGMKLMTETLALEYAPKGIR 182 (261)
T ss_dssp EEECCGGGTSCC---------TT-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred EEeCCHHhcCCC---------CC-----------------------------ccHHHHHHHHHHHHHHHHHHHhcccCeE
Confidence 999998654221 01 16899999998888876554 4899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
++++||+.|+++..... .........+... .....+++++|+|++++.++..... ...+++
T Consensus 183 v~~v~Pg~v~t~~~~~~-------~~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~---~~~G~~ 243 (261)
T 1gee_A 183 VNNIGPGAINTPINAEK-------FADPEQRADVESM---------IPMGYIGEPEEIAAVAAWLASSEAS---YVTGIT 243 (261)
T ss_dssp EEEEEECSBCSGGGHHH-------HHSHHHHHHHHTT---------CTTSSCBCHHHHHHHHHHHHSGGGT---TCCSCE
T ss_pred EEEEeeCCcCCchhhhc-------ccChhHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCcccc---CCCCcE
Confidence 99999999988643110 0000111111111 1123578999999999988764322 125789
Q ss_pred EEeecC
Q psy7538 326 CNLTSN 331 (543)
Q Consensus 326 yni~s~ 331 (543)
+++.++
T Consensus 244 ~~v~gg 249 (261)
T 1gee_A 244 LFADGG 249 (261)
T ss_dssp EEESTT
T ss_pred EEEcCC
Confidence 999887
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1e-18 Score=171.82 Aligned_cols=223 Identities=13% Similarity=0.160 Sum_probs=154.8
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+|+||||+|+||++++++|++.|+ +|+++.|+. +++++. .+.++. ...++.++.+|+
T Consensus 7 l~~k~vlVTGas~giG~~ia~~l~~~G~---~V~~~~r~~------~~~~~~-----~~~~~~-----~~~~~~~~~~D~ 67 (260)
T 2ae2_A 7 LEGCTALVTGGSRGIGYGIVEELASLGA---SVYTCSRNQ------KELNDC-----LTQWRS-----KGFKVEASVCDL 67 (260)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHH-----HHHHHH-----TTCEEEEEECCT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHH-----HHHHHh-----cCCcEEEEEcCC
Confidence 5789999999999999999999999986 788998864 222221 111211 124688999999
Q ss_pred CCCCCCCCHHHHHHHh--------cCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceE
Q psy7538 108 TQLKLGISEIDKKELI--------DNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~--------~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~ 169 (543)
++++ +++.++ .++|++||+||.... .+.++..+++|+.|+.++++++... .+..++
T Consensus 68 ~~~~------~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~i 141 (260)
T 2ae2_A 68 SSRS------ERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNV 141 (260)
T ss_dssp TCHH------HHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEE
Confidence 9875 666665 469999999997532 2346678999999999999988431 256899
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+..... ....|+.||+..|.+.+..+. .+++
T Consensus 142 v~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~ 183 (260)
T 2ae2_A 142 VFISSVSGALAVP--------------------------------------YEAVYGATKGAMDQLTRCLAFEWAKDNIR 183 (260)
T ss_dssp EEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEE
T ss_pred EEEcchhhccCCC--------------------------------------CcchHHHHHHHHHHHHHHHHHHHhhcCcE
Confidence 9999986543210 016899999999999987654 4899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchH--HHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCC
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPT--GLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERK 323 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~--~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~ 323 (543)
+.+++|+.|.++.... +. ..+. ..+..... ......+++++|+|++++.++..... ...+
T Consensus 184 v~~v~Pg~v~t~~~~~---~~---~~~~~~~~~~~~~~---------~~~~~~~~~~~dvA~~v~~l~s~~~~---~~tG 245 (260)
T 2ae2_A 184 VNGVGPGVIATSLVEM---TI---QDPEQKENLNKLID---------RCALRRMGEPKELAAMVAFLCFPAAS---YVTG 245 (260)
T ss_dssp EEEEEECSBCSHHHHH---HT---TSHHHHHHHHHHHH---------TSTTCSCBCHHHHHHHHHHHHSGGGT---TCCS
T ss_pred EEEEecCCCCCcchhh---hc---cChhhHHHHHHHHh---------cCCCCCCCCHHHHHHHHHHHcCcccc---CCCC
Confidence 9999999886653110 00 0010 00111111 11234588999999999888765432 1358
Q ss_pred cEEEeecC
Q psy7538 324 SVCNLTSN 331 (543)
Q Consensus 324 ~vyni~s~ 331 (543)
+++++.++
T Consensus 246 ~~~~vdgG 253 (260)
T 2ae2_A 246 QIIYVDGG 253 (260)
T ss_dssp CEEEESTT
T ss_pred CEEEECCC
Confidence 89999877
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.7e-18 Score=172.15 Aligned_cols=237 Identities=13% Similarity=0.149 Sum_probs=160.5
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCC------CHHHHHHHHhcCchhHHHHhhcCcCCCCceE
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGK------TPNQRVEELFESPVFDALKTLRGKSILQKIQ 101 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~------~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~ 101 (543)
++||+++||||+|+||++++++|++.|. +|+++.|+.... ...+++++.. +.+. ....++.
T Consensus 8 l~~k~~lVTGas~gIG~a~a~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~-----~~~~-----~~~~~~~ 74 (281)
T 3s55_A 8 FEGKTALITGGARGMGRSHAVALAEAGA---DIAICDRCENSDVVGYPLATADDLAETV-----ALVE-----KTGRRCI 74 (281)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSCCTTCSSCCCCHHHHHHHH-----HHHH-----HTTCCEE
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC---eEEEEeCCccccccccccccHHHHHHHH-----HHHH-----hcCCeEE
Confidence 6789999999999999999999999997 789999974321 1123333221 1111 1235789
Q ss_pred EEEccCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---c
Q psy7538 102 VISGDITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---K 164 (543)
Q Consensus 102 ~i~gDl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 164 (543)
++.+|+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .
T Consensus 75 ~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 148 (281)
T 3s55_A 75 SAKVDVKDRA------ALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKR 148 (281)
T ss_dssp EEECCTTCHH------HHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 9999999875 6666655 79999999997542 2456778999999999999987431 2
Q ss_pred CCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh---
Q psy7538 165 NLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME--- 241 (543)
Q Consensus 165 ~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~--- 241 (543)
+..++|++||..+..... ....|+.||+..+.+.+..+.
T Consensus 149 ~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~~~~~la~e~~ 190 (281)
T 3s55_A 149 NYGRIVTVSSMLGHSANF--------------------------------------AQASYVSSKWGVIGLTKCAAHDLV 190 (281)
T ss_dssp TCEEEEEECCGGGGSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHTG
T ss_pred CCCEEEEECChhhcCCCC--------------------------------------CCchhHHHHHHHHHHHHHHHHHHh
Confidence 457999999986653211 016899999999999887655
Q ss_pred -cCCcEEEEecCeeeecCCCCCC---CCCCCCCch-HHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcc
Q psy7538 242 -LGMPCMILRPSIVVPIYKEPLP---GWTDNINGP-TGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLN 316 (543)
Q Consensus 242 -~~lp~~IlRps~V~G~~~~p~~---gw~d~~~g~-~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~ 316 (543)
+|+++.+++|+.|.++...+.. .+......+ ..-.... +.........+.+++|+|++++.++.....
T Consensus 191 ~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~ 263 (281)
T 3s55_A 191 GYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESV-------FASLHLQYAPFLKPEEVTRAVLFLVDEASS 263 (281)
T ss_dssp GGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHH-------HHHHCSSSCSCBCHHHHHHHHHHHHSGGGT
T ss_pred hcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHH-------HHhhhccCcCCCCHHHHHHHHHHHcCCccc
Confidence 5899999999999887543200 000000000 0000000 001122236789999999999988866542
Q ss_pred cCCCCCCcEEEeecC
Q psy7538 317 SKESERKSVCNLTSN 331 (543)
Q Consensus 317 ~~~~~~~~vyni~s~ 331 (543)
...|+++++.+|
T Consensus 264 ---~itG~~i~vdgG 275 (281)
T 3s55_A 264 ---HITGTVLPIDAG 275 (281)
T ss_dssp ---TCCSCEEEESTT
T ss_pred ---CCCCCEEEECCC
Confidence 135889999987
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.81 E-value=8e-19 Score=170.53 Aligned_cols=217 Identities=12% Similarity=0.131 Sum_probs=147.3
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEE-ecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEE-EEccC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLL-MRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQV-ISGDI 107 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l-~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~-i~gDl 107 (543)
+|+|+||||||+||++++++|++.|+ +|+++ .|+. ++++++ .+.++. ...++.. +.+|+
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~---~v~~~~~r~~------~~~~~~-----~~~~~~-----~~~~~~~~~~~D~ 61 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGF---ALAIHYGQNR------EKAEEV-----AEEARR-----RGSPLVAVLGANL 61 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTC---EEEEEESSCH------HHHHHH-----HHHHHH-----TTCSCEEEEECCT
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEcCCCH------HHHHHH-----HHHHHh-----cCCceEEEEeccC
Confidence 57999999999999999999999986 77777 6653 222221 111111 1134556 89999
Q ss_pred CCCCCCCCHHHHHHHh-------cCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHH----HHHhccCCceE
Q psy7538 108 TQLKLGISEIDKKELI-------DNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLE----LSKQMKNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~----~a~~~~~l~~~ 169 (543)
++++ +++.++ .++|+|||+||.... .+.++..+++|+.|+.++++ .+++. +.+++
T Consensus 62 ~~~~------~~~~~~~~~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~i 134 (245)
T 2ph3_A 62 LEAE------AATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKA-RFGRI 134 (245)
T ss_dssp TSHH------HHHHHHHHHHHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEE
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhc-CCCEE
Confidence 9875 566554 379999999997542 23456789999999555554 44444 67899
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+..... + ...|+.||+..|.+.+..+. .+++
T Consensus 135 v~~sS~~~~~~~~---------~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~ 176 (245)
T 2ph3_A 135 VNITSVVGILGNP---------G-----------------------------QANYVASKAGLIGFTRAVAKEYAQRGIT 176 (245)
T ss_dssp EEECCTHHHHCCS---------S-----------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred EEEeChhhccCCC---------C-----------------------------CcchHHHHHHHHHHHHHHHHHHHHcCeE
Confidence 9999985532211 0 16899999999988877654 4899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
++++||+.|+++..... +.........+. ....+++++|+|++++.++..... ...+++
T Consensus 177 v~~v~Pg~v~t~~~~~~---------~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~~~---~~~G~~ 235 (245)
T 2ph3_A 177 VNAVAPGFIETEMTERL---------PQEVKEAYLKQI---------PAGRFGRPEEVAEAVAFLVSEKAG---YITGQT 235 (245)
T ss_dssp EEEEEECSBCCHHHHTS---------CHHHHHHHHHTC---------TTCSCBCHHHHHHHHHHHTSGGGT---TCCSCE
T ss_pred EEEEEEEeecCcchhhc---------CHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCcccc---cccCCE
Confidence 99999999987643211 111222222211 124578999999999988865432 124789
Q ss_pred EEeecC
Q psy7538 326 CNLTSN 331 (543)
Q Consensus 326 yni~s~ 331 (543)
|+++++
T Consensus 236 ~~v~gg 241 (245)
T 2ph3_A 236 LCVDGG 241 (245)
T ss_dssp EEESTT
T ss_pred EEECCC
Confidence 999876
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.1e-18 Score=171.33 Aligned_cols=221 Identities=11% Similarity=0.078 Sum_probs=156.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||+|+||++++++|++.|. +|+++.|+.. +++++. +.++ ....++.++.+|+
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~------~~~~~~-----~~~~-----~~~~~~~~~~~Dv 70 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGRAIAGTFAKAGA---SVVVTDLKSE------GAEAVA-----AAIR-----QAGGKAIGLECNV 70 (256)
T ss_dssp CTTCEEEECSCSSHHHHHHHHHHHHHTC---EEEEEESSHH------HHHHHH-----HHHH-----HTTCCEEEEECCT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHH-----HHHH-----hcCCcEEEEECCC
Confidence 5789999999999999999999999997 7888888642 222211 1111 1235788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFTY 171 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~ 171 (543)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .+-.++|+
T Consensus 71 ~d~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~ 144 (256)
T 3gaf_A 71 TDEQ------HREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILN 144 (256)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 9875 6666654 79999999997542 2446678999999999999987431 24579999
Q ss_pred EecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEE
Q psy7538 172 ISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCM 247 (543)
Q Consensus 172 vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~ 247 (543)
+||..+..... ....|+.||+..+.+.+..+. .++.+.
T Consensus 145 isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn 186 (256)
T 3gaf_A 145 ISSMAGENTNV--------------------------------------RMASYGSSKAAVNHLTRNIAFDVGPMGIRVN 186 (256)
T ss_dssp ECCGGGTCCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred EcCHHHcCCCC--------------------------------------CchHHHHHHHHHHHHHHHHHHHHhhhCcEEE
Confidence 99986643211 016899999999999887654 589999
Q ss_pred EEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEE
Q psy7538 248 ILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCN 327 (543)
Q Consensus 248 IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyn 327 (543)
.++|+.|.++.... ... ......... ......+..++|+|++++.++..... -..|++++
T Consensus 187 ~v~PG~v~T~~~~~-------~~~-~~~~~~~~~---------~~p~~r~~~~~dva~~~~~L~s~~~~---~itG~~i~ 246 (256)
T 3gaf_A 187 AIAPGAIKTDALAT-------VLT-PEIERAMLK---------HTPLGRLGEAQDIANAALFLCSPAAA---WISGQVLT 246 (256)
T ss_dssp EEEECCBCCHHHHH-------HCC-HHHHHHHHT---------TCTTSSCBCHHHHHHHHHHHHSGGGT---TCCSCEEE
T ss_pred EEEEccccCchhhh-------ccC-HHHHHHHHh---------cCCCCCCCCHHHHHHHHHHHcCCccc---CccCCEEE
Confidence 99999886653210 000 111222222 12234578899999999988765432 13588999
Q ss_pred eecC
Q psy7538 328 LTSN 331 (543)
Q Consensus 328 i~s~ 331 (543)
+.+|
T Consensus 247 vdgG 250 (256)
T 3gaf_A 247 VSGG 250 (256)
T ss_dssp ESTT
T ss_pred ECCC
Confidence 9988
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.6e-18 Score=169.07 Aligned_cols=221 Identities=12% Similarity=0.099 Sum_probs=153.2
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+|+|+||||||+||++++++|++.|+ +|+++.|+.. +++++. +.+. .....++.++.+|+++
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~---~V~~~~r~~~------~~~~~~-----~~~~----~~~~~~~~~~~~D~~~ 63 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGD---RVAALDLSAE------TLEETA-----RTHW----HAYADKVLRVRADVAD 63 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHH------HHHHHH-----HHHS----TTTGGGEEEEECCTTC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHH-----HHHH----HhcCCcEEEEEecCCC
Confidence 68999999999999999999999986 7899998642 222211 1110 0112468899999998
Q ss_pred CCCCCCHHHHHHHhc-------CccEEEEcCccCCC----------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceE
Q psy7538 110 LKLGISEIDKKELID-------NVDIVYHVAATIRF----------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCF 169 (543)
Q Consensus 110 ~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~----------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~ 169 (543)
++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .+.+++
T Consensus 64 ~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~i 137 (250)
T 2cfc_A 64 EG------DVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVI 137 (250)
T ss_dssp HH------HHHHHHHHHHHHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred HH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEE
Confidence 75 6766665 79999999996532 1345678999999998777666431 256899
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+..... + ...|+.||+..|.+++.++. .+++
T Consensus 138 v~isS~~~~~~~~---------~-----------------------------~~~Y~~sK~a~~~~~~~l~~e~~~~gi~ 179 (250)
T 2cfc_A 138 VNIASVASLVAFP---------G-----------------------------RSAYTTSKGAVLQLTKSVAVDYAGSGIR 179 (250)
T ss_dssp EEECCGGGTSCCT---------T-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred EEECChhhccCCC---------C-----------------------------chhHHHHHHHHHHHHHHHHHHhcccCeE
Confidence 9999986643211 0 16899999999999887654 4899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
+.++||+.|+++..... ... ..+...+..+. ....+.+.+|+|++++.++..... ...+++
T Consensus 180 v~~v~Pg~v~t~~~~~~------~~~-~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~~~---~~~G~~ 240 (250)
T 2cfc_A 180 CNAVCPGMIETPMTQWR------LDQ-PELRDQVLARI---------PQKEIGTAAQVADAVMFLAGEDAT---YVNGAA 240 (250)
T ss_dssp EEEEEECSBCSTTTHHH------HTS-HHHHHHHHTTC---------TTCSCBCHHHHHHHHHHHHSTTCT---TCCSCE
T ss_pred EEEEEeCcCccCccccc------cCC-HHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCchhh---cccCCE
Confidence 99999999988753210 000 11222222211 123578999999999988765432 124789
Q ss_pred EEeecC
Q psy7538 326 CNLTSN 331 (543)
Q Consensus 326 yni~s~ 331 (543)
+++.++
T Consensus 241 ~~v~gG 246 (250)
T 2cfc_A 241 LVMDGA 246 (250)
T ss_dssp EEESTT
T ss_pred EEECCc
Confidence 998776
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.5e-18 Score=172.77 Aligned_cols=233 Identities=13% Similarity=0.118 Sum_probs=154.7
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+.+|+++||||+|+||++++++|++.|. +|+++.|... ++++++. +.+. .....++.++.+|+
T Consensus 23 l~~k~~lVTGas~GIG~~ia~~la~~G~---~V~~~~r~~~-----~~~~~~~-----~~~~----~~~~~~~~~~~~Dv 85 (281)
T 3v2h_A 23 MMTKTAVITGSTSGIGLAIARTLAKAGA---NIVLNGFGAP-----DEIRTVT-----DEVA----GLSSGTVLHHPADM 85 (281)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEECCCCH-----HHHHHHH-----HHHH----TTCSSCEEEECCCT
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCCh-----HHHHHHH-----HHHh----hccCCcEEEEeCCC
Confidence 5689999999999999999999999997 7888888531 2222211 1111 11235789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .+..++|
T Consensus 86 ~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv 159 (281)
T 3v2h_A 86 TKPS------EIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRII 159 (281)
T ss_dssp TCHH------HHHHHHHHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEE
Confidence 9875 6666655 78999999997532 2446678999999999999987321 2557899
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... ....|+.||+..+.+.+..+. .|+++
T Consensus 160 ~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~v 201 (281)
T 3v2h_A 160 NIASAHGLVASP--------------------------------------FKSAYVAAKHGIMGLTKTVALEVAESGVTV 201 (281)
T ss_dssp EECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred EECCcccccCCC--------------------------------------CchHHHHHHHHHHHHHHHHHHHhhhcCcEE
Confidence 999986643211 016899999999998877654 58999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHh-cCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAG-KGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~-~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
.+++|+.|.++....... ... ...... .........++.....+++++|+|++++.++..... ...|++
T Consensus 202 n~v~PG~v~t~~~~~~~~---~~~----~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~a~---~itG~~ 271 (281)
T 3v2h_A 202 NSICPGYVLTPLVEKQIP---DQA----RTRGITEEQVINEVMLKGQPTKKFITVEQVASLALYLAGDDAA---QITGTH 271 (281)
T ss_dssp EEEEECSBCC-----------------------------------CCTTCSCBCHHHHHHHHHHHHSSGGG---GCCSCE
T ss_pred EEEECCCCcCcchhhhcc---hhh----hhcCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHcCCCcC---CCCCcE
Confidence 999999998765332100 000 000000 000111233445567899999999999988765432 135889
Q ss_pred EEeecC
Q psy7538 326 CNLTSN 331 (543)
Q Consensus 326 yni~s~ 331 (543)
+++.+|
T Consensus 272 i~vdGG 277 (281)
T 3v2h_A 272 VSMDGG 277 (281)
T ss_dssp EEESTT
T ss_pred EEECCC
Confidence 999876
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.2e-18 Score=171.37 Aligned_cols=221 Identities=13% Similarity=0.085 Sum_probs=155.1
Q ss_pred cCCCEEEEEcCc--chhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 28 YENKSIFLSGGS--GFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 28 ~~~~~VlITGat--GFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
+++|+|+||||+ |+||++++++|++.|+ +|+++.|+.+ .++.++++ ..+. .++.++.+
T Consensus 6 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~---~V~~~~r~~~---~~~~~~~l---------~~~~-----~~~~~~~~ 65 (261)
T 2wyu_A 6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGA---EVALSYQAER---LRPEAEKL---------AEAL-----GGALLFRA 65 (261)
T ss_dssp CTTCEEEEESCCSSSSHHHHHHHHHHHHTC---EEEEEESCGG---GHHHHHHH---------HHHT-----TCCEEEEC
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCCC---EEEEEcCCHH---HHHHHHHH---------HHhc-----CCcEEEEC
Confidence 578999999999 9999999999999987 7889998752 23333332 1111 23678999
Q ss_pred cCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-----------cccHHHHHHHHHHHHHHHHHHHHhc-cCC
Q psy7538 106 DITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-----------DEPIKTAVILNTRGTRDMLELSKQM-KNL 166 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-----------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l 166 (543)
|+++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... .+-
T Consensus 66 D~~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 139 (261)
T 2wyu_A 66 DVTQDE------ELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREG 139 (261)
T ss_dssp CTTCHH------HHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE
T ss_pred CCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccC
Confidence 999875 6666655 68999999996531 2445678999999999999999764 112
Q ss_pred ceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----c
Q psy7538 167 KCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----L 242 (543)
Q Consensus 167 ~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~ 242 (543)
.++|++||..+..... ....|+.||+..|.+.+..+. +
T Consensus 140 g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~ 181 (261)
T 2wyu_A 140 GGIVTLTYYASEKVVP--------------------------------------KYNVMAIAKAALEASVRYLAYELGPK 181 (261)
T ss_dssp EEEEEEECGGGTSBCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred CEEEEEecccccCCCC--------------------------------------CchHHHHHHHHHHHHHHHHHHHHhhh
Confidence 5899999976542110 015899999999999887654 4
Q ss_pred CCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCC
Q psy7538 243 GMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322 (543)
Q Consensus 243 ~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~ 322 (543)
++++.+++|+.|.++.....+ ........+.... ....+.+++|+|++++.++..... ...
T Consensus 182 gi~v~~v~Pg~v~t~~~~~~~-------~~~~~~~~~~~~~---------p~~~~~~~~dva~~v~~l~s~~~~---~~t 242 (261)
T 2wyu_A 182 GVRVNAISAGPVRTVAARSIP-------GFTKMYDRVAQTA---------PLRRNITQEEVGNLGLFLLSPLAS---GIT 242 (261)
T ss_dssp TCEEEEEEECCCCCTGGGGCT-------THHHHHHHHHHHS---------TTSSCCCHHHHHHHHHHHHSGGGT---TCC
T ss_pred CcEEEEEeeCCCcCchhhhcc-------ccHHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHcChhhc---CCC
Confidence 899999999999886532211 1112222222111 112467899999999888765332 135
Q ss_pred CcEEEeecC
Q psy7538 323 KSVCNLTSN 331 (543)
Q Consensus 323 ~~vyni~s~ 331 (543)
++++++.++
T Consensus 243 G~~~~vdgG 251 (261)
T 2wyu_A 243 GEVVYVDAG 251 (261)
T ss_dssp SCEEEESTT
T ss_pred CCEEEECCC
Confidence 789999887
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.80 E-value=6.2e-19 Score=172.50 Aligned_cols=217 Identities=15% Similarity=0.127 Sum_probs=131.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||+|+||++++++|++.|+ +|+++.|+. ++++++. +.+. ....++.++.+|+
T Consensus 7 ~~~k~vlITGas~giG~~~a~~l~~~G~---~V~~~~r~~------~~~~~~~-----~~~~-----~~~~~~~~~~~D~ 67 (253)
T 3qiv_A 7 FENKVGIVTGSGGGIGQAYAEALAREGA---AVVVADINA------EAAEAVA-----KQIV-----ADGGTAISVAVDV 67 (253)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH-----HHHH-----HTTCEEEEEECCT
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEcCCH------HHHHHHH-----HHHH-----hcCCcEEEEEccC
Confidence 5789999999999999999999999987 788888864 2222211 1111 1235788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCC----------CcccHHHHHHHHHHHHHHHHHHH----HhccCC
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIR----------FDEPIKTAVILNTRGTRDMLELS----KQMKNL 166 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~----------~~~~~~~~~~~Nv~gt~~ll~~a----~~~~~l 166 (543)
++++ +++.+++ ++|+|||+||... ..+.++..+++|+.|+.++.+.+ ++. +.
T Consensus 68 ~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~ 140 (253)
T 3qiv_A 68 SDPE------SAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKR-GG 140 (253)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TC
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CC
Confidence 9875 6666655 7999999999731 12446678999999966666555 343 56
Q ss_pred ceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----c
Q psy7538 167 KCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----L 242 (543)
Q Consensus 167 ~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~ 242 (543)
.++|++||..+... ...|+.||+..|.+.+.++. .
T Consensus 141 g~iv~isS~~~~~~-----------------------------------------~~~Y~asK~a~~~~~~~la~e~~~~ 179 (253)
T 3qiv_A 141 GAIVNQSSTAAWLY-----------------------------------------SNYYGLAKVGINGLTQQLSRELGGR 179 (253)
T ss_dssp EEEEEECC----------------------------------------------------CCHHHHHHHHHHHHHHTTTT
T ss_pred CEEEEECCccccCC-----------------------------------------CchhHHHHHHHHHHHHHHHHHHhhc
Confidence 79999999865411 06799999999999887665 4
Q ss_pred CCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCC
Q psy7538 243 GMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322 (543)
Q Consensus 243 ~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~ 322 (543)
++++.+++|+.|.++..... .+..+...+.++ .....+..++|+|++++.++..... ...
T Consensus 180 gi~v~~v~PG~v~t~~~~~~--------~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~s~~~~---~~t 239 (253)
T 3qiv_A 180 NIRINAIAPGPIDTEANRTT--------TPKEMVDDIVKG---------LPLSRMGTPDDLVGMCLFLLSDEAS---WIT 239 (253)
T ss_dssp TEEEEEEEC------------------------------------------------CCHHHHHHHHHHSGGGT---TCC
T ss_pred CeEEEEEEecCCcccchhhc--------CcHHHHHHHhcc---------CCCCCCCCHHHHHHHHHHHcCcccc---CCC
Confidence 79999999999987643211 111111122221 1223455689999999888765432 135
Q ss_pred CcEEEeecC
Q psy7538 323 KSVCNLTSN 331 (543)
Q Consensus 323 ~~vyni~s~ 331 (543)
|++|++.++
T Consensus 240 G~~~~vdgG 248 (253)
T 3qiv_A 240 GQIFNVDGG 248 (253)
T ss_dssp SCEEEC---
T ss_pred CCEEEECCC
Confidence 889999887
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=1.2e-18 Score=171.26 Aligned_cols=228 Identities=12% Similarity=0.092 Sum_probs=156.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||+|+||++++++|++.|+ +|+++.|+... ..+.++++ ..+ ...++.++.+|+
T Consensus 12 ~~~k~vlITGasggiG~~~a~~l~~~G~---~V~~~~r~~~~--~~~~~~~l---------~~~----~~~~~~~~~~Dl 73 (265)
T 1h5q_A 12 FVNKTIIVTGGNRGIGLAFTRAVAAAGA---NVAVIYRSAAD--AVEVTEKV---------GKE----FGVKTKAYQCDV 73 (265)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHTTE---EEEEEESSCTT--HHHHHHHH---------HHH----HTCCEEEEECCT
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC---eEEEEeCcchh--hHHHHHHH---------HHh----cCCeeEEEEeeC
Confidence 5789999999999999999999999986 89999996532 12222221 111 124688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc----cCCceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM----KNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~l~~~ 169 (543)
++++ +++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++++... +...+|
T Consensus 74 ~~~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~i 147 (265)
T 1h5q_A 74 SNTD------IVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSI 147 (265)
T ss_dssp TCHH------HHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceE
Confidence 9875 5665554 48999999997542 2345668999999999999988653 224789
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+....... . .+. .....|+.||+..|.+++..+. .+++
T Consensus 148 v~~sS~~~~~~~~~~-~----~~~--------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~ 196 (265)
T 1h5q_A 148 VVTSSMSSQIINQSS-L----NGS--------------------------LTQVFYNSSKAACSNLVKGLAAEWASAGIR 196 (265)
T ss_dssp EEECCGGGTSCCEEE-T----TEE--------------------------CSCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred EEeCCchhhcccccc-c----ccc--------------------------ccccccHHHHHHHHHHHHHHHHHHHhcCcE
Confidence 999998654321100 0 000 0016899999999999987654 4899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
++++||+.|.++..... .+ ......... .....+++++|+|++++.++..... ...+++
T Consensus 197 v~~v~Pg~v~t~~~~~~--------~~-~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~---~~~G~~ 255 (265)
T 1h5q_A 197 VNALSPGYVNTDQTAHM--------DK-KIRDHQASN---------IPLNRFAQPEEMTGQAILLLSDHAT---YMTGGE 255 (265)
T ss_dssp EEEEEECSBCCGGGGGS--------CH-HHHHHHHHT---------CTTSSCBCGGGGHHHHHHHHSGGGT---TCCSCE
T ss_pred EEEEecCcccccccccc--------ch-hHHHHHHhc---------CcccCCCCHHHHHHHHHhhccCchh---cCcCcE
Confidence 99999999988754321 11 121221111 1123478999999999988865432 125889
Q ss_pred EEeecC
Q psy7538 326 CNLTSN 331 (543)
Q Consensus 326 yni~s~ 331 (543)
|++.++
T Consensus 256 ~~v~gG 261 (265)
T 1h5q_A 256 YFIDGG 261 (265)
T ss_dssp EEECTT
T ss_pred EEecCC
Confidence 999887
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.80 E-value=3.2e-18 Score=169.37 Aligned_cols=219 Identities=20% Similarity=0.140 Sum_probs=157.7
Q ss_pred hhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 26 KTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 26 ~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
.-++||+++||||+|+||++++++|++.|. +|+++.|+... .++..+++ ..++.++.+
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~--~~~~~~~~-----------------~~~~~~~~~ 64 (271)
T 3tzq_B 7 AELENKVAIITGACGGIGLETSRVLARAGA---RVVLADLPETD--LAGAAASV-----------------GRGAVHHVV 64 (271)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECTTSC--HHHHHHHH-----------------CTTCEEEEC
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEcCCHHH--HHHHHHHh-----------------CCCeEEEEC
Confidence 346899999999999999999999999996 78899987643 11111111 246788999
Q ss_pred cCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC---------cccHHHHHHHHHHHHHHHHHHH----HhccC
Q psy7538 106 DITQLKLGISEIDKKELID-------NVDIVYHVAATIRF---------DEPIKTAVILNTRGTRDMLELS----KQMKN 165 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~---------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~ 165 (543)
|+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++ ++. +
T Consensus 65 Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~ 137 (271)
T 3tzq_B 65 DLTNEV------SVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISA-G 137 (271)
T ss_dssp CTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred CCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-C
Confidence 999875 6766665 79999999997622 2345678999999999999998 443 5
Q ss_pred CceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----
Q psy7538 166 LKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME---- 241 (543)
Q Consensus 166 l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~---- 241 (543)
..++|++||..+..... ....|+.||+..+.+.+..+.
T Consensus 138 ~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~ 179 (271)
T 3tzq_B 138 GGAIVNISSATAHAAYD--------------------------------------MSTAYACTKAAIETLTRYVATQYGR 179 (271)
T ss_dssp CEEEEEECCGGGTSBCS--------------------------------------SCHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred CCEEEEECCHHHcCCCC--------------------------------------CChHHHHHHHHHHHHHHHHHHHHhh
Confidence 67999999986643211 016899999999999887654
Q ss_pred cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCC
Q psy7538 242 LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESE 321 (543)
Q Consensus 242 ~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~ 321 (543)
+|+++.+++|+.|.++..+. . . +........... ....+...+|+|++++.++..... -.
T Consensus 180 ~gi~vn~v~PG~v~t~~~~~------~-~-~~~~~~~~~~~~---------~~~r~~~p~dvA~~v~~L~s~~~~---~i 239 (271)
T 3tzq_B 180 HGVRCNAIAPGLVRTPRLEV------G-L-PQPIVDIFATHH---------LAGRIGEPHEIAELVCFLASDRAA---FI 239 (271)
T ss_dssp GTEEEEEEEECCBCCTTTC-----------CHHHHHHHHTTS---------TTSSCBCHHHHHHHHHHHHSGGGT---TC
T ss_pred cCEEEEEEEeCCCcCccccc------c-C-CHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCcccC---Cc
Confidence 58999999999998875431 1 1 122222222221 123467789999999988765432 13
Q ss_pred CCcEEEeecC
Q psy7538 322 RKSVCNLTSN 331 (543)
Q Consensus 322 ~~~vyni~s~ 331 (543)
.|+++++.++
T Consensus 240 tG~~i~vdGG 249 (271)
T 3tzq_B 240 TGQVIAADSG 249 (271)
T ss_dssp CSCEEEESTT
T ss_pred CCCEEEECCC
Confidence 5889999877
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=3.8e-19 Score=174.85 Aligned_cols=227 Identities=12% Similarity=0.102 Sum_probs=156.3
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
.+++|+|+||||+|+||++++++|++.|+ +|+++.|+. +++++. .+.+.. ...++.++.+|
T Consensus 11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~------~~~~~~-----~~~l~~-----~~~~~~~~~~D 71 (260)
T 2zat_A 11 PLENKVALVTASTDGIGLAIARRLAQDGA---HVVVSSRKQ------ENVDRT-----VATLQG-----EGLSVTGTVCH 71 (260)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHH-----HHHHHH-----TTCCEEEEECC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHH-----HHHHHh-----cCCceEEEEcc
Confidence 36789999999999999999999999986 789999864 222221 111211 12468889999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC--------cccHHHHHHHHHHHHHHHHHHHHhc---cCCce
Q psy7538 107 ITQLKLGISEIDKKELID-------NVDIVYHVAATIRF--------DEPIKTAVILNTRGTRDMLELSKQM---KNLKC 168 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~ 168 (543)
+++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... .+..+
T Consensus 72 ~~~~~------~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~ 145 (260)
T 2zat_A 72 VGKAE------DRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGS 145 (260)
T ss_dssp TTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEE
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCE
Confidence 99875 6666554 79999999996431 2345678999999999998887531 25689
Q ss_pred EEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCC
Q psy7538 169 FTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGM 244 (543)
Q Consensus 169 ~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~l 244 (543)
+|++||..+..... + ...|+.||+..|.+.+..+. .++
T Consensus 146 iv~isS~~~~~~~~---------~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi 187 (260)
T 2zat_A 146 VLIVSSVGAYHPFP---------N-----------------------------LGPYNVSKTALLGLTKNLAVELAPRNI 187 (260)
T ss_dssp EEEECCGGGTSCCT---------T-----------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred EEEEechhhcCCCC---------C-----------------------------chhHHHHHHHHHHHHHHHHHHhcccCe
Confidence 99999986653211 0 16899999999999887654 489
Q ss_pred cEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCc
Q psy7538 245 PCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKS 324 (543)
Q Consensus 245 p~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~ 324 (543)
++.+++|+.|.++.... .|. .. ........ ......+++++|+|++++.++..... -..++
T Consensus 188 ~v~~v~Pg~v~t~~~~~--~~~----~~-~~~~~~~~---------~~~~~~~~~~~dva~~v~~l~s~~~~---~~tG~ 248 (260)
T 2zat_A 188 RVNCLAPGLIKTNFSQV--LWM----DK-ARKEYMKE---------SLRIRRLGNPEDCAGIVSFLCSEDAS---YITGE 248 (260)
T ss_dssp EEEEEEECSBCSSTTHH--HHS----SH-HHHHHHHH---------HHTCSSCBCGGGGHHHHHHHTSGGGT---TCCSC
T ss_pred EEEEEEECcccCccchh--ccc----Ch-HHHHHHHh---------cCCCCCCCCHHHHHHHHHHHcCcccC---CccCC
Confidence 99999999887653210 000 00 01011111 11223578999999999888765432 12578
Q ss_pred EEEeecCCCCccc
Q psy7538 325 VCNLTSNKDYKIT 337 (543)
Q Consensus 325 vyni~s~~~~~~t 337 (543)
++++.++ .+.+
T Consensus 249 ~~~vdgG--~~~s 259 (260)
T 2zat_A 249 TVVVGGG--TASR 259 (260)
T ss_dssp EEEESTT--CCCC
T ss_pred EEEECCC--cccc
Confidence 9999988 5544
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.80 E-value=2.6e-18 Score=167.65 Aligned_cols=219 Identities=11% Similarity=0.121 Sum_probs=151.6
Q ss_pred hhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 26 KTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 26 ~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
.-+++|+|+||||+|+||++++++|++.|+ +|+++.|+. ++++++. .....++.++.+
T Consensus 10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~---~V~~~~r~~------~~~~~~~-------------~~~~~~~~~~~~ 67 (249)
T 3f9i_A 10 IDLTGKTSLITGASSGIGSAIARLLHKLGS---KVIISGSNE------EKLKSLG-------------NALKDNYTIEVC 67 (249)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH-------------HHHCSSEEEEEC
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEcCCH------HHHHHHH-------------HHhccCccEEEc
Confidence 456889999999999999999999999986 789999863 2333221 111246888999
Q ss_pred cCCCCCCCCCHHHHHHHhc---CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEEEE
Q psy7538 106 DITQLKLGISEIDKKELID---NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFTYI 172 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~---~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~v 172 (543)
|+++++ ++..+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... .+..++|++
T Consensus 68 D~~~~~------~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~i 141 (249)
T 3f9i_A 68 NLANKE------ECSNLISKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINI 141 (249)
T ss_dssp CTTSHH------HHHHHHHTCSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCCHH------HHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 999875 6777766 68999999997542 2456788999999999998887532 255799999
Q ss_pred ecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEE
Q psy7538 173 STAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMI 248 (543)
Q Consensus 173 ST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~I 248 (543)
||..+..... ....|+.||+..|.+.+..+. .++++.+
T Consensus 142 sS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~ 183 (249)
T 3f9i_A 142 SSIVGIAGNP--------------------------------------GQANYCASKAGLIGMTKSLSYEVATRGITVNA 183 (249)
T ss_dssp CCCCC--CCS--------------------------------------CSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred ccHHhccCCC--------------------------------------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEE
Confidence 9986643211 016899999999988876654 5899999
Q ss_pred EecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEe
Q psy7538 249 LRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNL 328 (543)
Q Consensus 249 lRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni 328 (543)
++|+.|.++..... .+ ........ ......+.+++|+|++++.++..... ...|+++++
T Consensus 184 v~PG~v~t~~~~~~--------~~-~~~~~~~~---------~~~~~~~~~~~dva~~~~~l~s~~~~---~~tG~~~~v 242 (249)
T 3f9i_A 184 VAPGFIKSDMTDKL--------NE-KQREAIVQ---------KIPLGTYGIPEDVAYAVAFLASNNAS---YITGQTLHV 242 (249)
T ss_dssp EEECCBC------C--------CH-HHHHHHHH---------HCTTCSCBCHHHHHHHHHHHHSGGGT---TCCSCEEEE
T ss_pred EecCccccCccccc--------CH-HHHHHHHh---------cCCCCCCcCHHHHHHHHHHHcCCccC---CccCcEEEE
Confidence 99999877643211 11 11111111 12335678899999999988875532 135889999
Q ss_pred ecC
Q psy7538 329 TSN 331 (543)
Q Consensus 329 ~s~ 331 (543)
.++
T Consensus 243 dgG 245 (249)
T 3f9i_A 243 NGG 245 (249)
T ss_dssp STT
T ss_pred CCC
Confidence 887
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.7e-18 Score=171.94 Aligned_cols=241 Identities=13% Similarity=0.090 Sum_probs=161.9
Q ss_pred hhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCC------CHHHHHHHHhcCchhHHHHhhcCcCCCCc
Q psy7538 26 KTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGK------TPNQRVEELFESPVFDALKTLRGKSILQK 99 (543)
Q Consensus 26 ~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~------~~~~rl~~~~~~~~f~~l~~~~~~~~~~~ 99 (543)
.-++||+++||||+|+||++++++|++.|+ +|+++.|..... ...+++++..+ .+. ....+
T Consensus 9 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-----~~~-----~~~~~ 75 (278)
T 3sx2_A 9 GPLTGKVAFITGAARGQGRAHAVRLAADGA---DIIAVDLCDQIASVPYPLATPEELAATVK-----LVE-----DIGSR 75 (278)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEECCSCCTTCSSCCCCHHHHHHHHH-----HHH-----HHTCC
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCC---eEEEEecccccccccccccchHHHHHHHH-----HHH-----hcCCe
Confidence 347899999999999999999999999997 788888873211 11233332211 111 12357
Q ss_pred eEEEEccCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC---cccHHHHHHHHHHHHHHHHHHHHhc----cC
Q psy7538 100 IQVISGDITQLKLGISEIDKKELID-------NVDIVYHVAATIRF---DEPIKTAVILNTRGTRDMLELSKQM----KN 165 (543)
Q Consensus 100 v~~i~gDl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~~a~~~----~~ 165 (543)
+.++.+|+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... +.
T Consensus 76 ~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~ 149 (278)
T 3sx2_A 76 IVARQADVRDRE------SLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGT 149 (278)
T ss_dssp EEEEECCTTCHH------HHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCS
T ss_pred EEEEeCCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC
Confidence 899999999875 6766665 79999999997654 3456778999999999999987542 12
Q ss_pred CceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----
Q psy7538 166 LKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME---- 241 (543)
Q Consensus 166 l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~---- 241 (543)
-.++|++||..+...... +. +. ...|+.||+..+.+.+..+.
T Consensus 150 ~g~iv~isS~~~~~~~~~--------~~-~~-------------------------~~~Y~asKaa~~~~~~~la~e~~~ 195 (278)
T 3sx2_A 150 GGSIVLISSSAGLAGVGS--------AD-PG-------------------------SVGYVAAKHGVVGLMRVYANLLAG 195 (278)
T ss_dssp CEEEEEECCGGGTSCCCC--------SS-HH-------------------------HHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred CcEEEEEccHHhcCCCcc--------CC-CC-------------------------chHhHHHHHHHHHHHHHHHHHHhc
Confidence 468999999866432110 00 00 05799999999998887654
Q ss_pred cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHH-hcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCC
Q psy7538 242 LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGA-GKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKES 320 (543)
Q Consensus 242 ~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~-~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~ 320 (543)
.++++..++|+.|.++.... ......+... .........++... ..++.++|+|++++.++..... -
T Consensus 196 ~gi~vn~v~PG~v~T~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~p~dvA~~v~~l~s~~~~---~ 263 (278)
T 3sx2_A 196 QMIRVNSIHPSGVETPMINN--------EFTREWLAKMAAATDTPGAMGNAMP-VEVLAPEDVANAVAWLVSDQAR---Y 263 (278)
T ss_dssp GTEEEEEEEESCBSSTTTSS--------HHHHHHHHHHHHHCC--CTTSCSSS-CSSBCHHHHHHHHHHHTSGGGT---T
T ss_pred cCcEEEEEecCCccCccchh--------hhHHHHHhhccchhhhhhhhhhhcC-cCcCCHHHHHHHHHHHhCcccc---c
Confidence 57999999999997764321 0011111111 11111111222223 6788999999999988865432 1
Q ss_pred CCCcEEEeecC
Q psy7538 321 ERKSVCNLTSN 331 (543)
Q Consensus 321 ~~~~vyni~s~ 331 (543)
..|+++++.+|
T Consensus 264 itG~~i~vdGG 274 (278)
T 3sx2_A 264 ITGVTLPVDAG 274 (278)
T ss_dssp CCSCEEEESTT
T ss_pred ccCCEEeECCC
Confidence 35889999877
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=3.9e-18 Score=169.07 Aligned_cols=226 Identities=10% Similarity=0.031 Sum_probs=153.2
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
-+++|+++||||+|+||++++++|++.|+ +|+++.|.. .++++++. +.+... ...++.++.+|
T Consensus 8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~-----~~~~~~~~-----~~~~~~----~~~~~~~~~~D 70 (276)
T 1mxh_A 8 ASECPAAVITGGARRIGHSIAVRLHQQGF---RVVVHYRHS-----EGAAQRLV-----AELNAA----RAGSAVLCKGD 70 (276)
T ss_dssp ---CCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSC-----HHHHHHHH-----HHHHHH----STTCEEEEECC
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCC-----hHHHHHHH-----HHHHHh----cCCceEEEecc
Confidence 36789999999999999999999999986 789999832 12232221 112111 02468899999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCCc------------------ccHHHHHHHHHHHHHHHHHHHH
Q psy7538 107 ITQLKLGISEIDKKELID-------NVDIVYHVAATIRFD------------------EPIKTAVILNTRGTRDMLELSK 161 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~~------------------~~~~~~~~~Nv~gt~~ll~~a~ 161 (543)
+++++- ..++++.+++ ++|++||+||..... +.++..+++|+.|+.++++++.
T Consensus 71 l~~~~~--~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 148 (276)
T 1mxh_A 71 LSLSSS--LLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFA 148 (276)
T ss_dssp CSSSTT--HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred CCCccc--cHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHH
Confidence 999710 0015655554 789999999965321 4566789999999999999998
Q ss_pred hc--cCC------ceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHH
Q psy7538 162 QM--KNL------KCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAE 233 (543)
Q Consensus 162 ~~--~~l------~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE 233 (543)
.. .+. .++|++||..+..... + ...|+.||+..+
T Consensus 149 ~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------~-----------------------------~~~Y~asK~a~~ 190 (276)
T 1mxh_A 149 RRQGEGGAWRSRNLSVVNLCDAMTDLPLP---------G-----------------------------FCVYTMAKHALG 190 (276)
T ss_dssp HTC-------CCCEEEEEECCGGGGSCCT---------T-----------------------------CHHHHHHHHHHH
T ss_pred HHHhcCCCCCCCCcEEEEECchhhcCCCC---------C-----------------------------CeehHHHHHHHH
Confidence 74 233 7999999986653211 0 168999999999
Q ss_pred HHHHHHhh----cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHH
Q psy7538 234 GLVAECME----LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFL 309 (543)
Q Consensus 234 ~~v~~~~~----~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~ 309 (543)
.+.+..+. .|+.+.+++|+.|.++ . . ..+ .......... + ..+++.+++|+|++++.
T Consensus 191 ~l~~~la~e~~~~gi~v~~v~PG~v~t~-~-~--------~~~-~~~~~~~~~~-------p-~~r~~~~~~dva~~v~~ 251 (276)
T 1mxh_A 191 GLTRAAALELAPRHIRVNAVAPGLSLLP-P-A--------MPQ-ETQEEYRRKV-------P-LGQSEASAAQIADAIAF 251 (276)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEESSBSCC-S-S--------SCH-HHHHHHHTTC-------T-TTSCCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCeEEEEEecCcccCC-c-c--------CCH-HHHHHHHhcC-------C-CCCCCCCHHHHHHHHHH
Confidence 99877654 4899999999999887 2 1 111 2222222211 0 11237899999999998
Q ss_pred HhhhhcccCCCCCCcEEEeecC
Q psy7538 310 FTWDFLNSKESERKSVCNLTSN 331 (543)
Q Consensus 310 a~~~~~~~~~~~~~~vyni~s~ 331 (543)
++..... ...|+++++.++
T Consensus 252 l~s~~~~---~~tG~~~~vdgG 270 (276)
T 1mxh_A 252 LVSKDAG---YITGTTLKVDGG 270 (276)
T ss_dssp HHSGGGT---TCCSCEEEESTT
T ss_pred HhCcccc---CccCcEEEECCc
Confidence 8765332 135789999876
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.80 E-value=5e-18 Score=165.86 Aligned_cols=218 Identities=10% Similarity=0.119 Sum_probs=144.7
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|+||++++++|++.|+ +|+++.|+.... . .++.++.+|+
T Consensus 5 l~~k~vlVTGas~giG~~ia~~l~~~G~---~V~~~~r~~~~~-----------------------~---~~~~~~~~D~ 55 (250)
T 2fwm_X 5 FSGKNVWVTGAGKGIGYATALAFVEAGA---KVTGFDQAFTQE-----------------------Q---YPFATEVMDV 55 (250)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCCCSS-----------------------C---CSSEEEECCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCchhhh-----------------------c---CCceEEEcCC
Confidence 5789999999999999999999999986 889999975311 1 1277889999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHH----hccCCceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSK----QMKNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~----~~~~l~~~ 169 (543)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++. +. +..++
T Consensus 56 ~d~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~i 128 (250)
T 2fwm_X 56 ADAA------QVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQ-RGGAI 128 (250)
T ss_dssp TCHH------HHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhc-CCCEE
Confidence 9875 6766665 79999999997542 24567789999999999999883 33 56899
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+..... ....|+.||+..|.+.+..+. .+++
T Consensus 129 v~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~ 170 (250)
T 2fwm_X 129 VTVASDAAHTPRI--------------------------------------GMSAYGASKAALKSLALSVGLELAGSGVR 170 (250)
T ss_dssp EEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred EEECchhhCCCCC--------------------------------------CCchHHHHHHHHHHHHHHHHHHhCccCCE
Confidence 9999986643211 016899999999999887654 4899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHH-HHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCc
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLI-GAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKS 324 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~-~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~ 324 (543)
+.++||+.|.++...... .+..... .... .... .........+.+.+|+|++++.++..... ...++
T Consensus 171 v~~v~Pg~v~t~~~~~~~-------~~~~~~~~~~~~-~~~~-~~~~~p~~~~~~p~dvA~~v~~l~s~~~~---~~tG~ 238 (250)
T 2fwm_X 171 CNVVSPGSTDTDMQRTLW-------VSDDAEEQRIRG-FGEQ-FKLGIPLGKIARPQEIANTILFLASDLAS---HITLQ 238 (250)
T ss_dssp EEEEEECCC---------------------------------------------CHHHHHHHHHHHHSGGGT---TCCSC
T ss_pred EEEEECCcccCccccccc-------cChhHHHHHHhh-hhhc-ccccCCCCCCcCHHHHHHHHHHHhCcccc---CCCCC
Confidence 999999999876432110 0000000 0000 0000 00001112467899999999988865432 13588
Q ss_pred EEEeecC
Q psy7538 325 VCNLTSN 331 (543)
Q Consensus 325 vyni~s~ 331 (543)
++++.++
T Consensus 239 ~i~vdGG 245 (250)
T 2fwm_X 239 DIVVDGG 245 (250)
T ss_dssp EEEESTT
T ss_pred EEEECCC
Confidence 9998876
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.80 E-value=2.9e-18 Score=168.79 Aligned_cols=222 Identities=12% Similarity=0.106 Sum_probs=157.6
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||+|+||++++++|++.|+ +|+++.|+.. ++++.. +.++ .....++.++.+|+
T Consensus 8 l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~------~~~~~~-----~~l~----~~~~~~~~~~~~Dv 69 (262)
T 3pk0_A 8 LQGRSVVVTGGTKGIGRGIATVFARAGA---NVAVAGRSTA------DIDACV-----ADLD----QLGSGKVIGVQTDV 69 (262)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESCHH------HHHHHH-----HHHH----TTSSSCEEEEECCT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHH-----HHHH----hhCCCcEEEEEcCC
Confidence 5789999999999999999999999987 8889988642 222211 1111 11124789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .+..++|
T Consensus 70 ~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv 143 (262)
T 3pk0_A 70 SDRA------QCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVV 143 (262)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEE
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 9875 6666654 79999999997532 2446678999999999999888653 2457999
Q ss_pred EEecCccc-cCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 171 YISTAYCH-PSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 171 ~vST~y~~-~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
++||..+. ... | ....|+.||+..+.+.+..+. +|++
T Consensus 144 ~isS~~~~~~~~----------~----------------------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~ 185 (262)
T 3pk0_A 144 LTSSITGPITGY----------P----------------------------GWSHYGATKAAQLGFMRTAAIELAPHKIT 185 (262)
T ss_dssp EECCSBTTTBCC----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred EEechhhccCCC----------C----------------------------CChhhHHHHHHHHHHHHHHHHHHHhhCcE
Confidence 99998653 110 0 016899999999999887654 5899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
+.+++|+.|.++.... .. ........... ....+...+|+|++++.++..... -..|++
T Consensus 186 vn~v~PG~v~t~~~~~--------~~-~~~~~~~~~~~---------p~~r~~~p~dva~~v~~L~s~~~~---~itG~~ 244 (262)
T 3pk0_A 186 VNAIMPGNIMTEGLLE--------NG-EEYIASMARSI---------PAGALGTPEDIGHLAAFLATKEAG---YITGQA 244 (262)
T ss_dssp EEEEEECSBCCHHHHT--------TC-HHHHHHHHTTS---------TTSSCBCHHHHHHHHHHHHSGGGT---TCCSCE
T ss_pred EEEEEeCcCcCccccc--------cC-HHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCcccc---CCcCCE
Confidence 9999999998763221 11 12223332221 123467889999999888765432 135889
Q ss_pred EEeecCC
Q psy7538 326 CNLTSNK 332 (543)
Q Consensus 326 yni~s~~ 332 (543)
+++.++.
T Consensus 245 i~vdGG~ 251 (262)
T 3pk0_A 245 IAVDGGQ 251 (262)
T ss_dssp EEESTTT
T ss_pred EEECCCe
Confidence 9998873
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.4e-18 Score=169.51 Aligned_cols=220 Identities=14% Similarity=0.108 Sum_probs=151.5
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||+|+||++++++|++.|+ +|+++.|+. ++++++. +.+ .. ..++.++.+|+
T Consensus 4 ~~~k~vlVtGasggiG~~~a~~l~~~G~---~V~~~~r~~------~~~~~~~-----~~~-----~~-~~~~~~~~~D~ 63 (251)
T 1zk4_A 4 LDGKVAIITGGTLGIGLAIATKFVEEGA---KVMITGRHS------DVGEKAA-----KSV-----GT-PDQIQFFQHDS 63 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH-----HHH-----CC-TTTEEEEECCT
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHH-----HHh-----hc-cCceEEEECCC
Confidence 5789999999999999999999999986 789999864 2222211 011 11 14789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCC-ceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNL-KCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l-~~~ 169 (543)
++++ +++.+++ .+|+|||+||.... .+.++..+++|+.|+.++.+.+... .+. +++
T Consensus 64 ~~~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~i 137 (251)
T 1zk4_A 64 SDED------GWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASI 137 (251)
T ss_dssp TCHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEE
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEE
Confidence 9875 6666654 48999999996532 2345678999999888776665431 145 799
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHh------hcC
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECM------ELG 243 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~------~~~ 243 (543)
|++||..+..... + ...|+.||+..|.+.+..+ ..+
T Consensus 138 v~isS~~~~~~~~---------~-----------------------------~~~Y~~sK~a~~~~~~~~a~e~~~~~~~ 179 (251)
T 1zk4_A 138 INMSSIEGFVGDP---------S-----------------------------LGAYNASKGAVRIMSKSAALDCALKDYD 179 (251)
T ss_dssp EEECCGGGTSCCT---------T-----------------------------CHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEeCCchhccCCC---------C-----------------------------CccchHHHHHHHHHHHHHHHHhcccCCC
Confidence 9999986643211 0 1689999999999887643 247
Q ss_pred CcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCC
Q psy7538 244 MPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERK 323 (543)
Q Consensus 244 lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~ 323 (543)
+++.++||+.|+++.....+ . ....... ........+++++|+|++++.++..... ...+
T Consensus 180 i~v~~v~Pg~v~t~~~~~~~-------~--~~~~~~~--------~~~~~~~~~~~~~dva~~~~~l~~~~~~---~~~G 239 (251)
T 1zk4_A 180 VRVNTVHPGYIKTPLVDDLP-------G--AEEAMSQ--------RTKTPMGHIGEPNDIAYICVYLASNESK---FATG 239 (251)
T ss_dssp EEEEEEEECCBCCHHHHTST-------T--HHHHHTS--------TTTCTTSSCBCHHHHHHHHHHHHSGGGT---TCCS
T ss_pred eEEEEEeeCcCcchhhhhcC-------c--hhhhHHH--------hhcCCCCCCcCHHHHHHHHHHHcCcccc---cccC
Confidence 99999999999887432111 0 1111100 0111224588999999999988865432 1247
Q ss_pred cEEEeecC
Q psy7538 324 SVCNLTSN 331 (543)
Q Consensus 324 ~vyni~s~ 331 (543)
+++++.++
T Consensus 240 ~~~~v~gG 247 (251)
T 1zk4_A 240 SEFVVDGG 247 (251)
T ss_dssp CEEEESTT
T ss_pred cEEEECCC
Confidence 89999876
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.79 E-value=3.8e-18 Score=169.67 Aligned_cols=234 Identities=15% Similarity=0.116 Sum_probs=158.4
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCC-------CHHHHHHHHhcCchhHHHHhhcCcCCCCc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGK-------TPNQRVEELFESPVFDALKTLRGKSILQK 99 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~-------~~~~rl~~~~~~~~f~~l~~~~~~~~~~~ 99 (543)
-++||+++||||+|+||++++++|++.|. +|+++.|..... ...++++++.+ .+ .....+
T Consensus 12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-----~~-----~~~~~~ 78 (280)
T 3pgx_A 12 SLQGRVAFITGAARGQGRSHAVRLAAEGA---DIIACDICAPVSASVTYAPASPEDLDETAR-----LV-----EDQGRK 78 (280)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEECCSCCCTTCCSCCCCHHHHHHHHH-----HH-----HTTTCC
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeccccccccccccccCHHHHHHHHH-----HH-----HhcCCe
Confidence 46899999999999999999999999997 888888853211 01334433211 11 122357
Q ss_pred eEEEEccCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc--
Q psy7538 100 IQVISGDITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM-- 163 (543)
Q Consensus 100 v~~i~gDl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-- 163 (543)
+.++.+|+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 79 ~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~ 152 (280)
T 3pgx_A 79 ALTRVLDVRDDA------ALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMI 152 (280)
T ss_dssp EEEEECCTTCHH------HHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 889999999875 6666654 79999999997642 2446678999999999999988442
Q ss_pred --cCCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh
Q psy7538 164 --KNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME 241 (543)
Q Consensus 164 --~~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~ 241 (543)
+.-.++|++||..+...... ...|+.||+..+.+.+..+.
T Consensus 153 ~~~~~g~iv~isS~~~~~~~~~--------------------------------------~~~Y~asKaa~~~~~~~la~ 194 (280)
T 3pgx_A 153 EAGNGGSIVVVSSSAGLKATPG--------------------------------------NGHYSASKHGLTALTNTLAI 194 (280)
T ss_dssp HHCSCEEEEEECCGGGTSCCTT--------------------------------------BHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCCCEEEEEcchhhccCCCC--------------------------------------chhHHHHHHHHHHHHHHHHH
Confidence 22468999999866432110 16899999999998877654
Q ss_pred ----cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCc--eeEEeecCCcccccchHHHHHHHHHHHhhhhc
Q psy7538 242 ----LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGV--IRSMYCKNTGMADFLPADVAINGVFLFTWDFL 315 (543)
Q Consensus 242 ----~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~--~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~ 315 (543)
+|+++.+++|+.|.++..++ ........... ...+.........++.++|+|++++.++....
T Consensus 195 e~~~~gi~vn~v~PG~v~t~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~~ 263 (280)
T 3pgx_A 195 ELGEYGIRVNSIHPYSVETPMIEP-----------EAMMEIFARHPSFVHSFPPMPVQPNGFMTADEVADVVAWLAGDGS 263 (280)
T ss_dssp HHGGGTEEEEEEEECSBCSTTCCH-----------HHHHHHHHHCGGGGGGSCCBTTBCSSCBCHHHHHHHHHHHHSGGG
T ss_pred HhhhcCeEEEEEeeCcccCcccch-----------hhhhhhhhcCchhhhhhhhcccCCCCCCCHHHHHHHHHHHhCccc
Confidence 58999999999998764321 11111111110 00000011111248899999999988876544
Q ss_pred ccCCCCCCcEEEeecC
Q psy7538 316 NSKESERKSVCNLTSN 331 (543)
Q Consensus 316 ~~~~~~~~~vyni~s~ 331 (543)
. -..|+++++.++
T Consensus 264 ~---~itG~~i~vdGG 276 (280)
T 3pgx_A 264 G---TLTGTQIPVDKG 276 (280)
T ss_dssp T---TCSSCEEEESTT
T ss_pred c---CCCCCEEEECCC
Confidence 2 135889999876
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.2e-18 Score=171.31 Aligned_cols=216 Identities=15% Similarity=0.133 Sum_probs=151.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||+|+||++++++|++.|+ +|+++.|+... .++-.+++ ..++.++.+|+
T Consensus 10 ~~~k~vlVTGasggiG~~~a~~l~~~G~---~V~~~~r~~~~--~~~~~~~~-----------------~~~~~~~~~D~ 67 (265)
T 2o23_A 10 VKGLVAVITGGASGLGLATAERLVGQGA---SAVLLDLPNSG--GEAQAKKL-----------------GNNCVFAPADV 67 (265)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECTTSS--HHHHHHHH-----------------CTTEEEEECCT
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCcHh--HHHHHHHh-----------------CCceEEEEcCC
Confidence 5789999999999999999999999987 78999997643 11111111 24688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------------cccHHHHHHHHHHHHHHHHHHHHhc---c
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------------DEPIKTAVILNTRGTRDMLELSKQM---K 164 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 164 (543)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... .
T Consensus 68 ~~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~ 141 (265)
T 2o23_A 68 TSEK------DVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQN 141 (265)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS
T ss_pred CCHH------HHHHHHHHHHHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 9875 6776665 79999999997532 2345678999999999999998763 1
Q ss_pred ------CCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHH
Q psy7538 165 ------NLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAE 238 (543)
Q Consensus 165 ------~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~ 238 (543)
+..++|++||..+..... + ...|+.||+..+.+.+.
T Consensus 142 ~~~~~~~~~~iv~isS~~~~~~~~---------~-----------------------------~~~Y~~sK~a~~~~~~~ 183 (265)
T 2o23_A 142 EPDQGGQRGVIINTASVAAFEGQV---------G-----------------------------QAAYSASKGGIVGMTLP 183 (265)
T ss_dssp CCCTTSCCEEEEEECCTHHHHCCT---------T-----------------------------CHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCcEEEEeCChhhcCCCC---------C-----------------------------CchhHHHHHHHHHHHHH
Confidence 457899999986643211 0 16899999999888876
Q ss_pred Hhh----cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhh
Q psy7538 239 CME----LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDF 314 (543)
Q Consensus 239 ~~~----~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~ 314 (543)
.+. .++++.+++|+.|.++.....+ ........... + ....+++++|+|++++.++...
T Consensus 184 la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---------~~~~~~~~~~~-------~-~~~~~~~~~dva~~~~~l~~~~ 246 (265)
T 2o23_A 184 IARDLAPIGIRVMTIAPGLFGTPLLTSLP---------EKVCNFLASQV-------P-FPSRLGDPAEYAHLVQAIIENP 246 (265)
T ss_dssp HHHHHGGGTEEEEEEEECCBCCC-------------------CHHHHTC-------S-SSCSCBCHHHHHHHHHHHHHCT
T ss_pred HHHHHhhcCcEEEEEEeccccCccccccC---------HHHHHHHHHcC-------C-CcCCCCCHHHHHHHHHHHhhcC
Confidence 554 4899999999988765332111 00000011110 0 0134678999999999887543
Q ss_pred cccCCCCCCcEEEeecC
Q psy7538 315 LNSKESERKSVCNLTSN 331 (543)
Q Consensus 315 ~~~~~~~~~~vyni~s~ 331 (543)
.. .++++++.++
T Consensus 247 ~~-----~G~~i~vdgG 258 (265)
T 2o23_A 247 FL-----NGEVIRLDGA 258 (265)
T ss_dssp TC-----CSCEEEESTT
T ss_pred cc-----CceEEEECCC
Confidence 32 5889998876
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.79 E-value=3.4e-18 Score=169.67 Aligned_cols=220 Identities=11% Similarity=0.088 Sum_probs=152.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||+|+||++++++|++.|+ +|+++.|+... .+.+.+.+ . ....++.++.+|+
T Consensus 32 l~~k~vlITGasggIG~~la~~L~~~G~---~V~~~~r~~~~---~~~~~~~~--------~-----~~~~~~~~~~~Dl 92 (279)
T 3ctm_A 32 LKGKVASVTGSSGGIGWAVAEAYAQAGA---DVAIWYNSHPA---DEKAEHLQ--------K-----TYGVHSKAYKCNI 92 (279)
T ss_dssp CTTCEEEETTTTSSHHHHHHHHHHHHTC---EEEEEESSSCC---HHHHHHHH--------H-----HHCSCEEEEECCT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHHH--------H-----hcCCcceEEEeec
Confidence 6789999999999999999999999986 78999997643 12222111 1 1124688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC------c---ccHHHHHHHHHHH----HHHHHHHHHhccCCc
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF------D---EPIKTAVILNTRG----TRDMLELSKQMKNLK 167 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~------~---~~~~~~~~~Nv~g----t~~ll~~a~~~~~l~ 167 (543)
++++ +++.+++ .+|+|||+||.... + +.++..+++|+.| ++++++.+++. +.+
T Consensus 93 ~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~~ 165 (279)
T 3ctm_A 93 SDPK------SVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKN-GKG 165 (279)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCC
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCC
Confidence 9875 6666654 49999999996543 2 2345689999999 56777777765 678
Q ss_pred eEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cC
Q psy7538 168 CFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LG 243 (543)
Q Consensus 168 ~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~ 243 (543)
+||++||..+..... +++ ...|+.||+..|.+++..+. .+
T Consensus 166 ~iv~isS~~~~~~~~-------~~~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~~ 209 (279)
T 3ctm_A 166 SLIITSSISGKIVNI-------PQL-----------------------------QAPYNTAKAACTHLAKSLAIEWAPFA 209 (279)
T ss_dssp EEEEECCCTTSCC----------CC-----------------------------HHHHHHHHHHHHHHHHHHHHHTTTTC
T ss_pred eEEEECchHhccCCC-------CCC-----------------------------cccHHHHHHHHHHHHHHHHHHhcccC
Confidence 999999986542200 000 06899999999999987765 46
Q ss_pred CcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCC
Q psy7538 244 MPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERK 323 (543)
Q Consensus 244 lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~ 323 (543)
.+.+++|+.|.++.... .. .......... .....+++++|+|++++.++..... ...+
T Consensus 210 -~v~~v~Pg~v~t~~~~~--------~~-~~~~~~~~~~---------~p~~~~~~~~dvA~~~~~l~s~~~~---~~tG 267 (279)
T 3ctm_A 210 -RVNTISPGYIDTDITDF--------AS-KDMKAKWWQL---------TPLGREGLTQELVGGYLYLASNAST---FTTG 267 (279)
T ss_dssp -EEEEEEECSBSSTTTSS--------CC-HHHHHHHHHH---------STTCSCBCGGGTHHHHHHHHSGGGT---TCCS
T ss_pred -CEEEEeccCCccccccc--------cC-hHHHHHHHHh---------CCccCCcCHHHHHHHHHHHhCcccc---CccC
Confidence 99999999886653311 11 1122111111 1123478899999999988865432 1357
Q ss_pred cEEEeecC
Q psy7538 324 SVCNLTSN 331 (543)
Q Consensus 324 ~vyni~s~ 331 (543)
+++++.++
T Consensus 268 ~~i~vdgG 275 (279)
T 3ctm_A 268 SDVVIDGG 275 (279)
T ss_dssp CEEEESTT
T ss_pred CEEEECCC
Confidence 89999876
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=8.9e-18 Score=164.55 Aligned_cols=216 Identities=15% Similarity=0.073 Sum_probs=150.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||+|+||++++++|++.|+ +|+++.|+. ++++++.+ ....++.++.+|+
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~------~~~~~~~~-------------~~~~~~~~~~~D~ 60 (254)
T 1hdc_A 3 LSGKTVIITGGARGLGAEAARQAVAAGA---RVVLADVLD------EEGAATAR-------------ELGDAARYQHLDV 60 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHHH-------------TTGGGEEEEECCT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHHH-------------HhCCceeEEEecC
Confidence 5789999999999999999999999987 788898864 23332211 1123678899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHH----HHhccCCceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLEL----SKQMKNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~----a~~~~~l~~~ 169 (543)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+..+.+. +++. +..++
T Consensus 61 ~~~~------~~~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~i 133 (254)
T 1hdc_A 61 TIEE------DWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA-GGGSI 133 (254)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEE
Confidence 9875 6666665 79999999997542 234667899999999855544 4444 56899
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+..... ....|+.||+..|.+.+..+. .+++
T Consensus 134 v~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~ 175 (254)
T 1hdc_A 134 VNISSAAGLMGLA--------------------------------------LTSSYGASKWGVRGLSKLAAVELGTDRIR 175 (254)
T ss_dssp EEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred EEECchhhccCCC--------------------------------------CchhHHHHHHHHHHHHHHHHHHhhhcCeE
Confidence 9999986643211 016899999999998877654 5899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccc-hHHHHHHHHHHHhhhhcccCCCCCCc
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFL-PADVAINGVFLFTWDFLNSKESERKS 324 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V-~vddva~a~i~a~~~~~~~~~~~~~~ 324 (543)
+.++||+.|.++... ......... .........+. +.+|+|++++.++..... ...++
T Consensus 176 v~~v~Pg~v~t~~~~-----------------~~~~~~~~~-~~~~~p~~~~~~~~~dvA~~v~~l~s~~~~---~~tG~ 234 (254)
T 1hdc_A 176 VNSVHPGMTYTPMTA-----------------ETGIRQGEG-NYPNTPMGRVGNEPGEIAGAVVKLLSDTSS---YVTGA 234 (254)
T ss_dssp EEEEEECSBCCHHHH-----------------HHTCCCSTT-SCTTSTTSSCB-CHHHHHHHHHHHHSGGGT---TCCSC
T ss_pred EEEEecccCcCcccc-----------------ccchhHHHH-HHhcCCCCCCCCCHHHHHHHHHHHhCchhc---CCCCC
Confidence 999999988765321 000000000 00011112366 899999999988765432 13588
Q ss_pred EEEeecC
Q psy7538 325 VCNLTSN 331 (543)
Q Consensus 325 vyni~s~ 331 (543)
++++.++
T Consensus 235 ~~~vdgG 241 (254)
T 1hdc_A 235 ELAVDGG 241 (254)
T ss_dssp EEEESTT
T ss_pred EEEECCC
Confidence 9998876
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.8e-18 Score=170.47 Aligned_cols=221 Identities=13% Similarity=0.067 Sum_probs=154.4
Q ss_pred cCCCEEEEEcCc--chhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 28 YENKSIFLSGGS--GFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 28 ~~~~~VlITGat--GFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
+++|+|+||||+ |+||++++++|++.|+ +|+++.|+.+ .++.++++ ..+. ....++.+
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~---~V~~~~r~~~---~~~~~~~l---------~~~~-----~~~~~~~~ 66 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHREGA---ELAFTYQNDK---LKGRVEEF---------AAQL-----GSDIVLQC 66 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTC---EEEEEESSTT---THHHHHHH---------HHHT-----TCCCEEEC
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCC---EEEEEcCcHH---HHHHHHHH---------HHhc-----CCcEEEEc
Confidence 678999999999 9999999999999986 7899999762 23333332 1111 12367899
Q ss_pred cCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC------------cccHHHHHHHHHHHHHHHHHHHHhc-cC
Q psy7538 106 DITQLKLGISEIDKKELID-------NVDIVYHVAATIRF------------DEPIKTAVILNTRGTRDMLELSKQM-KN 165 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~------------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~ 165 (543)
|+++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... .+
T Consensus 67 D~~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 140 (265)
T 1qsg_A 67 DVAEDA------SIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP 140 (265)
T ss_dssp CTTCHH------HHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE
T ss_pred cCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc
Confidence 999875 6666654 68999999997541 1345668999999999999999764 11
Q ss_pred CceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----
Q psy7538 166 LKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME---- 241 (543)
Q Consensus 166 l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~---- 241 (543)
-.++|++||..+..... + ...|+.||+..|.+.+..+.
T Consensus 141 ~g~iv~isS~~~~~~~~---------~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~ 182 (265)
T 1qsg_A 141 GSALLTLSYLGAERAIP---------N-----------------------------YNVMGLAKASLEANVRYMANAMGP 182 (265)
T ss_dssp EEEEEEEECGGGTSBCT---------T-----------------------------TTHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEEcchhhccCCC---------C-----------------------------chHHHHHHHHHHHHHHHHHHHhhh
Confidence 25899999976542110 0 16899999999999887654
Q ss_pred cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCC
Q psy7538 242 LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESE 321 (543)
Q Consensus 242 ~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~ 321 (543)
.++++.+++|+.|.++..... .........+..+. ....+.+++|+|++++.++..... ..
T Consensus 183 ~gi~v~~v~PG~v~t~~~~~~-------~~~~~~~~~~~~~~---------p~~~~~~~~dva~~v~~l~s~~~~---~~ 243 (265)
T 1qsg_A 183 EGVRVNAISAGPIRTLAASGI-------KDFRKMLAHCEAVT---------PIRRTVTIEDVGNSAAFLCSDLSA---GI 243 (265)
T ss_dssp TTEEEEEEEECCCCCTTGGGS-------TTHHHHHHHHHHHS---------TTSSCCCHHHHHHHHHHHTSGGGT---TC
T ss_pred cCeEEEEEEeCCCccchhhcc-------cccHHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHhCchhc---Cc
Confidence 489999999999987643221 11112222222111 112467899999999988865432 13
Q ss_pred CCcEEEeecC
Q psy7538 322 RKSVCNLTSN 331 (543)
Q Consensus 322 ~~~vyni~s~ 331 (543)
.++++++.++
T Consensus 244 tG~~~~vdgG 253 (265)
T 1qsg_A 244 SGEVVHVDGG 253 (265)
T ss_dssp CSCEEEESTT
T ss_pred cCCEEEECCC
Confidence 5789999887
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=2.2e-18 Score=172.44 Aligned_cols=222 Identities=10% Similarity=0.075 Sum_probs=157.0
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+|+||||+|+||++++++|++.|. +|+++.|.... ..+.+.+.. .....++.++.+|+
T Consensus 45 l~gk~vlVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~--~~~~~~~~~-------------~~~~~~~~~~~~Dv 106 (291)
T 3ijr_A 45 LKGKNVLITGGDSGIGRAVSIAFAKEGA---NIAIAYLDEEG--DANETKQYV-------------EKEGVKCVLLPGDL 106 (291)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCHH--HHHHHHHHH-------------HTTTCCEEEEESCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCchH--HHHHHHHHH-------------HhcCCcEEEEECCC
Confidence 5789999999999999999999999986 78888887531 111222111 12235789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC--------cccHHHHHHHHHHHHHHHHHHHHhc-cCCceEEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF--------DEPIKTAVILNTRGTRDMLELSKQM-KNLKCFTY 171 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~ 171 (543)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... ++-.++|+
T Consensus 107 ~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~ 180 (291)
T 3ijr_A 107 SDEQ------HCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIIN 180 (291)
T ss_dssp TSHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEE
Confidence 9875 6666554 68999999996532 2446778999999999999999764 23458999
Q ss_pred EecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEE
Q psy7538 172 ISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCM 247 (543)
Q Consensus 172 vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~ 247 (543)
+||..+..... ....|+.||+..|.+.+..+. +|+.+.
T Consensus 181 isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn 222 (291)
T 3ijr_A 181 TASIVAYEGNE--------------------------------------TLIDYSATKGAIVAFTRSLSQSLVQKGIRVN 222 (291)
T ss_dssp ECCTHHHHCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred EechHhcCCCC--------------------------------------CChhHHHHHHHHHHHHHHHHHHHhhcCEEEE
Confidence 99986543211 016899999999999887654 589999
Q ss_pred EEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEE
Q psy7538 248 ILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCN 327 (543)
Q Consensus 248 IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyn 327 (543)
.++|+.|.++.... ... ....... ........+..++|+|++++.++..... -..|++++
T Consensus 223 ~v~PG~v~T~~~~~-------~~~-~~~~~~~---------~~~~p~~r~~~p~dvA~~v~~L~s~~~~---~itG~~i~ 282 (291)
T 3ijr_A 223 GVAPGPIWTPLIPS-------SFD-EKKVSQF---------GSNVPMQRPGQPYELAPAYVYLASSDSS---YVTGQMIH 282 (291)
T ss_dssp EEEECSBCSTHHHH-------HSC-HHHHHHT---------TTTSTTSSCBCGGGTHHHHHHHHSGGGT---TCCSCEEE
T ss_pred EEeeCCCcCCcccc-------cCC-HHHHHHH---------HccCCCCCCcCHHHHHHHHHHHhCCccC---CCcCCEEE
Confidence 99999887653110 000 0111111 1222345577899999999988765432 13588999
Q ss_pred eecC
Q psy7538 328 LTSN 331 (543)
Q Consensus 328 i~s~ 331 (543)
+.+|
T Consensus 283 vdGG 286 (291)
T 3ijr_A 283 VNGG 286 (291)
T ss_dssp ESSS
T ss_pred ECCC
Confidence 9877
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.5e-18 Score=171.98 Aligned_cols=221 Identities=12% Similarity=0.132 Sum_probs=154.7
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||+|+||++++++|++.|. +|+++.|... .++..+++ .....++.++.+|+
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~~---~~~~~~~~--------------~~~~~~~~~~~~Dv 88 (273)
T 3uf0_A 29 LAGRTAVVTGAGSGIGRAIAHGYARAGA---HVLAWGRTDG---VKEVADEI--------------ADGGGSAEAVVADL 88 (273)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSTH---HHHHHHHH--------------HTTTCEEEEEECCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEcCHHH---HHHHHHHH--------------HhcCCcEEEEEecC
Confidence 6789999999999999999999999987 7888887532 11111221 22235789999999
Q ss_pred CCCCCCCCHHHHHHHhc------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEEE
Q psy7538 108 TQLKLGISEIDKKELID------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFTY 171 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~ 171 (543)
++++ +++.+.+ ++|++||+||.... .+.++..+++|+.|+.++++++... .+..++|+
T Consensus 89 ~d~~------~v~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~ 162 (273)
T 3uf0_A 89 ADLE------GAANVAEELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVT 162 (273)
T ss_dssp TCHH------HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCHH------HHHHHHHHHHhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 9875 4554433 79999999997643 2446678999999999999987431 25579999
Q ss_pred EecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEE
Q psy7538 172 ISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCM 247 (543)
Q Consensus 172 vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~ 247 (543)
+||..+...... ...|+.||+..+.+.+..+. +|+++.
T Consensus 163 isS~~~~~~~~~--------------------------------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn 204 (273)
T 3uf0_A 163 IASMLSFQGGRN--------------------------------------VAAYAASKHAVVGLTRALASEWAGRGVGVN 204 (273)
T ss_dssp ECCGGGTSCCSS--------------------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred EcchHhcCCCCC--------------------------------------ChhHHHHHHHHHHHHHHHHHHHhhcCcEEE
Confidence 999866432110 16899999999998877654 589999
Q ss_pred EEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEE
Q psy7538 248 ILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCN 327 (543)
Q Consensus 248 IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyn 327 (543)
.++|+.|.++...... ...........+ .....+..++|+|++++.++..... -..|++++
T Consensus 205 ~v~PG~v~T~~~~~~~-------~~~~~~~~~~~~---------~p~~r~~~pedva~~v~~L~s~~a~---~itG~~i~ 265 (273)
T 3uf0_A 205 ALAPGYVVTANTAALR-------ADDERAAEITAR---------IPAGRWATPEDMVGPAVFLASDAAS---YVHGQVLA 265 (273)
T ss_dssp EEEECSBCSGGGHHHH-------TSHHHHHHHHHH---------STTSSCBCGGGGHHHHHHHHSGGGT---TCCSCEEE
T ss_pred EEEeCCCcCCchhhcc-------cCHHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHhCchhc---CCcCCEEE
Confidence 9999999776432110 001111222111 1223567899999999988865432 13588999
Q ss_pred eecC
Q psy7538 328 LTSN 331 (543)
Q Consensus 328 i~s~ 331 (543)
+.+|
T Consensus 266 vdGG 269 (273)
T 3uf0_A 266 VDGG 269 (273)
T ss_dssp ESTT
T ss_pred ECcC
Confidence 9887
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.79 E-value=5e-18 Score=167.33 Aligned_cols=222 Identities=14% Similarity=0.161 Sum_probs=153.6
Q ss_pred cCCCEEEEEcCcch-hHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 28 YENKSIFLSGGSGF-LGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 28 ~~~~~VlITGatGF-iG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
+++|+|+||||+|+ ||++++++|++.|+ +|+++.|... ++++.. +.++ .....++.++.+|
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~---~V~~~~r~~~------~~~~~~-----~~l~----~~~~~~~~~~~~D 81 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGA---DVVISDYHER------RLGETR-----DQLA----DLGLGRVEAVVCD 81 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTC---EEEEEESCHH------HHHHHH-----HHHH----TTCSSCEEEEECC
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCC---EEEEecCCHH------HHHHHH-----HHHH----hcCCCceEEEEeC
Confidence 68999999999996 99999999999986 7889988742 222211 1121 1123579999999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc----cCCce
Q psy7538 107 ITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM----KNLKC 168 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~l~~ 168 (543)
+++++ +++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++++... ++-.+
T Consensus 82 l~~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~ 155 (266)
T 3o38_A 82 VTSTE------AVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGV 155 (266)
T ss_dssp TTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEE
T ss_pred CCCHH------HHHHHHHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeE
Confidence 99875 6666654 68999999997542 2446678999999999999988653 24568
Q ss_pred EEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCC
Q psy7538 169 FTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGM 244 (543)
Q Consensus 169 ~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~l 244 (543)
+|++||..+..... + ...|+.||+..|.+.+..+. .++
T Consensus 156 iv~~sS~~~~~~~~---------~-----------------------------~~~Y~~sKaa~~~~~~~la~e~~~~gi 197 (266)
T 3o38_A 156 IVNNASVLGWRAQH---------S-----------------------------QSHYAAAKAGVMALTRCSAIEAVEFGV 197 (266)
T ss_dssp EEEECCGGGTCCCT---------T-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred EEEeCCHHHcCCCC---------C-----------------------------CchHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 99999986653211 0 16899999999999877654 589
Q ss_pred cEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCc
Q psy7538 245 PCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKS 324 (543)
Q Consensus 245 p~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~ 324 (543)
.+.+++|+.|..+..+.. .. .... ...........+.+++|+|++++.++..... ...|+
T Consensus 198 ~v~~v~PG~v~t~~~~~~-------~~-~~~~---------~~~~~~~~~~r~~~~~dva~~i~~l~s~~~~---~~tG~ 257 (266)
T 3o38_A 198 RINAVSPSIARHKFLEKT-------SS-SELL---------DRLASDEAFGRAAEPWEVAATIAFLASDYSS---YMTGE 257 (266)
T ss_dssp EEEEEEECCCCC----------------------------------CCTTSSCCCHHHHHHHHHHHHSGGGT---TCCSC
T ss_pred EEEEEeCCcccchhhhcc-------Cc-HHHH---------HHHHhcCCcCCCCCHHHHHHHHHHHcCcccc---CccCC
Confidence 999999998876532210 00 0011 1112223445678999999999988765432 13588
Q ss_pred EEEeecC
Q psy7538 325 VCNLTSN 331 (543)
Q Consensus 325 vyni~s~ 331 (543)
++++.+|
T Consensus 258 ~i~vdgG 264 (266)
T 3o38_A 258 VVSVSSQ 264 (266)
T ss_dssp EEEESSC
T ss_pred EEEEcCC
Confidence 9999876
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.2e-17 Score=166.86 Aligned_cols=226 Identities=14% Similarity=0.146 Sum_probs=153.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+|+||||+|+||++++++|++.|+ +|+++.|+. +++++.. .....++.++.+|+
T Consensus 14 l~gk~vlVTGas~gIG~~~a~~L~~~G~---~V~~~~r~~------~~~~~~~-------------~~~~~~~~~~~~Dl 71 (291)
T 3rd5_A 14 FAQRTVVITGANSGLGAVTARELARRGA---TVIMAVRDT------RKGEAAA-------------RTMAGQVEVRELDL 71 (291)
T ss_dssp CTTCEEEEECCSSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH-------------TTSSSEEEEEECCT
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHH-------------HHhcCCeeEEEcCC
Confidence 5789999999999999999999999986 899999874 2333221 12235789999999
Q ss_pred CCCCCCCCHHHHHHHhc---CccEEEEcCccCCC-----cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCcccc
Q psy7538 108 TQLKLGISEIDKKELID---NVDIVYHVAATIRF-----DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHP 179 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~---~vd~ViH~AA~v~~-----~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~ 179 (543)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... ..+++|++||..+..
T Consensus 72 ~d~~------~v~~~~~~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~-~~~riv~isS~~~~~ 144 (291)
T 3rd5_A 72 QDLS------SVRRFADGVSGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPR-LTDRVVTVSSMAHWP 144 (291)
T ss_dssp TCHH------HHHHHHHTCCCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGG-EEEEEEEECCGGGTT
T ss_pred CCHH------HHHHHHHhcCCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHhheeEeechhhcc
Confidence 9875 7887776 57999999997542 2456678999999999999999876 557999999986653
Q ss_pred CCCccccccc-CCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cC--CcEEEEecC
Q psy7538 180 SEKVLEERTY-LPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LG--MPCMILRPS 252 (543)
Q Consensus 180 ~~~~i~E~~y-~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~--lp~~IlRps 252 (543)
.....++... ..+..+. ..|+.||+..+.+.+..+. .+ +.+..++||
T Consensus 145 ~~~~~~~~~~~~~~~~~~--------------------------~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG 198 (291)
T 3rd5_A 145 GRINLEDLNWRSRRYSPW--------------------------LAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPG 198 (291)
T ss_dssp CCCCSSCTTCSSSCCCHH--------------------------HHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCS
T ss_pred CCCCcccccccccCCCCc--------------------------chHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCC
Confidence 3211111000 0111111 6899999999998877654 35 999999999
Q ss_pred eeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecC
Q psy7538 253 IVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSN 331 (543)
Q Consensus 253 ~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~ 331 (543)
.|..+.....+ ......... ....+-..+.+|+|++++.++..... .|+.+++.++
T Consensus 199 ~v~T~~~~~~~---------~~~~~~~~~---------~~~~~~~~~~~~~A~~~~~l~~~~~~-----~G~~~~vdgG 254 (291)
T 3rd5_A 199 YSHTNLQGASG---------RKLGDALMS---------AATRVVATDADFGARQTLYAASQDLP-----GDSFVGPRFG 254 (291)
T ss_dssp GGGSCC--------------------------------------CHHHHHHHHHHHHHHHSCCC-----TTCEEEETTS
T ss_pred CCccccccccc---------hHHHHHHHH---------HHHHHHhCCHHHHHHHHHHHHcCCCC-----CCceeCCccc
Confidence 88655332111 001000000 01112234689999999998877533 5778887654
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=7.2e-18 Score=164.28 Aligned_cols=220 Identities=10% Similarity=0.065 Sum_probs=155.7
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|+||++++++|++.|. +|+++.|+.. +++++. +.++ ....++.++.+|+
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~~G~---~v~~~~r~~~------~~~~~~-----~~~~-----~~~~~~~~~~~D~ 63 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALASKGA---TVVGTATSQA------SAEKFE-----NSMK-----EKGFKARGLVLNI 63 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEESSHH------HHHHHH-----HHHH-----HTTCCEEEEECCT
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHH-----HHHH-----hcCCceEEEEecC
Confidence 4689999999999999999999999986 7889998642 222211 1111 1235788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ +++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+... .+..++|
T Consensus 64 ~~~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv 137 (247)
T 3lyl_A 64 SDIE------SIQNFFAEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRII 137 (247)
T ss_dssp TCHH------HHHHHHHHHHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEE
Confidence 9875 6666554 57999999997642 2446678999999999999887542 2456999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... ....|+.||+..+.+.+..+. .++++
T Consensus 138 ~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v 179 (247)
T 3lyl_A 138 SIGSVVGSAGNP--------------------------------------GQTNYCAAKAGVIGFSKSLAYEVASRNITV 179 (247)
T ss_dssp EECCTHHHHCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred EEcchhhccCCC--------------------------------------CcHHHHHHHHHHHHHHHHHHHHHHHcCeEE
Confidence 999986543211 016899999988888776554 58999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
.+++|+.|..+..... .+ ....... .......+.+++|+|++++.++..... ...|+++
T Consensus 180 ~~v~PG~v~t~~~~~~--------~~-~~~~~~~---------~~~~~~~~~~~~dva~~i~~l~s~~~~---~~tG~~i 238 (247)
T 3lyl_A 180 NVVAPGFIATDMTDKL--------TD-EQKSFIA---------TKIPSGQIGEPKDIAAAVAFLASEEAK---YITGQTL 238 (247)
T ss_dssp EEEEECSBCCTTTTTS--------CH-HHHHHHH---------TTSTTCCCBCHHHHHHHHHHHHSGGGT---TCCSCEE
T ss_pred EEEeeCcEecccchhc--------cH-HHHHHHh---------hcCCCCCCcCHHHHHHHHHHHhCCCcC---CccCCEE
Confidence 9999999876643321 11 1112222 122335688999999999988765432 1358899
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
++.+|
T Consensus 239 ~vdgG 243 (247)
T 3lyl_A 239 HVNGG 243 (247)
T ss_dssp EESTT
T ss_pred EECCC
Confidence 99877
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=5.2e-18 Score=169.11 Aligned_cols=220 Identities=14% Similarity=0.152 Sum_probs=151.0
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||||+||++++++|++.|. +|+++.|+. ++++++ .+.++ ....++.++.+|+
T Consensus 42 l~~k~vlITGasggIG~~la~~L~~~G~---~V~~~~r~~------~~~~~~-----~~~l~-----~~~~~~~~~~~Dl 102 (285)
T 2c07_A 42 GENKVALVTGAGRGIGREIAKMLAKSVS---HVICISRTQ------KSCDSV-----VDEIK-----SFGYESSGYAGDV 102 (285)
T ss_dssp CSSCEEEEESTTSHHHHHHHHHHTTTSS---EEEEEESSH------HHHHHH-----HHHHH-----TTTCCEEEEECCT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHcCC---EEEEEcCCH------HHHHHH-----HHHHH-----hcCCceeEEECCC
Confidence 5689999999999999999999999986 788877753 222221 11121 1234688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... .+..++|
T Consensus 103 ~d~~------~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv 176 (285)
T 2c07_A 103 SKKE------EISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRII 176 (285)
T ss_dssp TCHH------HHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEE
Confidence 9875 6666653 68999999997642 2446678999999988887777531 2568999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... ....|+.||+..|.+.+..+. .++++
T Consensus 177 ~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v 218 (285)
T 2c07_A 177 NISSIVGLTGNV--------------------------------------GQANYSSSKAGVIGFTKSLAKELASRNITV 218 (285)
T ss_dssp EECCTHHHHCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred EECChhhccCCC--------------------------------------CCchHHHHHHHHHHHHHHHHHHHHHhCcEE
Confidence 999985542210 016899999999988877654 48999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
.++||+.|.++..... . ........... ....+++++|+|++++.++..... ...++++
T Consensus 219 ~~v~Pg~v~t~~~~~~--------~-~~~~~~~~~~~---------~~~~~~~~~dvA~~~~~l~~~~~~---~~~G~~i 277 (285)
T 2c07_A 219 NAIAPGFISSDMTDKI--------S-EQIKKNIISNI---------PAGRMGTPEEVANLACFLSSDKSG---YINGRVF 277 (285)
T ss_dssp EEEEECSBCC-----C--------C-HHHHHHHHTTC---------TTSSCBCHHHHHHHHHHHHSGGGT---TCCSCEE
T ss_pred EEEEeCcEecCchhhc--------C-HHHHHHHHhhC---------CCCCCCCHHHHHHHHHHHhCCCcC---CCCCCEE
Confidence 9999999977643211 1 11222222211 123478999999999888765432 1257899
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
++.++
T Consensus 278 ~v~gG 282 (285)
T 2c07_A 278 VIDGG 282 (285)
T ss_dssp EESTT
T ss_pred EeCCC
Confidence 98876
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.2e-18 Score=173.07 Aligned_cols=229 Identities=10% Similarity=0.097 Sum_probs=154.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||+|+||++++++|++.|+ +|+++.|+. +++++. .+.++. ...++.++.+|+
T Consensus 20 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~------~~~~~~-----~~~l~~-----~~~~~~~~~~Dv 80 (277)
T 2rhc_B 20 QDSEVALVTGATSGIGLEIARRLGKEGL---RVFVCARGE------EGLRTT-----LKELRE-----AGVEADGRTCDV 80 (277)
T ss_dssp TTSCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHH-----HHHHHH-----TTCCEEEEECCT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHH-----HHHHHh-----cCCceEEEECCC
Confidence 5789999999999999999999999986 788999864 222221 111211 124688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc-----cCCce
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM-----KNLKC 168 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-----~~l~~ 168 (543)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... .+..+
T Consensus 81 ~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~ 154 (277)
T 2rhc_B 81 RSVP------EIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGR 154 (277)
T ss_dssp TCHH------HHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEE
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeE
Confidence 9875 6666654 69999999997532 2345678999999999999998653 14579
Q ss_pred EEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCC
Q psy7538 169 FTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGM 244 (543)
Q Consensus 169 ~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~l 244 (543)
+|++||..+.... | ....|+.||+..|.+.+..+. .++
T Consensus 155 iv~isS~~~~~~~----------~----------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi 196 (277)
T 2rhc_B 155 IVNIASTGGKQGV----------V----------------------------HAAPYSASKHGVVGFTKALGLELARTGI 196 (277)
T ss_dssp EEEECCGGGTSCC----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred EEEECccccccCC----------C----------------------------CCccHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 9999998654221 0 016899999999998887654 479
Q ss_pred cEEEEecCeeeecCCCCCCC-CCCCC-CchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCC
Q psy7538 245 PCMILRPSIVVPIYKEPLPG-WTDNI-NGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322 (543)
Q Consensus 245 p~~IlRps~V~G~~~~p~~g-w~d~~-~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~ 322 (543)
++.++||+.|.++....... +.+.. ........... .......+++++|+|++++.++..... ...
T Consensus 197 ~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~p~~r~~~~~dvA~~v~~l~s~~~~---~~t 264 (277)
T 2rhc_B 197 TVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRIT---------ARVPIGRYVQPSEVAEMVAYLIGPGAA---AVT 264 (277)
T ss_dssp EEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHH---------HHSTTSSCBCHHHHHHHHHHHHSGGGT---TCC
T ss_pred EEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHH---------hcCCCCCCcCHHHHHHHHHHHhCchhc---CCC
Confidence 99999999887653210000 00000 00000111111 111234588999999999988765432 135
Q ss_pred CcEEEeecC
Q psy7538 323 KSVCNLTSN 331 (543)
Q Consensus 323 ~~vyni~s~ 331 (543)
++++++.++
T Consensus 265 G~~~~vdGG 273 (277)
T 2rhc_B 265 AQALNVCGG 273 (277)
T ss_dssp SCEEEESTT
T ss_pred CcEEEECCC
Confidence 789999876
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.79 E-value=5.6e-18 Score=168.84 Aligned_cols=221 Identities=15% Similarity=0.084 Sum_probs=154.2
Q ss_pred cCCCEEEEEcCc--chhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 28 YENKSIFLSGGS--GFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 28 ~~~~~VlITGat--GFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
++||+|+||||+ |+||++++++|++.|+ +|+++.|+.+ .++.++++ ..+. .++.++.+
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~---~V~~~~r~~~---~~~~~~~l---------~~~~-----~~~~~~~~ 78 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHREGA---QLAFTYATPK---LEKRVREI---------AKGF-----GSDLVVKC 78 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTC---EEEEEESSGG---GHHHHHHH---------HHHT-----TCCCEEEC
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCC---EEEEEeCCHH---HHHHHHHH---------HHhc-----CCeEEEEc
Confidence 678999999999 9999999999999986 7889998752 23333332 1111 23678899
Q ss_pred cCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-----------cccHHHHHHHHHHHHHHHHHHHHhc-c-C
Q psy7538 106 DITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-----------DEPIKTAVILNTRGTRDMLELSKQM-K-N 165 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-----------~~~~~~~~~~Nv~gt~~ll~~a~~~-~-~ 165 (543)
|+++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... . +
T Consensus 79 Dl~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 152 (285)
T 2p91_A 79 DVSLDE------DIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR 152 (285)
T ss_dssp CTTCHH------HHHHHHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS
T ss_pred CCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 999875 6666654 68999999997532 1345678999999999999999764 1 2
Q ss_pred CceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----
Q psy7538 166 LKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME---- 241 (543)
Q Consensus 166 l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~---- 241 (543)
-.++|++||..+..... ....|+.||+..+.+.+..+.
T Consensus 153 ~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~ 194 (285)
T 2p91_A 153 NGAIVTLSYYGAEKVVP--------------------------------------HYNVMGIAKAALESTVRYLAYDIAK 194 (285)
T ss_dssp CCEEEEEECGGGTSBCT--------------------------------------TTTHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEEccchhccCCC--------------------------------------CccHHHHHHHHHHHHHHHHHHHhcc
Confidence 26999999975542110 016899999999999887654
Q ss_pred cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCC
Q psy7538 242 LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESE 321 (543)
Q Consensus 242 ~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~ 321 (543)
.|+++.+++|+.|.++..... .........+.... ....+.+++|+|++++.++..... ..
T Consensus 195 ~gi~v~~v~PG~v~t~~~~~~-------~~~~~~~~~~~~~~---------p~~~~~~~~dva~~~~~l~s~~~~---~~ 255 (285)
T 2p91_A 195 HGHRINAISAGPVKTLAAYSI-------TGFHLLMEHTTKVN---------PFGKPITIEDVGDTAVFLCSDWAR---AI 255 (285)
T ss_dssp TTCEEEEEEECCCCCSCC--C-------TTHHHHHHHHHHHS---------TTSSCCCHHHHHHHHHHHTSGGGT---TC
T ss_pred cCcEEEEEEeCcccCchhhcc-------cchHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCCccc---CC
Confidence 489999999999988753221 11112222221111 112367899999999988865332 13
Q ss_pred CCcEEEeecC
Q psy7538 322 RKSVCNLTSN 331 (543)
Q Consensus 322 ~~~vyni~s~ 331 (543)
.|++|++.++
T Consensus 256 tG~~~~vdgg 265 (285)
T 2p91_A 256 TGEVVHVDNG 265 (285)
T ss_dssp CSCEEEESTT
T ss_pred CCCEEEECCC
Confidence 5789999876
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=3.1e-18 Score=166.52 Aligned_cols=207 Identities=11% Similarity=0.081 Sum_probs=141.7
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhC--CCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLE--PNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g--~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
+++|+|+||||+|+||++++++|++.| + +|+++.|+.... +.+.+ . ...++.++.+
T Consensus 1 m~~k~vlItGasggiG~~la~~l~~~g~~~---~V~~~~r~~~~~---~~l~~---------------~-~~~~~~~~~~ 58 (250)
T 1yo6_A 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIR---HIIATARDVEKA---TELKS---------------I-KDSRVHVLPL 58 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCC---EEEEEESSGGGC---HHHHT---------------C-CCTTEEEEEC
T ss_pred CCCCEEEEecCCchHHHHHHHHHHhcCCCc---EEEEEecCHHHH---HHHHh---------------c-cCCceEEEEe
Confidence 467999999999999999999999998 5 899999975321 11211 0 1247899999
Q ss_pred cCCCCCCCCCHHHHHHHhc---------CccEEEEcCccCC-C-------cccHHHHHHHHHHHHHHHHHHHHhc---c-
Q psy7538 106 DITQLKLGISEIDKKELID---------NVDIVYHVAATIR-F-------DEPIKTAVILNTRGTRDMLELSKQM---K- 164 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~---------~vd~ViH~AA~v~-~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~- 164 (543)
|+++++ +++.+++ ++|+|||+||... . .+.++..+++|+.|+.++++++... .
T Consensus 59 D~~~~~------~~~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~ 132 (250)
T 1yo6_A 59 TVTCDK------SLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAA 132 (250)
T ss_dssp CTTCHH------HHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHH
T ss_pred ecCCHH------HHHHHHHHHHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcc
Confidence 999875 6666665 8999999999765 1 2445678999999999999887653 1
Q ss_pred -----C-----CceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHH
Q psy7538 165 -----N-----LKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEG 234 (543)
Q Consensus 165 -----~-----l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~ 234 (543)
+ ..++|++||..+...... +..++.+ ...|+.||+..|.
T Consensus 133 ~~~~~~~~~~~~~~iv~isS~~~~~~~~~--~~~~~~~-----------------------------~~~Y~~sK~a~~~ 181 (250)
T 1yo6_A 133 SKESGDQLSVSRAAVITISSGLGSITDNT--SGSAQFP-----------------------------VLAYRMSKAAINM 181 (250)
T ss_dssp HSSCSSCCCTTTCEEEEECCGGGCSTTCC--STTSSSC-----------------------------BHHHHHHHHHHHH
T ss_pred cccCCCcccCCCcEEEEeccCccccCCcc--cccccCC-----------------------------ccHHHHHHHHHHH
Confidence 2 579999999866433211 1111111 1689999999999
Q ss_pred HHHHHhh----cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHH
Q psy7538 235 LVAECME----LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLF 310 (543)
Q Consensus 235 ~v~~~~~----~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a 310 (543)
+++.++. .++.+.++||+.|.++... . ..+++.+|+|++++.+
T Consensus 182 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~---------------------~------------~~~~~~~~~a~~~~~~ 228 (250)
T 1yo6_A 182 FGRTLAVDLKDDNVLVVNFCPGWVQTNLGG---------------------K------------NAALTVEQSTAELISS 228 (250)
T ss_dssp HHHHHHHHTGGGTCEEEEEECCCC----------------------------------------------HHHHHHHHHH
T ss_pred HHHHHHHHhccCCeEEEEEcCCceecCCCC---------------------C------------CCCCCHHHHHHHHHHH
Confidence 9987665 4899999999987554210 0 1357899999999998
Q ss_pred hhhhcccCCCCCCcEEEee
Q psy7538 311 TWDFLNSKESERKSVCNLT 329 (543)
Q Consensus 311 ~~~~~~~~~~~~~~vyni~ 329 (543)
+..... . ..+..+.+.
T Consensus 229 ~~~~~~-~--~~G~~~~~~ 244 (250)
T 1yo6_A 229 FNKLDN-S--HNGRFFMRN 244 (250)
T ss_dssp HTTCCG-G--GTTCEEETT
T ss_pred Hhcccc-c--CCCeEEEEC
Confidence 876542 1 135555543
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.79 E-value=5.8e-18 Score=170.16 Aligned_cols=235 Identities=13% Similarity=0.131 Sum_probs=144.3
Q ss_pred CCCCCCCccccchhhccCcchhhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcC
Q psy7538 3 NIGGAPDLVTIPKELQALPDRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFES 82 (543)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~ 82 (543)
.||..|..-.-|..+..+.. -++||+|+||||+|+||++++++|++.|. +|+++.|+. ++++++.
T Consensus 8 ~~~~~~~~~~~~~~m~~~m~----~l~gk~vlVTGas~gIG~~la~~l~~~G~---~V~~~~r~~------~~~~~~~-- 72 (301)
T 3tjr_A 8 HMGTLEAQTQGPGSMDGFLS----GFDGRAAVVTGGASGIGLATATEFARRGA---RLVLSDVDQ------PALEQAV-- 72 (301)
T ss_dssp ----------------CCCC----CSTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH--
T ss_pred cccchhhcccCCccchhHHh----ccCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHH--
Confidence 46777777777766654322 26789999999999999999999999986 789999864 2332221
Q ss_pred chhHHHHhhcCcCCCCceEEEEccCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHH
Q psy7538 83 PVFDALKTLRGKSILQKIQVISGDITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVIL 148 (543)
Q Consensus 83 ~~f~~l~~~~~~~~~~~v~~i~gDl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~ 148 (543)
+.++. ...++.++.+|+++++ +++.+++ ++|+|||+||.... .+.++..+++
T Consensus 73 ---~~l~~-----~~~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~v 138 (301)
T 3tjr_A 73 ---NGLRG-----QGFDAHGVVCDVRHLD------EMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDI 138 (301)
T ss_dssp ---HHHHH-----TTCCEEEEECCTTCHH------HHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred ---HHHHh-----cCCceEEEEccCCCHH------HHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHh
Confidence 11211 1347889999999875 6666654 78999999997532 2445678999
Q ss_pred HHHHHHHHHHHHHh----ccCCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCch
Q psy7538 149 NTRGTRDMLELSKQ----MKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNS 224 (543)
Q Consensus 149 Nv~gt~~ll~~a~~----~~~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~ 224 (543)
|+.|+.++++++.. .+.-.++|++||..+..... ....
T Consensus 139 N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~ 180 (301)
T 3tjr_A 139 DLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNA--------------------------------------GLGT 180 (301)
T ss_dssp HTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCT--------------------------------------TBHH
T ss_pred hhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCC--------------------------------------CchH
Confidence 99999999998754 22246999999986653211 0168
Q ss_pred HHHHHHHHHHHHHHHhh----cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHH---HhcCceeEEeecCCccccc
Q psy7538 225 YAYTKCLAEGLVAECME----LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIG---AGKGVIRSMYCKNTGMADF 297 (543)
Q Consensus 225 Y~~tK~~aE~~v~~~~~----~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~---~~~g~~~~~~~~~~~~~d~ 297 (543)
|+.||+..+.+.+..+. .|+.+.+++|+.|..+.... ...... ..........+......++
T Consensus 181 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (301)
T 3tjr_A 181 YGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSN-----------SERIRGADYGMSATPEGAFGPLPTQDES 249 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHH-----------HHHHC----------------------C
T ss_pred HHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccc-----------cccccchhhccccChhhhccccccccCC
Confidence 99999998888876654 58999999999885432110 000000 0000111112223344578
Q ss_pred chHHHHHHHHHHHhhhhc
Q psy7538 298 LPADVAINGVFLFTWDFL 315 (543)
Q Consensus 298 V~vddva~a~i~a~~~~~ 315 (543)
++++|||++++.++....
T Consensus 250 ~~pedvA~~i~~~l~~~~ 267 (301)
T 3tjr_A 250 VSADDVARLTADAILANR 267 (301)
T ss_dssp CCHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHhcCC
Confidence 999999999999987653
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.7e-18 Score=175.73 Aligned_cols=243 Identities=12% Similarity=0.112 Sum_probs=164.7
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC-------CCCCHHHHHHHHhcCchhHHHHhhcCcCCCCc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK-------KGKTPNQRVEELFESPVFDALKTLRGKSILQK 99 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~-------~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~ 99 (543)
-++||+++||||+|+||++++++|++.|. +|+++.|.. ......+.+.+ .+. ....+
T Consensus 24 ~l~gk~vlVTGas~GIG~aia~~la~~G~---~Vv~~~r~~~~~~~~~~~~~~~~~~~~--------~~~-----~~~~~ 87 (322)
T 3qlj_A 24 VVDGRVVIVTGAGGGIGRAHALAFAAEGA---RVVVNDIGVGLDGSPASGGSAAQSVVD--------EIT-----AAGGE 87 (322)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEECCCBCTTSSBTCTTSHHHHHHH--------HHH-----HTTCE
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCcccccccccccHHHHHHHHH--------HHH-----hcCCc
Confidence 36899999999999999999999999986 888888862 11122222211 111 12357
Q ss_pred eEEEEccCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc-c
Q psy7538 100 IQVISGDITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM-K 164 (543)
Q Consensus 100 v~~i~gDl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~ 164 (543)
+.++.+|+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .
T Consensus 88 ~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~ 161 (322)
T 3qlj_A 88 AVADGSNVADWD------QAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWR 161 (322)
T ss_dssp EEEECCCTTSHH------HHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 889999999875 6666655 78999999997642 2446678999999999999988543 0
Q ss_pred -----C---CceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHH
Q psy7538 165 -----N---LKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLV 236 (543)
Q Consensus 165 -----~---l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v 236 (543)
+ -.++|++||..+..... ....|+.||+..+.+.
T Consensus 162 ~~~~~~~~~~g~IV~isS~~~~~~~~--------------------------------------~~~~Y~asKaal~~l~ 203 (322)
T 3qlj_A 162 GLSKAGKAVDGRIINTSSGAGLQGSV--------------------------------------GQGNYSAAKAGIATLT 203 (322)
T ss_dssp HHHHTTCCCCEEEEEECCHHHHHCBT--------------------------------------TCHHHHHHHHHHHHHH
T ss_pred HccccCCCCCcEEEEEcCHHHccCCC--------------------------------------CCccHHHHHHHHHHHH
Confidence 0 14899999985542211 0168999999999988
Q ss_pred HHHhh----cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhh
Q psy7538 237 AECME----LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTW 312 (543)
Q Consensus 237 ~~~~~----~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~ 312 (543)
+..+. +|+.+..++|+ +..+..+. +.... ...+.....++.++|+|++++.++.
T Consensus 204 ~~la~e~~~~gI~vn~v~PG-~~t~~~~~---~~~~~------------------~~~~~~~~~~~~pedva~~v~~L~s 261 (322)
T 3qlj_A 204 LVGAAEMGRYGVTVNAIAPS-ARTRMTET---VFAEM------------------MATQDQDFDAMAPENVSPLVVWLGS 261 (322)
T ss_dssp HHHHHHHGGGTEEEEEEEEC-TTSCCSCC---SCCC--------------------------CCTTCGGGTHHHHHHHTS
T ss_pred HHHHHHhcccCcEEEEecCC-CCCccchh---hhhhh------------------hhccccccCCCCHHHHHHHHHHHhC
Confidence 77654 58999999998 53332211 00000 0011223456789999999998886
Q ss_pred hhcccCCCCCCcEEEeecCCC---------------CcccHHHHHHHHhhhhcCccC
Q psy7538 313 DFLNSKESERKSVCNLTSNKD---------------YKITWQEICDIGKDIVTSKIP 354 (543)
Q Consensus 313 ~~~~~~~~~~~~vyni~s~~~---------------~~~t~~e~~~~i~~~~G~~~p 354 (543)
.... -..|+++++.++.. ...+..|+++.+.+.+|.+.|
T Consensus 262 ~~~~---~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~ 315 (322)
T 3qlj_A 262 AEAR---DVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGKARP 315 (322)
T ss_dssp GGGG---GCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHHSCC
T ss_pred cccc---CCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhccCC
Confidence 5432 13588899887621 123679999999998865433
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=5.5e-18 Score=164.65 Aligned_cols=200 Identities=15% Similarity=0.157 Sum_probs=143.7
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCC---c-CEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEE
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPN---V-KKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVIS 104 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~---v-~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~ 104 (543)
++|+|+||||||+||++++++|++.|+. . .+|+++.|+. ++++++. +.++ ....++.++.
T Consensus 1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~------~~~~~~~-----~~~~-----~~~~~~~~~~ 64 (244)
T 2bd0_A 1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTA------ADLEKIS-----LECR-----AEGALTDTIT 64 (244)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCH------HHHHHHH-----HHHH-----TTTCEEEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCH------HHHHHHH-----HHHH-----ccCCeeeEEE
Confidence 3689999999999999999999999851 0 0688888863 2222211 1111 1235788999
Q ss_pred ccCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCc
Q psy7538 105 GDITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLK 167 (543)
Q Consensus 105 gDl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~ 167 (543)
+|+++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... .+..
T Consensus 65 ~D~~~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 138 (244)
T 2bd0_A 65 ADISDMA------DVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSG 138 (244)
T ss_dssp CCTTSHH------HHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred ecCCCHH------HHHHHHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCC
Confidence 9999875 6666654 69999999997643 2446678999999999999988542 2568
Q ss_pred eEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cC
Q psy7538 168 CFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LG 243 (543)
Q Consensus 168 ~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~ 243 (543)
++|++||..+..... ....|+.||+..|.+++..+. .+
T Consensus 139 ~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~g 180 (244)
T 2bd0_A 139 HIFFITSVAATKAFR--------------------------------------HSSIYCMSKFGQRGLVETMRLYARKCN 180 (244)
T ss_dssp EEEEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred EEEEEecchhcCCCC--------------------------------------CCchhHHHHHHHHHHHHHHHHHhhccC
Confidence 999999986653211 016899999999999866543 58
Q ss_pred CcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhc
Q psy7538 244 MPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFL 315 (543)
Q Consensus 244 lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~ 315 (543)
+++.++||+.|+++.....+. .. ...+++++|+|++++.++....
T Consensus 181 i~v~~v~Pg~v~t~~~~~~~~--------------------------~~-~~~~~~~~dva~~~~~l~~~~~ 225 (244)
T 2bd0_A 181 VRITDVQPGAVYTPMWGKVDD--------------------------EM-QALMMMPEDIAAPVVQAYLQPS 225 (244)
T ss_dssp EEEEEEEECCBCSTTTCCCCS--------------------------TT-GGGSBCHHHHHHHHHHHHTSCT
T ss_pred cEEEEEECCCccchhhhhccc--------------------------cc-cccCCCHHHHHHHHHHHHhCCc
Confidence 999999999998874322100 00 1267899999999998886543
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.1e-18 Score=170.51 Aligned_cols=223 Identities=14% Similarity=0.181 Sum_probs=154.3
Q ss_pred hhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEE
Q psy7538 24 IAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVI 103 (543)
Q Consensus 24 i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i 103 (543)
....++||+|+||||+|+||++++++|++.|. +|+++.|..... ...+..+
T Consensus 8 ~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~---~V~~~~r~~~~~--------------------------~~~~~~~ 58 (269)
T 3vtz_A 8 HMEEFTDKVAIVTGGSSGIGLAVVDALVRYGA---KVVSVSLDEKSD--------------------------VNVSDHF 58 (269)
T ss_dssp --CTTTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESCC--C--------------------------TTSSEEE
T ss_pred cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCchhc--------------------------cCceeEE
Confidence 44578899999999999999999999999987 788898876321 1256788
Q ss_pred EccCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCC
Q psy7538 104 SGDITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNL 166 (543)
Q Consensus 104 ~gDl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l 166 (543)
.+|+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .+.
T Consensus 59 ~~Dv~~~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~ 132 (269)
T 3vtz_A 59 KIDVTNEE------EVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGH 132 (269)
T ss_dssp ECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred EecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC
Confidence 99999875 6666654 78999999997542 2345678999999999999887542 245
Q ss_pred ceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh---cC
Q psy7538 167 KCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME---LG 243 (543)
Q Consensus 167 ~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~---~~ 243 (543)
.++|++||..+..... ....|+.||+..|.+.+..+. .+
T Consensus 133 g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~ 174 (269)
T 3vtz_A 133 GSIINIASVQSYAATK--------------------------------------NAAAYVTSKHALLGLTRSVAIDYAPK 174 (269)
T ss_dssp EEEEEECCGGGTSBCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CEEEEECchhhccCCC--------------------------------------CChhHHHHHHHHHHHHHHHHHHhcCC
Confidence 7999999986653211 016899999999999987665 37
Q ss_pred CcEEEEecCeeeecCCCCCCCCC--CCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCC
Q psy7538 244 MPCMILRPSIVVPIYKEPLPGWT--DNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESE 321 (543)
Q Consensus 244 lp~~IlRps~V~G~~~~p~~gw~--d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~ 321 (543)
+.+..++|+.|.++......... .............. .......+..++|+|++++.++..... -.
T Consensus 175 i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~p~~r~~~pedvA~~v~~L~s~~~~---~i 242 (269)
T 3vtz_A 175 IRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWG---------RQHPMGRIGRPEEVAEVVAFLASDRSS---FI 242 (269)
T ss_dssp EEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHH---------HHSTTSSCBCHHHHHHHHHHHHSGGGT---TC
T ss_pred CEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHH---------hcCCCCCCcCHHHHHHHHHHHhCCccC---CC
Confidence 89999999988765321000000 00000001111111 122334577899999999988765432 13
Q ss_pred CCcEEEeecC
Q psy7538 322 RKSVCNLTSN 331 (543)
Q Consensus 322 ~~~vyni~s~ 331 (543)
.|+++++.+|
T Consensus 243 tG~~i~vdGG 252 (269)
T 3vtz_A 243 TGACLTVDGG 252 (269)
T ss_dssp CSCEEEESTT
T ss_pred cCcEEEECCC
Confidence 5889999887
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.79 E-value=4.2e-18 Score=167.91 Aligned_cols=217 Identities=14% Similarity=0.131 Sum_probs=150.7
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||+|+||++++++|++.|+ +|+++.|.... ..++.++.+|+
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---------------------------~~~~~~~~~Dl 55 (264)
T 2dtx_A 6 LRDKVVIVTGASMGIGRAIAERFVDEGS---KVIDLSIHDPG---------------------------EAKYDHIECDV 55 (264)
T ss_dssp GTTCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESSCCC---------------------------SCSSEEEECCT
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEecCccc---------------------------CCceEEEEecC
Confidence 5789999999999999999999999987 78999987532 23678899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... .+..++|
T Consensus 56 ~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv 129 (264)
T 2dtx_A 56 TNPD------QVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIV 129 (264)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEE
Confidence 9875 6666655 69999999997542 2356778999999999999888652 2457999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-c--CCcEE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-L--GMPCM 247 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~--~lp~~ 247 (543)
++||..+..... + ...|+.||+..|.+.+..+. . .+.+.
T Consensus 130 ~isS~~~~~~~~---------~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~i~vn 171 (264)
T 2dtx_A 130 NISSVQASIITK---------N-----------------------------ASAYVTSKHAVIGLTKSIALDYAPLLRCN 171 (264)
T ss_dssp EECCGGGTSCCT---------T-----------------------------BHHHHHHHHHHHHHHHHHHHHHTTTSEEE
T ss_pred EECCchhccCCC---------C-----------------------------chhHHHHHHHHHHHHHHHHHHhcCCcEEE
Confidence 999986643211 0 16899999999999887765 1 28999
Q ss_pred EEecCeeeecCCCCCCCCCCCCCchH---HHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCc
Q psy7538 248 ILRPSIVVPIYKEPLPGWTDNINGPT---GLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKS 324 (543)
Q Consensus 248 IlRps~V~G~~~~p~~gw~d~~~g~~---~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~ 324 (543)
+++|+.|.++..........+ .... ....... .......+++++|+|++++.++..... ...++
T Consensus 172 ~v~PG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~---------~~~p~~~~~~p~dvA~~v~~l~s~~~~---~~tG~ 238 (264)
T 2dtx_A 172 AVCPATIDTPLVRKAAELEVG-SDPMRIEKKISEWG---------HEHPMQRIGKPQEVASAVAFLASREAS---FITGT 238 (264)
T ss_dssp EEEECSBCSHHHHHHHHHHHC-SCHHHHHHHHHHHH---------HHSTTSSCBCHHHHHHHHHHHHSGGGT---TCCSC
T ss_pred EEEeCCCcCcchhhhhhcccc-cCchhhHHHHHHHH---------hcCCCCCCcCHHHHHHHHHHHhCchhc---CCCCc
Confidence 999998855421100000000 0000 0111111 111224578999999999988765432 13578
Q ss_pred EEEeecC
Q psy7538 325 VCNLTSN 331 (543)
Q Consensus 325 vyni~s~ 331 (543)
++++.++
T Consensus 239 ~i~vdGG 245 (264)
T 2dtx_A 239 CLYVDGG 245 (264)
T ss_dssp EEEESTT
T ss_pred EEEECCC
Confidence 9998876
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.78 E-value=5.6e-18 Score=166.42 Aligned_cols=221 Identities=14% Similarity=0.122 Sum_probs=147.7
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||+|+||++++++|++.|. +|+++.|+. ++++++.+ ....++.++.+|+
T Consensus 7 l~~k~vlITGas~gIG~~~a~~l~~~G~---~V~~~~r~~------~~~~~~~~-------------~~~~~~~~~~~D~ 64 (261)
T 3n74_A 7 LEGKVALITGAGSGFGEGMAKRFAKGGA---KVVIVDRDK------AGAERVAG-------------EIGDAALAVAADI 64 (261)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHHH-------------HHCTTEEEEECCT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEcCCH------HHHHHHHH-------------HhCCceEEEEecC
Confidence 4789999999999999999999999986 789999874 23332211 1124688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC--------cccHHHHHHHHHHHHHHHHHHHHhcc-------C
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF--------DEPIKTAVILNTRGTRDMLELSKQMK-------N 165 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~~-------~ 165 (543)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++...- +
T Consensus 65 ~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~ 138 (261)
T 3n74_A 65 SKEA------DVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQ 138 (261)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCC
Confidence 9875 6666655 68999999997541 24456789999999999988875430 1
Q ss_pred CceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----
Q psy7538 166 LKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME---- 241 (543)
Q Consensus 166 l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~---- 241 (543)
-.++|++||..+..... ....|+.||+..+.+.+..+.
T Consensus 139 ~~~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~~~~~la~e~~~ 180 (261)
T 3n74_A 139 ECVILNVASTGAGRPRP--------------------------------------NLAWYNATKGWVVSVTKALAIELAP 180 (261)
T ss_dssp CEEEEEECCTTTTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred CeEEEEeCchhhcCCCC--------------------------------------CccHHHHHHHHHHHHHHHHHHHhhh
Confidence 34699999986543211 015799999999999877654
Q ss_pred cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCC
Q psy7538 242 LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESE 321 (543)
Q Consensus 242 ~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~ 321 (543)
+++.+..++|+.|.++......+ . ..... ............++.++|+|++++.++..... ..
T Consensus 181 ~gi~v~~v~PG~v~t~~~~~~~~---~--~~~~~---------~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~---~i 243 (261)
T 3n74_A 181 AKIRVVALNPVAGETPLLTTFMG---E--DSEEI---------RKKFRDSIPMGRLLKPDDLAEAAAFLCSPQAS---MI 243 (261)
T ss_dssp GTEEEEEEEEC---------------------------------------CTTSSCCCHHHHHHHHHHHTSGGGT---TC
T ss_pred cCcEEEEEecCcccChhhhhhcc---c--CcHHH---------HHHHhhcCCcCCCcCHHHHHHHHHHHcCCccc---Cc
Confidence 58999999999887764322110 0 00000 01112223345688999999999988864432 13
Q ss_pred CCcEEEeecC
Q psy7538 322 RKSVCNLTSN 331 (543)
Q Consensus 322 ~~~vyni~s~ 331 (543)
.|+++++.++
T Consensus 244 tG~~i~vdgG 253 (261)
T 3n74_A 244 TGVALDVDGG 253 (261)
T ss_dssp CSCEEEESTT
T ss_pred CCcEEEecCC
Confidence 5889999887
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.78 E-value=4.6e-18 Score=167.81 Aligned_cols=215 Identities=13% Similarity=0.128 Sum_probs=150.9
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+|+||||+|+||++++++|++.|. +|++..|..... .....+.+|+
T Consensus 26 l~gk~vlVTGas~gIG~aia~~la~~G~---~V~~~~r~~~~~---------------------------~~~~~~~~Dv 75 (266)
T 3uxy_A 26 FEGKVALVTGAAGGIGGAVVTALRAAGA---RVAVADRAVAGI---------------------------AADLHLPGDL 75 (266)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEECSSCCTTS---------------------------CCSEECCCCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHHHH---------------------------HhhhccCcCC
Confidence 6789999999999999999999999986 788888875321 1123457899
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHH----HhccCCceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELS----KQMKNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~l~~~ 169 (543)
++++ +.+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++ ++. +..++
T Consensus 76 ~~~~------~~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~i 148 (266)
T 3uxy_A 76 REAA------YADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAA-GGGAI 148 (266)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEE
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEE
Confidence 8865 4544443 79999999997642 2446678999999999999998 333 56799
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+...... ...|+.||+..|.+.+..+. .|+.
T Consensus 149 v~isS~~~~~~~~~--------------------------------------~~~Y~asKaa~~~l~~~la~e~~~~gI~ 190 (266)
T 3uxy_A 149 VNVASCWGLRPGPG--------------------------------------HALYCLTKAALASLTQCMGMDHAPQGIR 190 (266)
T ss_dssp EEECCSBTTBCCTT--------------------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred EEECCHHhCCCCCC--------------------------------------ChHHHHHHHHHHHHHHHHHHHhhhcCcE
Confidence 99999866432110 16899999999999887654 5899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
+.+++|+.|.++...... ......+........ .......+..++|+|++++.++..... -..|++
T Consensus 191 vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~~---------~~~p~~r~~~pedvA~~v~~L~s~~~~---~itG~~ 256 (266)
T 3uxy_A 191 INAVCPNEVNTPMLRTGF--AKRGFDPDRAVAELG---------RTVPLGRIAEPEDIADVVLFLASDAAR---YLCGSL 256 (266)
T ss_dssp EEEEEESSBCCHHHHHHH--HHTTCCHHHHHHHHH---------TTSTTSSCBCHHHHHHHHHHHHSGGGT---TCCSCE
T ss_pred EEEEeeCCCcchHhhhhh--hcccccchHHHHHHH---------hcCCCCCCcCHHHHHHHHHHHhCchhc---CCcCCE
Confidence 999999988765321000 000001111112222 222345678899999999988866532 135889
Q ss_pred EEeecC
Q psy7538 326 CNLTSN 331 (543)
Q Consensus 326 yni~s~ 331 (543)
+++.+|
T Consensus 257 i~vdGG 262 (266)
T 3uxy_A 257 VEVNGG 262 (266)
T ss_dssp EEESTT
T ss_pred EEECcC
Confidence 999887
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=9.1e-18 Score=165.37 Aligned_cols=212 Identities=13% Similarity=0.158 Sum_probs=147.5
Q ss_pred hhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEE
Q psy7538 24 IAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVI 103 (543)
Q Consensus 24 i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i 103 (543)
....+++|+|+||||+|+||++++++|++.|....+|+++.|+..... .++++. . ...++.++
T Consensus 15 ~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~---~~~~l~---------~-----~~~~~~~~ 77 (267)
T 1sny_A 15 VPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAK---ELEDLA---------K-----NHSNIHIL 77 (267)
T ss_dssp -----CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCH---HHHHHH---------H-----HCTTEEEE
T ss_pred cccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhH---HHHHhh---------c-----cCCceEEE
Confidence 445578999999999999999999999999822228999999865432 222221 1 12478899
Q ss_pred EccCCCCCCCCCHHHHHHHhc---------CccEEEEcCccCC-C-------cccHHHHHHHHHHHHHHHHHHHHhc---
Q psy7538 104 SGDITQLKLGISEIDKKELID---------NVDIVYHVAATIR-F-------DEPIKTAVILNTRGTRDMLELSKQM--- 163 (543)
Q Consensus 104 ~gDl~~~~lgls~~~~~~l~~---------~vd~ViH~AA~v~-~-------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 163 (543)
.+|+++++ +++.+++ ++|+|||+||... . .+.++..+++|+.|+.++++++...
T Consensus 78 ~~Dl~~~~------~v~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 151 (267)
T 1sny_A 78 EIDLRNFD------AYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKK 151 (267)
T ss_dssp ECCTTCGG------GHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EecCCChH------HHHHHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhh
Confidence 99999986 6666665 7999999999765 1 2445678999999999999988653
Q ss_pred -------cC----CceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHH
Q psy7538 164 -------KN----LKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLA 232 (543)
Q Consensus 164 -------~~----l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~a 232 (543)
+. ..++|++||..+...... ..+ ...|+.||+..
T Consensus 152 ~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~------~~~-----------------------------~~~Y~~sK~a~ 196 (267)
T 1sny_A 152 AAKANESQPMGVGRAAIINMSSILGSIQGNT------DGG-----------------------------MYAYRTSKSAL 196 (267)
T ss_dssp HHHHTTTSCSSTTTCEEEEECCGGGCSTTCC------SCC-----------------------------CHHHHHHHHHH
T ss_pred cccccccccccCCCceEEEEecccccccCCC------CCC-----------------------------chHHHHHHHHH
Confidence 10 468999999866432110 001 15899999999
Q ss_pred HHHHHHHhh----cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHH
Q psy7538 233 EGLVAECME----LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVF 308 (543)
Q Consensus 233 E~~v~~~~~----~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i 308 (543)
|.+++..+. .++++.++||+.|-.+... . ...+..+++|+.++
T Consensus 197 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-----------~----------------------~~~~~~~~~a~~~~ 243 (267)
T 1sny_A 197 NAATKSLSVDLYPQRIMCVSLHPGWVKTDMGG-----------S----------------------SAPLDVPTSTGQIV 243 (267)
T ss_dssp HHHHHHHHHHHGGGTCEEEEECCCSBCSTTTC-----------T----------------------TCSBCHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCcEEEEeCCcceecCCCC-----------C----------------------CCCCCHHHHHHHHH
Confidence 999887654 4899999999987543210 0 12467899999999
Q ss_pred HHhhhhcccCCCCCCcEEEee
Q psy7538 309 LFTWDFLNSKESERKSVCNLT 329 (543)
Q Consensus 309 ~a~~~~~~~~~~~~~~vyni~ 329 (543)
.++..... . ..+..+++.
T Consensus 244 ~~~~~~~~-~--~~G~~~~~~ 261 (267)
T 1sny_A 244 QTISKLGE-K--QNGGFVNYD 261 (267)
T ss_dssp HHHHHCCG-G--GTTCEECTT
T ss_pred HHHHhcCc-C--CCCcEEccC
Confidence 98876432 1 235555543
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.78 E-value=7.2e-18 Score=165.53 Aligned_cols=226 Identities=15% Similarity=0.120 Sum_probs=151.9
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+|+++||||+|+||++++++|++.|+ +|+++.|+... +.+++. .+.++ ....++.++.+|+++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~----~~~~~~-----~~~~~-----~~~~~~~~~~~Dv~~ 64 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGF---DIAVADLPQQE----EQAAET-----IKLIE-----AADQKAVFVGLDVTD 64 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTC---EEEEEECGGGH----HHHHHH-----HHHHH-----TTTCCEEEEECCTTC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCcch----HHHHHH-----HHHHH-----hcCCcEEEEEccCCC
Confidence 68999999999999999999999987 78888887531 002211 11111 123478899999998
Q ss_pred CCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCC-ceEEE
Q psy7538 110 LKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNL-KCFTY 171 (543)
Q Consensus 110 ~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l-~~~V~ 171 (543)
++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .+. .++|+
T Consensus 65 ~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~ 138 (258)
T 3a28_C 65 KA------NFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIIN 138 (258)
T ss_dssp HH------HHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEE
T ss_pred HH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 75 6666654 79999999997542 2446678999999999999888652 245 79999
Q ss_pred EecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEE
Q psy7538 172 ISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCM 247 (543)
Q Consensus 172 vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~ 247 (543)
+||..+..... ....|+.||+..|.+.+..+. .++.+.
T Consensus 139 isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn 180 (258)
T 3a28_C 139 AASIAAIQGFP--------------------------------------ILSAYSTTKFAVRGLTQAAAQELAPKGHTVN 180 (258)
T ss_dssp ECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred ECcchhccCCC--------------------------------------CchhHHHHHHHHHHHHHHHHHHHHhhCeEEE
Confidence 99986643211 016899999999998877654 589999
Q ss_pred EEecCeeeecCCCCCCCCCCCC---Cch--HHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCC
Q psy7538 248 ILRPSIVVPIYKEPLPGWTDNI---NGP--TGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322 (543)
Q Consensus 248 IlRps~V~G~~~~p~~gw~d~~---~g~--~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~ 322 (543)
+++|+.|..+.... +.... .++ ......... ......+...+|+|++++.++..... -..
T Consensus 181 ~v~PG~v~t~~~~~---~~~~~~~~~~~~~~~~~~~~~~---------~~p~~r~~~p~dvA~~v~~l~s~~~~---~~t 245 (258)
T 3a28_C 181 AYAPGIVGTGMWEQ---IDAELSKINGKPIGENFKEYSS---------SIALGRPSVPEDVAGLVSFLASENSN---YVT 245 (258)
T ss_dssp EEEECCBCSHHHHH---HHHHHHHHHCCCTTHHHHHHHT---------TCTTSSCBCHHHHHHHHHHHHSGGGT---TCC
T ss_pred EEECCccCChhhhh---hhhhhccccCCchHHHHHHHHh---------cCCCCCccCHHHHHHHHHHHhCcccC---CCC
Confidence 99999885542110 00000 000 001111111 11123478899999999988865432 135
Q ss_pred CcEEEeecC
Q psy7538 323 KSVCNLTSN 331 (543)
Q Consensus 323 ~~vyni~s~ 331 (543)
|+++++.++
T Consensus 246 G~~i~vdGG 254 (258)
T 3a28_C 246 GQVMLVDGG 254 (258)
T ss_dssp SCEEEESSS
T ss_pred CCEEEECCC
Confidence 789998876
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.1e-18 Score=172.78 Aligned_cols=224 Identities=13% Similarity=0.103 Sum_probs=154.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||+|+||++++++|++.|+ +|.+..|..... ..+.+.+.. .....++.++.+|+
T Consensus 47 l~~k~vlVTGas~GIG~aia~~la~~G~---~V~~~~~~~~~~-~~~~~~~~~-------------~~~~~~~~~~~~Dv 109 (294)
T 3r3s_A 47 LKDRKALVTGGDSGIGRAAAIAYAREGA---DVAINYLPAEEE-DAQQVKALI-------------EECGRKAVLLPGDL 109 (294)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEECCGGGHH-HHHHHHHHH-------------HHTTCCEEECCCCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCcchh-HHHHHHHHH-------------HHcCCcEEEEEecC
Confidence 5789999999999999999999999997 788887763211 112222111 11235788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC--------cccHHHHHHHHHHHHHHHHHHHHhc-cCCceEEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF--------DEPIKTAVILNTRGTRDMLELSKQM-KNLKCFTY 171 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~ 171 (543)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .+-.++|+
T Consensus 110 ~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~ 183 (294)
T 3r3s_A 110 SDES------FARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIIT 183 (294)
T ss_dssp TSHH------HHHHHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEE
Confidence 9875 5655553 78999999997431 2446778999999999999999764 22249999
Q ss_pred EecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEE
Q psy7538 172 ISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCM 247 (543)
Q Consensus 172 vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~ 247 (543)
+||..+...... ...|+.||+..|.+.+..+. .|+++.
T Consensus 184 isS~~~~~~~~~--------------------------------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn 225 (294)
T 3r3s_A 184 TSSIQAYQPSPH--------------------------------------LLDYAATKAAILNYSRGLAKQVAEKGIRVN 225 (294)
T ss_dssp ECCGGGTSCCTT--------------------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred ECChhhccCCCC--------------------------------------chHHHHHHHHHHHHHHHHHHHHhhcCeEEE
Confidence 999866542110 16899999999999877654 589999
Q ss_pred EEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEE
Q psy7538 248 ILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCN 327 (543)
Q Consensus 248 IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyn 327 (543)
.++|+.|.++.... +. ... ..... .........+...+|+|++++.++..... -..|++++
T Consensus 226 ~v~PG~v~t~~~~~--~~----~~~-~~~~~---------~~~~~p~~r~~~p~dvA~~v~~L~s~~~~---~itG~~i~ 286 (294)
T 3r3s_A 226 IVAPGPIWTALQIS--GG----QTQ-DKIPQ---------FGQQTPMKRAGQPAELAPVYVYLASQESS---YVTAEVHG 286 (294)
T ss_dssp EEEECSBCSHHHHT--TT----SCG-GGSTT---------TTTTSTTSSCBCGGGGHHHHHHHHSGGGT---TCCSCEEE
T ss_pred EEecCcCccccccc--cC----CCH-HHHHH---------HHhcCCCCCCcCHHHHHHHHHHHhCcccc---CCCCCEEE
Confidence 99999998764110 00 000 00000 11122234567789999999888765432 13588999
Q ss_pred eecC
Q psy7538 328 LTSN 331 (543)
Q Consensus 328 i~s~ 331 (543)
+.+|
T Consensus 287 vdGG 290 (294)
T 3r3s_A 287 VCGG 290 (294)
T ss_dssp ESTT
T ss_pred ECCC
Confidence 9887
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.78 E-value=3e-18 Score=168.88 Aligned_cols=232 Identities=14% Similarity=0.161 Sum_probs=157.5
Q ss_pred hhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEE
Q psy7538 24 IAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVI 103 (543)
Q Consensus 24 i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i 103 (543)
+...++||+++||||+|+||++++++|++.|. +|+++.|+. ++++++. +.++ ....++.++
T Consensus 5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~------~~~~~~~-----~~~~-----~~~~~~~~~ 65 (264)
T 3ucx_A 5 MGGLLTDKVVVISGVGPALGTTLARRCAEQGA---DLVLAARTV------ERLEDVA-----KQVT-----DTGRRALSV 65 (264)
T ss_dssp --CTTTTCEEEEESCCTTHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH-----HHHH-----HTTCCEEEE
T ss_pred cCCCcCCcEEEEECCCcHHHHHHHHHHHHCcC---EEEEEeCCH------HHHHHHH-----HHHH-----hcCCcEEEE
Confidence 44568899999999999999999999999987 788998864 2332221 1121 123578999
Q ss_pred EccCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC--------cccHHHHHHHHHHHHHHHHHHHHhc---cC
Q psy7538 104 SGDITQLKLGISEIDKKELID-------NVDIVYHVAATIRF--------DEPIKTAVILNTRGTRDMLELSKQM---KN 165 (543)
Q Consensus 104 ~gDl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~ 165 (543)
.+|+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .+
T Consensus 66 ~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~ 139 (264)
T 3ucx_A 66 GTDITDDA------QVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK 139 (264)
T ss_dssp ECCTTCHH------HHHHHHHHHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT
T ss_pred EcCCCCHH------HHHHHHHHHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC
Confidence 99999875 6666654 68999999987421 2446678999999999999887542 12
Q ss_pred CceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----
Q psy7538 166 LKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME---- 241 (543)
Q Consensus 166 l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~---- 241 (543)
.++|++||..+..... ....|+.||+..+.+.+..+.
T Consensus 140 -g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~~~~~la~e~~~ 180 (264)
T 3ucx_A 140 -GAVVNVNSMVVRHSQA--------------------------------------KYGAYKMAKSALLAMSQTLATELGE 180 (264)
T ss_dssp -CEEEEECCGGGGCCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -CEEEEECcchhccCCC--------------------------------------ccHHHHHHHHHHHHHHHHHHHHhCc
Confidence 6999999986643211 015899999999998877654
Q ss_pred cCCcEEEEecCeeeecCCCCCCCCCC--CCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCC
Q psy7538 242 LGMPCMILRPSIVVPIYKEPLPGWTD--NINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKE 319 (543)
Q Consensus 242 ~~lp~~IlRps~V~G~~~~p~~gw~d--~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~ 319 (543)
+|+++..++|+.|.++.......... ....+........ .......+..++|+|++++.++.....
T Consensus 181 ~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~p~~r~~~p~dvA~~v~~L~s~~~~--- 248 (264)
T 3ucx_A 181 KGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAA---------AGSDLKRLPTEDEVASAILFMASDLAS--- 248 (264)
T ss_dssp TTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHH---------TTSSSSSCCBHHHHHHHHHHHHSGGGT---
T ss_pred cCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHh---------ccCCcccCCCHHHHHHHHHHHcCcccc---
Confidence 58999999999987763221000000 0000011111111 223345678999999999888765432
Q ss_pred CCCCcEEEeecC
Q psy7538 320 SERKSVCNLTSN 331 (543)
Q Consensus 320 ~~~~~vyni~s~ 331 (543)
-..|+++++.++
T Consensus 249 ~itG~~i~vdGG 260 (264)
T 3ucx_A 249 GITGQALDVNCG 260 (264)
T ss_dssp TCCSCEEEESTT
T ss_pred CCCCCEEEECCC
Confidence 135889999877
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=5.5e-18 Score=165.13 Aligned_cols=222 Identities=16% Similarity=0.136 Sum_probs=153.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||+|+||++++++|++.|+ +|+++.|+. ++++++ . ...++.++.+|+
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~------~~~~~~--------------~-~~~~~~~~~~D~ 59 (246)
T 2ag5_A 4 LDGKVIILTAAAQGIGQAAALAFAREGA---KVIATDINE------SKLQEL--------------E-KYPGIQTRVLDV 59 (246)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHGGG--------------G-GSTTEEEEECCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHH--------------H-hccCceEEEeeC
Confidence 5789999999999999999999999986 788998863 222221 1 113688999999
Q ss_pred CCCCCCCCHHHHHHHh---cCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEEEEec
Q psy7538 108 TQLKLGISEIDKKELI---DNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFTYIST 174 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~---~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~vST 174 (543)
++++ +++.+. .++|+|||+||.... .+.++..+++|+.|+.++++++... .+..++|++||
T Consensus 60 ~~~~------~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS 133 (246)
T 2ag5_A 60 TKKK------QIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSS 133 (246)
T ss_dssp TCHH------HHHHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred CCHH------HHHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEec
Confidence 9875 555553 479999999997643 2446678999999999999987531 25689999999
Q ss_pred CccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEEEe
Q psy7538 175 AYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMILR 250 (543)
Q Consensus 175 ~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~IlR 250 (543)
..+..... .+ ...|+.||+..|.+.+..+. +++++.++|
T Consensus 134 ~~~~~~~~--------~~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~ 176 (246)
T 2ag5_A 134 VASSVKGV--------VN-----------------------------RCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVC 176 (246)
T ss_dssp SBTTTBCC--------TT-----------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred hHhCcCCC--------CC-----------------------------CccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEe
Confidence 86542210 00 16899999999999887654 489999999
Q ss_pred cCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeec
Q psy7538 251 PSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTS 330 (543)
Q Consensus 251 ps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s 330 (543)
|+.|+++..... ......+.......... .....++..+|+|++++.++..... -..++++++.+
T Consensus 177 Pg~v~t~~~~~~---~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dvA~~v~~l~s~~~~---~~tG~~i~vdg 241 (246)
T 2ag5_A 177 PGTVDTPSLQER---IQARGNPEEARNDFLKR---------QKTGRFATAEEIAMLCVYLASDESA---YVTGNPVIIDG 241 (246)
T ss_dssp ESCEECHHHHHH---HHHSSSHHHHHHHHHHT---------CTTSSCEEHHHHHHHHHHHHSGGGT---TCCSCEEEECT
T ss_pred eCcCcCcchhhh---hhcccCcHHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHhCcccc---CCCCCEEEECC
Confidence 999988642110 00000011111111111 1112478899999999988765432 13578998877
Q ss_pred C
Q psy7538 331 N 331 (543)
Q Consensus 331 ~ 331 (543)
+
T Consensus 242 G 242 (246)
T 2ag5_A 242 G 242 (246)
T ss_dssp T
T ss_pred C
Confidence 6
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.78 E-value=1e-17 Score=164.84 Aligned_cols=221 Identities=14% Similarity=0.173 Sum_probs=152.8
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
.+|+++||||+|+||++++++|++.|+ +|+++.|.... ..+.+.+.. .....++.++.+|++
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~~~G~---~v~~~~~~~~~--~~~~~~~~~-------------~~~~~~~~~~~~Dl~ 67 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLLAKGY---SVTVTYHSDTT--AMETMKETY-------------KDVEERLQFVQADVT 67 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSCHH--HHHHHHHHT-------------GGGGGGEEEEECCTT
T ss_pred ccCEEEEeCCCchhHHHHHHHHHHCCC---EEEEEcCCChH--HHHHHHHHH-------------HhcCCceEEEEecCC
Confidence 468999999999999999999999987 78888776521 122222221 122357899999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCccC--C---C----cccHHHHHHHHHHHHHHHHHHH----HhccCCce
Q psy7538 109 QLKLGISEIDKKELID-------NVDIVYHVAATI--R---F----DEPIKTAVILNTRGTRDMLELS----KQMKNLKC 168 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~-------~vd~ViH~AA~v--~---~----~~~~~~~~~~Nv~gt~~ll~~a----~~~~~l~~ 168 (543)
+++ +++.+++ ++|+|||+||.. . + .+.++..+++|+.|+.++++++ ++. +..+
T Consensus 68 ~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~ 140 (264)
T 3i4f_A 68 KKE------DLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQ-NFGR 140 (264)
T ss_dssp SHH------HHHHHHHHHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEE
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-CCCe
Confidence 875 6666655 789999999932 1 1 2445678999999999999998 444 5689
Q ss_pred EEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCC
Q psy7538 169 FTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGM 244 (543)
Q Consensus 169 ~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~l 244 (543)
+|++||..+..... .+ ....|+.||+..+.+.+..+. .++
T Consensus 141 iv~iss~~~~~~~~--------~~----------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi 184 (264)
T 3i4f_A 141 IINYGFQGADSAPG--------WI----------------------------YRSAFAAAKVGLVSLTKTVAYEEAEYGI 184 (264)
T ss_dssp EEEECCTTGGGCCC--------CT----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred EEEEeechhcccCC--------CC----------------------------CCchhHHHHHHHHHHHHHHHHHhhhcCc
Confidence 99999874331110 00 016899999999998876654 589
Q ss_pred cEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCc
Q psy7538 245 PCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKS 324 (543)
Q Consensus 245 p~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~ 324 (543)
++.+++|+.|.++..... ......... .......+..++|+|++++.++..... -..|+
T Consensus 185 ~v~~v~PG~v~t~~~~~~---------~~~~~~~~~---------~~~p~~r~~~~~dva~~v~~l~s~~~~---~itG~ 243 (264)
T 3i4f_A 185 TANMVCPGDIIGEMKEAT---------IQEARQLKE---------HNTPIGRSGTGEDIARTISFLCEDDSD---MITGT 243 (264)
T ss_dssp EEEEEEECCCCGGGGSCC---------HHHHHHC-----------------CCCCHHHHHHHHHHHHSGGGT---TCCSC
T ss_pred EEEEEccCCccCccchhc---------cHHHHHHHh---------hcCCCCCCcCHHHHHHHHHHHcCcccC---CCCCc
Confidence 999999999988754321 111111111 112223567899999999988876432 13588
Q ss_pred EEEeecC
Q psy7538 325 VCNLTSN 331 (543)
Q Consensus 325 vyni~s~ 331 (543)
++++.+|
T Consensus 244 ~i~vdGG 250 (264)
T 3i4f_A 244 IIEVTGA 250 (264)
T ss_dssp EEEESCS
T ss_pred EEEEcCc
Confidence 9999887
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=4.4e-18 Score=167.90 Aligned_cols=226 Identities=14% Similarity=0.088 Sum_probs=147.3
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHh-hCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILR-LEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~-~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++|+|+||||+|+||++++++|++ .|+ +|+++.|... ++++.. +.+.. ...++.++.+|+
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~---~V~~~~r~~~------~~~~~~-----~~l~~-----~~~~~~~~~~Dl 63 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSG---DVVLTARDVT------RGQAAV-----QQLQA-----EGLSPRFHQLDI 63 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSS---EEEEEESSHH------HHHHHH-----HHHHH-----TTCCCEEEECCT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCC---eEEEEeCChH------HHHHHH-----HHHHh-----cCCeeEEEECCC
Confidence 579999999999999999999999 886 7899998642 222211 11111 124688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc-cCCceEEEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM-KNLKCFTYI 172 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~v 172 (543)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... ....++|++
T Consensus 64 ~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~ 137 (276)
T 1wma_A 64 DDLQ------SIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNV 137 (276)
T ss_dssp TCHH------HHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEE
Confidence 9865 6666665 79999999997532 2445678999999999999999875 112499999
Q ss_pred ecCccccC--C-Cc-ccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCC-chHHHHHHHHHHHHHHHhh------
Q psy7538 173 STAYCHPS--E-KV-LEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFP-NSYAYTKCLAEGLVAECME------ 241 (543)
Q Consensus 173 ST~y~~~~--~-~~-i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p-n~Y~~tK~~aE~~v~~~~~------ 241 (543)
||..+... . .+ ..+.....+.+.+.+........++......+ ...+| +.|+.||+..|.+++.++.
T Consensus 138 sS~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~ 215 (276)
T 1wma_A 138 SSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQ--KEGWPSSAYGVTKIGVTVLSRIHARKLSEQR 215 (276)
T ss_dssp CCHHHHHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTT--TTTCCSCHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CChhhhcccccCChhHHhhccccccchhhhhhhhhhhhhhhcccccc--cCCCccchhHHHHHHHHHHHHHHHHHhhccc
Confidence 99855421 0 00 11111112233332222222111111111111 11122 7999999999988876554
Q ss_pred --cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhh
Q psy7538 242 --LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDF 314 (543)
Q Consensus 242 --~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~ 314 (543)
.++.+.+++|+.|.++... + ..+++++|+|++++.++..+
T Consensus 216 ~~~~i~v~~v~PG~v~t~~~~---------------------~------------~~~~~~~~~a~~~~~l~~~~ 257 (276)
T 1wma_A 216 KGDKILLNACCPGWVRTDMAG---------------------P------------KATKSPEEGAETPVYLALLP 257 (276)
T ss_dssp TTSCCEEEEEECCSBCSTTTC---------------------T------------TCSBCHHHHTHHHHHHHSCC
T ss_pred CCCceEEEEecCCccccCcCC---------------------c------------cccCChhHhhhhHhhhhcCc
Confidence 2799999999988554211 0 13678999999999888644
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.78 E-value=7.2e-18 Score=166.87 Aligned_cols=223 Identities=13% Similarity=0.127 Sum_probs=147.8
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
.++|+|+||||+|+||++++++|++.|. +|.++.+.. .++++++. +.+. ....++.++.+|+
T Consensus 24 ~~~k~vlITGas~gIG~a~a~~l~~~G~---~V~~~~~~~-----~~~~~~~~-----~~~~-----~~~~~~~~~~~Dl 85 (272)
T 4e3z_A 24 SDTPVVLVTGGSRGIGAAVCRLAARQGW---RVGVNYAAN-----REAADAVV-----AAIT-----ESGGEAVAIPGDV 85 (272)
T ss_dssp CCSCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSC-----HHHHHHHH-----HHHH-----HTTCEEEEEECCT
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEcCCC-----hhHHHHHH-----HHHH-----hcCCcEEEEEcCC
Confidence 4678999999999999999999999987 676664432 12222211 1111 1235789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC--------cccHHHHHHHHHHHHHHHHHHHHhc------cCC
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF--------DEPIKTAVILNTRGTRDMLELSKQM------KNL 166 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~------~~l 166 (543)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... ++-
T Consensus 86 ~~~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~ 159 (272)
T 4e3z_A 86 GNAA------DIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQG 159 (272)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCC
T ss_pred CCHH------HHHHHHHHHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCC
Confidence 9875 6666554 68999999997643 2345678999999999999888653 124
Q ss_pred ceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----c
Q psy7538 167 KCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----L 242 (543)
Q Consensus 167 ~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~ 242 (543)
.++|++||..+..... . ....|+.||+..|.+.+..+. .
T Consensus 160 g~iv~isS~~~~~~~~--------~-----------------------------~~~~Y~asKaa~~~~~~~la~e~~~~ 202 (272)
T 4e3z_A 160 GAIVNVSSMAAILGSA--------T-----------------------------QYVDYAASKAAIDTFTIGLAREVAAE 202 (272)
T ss_dssp EEEEEECCTHHHHCCT--------T-----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred CEEEEEcchHhccCCC--------C-----------------------------CcchhHHHHHHHHHHHHHHHHHHHHc
Confidence 6899999986542210 0 015799999999998877655 4
Q ss_pred CCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCC
Q psy7538 243 GMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322 (543)
Q Consensus 243 ~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~ 322 (543)
|+++.+++|+.|.++.... ......... .........+..++|+|++++.++..... ...
T Consensus 203 gi~v~~v~PG~v~t~~~~~--------~~~~~~~~~---------~~~~~~~~~~~~~edvA~~i~~l~s~~~~---~~t 262 (272)
T 4e3z_A 203 GIRVNAVRPGIIETDLHAS--------GGLPDRARE---------MAPSVPMQRAGMPEEVADAILYLLSPSAS---YVT 262 (272)
T ss_dssp TEEEEEEEECSBC-----------------------------------CCTTSSCBCHHHHHHHHHHHHSGGGT---TCC
T ss_pred CcEEEEEecCCCcCCcccc--------cCChHHHHH---------HhhcCCcCCCcCHHHHHHHHHHHhCCccc---ccc
Confidence 8999999999997764321 000001111 11122233466799999999988865432 135
Q ss_pred CcEEEeecC
Q psy7538 323 KSVCNLTSN 331 (543)
Q Consensus 323 ~~vyni~s~ 331 (543)
|++|++.+|
T Consensus 263 G~~i~vdgG 271 (272)
T 4e3z_A 263 GSILNVSGG 271 (272)
T ss_dssp SCEEEESTT
T ss_pred CCEEeecCC
Confidence 889999876
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=1.3e-17 Score=165.11 Aligned_cols=226 Identities=9% Similarity=0.105 Sum_probs=152.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|+||++++++|++.|+ +|+++.|+. +++++.. +.++. ...++.++.+|+
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~------~~~~~~~-----~~~~~-----~~~~~~~~~~D~ 79 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGLGA---RVYTCSRNE------KELDECL-----EIWRE-----KGLNVEGSVCDL 79 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH-----HHHHH-----TTCCEEEEECCT
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHH-----HHHHh-----cCCceEEEECCC
Confidence 5789999999999999999999999986 789999864 2232211 11211 124688999999
Q ss_pred CCCCCCCCHHHHHHHh--------cCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceE
Q psy7538 108 TQLKLGISEIDKKELI--------DNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~--------~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~ 169 (543)
++++ +++.++ .++|++||+||.... .+.++..+++|+.|+.++++++... .+..++
T Consensus 80 ~~~~------~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~i 153 (273)
T 1ae1_A 80 LSRT------ERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNV 153 (273)
T ss_dssp TCHH------HHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEE
Confidence 9875 666655 579999999997532 2456678999999999999988421 246799
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+..... ....|+.||+..|.+.+..+. .|++
T Consensus 154 v~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~ 195 (273)
T 1ae1_A 154 IFLSSIAGFSALP--------------------------------------SVSLYSASKGAINQMTKSLACEWAKDNIR 195 (273)
T ss_dssp EEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred EEEcCHhhcCCCC--------------------------------------CcchhHHHHHHHHHHHHHHHHHHhhcCcE
Confidence 9999987653211 016899999999999877654 4899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
+.+++|+.|.++...... ................ .....+.+++|+|++++.++..... ...+++
T Consensus 196 v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~---------~p~~r~~~p~dvA~~v~~l~s~~~~---~~tG~~ 260 (273)
T 1ae1_A 196 VNSVAPGVILTPLVETAI---KKNPHQKEEIDNFIVK---------TPMGRAGKPQEVSALIAFLCFPAAS---YITGQI 260 (273)
T ss_dssp EEEEEECSBC----------------CHHHHHHHHHH---------STTCSCBCHHHHHHHHHHHHSGGGT---TCCSCE
T ss_pred EEEEEeCCCcCchhhhhh---hcccCcHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCcccc---CcCCCE
Confidence 999999999887532110 0000001111111111 0112477899999999888754332 135889
Q ss_pred EEeecC
Q psy7538 326 CNLTSN 331 (543)
Q Consensus 326 yni~s~ 331 (543)
+++.++
T Consensus 261 i~vdGG 266 (273)
T 1ae1_A 261 IWADGG 266 (273)
T ss_dssp EEESTT
T ss_pred EEECCC
Confidence 998876
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.8e-17 Score=160.09 Aligned_cols=221 Identities=15% Similarity=0.187 Sum_probs=151.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||||+||++++++|++.|+ +|+++.|.. .++++++. +.++. ...++.++.+|+
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~---~V~~~~r~~-----~~~~~~~~-----~~~~~-----~~~~~~~~~~D~ 63 (246)
T 2uvd_A 2 LKGKVALVTGASRGIGRAIAIDLAKQGA---NVVVNYAGN-----EQKANEVV-----DEIKK-----LGSDAIAVRADV 63 (246)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSC-----HHHHHHHH-----HHHHH-----TTCCEEEEECCT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCC-----HHHHHHHH-----HHHHh-----cCCcEEEEEcCC
Confidence 4689999999999999999999999987 788888843 12222211 11211 124688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++.+++... .+..++|
T Consensus 64 ~~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv 137 (246)
T 2uvd_A 64 ANAE------DVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIV 137 (246)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEE
Confidence 9875 6666655 79999999997542 2346678999999977777665431 2568999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... ....|+.||+..+.+.+..+. .++++
T Consensus 138 ~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v 179 (246)
T 2uvd_A 138 NIASVVGVTGNP--------------------------------------GQANYVAAKAGVIGLTKTSAKELASRNITV 179 (246)
T ss_dssp EECCTHHHHCCT--------------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred EECCHHhcCCCC--------------------------------------CCchHHHHHHHHHHHHHHHHHHhhhcCeEE
Confidence 999985532210 016899999998888766543 58999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
.+++|+.|.++.....+ + .......... ....+++++|+|++++.++..... -..++++
T Consensus 180 ~~v~Pg~v~t~~~~~~~--------~-~~~~~~~~~~---------p~~~~~~~~dvA~~~~~l~s~~~~---~~tG~~~ 238 (246)
T 2uvd_A 180 NAIAPGFIATDMTDVLD--------E-NIKAEMLKLI---------PAAQFGEAQDIANAVTFFASDQSK---YITGQTL 238 (246)
T ss_dssp EEEEECSBGGGCSSCCC--------T-THHHHHHHTC---------TTCSCBCHHHHHHHHHHHHSGGGT---TCCSCEE
T ss_pred EEEEeccccCcchhhcC--------H-HHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCchhc---CCCCCEE
Confidence 99999999765432111 0 0111111111 123478999999999988765432 1257899
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
++.++
T Consensus 239 ~vdgG 243 (246)
T 2uvd_A 239 NVDGG 243 (246)
T ss_dssp EESTT
T ss_pred EECcC
Confidence 98876
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.3e-17 Score=163.57 Aligned_cols=224 Identities=13% Similarity=0.120 Sum_probs=154.5
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
-++||+++||||+|+||++++++|++.|. +|+++.|+.. ++++.. +.+ .....++.++.+|
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~------~~~~~~-----~~~-----~~~~~~~~~~~~D 63 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGA---RVVITGRTKE------KLEEAK-----LEI-----EQFPGQILTVQMD 63 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCHH------HHHHHH-----HHH-----CCSTTCEEEEECC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHH-----HHH-----HhcCCcEEEEEcc
Confidence 35789999999999999999999999986 7889988742 222211 111 2233578999999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHh----ccCCce
Q psy7538 107 ITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQ----MKNLKC 168 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~----~~~l~~ 168 (543)
+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++.+++.. .++..+
T Consensus 64 v~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~ 137 (257)
T 3imf_A 64 VRNTD------DIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGN 137 (257)
T ss_dssp TTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCE
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcE
Confidence 99875 6666654 68999999996432 244667899999999999998833 224579
Q ss_pred EEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-----cC
Q psy7538 169 FTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-----LG 243 (543)
Q Consensus 169 ~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-----~~ 243 (543)
+|++||..+..... ....|+.||+..+.+.+..+. +|
T Consensus 138 iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~~g 179 (257)
T 3imf_A 138 IINMVATYAWDAGP--------------------------------------GVIHSAAAKAGVLAMTKTLAVEWGRKYG 179 (257)
T ss_dssp EEEECCGGGGSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEECchhhccCCC--------------------------------------CcHHHHHHHHHHHHHHHHHHHHhccccC
Confidence 99999986643211 016899999999888876542 48
Q ss_pred CcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCC
Q psy7538 244 MPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERK 323 (543)
Q Consensus 244 lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~ 323 (543)
+++..++|+.|.++..... .|.+. .+...... ......+..++|+|++++.++..... -..|
T Consensus 180 Irvn~v~PG~v~t~~~~~~-~~~~~-----~~~~~~~~---------~~p~~r~~~pedvA~~v~~L~s~~~~---~itG 241 (257)
T 3imf_A 180 IRVNAIAPGPIERTGGADK-LWISE-----EMAKRTIQ---------SVPLGRLGTPEEIAGLAYYLCSDEAA---YING 241 (257)
T ss_dssp CEEEEEEECCBSSCCCC-------------CCSHHHHT---------TSTTCSCBCHHHHHHHHHHHHSGGGT---TCCS
T ss_pred eEEEEEEECCCcCCcchhh-cccCH-----HHHHHHHh---------cCCCCCCcCHHHHHHHHHHHcCchhc---CccC
Confidence 9999999999977643210 01100 00011111 11223578899999999988865432 1358
Q ss_pred cEEEeecC
Q psy7538 324 SVCNLTSN 331 (543)
Q Consensus 324 ~vyni~s~ 331 (543)
+++++.++
T Consensus 242 ~~i~vdGG 249 (257)
T 3imf_A 242 TCMTMDGG 249 (257)
T ss_dssp CEEEESTT
T ss_pred CEEEECCC
Confidence 89999887
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=7.4e-18 Score=165.62 Aligned_cols=231 Identities=13% Similarity=0.113 Sum_probs=151.5
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||+|+||++++++|++.|+ +|+++.|+... .++++ .+.+.... ..++.++.+|+
T Consensus 2 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~-----~~~~~-----~~~~~~~~----~~~~~~~~~D~ 64 (260)
T 1x1t_A 2 LKGKVAVVTGSTSGIGLGIATALAAQGA---DIVLNGFGDAA-----EIEKV-----RAGLAAQH----GVKVLYDGADL 64 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEECCSCHH-----HHHHH-----HHHHHHHH----TSCEEEECCCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCC---EEEEEeCCcch-----HHHHH-----HHHHHhcc----CCcEEEEECCC
Confidence 4689999999999999999999999987 78888886521 02221 11111110 23688899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .+..++|
T Consensus 65 ~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv 138 (260)
T 1x1t_A 65 SKGE------AVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRII 138 (260)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 9875 6666654 69999999996542 2446678999999999998888532 2568999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... ....|+.||+..|.+.+..+. .++++
T Consensus 139 ~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v 180 (260)
T 1x1t_A 139 NIASAHGLVASA--------------------------------------NKSAYVAAKHGVVGFTKVTALETAGQGITA 180 (260)
T ss_dssp EECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEE
T ss_pred EECcHHhCcCCC--------------------------------------CCchHHHHHHHHHHHHHHHHHHhccCCEEE
Confidence 999986643211 016899999999999877654 48999
Q ss_pred EEEecCeeeecCCCCC-CCCCCCCCc--hHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCC
Q psy7538 247 MILRPSIVVPIYKEPL-PGWTDNING--PTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERK 323 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~-~gw~d~~~g--~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~ 323 (543)
.+++|+.|.++..... +.+... .+ +..... .+.........+.+++|+|++++.++..... ...+
T Consensus 181 ~~v~Pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~--------~~~~~~~p~~~~~~p~dva~~~~~l~s~~~~---~~tG 248 (260)
T 1x1t_A 181 NAICPGWVRTPLVEKQISALAEK-NGVDQETAAR--------ELLSEKQPSLQFVTPEQLGGTAVFLASDAAA---QITG 248 (260)
T ss_dssp EEEEECCBCC---------------------------------CHHHHCTTCCCBCHHHHHHHHHHHHSGGGT---TCCS
T ss_pred EEEeecCccCchHHHhhhhhccc-cCCchHHHHH--------HHhhccCCCCCCcCHHHHHHHHHHHhChhhc---CCCC
Confidence 9999999977643211 000000 00 000000 0000111224578999999999988865432 1357
Q ss_pred cEEEeecC
Q psy7538 324 SVCNLTSN 331 (543)
Q Consensus 324 ~vyni~s~ 331 (543)
+++++.++
T Consensus 249 ~~~~vdgG 256 (260)
T 1x1t_A 249 TTVSVDGG 256 (260)
T ss_dssp CEEEESTT
T ss_pred CEEEECCC
Confidence 89998876
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.9e-18 Score=169.63 Aligned_cols=226 Identities=11% Similarity=0.089 Sum_probs=155.3
Q ss_pred chhhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceE
Q psy7538 22 DRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQ 101 (543)
Q Consensus 22 ~~i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~ 101 (543)
+++..-+++|+++||||+|+||++++++|++.|. +|+++.|... +++++. +.+.. ...++.
T Consensus 20 ~~m~~~l~~k~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~~------~~~~~~-----~~~~~-----~~~~~~ 80 (270)
T 3ftp_A 20 GSMDKTLDKQVAIVTGASRGIGRAIALELARRGA---MVIGTATTEA------GAEGIG-----AAFKQ-----AGLEGR 80 (270)
T ss_dssp ---CCTTTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSHH------HHHHHH-----HHHHH-----HTCCCE
T ss_pred cccccCCCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHH-----HHHHh-----cCCcEE
Confidence 3344557899999999999999999999999987 8889988642 222211 11111 124678
Q ss_pred EEEccCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---c
Q psy7538 102 VISGDITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---K 164 (543)
Q Consensus 102 ~i~gDl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 164 (543)
.+.+|+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .
T Consensus 81 ~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~ 154 (270)
T 3ftp_A 81 GAVLNVNDAT------AVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKA 154 (270)
T ss_dssp EEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 8999999875 6666655 79999999996542 2456778999999999999988532 2
Q ss_pred CCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh---
Q psy7538 165 NLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME--- 241 (543)
Q Consensus 165 ~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~--- 241 (543)
+-.++|++||..+..... ....|+.||+..+.+.+..+.
T Consensus 155 ~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~ 196 (270)
T 3ftp_A 155 RGGRIVNITSVVGSAGNP--------------------------------------GQVNYAAAKAGVAGMTRALAREIG 196 (270)
T ss_dssp TCEEEEEECCHHHHHCCT--------------------------------------TBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred CCCEEEEECchhhCCCCC--------------------------------------CchhHHHHHHHHHHHHHHHHHHHh
Confidence 446899999986542211 016899999988888776554
Q ss_pred -cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCC
Q psy7538 242 -LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKES 320 (543)
Q Consensus 242 -~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~ 320 (543)
.|+++.+++|+.|..+..... +......... ......+..++|+|++++.++..... -
T Consensus 197 ~~gI~vn~v~PG~v~T~~~~~~---------~~~~~~~~~~---------~~p~~r~~~pedvA~~v~~L~s~~~~---~ 255 (270)
T 3ftp_A 197 SRGITVNCVAPGFIDTDMTKGL---------PQEQQTALKT---------QIPLGRLGSPEDIAHAVAFLASPQAG---Y 255 (270)
T ss_dssp GGTEEEEEEEECSBCSHHHHHS---------CHHHHHHHHT---------TCTTCSCBCHHHHHHHHHHHHSGGGT---T
T ss_pred hhCeEEEEEEeCCCcCcchhhc---------CHHHHHHHHh---------cCCCCCCCCHHHHHHHHHHHhCCCcC---C
Confidence 589999999998865532110 0111111111 12234578899999999888754432 1
Q ss_pred CCCcEEEeecC
Q psy7538 321 ERKSVCNLTSN 331 (543)
Q Consensus 321 ~~~~vyni~s~ 331 (543)
..|+++++.++
T Consensus 256 itG~~i~vdGG 266 (270)
T 3ftp_A 256 ITGTTLHVNGG 266 (270)
T ss_dssp CCSCEEEESTT
T ss_pred ccCcEEEECCC
Confidence 35889999887
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.78 E-value=6.9e-18 Score=167.45 Aligned_cols=243 Identities=13% Similarity=0.084 Sum_probs=157.4
Q ss_pred CCCCCCCccccchhhccCcchhhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcC
Q psy7538 3 NIGGAPDLVTIPKELQALPDRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFES 82 (543)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~ 82 (543)
.+|+.|+...-|..+..+. .. -++||+++||||+|+||++++++|++.|. +|+++.|+... .+.+.+
T Consensus 8 ~~~~~~~~~~g~~~m~~~~--~~-~l~gk~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~---~~~~~~---- 74 (276)
T 3r1i_A 8 HMGTLEAQTQGPGSMSVLD--LF-DLSGKRALITGASTGIGKKVALAYAEAGA---QVAVAARHSDA---LQVVAD---- 74 (276)
T ss_dssp ---------------CGGG--GG-CCTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESSGGG---GHHHHH----
T ss_pred cccceeccccCCCCccccc--cc-CCCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHH----
Confidence 4677777766665544321 11 26789999999999999999999999987 88999996532 122211
Q ss_pred chhHHHHhhcCcCCCCceEEEEccCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHH
Q psy7538 83 PVFDALKTLRGKSILQKIQVISGDITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVIL 148 (543)
Q Consensus 83 ~~f~~l~~~~~~~~~~~v~~i~gDl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~ 148 (543)
.+ .....++.++.+|+++++ +++.+++ ++|++||+||.... .+.++..+++
T Consensus 75 ----~~-----~~~~~~~~~~~~Dl~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 139 (276)
T 3r1i_A 75 ----EI-----AGVGGKALPIRCDVTQPD------QVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDT 139 (276)
T ss_dssp ----HH-----HHTTCCCEEEECCTTCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred ----HH-----HhcCCeEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 11 112247889999999875 6766665 79999999997643 2445678899
Q ss_pred HHHHHHHHHHHHHhc---cC-CceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCch
Q psy7538 149 NTRGTRDMLELSKQM---KN-LKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNS 224 (543)
Q Consensus 149 Nv~gt~~ll~~a~~~---~~-l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~ 224 (543)
|+.|+.++++++... .+ -.++|++||..+..... +.+ ...
T Consensus 140 N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~-------~~~-----------------------------~~~ 183 (276)
T 3r1i_A 140 NVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINI-------PQQ-----------------------------VSH 183 (276)
T ss_dssp HTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCC-------SSC-----------------------------CHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCC-------CCC-----------------------------cch
Confidence 999999999887652 12 36899999986643211 001 168
Q ss_pred HHHHHHHHHHHHHHHhh----cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchH
Q psy7538 225 YAYTKCLAEGLVAECME----LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPA 300 (543)
Q Consensus 225 Y~~tK~~aE~~v~~~~~----~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~v 300 (543)
|+.||+..+.+.+..+. +++.+..++|+.|..+..++.+. ........ .....+...
T Consensus 184 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~----------~~~~~~~~---------~p~~r~~~p 244 (276)
T 3r1i_A 184 YCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLAD----------YHALWEPK---------IPLGRMGRP 244 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGG----------GHHHHGGG---------STTSSCBCG
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchH----------HHHHHHhc---------CCCCCCcCH
Confidence 99999999999887654 58999999999997764432211 11111111 112346778
Q ss_pred HHHHHHHHHHhhhhcccCCCCCCcEEEeecC
Q psy7538 301 DVAINGVFLFTWDFLNSKESERKSVCNLTSN 331 (543)
Q Consensus 301 ddva~a~i~a~~~~~~~~~~~~~~vyni~s~ 331 (543)
+|+|++++.++..... -..|+++++.++
T Consensus 245 edvA~~v~fL~s~~~~---~itG~~i~vdGG 272 (276)
T 3r1i_A 245 EELTGLYLYLASAASS---YMTGSDIVIDGG 272 (276)
T ss_dssp GGSHHHHHHHHSGGGT---TCCSCEEEESTT
T ss_pred HHHHHHHHHHcCcccc---CccCcEEEECcC
Confidence 9999999888765432 135889999876
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.7e-17 Score=164.78 Aligned_cols=223 Identities=12% Similarity=0.132 Sum_probs=154.5
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|+||++++++|++.|. +|+++.|+. ++++++.+ ....++.++.+|+
T Consensus 25 l~~k~vlVTGas~GIG~aia~~l~~~G~---~V~~~~r~~------~~~~~~~~-------------~~~~~~~~~~~Dv 82 (277)
T 4dqx_A 25 LNQRVCIVTGGGSGIGRATAELFAKNGA---YVVVADVNE------DAAVRVAN-------------EIGSKAFGVRVDV 82 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSH------HHHHHHHH-------------HHCTTEEEEECCT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHHH-------------HhCCceEEEEecC
Confidence 5789999999999999999999999987 788888864 23322211 1124688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .+..++|
T Consensus 83 ~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv 156 (277)
T 4dqx_A 83 SSAK------DAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSII 156 (277)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEE
Confidence 9875 6666655 78999999996532 2456678999999999998888542 2456999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+...... ...|+.||+..+.+.+..+. .|+.+
T Consensus 157 ~isS~~~~~~~~~--------------------------------------~~~Y~asKaa~~~l~~~la~e~~~~gi~v 198 (277)
T 4dqx_A 157 NTTSYTATSAIAD--------------------------------------RTAYVASKGAISSLTRAMAMDHAKEGIRV 198 (277)
T ss_dssp EECCGGGTSCCTT--------------------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred EECchhhCcCCCC--------------------------------------ChhHHHHHHHHHHHHHHHHHHhhhcCeEE
Confidence 9999866432110 16899999999999877654 58999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
.+++|+.|..+..... + .....+........ .......+..++|+|++++.++..... -..|+++
T Consensus 199 n~v~PG~v~T~~~~~~--~-~~~~~~~~~~~~~~---------~~~~~~r~~~pedvA~~v~~L~s~~~~---~itG~~i 263 (277)
T 4dqx_A 199 NAVAPGTIDSPYFTKI--F-AEAKDPAKLRSDFN---------ARAVMDRMGTAEEIAEAMLFLASDRSR---FATGSIL 263 (277)
T ss_dssp EEEEECSBCCHHHHHH--H-HTCSCHHHHHHHHH---------TTSTTCSCBCHHHHHHHHHHHHSGGGT---TCCSCEE
T ss_pred EEEeeCcCcCchhhhh--c-ccccchhHHHHHHH---------hcCcccCCcCHHHHHHHHHHHhCCccC---CCcCCEE
Confidence 9999998866521000 0 00001111111111 122334577899999999988865432 1358899
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
++.+|
T Consensus 264 ~vdGG 268 (277)
T 4dqx_A 264 TVDGG 268 (277)
T ss_dssp EESSS
T ss_pred EECCc
Confidence 99887
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=8.9e-18 Score=164.42 Aligned_cols=219 Identities=10% Similarity=0.063 Sum_probs=149.9
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||+|+||++++++|++.|+ +|+++.|+. ++++++.+ . ...++.++.+|+
T Consensus 4 l~~k~vlVTGas~giG~~ia~~l~~~G~---~V~~~~r~~------~~~~~~~~-----~--------~~~~~~~~~~D~ 61 (253)
T 1hxh_A 4 LQGKVALVTGGASGVGLEVVKLLLGEGA---KVAFSDINE------AAGQQLAA-----E--------LGERSMFVRHDV 61 (253)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEECSCH------HHHHHHHH-----H--------HCTTEEEECCCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHHH-----H--------cCCceEEEEccC
Confidence 5789999999999999999999999987 788888863 23322211 0 124688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHH----hccCCceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSK----QMKNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~----~~~~l~~~ 169 (543)
++++ +++.+++ .+|+|||+||.... .+.++..+++|+.|+.++.+.+. +. + .++
T Consensus 62 ~~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~-g~i 133 (253)
T 1hxh_A 62 SSEA------DWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET-G-GSI 133 (253)
T ss_dssp TCHH------HHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-C-EEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHc-C-CEE
Confidence 9875 5665554 47999999997542 24466789999998877766553 33 4 899
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----c--C
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----L--G 243 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~--~ 243 (543)
|++||..+..... + ...|+.||+..|.+.+..+. + +
T Consensus 134 v~isS~~~~~~~~---------~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~~~g 175 (253)
T 1hxh_A 134 INMASVSSWLPIE---------Q-----------------------------YAGYSASKAAVSALTRAAALSCRKQGYA 175 (253)
T ss_dssp EEECCGGGTSCCT---------T-----------------------------BHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred EEEcchhhcCCCC---------C-----------------------------CccHHHHHHHHHHHHHHHHHHhhhcCCC
Confidence 9999986653211 0 15899999999999887654 3 8
Q ss_pred CcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHH-HhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCC
Q psy7538 244 MPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIG-AGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322 (543)
Q Consensus 244 lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~-~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~ 322 (543)
+++.++||+.|+++..... .+. ..... ..... .......+..++|+|++++.++..... ...
T Consensus 176 i~v~~v~Pg~v~t~~~~~~---~~~-----~~~~~~~~~~~------~~~p~~~~~~~~dvA~~~~~l~s~~~~---~~t 238 (253)
T 1hxh_A 176 IRVNSIHPDGIYTPMMQAS---LPK-----GVSKEMVLHDP------KLNRAGRAYMPERIAQLVLFLASDESS---VMS 238 (253)
T ss_dssp EEEEEEEESEECCHHHHHH---SCT-----TCCHHHHBCBT------TTBTTCCEECHHHHHHHHHHHHSGGGT---TCC
T ss_pred eEEEEEEeCCccCchhhhc---cch-----hhhHHHHhhhh------ccCccCCCCCHHHHHHHHHHHcCcccc---CCC
Confidence 9999999999988642110 000 00000 11100 011123478899999999988865432 135
Q ss_pred CcEEEeecC
Q psy7538 323 KSVCNLTSN 331 (543)
Q Consensus 323 ~~vyni~s~ 331 (543)
++++++.++
T Consensus 239 G~~~~vdgG 247 (253)
T 1hxh_A 239 GSELHADNS 247 (253)
T ss_dssp SCEEEESSS
T ss_pred CcEEEECCC
Confidence 789998876
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=9.8e-18 Score=164.69 Aligned_cols=221 Identities=14% Similarity=0.083 Sum_probs=154.3
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEE-ecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLL-MRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l-~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++|+++||||+|+||++++++|++.|. +|+++ .|+. +++++.. +.+ .....++.++.+|+
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~---~vv~~~~r~~------~~~~~~~-----~~~-----~~~~~~~~~~~~Dv 63 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGY---NIVINYARSK------KAALETA-----EEI-----EKLGVKVLVVKANV 63 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEESSCH------HHHHHHH-----HHH-----HTTTCCEEEEECCT
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCC---EEEEEcCCCH------HHHHHHH-----HHH-----HhcCCcEEEEEcCC
Confidence 689999999999999999999999997 67775 5643 2222211 111 12235789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .+-.++|
T Consensus 64 ~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv 137 (258)
T 3oid_A 64 GQPA------KIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIV 137 (258)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 9875 6666654 57999999986432 2345668999999999999988432 2457999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... ....|+.||+..+.+.+..+. +++.+
T Consensus 138 ~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~v 179 (258)
T 3oid_A 138 SISSLGSIRYLE--------------------------------------NYTTVGVSKAALEALTRYLAVELSPKQIIV 179 (258)
T ss_dssp EEEEGGGTSBCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEE
T ss_pred EECchhhCCCCC--------------------------------------CcHHHHHHHHHHHHHHHHHHHHHhhcCcEE
Confidence 999986542211 016899999999999887665 48999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
..++|+.|..+..... ............. .....+..++|+|++++.++..... -..|+++
T Consensus 180 n~v~PG~v~T~~~~~~-------~~~~~~~~~~~~~---------~p~~r~~~~~dva~~v~~L~s~~~~---~itG~~i 240 (258)
T 3oid_A 180 NAVSGGAIDTDALKHF-------PNREDLLEDARQN---------TPAGRMVEIKDMVDTVEFLVSSKAD---MIRGQTI 240 (258)
T ss_dssp EEEEECCBCSGGGGGC-------TTHHHHHHHHHHH---------CTTSSCBCHHHHHHHHHHHTSSTTT---TCCSCEE
T ss_pred EEEeeCCCcChhhhhc-------ccCHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCcccC---CccCCEE
Confidence 9999999977643321 1111222222221 1224578899999999988865432 1358899
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
++.+|
T Consensus 241 ~vdGG 245 (258)
T 3oid_A 241 IVDGG 245 (258)
T ss_dssp EESTT
T ss_pred EECCC
Confidence 99887
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.9e-17 Score=161.71 Aligned_cols=219 Identities=10% Similarity=0.026 Sum_probs=145.5
Q ss_pred CcchhhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCc
Q psy7538 20 LPDRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQK 99 (543)
Q Consensus 20 ~~~~i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~ 99 (543)
.+.+...-++||+|+||||+|+||++++++|++.|+ +|+++.|+. +.++++ .+
T Consensus 9 ~~~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~---~V~~~~r~~------~~~~~~------------------~~ 61 (249)
T 1o5i_A 9 HHHHMELGIRDKGVLVLAASRGIGRAVADVLSQEGA---EVTICARNE------ELLKRS------------------GH 61 (249)
T ss_dssp -------CCTTCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHT------------------CS
T ss_pred hhhhHHhccCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEcCCH------HHHHhh------------------CC
Confidence 335566678899999999999999999999999986 789999864 222111 24
Q ss_pred eEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHH----HHhccCCce
Q psy7538 100 IQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLEL----SKQMKNLKC 168 (543)
Q Consensus 100 v~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~----a~~~~~l~~ 168 (543)
+.++ +|+ ..+ .+.+...+.++|+|||+||.... .+.++..+++|+.|+.++.+. +++. +..+
T Consensus 62 ~~~~-~D~-~~~----~~~~~~~~~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~ 134 (249)
T 1o5i_A 62 RYVV-CDL-RKD----LDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK-GWGR 134 (249)
T ss_dssp EEEE-CCT-TTC----HHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEE
T ss_pred eEEE-eeH-HHH----HHHHHHHhcCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcE
Confidence 6667 999 222 12233333489999999996542 234567899999997766554 4444 5689
Q ss_pred EEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCC
Q psy7538 169 FTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGM 244 (543)
Q Consensus 169 ~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~l 244 (543)
+|++||..+...... ...|+.||+..+.+.+..+. .|+
T Consensus 135 iv~isS~~~~~~~~~--------------------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi 176 (249)
T 1o5i_A 135 IVAITSFSVISPIEN--------------------------------------LYTSNSARMALTGFLKTLSFEVAPYGI 176 (249)
T ss_dssp EEEECCGGGTSCCTT--------------------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred EEEEcchHhcCCCCC--------------------------------------CchHHHHHHHHHHHHHHHHHHhhhcCe
Confidence 999999876532110 16899999999988876554 589
Q ss_pred cEEEEecCeeeecCCCCCCCCCCCCCchHHHHH-HHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCC
Q psy7538 245 PCMILRPSIVVPIYKEPLPGWTDNINGPTGLLI-GAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERK 323 (543)
Q Consensus 245 p~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~-~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~ 323 (543)
++.++||+.|.++..... . + .... ..... .....+++++|+|++++.++..... ...+
T Consensus 177 ~v~~v~Pg~v~t~~~~~~-------~-~-~~~~~~~~~~---------~p~~~~~~~~dvA~~i~~l~s~~~~---~~tG 235 (249)
T 1o5i_A 177 TVNCVAPGWTETERVKEL-------L-S-EEKKKQVESQ---------IPMRRMAKPEEIASVVAFLCSEKAS---YLTG 235 (249)
T ss_dssp EEEEEEECSBCCTTHHHH-------S-C-HHHHHHHHTT---------STTSSCBCHHHHHHHHHHHHSGGGT---TCCS
T ss_pred EEEEEeeCCCccCccccc-------c-h-hhHHHHHHhc---------CCCCCCcCHHHHHHHHHHHcCcccc---CCCC
Confidence 999999999877632100 0 0 1111 11111 1224578999999999888765432 1358
Q ss_pred cEEEeecC
Q psy7538 324 SVCNLTSN 331 (543)
Q Consensus 324 ~vyni~s~ 331 (543)
+++++.++
T Consensus 236 ~~~~vdgG 243 (249)
T 1o5i_A 236 QTIVVDGG 243 (249)
T ss_dssp CEEEESTT
T ss_pred CEEEECCC
Confidence 89999876
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.4e-17 Score=166.56 Aligned_cols=220 Identities=12% Similarity=0.094 Sum_probs=155.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+|+||||+|+||++++++|++.|. +|+++.|+.... +.+.+ .++ .....++.++.+|+
T Consensus 39 l~~k~vlVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~~---~~~~~--------~l~----~~~~~~~~~~~~Dv 100 (293)
T 3rih_A 39 LSARSVLVTGGTKGIGRGIATVFARAGA---NVAVAARSPREL---SSVTA--------ELG----ELGAGNVIGVRLDV 100 (293)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSGGGG---HHHHH--------HHT----TSSSSCEEEEECCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCHHHH---HHHHH--------HHH----hhCCCcEEEEEEeC
Confidence 6789999999999999999999999987 889999875321 11111 111 11125789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHH----hccCCceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSK----QMKNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~----~~~~l~~~ 169 (543)
++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++++++. +. +..++
T Consensus 101 ~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~i 173 (293)
T 3rih_A 101 SDPG------SCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTAS-GRGRV 173 (293)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH-SSCEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEE
Confidence 9875 5555544 68999999997532 24567789999999999999884 33 56799
Q ss_pred EEEecCccc-cCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCC
Q psy7538 170 TYISTAYCH-PSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGM 244 (543)
Q Consensus 170 V~vST~y~~-~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~l 244 (543)
|++||..+. ... | ....|+.||+..+.+.+..+. +|+
T Consensus 174 V~isS~~~~~~~~----------~----------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI 215 (293)
T 3rih_A 174 ILTSSITGPVTGY----------P----------------------------GWSHYGASKAAQLGFMRTAAIELAPRGV 215 (293)
T ss_dssp EEECCSBTTTBBC----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTC
T ss_pred EEEeChhhccCCC----------C----------------------------CCHHHHHHHHHHHHHHHHHHHHHhhhCe
Confidence 999998653 110 0 016899999999998887654 589
Q ss_pred cEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCc
Q psy7538 245 PCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKS 324 (543)
Q Consensus 245 p~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~ 324 (543)
++.+++|+.|.++.... .. ........... ...-+...+|+|++++.++..... -..|+
T Consensus 216 ~vn~v~PG~v~t~~~~~--------~~-~~~~~~~~~~~---------p~~r~~~p~dvA~~v~fL~s~~a~---~itG~ 274 (293)
T 3rih_A 216 TVNAILPGNILTEGLVD--------MG-EEYISGMARSI---------PMGMLGSPVDIGHLAAFLATDEAG---YITGQ 274 (293)
T ss_dssp EEEEEEECSBCCHHHHH--------TC-HHHHHHHHTTS---------TTSSCBCHHHHHHHHHHHHSGGGT---TCCSC
T ss_pred EEEEEecCCCcCcchhh--------cc-HHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHhCcccc---CCCCC
Confidence 99999999998763221 01 12222322222 122355789999999888765432 13588
Q ss_pred EEEeecC
Q psy7538 325 VCNLTSN 331 (543)
Q Consensus 325 vyni~s~ 331 (543)
++++.+|
T Consensus 275 ~i~vdGG 281 (293)
T 3rih_A 275 AIVVDGG 281 (293)
T ss_dssp EEEESTT
T ss_pred EEEECCC
Confidence 9999887
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.77 E-value=8.9e-18 Score=166.14 Aligned_cols=221 Identities=13% Similarity=0.124 Sum_probs=153.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+|+||||+|+||++++++|++.|. +|+++.|.... ..+.+.+. + .....++.++.+|+
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~---~V~~~~r~~~~--~~~~~~~~--------~-----~~~~~~~~~~~~D~ 88 (271)
T 4iin_A 27 FTGKNVLITGASKGIGAEIAKTLASMGL---KVWINYRSNAE--VADALKNE--------L-----EEKGYKAAVIKFDA 88 (271)
T ss_dssp CSCCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCHH--HHHHHHHH--------H-----HHTTCCEEEEECCT
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCCHH--HHHHHHHH--------H-----HhcCCceEEEECCC
Confidence 5789999999999999999999999987 78899986421 11222111 1 11235789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+..++|
T Consensus 89 ~~~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv 162 (271)
T 4iin_A 89 ASES------DFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVV 162 (271)
T ss_dssp TCHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEE
Confidence 9875 6666554 79999999997643 2456778999999999988887542 2557999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... ....|+.||+..+.+.+..+. .++.+
T Consensus 163 ~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v 204 (271)
T 4iin_A 163 NVASIIGERGNM--------------------------------------GQTNYSASKGGMIAMSKSFAYEGALRNIRF 204 (271)
T ss_dssp EECCHHHHHCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEE
T ss_pred EEechhhcCCCC--------------------------------------CchHhHHHHHHHHHHHHHHHHHHHHhCcEE
Confidence 999986542211 016899999999999877654 58999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
..++|+.|..+.....+. .. ............+.+++|+|++++.++..... ...|+++
T Consensus 205 ~~v~PG~v~T~~~~~~~~---------~~---------~~~~~~~~~~~~~~~p~dvA~~i~~l~s~~~~---~itG~~i 263 (271)
T 4iin_A 205 NSVTPGFIETDMNANLKD---------EL---------KADYVKNIPLNRLGSAKEVAEAVAFLLSDHSS---YITGETL 263 (271)
T ss_dssp EEEEECSBCCC------------------------------CGGGCTTCSCBCHHHHHHHHHHHHSGGGT---TCCSCEE
T ss_pred EEEEeCcccCCchhhhcH---------HH---------HHHHHhcCCcCCCcCHHHHHHHHHHHhCCCcC---CCcCCEE
Confidence 999999886653321110 00 00111222334678999999999988865432 1358899
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
++.+|
T Consensus 264 ~vdGG 268 (271)
T 4iin_A 264 KVNGG 268 (271)
T ss_dssp EESTT
T ss_pred EeCCC
Confidence 99876
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=1.1e-17 Score=163.31 Aligned_cols=218 Identities=13% Similarity=0.120 Sum_probs=148.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||+|+||++++++|++.|+ +|+++.|+.. +++++. ++ ....++.++.+|+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~-----~~~~~~--------~~-----~~~~~~~~~~~Dv 63 (249)
T 2ew8_A 5 LKDKLAVITGGANGIGRAIAERFAVEGA---DIAIADLVPA-----PEAEAA--------IR-----NLGRRVLTVKCDV 63 (249)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCC-----HHHHHH--------HH-----HTTCCEEEEECCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEcCCch-----hHHHHH--------HH-----hcCCcEEEEEeec
Confidence 5789999999999999999999999987 7899998752 222211 11 1124688999999
Q ss_pred CCCCCCCCHHHHHHHh-------cCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHH----HhccCCceE
Q psy7538 108 TQLKLGISEIDKKELI-------DNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELS----KQMKNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~l~~~ 169 (543)
++++ +++.++ .++|++||+||.... .+.++..+++|+.|+.++++++ ++. +..++
T Consensus 64 ~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~i 136 (249)
T 2ew8_A 64 SQPG------DVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN-GWGRI 136 (249)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCeEE
Confidence 9875 566554 379999999997532 2346678999999988888774 343 56899
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+..... ....|+.||+..|.+.+..+. .+++
T Consensus 137 v~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~ 178 (249)
T 2ew8_A 137 INLTSTTYWLKIE--------------------------------------AYTHYISTKAANIGFTRALASDLGKDGIT 178 (249)
T ss_dssp EEECCGGGGSCCS--------------------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred EEEcchhhccCCC--------------------------------------CchhHHHHHHHHHHHHHHHHHHHHhcCcE
Confidence 9999986653211 016899999999999887654 4899
Q ss_pred EEEEecCeeeecCCC-CCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCc
Q psy7538 246 CMILRPSIVVPIYKE-PLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKS 324 (543)
Q Consensus 246 ~~IlRps~V~G~~~~-p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~ 324 (543)
+.+++|+.|.++... ..+ .. . ........ .....+.+++|+|++++.++..... ...++
T Consensus 179 v~~v~Pg~v~t~~~~~~~~-------~~--~-~~~~~~~~-------~~~~~~~~p~dva~~~~~l~s~~~~---~~tG~ 238 (249)
T 2ew8_A 179 VNAIAPSLVRTATTEASAL-------SA--M-FDVLPNML-------QAIPRLQVPLDLTGAAAFLASDDAS---FITGQ 238 (249)
T ss_dssp EEEEEECCC----------------------------CTT-------SSSCSCCCTHHHHHHHHHHTSGGGT---TCCSC
T ss_pred EEEEecCcCcCccchhccc-------cc--h-hhHHHHhh-------CccCCCCCHHHHHHHHHHHcCcccC---CCCCc
Confidence 999999998776432 100 00 0 00000000 1123478899999999988865432 13578
Q ss_pred EEEeecC
Q psy7538 325 VCNLTSN 331 (543)
Q Consensus 325 vyni~s~ 331 (543)
++++.++
T Consensus 239 ~~~vdGG 245 (249)
T 2ew8_A 239 TLAVDGG 245 (249)
T ss_dssp EEEESSS
T ss_pred EEEECCC
Confidence 9998876
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.4e-18 Score=171.53 Aligned_cols=235 Identities=14% Similarity=0.095 Sum_probs=154.7
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||||+||++++++|++.|+ +|+++.|+.. ++++. .+.+... ....++.++.+|+
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~------~~~~~-----~~~l~~~---~~~~~~~~~~~D~ 67 (267)
T 2gdz_A 5 VNGKVALVTGAAQGIGRAFAEALLLKGA---KVALVDWNLE------AGVQC-----KAALHEQ---FEPQKTLFIQCDV 67 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHH------HHHHH-----HHHHTTT---SCGGGEEEEECCT
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCC---EEEEEECCHH------HHHHH-----HHHHHhh---cCCCceEEEecCC
Confidence 5689999999999999999999999987 7889998642 22111 1111110 0124688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHH----HHhcc--CCceEEEEec
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLEL----SKQMK--NLKCFTYIST 174 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~----a~~~~--~l~~~V~vST 174 (543)
++++ +++.+++ .+|+|||+||... .+.++..+++|+.|+..+.+. +++.+ +..++|++||
T Consensus 68 ~~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS 140 (267)
T 2gdz_A 68 ADQQ------QLRDTFRKVVDHFGRLDILVNNAGVNN-EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSS 140 (267)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCCEEEECCCCCC-SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECC
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCC-hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCC
Confidence 9875 6666654 4799999999764 456788999999976655544 43331 1579999999
Q ss_pred CccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHh------hcCCcEEE
Q psy7538 175 AYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECM------ELGMPCMI 248 (543)
Q Consensus 175 ~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~------~~~lp~~I 248 (543)
..+..... + ...|+.||+..|.+.+..+ ..++++.+
T Consensus 141 ~~~~~~~~---------~-----------------------------~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~ 182 (267)
T 2gdz_A 141 LAGLMPVA---------Q-----------------------------QPVYCASKHGIVGFTRSAALAANLMNSGVRLNA 182 (267)
T ss_dssp GGGTSCCT---------T-----------------------------CHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred ccccCCCC---------C-----------------------------CchHHHHHHHHHHHHHHHHHHHHhccCCcEEEE
Confidence 87654211 0 1589999999999887631 15899999
Q ss_pred EecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEe
Q psy7538 249 LRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNL 328 (543)
Q Consensus 249 lRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni 328 (543)
++|+.|.++..... .... ...... ..... ...+.....+++++|+|++++.++..... .++++++
T Consensus 183 v~Pg~v~t~~~~~~-------~~~~-~~~~~~-~~~~~-~~~~~~~~~~~~~~dvA~~v~~l~s~~~~-----~G~~~~v 247 (267)
T 2gdz_A 183 ICPGFVNTAILESI-------EKEE-NMGQYI-EYKDH-IKDMIKYYGILDPPLIANGLITLIEDDAL-----NGAIMKI 247 (267)
T ss_dssp EEESCBSSHHHHGG-------GCHH-HHGGGG-GGHHH-HHHHHHHHCCBCHHHHHHHHHHHHHCTTC-----SSCEEEE
T ss_pred EecCcCcchhhhcc-------cccc-ccchhh-hHHHH-HHHHhccccCCCHHHHHHHHHHHhcCcCC-----CCcEEEe
Confidence 99998866532110 0000 000000 00000 00001123478999999999988876543 5889999
Q ss_pred ecCCCCcccHHHH
Q psy7538 329 TSNKDYKITWQEI 341 (543)
Q Consensus 329 ~s~~~~~~t~~e~ 341 (543)
+++ .++++.|+
T Consensus 248 ~gg--~~~~~~~~ 258 (267)
T 2gdz_A 248 TTS--KGIHFQDY 258 (267)
T ss_dssp ETT--TEEEECCC
T ss_pred cCC--CcccccCc
Confidence 988 77777664
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.7e-17 Score=165.01 Aligned_cols=223 Identities=14% Similarity=0.099 Sum_probs=145.6
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
-+++|+++||||+|+||++++++|++.|. +|+++.|... ++++++. +.+. ....++.++.+|
T Consensus 26 ~~~~k~~lVTGas~GIG~aia~~la~~G~---~V~~~~~~~~-----~~~~~~~-----~~~~-----~~~~~~~~~~~D 87 (280)
T 4da9_A 26 QKARPVAIVTGGRRGIGLGIARALAASGF---DIAITGIGDA-----EGVAPVI-----AELS-----GLGARVIFLRAD 87 (280)
T ss_dssp CCCCCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCCH-----HHHHHHH-----HHHH-----HTTCCEEEEECC
T ss_pred ccCCCEEEEecCCCHHHHHHHHHHHHCCC---eEEEEeCCCH-----HHHHHHH-----HHHH-----hcCCcEEEEEec
Confidence 35789999999999999999999999987 7888886431 2222211 1111 123578999999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CccEEEEcCccCC---------CcccHHHHHHHHHHHHHHHHHHHHhc---cC--
Q psy7538 107 ITQLKLGISEIDKKELID-------NVDIVYHVAATIR---------FDEPIKTAVILNTRGTRDMLELSKQM---KN-- 165 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~---------~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~-- 165 (543)
+++++ +++.+++ ++|++||+||... ..+.++..+++|+.|+.++++++... .+
T Consensus 88 v~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~ 161 (280)
T 4da9_A 88 LADLS------SHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDAR 161 (280)
T ss_dssp TTSGG------GHHHHHHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCC
Confidence 99986 5666554 7999999999731 12456678899999999998887653 11
Q ss_pred -CceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh---
Q psy7538 166 -LKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME--- 241 (543)
Q Consensus 166 -l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~--- 241 (543)
-.++|++||..+..... ....|+.||+..+.+.+..+.
T Consensus 162 ~~g~Iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~ 203 (280)
T 4da9_A 162 ASRSIINITSVSAVMTSP--------------------------------------ERLDYCMSKAGLAAFSQGLALRLA 203 (280)
T ss_dssp CCEEEEEECCC---------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEcchhhccCCC--------------------------------------CccHHHHHHHHHHHHHHHHHHHHH
Confidence 45899999986542211 015899999999998887654
Q ss_pred -cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCC
Q psy7538 242 -LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKES 320 (543)
Q Consensus 242 -~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~ 320 (543)
+++++..++|+.|..+......+ ........ .......+..++|+|++++.++..... -
T Consensus 204 ~~gI~vn~v~PG~v~T~~~~~~~~---------~~~~~~~~--------~~~p~~r~~~pedvA~~v~~L~s~~~~---~ 263 (280)
T 4da9_A 204 ETGIAVFEVRPGIIRSDMTAAVSG---------KYDGLIES--------GLVPMRRWGEPEDIGNIVAGLAGGQFG---F 263 (280)
T ss_dssp TTTEEEEEEEECCBCC---------------------------------------CCBCHHHHHHHHHHHHTSTTG---G
T ss_pred HhCcEEEEEeecCCcCCchhhcch---------hHHHHHhh--------cCCCcCCcCCHHHHHHHHHHHhCcccc---C
Confidence 58999999999987664322110 00000000 011224567899999999888765432 1
Q ss_pred CCCcEEEeecC
Q psy7538 321 ERKSVCNLTSN 331 (543)
Q Consensus 321 ~~~~vyni~s~ 331 (543)
..|+++++.+|
T Consensus 264 itG~~i~vdGG 274 (280)
T 4da9_A 264 ATGSVIQADGG 274 (280)
T ss_dssp GTTCEEEESTT
T ss_pred CCCCEEEECCC
Confidence 25889999877
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=2.6e-18 Score=169.56 Aligned_cols=237 Identities=11% Similarity=0.049 Sum_probs=161.1
Q ss_pred chhhhhcCCCEEEEEcCc--chhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCc
Q psy7538 22 DRIAKTYENKSIFLSGGS--GFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQK 99 (543)
Q Consensus 22 ~~i~~~~~~~~VlITGat--GFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~ 99 (543)
.+....+++|+|+||||+ |+||++++++|++.|. +|+++.|+.+. .++++++. .+ ..+
T Consensus 6 ~~~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~~~~---------~~-----~~~ 65 (271)
T 3ek2_A 6 HHHMGFLDGKRILLTGLLSNRSIAYGIAKACKREGA---ELAFTYVGDRF---KDRITEFA---------AE-----FGS 65 (271)
T ss_dssp ---CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTC---EEEEEESSGGG---HHHHHHHH---------HH-----TTC
T ss_pred CCCccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC---CEEEEecchhh---HHHHHHHH---------HH-----cCC
Confidence 334567899999999999 9999999999999986 88899987432 33343321 11 134
Q ss_pred eEEEEccCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC------------cccHHHHHHHHHHHHHHHHHHH
Q psy7538 100 IQVISGDITQLKLGISEIDKKELID-------NVDIVYHVAATIRF------------DEPIKTAVILNTRGTRDMLELS 160 (543)
Q Consensus 100 v~~i~gDl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~------------~~~~~~~~~~Nv~gt~~ll~~a 160 (543)
+.++.+|+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++
T Consensus 66 ~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 139 (271)
T 3ek2_A 66 ELVFPCDVADDA------QIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAA 139 (271)
T ss_dssp CCEEECCTTCHH------HHHHHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHH
T ss_pred cEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHH
Confidence 778999999875 6666665 67999999997532 2345678999999999999998
Q ss_pred Hhc-cCCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHH
Q psy7538 161 KQM-KNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAEC 239 (543)
Q Consensus 161 ~~~-~~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~ 239 (543)
... ..-.++|++||..+..... ....|+.||+..+.+.+..
T Consensus 140 ~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~~~~~l 181 (271)
T 3ek2_A 140 LPMLSDDASLLTLSYLGAERAIP--------------------------------------NYNTMGLAKAALEASVRYL 181 (271)
T ss_dssp GGGEEEEEEEEEEECGGGTSBCT--------------------------------------TTTHHHHHHHHHHHHHHHH
T ss_pred HHHhccCceEEEEeccccccCCC--------------------------------------CccchhHHHHHHHHHHHHH
Confidence 764 2234899999986543211 0168999999999998876
Q ss_pred hh----cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhc
Q psy7538 240 ME----LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFL 315 (543)
Q Consensus 240 ~~----~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~ 315 (543)
+. .++.+.+++|+.|..+..... ............. .....+..++|+|++++.++....
T Consensus 182 a~e~~~~gi~v~~v~PG~v~T~~~~~~-------~~~~~~~~~~~~~---------~~~~~~~~pedva~~i~~l~s~~~ 245 (271)
T 3ek2_A 182 AVSLGAKGVRVNAISAGPIKTLAASGI-------KSFGKILDFVESN---------SPLKRNVTIEQVGNAGAFLLSDLA 245 (271)
T ss_dssp HHHHHTTTCEEEEEEECCC-----CCC-------HHHHHHHHHHHHH---------STTSSCCCHHHHHHHHHHHHSGGG
T ss_pred HHHHHhcCcEEEEEecCcccchhhhcc-------cchHHHHHHHHhc---------CCcCCCCCHHHHHHHHHHHcCccc
Confidence 64 589999999999877543211 1111222222211 122346789999999998886543
Q ss_pred ccCCCCCCcEEEeecCCCCcccHHHHHH
Q psy7538 316 NSKESERKSVCNLTSNKDYKITWQEICD 343 (543)
Q Consensus 316 ~~~~~~~~~vyni~s~~~~~~t~~e~~~ 343 (543)
. ...|+++++.++ ..++..++.+
T Consensus 246 ~---~~tG~~i~vdgG--~~~~~~~~~~ 268 (271)
T 3ek2_A 246 S---GVTAEVMHVDSG--FNAVVGGMAG 268 (271)
T ss_dssp T---TCCSEEEEESTT--GGGBCCCC--
T ss_pred C---CeeeeEEEECCC--eeeehhhhhh
Confidence 2 135889999988 6666665543
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=2.8e-17 Score=161.94 Aligned_cols=223 Identities=8% Similarity=0.040 Sum_probs=157.2
Q ss_pred cCCCEEEEEcCcch--hHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 28 YENKSIFLSGGSGF--LGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 28 ~~~~~VlITGatGF--iG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
++||+++||||+|+ ||++++++|++.|. +|+++.|+.+. .+.++++.+ .....++.++.+
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~~~~~------------~~~~~~~~~~~~ 66 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEAGA---RLIFTYAGERL---EKSVHELAG------------TLDRNDSIILPC 66 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHTTC---EEEEEESSGGG---HHHHHHHHH------------TSSSCCCEEEEC
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHCCC---EEEEecCchHH---HHHHHHHHH------------hcCCCCceEEeC
Confidence 57899999999999 99999999999987 78888887432 233333221 111237899999
Q ss_pred cCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCC-------C----cccHHHHHHHHHHHHHHHHHHHHhc-cCC
Q psy7538 106 DITQLKLGISEIDKKELID-------NVDIVYHVAATIR-------F----DEPIKTAVILNTRGTRDMLELSKQM-KNL 166 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~-------~----~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l 166 (543)
|+++++ +++.+++ .+|++||+||... + .+.+...+++|+.|+.++++++... .+-
T Consensus 67 D~~~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 140 (266)
T 3oig_A 67 DVTNDA------EIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEG 140 (266)
T ss_dssp CCSSSH------HHHHHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTC
T ss_pred CCCCHH------HHHHHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCC
Confidence 999986 6666554 6899999999754 1 1345668999999999999999764 223
Q ss_pred ceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----c
Q psy7538 167 KCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----L 242 (543)
Q Consensus 167 ~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~ 242 (543)
.++|++||..+..... . ...|+.||+..+.+.+..+. .
T Consensus 141 g~iv~isS~~~~~~~~----------~----------------------------~~~Y~asKaa~~~~~~~la~e~~~~ 182 (266)
T 3oig_A 141 GSIVTLTYLGGELVMP----------N----------------------------YNVMGVAKASLDASVKYLAADLGKE 182 (266)
T ss_dssp EEEEEEECGGGTSCCT----------T----------------------------THHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred ceEEEEecccccccCC----------C----------------------------cchhHHHHHHHHHHHHHHHHHHhhc
Confidence 5899999986643211 0 16899999999998877654 5
Q ss_pred CCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCC
Q psy7538 243 GMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322 (543)
Q Consensus 243 ~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~ 322 (543)
|+.+..++|+.|..+..... .............. ....+...+|+|++++.++..... ...
T Consensus 183 gi~v~~v~PG~v~T~~~~~~-------~~~~~~~~~~~~~~---------~~~~~~~p~dva~~v~~l~s~~~~---~~t 243 (266)
T 3oig_A 183 NIRVNSISAGPIRTLSAKGI-------SDFNSILKDIEERA---------PLRRTTTPEEVGDTAAFLFSDMSR---GIT 243 (266)
T ss_dssp TEEEEEEEECCCCSGGGTTC-------TTHHHHHHHHHHHS---------TTSSCCCHHHHHHHHHHHHSGGGT---TCC
T ss_pred CcEEEEEecCcccccccccc-------cchHHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHcCCchh---cCc
Confidence 89999999999877543321 11122222222211 123467899999999988876432 135
Q ss_pred CcEEEeecC
Q psy7538 323 KSVCNLTSN 331 (543)
Q Consensus 323 ~~vyni~s~ 331 (543)
|+++++.+|
T Consensus 244 G~~i~vdGG 252 (266)
T 3oig_A 244 GENLHVDSG 252 (266)
T ss_dssp SCEEEESTT
T ss_pred CCEEEECCC
Confidence 889999887
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.1e-17 Score=164.00 Aligned_cols=225 Identities=13% Similarity=0.081 Sum_probs=153.2
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
-++||+++||||+|+||++++++|++.|. +|+++.|+. +++++..+ ....++.++.+|
T Consensus 26 ~l~gk~vlVTGas~gIG~aia~~la~~G~---~V~~~~r~~------~~~~~~~~-------------~~~~~~~~~~~D 83 (277)
T 3gvc_A 26 DLAGKVAIVTGAGAGIGLAVARRLADEGC---HVLCADIDG------DAADAAAT-------------KIGCGAAACRVD 83 (277)
T ss_dssp -CTTCEEEETTTTSTHHHHHHHHHHHTTC---EEEEEESSH------HHHHHHHH-------------HHCSSCEEEECC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHHH-------------HcCCcceEEEec
Confidence 36899999999999999999999999987 888998864 22322211 112467899999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceE
Q psy7538 107 ITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCF 169 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~ 169 (543)
+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .+-.++
T Consensus 84 v~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~I 157 (277)
T 3gvc_A 84 VSDEQ------QIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAI 157 (277)
T ss_dssp TTCHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEE
Confidence 99875 5665554 68999999997542 2446678999999999999887542 245689
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+...... ...|+.||+..+.+.+..+. +|++
T Consensus 158 v~isS~~~~~~~~~--------------------------------------~~~Y~asKaa~~~l~~~la~e~~~~gI~ 199 (277)
T 3gvc_A 158 VNLSSLAGQVAVGG--------------------------------------TGAYGMSKAGIIQLSRITAAELRSSGIR 199 (277)
T ss_dssp EEECCGGGTSCCTT--------------------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred EEEcchhhccCCCC--------------------------------------chhHHHHHHHHHHHHHHHHHHhcccCeE
Confidence 99999866432110 16899999999998876554 5899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
+.+++|+.|.++..+......+ .. .......... ......+..++|+|++++.++..... -..|++
T Consensus 200 vn~v~PG~v~t~~~~~~~~~~~-----~~----~~~~~~~~~~--~~~~~r~~~pedvA~~v~~L~s~~a~---~itG~~ 265 (277)
T 3gvc_A 200 SNTLLPAFVDTPMQQTAMAMFD-----GA----LGAGGARSMI--ARLQGRMAAPEEMAGIVVFLLSDDAS---MITGTT 265 (277)
T ss_dssp EEEEEECSBCCHHHHHHHTCC---------------CCHHHHH--HHHHSSCBCHHHHHHHHHHHHSGGGT---TCCSCE
T ss_pred EEEEeeCCccCchHHHhhhcch-----hh----HHHHhhhhhh--hccccCCCCHHHHHHHHHHHcCCccC---CccCcE
Confidence 9999999987763211000000 00 0000000000 01123567899999999988865432 135889
Q ss_pred EEeecC
Q psy7538 326 CNLTSN 331 (543)
Q Consensus 326 yni~s~ 331 (543)
+++.+|
T Consensus 266 i~vdGG 271 (277)
T 3gvc_A 266 QIADGG 271 (277)
T ss_dssp EEESTT
T ss_pred EEECCc
Confidence 999887
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.77 E-value=5.8e-18 Score=167.10 Aligned_cols=217 Identities=11% Similarity=0.111 Sum_probs=149.6
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+|+||||+|+||++++++|++.|. +|.+..|+. ++++++.+ ....++.++.+|+
T Consensus 25 l~gk~vlVTGas~gIG~aia~~la~~G~---~V~~~~r~~------~~~~~~~~-------------~~~~~~~~~~~Dv 82 (266)
T 3grp_A 25 LTGRKALVTGATGGIGEAIARCFHAQGA---IVGLHGTRE------DKLKEIAA-------------DLGKDVFVFSANL 82 (266)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHHH-------------HHCSSEEEEECCT
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHHH-------------HhCCceEEEEeec
Confidence 6789999999999999999999999996 788888863 33333211 1124788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++.+++... .+..++|
T Consensus 83 ~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv 156 (266)
T 3grp_A 83 SDRK------SIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRII 156 (266)
T ss_dssp TSHH------HHHHHHHHHHHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEE
Confidence 9875 6666654 79999999997542 2456778999999977776665331 2567999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... ....|+.||+..+.+.+..+. +|+++
T Consensus 157 ~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gI~v 198 (266)
T 3grp_A 157 NITSIVGVVGNP--------------------------------------GQTNYCAAKAGLIGFSKALAQEIASRNITV 198 (266)
T ss_dssp EECCC---------------------------------------------CHHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred EECCHHHcCCCC--------------------------------------CchhHHHHHHHHHHHHHHHHHHhhhhCcEE
Confidence 999986542211 006899999988888776554 58999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
.+++|+.|.++..... . .........+ .....+..++|+|++++.++..... -..|+++
T Consensus 199 n~v~PG~v~t~~~~~~--------~-~~~~~~~~~~---------~p~~r~~~~edvA~~v~~L~s~~~~---~itG~~i 257 (266)
T 3grp_A 199 NCIAPGFIKSAMTDKL--------N-EKQKEAIMAM---------IPMKRMGIGEEIAFATVYLASDEAA---YLTGQTL 257 (266)
T ss_dssp EEEEECSBCSHHHHTC--------C-HHHHHHHHTT---------CTTCSCBCHHHHHHHHHHHHSGGGT---TCCSCEE
T ss_pred EEEeeCcCCCchhhcc--------C-HHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCcccc---CccCCEE
Confidence 9999998876532211 1 1122222222 2234567889999999888765432 1358899
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
++.+|
T Consensus 258 ~vdGG 262 (266)
T 3grp_A 258 HINGG 262 (266)
T ss_dssp EESTT
T ss_pred EECCC
Confidence 99876
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.77 E-value=6.5e-18 Score=166.03 Aligned_cols=232 Identities=15% Similarity=0.147 Sum_probs=151.7
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||+|+||++++++|++.|+ +|+++.|+. ++++++. +.+.... ...++.++.+|+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~------~~~~~~~-----~~~~~~~---~~~~~~~~~~D~ 67 (260)
T 2z1n_A 5 IQGKLAVVTAGSSGLGFASALELARNGA---RLLLFSRNR------EKLEAAA-----SRIASLV---SGAQVDIVAGDI 67 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH-----HHHHHHS---TTCCEEEEECCT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHH-----HHHHhcC---CCCeEEEEEccC
Confidence 5789999999999999999999999986 788999864 2222211 1111110 012688999999
Q ss_pred CCCCCCCCHHHHHHHhc------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHH----hccCCceEE
Q psy7538 108 TQLKLGISEIDKKELID------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSK----QMKNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~----~~~~l~~~V 170 (543)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++.+.+. +. +..++|
T Consensus 68 ~~~~------~v~~~~~~~~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv 140 (260)
T 2z1n_A 68 REPG------DIDRLFEKARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEK-GWGRMV 140 (260)
T ss_dssp TCHH------HHHHHHHHHHHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHH-TCEEEE
T ss_pred CCHH------HHHHHHHHHHHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEE
Confidence 9875 6776665 59999999996532 23466789999999977766654 33 568999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+...... ...|+.||+..+.+.+..+. .|+++
T Consensus 141 ~isS~~~~~~~~~--------------------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v 182 (260)
T 2z1n_A 141 YIGSVTLLRPWQD--------------------------------------LALSNIMRLPVIGVVRTLALELAPHGVTV 182 (260)
T ss_dssp EECCGGGTSCCTT--------------------------------------BHHHHHHTHHHHHHHHHHHHHHGGGTEEE
T ss_pred EECchhhcCCCCC--------------------------------------CchhHHHHHHHHHHHHHHHHHHhhhCeEE
Confidence 9999866532110 16899999999998877654 48999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
.++||+.|.++...... .........-.... ... .........+.+++|+|++++.++..... ...++++
T Consensus 183 ~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~~~~---~~~-~~~~~p~~r~~~~~dva~~v~~l~s~~~~---~~tG~~i 252 (260)
T 2z1n_A 183 NAVLPSLILTDRVRSLA---EERARRSGITVEEA---LKS-MASRIPMGRVGKPEELASVVAFLASEKAS---FITGAVI 252 (260)
T ss_dssp EEEEECHHHHCCCC------------------------------CCTTSSCCCHHHHHHHHHHHTSGGGT---TCCSCEE
T ss_pred EEEEECCcccchhhhhh---hhhhcccCCcHHHH---HHH-HHhcCCCCCccCHHHHHHHHHHHhCcccc---CCCCCEE
Confidence 99999999887532100 00000000000000 000 01111223477899999999988865432 1357899
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
++.++
T Consensus 253 ~vdGG 257 (260)
T 2z1n_A 253 PVDGG 257 (260)
T ss_dssp EESTT
T ss_pred EeCCC
Confidence 98776
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=1.7e-17 Score=165.01 Aligned_cols=221 Identities=13% Similarity=0.077 Sum_probs=157.1
Q ss_pred hcCCCEEEEEcCcch--hHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEE
Q psy7538 27 TYENKSIFLSGGSGF--LGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVIS 104 (543)
Q Consensus 27 ~~~~~~VlITGatGF--iG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~ 104 (543)
-+++|+|+||||+|+ ||++++++|++.|. +|+++.|.. ..+.++++. . ...++.++.
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~---~V~~~~r~~----~~~~~~~l~---------~-----~~~~~~~~~ 81 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHREGA---ELAFTYVGQ----FKDRVEKLC---------A-----EFNPAAVLP 81 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHHTTC---EEEEEECTT----CHHHHHHHH---------G-----GGCCSEEEE
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHcCC---EEEEeeCch----HHHHHHHHH---------H-----hcCCceEEE
Confidence 367899999999988 99999999999986 789999976 234444331 1 123578999
Q ss_pred ccCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC------------cccHHHHHHHHHHHHHHHHHHHHhc--
Q psy7538 105 GDITQLKLGISEIDKKELID-------NVDIVYHVAATIRF------------DEPIKTAVILNTRGTRDMLELSKQM-- 163 (543)
Q Consensus 105 gDl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~------------~~~~~~~~~~Nv~gt~~ll~~a~~~-- 163 (543)
+|+++++ +++.+++ .+|+|||+||.... .+.+...+++|+.|+.++++++...
T Consensus 82 ~Dl~~~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~ 155 (280)
T 3nrc_A 82 CDVISDQ------EIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMK 155 (280)
T ss_dssp CCTTCHH------HHHHHHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred eecCCHH------HHHHHHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999875 6666554 57999999997642 2345668999999999999998763
Q ss_pred cCCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh--
Q psy7538 164 KNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-- 241 (543)
Q Consensus 164 ~~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-- 241 (543)
++-.++|++||..+..... ....|+.||+..+.+.+..+.
T Consensus 156 ~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaal~~~~~~la~e~ 197 (280)
T 3nrc_A 156 NRNASMVALTYIGAEKAMP--------------------------------------SYNTMGVAKASLEATVRYTALAL 197 (280)
T ss_dssp TTTCEEEEEECGGGTSCCT--------------------------------------TTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCeEEEEeccccccCCC--------------------------------------CchhhHHHHHHHHHHHHHHHHHH
Confidence 1346999999986643211 016899999999999876554
Q ss_pred --cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCC
Q psy7538 242 --LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKE 319 (543)
Q Consensus 242 --~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~ 319 (543)
.++.+.+++|+.|..+..... ............. .....+..++|+|++++.++.....
T Consensus 198 ~~~gi~v~~v~PG~v~T~~~~~~-------~~~~~~~~~~~~~---------~p~~~~~~pedvA~~v~~l~s~~~~--- 258 (280)
T 3nrc_A 198 GEDGIKVNAVSAGPIKTLAASGI-------SNFKKMLDYNAMV---------SPLKKNVDIMEVGNTVAFLCSDMAT--- 258 (280)
T ss_dssp GGGTCEEEEEEECCCCCSGGGGC-------TTHHHHHHHHHHH---------STTCSCCCHHHHHHHHHHTTSGGGT---
T ss_pred HHcCcEEEEEeeccccchhhhcC-------cchHHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHhCcccC---
Confidence 589999999999977643321 1112222222211 1123467789999999988765432
Q ss_pred CCCCcEEEeecC
Q psy7538 320 SERKSVCNLTSN 331 (543)
Q Consensus 320 ~~~~~vyni~s~ 331 (543)
-..|+++++.++
T Consensus 259 ~~tG~~i~vdgG 270 (280)
T 3nrc_A 259 GITGEVVHVDAG 270 (280)
T ss_dssp TCCSCEEEESTT
T ss_pred CcCCcEEEECCC
Confidence 135889999887
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=3.2e-17 Score=164.62 Aligned_cols=228 Identities=11% Similarity=0.132 Sum_probs=154.4
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
.+++|+|+||||+|+||++++++|++.|+ +|+++.|+. +++++. .+.+.....+....++.++.+|
T Consensus 15 ~l~~k~vlVTGasggIG~~la~~l~~~G~---~V~~~~r~~------~~~~~~-----~~~l~~~~~~~~~~~~~~~~~D 80 (303)
T 1yxm_A 15 LLQGQVAIVTGGATGIGKAIVKELLELGS---NVVIASRKL------ERLKSA-----ADELQANLPPTKQARVIPIQCN 80 (303)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHH-----HHHHHHTSCTTCCCCEEEEECC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHH-----HHHHHhhccccCCccEEEEecC
Confidence 46789999999999999999999999986 788999864 222221 1122221101123578999999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceE
Q psy7538 107 ITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCF 169 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~ 169 (543)
+++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... .+..++
T Consensus 81 ~~~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~i 154 (303)
T 1yxm_A 81 IRNEE------EVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSI 154 (303)
T ss_dssp TTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEE
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeE
Confidence 99875 6666654 59999999995432 2345678999999999999998662 134789
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||.. ... .|. ...|+.+|+..+.+.+..+. .|++
T Consensus 155 v~isS~~-~~~----------~~~----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~ 195 (303)
T 1yxm_A 155 VNIIVPT-KAG----------FPL----------------------------AVHSGAARAGVYNLTKSLALEWACSGIR 195 (303)
T ss_dssp EEECCCC-TTC----------CTT----------------------------CHHHHHHHHHHHHHHHHHHHHTGGGTEE
T ss_pred EEEEeec-ccC----------CCc----------------------------chhhHHHHHHHHHHHHHHHHHhcccCeE
Confidence 9999985 211 010 15899999999988877654 4899
Q ss_pred EEEEecCeeeecCC-CCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCc
Q psy7538 246 CMILRPSIVVPIYK-EPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKS 324 (543)
Q Consensus 246 ~~IlRps~V~G~~~-~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~ 324 (543)
++++||+.|+++.. .....+.+ ........ ......+++++|+|++++.++..... ...|+
T Consensus 196 v~~v~Pg~v~t~~~~~~~~~~~~------~~~~~~~~---------~~p~~~~~~~~dvA~~i~~l~~~~~~---~~~G~ 257 (303)
T 1yxm_A 196 INCVAPGVIYSQTAVENYGSWGQ------SFFEGSFQ---------KIPAKRIGVPEEVSSVVCFLLSPAAS---FITGQ 257 (303)
T ss_dssp EEEEEECSBCCTGGGTTSGGGGG------GGGTTGGG---------GSTTSSCBCTHHHHHHHHHHHSGGGT---TCCSC
T ss_pred EEEEecCCcccchhhhhccccch------HHHHHHHh---------cCcccCCCCHHHHHHHHHHHhCcccc---cCCCc
Confidence 99999999998731 11110000 00000000 01123478899999999988865432 13578
Q ss_pred EEEeecC
Q psy7538 325 VCNLTSN 331 (543)
Q Consensus 325 vyni~s~ 331 (543)
++++.++
T Consensus 258 ~~~v~gG 264 (303)
T 1yxm_A 258 SVDVDGG 264 (303)
T ss_dssp EEEESTT
T ss_pred EEEECCC
Confidence 9999887
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.77 E-value=8.3e-18 Score=167.53 Aligned_cols=245 Identities=12% Similarity=0.108 Sum_probs=160.0
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCC------HHHHHHHHhcCchhHHHHhhcCcCCCCceE
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKT------PNQRVEELFESPVFDALKTLRGKSILQKIQ 101 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~------~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~ 101 (543)
++||+|+||||+|+||++++++|++.|. +|+++.|...... ..+++++.. ..+ .....++.
T Consensus 8 l~gk~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-----~~~~~~~~ 74 (287)
T 3pxx_A 8 VQDKVVLVTGGARGQGRSHAVKLAEEGA---DIILFDICHDIETNEYPLATSRDLEEAG-----LEV-----EKTGRKAY 74 (287)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSCCTTSCSCCCCHHHHHHHH-----HHH-----HHTTSCEE
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC---eEEEEcccccccccccchhhhHHHHHHH-----HHH-----HhcCCceE
Confidence 6789999999999999999999999997 7888888743211 123332221 111 11235789
Q ss_pred EEEccCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-----cccHHHHHHHHHHHHHHHHHHHHhc-cCCce
Q psy7538 102 VISGDITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-----DEPIKTAVILNTRGTRDMLELSKQM-KNLKC 168 (543)
Q Consensus 102 ~i~gDl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-----~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~ 168 (543)
++.+|+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .+-.+
T Consensus 75 ~~~~D~~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~ 148 (287)
T 3pxx_A 75 TAEVDVRDRA------AVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGAS 148 (287)
T ss_dssp EEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCE
T ss_pred EEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcE
Confidence 9999999875 6666654 79999999997643 3556788999999999999999764 23458
Q ss_pred EEEEecCccccCC--CcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----c
Q psy7538 169 FTYISTAYCHPSE--KVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----L 242 (543)
Q Consensus 169 ~V~vST~y~~~~~--~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~ 242 (543)
+|++||..+.... .+..|.. +. .+. ..|+.||+..+.+.+..+. +
T Consensus 149 iv~isS~~~~~~~~~~~~~~~~---~~--------------------~~~------~~Y~asK~a~~~~~~~la~e~~~~ 199 (287)
T 3pxx_A 149 IITTGSVAGLIAAAQPPGAGGP---QG--------------------PGG------AGYSYAKQLVDSYTLQLAAQLAPQ 199 (287)
T ss_dssp EEEECCHHHHHHHHCCC--------CH--------------------HHH------HHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred EEEeccchhccccccccccccc---CC--------------------Ccc------chHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999998554221 1111100 00 000 5899999999999887665 4
Q ss_pred CCcEEEEecCeeeecCCCCCCC---CCCCCCch--HHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhccc
Q psy7538 243 GMPCMILRPSIVVPIYKEPLPG---WTDNINGP--TGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNS 317 (543)
Q Consensus 243 ~lp~~IlRps~V~G~~~~p~~g---w~d~~~g~--~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~ 317 (543)
|+.+..++|+.|..+.....+. +......+ ....... .........+.+++|+|++++.++.....
T Consensus 200 gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~p~dva~~v~fL~s~~a~- 270 (287)
T 3pxx_A 200 SIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAF--------PAMQAMPTPYVEASDISNAVCFLASDESR- 270 (287)
T ss_dssp TCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHG--------GGGCSSSCSCBCHHHHHHHHHHHHSGGGT-
T ss_pred CcEEEEEecCccccccccccchhhhhccccccchhHHHHhhh--------hhhcccCCCCCCHHHHHhhHheecchhhc-
Confidence 8999999999997765432100 00000000 0000000 01111225788999999999988765432
Q ss_pred CCCCCCcEEEeecC
Q psy7538 318 KESERKSVCNLTSN 331 (543)
Q Consensus 318 ~~~~~~~vyni~s~ 331 (543)
-..|+++++.+|
T Consensus 271 --~itG~~i~vdGG 282 (287)
T 3pxx_A 271 --YVTGLQFKVDAG 282 (287)
T ss_dssp --TCCSCEEEESTT
T ss_pred --CCCCceEeECch
Confidence 135889999887
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.1e-17 Score=169.81 Aligned_cols=173 Identities=17% Similarity=0.277 Sum_probs=126.5
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||||+||++++++|++.|+ +|++..|+..+.. .++++++.+ .++ ....++.++.+|+
T Consensus 3 m~~k~vlVTGas~GIG~aia~~L~~~G~---~V~~~~r~~~~r~-~~~~~~l~~-----~~~-----~~~~~~~~~~~Dv 68 (324)
T 3u9l_A 3 MSKKIILITGASSGFGRLTAEALAGAGH---RVYASMRDIVGRN-ASNVEAIAG-----FAR-----DNDVDLRTLELDV 68 (324)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEESCTTTTT-HHHHHHHHH-----HHH-----HHTCCEEEEECCT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEecCcccccC-HHHHHHHHH-----HHH-----hcCCcEEEEEeec
Confidence 3578999999999999999999999997 8999999754433 233333211 111 1125789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHH----HhccCCceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELS----KQMKNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~l~~~ 169 (543)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++ ++. +..++
T Consensus 69 td~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~-~~g~i 141 (324)
T 3u9l_A 69 QSQV------SVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQ-KHGLL 141 (324)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEE
Confidence 9875 6766665 79999999996532 2445678999999999999998 443 56899
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+..... | ....|+.||+..|.+.+..+. .|++
T Consensus 142 V~isS~~~~~~~~---------~----------------------------~~~~Y~asKaa~~~~~~~la~el~~~gI~ 184 (324)
T 3u9l_A 142 IWISSSSSAGGTP---------P----------------------------YLAPYFAAKAAMDAIAVQYARELSRWGIE 184 (324)
T ss_dssp EEECCGGGTSCCC---------S----------------------------SCHHHHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred EEEecchhccCCC---------C----------------------------cchhHHHHHHHHHHHHHHHHHHhhhhCcE
Confidence 9999986642210 0 015799999999999887654 5899
Q ss_pred EEEEecCeeeecC
Q psy7538 246 CMILRPSIVVPIY 258 (543)
Q Consensus 246 ~~IlRps~V~G~~ 258 (543)
+++++||.|.++.
T Consensus 185 v~~v~PG~v~t~~ 197 (324)
T 3u9l_A 185 TSIIVPGAFTSGT 197 (324)
T ss_dssp EEEEEECCC----
T ss_pred EEEEECCccccCc
Confidence 9999999997543
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=2.1e-17 Score=163.30 Aligned_cols=219 Identities=12% Similarity=0.114 Sum_probs=153.4
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+|+||||+|+||++++++|++.|. +|.++.|... ++++++. +.++ ....++.++.+|+
T Consensus 26 l~~k~vlVTGas~gIG~aia~~la~~G~---~V~~~~~~~~-----~~~~~~~-----~~~~-----~~~~~~~~~~~D~ 87 (269)
T 4dmm_A 26 LTDRIALVTGASRGIGRAIALELAAAGA---KVAVNYASSA-----GAADEVV-----AAIA-----AAGGEAFAVKADV 87 (269)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCH-----HHHHHHH-----HHHH-----HTTCCEEEEECCT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCCh-----HHHHHHH-----HHHH-----hcCCcEEEEECCC
Confidence 5789999999999999999999999997 7888888542 2222211 1111 1235788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .+..++|
T Consensus 88 ~d~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv 161 (269)
T 4dmm_A 88 SQES------EVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRII 161 (269)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEE
Confidence 9875 6666655 78999999997642 2456778999999999999987432 2457999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... ....|+.||+..+.+.+..+. +|+++
T Consensus 162 ~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~v 203 (269)
T 4dmm_A 162 NIASVVGEMGNP--------------------------------------GQANYSAAKAGVIGLTKTVAKELASRGITV 203 (269)
T ss_dssp EECCHHHHHCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEE
T ss_pred EECchhhcCCCC--------------------------------------CchhHHHHHHHHHHHHHHHHHHHhhhCcEE
Confidence 999986542211 016899999988888766554 58999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
.+++|+.|.++.... ........ ......+..++|+|++++.++..+.. .-..|+++
T Consensus 204 n~v~PG~v~T~~~~~------------~~~~~~~~---------~~p~~r~~~~~dvA~~v~~l~s~~~~--~~itG~~i 260 (269)
T 4dmm_A 204 NAVAPGFIATDMTSE------------LAAEKLLE---------VIPLGRYGEAAEVAGVVRFLAADPAA--AYITGQVI 260 (269)
T ss_dssp EEEEECCBTTSCSCH------------HHHHHHGG---------GCTTSSCBCHHHHHHHHHHHHHCGGG--GGCCSCEE
T ss_pred EEEEECCCcCccccc------------ccHHHHHh---------cCCCCCCCCHHHHHHHHHHHhCCccc--CCCcCCEE
Confidence 999999887653211 01111111 11223567899999999988876322 01358899
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
++.+|
T Consensus 261 ~vdGG 265 (269)
T 4dmm_A 261 NIDGG 265 (269)
T ss_dssp EESTT
T ss_pred EECCC
Confidence 99887
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.6e-17 Score=163.33 Aligned_cols=211 Identities=12% Similarity=0.083 Sum_probs=145.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||+|+||++++++|++.|+ +|+++.|+... ..+.+++ .++.++.+|+
T Consensus 25 l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~--~~~~~~~-------------------~~~~~~~~Dv 80 (260)
T 3gem_A 25 LSSAPILITGASQRVGLHCALRLLEHGH---RVIISYRTEHA--SVTELRQ-------------------AGAVALYGDF 80 (260)
T ss_dssp --CCCEEESSTTSHHHHHHHHHHHHTTC---CEEEEESSCCH--HHHHHHH-------------------HTCEEEECCT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCChHH--HHHHHHh-------------------cCCeEEECCC
Confidence 5789999999999999999999999997 78899997632 1112211 1367899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFTY 171 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~ 171 (543)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .+..++|+
T Consensus 81 ~~~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~ 154 (260)
T 3gem_A 81 SCET------GIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVH 154 (260)
T ss_dssp TSHH------HHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 9875 6666654 68999999996532 1335568999999999999988542 24579999
Q ss_pred EecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh---cCCcEEE
Q psy7538 172 ISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME---LGMPCMI 248 (543)
Q Consensus 172 vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~---~~lp~~I 248 (543)
+||..+..... ....|+.||+..+.+.+..+. .++.+..
T Consensus 155 isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~ 196 (260)
T 3gem_A 155 ISDDVTRKGSS--------------------------------------KHIAYCATKAGLESLTLSFAARFAPLVKVNG 196 (260)
T ss_dssp ECCGGGGTCCS--------------------------------------SCHHHHHHHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred ECChhhcCCCC--------------------------------------CcHhHHHHHHHHHHHHHHHHHHHCCCCEEEE
Confidence 99986643211 016899999999998887665 3699999
Q ss_pred EecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEe
Q psy7538 249 LRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNL 328 (543)
Q Consensus 249 lRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni 328 (543)
++|+.|..+...+ .......... ....-+..++|+|++++.++.... ..|+++++
T Consensus 197 v~PG~v~t~~~~~-----------~~~~~~~~~~---------~p~~r~~~~edva~~v~~L~~~~~-----itG~~i~v 251 (260)
T 3gem_A 197 IAPALLMFQPKDD-----------AAYRANALAK---------SALGIEPGAEVIYQSLRYLLDSTY-----VTGTTLTV 251 (260)
T ss_dssp EEECTTCC-----------------------------------CCSCCCCCTHHHHHHHHHHHHCSS-----CCSCEEEE
T ss_pred EeecccccCCCCC-----------HHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHhhCCC-----CCCCEEEE
Confidence 9999886542210 0111111111 112234568999999998874333 35889999
Q ss_pred ecC
Q psy7538 329 TSN 331 (543)
Q Consensus 329 ~s~ 331 (543)
.+|
T Consensus 252 dGG 254 (260)
T 3gem_A 252 NGG 254 (260)
T ss_dssp STT
T ss_pred CCC
Confidence 887
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=7.7e-18 Score=167.66 Aligned_cols=233 Identities=12% Similarity=0.076 Sum_probs=155.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||+|+||++++++|++.|+ +|+++.|+... ..+++ .+.+. ....++.++.+|+
T Consensus 27 ~~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~-----~~~~~-----~~~~~-----~~~~~~~~~~~D~ 88 (283)
T 1g0o_A 27 LEGKVALVTGAGRGIGREMAMELGRRGC---KVIVNYANSTE-----SAEEV-----VAAIK-----KNGSDAACVKANV 88 (283)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSCHH-----HHHHH-----HHHHH-----HTTCCEEEEECCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCchH-----HHHHH-----HHHHH-----HhCCCeEEEEcCC
Confidence 6789999999999999999999999987 78888887521 11111 01111 1124688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc-cCCceEEEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM-KNLKCFTYI 172 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~v 172 (543)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... ++..++|++
T Consensus 89 ~~~~------~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 162 (283)
T 1g0o_A 89 GVVE------DIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILM 162 (283)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEE
Confidence 9875 5555543 68999999997643 2456778999999999999999764 345799999
Q ss_pred ecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEE
Q psy7538 173 STAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMI 248 (543)
Q Consensus 173 ST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~I 248 (543)
||..+..... .+ ...|+.||+..|.+.+..+. .|+++.+
T Consensus 163 sS~~~~~~~~--------~~-----------------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~ 205 (283)
T 1g0o_A 163 GSITGQAKAV--------PK-----------------------------HAVYSGSKGAIETFARCMAIDMADKKITVNV 205 (283)
T ss_dssp CCGGGTCSSC--------SS-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEE
T ss_pred echhhccCCC--------CC-----------------------------CcchHHHHHHHHHHHHHHHHHhcccCeEEEE
Confidence 9986543210 00 16899999999999877653 5899999
Q ss_pred EecCeeeecCCCCC-CCCCCCCC-chHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 249 LRPSIVVPIYKEPL-PGWTDNIN-GPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 249 lRps~V~G~~~~p~-~gw~d~~~-g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
++|+.|.++..... ..+..... ........+.... ......+...+|+|++++.++..... -..|+++
T Consensus 206 v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~p~~r~~~p~dvA~~v~~l~s~~~~---~itG~~i 275 (283)
T 1g0o_A 206 VAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQ-------WSPLRRVGLPIDIARVVCFLASNDGG---WVTGKVI 275 (283)
T ss_dssp EEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHH-------SCTTCSCBCHHHHHHHHHHHHSGGGT---TCCSCEE
T ss_pred EecCcccchhhhhhhhhccccccccCHHHHHHHHhhc-------CCCCCCCcCHHHHHHHHHHHhCcccc---CcCCCEE
Confidence 99999977532110 00000000 0011111111100 01123467899999999988865432 1357889
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
++.++
T Consensus 276 ~vdgG 280 (283)
T 1g0o_A 276 GIDGG 280 (283)
T ss_dssp EESTT
T ss_pred EeCCC
Confidence 88776
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.7e-17 Score=163.78 Aligned_cols=229 Identities=14% Similarity=0.088 Sum_probs=151.8
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|+||++++++|++.|+ +|+++.|+. +++++.. +.+.... ...++.++.+|+
T Consensus 11 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~------~~~~~~~-----~~~~~~~---~~~~~~~~~~D~ 73 (267)
T 1iy8_A 11 FTDRVVLITGGGSGLGRATAVRLAAEGA---KLSLVDVSS------EGLEASK-----AAVLETA---PDAEVLTTVADV 73 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH-----HHHHHHC---TTCCEEEEECCT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHH-----HHHHhhc---CCceEEEEEccC
Confidence 6789999999999999999999999986 788998864 2222211 1121110 124688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC--------cccHHHHHHHHHHHHHHHHHHH----HhccCCce
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF--------DEPIKTAVILNTRGTRDMLELS----KQMKNLKC 168 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~l~~ 168 (543)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++.+.+ ++. +..+
T Consensus 74 ~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~ 146 (267)
T 1iy8_A 74 SDEA------QVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQ-GSGM 146 (267)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCE
Confidence 9875 6666655 68999999997543 1446678999999988766655 333 5689
Q ss_pred EEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCC
Q psy7538 169 FTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGM 244 (543)
Q Consensus 169 ~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~l 244 (543)
+|++||..+..... ....|+.||+..+.+.+..+. .|+
T Consensus 147 iv~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi 188 (267)
T 1iy8_A 147 VVNTASVGGIRGIG--------------------------------------NQSGYAAAKHGVVGLTRNSAVEYGRYGI 188 (267)
T ss_dssp EEEECCGGGTSBCS--------------------------------------SBHHHHHHHHHHHHHHHHHHHHHGGGTC
T ss_pred EEEEcchhhccCCC--------------------------------------CCccHHHHHHHHHHHHHHHHHHHHhcCe
Confidence 99999986543210 016899999999998876554 589
Q ss_pred cEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCc
Q psy7538 245 PCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKS 324 (543)
Q Consensus 245 p~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~ 324 (543)
++.+++|+.|.++.........+. ............. .....+...+|+|++++.++..... -..|+
T Consensus 189 ~v~~v~PG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~---------~p~~r~~~~~dvA~~v~~l~s~~~~---~~tG~ 255 (267)
T 1iy8_A 189 RINAIAPGAIWTPMVENSMKQLDP-ENPRKAAEEFIQV---------NPSKRYGEAPEIAAVVAFLLSDDAS---YVNAT 255 (267)
T ss_dssp EEEEEEECSBCSHHHHHHHHHHCT-TCHHHHHHHHHTT---------CTTCSCBCHHHHHHHHHHHTSGGGT---TCCSC
T ss_pred EEEEEEeCCCcCcchhccccccCh-hhhhhHHHHHhcc---------CCCCCCcCHHHHHHHHHHHcCcccc---CCCCC
Confidence 999999998876532100000000 0000000011111 1123478999999999988865432 13578
Q ss_pred EEEeecC
Q psy7538 325 VCNLTSN 331 (543)
Q Consensus 325 vyni~s~ 331 (543)
++++.++
T Consensus 256 ~i~vdGG 262 (267)
T 1iy8_A 256 VVPIDGG 262 (267)
T ss_dssp EEEESTT
T ss_pred EEEECCC
Confidence 9999877
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.77 E-value=2.4e-17 Score=160.95 Aligned_cols=217 Identities=12% Similarity=0.071 Sum_probs=153.4
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||+|+||++++++|++.|. +|++..|+. ++++++.+ . ...+...+.+|+
T Consensus 7 l~gk~~lVTGas~gIG~a~a~~l~~~G~---~V~~~~r~~------~~~~~~~~-----~--------~~~~~~~~~~Dv 64 (248)
T 3op4_A 7 LEGKVALVTGASRGIGKAIAELLAERGA---KVIGTATSE------SGAQAISD-----Y--------LGDNGKGMALNV 64 (248)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEESSH------HHHHHHHH-----H--------HGGGEEEEECCT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHHH-----H--------hcccceEEEEeC
Confidence 5789999999999999999999999997 788888864 22222110 0 112467899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .+..++|
T Consensus 65 ~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv 138 (248)
T 3op4_A 65 TNPE------SIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRII 138 (248)
T ss_dssp TCHH------HHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEE
Confidence 9875 6666665 79999999997642 2456778999999999999988541 2457999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... ....|+.||+..+.+.+..+. +|+++
T Consensus 139 ~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~v 180 (248)
T 3op4_A 139 NVGSVVGTMGNA--------------------------------------GQANYAAAKAGVIGFTKSMAREVASRGVTV 180 (248)
T ss_dssp EECCHHHHHCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred EEcchhhcCCCC--------------------------------------CChHHHHHHHHHHHHHHHHHHHHHHhCeEE
Confidence 999985542211 016899999988888776554 58999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
..++|+.|..+..... .+ ........+ .....+.+++|+|++++.++..... -..|+++
T Consensus 181 n~v~PG~v~T~~~~~~--------~~-~~~~~~~~~---------~p~~r~~~p~dva~~v~~L~s~~~~---~itG~~i 239 (248)
T 3op4_A 181 NTVAPGFIETDMTKAL--------ND-EQRTATLAQ---------VPAGRLGDPREIASAVAFLASPEAA---YITGETL 239 (248)
T ss_dssp EEEEECSBSSTTTTTS--------CH-HHHHHHHHT---------CTTCSCBCHHHHHHHHHHHHSGGGT---TCCSCEE
T ss_pred EEEeeCCCCCchhhhc--------CH-HHHHHHHhc---------CCCCCCcCHHHHHHHHHHHcCCccC---CccCcEE
Confidence 9999998866533211 11 111222211 1234578899999999888765432 1358899
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
++.++
T Consensus 240 ~vdgG 244 (248)
T 3op4_A 240 HVNGG 244 (248)
T ss_dssp EESTT
T ss_pred EECCC
Confidence 99876
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.4e-17 Score=163.02 Aligned_cols=224 Identities=11% Similarity=0.093 Sum_probs=150.9
Q ss_pred hhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEE
Q psy7538 25 AKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVIS 104 (543)
Q Consensus 25 ~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~ 104 (543)
....++|+|+||||+|+||++++++|++.|. +|+++.|..... ..+.++++ .....++.++.
T Consensus 8 ~~~~~~k~vlITGas~giG~~ia~~l~~~G~---~v~~~~~~~~~~-~~~~~~~~--------------~~~~~~~~~~~ 69 (256)
T 3ezl_A 8 HMVMSQRIAYVTGGMGGIGTSICQRLHKDGF---RVVAGCGPNSPR-RVKWLEDQ--------------KALGFDFYASE 69 (256)
T ss_dssp -----CEEEEETTTTSHHHHHHHHHHHHTTE---EEEEEECTTCSS-HHHHHHHH--------------HHTTCCCEEEE
T ss_pred CCCCCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCCHHH-HHHHHHHH--------------HhcCCeeEEEe
Confidence 4567899999999999999999999999986 777777443221 12222221 11234788999
Q ss_pred ccCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCc
Q psy7538 105 GDITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLK 167 (543)
Q Consensus 105 gDl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~ 167 (543)
+|+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .+..
T Consensus 70 ~Dv~~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g 143 (256)
T 3ezl_A 70 GNVGDWD------STKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWG 143 (256)
T ss_dssp CCTTCHH------HHHHHHHHHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred cCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Confidence 9999875 5666654 68999999997642 2456678999999988887776331 2557
Q ss_pred eEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cC
Q psy7538 168 CFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LG 243 (543)
Q Consensus 168 ~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~ 243 (543)
++|++||..+..... ....|+.||+..+.+.+..+. .+
T Consensus 144 ~iv~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~g 185 (256)
T 3ezl_A 144 RIINISSVNGQKGQF--------------------------------------GQTNYSTAKAGIHGFTMSLAQEVATKG 185 (256)
T ss_dssp EEEEECCCCGGGSCS--------------------------------------CCHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred EEEEEcchhhccCCC--------------------------------------CCcccHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999986543211 016899999988888876554 58
Q ss_pred CcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCC
Q psy7538 244 MPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERK 323 (543)
Q Consensus 244 lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~ 323 (543)
+.+.+++|+.|..+.... .. ......+... .....+...+|+|++++.++..... ...|
T Consensus 186 i~v~~v~PG~v~t~~~~~--------~~-~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~s~~~~---~~tG 244 (256)
T 3ezl_A 186 VTVNTVSPGYIGTDMVKA--------IR-PDVLEKIVAT---------IPVRRLGSPDEIGSIVAWLASEESG---FSTG 244 (256)
T ss_dssp EEEEEEEECSBCCHHHHT--------SC-HHHHHHHHHH---------STTSSCBCHHHHHHHHHHHHSGGGT---TCCS
T ss_pred CEEEEEEECcccCccccc--------cC-HHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCCccc---CCcC
Confidence 999999999886653321 11 1122222221 1223567899999999888754432 1358
Q ss_pred cEEEeecC
Q psy7538 324 SVCNLTSN 331 (543)
Q Consensus 324 ~vyni~s~ 331 (543)
+++++.++
T Consensus 245 ~~i~vdgG 252 (256)
T 3ezl_A 245 ADFSLNGG 252 (256)
T ss_dssp CEEEESTT
T ss_pred cEEEECCC
Confidence 89999887
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=4.7e-18 Score=166.44 Aligned_cols=234 Identities=9% Similarity=-0.065 Sum_probs=144.1
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|+||||+|+||++++++|++.|+ +|+++.|+.... . . .+.+|++++
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~---~V~~~~r~~~~~-----------------------~---~---~~~~Dl~~~ 49 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGH---QIVGIDIRDAEV-----------------------I---A---DLSTAEGRK 49 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSSSSE-----------------------E---C---CTTSHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCchhh-----------------------c---c---ccccCCCCH
Confidence 6899999999999999999999987 789999975321 0 0 156788776
Q ss_pred CCCCCHHHHHHHhc----CccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhc---cCCceEEEEecCccccCCCc
Q psy7538 111 KLGISEIDKKELID----NVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQM---KNLKCFTYISTAYCHPSEKV 183 (543)
Q Consensus 111 ~lgls~~~~~~l~~----~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~vST~y~~~~~~~ 183 (543)
+ +++.+++ ++|+|||+||......+++..+++|+.|+.++++++... .+..++|++||..+......
T Consensus 50 ~------~v~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~ 123 (257)
T 1fjh_A 50 Q------AIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFD 123 (257)
T ss_dssp H------HHHHHHTTCTTCCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGG
T ss_pred H------HHHHHHHHhCCCCCEEEECCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccc
Confidence 4 6777775 459999999987645668899999999999999988642 24579999999976532110
Q ss_pred ccccccCCCCChHHHHHHHhhcchhhhhhhhhh-ccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEEEecCeeeecC
Q psy7538 184 LEERTYLPPDDPHQVILRAESMKEEDLEVFRQD-ILGEFPNSYAYTKCLAEGLVAECME----LGMPCMILRPSIVVPIY 258 (543)
Q Consensus 184 i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~IlRps~V~G~~ 258 (543)
. + ..+..... -+.+........ ........|+.||+..|.+.+..+. .++.+.+++|+.|.++.
T Consensus 124 ~-------~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 192 (257)
T 1fjh_A 124 K-------N-PLALALEA---GEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPL 192 (257)
T ss_dssp G-------C-TTHHHHHH---TCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----
T ss_pred c-------c-hhhhhhcc---cchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcc
Confidence 0 0 00000000 000000000000 0000115899999999999877554 58999999999987764
Q ss_pred CCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecC
Q psy7538 259 KEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSN 331 (543)
Q Consensus 259 ~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~ 331 (543)
.... . ........... + ......+++++|+|++++.++..... ...|+++++.++
T Consensus 193 ~~~~-------~-~~~~~~~~~~~----~---~~~~~~~~~~~dvA~~~~~l~~~~~~---~~tG~~~~vdgG 247 (257)
T 1fjh_A 193 LQAG-------L-QDPRYGESIAK----F---VPPMGRRAEPSEMASVIAFLMSPAAS---YVHGAQIVIDGG 247 (257)
T ss_dssp ----------------------------C---CCSTTSCCCTHHHHHHHHHHTSGGGT---TCCSCEEEESTT
T ss_pred chhh-------c-cchhHHHHHHh----c---ccccCCCCCHHHHHHHHHHHhCchhc---CCcCCEEEECCC
Confidence 3210 0 00000000000 0 11122478999999999988865432 135788988876
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.3e-17 Score=165.66 Aligned_cols=229 Identities=13% Similarity=0.101 Sum_probs=154.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|+||++++++|++.|. +|+++.|+. +++++.. +.++ ....++.++.+|+
T Consensus 22 ~~~k~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~------~~~~~~~-----~~l~-----~~~~~~~~~~~Dv 82 (279)
T 3sju_A 22 SRPQTAFVTGVSSGIGLAVARTLAARGI---AVYGCARDA------KNVSAAV-----DGLR-----AAGHDVDGSSCDV 82 (279)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH-----HHHH-----TTTCCEEEEECCT
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHH-----HHHH-----hcCCcEEEEECCC
Confidence 5789999999999999999999999987 788998864 2232211 1121 2235789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHh---c--cCCce
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQ---M--KNLKC 168 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~---~--~~l~~ 168 (543)
++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++++++.. + .+..+
T Consensus 83 ~d~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~ 156 (279)
T 3sju_A 83 TSTD------EVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGR 156 (279)
T ss_dssp TCHH------HHHHHHHHHHHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcE
Confidence 9875 6665554 68999999997642 244667899999999999998865 2 24579
Q ss_pred EEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCC
Q psy7538 169 FTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGM 244 (543)
Q Consensus 169 ~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~l 244 (543)
+|++||..+..... ....|+.||+..+.+.+..+. +|+
T Consensus 157 iV~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi 198 (279)
T 3sju_A 157 IVNIASTGGKQGVM--------------------------------------YAAPYTASKHGVVGFTKSVGFELAKTGI 198 (279)
T ss_dssp EEEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTE
T ss_pred EEEECChhhccCCC--------------------------------------CChhHHHHHHHHHHHHHHHHHHHHhhCc
Confidence 99999986643211 016899999988888876654 589
Q ss_pred cEEEEecCeeeecCCCCCCC-CCCCCC-chHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCC
Q psy7538 245 PCMILRPSIVVPIYKEPLPG-WTDNIN-GPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322 (543)
Q Consensus 245 p~~IlRps~V~G~~~~p~~g-w~d~~~-g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~ 322 (543)
++.+++|+.|.++..+.... +..... ........... ......+..++|+|++++.++..... -..
T Consensus 199 ~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~p~~r~~~pedvA~~v~~L~s~~a~---~it 266 (279)
T 3sju_A 199 TVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNA---------KIPLGRYSTPEEVAGLVGYLVTDAAA---SIT 266 (279)
T ss_dssp EEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHT---------TCTTSSCBCHHHHHHHHHHHTSSGGG---GCC
T ss_pred EEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHh---------cCCCCCCCCHHHHHHHHHHHhCcccc---CcC
Confidence 99999999886653211000 000000 11112222222 12234567899999999988765432 135
Q ss_pred CcEEEeecC
Q psy7538 323 KSVCNLTSN 331 (543)
Q Consensus 323 ~~vyni~s~ 331 (543)
|+++++.+|
T Consensus 267 G~~i~vdGG 275 (279)
T 3sju_A 267 AQALNVCGG 275 (279)
T ss_dssp SCEEEESTT
T ss_pred CcEEEECCC
Confidence 889999877
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.76 E-value=2.3e-17 Score=161.69 Aligned_cols=225 Identities=13% Similarity=0.158 Sum_probs=157.0
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||+|+||++++++|++.|. +|+++.|+. ++++++.+ + ...++.++.+|+
T Consensus 6 l~gk~~lVTGas~gIG~a~a~~l~~~G~---~V~~~~r~~------~~~~~~~~---------~----~~~~~~~~~~Dv 63 (255)
T 4eso_A 6 YQGKKAIVIGGTHGMGLATVRRLVEGGA---EVLLTGRNE------SNIARIRE---------E----FGPRVHALRSDI 63 (255)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHHH---------H----HGGGEEEEECCT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHHH---------H----hCCcceEEEccC
Confidence 6789999999999999999999999987 889999863 33332211 1 124688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc-cCCceEEEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM-KNLKCFTYI 172 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~v 172 (543)
++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++++++... ..-.++|++
T Consensus 64 ~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~i 137 (255)
T 4eso_A 64 ADLN------EIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFT 137 (255)
T ss_dssp TCHH------HHHHHHHHHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 9875 5555543 68999999997642 2446678999999999999999763 223589999
Q ss_pred ecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEE
Q psy7538 173 STAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMI 248 (543)
Q Consensus 173 ST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~I 248 (543)
||..+..... ....|+.||+..+.+.+..+. +|+++..
T Consensus 138 sS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~ 179 (255)
T 4eso_A 138 SSVADEGGHP--------------------------------------GMSVYSASKAALVSFASVLAAELLPRGIRVNS 179 (255)
T ss_dssp CCGGGSSBCT--------------------------------------TBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEE
T ss_pred CChhhcCCCC--------------------------------------CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEE
Confidence 9986643211 016899999999998877655 5899999
Q ss_pred EecCeeeecCCCCCCCCCCCCCch-H-HHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 249 LRPSIVVPIYKEPLPGWTDNINGP-T-GLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 249 lRps~V~G~~~~p~~gw~d~~~g~-~-~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
++|+.|..+..... ..... . .+...... ......+..++|+|++++.++.. .. -..|+++
T Consensus 180 v~PG~v~T~~~~~~-----~~~~~~~~~~~~~~~~---------~~p~~r~~~pedvA~~v~~L~s~-~~---~itG~~i 241 (255)
T 4eso_A 180 VSPGFIDTPTKGVA-----GITEAERAEFKTLGDN---------ITPMKRNGTADEVARAVLFLAFE-AT---FTTGAKL 241 (255)
T ss_dssp EEECSBCCSSTTCT-----TSCHHHHHHHHHHHHH---------HSTTSSCBCHHHHHHHHHHHHHT-CT---TCCSCEE
T ss_pred EecCcccCcccccc-----cCChhhHHHHHHHHhc---------cCCCCCCcCHHHHHHHHHHHcCc-Cc---CccCCEE
Confidence 99999977643210 00100 0 11111111 11223467899999999887765 22 1358899
Q ss_pred EeecCCCCcccH
Q psy7538 327 NLTSNKDYKITW 338 (543)
Q Consensus 327 ni~s~~~~~~t~ 338 (543)
++.++ ...++
T Consensus 242 ~vdGG--~~~~l 251 (255)
T 4eso_A 242 AVDGG--LGQKL 251 (255)
T ss_dssp EESTT--TTTTB
T ss_pred EECCC--ccccC
Confidence 99988 44443
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.76 E-value=7e-18 Score=170.99 Aligned_cols=220 Identities=16% Similarity=0.113 Sum_probs=138.5
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+||||||||+||++++++|++.|+ +|++..|+.. +++++. +.+... ....++.++.+|+
T Consensus 6 l~~k~vlVTGas~gIG~~la~~l~~~G~---~Vv~~~r~~~------~~~~~~-----~~l~~~---~~~~~~~~~~~Dl 68 (319)
T 3ioy_A 6 FAGRTAFVTGGANGVGIGLVRQLLNQGC---KVAIADIRQD------SIDKAL-----ATLEAE---GSGPEVMGVQLDV 68 (319)
T ss_dssp CTTCEEEEETTTSTHHHHHHHHHHHTTC---EEEEEESCHH------HHHHHH-----HHHHHH---TCGGGEEEEECCT
T ss_pred CCCCEEEEcCCchHHHHHHHHHHHHCCC---EEEEEECCHH------HHHHHH-----HHHHhc---CCCCeEEEEECCC
Confidence 4789999999999999999999999997 7899999742 222211 111111 1123789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhcc---------
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQMK--------- 164 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~--------- 164 (543)
++++ +++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++++...-
T Consensus 69 ~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~ 142 (319)
T 3ioy_A 69 ASRE------GFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQ 142 (319)
T ss_dssp TCHH------HHHHHHHHHHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred CCHH------HHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCC
Confidence 9875 6666654 67999999996532 24466789999999999999886531
Q ss_pred CCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHH----HHHHHHHHHh
Q psy7538 165 NLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKC----LAEGLVAECM 240 (543)
Q Consensus 165 ~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~----~aE~~v~~~~ 240 (543)
+-.++|++||..+..... ....|+.||+ ++|.+..++.
T Consensus 143 ~~g~iV~isS~a~~~~~~--------------------------------------~~~~Y~aSKaal~~~~~~la~e~~ 184 (319)
T 3ioy_A 143 KGGHVVNTASMAAFLAAG--------------------------------------SPGIYNTTKFAVRGLSESLHYSLL 184 (319)
T ss_dssp CCCEEEEECCGGGTCCCS--------------------------------------SSHHHHHHHHHHHHHHHHHHHHHG
T ss_pred CCcEEEEecccccccCCC--------------------------------------CCHHHHHHHHHHHHHHHHHHHHhh
Confidence 235799999986654311 1168999999 4554444444
Q ss_pred hcCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeec-CCcccccchHHHHHHHHHHHhhhhc
Q psy7538 241 ELGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCK-NTGMADFLPADVAINGVFLFTWDFL 315 (543)
Q Consensus 241 ~~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~-~~~~~d~V~vddva~a~i~a~~~~~ 315 (543)
..|+.+++++|+.|.++...+.. ..+. .+.............. .......++++|+|++++.++....
T Consensus 185 ~~gi~v~~v~PG~v~T~~~~~~~------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~pe~vA~~~~~al~~~~ 253 (319)
T 3ioy_A 185 KYEIGVSVLCPGLVKSYIYASDD------IRPD-ALKGEVKPVDKTAVERLAGVHEFGMEPDVIGARVIEAMKANR 253 (319)
T ss_dssp GGTCEEEEECCCCBC------------------------------------CCGGGSSBCHHHHHHHHHHHHHTTC
T ss_pred hcCCEEEEEEcCeEccCcccccc------cCch-hhcccccchhHHHHHHHHHhhhcCCCHHHHHHHHHHHHHcCC
Confidence 46899999999999776433211 0000 0000000000000001 1111122799999999999987643
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.76 E-value=9.9e-18 Score=164.43 Aligned_cols=213 Identities=15% Similarity=0.146 Sum_probs=149.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|+||++++++|++.|+ +|+++.|.. ++..+ ....++.++.+|+
T Consensus 7 l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~-----~~~~~-----------------~~~~~~~~~~~D~ 61 (257)
T 3tl3_A 7 IRDAVAVVTGGASGLGLATTKRLLDAGA---QVVVLDIRG-----EDVVA-----------------DLGDRARFAAADV 61 (257)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHHTC---EEEEEESSC-----HHHHH-----------------HTCTTEEEEECCT
T ss_pred ecCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCch-----HHHHH-----------------hcCCceEEEECCC
Confidence 5789999999999999999999999997 888998843 11111 1134788999999
Q ss_pred CCCCCCCCHHHHHHHhc------CccEEEEcCccCC-----------CcccHHHHHHHHHHHHHHHHHHHHhc-------
Q psy7538 108 TQLKLGISEIDKKELID------NVDIVYHVAATIR-----------FDEPIKTAVILNTRGTRDMLELSKQM------- 163 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~------~vd~ViH~AA~v~-----------~~~~~~~~~~~Nv~gt~~ll~~a~~~------- 163 (543)
++++ +++.+++ .+|++||+||... ..+.++..+++|+.|+.++++++...
T Consensus 62 ~~~~------~v~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~ 135 (257)
T 3tl3_A 62 TDEA------AVASALDLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPV 135 (257)
T ss_dssp TCHH------HHHHHHHHHHHHSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC
T ss_pred CCHH------HHHHHHHHHHHhCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhccc
Confidence 9875 6666655 7999999999642 12456778999999999999998753
Q ss_pred ----cCCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHH
Q psy7538 164 ----KNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAEC 239 (543)
Q Consensus 164 ----~~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~ 239 (543)
.+-.++|++||..+..... + ...|+.||+..+.+.+..
T Consensus 136 ~~~~~~~g~iv~isS~~~~~~~~--------------------------------~------~~~Y~asKaa~~~~~~~l 177 (257)
T 3tl3_A 136 GPNAEERGVIINTASVAAFDGQI--------------------------------G------QAAYSASKGGVVGMTLPI 177 (257)
T ss_dssp --CCCCSEEEEEECCCC--CCHH--------------------------------H------HHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCcEEEEEcchhhcCCCC--------------------------------C------CccHHHHHHHHHHHHHHH
Confidence 1235899999986643210 0 058999999888887765
Q ss_pred hh----cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhc
Q psy7538 240 ME----LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFL 315 (543)
Q Consensus 240 ~~----~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~ 315 (543)
+. +++.+..++|+.|..+..... +............ ....+...+|+|++++.++....
T Consensus 178 a~e~~~~gI~vn~v~PG~v~T~~~~~~---------~~~~~~~~~~~~~--------~~~r~~~p~dva~~v~~l~s~~~ 240 (257)
T 3tl3_A 178 ARDLASHRIRVMTIAPGLFDTPLLASL---------PEEARASLGKQVP--------HPSRLGNPDEYGALAVHIIENPM 240 (257)
T ss_dssp HHHHGGGTEEEEEEEECSBCCTTC------------CHHHHHHHHHTSS--------SSCSCBCHHHHHHHHHHHHHCTT
T ss_pred HHHhcccCcEEEEEEecCccChhhhhc---------cHHHHHHHHhcCC--------CCCCccCHHHHHHHHHHHhcCCC
Confidence 54 589999999998866533211 1112222222111 11357789999999998887643
Q ss_pred ccCCCCCCcEEEeecC
Q psy7538 316 NSKESERKSVCNLTSN 331 (543)
Q Consensus 316 ~~~~~~~~~vyni~s~ 331 (543)
. .|+++++.++
T Consensus 241 i-----tG~~i~vdGG 251 (257)
T 3tl3_A 241 L-----NGEVIRLDGA 251 (257)
T ss_dssp C-----CSCEEEESTT
T ss_pred C-----CCCEEEECCC
Confidence 3 6889999887
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=1.1e-17 Score=167.85 Aligned_cols=240 Identities=13% Similarity=0.111 Sum_probs=160.5
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|+||++++++|++.|+ +|+++.|+. +++++.. +.+.... ....++.++.+|+
T Consensus 24 l~~k~vlVTGas~gIG~aia~~L~~~G~---~V~~~~r~~------~~~~~~~-----~~l~~~~--~~~~~~~~~~~Dv 87 (297)
T 1xhl_A 24 FSGKSVIITGSSNGIGRSAAVIFAKEGA---QVTITGRNE------DRLEETK-----QQILKAG--VPAEKINAVVADV 87 (297)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH-----HHHHHTT--CCGGGEEEEECCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHH-----HHHHhcC--CCCceEEEEecCC
Confidence 6789999999999999999999999987 788999864 2222211 1121111 0012688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC---------cccHHHHHHHHHHHHHHHHHHHHhc---cCCce
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF---------DEPIKTAVILNTRGTRDMLELSKQM---KNLKC 168 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~---------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~ 168 (543)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... .+ .+
T Consensus 88 ~d~~------~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~ 160 (297)
T 1xhl_A 88 TEAS------GQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GE 160 (297)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CE
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CE
Confidence 9875 6666654 79999999996432 1345678999999999999888653 23 79
Q ss_pred EEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCC
Q psy7538 169 FTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGM 244 (543)
Q Consensus 169 ~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~l 244 (543)
+|++||..+..... | ....|+.||+..+.+.+..+. .|+
T Consensus 161 IV~isS~~~~~~~~---------~----------------------------~~~~Y~asKaa~~~l~~~la~el~~~gI 203 (297)
T 1xhl_A 161 IVNVSSIVAGPQAH---------S----------------------------GYPYYACAKAALDQYTRCTAIDLIQHGV 203 (297)
T ss_dssp EEEECCGGGSSSCC---------T----------------------------TSHHHHHHHHHHHHHHHHHHHHHGGGTC
T ss_pred EEEEcCchhccCCC---------C----------------------------CcchHHHHHHHHHHHHHHHHHHhcccCe
Confidence 99999986643210 0 016899999999998877653 589
Q ss_pred cEEEEecCeeeecCCCCCCCCCCCCCch-----HHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhh-cccC
Q psy7538 245 PCMILRPSIVVPIYKEPLPGWTDNINGP-----TGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDF-LNSK 318 (543)
Q Consensus 245 p~~IlRps~V~G~~~~p~~gw~d~~~g~-----~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~-~~~~ 318 (543)
++.++||+.|.++...... .... ......... ......+..++|+|++++.++... .. .
T Consensus 204 ~v~~v~PG~v~T~~~~~~~-----~~~~~~~~~~~~~~~~~~---------~~p~~r~~~pedvA~~v~~l~s~~~~~-~ 268 (297)
T 1xhl_A 204 RVNSVSPGAVATGFMGAMG-----LPETASDKLYSFIGSRKE---------CIPVGHCGKPEEIANIIVFLADRNLSS-Y 268 (297)
T ss_dssp EEEEEEECCBCSSHHHHTT-----CCHHHHHHHHHHHHHCTT---------TCTTSSCBCHHHHHHHHHHHHCHHHHT-T
T ss_pred EEEEEeeCCCcCccccccc-----cccccccchHHHHHHHHh---------cCCCCCCcCHHHHHHHHHHHhCCcccC-C
Confidence 9999999998765321100 0000 001111111 111235789999999999888654 21 1
Q ss_pred CCCCCcEEEeecCCCCcccHHHHHHHHh
Q psy7538 319 ESERKSVCNLTSNKDYKITWQEICDIGK 346 (543)
Q Consensus 319 ~~~~~~vyni~s~~~~~~t~~e~~~~i~ 346 (543)
..|+++++.++ ..+.+.+....+.
T Consensus 269 --itG~~i~vdGG--~~~~~~~~~~~~~ 292 (297)
T 1xhl_A 269 --IIGQSIVADGG--STLVMGMQTHDLM 292 (297)
T ss_dssp --CCSCEEEESTT--GGGCCGGGGSCHH
T ss_pred --ccCcEEEECCC--ccccccccccchh
Confidence 25889999887 5555555444333
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.1e-17 Score=162.73 Aligned_cols=218 Identities=14% Similarity=0.105 Sum_probs=151.3
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHh-hCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILR-LEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~-~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++|+++||||+|+||++++++|++ .|. .|.+..|.... ...++.++.+|+
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~~~g~---~v~~~~~~~~~--------------------------~~~~~~~~~~Dv 53 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQNKNH---TVINIDIQQSF--------------------------SAENLKFIKADL 53 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTSTTE---EEEEEESSCCC--------------------------CCTTEEEEECCT
T ss_pred CCCeEEEeCCCChHHHHHHHHHHhcCCc---EEEEecccccc--------------------------ccccceEEecCc
Confidence 678999999999999999999999 654 78888886531 224678999999
Q ss_pred CCCCCCCCHHHHHHHhc-----CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc-cCCceEEEEec
Q psy7538 108 TQLKLGISEIDKKELID-----NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM-KNLKCFTYIST 174 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-----~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~vST 174 (543)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... ..-.++|++||
T Consensus 54 ~~~~------~v~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS 127 (244)
T 4e4y_A 54 TKQQ------DITNVLDIIKNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGS 127 (244)
T ss_dssp TCHH------HHHHHHHHTTTCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECC
T ss_pred CCHH------HHHHHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECC
Confidence 9875 6776665 68999999997532 2456678999999999999998764 11148999999
Q ss_pred CccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEEEe
Q psy7538 175 AYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMILR 250 (543)
Q Consensus 175 ~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~IlR 250 (543)
..+...... ...|+.||+..+.+.+..+. +|+++.+++
T Consensus 128 ~~~~~~~~~--------------------------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~ 169 (244)
T 4e4y_A 128 DQCFIAKPN--------------------------------------SFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVC 169 (244)
T ss_dssp GGGTCCCTT--------------------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEE
T ss_pred HHHccCCCC--------------------------------------CchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEe
Confidence 866432110 15899999999999887654 589999999
Q ss_pred cCeeeecCCCCCCCC-CCC-CCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEe
Q psy7538 251 PSIVVPIYKEPLPGW-TDN-INGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNL 328 (543)
Q Consensus 251 ps~V~G~~~~p~~gw-~d~-~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni 328 (543)
|+.|.++.......- ... -..+....... ........+.+++|+|++++.++..... -..|+++++
T Consensus 170 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~p~~r~~~p~dvA~~v~~l~s~~~~---~itG~~i~v 237 (244)
T 4e4y_A 170 PGTVDTDLYRNLIQKYANNVGISFDEAQKQE---------EKEFPLNRIAQPQEIAELVIFLLSDKSK---FMTGGLIPI 237 (244)
T ss_dssp ESCBCCHHHHHHHHHHHHHHTCCHHHHHHHH---------HTTSTTSSCBCHHHHHHHHHHHHSGGGT---TCCSCEEEE
T ss_pred cCccCchhhHHHHHhhhhhcCCCHHHHHHHH---------hhcCCCCCCcCHHHHHHHHHHHhcCccc---cccCCeEeE
Confidence 998866532100000 000 00000011111 1122334578899999999988865432 135889999
Q ss_pred ecC
Q psy7538 329 TSN 331 (543)
Q Consensus 329 ~s~ 331 (543)
.+|
T Consensus 238 dGG 240 (244)
T 4e4y_A 238 DGG 240 (244)
T ss_dssp STT
T ss_pred CCC
Confidence 876
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=2.2e-17 Score=159.85 Aligned_cols=203 Identities=11% Similarity=0.111 Sum_probs=144.4
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||+|+||++++++|++.|+ +|+++.|+.... .....++.+|+
T Consensus 1 m~~k~vlITGas~gIG~~~a~~l~~~G~---~V~~~~r~~~~~--------------------------~~~~~~~~~D~ 51 (236)
T 1ooe_A 1 MSSGKVIVYGGKGALGSAILEFFKKNGY---TVLNIDLSANDQ--------------------------ADSNILVDGNK 51 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHTTE---EEEEEESSCCTT--------------------------SSEEEECCTTS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEecCcccc--------------------------ccccEEEeCCC
Confidence 3679999999999999999999999986 889999976431 12456778999
Q ss_pred CCCCCCCCHHHHHHHhc---------CccEEEEcCccCCC--------cccHHHHHHHHHHHHHHHHHHHHhc-cCCceE
Q psy7538 108 TQLKLGISEIDKKELID---------NVDIVYHVAATIRF--------DEPIKTAVILNTRGTRDMLELSKQM-KNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~---------~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~ 169 (543)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... ..-.++
T Consensus 52 ~~~~------~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~i 125 (236)
T 1ooe_A 52 NWTE------QEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLL 125 (236)
T ss_dssp CHHH------HHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEE
T ss_pred CCHH------HHHHHHHHHHHHhCCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEE
Confidence 9865 5555543 79999999996431 2345668999999999999998763 112589
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh------cC
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME------LG 243 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~------~~ 243 (543)
|++||..+..... + ...|+.||+..+.+.+..+. .+
T Consensus 126 v~isS~~~~~~~~---------~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~~~g 167 (236)
T 1ooe_A 126 QLTGAAAAMGPTP---------S-----------------------------MIGYGMAKAAVHHLTSSLAAKDSGLPDN 167 (236)
T ss_dssp EEECCGGGGSCCT---------T-----------------------------BHHHHHHHHHHHHHHHHHHSTTSSCCTT
T ss_pred EEECchhhccCCC---------C-----------------------------cHHHHHHHHHHHHHHHHHHHHhcccCCC
Confidence 9999986643211 0 16899999999999987654 25
Q ss_pred CcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCC
Q psy7538 244 MPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERK 323 (543)
Q Consensus 244 lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~ 323 (543)
+.+.++||+.|.++. ....... ......++.+|+|++++..+..... ....|
T Consensus 168 i~v~~v~Pg~v~t~~-----------------~~~~~~~---------~~~~~~~~~~dvA~~i~~~l~s~~~--~~~~G 219 (236)
T 1ooe_A 168 SAVLTIMPVTLDTPM-----------------NRKWMPN---------ADHSSWTPLSFISEHLLKWTTETSS--RPSSG 219 (236)
T ss_dssp CEEEEEEESCBCCHH-----------------HHHHSTT---------CCGGGCBCHHHHHHHHHHHHHCGGG--CCCTT
T ss_pred eEEEEEecCcccCcc-----------------hhhcCCC---------ccccccCCHHHHHHHHHHHHcCCCc--ccccc
Confidence 899999999875542 1111110 1123467889999999866533322 11357
Q ss_pred cEEEeecC
Q psy7538 324 SVCNLTSN 331 (543)
Q Consensus 324 ~vyni~s~ 331 (543)
+.+++.++
T Consensus 220 ~~~~v~gg 227 (236)
T 1ooe_A 220 ALLKITTE 227 (236)
T ss_dssp CEEEEEEE
T ss_pred cEEEEecC
Confidence 78888765
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.9e-17 Score=161.42 Aligned_cols=222 Identities=10% Similarity=0.085 Sum_probs=147.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||+|+||++++++|++.|. +|+++.|.... ..+...+ .+ .....++.++.+|+
T Consensus 6 l~~k~vlVTGas~GIG~aia~~la~~G~---~V~~~~~~~~~--~~~~~~~--------~~-----~~~~~~~~~~~~Dv 67 (259)
T 3edm_A 6 FTNRTIVVAGAGRDIGRACAIRFAQEGA---NVVLTYNGAAE--GAATAVA--------EI-----EKLGRSALAIKADL 67 (259)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECSSCH--HHHHHHH--------HH-----HTTTSCCEEEECCT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEcCCCHH--HHHHHHH--------HH-----HhcCCceEEEEcCC
Confidence 5789999999999999999999999987 77777554321 1111111 11 12235688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCC----C----cccHHHHHHHHHHHHHHHHHHHHhc-cCCceEEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIR----F----DEPIKTAVILNTRGTRDMLELSKQM-KNLKCFTY 171 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~ 171 (543)
++++ +++.+++ ++|++||+||... + .+.++..+++|+.|+.++++++... ..-.++|+
T Consensus 68 ~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~ 141 (259)
T 3edm_A 68 TNAA------EVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVT 141 (259)
T ss_dssp TCHH------HHHHHHHHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEE
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEE
Confidence 9875 6666655 6899999998651 1 2345678999999999999999764 11248999
Q ss_pred EecCccc-cCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh---cCCcEE
Q psy7538 172 ISTAYCH-PSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME---LGMPCM 247 (543)
Q Consensus 172 vST~y~~-~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~---~~lp~~ 247 (543)
+||..+. .... ....|+.||+..+.+.+..+. .++.+.
T Consensus 142 isS~~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~I~vn 183 (259)
T 3edm_A 142 FSSQAGRDGGGP--------------------------------------GALAYATSKGAVMTFTRGLAKEVGPKIRVN 183 (259)
T ss_dssp ECCHHHHHCCST--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHTTTCEEE
T ss_pred EcCHHhccCCCC--------------------------------------CcHHHHHHHHHHHHHHHHHHHHHCCCCEEE
Confidence 9998654 2110 016899999999999887665 248999
Q ss_pred EEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEE
Q psy7538 248 ILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCN 327 (543)
Q Consensus 248 IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyn 327 (543)
.+.|+.|..+...... .+ .... ..........+..++|+|++++.++..... -..|++++
T Consensus 184 ~v~PG~v~T~~~~~~~-------~~-~~~~---------~~~~~~p~~r~~~pedva~~v~~L~s~~~~---~itG~~i~ 243 (259)
T 3edm_A 184 AVCPGMISTTFHDTFT-------KP-EVRE---------RVAGATSLKREGSSEDVAGLVAFLASDDAA---YVTGACYD 243 (259)
T ss_dssp EEEECCBCC---------------------------------------CCBCHHHHHHHHHHHHSGGGT---TCCSCEEE
T ss_pred EEEECCCcCccccccc-------Ch-HHHH---------HHHhcCCCCCCcCHHHHHHHHHHHcCcccc---CccCCEEE
Confidence 9999988665332110 00 0101 011122334567899999999888765432 13588999
Q ss_pred eecC
Q psy7538 328 LTSN 331 (543)
Q Consensus 328 i~s~ 331 (543)
+.++
T Consensus 244 vdGg 247 (259)
T 3edm_A 244 INGG 247 (259)
T ss_dssp ESBC
T ss_pred ECCC
Confidence 9887
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.76 E-value=3.9e-18 Score=168.80 Aligned_cols=223 Identities=11% Similarity=0.091 Sum_probs=155.0
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
-++||+++||||+|+||++++++|++.|. +|+++.|.. +++++.. +.++ ....++.++.+|
T Consensus 23 ~l~gk~~lVTGas~gIG~aia~~la~~G~---~V~~~~r~~------~~~~~~~-----~~l~-----~~~~~~~~~~~D 83 (271)
T 4ibo_A 23 DLGGRTALVTGSSRGLGRAMAEGLAVAGA---RILINGTDP------SRVAQTV-----QEFR-----NVGHDAEAVAFD 83 (271)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEECCSCH------HHHHHHH-----HHHH-----HTTCCEEECCCC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHH-----HHHH-----hcCCceEEEEcC
Confidence 36899999999999999999999999986 788888863 2232211 1111 123578899999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceE
Q psy7538 107 ITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCF 169 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~ 169 (543)
+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++.+++... .+..++
T Consensus 84 v~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~i 157 (271)
T 4ibo_A 84 VTSES------EIIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKI 157 (271)
T ss_dssp TTCHH------HHHHHHHHHHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred CCCHH------HHHHHHHHHHHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEE
Confidence 99875 6666665 69999999997532 2446678999999999998877543 245699
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+..... ....|+.||+..+.+.+..+. +|++
T Consensus 158 V~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~ 199 (271)
T 4ibo_A 158 VNIGSLTSELARA--------------------------------------TVAPYTVAKGGIKMLTRAMAAEWAQYGIQ 199 (271)
T ss_dssp EEECCGGGTSBCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred EEEccHHhCCCCC--------------------------------------CchhHHHHHHHHHHHHHHHHHHHhhhCeE
Confidence 9999985542211 016899999999999877654 5899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
+..++|+.|..+...... ...........+ .....+..++|+|++++.++..... -..|++
T Consensus 200 vn~v~PG~v~T~~~~~~~-------~~~~~~~~~~~~---------~p~~r~~~pedva~~v~~L~s~~~~---~itG~~ 260 (271)
T 4ibo_A 200 ANAIGPGYMLTDMNQALI-------DNPEFDAWVKAR---------TPAKRWGKPQELVGTAVFLSASASD---YVNGQI 260 (271)
T ss_dssp EEEEEECSBCSGGGHHHH-------HCHHHHHHHHHH---------STTCSCBCGGGGHHHHHHHHSGGGT---TCCSCE
T ss_pred EEEEEeccEeCcchhhcc-------cCHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCcccc---CCCCcE
Confidence 999999988765322100 000111111111 1223467789999999887765432 135889
Q ss_pred EEeecC
Q psy7538 326 CNLTSN 331 (543)
Q Consensus 326 yni~s~ 331 (543)
+++.+|
T Consensus 261 i~vdGG 266 (271)
T 4ibo_A 261 IYVDGG 266 (271)
T ss_dssp EEESTT
T ss_pred EEECCC
Confidence 999887
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.3e-17 Score=163.69 Aligned_cols=221 Identities=11% Similarity=0.089 Sum_probs=150.7
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||+|+||++++++|++.|. +|+++.|+. +++++.. +.+ ... .++.++.+|+
T Consensus 27 l~~k~vlVTGas~gIG~aia~~L~~~G~---~V~~~~r~~------~~~~~~~-----~~l-----~~~-~~~~~~~~Dv 86 (276)
T 2b4q_A 27 LAGRIALVTGGSRGIGQMIAQGLLEAGA---RVFICARDA------EACADTA-----TRL-----SAY-GDCQAIPADL 86 (276)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEECSCH------HHHHHHH-----HHH-----TTS-SCEEECCCCT
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHH-----HHH-----Hhc-CceEEEEeeC
Confidence 5789999999999999999999999986 788888864 2222211 111 111 2688899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCC----
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNL---- 166 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l---- 166 (543)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... .+.
T Consensus 87 ~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~ 160 (276)
T 2b4q_A 87 SSEA------GARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENP 160 (276)
T ss_dssp TSHH------HHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSC
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCC
Confidence 9875 6666554 69999999996532 2456778999999998888876431 133
Q ss_pred ceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCc-hHHHHHHHHHHHHHHHhh----
Q psy7538 167 KCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPN-SYAYTKCLAEGLVAECME---- 241 (543)
Q Consensus 167 ~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn-~Y~~tK~~aE~~v~~~~~---- 241 (543)
.++|++||..+..... ... .|+.||+..|.+.+..+.
T Consensus 161 g~iV~isS~~~~~~~~--------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~ 202 (276)
T 2b4q_A 161 ARVINIGSVAGISAMG--------------------------------------EQAYAYGPSKAALHQLSRMLAKELVG 202 (276)
T ss_dssp EEEEEECCGGGTCCCC--------------------------------------CSCTTHHHHHHHHHHHHHHHHHHHGG
T ss_pred CEEEEECCHHHcCCCC--------------------------------------CCccccHHHHHHHHHHHHHHHHHhcc
Confidence 7999999986643211 014 899999999999887654
Q ss_pred cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCC
Q psy7538 242 LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESE 321 (543)
Q Consensus 242 ~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~ 321 (543)
.++++.+++|+.|..+.... + ........... .......+...+|+|++++.++..... ..
T Consensus 203 ~gI~vn~v~PG~v~T~~~~~---~------~~~~~~~~~~~-------~~~p~~r~~~p~dvA~~v~~l~s~~~~---~~ 263 (276)
T 2b4q_A 203 EHINVNVIAPGRFPSRMTRH---I------ANDPQALEADS-------ASIPMGRWGRPEEMAALAISLAGTAGA---YM 263 (276)
T ss_dssp GTEEEEEEEECCCCSTTTHH---H------HHCHHHHHHHH-------HTSTTSSCCCHHHHHHHHHHHHSGGGT---TC
T ss_pred cCeEEEEEEeccCcCcchhh---c------chhHHHHHHhh-------cCCCCCCcCCHHHHHHHHHHHhCcccc---CC
Confidence 58999999999886543210 0 00000111110 011123478999999999988865432 13
Q ss_pred CCcEEEeecC
Q psy7538 322 RKSVCNLTSN 331 (543)
Q Consensus 322 ~~~vyni~s~ 331 (543)
.++++++.++
T Consensus 264 tG~~i~vdGG 273 (276)
T 2b4q_A 264 TGNVIPIDGG 273 (276)
T ss_dssp CSCEEEESTT
T ss_pred CCCEEEeCCC
Confidence 5789998776
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.76 E-value=8.7e-18 Score=166.01 Aligned_cols=223 Identities=10% Similarity=0.097 Sum_probs=152.3
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
.+++|+++||||+|+||++++++|++.|. +|++..|... +++++.. +.+ .....++.++.+|
T Consensus 22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~---~v~~~~~~~~-----~~~~~~~-----~~~-----~~~~~~~~~~~~D 83 (269)
T 3gk3_A 22 MQAKRVAFVTGGMGGLGAAISRRLHDAGM---AVAVSHSERN-----DHVSTWL-----MHE-----RDAGRDFKAYAVD 83 (269)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHTTTC---EEEEEECSCH-----HHHHHHH-----HHH-----HTTTCCCEEEECC
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEcCCch-----HHHHHHH-----HHH-----HhcCCceEEEEec
Confidence 36789999999999999999999999987 7888775432 2222111 011 1223578999999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceE
Q psy7538 107 ITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCF 169 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~ 169 (543)
+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+..++
T Consensus 84 l~~~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i 157 (269)
T 3gk3_A 84 VADFE------SCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRI 157 (269)
T ss_dssp TTCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEE
Confidence 99875 5666554 79999999997532 2446678999999999999887541 245799
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+..... ....|+.||+..+.+.+..+. .+++
T Consensus 158 v~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~ 199 (269)
T 3gk3_A 158 VNIGSVNGSRGAF--------------------------------------GQANYASAKAGIHGFTKTLALETAKRGIT 199 (269)
T ss_dssp EEECCHHHHHCCT--------------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred EEeCChhhccCCC--------------------------------------CcchHHHHHHHHHHHHHHHHHHhhhcCCE
Confidence 9999985542211 016899999988888876554 5899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
+.+++|+.|..+..+..+. .. ... ..........+..++|+|++++.++..... ...|++
T Consensus 200 v~~v~PG~v~T~~~~~~~~---------~~----~~~----~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~---~itG~~ 259 (269)
T 3gk3_A 200 VNTVSPGYLATAMVEAVPQ---------DV----LEA----KILPQIPVGRLGRPDEVAALIAFLCSDDAG---FVTGAD 259 (269)
T ss_dssp EEEEEECSBCCTTTTC--------------------C----CSGGGCTTSSCBCHHHHHHHHHHHTSTTCT---TCCSCE
T ss_pred EEEEecCcccchhhhhhch---------hH----HHH----HhhhcCCcCCccCHHHHHHHHHHHhCCCcC---CeeCcE
Confidence 9999999887654322110 00 000 011122334567899999999988765432 135889
Q ss_pred EEeecC
Q psy7538 326 CNLTSN 331 (543)
Q Consensus 326 yni~s~ 331 (543)
+++.+|
T Consensus 260 i~vdgG 265 (269)
T 3gk3_A 260 LAINGG 265 (269)
T ss_dssp EEESTT
T ss_pred EEECCC
Confidence 999887
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.76 E-value=1.7e-17 Score=161.91 Aligned_cols=209 Identities=11% Similarity=0.108 Sum_probs=146.6
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||+|+||++++++|++.|+ +|+++.|+.... ..+..+.+|+
T Consensus 13 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~---------------------------~~~~~~~~D~ 62 (247)
T 1uzm_A 13 FVSRSVLVTGGNRGIGLAIAQRLAADGH---KVAVTHRGSGAP---------------------------KGLFGVEVDV 62 (247)
T ss_dssp CCCCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSSCCC---------------------------TTSEEEECCT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCChHHH---------------------------HHhcCeeccC
Confidence 5789999999999999999999999986 889999975321 1222478999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .+..++|
T Consensus 63 ~~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv 136 (247)
T 1uzm_A 63 TDSD------AVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMI 136 (247)
T ss_dssp TCHH------HHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEE
Confidence 9875 5665554 58999999997542 2456778999999999999988642 2568999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... ....|+.||+..|.+.+..+. .++++
T Consensus 137 ~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v 178 (247)
T 1uzm_A 137 FIGSVSGLWGIG--------------------------------------NQANYAASKAGVIGMARSIARELSKANVTA 178 (247)
T ss_dssp EECCCCC-------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred EECCHhhccCCC--------------------------------------CChhHHHHHHHHHHHHHHHHHHhhhcCcEE
Confidence 999985532110 016899999988888876554 58999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
.+++|+.|.++.... . . .......... .....+++++|+|++++.++..... -..++++
T Consensus 179 ~~v~PG~v~t~~~~~-------~-~-~~~~~~~~~~---------~p~~~~~~~~dvA~~~~~l~s~~~~---~~~G~~i 237 (247)
T 1uzm_A 179 NVVAPGYIDTDMTRA-------L-D-ERIQQGALQF---------IPAKRVGTPAEVAGVVSFLASEDAS---YISGAVI 237 (247)
T ss_dssp EEEEECSBCCHHHHH-------S-C-HHHHHHHGGG---------CTTCSCBCHHHHHHHHHHHHSGGGT---TCCSCEE
T ss_pred EEEEeCCCcccchhh-------c-C-HHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHcCcccc---CCcCCEE
Confidence 999999886542110 0 0 1111111111 1123478999999999988765332 1358899
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
++.++
T Consensus 238 ~vdgG 242 (247)
T 1uzm_A 238 PVDGG 242 (247)
T ss_dssp EESTT
T ss_pred EECCC
Confidence 99876
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.76 E-value=8.7e-17 Score=161.40 Aligned_cols=255 Identities=13% Similarity=0.126 Sum_probs=159.1
Q ss_pred CCCCCCCCccccchhhccCcchhhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCC------CHHHH
Q psy7538 2 KNIGGAPDLVTIPKELQALPDRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGK------TPNQR 75 (543)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~------~~~~r 75 (543)
|+++.-|.-..-|..+. .-++||+++||||+|+||++++++|++.|. +|+++.|++... ...++
T Consensus 7 ~~~~~~~~~~~~p~~m~-------~~l~gk~~lVTGas~GIG~aia~~la~~G~---~V~~~~~~~~~~~~~~~~~~~~~ 76 (299)
T 3t7c_A 7 HHMGTLEAQTQGPGSMA-------GKVEGKVAFITGAARGQGRSHAITLAREGA---DIIAIDVCKQLDGVKLPMSTPDD 76 (299)
T ss_dssp ---------------CC-------CTTTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEECCSCCTTCCSCCCCHHH
T ss_pred ccccceeccCCCCcccc-------cccCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEecccccccccccccCHHH
Confidence 55666665555554433 347899999999999999999999999997 788888874311 11233
Q ss_pred HHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC--------cc
Q psy7538 76 VEELFESPVFDALKTLRGKSILQKIQVISGDITQLKLGISEIDKKELID-------NVDIVYHVAATIRF--------DE 140 (543)
Q Consensus 76 l~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~--------~~ 140 (543)
+++.. +.+. ....++.++.+|+++++ +++.+++ .+|++||+||.... .+
T Consensus 77 ~~~~~-----~~~~-----~~~~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~ 140 (299)
T 3t7c_A 77 LAETV-----RQVE-----ALGRRIIASQVDVRDFD------AMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPK 140 (299)
T ss_dssp HHHHH-----HHHH-----HTTCCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHH
T ss_pred HHHHH-----HHHH-----hcCCceEEEECCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHH
Confidence 33321 1111 12357899999999875 6666654 69999999996532 24
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhc----cCCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhh
Q psy7538 141 PIKTAVILNTRGTRDMLELSKQM----KNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQD 216 (543)
Q Consensus 141 ~~~~~~~~Nv~gt~~ll~~a~~~----~~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~ 216 (543)
.++..+++|+.|+.++++++... ++-.++|++||..+.....
T Consensus 141 ~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~---------------------------------- 186 (299)
T 3t7c_A 141 TWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAE---------------------------------- 186 (299)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSCCT----------------------------------
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCC----------------------------------
Confidence 46778999999999999987542 2357999999986643211
Q ss_pred ccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEEEecCeeeecCCCCCCC---CCCCCCc--hHHHHHHHhcCceeEE
Q psy7538 217 ILGEFPNSYAYTKCLAEGLVAECME----LGMPCMILRPSIVVPIYKEPLPG---WTDNING--PTGLLIGAGKGVIRSM 287 (543)
Q Consensus 217 ~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~IlRps~V~G~~~~p~~g---w~d~~~g--~~~~~~~~~~g~~~~~ 287 (543)
....|+.||+..+.+.+..+. .|+.+..++|+.|..+.....+. +...... ..........
T Consensus 187 ----~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 256 (299)
T 3t7c_A 187 ----NIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQ------ 256 (299)
T ss_dssp ----TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHH------
T ss_pred ----CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhh------
Confidence 016899999999998877654 58999999999997764321100 0000000 0000000000
Q ss_pred eecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecC
Q psy7538 288 YCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSN 331 (543)
Q Consensus 288 ~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~ 331 (543)
..... ..+...+|+|++++.++..... -..|+++++.+|
T Consensus 257 -~~~~p-~r~~~pedvA~~v~fL~s~~a~---~itG~~i~vdGG 295 (299)
T 3t7c_A 257 -MHVLP-IPYVEPADISNAILFLVSDDAR---YITGVSLPVDGG 295 (299)
T ss_dssp -HSSSS-CSCBCHHHHHHHHHHHHSGGGT---TCCSCEEEESTT
T ss_pred -hcccC-cCCCCHHHHHHHHHHHhCcccc---cCcCCEEeeCCC
Confidence 00011 3577899999999988865432 135889999877
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.5e-17 Score=159.02 Aligned_cols=190 Identities=14% Similarity=0.089 Sum_probs=130.9
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
.+|+|+||||+|+||++++++|++.|+ +|+++.|+. ++++++. .+ ..++.++.+|++
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~---~V~~~~r~~------~~~~~~~---------~~-----~~~~~~~~~D~~ 60 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGY---RVGLMARDE------KRLQALA---------AE-----LEGALPLPGDVR 60 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH---------HH-----STTCEEEECCTT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHH---------HH-----hhhceEEEecCC
Confidence 367899999999999999999999987 788999863 2232221 11 126788999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHH----HhccCCceEE
Q psy7538 109 QLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELS----KQMKNLKCFT 170 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~l~~~V 170 (543)
+++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+ ++. +.+++|
T Consensus 61 ~~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~~~iv 133 (234)
T 2ehd_A 61 EEG------DWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRR-GGGTIV 133 (234)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-TCEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCcEEE
Confidence 875 5655544 78999999996542 2345678999999998666554 443 578999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... + ...|+.+|+..|.+.+.... .++++
T Consensus 134 ~isS~~~~~~~~---------~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v 175 (234)
T 2ehd_A 134 NVGSLAGKNPFK---------G-----------------------------GAAYNASKFGLLGLAGAAMLDLREANVRV 175 (234)
T ss_dssp EECCTTTTSCCT---------T-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred EECCchhcCCCC---------C-----------------------------CchhhHHHHHHHHHHHHHHHHHhhcCcEE
Confidence 999986543211 0 16899999988888766543 58999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhc
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFL 315 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~ 315 (543)
.++||+.|..+.... . .. . ...+..+|+|++++.++....
T Consensus 176 ~~v~Pg~v~t~~~~~-----------------~-~~---~--------~~~~~~~dvA~~~~~l~~~~~ 215 (234)
T 2ehd_A 176 VNVLPGSVDTGFAGN-----------------T-PG---Q--------AWKLKPEDVAQAVLFALEMPG 215 (234)
T ss_dssp EEEECC---------------------------------------------CCHHHHHHHHHHHHHSCC
T ss_pred EEEEeCCCcCCcccc-----------------c-cc---c--------cCCCCHHHHHHHHHHHhCCCc
Confidence 999999875542110 0 00 0 014789999999998886643
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=2.8e-17 Score=161.11 Aligned_cols=227 Identities=10% Similarity=0.062 Sum_probs=150.1
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+|+++||||+|+||++++++|++.|+ +|+++.|+. ++++++. +.+.. ...++.++.+|+++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~------~~~~~~~-----~~~~~-----~~~~~~~~~~D~~~ 62 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGF---AVAIADYND------ATAKAVA-----SEINQ-----AGGHAVAVKVDVSD 62 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH-----HHHHH-----TTCCEEEEECCTTS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHH-----HHHHh-----cCCcEEEEEecCCC
Confidence 68999999999999999999999986 788998864 2222211 11111 12468899999998
Q ss_pred CCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cC-CceEEE
Q psy7538 110 LKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KN-LKCFTY 171 (543)
Q Consensus 110 ~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~-l~~~V~ 171 (543)
++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .+ ..++|+
T Consensus 63 ~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~ 136 (256)
T 1geg_A 63 RD------QVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIIN 136 (256)
T ss_dssp HH------HHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEE
T ss_pred HH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 75 6766665 79999999996532 2345678999999999888877542 13 579999
Q ss_pred EecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEE
Q psy7538 172 ISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCM 247 (543)
Q Consensus 172 vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~ 247 (543)
+||..+..... . ...|+.||+..|.+.+..+. .++++.
T Consensus 137 isS~~~~~~~~----------~----------------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~ 178 (256)
T 1geg_A 137 ACSQAGHVGNP----------E----------------------------LAVYSSSKFAVRGLTQTAARDLAPLGITVN 178 (256)
T ss_dssp ECCGGGTSCCT----------T----------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred ECchhhcCCCC----------C----------------------------chhHHHHHHHHHHHHHHHHHHHHHcCeEEE
Confidence 99986543210 0 15899999999998877654 589999
Q ss_pred EEecCeeeecCCCCCCC-CCCCC-CchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 248 ILRPSIVVPIYKEPLPG-WTDNI-NGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 248 IlRps~V~G~~~~p~~g-w~d~~-~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
+++|+.|.++....... +.... ............ ......+...+|+|++++.++..... -..+++
T Consensus 179 ~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~p~~r~~~p~dvA~~v~~l~s~~~~---~~tG~~ 246 (256)
T 1geg_A 179 GYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAK---------RITLGRLSEPEDVAACVSYLASPDSD---YMTGQS 246 (256)
T ss_dssp EEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHT---------TCTTCSCBCHHHHHHHHHHHHSGGGT---TCCSCE
T ss_pred EEEECCCccchhhhhhhhccccccCChHHHHHHHHh---------cCCCCCCcCHHHHHHHHHHHhCcccc---CCCCCE
Confidence 99999886652110000 00000 000000011111 11123478999999999888765432 135789
Q ss_pred EEeecC
Q psy7538 326 CNLTSN 331 (543)
Q Consensus 326 yni~s~ 331 (543)
+++.++
T Consensus 247 i~vdGG 252 (256)
T 1geg_A 247 LLIDGG 252 (256)
T ss_dssp EEESSS
T ss_pred EEeCCC
Confidence 988876
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=3.7e-17 Score=161.26 Aligned_cols=222 Identities=12% Similarity=0.059 Sum_probs=151.9
Q ss_pred hhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 26 KTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 26 ~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
.-+.+|+|+||||+|+||++++++|++.|. +|+++.+... ++.++. .+.+.. ...++.++.+
T Consensus 22 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~---~v~i~~~r~~-----~~~~~~-----~~~l~~-----~~~~~~~~~~ 83 (267)
T 4iiu_A 22 SNAMSRSVLVTGASKGIGRAIARQLAADGF---NIGVHYHRDA-----AGAQET-----LNAIVA-----NGGNGRLLSF 83 (267)
T ss_dssp ---CCCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSCH-----HHHHHH-----HHHHHH-----TTCCEEEEEC
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCch-----HHHHHH-----HHHHHh-----cCCceEEEEe
Confidence 345789999999999999999999999997 6766665431 222221 111111 2357899999
Q ss_pred cCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHh----ccCCc
Q psy7538 106 DITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQ----MKNLK 167 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~----~~~l~ 167 (543)
|+++++ +++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+.. ..+..
T Consensus 84 Dl~~~~------~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g 157 (267)
T 4iiu_A 84 DVANRE------QCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGG 157 (267)
T ss_dssp CTTCHH------HHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCE
T ss_pred cCCCHH------HHHHHHHHHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCc
Confidence 999875 6666654 79999999997642 245667899999999999998741 12567
Q ss_pred eEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cC
Q psy7538 168 CFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LG 243 (543)
Q Consensus 168 ~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~ 243 (543)
++|++||..+..... ....|+.||+..+.+.+..+. .+
T Consensus 158 ~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~g 199 (267)
T 4iiu_A 158 RIITLSSVSGVMGNR--------------------------------------GQVNYSAAKAGIIGATKALAIELAKRK 199 (267)
T ss_dssp EEEEECCHHHHHCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred EEEEEcchHhccCCC--------------------------------------CCchhHHHHHHHHHHHHHHHHHHhhcC
Confidence 999999985542211 016899999977777765544 58
Q ss_pred CcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCC
Q psy7538 244 MPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERK 323 (543)
Q Consensus 244 lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~ 323 (543)
+++.+++|+.|.++..+.. ........... ....+..++|+|++++.++..... ...|
T Consensus 200 i~v~~v~PG~v~t~~~~~~----------~~~~~~~~~~~---------p~~~~~~~edva~~~~~L~s~~~~---~itG 257 (267)
T 4iiu_A 200 ITVNCIAPGLIDTGMIEME----------ESALKEAMSMI---------PMKRMGQAEEVAGLASYLMSDIAG---YVTR 257 (267)
T ss_dssp EEEEEEEECSBCSTTCCCC----------HHHHHHHHHTC---------TTCSCBCHHHHHHHHHHHHSGGGT---TCCS
T ss_pred eEEEEEEEeeecCCccccc----------HHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCCccc---CccC
Confidence 9999999999977643211 12222222221 223467899999999988765432 1358
Q ss_pred cEEEeecC
Q psy7538 324 SVCNLTSN 331 (543)
Q Consensus 324 ~vyni~s~ 331 (543)
+++++.+|
T Consensus 258 ~~i~vdGG 265 (267)
T 4iiu_A 258 QVISINGG 265 (267)
T ss_dssp CEEEESTT
T ss_pred CEEEeCCC
Confidence 89998876
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.75 E-value=5.8e-17 Score=161.09 Aligned_cols=224 Identities=16% Similarity=0.103 Sum_probs=157.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||+|+||++++++|++.|. +|+++.|+. ++++++. +.+ .....++.++.+|+
T Consensus 6 l~gk~vlVTGas~GIG~aia~~la~~G~---~V~~~~r~~------~~~~~~~-----~~~-----~~~~~~~~~~~~Dv 66 (280)
T 3tox_A 6 LEGKIAIVTGASSGIGRAAALLFAREGA---KVVVTARNG------NALAELT-----DEI-----AGGGGEAAALAGDV 66 (280)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEECCSCH------HHHHHHH-----HHH-----TTTTCCEEECCCCT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHH-----HHH-----HhcCCcEEEEECCC
Confidence 5789999999999999999999999987 788888864 2232221 111 22235788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC--------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF--------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~ 169 (543)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .+-.++
T Consensus 67 ~~~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~i 140 (280)
T 3tox_A 67 GDEA------LHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSL 140 (280)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEE
Confidence 9875 6666654 79999999996521 2446778999999999999987542 244699
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+.... .| ....|+.||+..+.+.+..+. .|+.
T Consensus 141 v~isS~~~~~~~---------~~----------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gIr 183 (280)
T 3tox_A 141 TFTSSFVGHTAG---------FA----------------------------GVAPYAASKAGLIGLVQALAVELGARGIR 183 (280)
T ss_dssp EEECCSBTTTBC---------CT----------------------------TCHHHHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred EEEcChhhCcCC---------CC----------------------------CchhHHHHHHHHHHHHHHHHHHhhhcCeE
Confidence 999998654110 00 016899999999999887655 5899
Q ss_pred EEEEecCeeeecCCCC-CCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCc
Q psy7538 246 CMILRPSIVVPIYKEP-LPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKS 324 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p-~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~ 324 (543)
+.+++|+.|.++.... .++ ..+ ......... .....+..++|+|++++.++..... -..|+
T Consensus 184 vn~v~PG~v~T~~~~~~~~~-----~~~-~~~~~~~~~---------~p~~r~~~pedvA~~v~~L~s~~a~---~itG~ 245 (280)
T 3tox_A 184 VNALLPGGTDTPANFANLPG-----AAP-ETRGFVEGL---------HALKRIARPEEIAEAALYLASDGAS---FVTGA 245 (280)
T ss_dssp EEEEEECSBSSTTSGGGSTT-----CCT-HHHHHHHTT---------STTSSCBCHHHHHHHHHHHHSGGGT---TCCSC
T ss_pred EEEEEECCCCCchhhhhccc-----cCH-HHHHHHhcc---------CccCCCcCHHHHHHHHHHHhCcccc---CCcCc
Confidence 9999999998764322 111 011 111222211 1233578899999999988866432 13588
Q ss_pred EEEeecC
Q psy7538 325 VCNLTSN 331 (543)
Q Consensus 325 vyni~s~ 331 (543)
++++.+|
T Consensus 246 ~i~vdGG 252 (280)
T 3tox_A 246 ALLADGG 252 (280)
T ss_dssp EEEESTT
T ss_pred EEEECCC
Confidence 9999887
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=2.7e-17 Score=162.60 Aligned_cols=228 Identities=15% Similarity=0.118 Sum_probs=153.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|+||++++++|++.|+ +|+++.|+. ++++++. .+ ..++.++.+|+
T Consensus 7 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~------~~~~~~~---------~~-----~~~~~~~~~Dv 63 (270)
T 1yde_A 7 YAGKVVVVTGGGRGIGAGIVRAFVNSGA---RVVICDKDE------SGGRALE---------QE-----LPGAVFILCDV 63 (270)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH---------HH-----CTTEEEEECCT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHH---------HH-----hcCCeEEEcCC
Confidence 5789999999999999999999999986 788888864 2222211 11 12478899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC--------cccHHHHHHHHHHHHHHHHHHHHhc--cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF--------DEPIKTAVILNTRGTRDMLELSKQM--KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~l~~~V 170 (543)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... ++..++|
T Consensus 64 ~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv 137 (270)
T 1yde_A 64 TQED------DVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVI 137 (270)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEE
Confidence 9875 6666654 68999999997532 1335678999999999999988642 1247999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... ....|+.||+..|.+.+..+. +|+++
T Consensus 138 ~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v 179 (270)
T 1yde_A 138 NISSLVGAIGQA--------------------------------------QAVPYVATKGAVTAMTKALALDESPYGVRV 179 (270)
T ss_dssp EECCHHHHHCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEE
T ss_pred EEcCccccCCCC--------------------------------------CCcccHHHHHHHHHHHHHHHHHhhhhCcEE
Confidence 999985432110 015899999999999887653 58999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
.++||+.|+++..+.... ....+...+...... .....+...+|+|++++.++..... ..|+++
T Consensus 180 n~v~Pg~v~t~~~~~~~~---~~~~~~~~~~~~~~~---------~p~~r~~~p~dva~~v~~L~s~~~~----itG~~i 243 (270)
T 1yde_A 180 NCISPGNIWTPLWEELAA---LMPDPRASIREGMLA---------QPLGRMGQPAEVGAAAVFLASEANF----CTGIEL 243 (270)
T ss_dssp EEEEECSBCCHHHHHHHT---TSSSHHHHHHHHHHT---------STTSSCBCHHHHHHHHHHHHHHCTT----CCSCEE
T ss_pred EEEEeCccccchhhhhhh---cccchHHHHHHHhhc---------CCCCCCcCHHHHHHHHHHHcccCCC----cCCCEE
Confidence 999999998763211000 000111111111110 1112357889999998887765221 358899
Q ss_pred EeecCCCCcccHHH
Q psy7538 327 NLTSNKDYKITWQE 340 (543)
Q Consensus 327 ni~s~~~~~~t~~e 340 (543)
++.++ ..+.++.
T Consensus 244 ~vdGG--~~~~~~~ 255 (270)
T 1yde_A 244 LVTGG--AELGYGC 255 (270)
T ss_dssp EESTT--TTSCC--
T ss_pred EECCC--eecccCc
Confidence 99887 4444443
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=4.3e-17 Score=160.57 Aligned_cols=216 Identities=11% Similarity=0.096 Sum_probs=153.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||||+||++++++|++.|+ +|+++.|+. +++++..+ ....++.++.+|+
T Consensus 4 l~~k~vlITGas~gIG~aia~~l~~~G~---~V~~~~r~~------~~~~~~~~-------------~~~~~~~~~~~D~ 61 (263)
T 2a4k_A 4 LSGKTILVTGAASGIGRAALDLFAREGA---SLVAVDREE------RLLAEAVA-------------ALEAEAIAVVADV 61 (263)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHHH-------------TCCSSEEEEECCT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHHH-------------HhcCceEEEEcCC
Confidence 5789999999999999999999999987 788998863 33332211 1124688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc-cCCceEEEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM-KNLKCFTYI 172 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~v 172 (543)
++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++++++... ++..++|++
T Consensus 62 ~~~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 135 (263)
T 2a4k_A 62 SDPK------AVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLT 135 (263)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 9875 6666554 57999999997542 2345678999999999999998764 124699999
Q ss_pred ecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEE
Q psy7538 173 STAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMI 248 (543)
Q Consensus 173 ST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~I 248 (543)
||..+. ... . ...|+.||+..+.+.+..+. .|+++.+
T Consensus 136 sS~~~~-~~~--------------------------------~------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~ 176 (263)
T 2a4k_A 136 GSVAGL-GAF--------------------------------G------LAHYAAGKLGVVGLARTLALELARKGVRVNV 176 (263)
T ss_dssp CCCTTC-CHH--------------------------------H------HHHHHHCSSHHHHHHHHHHHHHTTTTCEEEE
T ss_pred ecchhc-CCC--------------------------------C------cHHHHHHHHHHHHHHHHHHHHhhhhCcEEEE
Confidence 998664 100 0 06899999988887776543 5899999
Q ss_pred EecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEe
Q psy7538 249 LRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNL 328 (543)
Q Consensus 249 lRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni 328 (543)
+||+.|.++.... . .+ .......... ....+.+.+|+|++++.++..... -..++++++
T Consensus 177 v~PG~v~t~~~~~-------~-~~-~~~~~~~~~~---------p~~~~~~p~dvA~~v~~l~s~~~~---~~tG~~i~v 235 (263)
T 2a4k_A 177 LLPGLIQTPMTAG-------L-PP-WAWEQEVGAS---------PLGRAGRPEEVAQAALFLLSEESA---YITGQALYV 235 (263)
T ss_dssp EEECSBCCGGGTT-------S-CH-HHHHHHHHTS---------TTCSCBCHHHHHHHHHHHHSGGGT---TCCSCEEEE
T ss_pred EEeCcCcCchhhh-------c-CH-HHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCcccc---CCcCCEEEE
Confidence 9999998764321 1 11 1222222111 112467899999999988765432 135789998
Q ss_pred ecC
Q psy7538 329 TSN 331 (543)
Q Consensus 329 ~s~ 331 (543)
.++
T Consensus 236 dgG 238 (263)
T 2a4k_A 236 DGG 238 (263)
T ss_dssp STT
T ss_pred CCC
Confidence 877
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=2e-17 Score=164.26 Aligned_cols=211 Identities=18% Similarity=0.191 Sum_probs=141.9
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
-+++|+|+||||+|+||++++++|++.|+ +|+++.|+. ++++++ .+.++.. ....++.++.+|
T Consensus 29 ~l~~k~vlVTGasggIG~~la~~l~~~G~---~V~~~~r~~------~~~~~~-----~~~~~~~---~~~~~~~~~~~D 91 (279)
T 1xg5_A 29 RWRDRLALVTGASGGIGAAVARALVQQGL---KVVGCARTV------GNIEEL-----AAECKSA---GYPGTLIPYRCD 91 (279)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHH-----HHHHHHT---TCSSEEEEEECC
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEECCh------HHHHHH-----HHHHHhc---CCCceEEEEEec
Confidence 36899999999999999999999999986 789999864 222221 1112211 112468899999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHH----HHHHHHHHHhccCC--
Q psy7538 107 ITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRG----TRDMLELSKQMKNL-- 166 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~g----t~~ll~~a~~~~~l-- 166 (543)
+++++ +++.+++ ++|+|||+||.... .+.++..+++|+.| ++.+++.+++. +.
T Consensus 92 l~~~~------~v~~~~~~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~-~~~~ 164 (279)
T 1xg5_A 92 LSNEE------DILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKER-NVDD 164 (279)
T ss_dssp TTCHH------HHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCCS
T ss_pred CCCHH------HHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCC
Confidence 99875 6666654 79999999996532 24466789999999 77777777775 54
Q ss_pred ceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-----
Q psy7538 167 KCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----- 241 (543)
Q Consensus 167 ~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----- 241 (543)
.++|++||..+.... |..+ ...|+.+|+..|.+.+..+.
T Consensus 165 g~iv~isS~~~~~~~----------~~~~--------------------------~~~Y~~sK~a~~~~~~~la~e~~~~ 208 (279)
T 1xg5_A 165 GHIININSMSGHRVL----------PLSV--------------------------THFYSATKYAVTALTEGLRQELREA 208 (279)
T ss_dssp CEEEEECCGGGTSCC----------SCGG--------------------------GHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ceEEEEcChhhcccC----------CCCC--------------------------CchhHHHHHHHHHHHHHHHHHHhhc
Confidence 799999998664321 0000 06899999999888765432
Q ss_pred -cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhc
Q psy7538 242 -LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFL 315 (543)
Q Consensus 242 -~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~ 315 (543)
.++++.+++|+.|.++..... .. ..+.. .... .....+++++|+|++++.++..+.
T Consensus 209 ~~~i~v~~v~Pg~v~t~~~~~~---~~--~~~~~-~~~~------------~~~~~~~~~~dvA~~i~~l~~~~~ 265 (279)
T 1xg5_A 209 QTHIRATCISPGVVETQFAFKL---HD--KDPEK-AAAT------------YEQMKCLKPEDVAEAVIYVLSTPA 265 (279)
T ss_dssp TCCCEEEEEEESCBCSSHHHHH---TT--TCHHH-HHHH------------HC---CBCHHHHHHHHHHHHHSCT
T ss_pred CCCeEEEEEecCcccchhhhhh---cc--cChhH-Hhhh------------cccccCCCHHHHHHHHHHHhcCCc
Confidence 379999999998865421000 00 00100 0000 011246889999999998886543
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=4.7e-17 Score=161.27 Aligned_cols=221 Identities=11% Similarity=0.038 Sum_probs=153.5
Q ss_pred cCCCEEEEEcCc--chhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 28 YENKSIFLSGGS--GFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 28 ~~~~~VlITGat--GFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
++||+|+||||+ |+||++++++|++.|+ +|+++.|+.. .++.++++ ..+. .++.++.+
T Consensus 4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~---~V~~~~r~~~---~~~~~~~l---------~~~~-----~~~~~~~~ 63 (275)
T 2pd4_A 4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGA---TLAFTYLNES---LEKRVRPI---------AQEL-----NSPYVYEL 63 (275)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTC---EEEEEESSTT---THHHHHHH---------HHHT-----TCCCEEEC
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCCC---EEEEEeCCHH---HHHHHHHH---------HHhc-----CCcEEEEc
Confidence 578999999999 9999999999999986 7899999863 23333332 1111 23678899
Q ss_pred cCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-----------cccHHHHHHHHHHHHHHHHHHHHhc-cCC
Q psy7538 106 DITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-----------DEPIKTAVILNTRGTRDMLELSKQM-KNL 166 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-----------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l 166 (543)
|+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... ..-
T Consensus 64 D~~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 137 (275)
T 2pd4_A 64 DVSKEE------HFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNG 137 (275)
T ss_dssp CTTCHH------HHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE
T ss_pred CCCCHH------HHHHHHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccC
Confidence 999875 5666554 68999999997532 2345678999999999999999764 112
Q ss_pred ceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----c
Q psy7538 167 KCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----L 242 (543)
Q Consensus 167 ~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~ 242 (543)
.++|++||..+.... | ....|+.||+..+.+.+..+. .
T Consensus 138 g~iv~isS~~~~~~~----------~----------------------------~~~~Y~asK~a~~~~~~~la~e~~~~ 179 (275)
T 2pd4_A 138 ASVLTLSYLGSTKYM----------A----------------------------HYNVMGLAKAALESAVRYLAVDLGKH 179 (275)
T ss_dssp EEEEEEECGGGTSBC----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEEEecchhcCCC----------C----------------------------CchhhHHHHHHHHHHHHHHHHHhhhc
Confidence 599999997553211 0 015799999999999887654 4
Q ss_pred CCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCC
Q psy7538 243 GMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322 (543)
Q Consensus 243 ~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~ 322 (543)
|+.+.+++|+.|.++..... .........+.... ....+.+.+|+|++++.++..... ...
T Consensus 180 gi~v~~v~PG~v~T~~~~~~-------~~~~~~~~~~~~~~---------p~~~~~~p~dva~~~~~l~s~~~~---~~t 240 (275)
T 2pd4_A 180 HIRVNALSAGPIRTLASSGI-------ADFRMILKWNEINA---------PLRKNVSLEEVGNAGMYLLSSLSS---GVS 240 (275)
T ss_dssp TCEEEEEEECCCCCTTGGGS-------TTHHHHHHHHHHHS---------TTSSCCCHHHHHHHHHHHHSGGGT---TCC
T ss_pred CeEEEEEeeCccccchhhhc-------cccHHHHHHHHhcC---------CcCCCCCHHHHHHHHHHHhCcccc---CCC
Confidence 89999999999977643211 11112222221111 112356889999999988865332 135
Q ss_pred CcEEEeecC
Q psy7538 323 KSVCNLTSN 331 (543)
Q Consensus 323 ~~vyni~s~ 331 (543)
++++++.++
T Consensus 241 G~~~~vdgg 249 (275)
T 2pd4_A 241 GEVHFVDAG 249 (275)
T ss_dssp SCEEEESTT
T ss_pred CCEEEECCC
Confidence 788888776
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.75 E-value=4e-17 Score=165.26 Aligned_cols=238 Identities=11% Similarity=0.085 Sum_probs=158.1
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCC------CHHHHHHHHhcCchhHHHHhhcCcCCCCce
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGK------TPNQRVEELFESPVFDALKTLRGKSILQKI 100 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~------~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v 100 (543)
-++||+++||||+|+||++++++|++.|. +|+++.|..... ...+++++.. +.+. ....++
T Consensus 43 ~l~gk~~lVTGas~GIG~aia~~la~~G~---~Vv~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-----~~~~~~ 109 (317)
T 3oec_A 43 RLQGKVAFITGAARGQGRTHAVRLAQDGA---DIVAIDLCRQQPNLDYAQGSPEELKETV-----RLVE-----EQGRRI 109 (317)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEECCCCCTTCCSCCCCHHHHHHHH-----HHHH-----HTTCCE
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCC---eEEEEecccccccccccccCHHHHHHHH-----HHHH-----hcCCeE
Confidence 46899999999999999999999999997 788888764321 1133443321 1111 123578
Q ss_pred EEEEccCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---
Q psy7538 101 QVISGDITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM--- 163 (543)
Q Consensus 101 ~~i~gDl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 163 (543)
.++.+|+++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 110 ~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~ 183 (317)
T 3oec_A 110 IARQADVRDLA------SLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIE 183 (317)
T ss_dssp EEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 99999999875 6666654 68999999997542 2456778999999999999988542
Q ss_pred -cCCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-
Q psy7538 164 -KNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME- 241 (543)
Q Consensus 164 -~~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~- 241 (543)
+.-.++|++||..+...... ...|+.||+..+.+.+..+.
T Consensus 184 ~~~~g~Iv~isS~~~~~~~~~--------------------------------------~~~Y~asKaa~~~l~~~la~e 225 (317)
T 3oec_A 184 RGQGGSVIFVSSTVGLRGAPG--------------------------------------QSHYAASKHGVQGLMLSLANE 225 (317)
T ss_dssp TCSCEEEEEECCGGGSSCCTT--------------------------------------BHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECcHHhcCCCCC--------------------------------------CcchHHHHHHHHHHHHHHHHH
Confidence 12467999999866432110 16899999999998887655
Q ss_pred ---cCCcEEEEecCeeeecCCCCC---CCCCCCCCch-HHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhh
Q psy7538 242 ---LGMPCMILRPSIVVPIYKEPL---PGWTDNINGP-TGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDF 314 (543)
Q Consensus 242 ---~~lp~~IlRps~V~G~~~~p~---~gw~d~~~g~-~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~ 314 (543)
.|+.+..++|+.|.++..... ..+......+ ..-....... .......+++++|+|++++.++...
T Consensus 226 ~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~p~~~~~pedvA~av~fL~s~~ 298 (317)
T 3oec_A 226 VGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQ-------LTLLPIPWVEPEDVSNAVAWLASDE 298 (317)
T ss_dssp HGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHTT-------TCSSSSSSBCHHHHHHHHHHHTSGG
T ss_pred HhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHHhh-------hccCCCCCCCHHHHHHHHHHHcCCc
Confidence 589999999999877532100 0000000000 0000000000 0111257889999999998887654
Q ss_pred cccCCCCCCcEEEeecC
Q psy7538 315 LNSKESERKSVCNLTSN 331 (543)
Q Consensus 315 ~~~~~~~~~~vyni~s~ 331 (543)
.. -..|+++++.+|
T Consensus 299 a~---~itG~~i~vdGG 312 (317)
T 3oec_A 299 AR---YIHGAAIPVDGG 312 (317)
T ss_dssp GT---TCCSCEEEESTT
T ss_pred cc---CCCCCEEEECcc
Confidence 32 135889999877
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.6e-16 Score=157.21 Aligned_cols=221 Identities=12% Similarity=0.090 Sum_probs=154.0
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||+|+||++++++|++.|. +|.++.|.. .++++++. +.++ ....++.++.+|+
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~---~V~~~~~~~-----~~~~~~~~-----~~l~-----~~~~~~~~~~~Dv 90 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAIAKRLALEGA---AVALTYVNA-----AERAQAVV-----SEIE-----QAGGRAVAIRADN 90 (271)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSC-----HHHHHHHH-----HHHH-----HTTCCEEEEECCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCC-----HHHHHHHH-----HHHH-----hcCCcEEEEECCC
Confidence 6789999999999999999999999987 787776654 22232221 1111 1235788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc-cCCceEEEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM-KNLKCFTYI 172 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~v 172 (543)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... ++-.++|++
T Consensus 91 ~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~i 164 (271)
T 3v2g_A 91 RDAE------AIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITI 164 (271)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 9875 6666655 79999999997542 2446778999999999999998763 345699999
Q ss_pred ecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEE
Q psy7538 173 STAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMI 248 (543)
Q Consensus 173 ST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~I 248 (543)
||..+.... .| ....|+.||+..+.+.+..+. .|+++..
T Consensus 165 sS~~~~~~~---------~~----------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~ 207 (271)
T 3v2g_A 165 GSNLAELVP---------WP----------------------------GISLYSASKAALAGLTKGLARDLGPRGITVNI 207 (271)
T ss_dssp CCGGGTCCC---------ST----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEE
T ss_pred eChhhccCC---------CC----------------------------CchHHHHHHHHHHHHHHHHHHHhhhhCeEEEE
Confidence 996442210 00 016899999999998877654 5899999
Q ss_pred EecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEe
Q psy7538 249 LRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNL 328 (543)
Q Consensus 249 lRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni 328 (543)
++|+.|.++.....+. ......... ....+...+|+|++++.++..... -..|+++++
T Consensus 208 v~PG~v~T~~~~~~~~----------~~~~~~~~~---------~~~r~~~pedvA~~v~fL~s~~~~---~itG~~i~v 265 (271)
T 3v2g_A 208 VHPGSTDTDMNPADGD----------HAEAQRERI---------ATGSYGEPQDIAGLVAWLAGPQGK---FVTGASLTI 265 (271)
T ss_dssp EEECSBCSSSSCSSCS----------SHHHHHHTC---------TTSSCBCHHHHHHHHHHHHSGGGT---TCCSCEEEE
T ss_pred EecCCCcCCcccccch----------hHHHHHhcC---------CCCCCCCHHHHHHHHHHHhCcccC---CccCCEEEe
Confidence 9999998765432110 011111111 122356789999999888755432 135889999
Q ss_pred ecC
Q psy7538 329 TSN 331 (543)
Q Consensus 329 ~s~ 331 (543)
.+|
T Consensus 266 dGG 268 (271)
T 3v2g_A 266 DGG 268 (271)
T ss_dssp STT
T ss_pred CcC
Confidence 876
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.2e-17 Score=164.90 Aligned_cols=223 Identities=11% Similarity=0.080 Sum_probs=155.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+|+||||+|+||++++++|++.|. +|+++.|+. +++++.. +.+... ...++.++.+|+
T Consensus 18 l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~------~~~~~~~-----~~l~~~----~~~~~~~~~~Dv 79 (266)
T 4egf_A 18 LDGKRALITGATKGIGADIARAFAAAGA---RLVLSGRDV------SELDAAR-----RALGEQ----FGTDVHTVAIDL 79 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH-----HHHHHH----HCCCEEEEECCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHH-----HHHHHh----cCCcEEEEEecC
Confidence 5789999999999999999999999987 789999864 2222211 112111 124789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc----cCCceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM----KNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~l~~~ 169 (543)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... +.-.++
T Consensus 80 ~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~i 153 (266)
T 4egf_A 80 AEPD------APAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAI 153 (266)
T ss_dssp TSTT------HHHHHHHHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEE
Confidence 9987 5665554 79999999997642 2346678999999999999888542 124699
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+..... ....|+.||+..+.+.+..+. ++++
T Consensus 154 v~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~l~~~la~e~~~~gI~ 195 (266)
T 4egf_A 154 ITVASAAALAPLP--------------------------------------DHYAYCTSKAGLVMATKVLARELGPHGIR 195 (266)
T ss_dssp EEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred EEEcchhhccCCC--------------------------------------CChHHHHHHHHHHHHHHHHHHHHhhhCeE
Confidence 9999986643211 016899999999988877654 5899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
+..++|+.|..+..... ............. .....+..++|+|++++.++..... -..|++
T Consensus 196 vn~v~PG~v~T~~~~~~-------~~~~~~~~~~~~~---------~p~~r~~~p~dva~~v~~L~s~~~~---~itG~~ 256 (266)
T 4egf_A 196 ANSVCPTVVLTEMGQRV-------WGDEAKSAPMIAR---------IPLGRFAVPHEVSDAVVWLASDAAS---MINGVD 256 (266)
T ss_dssp EEEEEESCBCSHHHHHH-------TCSHHHHHHHHTT---------CTTSSCBCHHHHHHHHHHHHSGGGT---TCCSCE
T ss_pred EEEEEeCCCcCchhhhh-------ccChHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCchhc---CccCcE
Confidence 99999998876532110 0011112222221 1223467799999999988765432 135889
Q ss_pred EEeecC
Q psy7538 326 CNLTSN 331 (543)
Q Consensus 326 yni~s~ 331 (543)
+++.++
T Consensus 257 i~vdGG 262 (266)
T 4egf_A 257 IPVDGG 262 (266)
T ss_dssp EEESTT
T ss_pred EEECCC
Confidence 999877
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.75 E-value=3e-17 Score=160.63 Aligned_cols=207 Identities=7% Similarity=0.016 Sum_probs=136.8
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|+||++++++|++.|. +|+++.|+.... +.+.+ .++ ....++.++.+|+
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~G~---~V~~~~r~~~~~---~~~~~--------~~~-----~~~~~~~~~~~Dv 65 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAEGF---TVFAGRRNGEKL---APLVA--------EIE-----AAGGRIVARSLDA 65 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHTTC---EEEEEESSGGGG---HHHHH--------HHH-----HTTCEEEEEECCT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHHHH---HHHHH--------HHH-----hcCCeEEEEECcC
Confidence 5789999999999999999999999987 799999975321 11211 111 1235789999999
Q ss_pred CCCCCCCCHHHHHHHhc------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEEE
Q psy7538 108 TQLKLGISEIDKKELID------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFTY 171 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~ 171 (543)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .+-.++|+
T Consensus 66 ~~~~------~v~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~ 139 (252)
T 3h7a_A 66 RNED------EVTAFLNAADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFF 139 (252)
T ss_dssp TCHH------HHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCHH------HHHHHHHHHHhhCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 9875 6666665 68999999997542 2446678999999999998887431 14579999
Q ss_pred EecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE-
Q psy7538 172 ISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC- 246 (543)
Q Consensus 172 vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~- 246 (543)
+||..+..... ....|+.||+..+.+.+..+. .|+.+
T Consensus 140 isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~ 181 (252)
T 3h7a_A 140 TGATASLRGGS--------------------------------------GFAAFASAKFGLRAVAQSMARELMPKNIHVA 181 (252)
T ss_dssp EEEGGGTCCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred ECCHHHcCCCC--------------------------------------CCccHHHHHHHHHHHHHHHHHHhhhcCCEEE
Confidence 99986543211 016899999999988877654 57889
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcc
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLN 316 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~ 316 (543)
.++.|+.|..+...... ..... . ........ ++..+|+|++++.++..+..
T Consensus 182 n~v~PG~v~T~~~~~~~---------~~~~~--------~-~~~~~~~~-~~~pedvA~~~~~l~s~~~~ 232 (252)
T 3h7a_A 182 HLIIDSGVDTAWVRERR---------EQMFG--------K-DALANPDL-LMPPAAVAGAYWQLYQQPKS 232 (252)
T ss_dssp EEEEC----------------------------------------------CCHHHHHHHHHHHHHCCGG
T ss_pred EEecCCccCChhhhccc---------hhhhh--------h-hhhcCCcc-CCCHHHHHHHHHHHHhCchh
Confidence 89999988654322100 00000 0 11111223 88999999999998876543
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.75 E-value=2e-17 Score=163.26 Aligned_cols=204 Identities=17% Similarity=0.123 Sum_probs=144.5
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
-+.+|+|+||||+|+||++++++|++.|. +|+++.|+. +++++ ....++.++.+|
T Consensus 13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~------~~~~~----------------~~~~~~~~~~~D 67 (266)
T 3p19_A 13 GSMKKLVVITGASSGIGEAIARRFSEEGH---PLLLLARRV------ERLKA----------------LNLPNTLCAQVD 67 (266)
T ss_dssp --CCCEEEEESTTSHHHHHHHHHHHHTTC---CEEEEESCH------HHHHT----------------TCCTTEEEEECC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCH------HHHHH----------------hhcCCceEEEec
Confidence 35689999999999999999999999997 788888863 23322 122478899999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHH----hccCCce
Q psy7538 107 ITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSK----QMKNLKC 168 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~----~~~~l~~ 168 (543)
+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++. +. +..+
T Consensus 68 v~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~ 140 (266)
T 3p19_A 68 VTDKY------TFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKAR-NCGT 140 (266)
T ss_dssp TTCHH------HHHHHHHHHHHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCE
T ss_pred CCCHH------HHHHHHHHHHHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcE
Confidence 99875 6666655 78999999997532 24466789999999999877764 33 5679
Q ss_pred EEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCC
Q psy7538 169 FTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGM 244 (543)
Q Consensus 169 ~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~l 244 (543)
+|++||..+..... ....|+.||+..+.+.+..+. +|+
T Consensus 141 IV~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi 182 (266)
T 3p19_A 141 IINISSIAGKKTFP--------------------------------------DHAAYCGTKFAVHAISENVREEVAASNV 182 (266)
T ss_dssp EEEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTC
T ss_pred EEEEcChhhCCCCC--------------------------------------CCchHHHHHHHHHHHHHHHHHHhcccCc
Confidence 99999986643211 016899999999988876654 589
Q ss_pred cEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcc
Q psy7538 245 PCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLN 316 (543)
Q Consensus 245 p~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~ 316 (543)
++.+++|+.|.++..... .. ........... .....++.++|+|++++.++..+..
T Consensus 183 ~vn~v~PG~v~T~~~~~~-------~~-~~~~~~~~~~~--------~~~~r~~~pedvA~av~~l~~~~~~ 238 (266)
T 3p19_A 183 RVMTIAPSAVKTELLSHT-------TS-QQIKDGYDAWR--------VDMGGVLAADDVARAVLFAYQQPQN 238 (266)
T ss_dssp EEEEEEECSBSSSGGGGC-------SC-HHHHHHHHHHH--------HHTTCCBCHHHHHHHHHHHHHSCTT
T ss_pred EEEEEeeCccccchhhcc-------cc-hhhhHHHHhhc--------ccccCCCCHHHHHHHHHHHHcCCCC
Confidence 999999999976543211 11 11111111000 0123478899999999999877653
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.8e-17 Score=161.62 Aligned_cols=219 Identities=14% Similarity=0.125 Sum_probs=151.8
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
-++||+++||||+|+||++++++|++.|. +|+++.|+. +++++..+ ....++.++.+|
T Consensus 3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~---~V~~~~r~~------~~~~~~~~-------------~~~~~~~~~~~D 60 (247)
T 3rwb_A 3 RLAGKTALVTGAAQGIGKAIAARLAADGA---TVIVSDINA------EGAKAAAA-------------SIGKKARAIAAD 60 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEECSCH------HHHHHHHH-------------HHCTTEEECCCC
T ss_pred CcCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHHH-------------HhCCceEEEEcC
Confidence 36899999999999999999999999987 788888864 23322211 112468899999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHH----HhccCCce
Q psy7538 107 ITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELS----KQMKNLKC 168 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~l~~ 168 (543)
+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++.+++ ++.+...+
T Consensus 61 v~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~ 134 (247)
T 3rwb_A 61 ISDPG------SVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGR 134 (247)
T ss_dssp TTCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEE
T ss_pred CCCHH------HHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcE
Confidence 99875 6666655 79999999997643 2446678999999999998884 33323579
Q ss_pred EEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCC
Q psy7538 169 FTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGM 244 (543)
Q Consensus 169 ~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~l 244 (543)
+|++||..+..... ....|+.||+..+.+.+..+. +|+
T Consensus 135 iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi 176 (247)
T 3rwb_A 135 VISIASNTFFAGTP--------------------------------------NMAAYVAAKGGVIGFTRALATELGKYNI 176 (247)
T ss_dssp EEEECCTHHHHTCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred EEEECchhhccCCC--------------------------------------CchhhHHHHHHHHHHHHHHHHHhhhcCe
Confidence 99999985543211 016899999988888876654 589
Q ss_pred cEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCc
Q psy7538 245 PCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKS 324 (543)
Q Consensus 245 p~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~ 324 (543)
++..++|+.|..+.....+. .....+... . .....+...+|+|+++..++..... -..|+
T Consensus 177 ~vn~v~PG~v~t~~~~~~~~-----~~~~~~~~~-~-----------~~~~r~~~pedva~~v~~L~s~~~~---~itG~ 236 (247)
T 3rwb_A 177 TANAVTPGLIESDGVKASPH-----NEAFGFVEM-L-----------QAMKGKGQPEHIADVVSFLASDDAR---WITGQ 236 (247)
T ss_dssp EEEEEEECSBCCHHHHTSGG-----GGGHHHHHH-H-----------SSSCSCBCHHHHHHHHHHHHSGGGT---TCCSC
T ss_pred EEEEEeeCcCcCccccccCh-----hHHHHHHhc-c-----------cccCCCcCHHHHHHHHHHHhCcccc---CCCCC
Confidence 99999999886653221110 000011110 0 1122356789999999888765432 13588
Q ss_pred EEEeecC
Q psy7538 325 VCNLTSN 331 (543)
Q Consensus 325 vyni~s~ 331 (543)
++++.+|
T Consensus 237 ~i~vdGG 243 (247)
T 3rwb_A 237 TLNVDAG 243 (247)
T ss_dssp EEEESTT
T ss_pred EEEECCC
Confidence 9999876
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.75 E-value=3.7e-17 Score=158.53 Aligned_cols=213 Identities=15% Similarity=0.183 Sum_probs=147.3
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+|+++||||||+||++++++|++.|+ +|+++.|+... +.+. . ++.++.+|+++
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~---~V~~~~r~~~~------~~~~--------------~----~~~~~~~D~~~ 54 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGY---RVAIASRNPEE------AAQS--------------L----GAVPLPTDLEK 54 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCHH------HHHH--------------H----TCEEEECCTTT
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH------HHHh--------------h----CcEEEecCCch
Confidence 68999999999999999999999986 78999997521 1110 1 26788999998
Q ss_pred CCCCCCHHHHHHH-------hcCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEEEE
Q psy7538 110 LKLGISEIDKKEL-------IDNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFTYI 172 (543)
Q Consensus 110 ~~lgls~~~~~~l-------~~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~v 172 (543)
+ +++.+ ..++|++||+||.... .+.++..+++|+.|+.++++++... .+..++|++
T Consensus 55 -~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~i 127 (239)
T 2ekp_A 55 -D------DPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFI 127 (239)
T ss_dssp -S------CHHHHHHHHHHHHTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred -H------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEE
Confidence 4 23333 2479999999996532 2446778999999999998888431 256899999
Q ss_pred ecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEE
Q psy7538 173 STAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMI 248 (543)
Q Consensus 173 ST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~I 248 (543)
||..+..... +++ ...|+.||+..|.+.+..+. .|+++.+
T Consensus 128 sS~~~~~~~~-------~~~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~ 171 (239)
T 2ekp_A 128 GSVTTFTAGG-------PVP-----------------------------IPAYTTAKTALLGLTRALAKEWARLGIRVNL 171 (239)
T ss_dssp CCGGGTSCCT-------TSC-----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred CchhhccCCC-------CCC-----------------------------CccHHHHHHHHHHHHHHHHHHhhhcCcEEEE
Confidence 9986654321 001 16899999999998877654 4899999
Q ss_pred EecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEe
Q psy7538 249 LRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNL 328 (543)
Q Consensus 249 lRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni 328 (543)
+||+.|.++...... ..+ ......... .....+...+|+|++++.++..... -..++++++
T Consensus 172 v~Pg~v~t~~~~~~~------~~~-~~~~~~~~~---------~p~~~~~~~~dvA~~~~~l~s~~~~---~~tG~~~~v 232 (239)
T 2ekp_A 172 LCPGYVETEFTLPLR------QNP-ELYEPITAR---------IPMGRWARPEEIARVAAVLCGDEAE---YLTGQAVAV 232 (239)
T ss_dssp EEECSBCSGGGHHHH------TCH-HHHHHHHTT---------CTTSSCBCHHHHHHHHHHHTSGGGT---TCCSCEEEE
T ss_pred EEeCCccCchhhccc------cCH-HHHHHHHhc---------CCCCCCcCHHHHHHHHHHHcCchhc---CCCCCEEEE
Confidence 999998766321100 001 111111111 1123478899999999988865432 135788888
Q ss_pred ecC
Q psy7538 329 TSN 331 (543)
Q Consensus 329 ~s~ 331 (543)
.++
T Consensus 233 dgG 235 (239)
T 2ekp_A 233 DGG 235 (239)
T ss_dssp STT
T ss_pred CCC
Confidence 776
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.75 E-value=8e-17 Score=157.72 Aligned_cols=224 Identities=15% Similarity=0.155 Sum_probs=152.1
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
||+++||||+|+||++++++|++.|.+. .|++..|+. ++++++.+ + ...++.++.+|+++
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~-~v~~~~r~~------~~~~~~~~---------~----~~~~~~~~~~Dv~~ 61 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDT-VVYGVARSE------APLKKLKE---------K----YGDRFFYVVGDITE 61 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSC-EEEEEESCH------HHHHHHHH---------H----HGGGEEEEESCTTS
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCe-EEEEecCCH------HHHHHHHH---------H----hCCceEEEECCCCC
Confidence 6899999999999999999999997554 788888863 23332211 1 12468899999998
Q ss_pred CCCCCCHHHHHHHhc-------CccEEEEcCccCCC--------cccHHHHHHHHHHHHHHHHHHH----HhccCCceEE
Q psy7538 110 LKLGISEIDKKELID-------NVDIVYHVAATIRF--------DEPIKTAVILNTRGTRDMLELS----KQMKNLKCFT 170 (543)
Q Consensus 110 ~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~l~~~V 170 (543)
++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++ ++. + .++|
T Consensus 62 ~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~-g~iv 133 (254)
T 3kzv_A 62 DS------VLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKT-N-GNVV 133 (254)
T ss_dssp HH------HHHHHHHHHHHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-T-CEEE
T ss_pred HH------HHHHHHHHHHHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-C-CeEE
Confidence 75 6666654 68999999997432 2445678999999999999988 443 3 7999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh--cCCcEEE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME--LGMPCMI 248 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~--~~lp~~I 248 (543)
++||..+..... + ...|+.||+..+.+.+..+. .++.+..
T Consensus 134 ~isS~~~~~~~~---------~-----------------------------~~~Y~asK~a~~~~~~~la~e~~~i~vn~ 175 (254)
T 3kzv_A 134 FVSSDACNMYFS---------S-----------------------------WGAYGSSKAALNHFAMTLANEERQVKAIA 175 (254)
T ss_dssp EECCSCCCCSSC---------C-----------------------------SHHHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred EEcCchhccCCC---------C-----------------------------cchHHHHHHHHHHHHHHHHhhccCcEEEE
Confidence 999986643211 0 16899999999999988775 5899999
Q ss_pred EecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhc-ccCCCCCCcEEE
Q psy7538 249 LRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFL-NSKESERKSVCN 327 (543)
Q Consensus 249 lRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~-~~~~~~~~~vyn 327 (543)
++|+.|..+......................... .....+...+|+|++++.++.... . -..|++++
T Consensus 176 v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~r~~~p~dva~~v~~L~s~~~~~---~itG~~i~ 243 (254)
T 3kzv_A 176 VAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGL---------KENNQLLDSSVPATVYAKLALHGIPD---GVNGQYLS 243 (254)
T ss_dssp EECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHH---------HTTC----CHHHHHHHHHHHHHCCCG---GGTTCEEE
T ss_pred EeCCcccchhHHHhhcccCccccCHHHHHHHHHH---------HhcCCcCCcccHHHHHHHHHhhcccC---CCCccEEE
Confidence 9999998776543322111000011122221111 112346788999999998876652 1 12588888
Q ss_pred eecC
Q psy7538 328 LTSN 331 (543)
Q Consensus 328 i~s~ 331 (543)
+.++
T Consensus 244 vdg~ 247 (254)
T 3kzv_A 244 YNDP 247 (254)
T ss_dssp TTCG
T ss_pred ecCc
Confidence 8765
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=1.3e-17 Score=165.03 Aligned_cols=197 Identities=17% Similarity=0.148 Sum_probs=141.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||+|+||++++++|++.|. +|+++.|+. ++++++ .+.++. ...++.++.+|+
T Consensus 29 l~~k~vlITGasggIG~~la~~L~~~G~---~V~~~~r~~------~~~~~~-----~~~l~~-----~~~~~~~~~~Dl 89 (272)
T 1yb1_A 29 VTGEIVLITGAGHGIGRLTAYEFAKLKS---KLVLWDINK------HGLEET-----AAKCKG-----LGAKVHTFVVDC 89 (272)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHH-----HHHHHH-----TTCCEEEEECCT
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEEcCH------HHHHHH-----HHHHHh-----cCCeEEEEEeeC
Confidence 5789999999999999999999999986 789999864 222221 111211 124788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .+..++|
T Consensus 90 ~~~~------~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv 163 (272)
T 1yb1_A 90 SNRE------DIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIV 163 (272)
T ss_dssp TCHH------HHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEE
Confidence 9875 5665554 78999999997543 1345668999999988877776432 2568999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-------cC
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-------LG 243 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-------~~ 243 (543)
++||..+..... +. ..|+.||+..|.+++..+. .+
T Consensus 164 ~isS~~~~~~~~--------------------------------~~------~~Y~~sK~a~~~l~~~la~e~~~~~~~g 205 (272)
T 1yb1_A 164 TVASAAGHVSVP--------------------------------FL------LAYCSSKFAAVGFHKTLTDELAALQITG 205 (272)
T ss_dssp EECCCC-CCCHH--------------------------------HH------HHHHHHHHHHHHHHHHHHHHHHHTTCTT
T ss_pred EEechhhcCCCC--------------------------------Cc------hhHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 999986643210 00 6899999999998876554 27
Q ss_pred CcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhc
Q psy7538 244 MPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFL 315 (543)
Q Consensus 244 lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~ 315 (543)
++++++||+.|.++... . . . .....+++++|+|++++.++....
T Consensus 206 i~v~~v~Pg~v~t~~~~-------~--~---~----------------~~~~~~~~~~dva~~i~~~~~~~~ 249 (272)
T 1yb1_A 206 VKTTCLCPNFVNTGFIK-------N--P---S----------------TSLGPTLEPEEVVNRLMHGILTEQ 249 (272)
T ss_dssp EEEEEEEETHHHHCSTT-------C--T---H----------------HHHCCCCCHHHHHHHHHHHHHTTC
T ss_pred eEEEEEeCCcccCCccc-------c--c---c----------------ccccCCCCHHHHHHHHHHHHHcCC
Confidence 99999999988665311 0 0 0 012346889999999998886643
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=2.8e-17 Score=162.19 Aligned_cols=225 Identities=13% Similarity=0.102 Sum_probs=152.6
Q ss_pred hhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 26 KTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 26 ~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
.-+++|+++||||+|+||++++++|++.|+ +|+++.|+. +++++.. +.+... ...++.++.+
T Consensus 17 ~~l~~k~~lVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~------~~~~~~~-----~~l~~~----~~~~~~~~~~ 78 (267)
T 1vl8_A 17 FDLRGRVALVTGGSRGLGFGIAQGLAEAGC---SVVVASRNL------EEASEAA-----QKLTEK----YGVETMAFRC 78 (267)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH-----HHHHHH----HCCCEEEEEC
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHH-----HHHHHh----cCCeEEEEEc
Confidence 346789999999999999999999999987 788999864 2222211 111111 1236788999
Q ss_pred cCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCce
Q psy7538 106 DITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKC 168 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~ 168 (543)
|+++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... .+..+
T Consensus 79 Dl~~~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~ 152 (267)
T 1vl8_A 79 DVSNYE------EVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPS 152 (267)
T ss_dssp CTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCE
T ss_pred CCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcE
Confidence 999875 6666654 68999999997542 1345678999999999998887431 25679
Q ss_pred EEEEecCc-cccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cC
Q psy7538 169 FTYISTAY-CHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LG 243 (543)
Q Consensus 169 ~V~vST~y-~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~ 243 (543)
+|++||.. +.... | ....|+.||+..|.+.+..+. .|
T Consensus 153 iv~isS~~~~~~~~----------~----------------------------~~~~Y~asK~a~~~~~~~la~e~~~~g 194 (267)
T 1vl8_A 153 IINIGSLTVEEVTM----------P----------------------------NISAYAASKGGVASLTKALAKEWGRYG 194 (267)
T ss_dssp EEEECCGGGTCCCS----------S----------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred EEEECCcchhccCC----------C----------------------------CChhHHHHHHHHHHHHHHHHHHhcccC
Confidence 99999986 32110 0 016899999999999877654 58
Q ss_pred CcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCC
Q psy7538 244 MPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERK 323 (543)
Q Consensus 244 lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~ 323 (543)
+++.+++|+.|..+.... +. ..+ .......... ....++..+|+|++++.++..... -..|
T Consensus 195 i~v~~v~PG~v~T~~~~~---~~---~~~-~~~~~~~~~~---------p~~~~~~p~dvA~~v~~l~s~~~~---~itG 255 (267)
T 1vl8_A 195 IRVNVIAPGWYRTKMTEA---VF---SDP-EKLDYMLKRI---------PLGRTGVPEDLKGVAVFLASEEAK---YVTG 255 (267)
T ss_dssp CEEEEEEECCBCSTTTHH---HH---TCH-HHHHHHHHTC---------TTSSCBCGGGGHHHHHHHHSGGGT---TCCS
T ss_pred eEEEEEEeccCccccccc---cc---cCh-HHHHHHHhhC---------CCCCCcCHHHHHHHHHHHcCcccc---CCcC
Confidence 999999999886542210 00 001 1111111111 112467899999999988765432 1357
Q ss_pred cEEEeecC
Q psy7538 324 SVCNLTSN 331 (543)
Q Consensus 324 ~vyni~s~ 331 (543)
+++++.++
T Consensus 256 ~~i~vdGG 263 (267)
T 1vl8_A 256 QIIFVDGG 263 (267)
T ss_dssp CEEEESTT
T ss_pred CeEEECCC
Confidence 88888776
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=6.1e-18 Score=167.90 Aligned_cols=225 Identities=14% Similarity=0.125 Sum_probs=155.4
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
-++||+++||||+|+||++++++|++.|. +|+++.|+.. ++++.. +.+... ...++.++.+|
T Consensus 24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~---~V~~~~r~~~------~~~~~~-----~~~~~~----~~~~~~~~~~D 85 (277)
T 4fc7_A 24 LLRDKVAFITGGGSGIGFRIAEIFMRHGC---HTVIASRSLP------RVLTAA-----RKLAGA----TGRRCLPLSMD 85 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTC---EEEEEESCHH------HHHHHH-----HHHHHH----HSSCEEEEECC
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHH-----HHHHHh----cCCcEEEEEcC
Confidence 47899999999999999999999999986 8889988742 222111 111111 12478899999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceE
Q psy7538 107 ITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCF 169 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~ 169 (543)
+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++.+++... .+-.++
T Consensus 86 v~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~i 159 (277)
T 4fc7_A 86 VRAPP------AVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVI 159 (277)
T ss_dssp TTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEE
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEE
Confidence 99875 6666554 68999999995432 2456778999999999999988531 134699
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+..... ....|+.||+..+.+.+..+. +|++
T Consensus 160 v~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~ 201 (277)
T 4fc7_A 160 VNITATLGNRGQA--------------------------------------LQVHAGSAKAAVDAMTRHLAVEWGPQNIR 201 (277)
T ss_dssp EEECCSHHHHTCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred EEECchhhCCCCC--------------------------------------CcHHHHHHHHHHHHHHHHHHHHhhhcCeE
Confidence 9999986543211 016899999999998877654 5899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
+..++|+.|.++.... ............... .....+...+|+|++++.++..... -..|++
T Consensus 202 vn~v~PG~v~t~~~~~------~~~~~~~~~~~~~~~---------~p~~r~~~p~dvA~~v~fL~s~~~~---~itG~~ 263 (277)
T 4fc7_A 202 VNSLAPGPISGTEGLR------RLGGPQASLSTKVTA---------SPLQRLGNKTEIAHSVLYLASPLAS---YVTGAV 263 (277)
T ss_dssp EEEEEECCBSSSHHHH------HHSCCHHHHHHHHHT---------STTSSCBCHHHHHHHHHHHHSGGGT---TCCSCE
T ss_pred EEEEEECCEecchhhh------hccCCHHHHHHHhcc---------CCCCCCcCHHHHHHHHHHHcCCccC---CcCCCE
Confidence 9999999887642100 000111122222221 1223467899999999988865432 135889
Q ss_pred EEeecC
Q psy7538 326 CNLTSN 331 (543)
Q Consensus 326 yni~s~ 331 (543)
+++.+|
T Consensus 264 i~vdGG 269 (277)
T 4fc7_A 264 LVADGG 269 (277)
T ss_dssp EEESTT
T ss_pred EEECCC
Confidence 999887
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=3.3e-17 Score=162.80 Aligned_cols=227 Identities=12% Similarity=0.151 Sum_probs=153.9
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|+||++++++|++.|+ +|+++.|+. +++++.. +.+.... ....++.++.+|+
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~------~~~~~~~-----~~~~~~~--~~~~~~~~~~~Dv 67 (280)
T 1xkq_A 4 FSNKTVIITGSSNGIGRTTAILFAQEGA---NVTITGRSS------ERLEETR-----QIILKSG--VSEKQVNSVVADV 67 (280)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH-----HHHHTTT--CCGGGEEEEECCT
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHH-----HHHHHcC--CCCcceEEEEecC
Confidence 5789999999999999999999999987 789999864 2232211 1111110 0012688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-----------cccHHHHHHHHHHHHHHHHHHHHhc---cCC
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-----------DEPIKTAVILNTRGTRDMLELSKQM---KNL 166 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-----------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l 166 (543)
++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... .+
T Consensus 68 ~~~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~- 140 (280)
T 1xkq_A 68 TTED------GQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK- 140 (280)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-
Confidence 9875 5666554 68999999996532 1345678999999999999988652 13
Q ss_pred ceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----c
Q psy7538 167 KCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----L 242 (543)
Q Consensus 167 ~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~ 242 (543)
.++|++||..+..... ++ ...|+.||+..|.+.+..+. +
T Consensus 141 g~iv~isS~~~~~~~~--------~~-----------------------------~~~Y~asK~a~~~~~~~la~e~~~~ 183 (280)
T 1xkq_A 141 GEIVNVSSIVAGPQAQ--------PD-----------------------------FLYYAIAKAALDQYTRSTAIDLAKF 183 (280)
T ss_dssp CEEEEECCGGGSSSCC--------CS-----------------------------SHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CcEEEecCccccCCCC--------Cc-----------------------------ccHHHHHHHHHHHHHHHHHHHhccC
Confidence 7999999986643210 00 16899999999999887653 5
Q ss_pred CCcEEEEecCeeeecCCCCCCCCCCCCCch-----HHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhh-cc
Q psy7538 243 GMPCMILRPSIVVPIYKEPLPGWTDNINGP-----TGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDF-LN 316 (543)
Q Consensus 243 ~lp~~IlRps~V~G~~~~p~~gw~d~~~g~-----~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~-~~ 316 (543)
|+++.+++|+.|.++...... .... ......... ......+.+++|+|++++.++... ..
T Consensus 184 gi~v~~v~PG~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~---------~~p~~~~~~pedvA~~v~~l~s~~~~~ 249 (280)
T 1xkq_A 184 GIRVNSVSPGMVETGFTNAMG-----MPDQASQKFYNFMASHKE---------CIPIGAAGKPEHIANIILFLADRNLSF 249 (280)
T ss_dssp TCEEEEEEECCBCSSHHHHTT-----CCHHHHHHHHHHHHHCTT---------TCTTSSCBCHHHHHHHHHHHHCHHHHT
T ss_pred CeEEEEEeeCcCcCCcccccc-----cccccccchHHHHHHHHc---------CCCCCCCCCHHHHHHHHHHhcCccccc
Confidence 899999999999776321100 0000 001111111 112235789999999999887654 21
Q ss_pred cCCCCCCcEEEeecC
Q psy7538 317 SKESERKSVCNLTSN 331 (543)
Q Consensus 317 ~~~~~~~~vyni~s~ 331 (543)
. ..++++++.++
T Consensus 250 -~--~tG~~i~vdgG 261 (280)
T 1xkq_A 250 -Y--ILGQSIVADGG 261 (280)
T ss_dssp -T--CCSCEEEESTT
T ss_pred -C--ccCCeEEECCC
Confidence 1 25889999877
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.75 E-value=5.1e-17 Score=161.18 Aligned_cols=237 Identities=13% Similarity=0.084 Sum_probs=156.8
Q ss_pred hhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCC-------CHHHHHHHHhcCchhHHHHhhcCcCCCC
Q psy7538 26 KTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGK-------TPNQRVEELFESPVFDALKTLRGKSILQ 98 (543)
Q Consensus 26 ~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~-------~~~~rl~~~~~~~~f~~l~~~~~~~~~~ 98 (543)
.-++||+++||||+|+||++++++|++.|. +|+++.|..+.. ...+++++..+ .+. ....
T Consensus 7 ~~l~~k~~lVTGas~GIG~a~a~~la~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-----~~~-----~~~~ 73 (277)
T 3tsc_A 7 GKLEGRVAFITGAARGQGRAHAVRMAAEGA---DIIAVDIAGKLPSCVPYDPASPDDLSETVR-----LVE-----AANR 73 (277)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEECCSCCCTTCCSCCCCHHHHHHHHH-----HHH-----HTTC
T ss_pred cccCCCEEEEECCccHHHHHHHHHHHHcCC---EEEEEeccccccccccccccCHHHHHHHHH-----HHH-----hcCC
Confidence 346899999999999999999999999997 788888853211 11333333211 111 1235
Q ss_pred ceEEEEccCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc-
Q psy7538 99 KIQVISGDITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM- 163 (543)
Q Consensus 99 ~v~~i~gDl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~- 163 (543)
++.++.+|+++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 74 ~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~ 147 (277)
T 3tsc_A 74 RIVAAVVDTRDFD------RLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRI 147 (277)
T ss_dssp CEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred eEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 7899999999875 6666554 58999999997643 2446678999999999999886542
Q ss_pred ---cCCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHh
Q psy7538 164 ---KNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECM 240 (543)
Q Consensus 164 ---~~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~ 240 (543)
+.-.++|++||..+..... ....|+.||+..+.+.+..+
T Consensus 148 ~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~~~~~la 189 (277)
T 3tsc_A 148 IEGGRGGSIILISSAAGMKMQP--------------------------------------FMIHYTASKHAVTGLARAFA 189 (277)
T ss_dssp HHHTSCEEEEEECCGGGTSCCS--------------------------------------SCHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCCEEEEEccHhhCCCCC--------------------------------------CchhhHHHHHHHHHHHHHHH
Confidence 1246899999986643211 01689999999999988765
Q ss_pred h----cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCc-eeEEeecCCcccccchHHHHHHHHHHHhhhhc
Q psy7538 241 E----LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGV-IRSMYCKNTGMADFLPADVAINGVFLFTWDFL 315 (543)
Q Consensus 241 ~----~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~-~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~ 315 (543)
. +++.+..++|+.|..+.... .............. ........ ...-+...+|+|++++.++....
T Consensus 190 ~e~~~~gi~vn~v~PG~v~T~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~-~p~r~~~pedvA~~v~~L~s~~~ 260 (277)
T 3tsc_A 190 AELGKHSIRVNSVHPGPVNTPMGSG--------DMVTAVGQAMETNPQLSHVLTPF-LPDWVAEPEDIADTVCWLASDES 260 (277)
T ss_dssp HHHGGGTEEEEEEEESSBSSGGGSH--------HHHHHHHHHHHTCGGGTTTTCCS-SSCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHhCccCeEEEEEEeCCCcCCcccc--------hhhhhhhhcccccHHHHHHhhhc-cCCCCCCHHHHHHHHHHHhCccc
Confidence 4 58999999999886653210 00000111110100 00001111 11247889999999998886543
Q ss_pred ccCCCCCCcEEEeecC
Q psy7538 316 NSKESERKSVCNLTSN 331 (543)
Q Consensus 316 ~~~~~~~~~vyni~s~ 331 (543)
. -..|+++++.+|
T Consensus 261 ~---~itG~~i~vdGG 273 (277)
T 3tsc_A 261 R---KVTAAQIPVDQG 273 (277)
T ss_dssp T---TCCSCEEEESTT
T ss_pred c---CCcCCEEeeCCC
Confidence 2 135889999876
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.75 E-value=1.8e-17 Score=163.83 Aligned_cols=233 Identities=15% Similarity=0.119 Sum_probs=155.4
Q ss_pred hhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 26 KTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 26 ~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
.-++||+++||||+|+||++++++|++.|. +|+++.|... ++++++. +.++ ....++.++.+
T Consensus 14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~---~V~~~~~~~~-----~~~~~~~-----~~~~-----~~~~~~~~~~~ 75 (270)
T 3is3_A 14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGA---KVVVNYANST-----KDAEKVV-----SEIK-----ALGSDAIAIKA 75 (270)
T ss_dssp TCCTTCEEEESCTTSHHHHHHHHHHHHTTC---EEEEEESSCH-----HHHHHHH-----HHHH-----HTTCCEEEEEC
T ss_pred CCcCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEcCCCH-----HHHHHHH-----HHHH-----hcCCcEEEEEc
Confidence 347899999999999999999999999997 7887776542 2222111 1111 12357889999
Q ss_pred cCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc-cCCceEE
Q psy7538 106 DITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM-KNLKCFT 170 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V 170 (543)
|+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... ..-.++|
T Consensus 76 Dv~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv 149 (270)
T 3is3_A 76 DIRQVP------EIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIV 149 (270)
T ss_dssp CTTSHH------HHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEE
T ss_pred CCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEE
Confidence 999875 6666654 68999999997643 2456778999999999999998764 2234999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+.... .| ....|+.||+..+.+.+..+. +|+.+
T Consensus 150 ~isS~~~~~~~---------~~----------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v 192 (270)
T 3is3_A 150 LTSSNTSKDFS---------VP----------------------------KHSLYSGSKGAVDSFVRIFSKDCGDKKITV 192 (270)
T ss_dssp EECCTTTTTCC---------CT----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEE
T ss_pred EEeCchhccCC---------CC----------------------------CCchhHHHHHHHHHHHHHHHHHhcccCeEE
Confidence 99997531110 00 016899999999999877654 58999
Q ss_pred EEEecCeeeecCCCCCC-CCCCC--CCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCC
Q psy7538 247 MILRPSIVVPIYKEPLP-GWTDN--INGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERK 323 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~-gw~d~--~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~ 323 (543)
..++|+.|..+...... .+... ...+......... ......+..++|+|++++.++..... -..|
T Consensus 193 n~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~p~~r~~~p~dvA~~v~~L~s~~~~---~itG 260 (270)
T 3is3_A 193 NAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAH---------ASPLHRNGWPQDVANVVGFLVSKEGE---WVNG 260 (270)
T ss_dssp EEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHH---------HSTTCSCBCHHHHHHHHHHHTSGGGT---TCCS
T ss_pred EEEEeCCccChhhhhhhhhccccccccchHHHHHHHHh---------cCCCCCCCCHHHHHHHHHHHcCCccC---CccC
Confidence 99999998765422100 00000 0111111111111 11223467799999999988865432 1358
Q ss_pred cEEEeecC
Q psy7538 324 SVCNLTSN 331 (543)
Q Consensus 324 ~vyni~s~ 331 (543)
+++++.+|
T Consensus 261 ~~i~vdGG 268 (270)
T 3is3_A 261 KVLTLDGG 268 (270)
T ss_dssp CEEEESTT
T ss_pred cEEEeCCC
Confidence 89998876
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=7.4e-17 Score=161.42 Aligned_cols=222 Identities=9% Similarity=0.046 Sum_probs=154.6
Q ss_pred hcCCCEEEEEcCcch--hHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEE
Q psy7538 27 TYENKSIFLSGGSGF--LGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVIS 104 (543)
Q Consensus 27 ~~~~~~VlITGatGF--iG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~ 104 (543)
-++||+++||||+|+ ||++++++|++.|. +|++..|..+ ..++++++. .+ ..++.++.
T Consensus 28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~---~V~~~~r~~~---~~~~~~~~~---------~~-----~~~~~~~~ 87 (293)
T 3grk_A 28 LLQGKRGLILGVANNRSIAWGIAKAAREAGA---ELAFTYQGDA---LKKRVEPLA---------EE-----LGAFVAGH 87 (293)
T ss_dssp TTTTCEEEEECCCSSSSHHHHHHHHHHHTTC---EEEEEECSHH---HHHHHHHHH---------HH-----HTCEEEEE
T ss_pred cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCC---EEEEEcCCHH---HHHHHHHHH---------Hh-----cCCceEEE
Confidence 378999999999999 99999999999986 7888888632 123332221 11 13578999
Q ss_pred ccCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCC-------C----cccHHHHHHHHHHHHHHHHHHHHhc-cC
Q psy7538 105 GDITQLKLGISEIDKKELID-------NVDIVYHVAATIR-------F----DEPIKTAVILNTRGTRDMLELSKQM-KN 165 (543)
Q Consensus 105 gDl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~-------~----~~~~~~~~~~Nv~gt~~ll~~a~~~-~~ 165 (543)
+|+++++ +++.+++ ++|++||+||... + .+.++..+++|+.|+.++++++... ..
T Consensus 88 ~Dv~d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~ 161 (293)
T 3grk_A 88 CDVADAA------SIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD 161 (293)
T ss_dssp CCTTCHH------HHHHHHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT
T ss_pred CCCCCHH------HHHHHHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 9999875 6666654 6899999999763 1 2446678999999999999998763 23
Q ss_pred CceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----
Q psy7538 166 LKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME---- 241 (543)
Q Consensus 166 l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~---- 241 (543)
-.++|++||..+..... ....|+.||+..+.+.+..+.
T Consensus 162 ~g~Iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~ 203 (293)
T 3grk_A 162 GGSILTLTYYGAEKVMP--------------------------------------NYNVMGVAKAALEASVKYLAVDLGP 203 (293)
T ss_dssp CEEEEEEECGGGTSBCT--------------------------------------TTTHHHHHHHHHHHHHHHHHHHHGG
T ss_pred CCEEEEEeehhhccCCC--------------------------------------chHHHHHHHHHHHHHHHHHHHHHhH
Confidence 45999999986643211 016899999999999877654
Q ss_pred cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCC
Q psy7538 242 LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESE 321 (543)
Q Consensus 242 ~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~ 321 (543)
+|+.+..++|+.|..+..... .............. ....+...+|+|++++.++..... -.
T Consensus 204 ~gI~vn~v~PG~v~T~~~~~~-------~~~~~~~~~~~~~~---------p~~r~~~pedvA~~v~~L~s~~~~---~i 264 (293)
T 3grk_A 204 QNIRVNAISAGPIKTLAASGI-------GDFRYILKWNEYNA---------PLRRTVTIDEVGDVGLYFLSDLSR---SV 264 (293)
T ss_dssp GTEEEEEEEECCCCC-------------CCHHHHHHHHHHHS---------TTSSCCCHHHHHHHHHHHHSGGGT---TC
T ss_pred hCCEEEEEecCCCcchhhhcc-------cchHHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHcCcccc---CC
Confidence 589999999999977543221 11112222222111 123456789999999888765432 13
Q ss_pred CCcEEEeecC
Q psy7538 322 RKSVCNLTSN 331 (543)
Q Consensus 322 ~~~vyni~s~ 331 (543)
.|+++++.++
T Consensus 265 tG~~i~vdGG 274 (293)
T 3grk_A 265 TGEVHHADSG 274 (293)
T ss_dssp CSCEEEESTT
T ss_pred cceEEEECCC
Confidence 5889999887
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.74 E-value=1.9e-16 Score=154.16 Aligned_cols=214 Identities=13% Similarity=0.085 Sum_probs=149.7
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||||+||++++++|++.|+ +|+++.|+. ++++++.+ .. ++.++.+|+
T Consensus 3 l~~k~vlVTGas~giG~~ia~~l~~~G~---~V~~~~r~~------~~~~~~~~-------------~~--~~~~~~~D~ 58 (245)
T 1uls_A 3 LKDKAVLITGAAHGIGRATLELFAKEGA---RLVACDIEE------GPLREAAE-------------AV--GAHPVVMDV 58 (245)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHHH-------------TT--TCEEEECCT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHHH-------------Hc--CCEEEEecC
Confidence 4689999999999999999999999987 788888863 33332211 11 267889999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++.+++... .+..++|
T Consensus 59 ~~~~------~~~~~~~~~~~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv 132 (245)
T 1uls_A 59 ADPA------SVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIV 132 (245)
T ss_dssp TCHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEE
Confidence 9875 5666554 48999999997542 2446678999999999999888653 2467999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||....+. |. ...|+.||+..+.+.+..+. .|+++
T Consensus 133 ~isS~~~~~~-----------~~----------------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v 173 (245)
T 1uls_A 133 LTASRVYLGN-----------LG----------------------------QANYAASMAGVVGLTRTLALELGRWGIRV 173 (245)
T ss_dssp EECCGGGGCC-----------TT----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred EEccchhcCC-----------CC----------------------------chhHHHHHHHHHHHHHHHHHHHhHhCeEE
Confidence 9999862111 00 15899999998888876554 58999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
.+++|+.|..+.... . . ........... ....+++.+|+|++++.++..... -..++++
T Consensus 174 ~~v~PG~v~t~~~~~-------~-~-~~~~~~~~~~~---------p~~~~~~~~dvA~~v~~l~s~~~~---~~tG~~~ 232 (245)
T 1uls_A 174 NTLAPGFIETRMTAK-------V-P-EKVREKAIAAT---------PLGRAGKPLEVAYAALFLLSDESS---FITGQVL 232 (245)
T ss_dssp EEEEECSBCCTTTSS-------S-C-HHHHHHHHHTC---------TTCSCBCHHHHHHHHHHHHSGGGT---TCCSCEE
T ss_pred EEEEeCcCcCcchhh-------c-C-HHHHHHHHhhC---------CCCCCcCHHHHHHHHHHHhCchhc---CCcCCEE
Confidence 999999886653221 1 1 11222221111 112367899999999988765432 1357888
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
++.++
T Consensus 233 ~vdgG 237 (245)
T 1uls_A 233 FVDGG 237 (245)
T ss_dssp EESTT
T ss_pred EECCC
Confidence 88776
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.74 E-value=8.7e-17 Score=160.11 Aligned_cols=228 Identities=13% Similarity=0.072 Sum_probs=153.5
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|+||++++++|++.|. +|+++.|+. +++++.. +.+ .....++.++.+|+
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~------~~~~~~~-----~~l-----~~~~~~~~~~~~Dv 86 (283)
T 3v8b_A 26 QPSPVALITGAGSGIGRATALALAADGV---TVGALGRTR------TEVEEVA-----DEI-----VGAGGQAIALEADV 86 (283)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESSH------HHHHHHH-----HHH-----TTTTCCEEEEECCT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHH-----HHH-----HhcCCcEEEEEccC
Confidence 4689999999999999999999999986 888998864 2222211 111 22235788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC--------cccHHHHHHHHHHHHHHHHHHH----HhccCCce
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF--------DEPIKTAVILNTRGTRDMLELS----KQMKNLKC 168 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~l~~ 168 (543)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++ ++. +..+
T Consensus 87 ~d~~------~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~ 159 (283)
T 3v8b_A 87 SDEL------QMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQR-GGGA 159 (283)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEE
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCce
Confidence 9875 5666554 69999999997432 2346678999999999999988 333 5679
Q ss_pred EEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCC
Q psy7538 169 FTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGM 244 (543)
Q Consensus 169 ~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~l 244 (543)
+|++||..+.... +.| ....|+.||+..+.+.+..+. +|+
T Consensus 160 Iv~isS~~~~~~~--------~~~----------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI 203 (283)
T 3v8b_A 160 IVVVSSINGTRTF--------TTP----------------------------GATAYTATKAAQVAIVQQLALELGKHHI 203 (283)
T ss_dssp EEEECCSBTTTBC--------CST----------------------------TCHHHHHHHHHHHHHHHHHHHHTTTTTE
T ss_pred EEEEcChhhccCC--------CCC----------------------------CchHHHHHHHHHHHHHHHHHHHhCccCc
Confidence 9999998653210 000 016899999999999887665 579
Q ss_pred cEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcc--cccchHHHHHHHHHHHhhhhcccCCCCC
Q psy7538 245 PCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGM--ADFLPADVAINGVFLFTWDFLNSKESER 322 (543)
Q Consensus 245 p~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~--~d~V~vddva~a~i~a~~~~~~~~~~~~ 322 (543)
.+..++|+.|..+...... ..+. . .. ............. ..+...+|+|++++.++..... -..
T Consensus 204 ~vn~v~PG~v~T~~~~~~~------~~~~-~--~~--~~~~~~~~~~~p~~~~r~~~pedvA~~v~fL~s~~a~---~it 269 (283)
T 3v8b_A 204 RVNAVCPGAIETNISDNTK------LRHE-E--ET--AIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSERAR---HVT 269 (283)
T ss_dssp EEEEEEECSBSSCTTCCTT------BCCH-H--HH--SCCCBCTTCSCGGGTTCCBCHHHHHHHHHHHTSGGGT---TCC
T ss_pred EEEEEEeCCCcCCcccccc------cccc-h--hh--hhhhhhhhhcCccccCCCCCHHHHHHHHHHHcCcccc---CCc
Confidence 9999999998765432210 0000 0 00 0000000011111 3456789999999988765432 135
Q ss_pred CcEEEeecC
Q psy7538 323 KSVCNLTSN 331 (543)
Q Consensus 323 ~~vyni~s~ 331 (543)
|+++++.+|
T Consensus 270 G~~i~vdGG 278 (283)
T 3v8b_A 270 GSPVWIDGG 278 (283)
T ss_dssp SCEEEESTT
T ss_pred CCEEEECcC
Confidence 889998776
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=2.3e-16 Score=157.13 Aligned_cols=238 Identities=13% Similarity=0.096 Sum_probs=158.7
Q ss_pred hhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCC----------CHHHHHHHHhcCchhHHHHhhcCcC
Q psy7538 26 KTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGK----------TPNQRVEELFESPVFDALKTLRGKS 95 (543)
Q Consensus 26 ~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~----------~~~~rl~~~~~~~~f~~l~~~~~~~ 95 (543)
.-++||+++||||+|+||++++++|++.|. +|+++.|++... ...+++++..+ .+ ..
T Consensus 7 ~~l~~k~~lVTGas~gIG~aia~~la~~G~---~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-----~~ 73 (286)
T 3uve_A 7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGA---DIIAVDICKPIRAGVVDTAIPASTPEDLAETAD-----LV-----KG 73 (286)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHH-----HH-----HT
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCC---eEEEEeccccccccccccccccCCHHHHHHHHH-----HH-----hh
Confidence 346899999999999999999999999997 788888874211 11344433211 11 12
Q ss_pred CCCceEEEEccCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC--------cccHHHHHHHHHHHHHHHHHHH
Q psy7538 96 ILQKIQVISGDITQLKLGISEIDKKELID-------NVDIVYHVAATIRF--------DEPIKTAVILNTRGTRDMLELS 160 (543)
Q Consensus 96 ~~~~v~~i~gDl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~~a 160 (543)
...++.++.+|+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++
T Consensus 74 ~~~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~ 147 (286)
T 3uve_A 74 HNRRIVTAEVDVRDYD------ALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAG 147 (286)
T ss_dssp TTCCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred cCCceEEEEcCCCCHH------HHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 2357899999999875 6666654 79999999997532 2346678999999999999987
Q ss_pred Hhc----cCCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHH
Q psy7538 161 KQM----KNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLV 236 (543)
Q Consensus 161 ~~~----~~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v 236 (543)
... +.-.++|++||..+..... ....|+.||+..+.+.
T Consensus 148 ~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~~~ 189 (286)
T 3uve_A 148 VPHMIAGGRGGSIILTSSVGGLKAYP--------------------------------------HTGHYVAAKHGVVGLM 189 (286)
T ss_dssp HHHHHHHTSCEEEEEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCcEEEEECchhhccCCC--------------------------------------CccHHHHHHHHHHHHH
Confidence 642 1246899999986643211 0168999999999888
Q ss_pred HHHhh----cCCcEEEEecCeeeecCCCCCCC---CCCCC--CchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHH
Q psy7538 237 AECME----LGMPCMILRPSIVVPIYKEPLPG---WTDNI--NGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGV 307 (543)
Q Consensus 237 ~~~~~----~~lp~~IlRps~V~G~~~~p~~g---w~d~~--~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~ 307 (543)
+..+. +++.+..++|+.|..+....... +.... ..+.... .... ...... ..+...+|+|+++
T Consensus 190 ~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------~~~~~p-~r~~~p~dvA~~v 261 (286)
T 3uve_A 190 RAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMA-PICQ------MFHTLP-IPWVEPIDISNAV 261 (286)
T ss_dssp HHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHH-HHHH------TTCSSS-CSCBCHHHHHHHH
T ss_pred HHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHH-HHHH------hhhccC-CCcCCHHHHHHHH
Confidence 77654 58999999999997764321000 00000 0111110 0000 000111 4678999999999
Q ss_pred HHHhhhhcccCCCCCCcEEEeecC
Q psy7538 308 FLFTWDFLNSKESERKSVCNLTSN 331 (543)
Q Consensus 308 i~a~~~~~~~~~~~~~~vyni~s~ 331 (543)
+.++..... -..|+++++.+|
T Consensus 262 ~fL~s~~a~---~itG~~i~vdGG 282 (286)
T 3uve_A 262 LFFASDEAR---YITGVTLPIDAG 282 (286)
T ss_dssp HHHHSGGGT---TCCSCEEEESTT
T ss_pred HHHcCcccc---CCcCCEEeECCc
Confidence 988865432 135889999877
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.74 E-value=4e-17 Score=159.81 Aligned_cols=210 Identities=13% Similarity=0.139 Sum_probs=147.1
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
.+++|+|+||||+|+||++++++|++.|+ +|+++.|+... .+.+.++.+|
T Consensus 18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~---------------------------~~~~~~~~~D 67 (253)
T 2nm0_A 18 SHMSRSVLVTGGNRGIGLAIARAFADAGD---KVAITYRSGEP---------------------------PEGFLAVKCD 67 (253)
T ss_dssp --CCCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSSCC---------------------------CTTSEEEECC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCChHh---------------------------hccceEEEec
Confidence 35789999999999999999999999986 78899997532 1237789999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceE
Q psy7538 107 ITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCF 169 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~ 169 (543)
+++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++++++... .+..++
T Consensus 68 l~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~i 141 (253)
T 2nm0_A 68 ITDTE------QVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRV 141 (253)
T ss_dssp TTSHH------HHHHHHHHHHHHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEE
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 99875 6666554 47999999997532 2456788999999999999877542 256799
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+..... . ...|+.||+..+.+.+..+. .++.
T Consensus 142 v~isS~~~~~~~~-------------~-------------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~ 183 (253)
T 2nm0_A 142 VLISSVVGLLGSA-------------G-------------------------QANYAASKAGLVGFARSLARELGSRNIT 183 (253)
T ss_dssp EEECCCCCCCCHH-------------H-------------------------HHHHHHHHHHHHHHHHHHHHHHCSSSEE
T ss_pred EEECchhhCCCCC-------------C-------------------------cHHHHHHHHHHHHHHHHHHHHhhhcCeE
Confidence 9999986542100 0 05899999999998877654 5899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
+.+++|+.|..+.....+ .......... .....+++.+|+|++++.++..... ...+++
T Consensus 184 vn~v~PG~v~T~~~~~~~---------~~~~~~~~~~---------~p~~~~~~p~dvA~~i~~l~s~~~~---~~tG~~ 242 (253)
T 2nm0_A 184 FNVVAPGFVDTDMTKVLT---------DEQRANIVSQ---------VPLGRYARPEEIAATVRFLASDDAS---YITGAV 242 (253)
T ss_dssp EEEEEECSBCC------------------CHHHHHTT---------CTTCSCBCHHHHHHHHHHHHSGGGT---TCCSCE
T ss_pred EEEEEeCcCcCcchhhcC---------HHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCcccc---CCcCcE
Confidence 999999987554321100 0001111111 1123478999999999988865432 135788
Q ss_pred EEeecC
Q psy7538 326 CNLTSN 331 (543)
Q Consensus 326 yni~s~ 331 (543)
+++.++
T Consensus 243 i~vdGG 248 (253)
T 2nm0_A 243 IPVDGG 248 (253)
T ss_dssp EEESTT
T ss_pred EEECCc
Confidence 988776
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.74 E-value=2.7e-17 Score=163.46 Aligned_cols=217 Identities=13% Similarity=0.119 Sum_probs=152.3
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
-++||+++||||+|+||++++++|++.|+ +|+++.|+. ++++++.+ ....++.++.+|
T Consensus 27 ~l~~k~vlVTGas~GIG~aia~~l~~~G~---~Vi~~~r~~------~~~~~~~~-------------~~~~~~~~~~~D 84 (281)
T 3ppi_A 27 QFEGASAIVSGGAGGLGEATVRRLHADGL---GVVIADLAA------EKGKALAD-------------ELGNRAEFVSTN 84 (281)
T ss_dssp GGTTEEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHHH-------------HHCTTEEEEECC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCh------HHHHHHHH-------------HhCCceEEEEcC
Confidence 36899999999999999999999999987 788998863 23332211 112478899999
Q ss_pred CCCCCCCCCHHHHHHHhc------CccEEEEcCccCCC-------------cccHHHHHHHHHHHHHHHHHHHHhc----
Q psy7538 107 ITQLKLGISEIDKKELID------NVDIVYHVAATIRF-------------DEPIKTAVILNTRGTRDMLELSKQM---- 163 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~------~vd~ViH~AA~v~~-------------~~~~~~~~~~Nv~gt~~ll~~a~~~---- 163 (543)
+++++ +++.+++ ++|++||+||.... .+.+...+++|+.|+.++++++...
T Consensus 85 l~~~~------~v~~~~~~~~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 158 (281)
T 3ppi_A 85 VTSED------SVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAA 158 (281)
T ss_dssp TTCHH------HHHHHHHHHTTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred CCCHH------HHHHHHHHHHHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhh
Confidence 99875 6666654 58999999553311 1235778999999999999988642
Q ss_pred -----cCCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHH
Q psy7538 164 -----KNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAE 238 (543)
Q Consensus 164 -----~~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~ 238 (543)
++-.++|++||..+..... ....|+.||+..+.+.+.
T Consensus 159 ~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~~~~~ 200 (281)
T 3ppi_A 159 EPRENGERGALVLTASIAGYEGQI--------------------------------------GQTAYAAAKAGVIGLTIA 200 (281)
T ss_dssp CCCTTSCCEEEEEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred cccccCCCeEEEEEecccccCCCC--------------------------------------CCcccHHHHHHHHHHHHH
Confidence 1345899999986653211 016899999988888776
Q ss_pred Hhh----cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhh
Q psy7538 239 CME----LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDF 314 (543)
Q Consensus 239 ~~~----~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~ 314 (543)
.+. .++.+..++|+.|..+.... .. ............ ....++.++|+|++++.++...
T Consensus 201 la~e~~~~gi~v~~v~PG~v~T~~~~~--------~~-~~~~~~~~~~~~--------~~~~~~~pedvA~~v~~l~s~~ 263 (281)
T 3ppi_A 201 AARDLSSAGIRVNTIAPGTMKTPIMES--------VG-EEALAKFAANIP--------FPKRLGTPDEFADAAAFLLTNG 263 (281)
T ss_dssp HHHHHGGGTEEEEEEEECSBCCHHHHT--------TC-HHHHHHHHHTCC--------SSSSCBCHHHHHHHHHHHHHCS
T ss_pred HHHHHhhcCeEEEEEecCcCCchhhhc--------cc-HHHHHHHHhcCC--------CCCCCCCHHHHHHHHHHHHcCC
Confidence 554 58999999999886543211 01 112222222211 1145788999999999888754
Q ss_pred cccCCCCCCcEEEeecC
Q psy7538 315 LNSKESERKSVCNLTSN 331 (543)
Q Consensus 315 ~~~~~~~~~~vyni~s~ 331 (543)
.. .|+++++.++
T Consensus 264 ~~-----tG~~i~vdGG 275 (281)
T 3ppi_A 264 YI-----NGEVMRLDGA 275 (281)
T ss_dssp SC-----CSCEEEESTT
T ss_pred Cc-----CCcEEEECCC
Confidence 33 5889999887
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.7e-17 Score=163.31 Aligned_cols=223 Identities=13% Similarity=0.104 Sum_probs=147.7
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||+|+||++++++|++.|. +|+++.|.... .++++++. +.+ .....++.++.+|+
T Consensus 9 l~~k~vlVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~---~~~~~~~~-----~~~-----~~~~~~~~~~~~Dv 72 (262)
T 3ksu_A 9 LKNKVIVIAGGIKNLGALTAKTFALESV---NLVLHYHQAKD---SDTANKLK-----DEL-----EDQGAKVALYQSDL 72 (262)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHTTSSC---EEEEEESCGGG---HHHHHHHH-----HHH-----HTTTCEEEEEECCC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEecCccC---HHHHHHHH-----HHH-----HhcCCcEEEEECCC
Confidence 5789999999999999999999999986 78888886433 22332221 111 12235789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc-cCCceEEEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM-KNLKCFTYI 172 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~v 172 (543)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... ++-.++|++
T Consensus 73 ~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~i 146 (262)
T 3ksu_A 73 SNEE------EVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITI 146 (262)
T ss_dssp CSHH------HHHHHHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEE
Confidence 9875 6666654 68999999996532 2445678999999999999999763 234689999
Q ss_pred ecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEE
Q psy7538 173 STAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMI 248 (543)
Q Consensus 173 ST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~I 248 (543)
||..+..... ....|+.||+..+.+.+..+. .++.+..
T Consensus 147 sS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~ 188 (262)
T 3ksu_A 147 ATSLLAAYTG--------------------------------------FYSTYAGNKAPVEHYTRAASKELMKQQISVNA 188 (262)
T ss_dssp CCCHHHHHHC--------------------------------------CCCC-----CHHHHHHHHHHHHTTTTTCEEEE
T ss_pred echhhccCCC--------------------------------------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEE
Confidence 9985532110 015799999999999887665 4899999
Q ss_pred EecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEe
Q psy7538 249 LRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNL 328 (543)
Q Consensus 249 lRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni 328 (543)
++|+.|..+.... ..................+...+|+|++++.++.. .. -..|+++++
T Consensus 189 v~PG~v~T~~~~~-----------------~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~-~~---~itG~~i~v 247 (262)
T 3ksu_A 189 IAPGPMDTSFFYG-----------------QETKESTAFHKSQAMGNQLTKIEDIAPIIKFLTTD-GW---WINGQTIFA 247 (262)
T ss_dssp EEECCCCTHHHHT-----------------CC------------CCCCSCCGGGTHHHHHHHHTT-TT---TCCSCEEEE
T ss_pred EeeCCCcCccccc-----------------cCchHHHHHHHhcCcccCCCCHHHHHHHHHHHcCC-CC---CccCCEEEE
Confidence 9999875432110 00000000111122233567889999999988765 22 135889999
Q ss_pred ecC
Q psy7538 329 TSN 331 (543)
Q Consensus 329 ~s~ 331 (543)
.++
T Consensus 248 dGg 250 (262)
T 3ksu_A 248 NGG 250 (262)
T ss_dssp STT
T ss_pred CCC
Confidence 876
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.74 E-value=5.8e-17 Score=159.45 Aligned_cols=199 Identities=13% Similarity=0.113 Sum_probs=138.8
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||+|+||++++++|++.|. +|+++.|+. ++++++ .+.+. ....++.++.+|+
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~---~V~~~~r~~------~~~~~~-----~~~~~-----~~~~~~~~~~~D~ 87 (262)
T 3rkr_A 27 LSGQVAVVTGASRGIGAAIARKLGSLGA---RVVLTARDV------EKLRAV-----EREIV-----AAGGEAESHACDL 87 (262)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHH-----HHHHH-----HTTCEEEEEECCT
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEECCH------HHHHHH-----HHHHH-----HhCCceeEEEecC
Confidence 6789999999999999999999999986 788998864 222221 11111 1235788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC--------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF--------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~ 169 (543)
++++ ++..+++ .+|+|||+||.... .+.++..+++|+.|+.++++++... .+..++
T Consensus 88 ~~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~i 161 (262)
T 3rkr_A 88 SHSD------AIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHI 161 (262)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEE
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceE
Confidence 9875 5665554 58999999997321 2445678999999999999887541 256799
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+..... ....|+.||+..+.+++..+. .+++
T Consensus 162 v~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~ 203 (262)
T 3rkr_A 162 INISSLAGKNPVA--------------------------------------DGAAYTASKWGLNGLMTSAAEELRQHQVR 203 (262)
T ss_dssp EEECSSCSSCCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred EEEechhhcCCCC--------------------------------------CCchHHHHHHHHHHHHHHHHHHhhhcCcE
Confidence 9999986643211 016899999999998877654 5899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhc
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFL 315 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~ 315 (543)
+.+++||.|..+.... .. .......++..+|+|++++.++....
T Consensus 204 v~~v~PG~v~t~~~~~-----------------~~---------~~~~~~~~~~p~dvA~~v~~l~s~~~ 247 (262)
T 3rkr_A 204 VSLVAPGSVRTEFGVG-----------------LS---------AKKSALGAIEPDDIADVVALLATQAD 247 (262)
T ss_dssp EEEEEECCC------------------------------------------CCCHHHHHHHHHHHHTCCT
T ss_pred EEEEecCCCcCCcccc-----------------cc---------cccccccCCCHHHHHHHHHHHhcCcc
Confidence 9999999875542211 00 00122346789999999988886644
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.74 E-value=6.5e-17 Score=159.62 Aligned_cols=222 Identities=13% Similarity=0.068 Sum_probs=148.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
.++|+++||||+|+||++++++|++.|. +|++..+.... ..+.+.+. + .....++.++.+|+
T Consensus 25 ~~~k~~lVTGas~GIG~aia~~la~~G~---~Vv~~~~~~~~--~~~~~~~~--------~-----~~~~~~~~~~~~Dl 86 (267)
T 3u5t_A 25 ETNKVAIVTGASRGIGAAIAARLASDGF---TVVINYAGKAA--AAEEVAGK--------I-----EAAGGKALTAQADV 86 (267)
T ss_dssp --CCEEEEESCSSHHHHHHHHHHHHHTC---EEEEEESSCSH--HHHHHHHH--------H-----HHTTCCEEEEECCT
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEcCCCHH--HHHHHHHH--------H-----HhcCCeEEEEEcCC
Confidence 4689999999999999999999999997 77776554321 11222111 1 11235788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc-cCCceEEEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM-KNLKCFTYI 172 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~v 172 (543)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... ..-.++|++
T Consensus 87 ~~~~------~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~i 160 (267)
T 3u5t_A 87 SDPA------AVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINM 160 (267)
T ss_dssp TCHH------HHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEE
Confidence 9875 6666654 78999999997542 2346678899999999999888653 223589999
Q ss_pred ecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEE
Q psy7538 173 STAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMI 248 (543)
Q Consensus 173 ST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~I 248 (543)
||..+..... ....|+.||+..+.+.+..+. .|+.+..
T Consensus 161 sS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~ 202 (267)
T 3u5t_A 161 STSQVGLLHP--------------------------------------SYGIYAAAKAGVEAMTHVLSKELRGRDITVNA 202 (267)
T ss_dssp CCTHHHHCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEE
T ss_pred eChhhccCCC--------------------------------------CchHHHHHHHHHHHHHHHHHHHhhhhCCEEEE
Confidence 9985532211 016899999999999987765 4899999
Q ss_pred EecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEe
Q psy7538 249 LRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNL 328 (543)
Q Consensus 249 lRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni 328 (543)
++|+.|..+.... . ........... ......+..++|+|++++.++..... -..|+++++
T Consensus 203 v~PG~v~T~~~~~------~--~~~~~~~~~~~---------~~p~~r~~~pedvA~~v~~L~s~~~~---~itG~~i~v 262 (267)
T 3u5t_A 203 VAPGPTATDLFLE------G--KSDEVRDRFAK---------LAPLERLGTPQDIAGAVAFLAGPDGA---WVNGQVLRA 262 (267)
T ss_dssp EEECCBC-------------------CHHHHHT---------SSTTCSCBCHHHHHHHHHHHHSTTTT---TCCSEEEEE
T ss_pred EEECCCcCccccc------c--CCHHHHHHHHh---------cCCCCCCcCHHHHHHHHHHHhCcccc---CccCCEEEe
Confidence 9999886543210 0 00011111111 12234567899999999888765432 135888888
Q ss_pred ecC
Q psy7538 329 TSN 331 (543)
Q Consensus 329 ~s~ 331 (543)
.+|
T Consensus 263 dGG 265 (267)
T 3u5t_A 263 NGG 265 (267)
T ss_dssp SSS
T ss_pred CCC
Confidence 765
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.74 E-value=4.3e-17 Score=162.63 Aligned_cols=228 Identities=18% Similarity=0.167 Sum_probs=155.7
Q ss_pred hhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEE
Q psy7538 25 AKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVIS 104 (543)
Q Consensus 25 ~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~ 104 (543)
..-++||+++||||+|+||++++++|++.|....+|++..|+. ++++++. +.+.... ...++.++.
T Consensus 28 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~------~~~~~~~-----~~l~~~~---~~~~~~~~~ 93 (287)
T 3rku_A 28 AERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRL------EKLEELK-----KTIDQEF---PNAKVHVAQ 93 (287)
T ss_dssp HHHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCH------HHHHHHH-----HHHHHHC---TTCEEEEEE
T ss_pred hhhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCH------HHHHHHH-----HHHHhhC---CCCeEEEEE
Confidence 3457899999999999999999999999986545888888864 2332221 1122111 135788999
Q ss_pred ccCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCC----C----cccHHHHHHHHHHHHHHHHHHHHhc---cCC
Q psy7538 105 GDITQLKLGISEIDKKELID-------NVDIVYHVAATIR----F----DEPIKTAVILNTRGTRDMLELSKQM---KNL 166 (543)
Q Consensus 105 gDl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l 166 (543)
+|+++++ +++.+++ ++|++||+||... + .+.++..+++|+.|+.++++++... .+.
T Consensus 94 ~Dv~d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~ 167 (287)
T 3rku_A 94 LDITQAE------KIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNS 167 (287)
T ss_dssp CCTTCGG------GHHHHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999987 6777765 5899999999653 1 2456778999999999999988421 256
Q ss_pred ceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----c
Q psy7538 167 KCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----L 242 (543)
Q Consensus 167 ~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~ 242 (543)
.++|++||..+..... ....|+.||+..+.+.+..+. +
T Consensus 168 g~IV~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~ 209 (287)
T 3rku_A 168 GDIVNLGSIAGRDAYP--------------------------------------TGSIYCASKFAVGAFTDSLRKELINT 209 (287)
T ss_dssp CEEEEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred CeEEEECChhhcCCCC--------------------------------------CCchHHHHHHHHHHHHHHHHHHhhhc
Confidence 7999999986643211 016899999999999887655 5
Q ss_pred CCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCC
Q psy7538 243 GMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322 (543)
Q Consensus 243 ~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~ 322 (543)
|+++..++|+.|..+.... ...+............ ..+..+|+|++++.++..... -..
T Consensus 210 gIrvn~v~PG~v~T~~~~~------~~~~~~~~~~~~~~~~------------~p~~pedvA~~v~~l~s~~~~---~i~ 268 (287)
T 3rku_A 210 KIRVILIAPGLVETEFSLV------RYRGNEEQAKNVYKDT------------TPLMADDVADLIVYATSRKQN---TVI 268 (287)
T ss_dssp SCEEEEEEESCEESSHHHH------HTTTCHHHHHHHHTTS------------CCEEHHHHHHHHHHHHTSCTT---EEE
T ss_pred CCEEEEEeCCcCcCccccc------cccCcHHHHHHhhccc------------CCCCHHHHHHHHHHHhCCCCC---eEe
Confidence 8999999999886642100 0000011111111111 122789999999988866432 123
Q ss_pred CcEEEeecC
Q psy7538 323 KSVCNLTSN 331 (543)
Q Consensus 323 ~~vyni~s~ 331 (543)
++++++.++
T Consensus 269 g~~i~v~~g 277 (287)
T 3rku_A 269 ADTLIFPTN 277 (287)
T ss_dssp EEEEEEETT
T ss_pred cceEEeeCC
Confidence 678888776
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.2e-16 Score=156.17 Aligned_cols=198 Identities=13% Similarity=0.112 Sum_probs=145.2
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+|+|+||||+|+||++++++|++.|+ +|+++.|+.... .-..+.+|+++
T Consensus 22 ~k~vlITGas~gIG~~la~~l~~~G~---~V~~~~r~~~~~----------------------------~~~~~~~d~~d 70 (251)
T 3orf_A 22 SKNILVLGGSGALGAEVVKFFKSKSW---NTISIDFRENPN----------------------------ADHSFTIKDSG 70 (251)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCCTT----------------------------SSEEEECSCSS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCcccc----------------------------cccceEEEeCC
Confidence 68999999999999999999999987 799999986431 11346788877
Q ss_pred CCCCCCHHHHHHHhc-------CccEEEEcCccCCC--------cccHHHHHHHHHHHHHHHHHHHHhc-cCCceEEEEe
Q psy7538 110 LKLGISEIDKKELID-------NVDIVYHVAATIRF--------DEPIKTAVILNTRGTRDMLELSKQM-KNLKCFTYIS 173 (543)
Q Consensus 110 ~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~vS 173 (543)
++ +++.+++ .+|+|||+||.... .+.++..+++|+.|+.++++++... ..-.++|++|
T Consensus 71 ~~------~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 144 (251)
T 3orf_A 71 EE------EIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTG 144 (251)
T ss_dssp HH------HHHHHHHHHHTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HH------HHHHHHHHHHHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEe
Confidence 64 6666554 46999999996421 2445678999999999999998763 1224899999
Q ss_pred cCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh------cCCcEE
Q psy7538 174 TAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME------LGMPCM 247 (543)
Q Consensus 174 T~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~------~~lp~~ 247 (543)
|..+...... ...|+.||+..|.+.+..+. .++.+.
T Consensus 145 S~~~~~~~~~--------------------------------------~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~ 186 (251)
T 3orf_A 145 ASAALNRTSG--------------------------------------MIAYGATKAATHHIIKDLASENGGLPAGSTSL 186 (251)
T ss_dssp CGGGGSCCTT--------------------------------------BHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEE
T ss_pred chhhccCCCC--------------------------------------CchhHHHHHHHHHHHHHHHHHhcccCCCcEEE
Confidence 9866532110 16899999999999987654 368999
Q ss_pred EEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhh-hcccCCCCCCcEE
Q psy7538 248 ILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWD-FLNSKESERKSVC 326 (543)
Q Consensus 248 IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~-~~~~~~~~~~~vy 326 (543)
+++|+.|.++. ...... ......+++++|+|++++.++.. ... ...|+++
T Consensus 187 ~v~PG~v~t~~-----------------~~~~~~---------~~~~~~~~~~~dva~~i~~l~~~~~~~---~~tG~~i 237 (251)
T 3orf_A 187 GILPVTLDTPT-----------------NRKYMS---------DANFDDWTPLSEVAEKLFEWSTNSDSR---PTNGSLV 237 (251)
T ss_dssp EEEESCBCCHH-----------------HHHHCT---------TSCGGGSBCHHHHHHHHHHHHHCGGGC---CCTTCEE
T ss_pred EEecCcCcCcc-----------------hhhhcc---------cccccccCCHHHHHHHHHHHhcCcccc---CCcceEE
Confidence 99998775431 111111 12345678999999999998877 322 1358899
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
++.++
T Consensus 238 ~v~~g 242 (251)
T 3orf_A 238 KFETK 242 (251)
T ss_dssp EEEEE
T ss_pred EEecC
Confidence 98876
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=7.6e-17 Score=161.57 Aligned_cols=222 Identities=12% Similarity=0.031 Sum_probs=156.7
Q ss_pred hcCCCEEEEEcCcc--hhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEE
Q psy7538 27 TYENKSIFLSGGSG--FLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVIS 104 (543)
Q Consensus 27 ~~~~~~VlITGatG--FiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~ 104 (543)
-++||+++||||+| +||++++++|++.|. +|+++.|+.+. .++++++.+ + ..++.++.
T Consensus 27 ~l~~k~vlVTGasg~~GIG~~ia~~la~~G~---~V~~~~r~~~~---~~~~~~~~~---------~-----~~~~~~~~ 86 (296)
T 3k31_A 27 LMEGKKGVIIGVANDKSLAWGIAKAVCAQGA---EVALTYLSETF---KKRVDPLAE---------S-----LGVKLTVP 86 (296)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHHTTC---EEEEEESSGGG---HHHHHHHHH---------H-----HTCCEEEE
T ss_pred ccCCCEEEEEeCCCCCCHHHHHHHHHHHCCC---EEEEEeCChHH---HHHHHHHHH---------h-----cCCeEEEE
Confidence 46899999999998 999999999999987 78899997432 333333211 1 12467899
Q ss_pred ccCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-----------cccHHHHHHHHHHHHHHHHHHHHhc-cC
Q psy7538 105 GDITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-----------DEPIKTAVILNTRGTRDMLELSKQM-KN 165 (543)
Q Consensus 105 gDl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-----------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~ 165 (543)
+|+++++ +++.+++ ++|++||+||.... .+.+...+++|+.|+.++++++... ..
T Consensus 87 ~Dv~d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~ 160 (296)
T 3k31_A 87 CDVSDAE------SVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN 160 (296)
T ss_dssp CCTTCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT
T ss_pred cCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999875 6666654 68999999997531 2446678999999999999998763 22
Q ss_pred CceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----
Q psy7538 166 LKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME---- 241 (543)
Q Consensus 166 l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~---- 241 (543)
-.++|++||..+..... ....|+.||+..+.+.+..+.
T Consensus 161 ~g~IV~isS~~~~~~~~--------------------------------------~~~~Y~asKaal~~l~~~la~e~~~ 202 (296)
T 3k31_A 161 GGSILTLSYYGAEKVVP--------------------------------------HYNVMGVCKAALEASVKYLAVDLGK 202 (296)
T ss_dssp CEEEEEEECGGGTSCCT--------------------------------------TTTHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEEEehhhccCCC--------------------------------------CchhhHHHHHHHHHHHHHHHHHHhh
Confidence 35999999986643211 016899999999999887654
Q ss_pred cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCC
Q psy7538 242 LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESE 321 (543)
Q Consensus 242 ~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~ 321 (543)
+++.+..++|+.|..+..... .............. ....+...+|+|++++.++..... -.
T Consensus 203 ~gIrvn~v~PG~v~T~~~~~~-------~~~~~~~~~~~~~~---------p~~r~~~pedvA~~v~fL~s~~a~---~i 263 (296)
T 3k31_A 203 QQIRVNAISAGPVRTLASSGI-------SDFHYILTWNKYNS---------PLRRNTTLDDVGGAALYLLSDLGR---GT 263 (296)
T ss_dssp TTEEEEEEEECCCCCSSCCSC-------HHHHHHHHHHHHHS---------TTSSCCCHHHHHHHHHHHHSGGGT---TC
T ss_pred cCcEEEEEEECCCcCchhhcc-------cchHHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHcCCccC---Cc
Confidence 589999999999987643221 11111222222111 122456789999999988865432 13
Q ss_pred CCcEEEeecC
Q psy7538 322 RKSVCNLTSN 331 (543)
Q Consensus 322 ~~~vyni~s~ 331 (543)
.|+++++.+|
T Consensus 264 tG~~i~vdGG 273 (296)
T 3k31_A 264 TGETVHVDCG 273 (296)
T ss_dssp CSCEEEESTT
T ss_pred cCCEEEECCC
Confidence 5889999887
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.73 E-value=5.1e-17 Score=155.82 Aligned_cols=202 Identities=10% Similarity=0.015 Sum_probs=145.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|+||++++++|++.|+ +|+++.|.. . +|+
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~l~~~G~---~V~~~~r~~--------------------------~----------~D~ 44 (223)
T 3uce_A 4 SDKTVYVVLGGTSGIGAELAKQLESEHT---IVHVASRQT--------------------------G----------LDI 44 (223)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHCSTTE---EEEEESGGG--------------------------T----------CCT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEecCCc--------------------------c----------cCC
Confidence 4689999999999999999999999986 788888753 1 788
Q ss_pred CCCCCCCCHHHHHHHhc---CccEEEEcCccCCC--------cccHHHHHHHHHHHHHHHHHHHHhc-cCCceEEEEecC
Q psy7538 108 TQLKLGISEIDKKELID---NVDIVYHVAATIRF--------DEPIKTAVILNTRGTRDMLELSKQM-KNLKCFTYISTA 175 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~---~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~vST~ 175 (543)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... +.-.++|++||.
T Consensus 45 ~~~~------~v~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~ 118 (223)
T 3uce_A 45 SDEK------SVYHYFETIGAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGM 118 (223)
T ss_dssp TCHH------HHHHHHHHHCSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCG
T ss_pred CCHH------HHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecch
Confidence 8765 6666664 68999999997521 2446678999999999999999764 222489999998
Q ss_pred ccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh--cCCcEEEEecCe
Q psy7538 176 YCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME--LGMPCMILRPSI 253 (543)
Q Consensus 176 y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~--~~lp~~IlRps~ 253 (543)
.+..... ....|+.||+..|.+.+..+. ..+.+..++|+.
T Consensus 119 ~~~~~~~--------------------------------------~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~ 160 (223)
T 3uce_A 119 LSRKVVA--------------------------------------NTYVKAAINAAIEATTKVLAKELAPIRVNAISPGL 160 (223)
T ss_dssp GGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEECS
T ss_pred hhccCCC--------------------------------------CchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCC
Confidence 6643211 016899999999999988776 248999999999
Q ss_pred eeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecC
Q psy7538 254 VVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSN 331 (543)
Q Consensus 254 V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~ 331 (543)
|.++.....+. .....+......+ .....+..++|+|++++.++..... .|+++++.++
T Consensus 161 v~t~~~~~~~~-----~~~~~~~~~~~~~---------~~~~~~~~~~dvA~~~~~l~~~~~~-----tG~~i~vdgG 219 (223)
T 3uce_A 161 TKTEAYKGMNA-----DDRDAMYQRTQSH---------LPVGKVGEASDIAMAYLFAIQNSYM-----TGTVIDVDGG 219 (223)
T ss_dssp BCSGGGTTSCH-----HHHHHHHHHHHHH---------STTCSCBCHHHHHHHHHHHHHCTTC-----CSCEEEESTT
T ss_pred Ccchhhhhcch-----hhHHHHHHHHhhc---------CCCCCccCHHHHHHHHHHHccCCCC-----CCcEEEecCC
Confidence 87764332110 0001112222211 1234577899999999988864332 5889999877
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.3e-16 Score=154.05 Aligned_cols=200 Identities=19% Similarity=0.180 Sum_probs=142.9
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
++|+++||||+|+||++++++|++.|+ +|+++.|+. +++++.. +.+.. ....++.++.+|++
T Consensus 1 ~~k~vlITGas~gIG~~ia~~l~~~G~---~V~~~~r~~------~~~~~~~-----~~~~~----~~~~~~~~~~~D~~ 62 (235)
T 3l77_A 1 EMKVAVITGASRGIGEAIARALARDGY---ALALGARSV------DRLEKIA-----HELMQ----EQGVEVFYHHLDVS 62 (235)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH-----HHHHH----HHCCCEEEEECCTT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHH-----HHHHh----hcCCeEEEEEeccC
Confidence 478999999999999999999999987 788998864 2333221 11111 11357889999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc--cCCceEEEE
Q psy7538 109 QLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM--KNLKCFTYI 172 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~l~~~V~v 172 (543)
+++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... ++-.++|++
T Consensus 63 ~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~ 136 (235)
T 3l77_A 63 KAE------SVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVT 136 (235)
T ss_dssp CHH------HHHHHCC-HHHHHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEE
Confidence 875 7777765 68999999997542 2446678999999999999998652 123577788
Q ss_pred ecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh--cCCcEEEEe
Q psy7538 173 STAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME--LGMPCMILR 250 (543)
Q Consensus 173 ST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~--~~lp~~IlR 250 (543)
||..+.... | ....|+.||+..+.+.+.... .++.+..++
T Consensus 137 sS~~~~~~~----------~----------------------------~~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~ 178 (235)
T 3l77_A 137 TSDVSARLI----------P----------------------------YGGGYVSTKWAARALVRTFQIENPDVRFFELR 178 (235)
T ss_dssp CCGGGSSCC----------T----------------------------TCHHHHHHHHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred ecchhcccC----------C----------------------------CcchHHHHHHHHHHHHHHHhhcCCCeEEEEEe
Confidence 777443211 1 116899999999999987643 589999999
Q ss_pred cCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcc
Q psy7538 251 PSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLN 316 (543)
Q Consensus 251 ps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~ 316 (543)
|+.|-.+.....++ ......++..+|+|++++.++.....
T Consensus 179 PG~v~T~~~~~~~~--------------------------~~~~~~~~~p~dva~~v~~l~~~~~~ 218 (235)
T 3l77_A 179 PGAVDTYFGGSKPG--------------------------KPKEKGYLKPDEIAEAVRCLLKLPKD 218 (235)
T ss_dssp ECSBSSSTTTCCSC--------------------------CCGGGTCBCHHHHHHHHHHHHTSCTT
T ss_pred CCccccccccccCC--------------------------cccccCCCCHHHHHHHHHHHHcCCCC
Confidence 99875543211110 11112568899999999998877653
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.4e-16 Score=154.61 Aligned_cols=202 Identities=10% Similarity=0.042 Sum_probs=145.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
.++|+|+||||+|+||++++++|++.|+ +|+++.|+.... .....++.+|+
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~--------------------------~~~~~~~~~D~ 55 (241)
T 1dhr_A 5 GEARRVLVYGGRGALGSRCVQAFRARNW---WVASIDVVENEE--------------------------ASASVIVKMTD 55 (241)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHTTTC---EEEEEESSCCTT--------------------------SSEEEECCCCS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCC---EEEEEeCChhhc--------------------------cCCcEEEEcCC
Confidence 3689999999999999999999999986 789999976431 12456788999
Q ss_pred CCCCCCCCHHHHHHHhc---------CccEEEEcCccCCC--------cccHHHHHHHHHHHHHHHHHHHHhc-cCCceE
Q psy7538 108 TQLKLGISEIDKKELID---------NVDIVYHVAATIRF--------DEPIKTAVILNTRGTRDMLELSKQM-KNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~---------~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~ 169 (543)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... ..-.++
T Consensus 56 ~~~~------~v~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~i 129 (241)
T 1dhr_A 56 SFTE------QADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLL 129 (241)
T ss_dssp CHHH------HHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEE
T ss_pred CCHH------HHHHHHHHHHHHhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEE
Confidence 9865 5655554 79999999996531 1345668999999999999998763 112599
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh------cC
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME------LG 243 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~------~~ 243 (543)
|++||..+..... + ...|+.||+..+.+.+..+. .+
T Consensus 130 v~isS~~~~~~~~---------~-----------------------------~~~Y~asK~a~~~~~~~la~e~~~~~~g 171 (241)
T 1dhr_A 130 TLAGAKAALDGTP---------G-----------------------------MIGYGMAKGAVHQLCQSLAGKNSGMPSG 171 (241)
T ss_dssp EEECCGGGGSCCT---------T-----------------------------BHHHHHHHHHHHHHHHHHTSTTSSCCTT
T ss_pred EEECCHHHccCCC---------C-----------------------------chHHHHHHHHHHHHHHHHHHHhccCCCC
Confidence 9999986653211 0 16899999999999987654 25
Q ss_pred CcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCC
Q psy7538 244 MPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERK 323 (543)
Q Consensus 244 lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~ 323 (543)
+.+.+++|+.|-.+. ....... ......++.+|+|++++.++..... ...|
T Consensus 172 i~v~~v~PG~v~T~~-----------------~~~~~~~---------~~~~~~~~~~~vA~~v~~l~~~~~~---~~~G 222 (241)
T 1dhr_A 172 AAAIAVLPVTLDTPM-----------------NRKSMPE---------ADFSSWTPLEFLVETFHDWITGNKR---PNSG 222 (241)
T ss_dssp CEEEEEEESCEECHH-----------------HHHHSTT---------SCGGGSEEHHHHHHHHHHHHTTTTC---CCTT
T ss_pred eEEEEEecCcccCcc-----------------ccccCcc---------hhhccCCCHHHHHHHHHHHhcCCCc---Cccc
Confidence 899999999774431 1111110 1123467889999999888755432 1357
Q ss_pred cEEEeecC
Q psy7538 324 SVCNLTSN 331 (543)
Q Consensus 324 ~vyni~s~ 331 (543)
+.+++.++
T Consensus 223 ~~~~v~g~ 230 (241)
T 1dhr_A 223 SLIQVVTT 230 (241)
T ss_dssp CEEEEEEE
T ss_pred eEEEEeCC
Confidence 88888765
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.6e-16 Score=157.45 Aligned_cols=225 Identities=14% Similarity=0.110 Sum_probs=152.4
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
-++||+++||||+|+||++++++|++.|. +|+++.|+.... ++-.+++ .....++.++.+|
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~~--~~~~~~~--------------~~~~~~~~~~~~D 90 (275)
T 4imr_A 30 GLRGRTALVTGSSRGIGAAIAEGLAGAGA---HVILHGVKPGST--AAVQQRI--------------IASGGTAQELAGD 90 (275)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSTTTT--HHHHHHH--------------HHTTCCEEEEECC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEcCCHHHH--HHHHHHH--------------HhcCCeEEEEEec
Confidence 36899999999999999999999999987 889999976432 1111111 1123578899999
Q ss_pred CCCCCCCCCHHHHHHHhc------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 107 ITQLKLGISEIDKKELID------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .+..++|
T Consensus 91 v~~~~------~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv 164 (275)
T 4imr_A 91 LSEAG------AGTDLIERAEAIAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVV 164 (275)
T ss_dssp TTSTT------HHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCCHH------HHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 99987 5665554 78999999996432 2446678999999999999988431 2457999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... ....|+.||+..+.+.+..+. .++.+
T Consensus 165 ~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~v 206 (275)
T 4imr_A 165 SIGSINQLRPKS--------------------------------------VVTAYAATKAAQHNLIQSQARDFAGDNVLL 206 (275)
T ss_dssp EECCGGGTSCCT--------------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred EECCHHhCCCCC--------------------------------------CchhhHHHHHHHHHHHHHHHHHhcccCcEE
Confidence 999986643111 015799999999998877655 48999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
..++|+.|..+....... ..+ .......... ....-+...+|+|++++.++..... -..|+++
T Consensus 207 n~v~PG~v~T~~~~~~~~-----~~~-~~~~~~~~~~--------~p~~r~~~pedvA~~v~fL~s~~a~---~itG~~i 269 (275)
T 4imr_A 207 NTLAPGLVDTDRNADRRA-----QDP-EGWDEYVRTL--------NWMGRAGRPEEMVGAALFLASEACS---FMTGETI 269 (275)
T ss_dssp EEEEESSBCSHHHHHHHH-----HCH-HHHHHHHHHH--------STTCSCBCGGGGHHHHHHHHSGGGT---TCCSCEE
T ss_pred EEEEeccccCcccccccc-----cCh-HHHHHHHhhc--------CccCCCcCHHHHHHHHHHHcCcccC---CCCCCEE
Confidence 999999886542110000 000 0111111100 0112345688999999888765432 1358888
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
++.+|
T Consensus 270 ~vdGG 274 (275)
T 4imr_A 270 FLTGG 274 (275)
T ss_dssp EESSC
T ss_pred EeCCC
Confidence 88765
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.72 E-value=1e-16 Score=158.65 Aligned_cols=204 Identities=14% Similarity=0.101 Sum_probs=137.5
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+.+|+++||||+|+||++++++|++.|. +|+++.|+. +++++..+ ....++.++.+|+
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~------~~~~~~~~-------------~~~~~~~~~~~Dv 83 (272)
T 4dyv_A 26 TGKKIAIVTGAGSGVGRAVAVALAGAGY---GVALAGRRL------DALQETAA-------------EIGDDALCVPTDV 83 (272)
T ss_dssp --CCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHHH-------------HHTSCCEEEECCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHHH-------------HhCCCeEEEEecC
Confidence 5789999999999999999999999986 788888863 33332211 1124688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC--------cccHHHHHHHHHHHHHHHHHHHHhc---cC--Cc
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF--------DEPIKTAVILNTRGTRDMLELSKQM---KN--LK 167 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~--l~ 167 (543)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++.+++... .+ -.
T Consensus 84 ~d~~------~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g 157 (272)
T 4dyv_A 84 TDPD------SVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGG 157 (272)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCc
Confidence 9875 6666665 79999999997532 2345678999999998888877542 11 36
Q ss_pred eEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cC
Q psy7538 168 CFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LG 243 (543)
Q Consensus 168 ~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~ 243 (543)
++|++||..+..... ....|+.||+..+.+.+..+. .+
T Consensus 158 ~IV~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~g 199 (272)
T 4dyv_A 158 RIINNGSISATSPRP--------------------------------------YSAPYTATKHAITGLTKSTSLDGRVHD 199 (272)
T ss_dssp EEEEECCSSTTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred EEEEECchhhcCCCC--------------------------------------CchHHHHHHHHHHHHHHHHHHHhCccC
Confidence 999999986653211 016899999999999877654 58
Q ss_pred CcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcc
Q psy7538 244 MPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLN 316 (543)
Q Consensus 244 lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~ 316 (543)
+.+..++|+.|..+..+..+ .+.... ........+..++|+|++++.++..+..
T Consensus 200 I~vn~v~PG~v~T~~~~~~~-----------------~~~~~~--~~~~~~~~~~~pedvA~~v~fL~s~~~~ 253 (272)
T 4dyv_A 200 IACGQIDIGNADTPMAQKMK-----------------AGVPQA--DLSIKVEPVMDVAHVASAVVYMASLPLD 253 (272)
T ss_dssp EEEEEEEEEECC-------------------------------------------CHHHHHHHHHHHHHSCTT
T ss_pred EEEEEEEECcccChhhhhhc-----------------ccchhh--hhcccccCCCCHHHHHHHHHHHhCCCCc
Confidence 99999999988765332110 000000 0011223478899999999999876654
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.72 E-value=7.1e-17 Score=159.28 Aligned_cols=235 Identities=12% Similarity=0.091 Sum_probs=154.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||+|+||++++++|++.|. +|+++.|+. +++++. .+.+.... ....+..+.+|+
T Consensus 8 l~~k~~lVTGas~gIG~aia~~l~~~G~---~V~~~~r~~------~~~~~~-----~~~l~~~~---~~~~~~~~~~D~ 70 (267)
T 3t4x_A 8 LKGKTALVTGSTAGIGKAIATSLVAEGA---NVLINGRRE------ENVNET-----IKEIRAQY---PDAILQPVVADL 70 (267)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSH------HHHHHH-----HHHHHHHC---TTCEEEEEECCT
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHH-----HHHHHhhC---CCceEEEEecCC
Confidence 5789999999999999999999999987 788998874 222221 11222211 124678899999
Q ss_pred CCCCCCCCHHHHHHHhc---CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEEEEec
Q psy7538 108 TQLKLGISEIDKKELID---NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFTYIST 174 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~---~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~vST 174 (543)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++.+++... .+..++|++||
T Consensus 71 ~~~~------~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS 144 (267)
T 3t4x_A 71 GTEQ------GCQDVIEKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIAS 144 (267)
T ss_dssp TSHH------HHHHHHHHCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECC
T ss_pred CCHH------HHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcc
Confidence 9875 5666665 79999999997542 2445667999999988777666431 24579999999
Q ss_pred CccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEEEe
Q psy7538 175 AYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMILR 250 (543)
Q Consensus 175 ~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~IlR 250 (543)
..+..... ....|+.||+..+.+.+..+. +++.+..++
T Consensus 145 ~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~ 186 (267)
T 3t4x_A 145 EAAIMPSQ--------------------------------------EMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIM 186 (267)
T ss_dssp GGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEE
T ss_pred hhhccCCC--------------------------------------cchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEe
Confidence 86643211 016899999999999987765 478999999
Q ss_pred cCeeeecCCCCCC-CCCCCC-CchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEe
Q psy7538 251 PSIVVPIYKEPLP-GWTDNI-NGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNL 328 (543)
Q Consensus 251 ps~V~G~~~~p~~-gw~d~~-~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni 328 (543)
|+.|..+..+... ....+. ..+........... ........+..++|+|++++.++..... -..|+++++
T Consensus 187 PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~r~~~pedvA~~v~fL~s~~~~---~itG~~i~v 258 (267)
T 3t4x_A 187 PGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKEN-----RPTSIIQRLIRPEEIAHLVTFLSSPLSS---AINGSALRI 258 (267)
T ss_dssp ECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHH-----CTTCSSCSCBCTHHHHHHHHHHHSGGGT---TCCSCEEEE
T ss_pred CCeecCccHHHHHhhcCcccCCCHHHHHHHHhhcc-----CCcccccCccCHHHHHHHHHHHcCcccc---CccCCeEEE
Confidence 9988664211000 000000 00011111111100 0011234688999999999888765432 135889999
Q ss_pred ecC
Q psy7538 329 TSN 331 (543)
Q Consensus 329 ~s~ 331 (543)
.+|
T Consensus 259 dGG 261 (267)
T 3t4x_A 259 DGG 261 (267)
T ss_dssp STT
T ss_pred CCC
Confidence 887
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=3.7e-16 Score=152.45 Aligned_cols=213 Identities=15% Similarity=0.157 Sum_probs=143.1
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+++||||+|+||++++++|++.|+ +|+++.|+. ++++++.+ + ...++.++.+|++++
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~------~~~~~~~~---------~----~~~~~~~~~~Dv~~~ 58 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGH---KVIATGRRQ------ERLQELKD---------E----LGDNLYIAQLDVRNR 58 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTC---EEEEEESCH------HHHHHHHH---------H----HCTTEEEEECCTTCH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHHH---------H----hcCceEEEEcCCCCH
Confidence 6899999999999999999999986 788888864 23322210 0 113688999999987
Q ss_pred CCCCCHHHHHHHhc-------CccEEEEcCccCC----C----cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEEEE
Q psy7538 111 KLGISEIDKKELID-------NVDIVYHVAATIR----F----DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFTYI 172 (543)
Q Consensus 111 ~lgls~~~~~~l~~-------~vd~ViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~v 172 (543)
+ +++.+++ ++|++||+||... + .+.++..+++|+.|+.++++++... .+..++|++
T Consensus 59 ~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~i 132 (248)
T 3asu_A 59 A------AIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINI 132 (248)
T ss_dssp H------HHHHHHHTSCTTTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred H------HHHHHHHHHHHhCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 5 6777765 5899999999652 1 2346678999999999998887631 256799999
Q ss_pred ecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEE
Q psy7538 173 STAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMI 248 (543)
Q Consensus 173 ST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~I 248 (543)
||..+..... + ...|+.||+..+.+.+..+. .|+.+.+
T Consensus 133 sS~~~~~~~~---------~-----------------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~ 174 (248)
T 3asu_A 133 GSTAGSWPYA---------G-----------------------------GNVYGATKAFVRQFSLNLRTDLHGTAVRVTD 174 (248)
T ss_dssp CCGGGTSCCT---------T-----------------------------CHHHHHHHHHHHHHHHHHHHHTTTSCCEEEE
T ss_pred ccchhccCCC---------C-----------------------------CchHHHHHHHHHHHHHHHHHHhhhcCcEEEE
Confidence 9986643211 0 16899999999999887654 5899999
Q ss_pred EecCeeeec-CCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEE
Q psy7538 249 LRPSIVVPI-YKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCN 327 (543)
Q Consensus 249 lRps~V~G~-~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyn 327 (543)
++|+.|.|+ .... ...+..... .... .....+..+|+|++++.++..... ..+....
T Consensus 175 v~PG~v~gT~~~~~------~~~~~~~~~--------~~~~----~~~~~~~p~dvA~~v~~l~s~~~~----~~g~~i~ 232 (248)
T 3asu_A 175 IEPGLVGGTEFSNV------RFKGDDGKA--------EKTY----QNTVALTPEDVSEAVWWVSTLPAH----VNINTLE 232 (248)
T ss_dssp EEECSBCC----------------------------------------CCBCHHHHHHHHHHHHHSCTT----CCCCEEE
T ss_pred EeccccccCcchhh------cccCchHHH--------HHHH----hccCCCCHHHHHHHHHHHhcCCcc----ceeeEEE
Confidence 999999743 2110 000000000 0000 011235899999999988875432 2455666
Q ss_pred eecC
Q psy7538 328 LTSN 331 (543)
Q Consensus 328 i~s~ 331 (543)
+...
T Consensus 233 v~~~ 236 (248)
T 3asu_A 233 MMPV 236 (248)
T ss_dssp ECCT
T ss_pred Eccc
Confidence 5543
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=3.7e-16 Score=154.00 Aligned_cols=233 Identities=11% Similarity=0.035 Sum_probs=154.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|+||++++++|++.|. +|+++.|+. +++++. .+.+... ....++.++.+|+
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~---~V~~~~r~~------~~~~~~-----~~~l~~~---~~~~~~~~~~~Dv 68 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGA---AVAFCARDG------ERLRAA-----ESALRQR---FPGARLFASVCDV 68 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHH-----HHHHHHH---STTCCEEEEECCT
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHH-----HHHHHHh---cCCceEEEEeCCC
Confidence 5789999999999999999999999987 788998864 222221 1112211 1123588999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .+-.++|
T Consensus 69 ~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv 142 (265)
T 3lf2_A 69 LDAL------QVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIV 142 (265)
T ss_dssp TCHH------HHHHHHHHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEE
Confidence 9875 5655553 68999999997532 2446778999999999999998542 2356899
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+...... ...|+.||+..+.+.+..+. +|+++
T Consensus 143 ~isS~~~~~~~~~--------------------------------------~~~Y~asKaa~~~l~~~la~e~~~~gi~v 184 (265)
T 3lf2_A 143 CVNSLLASQPEPH--------------------------------------MVATSAARAGVKNLVRSMAFEFAPKGVRV 184 (265)
T ss_dssp EEEEGGGTSCCTT--------------------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred EECCcccCCCCCC--------------------------------------chhhHHHHHHHHHHHHHHHHHhcccCeEE
Confidence 9999866432110 16899999999998877654 58999
Q ss_pred EEEecCeeeecCCCCCCCCC-CCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 247 MILRPSIVVPIYKEPLPGWT-DNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~-d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
..++|+.|.++......... +....+..+....... .......+...+|+|++++.++..... -..|++
T Consensus 185 n~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~p~~r~~~pedvA~~v~fL~s~~~~---~itG~~ 254 (265)
T 3lf2_A 185 NGILIGLVESGQWRRRFEAREERELDWAQWTAQLARN-------KQIPLGRLGKPIEAARAILFLASPLSA---YTTGSH 254 (265)
T ss_dssp EEEEECSBCCHHHHHHHTC------CHHHHHHHHHHH-------TTCTTCSCBCHHHHHHHHHHHHSGGGT---TCCSEE
T ss_pred EEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhc-------cCCCcCCCcCHHHHHHHHHHHhCchhc---CcCCCE
Confidence 99999988665321100000 0000011111111110 001223467899999999988865432 135889
Q ss_pred EEeecC
Q psy7538 326 CNLTSN 331 (543)
Q Consensus 326 yni~s~ 331 (543)
+++.+|
T Consensus 255 i~vdGG 260 (265)
T 3lf2_A 255 IDVSGG 260 (265)
T ss_dssp EEESSS
T ss_pred EEECCC
Confidence 998876
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.72 E-value=2.4e-16 Score=154.18 Aligned_cols=215 Identities=12% Similarity=0.120 Sum_probs=149.4
Q ss_pred hhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 26 KTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 26 ~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
..++||+++||||+|+||++++++|++.|. +|+++.|+. +++++. .+.+.... ..++.++.+
T Consensus 8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~------~~~~~~-----~~~~~~~~----~~~~~~~~~ 69 (252)
T 3f1l_A 8 DLLNDRIILVTGASDGIGREAAMTYARYGA---TVILLGRNE------EKLRQV-----ASHINEET----GRQPQWFIL 69 (252)
T ss_dssp TTTTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHH-----HHHHHHHH----SCCCEEEEC
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHH-----HHHHHhhc----CCCceEEEE
Confidence 457899999999999999999999999987 788998864 233222 11122111 236788999
Q ss_pred cC--CCCCCCCCHHHHHHHhc-------CccEEEEcCccCC----C----cccHHHHHHHHHHHHHHHHHHHHhc---cC
Q psy7538 106 DI--TQLKLGISEIDKKELID-------NVDIVYHVAATIR----F----DEPIKTAVILNTRGTRDMLELSKQM---KN 165 (543)
Q Consensus 106 Dl--~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~ 165 (543)
|+ ++++ +++.+++ .+|++||+||... + .+.++..+++|+.|+.++++++... .+
T Consensus 70 D~~~~~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~ 143 (252)
T 3f1l_A 70 DLLTCTSE------NCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSD 143 (252)
T ss_dssp CTTTCCHH------HHHHHHHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS
T ss_pred ecccCCHH------HHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCC
Confidence 99 6553 5555554 6899999999742 1 2345678999999999999988431 25
Q ss_pred CceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh---c
Q psy7538 166 LKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME---L 242 (543)
Q Consensus 166 l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~---~ 242 (543)
..++|++||..+..... ....|+.||+..+.+.+..+. .
T Consensus 144 ~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~l~~~la~e~~~ 185 (252)
T 3f1l_A 144 AGSLVFTSSSVGRQGRA--------------------------------------NWGAYAASKFATEGMMQVLADEYQQ 185 (252)
T ss_dssp SCEEEEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCEEEEECChhhccCCC--------------------------------------CCchhHHHHHHHHHHHHHHHHHhcC
Confidence 67999999986643211 016899999999999887766 2
Q ss_pred CCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCC
Q psy7538 243 GMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322 (543)
Q Consensus 243 ~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~ 322 (543)
.+.+..+.|+.|-.+ +....... .....+...+|+|++++.++..... -..
T Consensus 186 ~irvn~v~PG~v~t~-----------------~~~~~~~~---------~~~~~~~~p~dva~~~~~L~s~~~~---~it 236 (252)
T 3f1l_A 186 RLRVNCINPGGTRTA-----------------MRASAFPT---------EDPQKLKTPADIMPLYLWLMGDDSR---RKT 236 (252)
T ss_dssp TCEEEEEECCSBSSH-----------------HHHHHCTT---------CCGGGSBCTGGGHHHHHHHHSGGGT---TCC
T ss_pred CcEEEEEecCcccCc-----------------hhhhhCCc---------cchhccCCHHHHHHHHHHHcCcccc---CCC
Confidence 378888888766332 11111111 1123467789999999888765432 135
Q ss_pred CcEEEeecC
Q psy7538 323 KSVCNLTSN 331 (543)
Q Consensus 323 ~~vyni~s~ 331 (543)
|+++++.+|
T Consensus 237 G~~i~vdgG 245 (252)
T 3f1l_A 237 GMTFDAQPG 245 (252)
T ss_dssp SCEEESSCC
T ss_pred CCEEEeCCC
Confidence 889999887
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.72 E-value=3.2e-16 Score=153.14 Aligned_cols=223 Identities=13% Similarity=0.084 Sum_probs=151.8
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|+||++++++|++.|. +|+++.+.... ++++. .+.+. ....++.++.+|+
T Consensus 5 l~~k~vlITGas~gIG~~~a~~l~~~G~---~v~~~~~~~~~-----~~~~~-----~~~~~-----~~~~~~~~~~~D~ 66 (255)
T 3icc_A 5 LKGKVALVTGASRGIGRAIAKRLANDGA---LVAIHYGNRKE-----EAEET-----VYEIQ-----SNGGSAFSIGANL 66 (255)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCSH-----HHHHH-----HHHHH-----HTTCEEEEEECCT
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCC---eEEEEeCCchH-----HHHHH-----HHHHH-----hcCCceEEEecCc
Confidence 5789999999999999999999999986 77776544321 11111 11111 1235788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc-cCC
Q psy7538 108 TQLKLGISEIDKKELID-------------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM-KNL 166 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l 166 (543)
++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++++++... ++-
T Consensus 67 ~~~~------~~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 140 (255)
T 3icc_A 67 ESLH------GVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN 140 (255)
T ss_dssp TSHH------HHHHHHHHHHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE
T ss_pred CCHH------HHHHHHHHHHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCC
Confidence 9875 4554443 28999999997532 2345668999999999999998753 223
Q ss_pred ceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----c
Q psy7538 167 KCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----L 242 (543)
Q Consensus 167 ~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~ 242 (543)
.++|++||..+...... ...|+.||+..+.+.+..+. .
T Consensus 141 ~~iv~isS~~~~~~~~~--------------------------------------~~~Y~asKaa~~~~~~~la~e~~~~ 182 (255)
T 3icc_A 141 SRIINISSAATRISLPD--------------------------------------FIAYSMTKGAINTMTFTLAKQLGAR 182 (255)
T ss_dssp EEEEEECCGGGTSCCTT--------------------------------------BHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred CEEEEeCChhhccCCCC--------------------------------------cchhHHhHHHHHHHHHHHHHHHHhc
Confidence 58999999866432110 16899999999998877654 5
Q ss_pred CCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCC
Q psy7538 243 GMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322 (543)
Q Consensus 243 ~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~ 322 (543)
++.+..++|+.|..+..... ............ ......+..++|+|++++.++..... -..
T Consensus 183 gi~v~~v~PG~v~t~~~~~~-------~~~~~~~~~~~~---------~~~~~~~~~~~dva~~~~~l~s~~~~---~~t 243 (255)
T 3icc_A 183 GITVNAILPGFVKTDMNAEL-------LSDPMMKQYATT---------ISAFNRLGEVEDIADTAAFLASPDSR---WVT 243 (255)
T ss_dssp TCEEEEEEECCBCCSSSTTT-------TTSHHHHHHHHH---------TSTTSSCBCHHHHHHHHHHHHSGGGT---TCC
T ss_pred CeEEEEEEEeeecccchhhh-------cccHHHHHhhhc---------cCCcCCCCCHHHHHHHHHHHhCcccC---Ccc
Confidence 89999999999877644321 111111111111 11224567899999999887754432 135
Q ss_pred CcEEEeecC
Q psy7538 323 KSVCNLTSN 331 (543)
Q Consensus 323 ~~vyni~s~ 331 (543)
|+++++.+|
T Consensus 244 G~~i~vdgG 252 (255)
T 3icc_A 244 GQLIDVSGG 252 (255)
T ss_dssp SCEEEESSS
T ss_pred CCEEEecCC
Confidence 889999876
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.72 E-value=1.6e-16 Score=158.33 Aligned_cols=202 Identities=9% Similarity=0.115 Sum_probs=140.6
Q ss_pred hhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 26 KTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 26 ~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
..++||+|+||||+|+||++++++|++.|+ +|+++.|+. ++++++. +.++.. ...++.++.+
T Consensus 24 ~~~~~k~vlITGasggIG~~la~~l~~~G~---~V~~~~r~~------~~~~~~~-----~~~~~~----~~~~~~~~~~ 85 (286)
T 1xu9_A 24 EMLQGKKVIVTGASKGIGREMAYHLAKMGA---HVVVTARSK------ETLQKVV-----SHCLEL----GAASAHYIAG 85 (286)
T ss_dssp GGGTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH-----HHHHHH----TCSEEEEEEC
T ss_pred hhcCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHH-----HHHHHh----CCCceEEEeC
Confidence 347899999999999999999999999986 789999964 2332221 111111 1136889999
Q ss_pred cCCCCCCCCCHHHHHHHhc-------CccEEEEcC-ccCCC------cccHHHHHHHHHHHHHHHHHHHHhc--cCCceE
Q psy7538 106 DITQLKLGISEIDKKELID-------NVDIVYHVA-ATIRF------DEPIKTAVILNTRGTRDMLELSKQM--KNLKCF 169 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~-------~vd~ViH~A-A~v~~------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~l~~~ 169 (543)
|+++++ +++.+++ ++|+|||+| +.... .+.++..+++|+.|+.++++++... ++..++
T Consensus 86 Dl~d~~------~v~~~~~~~~~~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~i 159 (286)
T 1xu9_A 86 TMEDMT------FAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSI 159 (286)
T ss_dssp CTTCHH------HHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred CCCCHH------HHHHHHHHHHHHcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEE
Confidence 999875 5655554 799999994 54321 2345668999999999999888653 123699
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh------cC
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME------LG 243 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~------~~ 243 (543)
|++||..+..... + ...|+.||+..|.+.+.... .+
T Consensus 160 v~isS~~~~~~~~---------~-----------------------------~~~Y~asK~a~~~~~~~l~~e~~~~~~~ 201 (286)
T 1xu9_A 160 VVVSSLAGKVAYP---------M-----------------------------VAAYSASKFALDGFFSSIRKEYSVSRVN 201 (286)
T ss_dssp EEEEEGGGTSCCT---------T-----------------------------CHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred EEECCcccccCCC---------C-----------------------------ccHHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 9999986643211 0 16899999999988866443 37
Q ss_pred CcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhc
Q psy7538 244 MPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFL 315 (543)
Q Consensus 244 lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~ 315 (543)
+.+++++|+.|..+ +......+ ......++.+|+|++++.++....
T Consensus 202 i~v~~v~Pg~v~t~-----------------~~~~~~~~---------~~~~~~~~~~~vA~~i~~~~~~~~ 247 (286)
T 1xu9_A 202 VSITLCVLGLIDTE-----------------TAMKAVSG---------IVHMQAAPKEECALEIIKGGALRQ 247 (286)
T ss_dssp CEEEEEEECCBCCH-----------------HHHHHSCG---------GGGGGCBCHHHHHHHHHHHHHTTC
T ss_pred eEEEEeecCccCCh-----------------hHHHhccc---------cccCCCCCHHHHHHHHHHHHhcCC
Confidence 99999999876433 11111111 122456899999999998886543
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.71 E-value=8e-17 Score=156.74 Aligned_cols=211 Identities=18% Similarity=0.213 Sum_probs=130.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||||+|+||++++++|++ |. .|+++.|.. ++++++. . ..++.++.+|+
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~-g~---~v~~~~r~~------~~~~~~~--------------~-~~~~~~~~~D~ 57 (245)
T 3e9n_A 3 LKKKIAVVTGATGGMGIEIVKDLSR-DH---IVYALGRNP------EHLAALA--------------E-IEGVEPIESDI 57 (245)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHTT-TS---EEEEEESCH------HHHHHHH--------------T-STTEEEEECCH
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHhC-CC---eEEEEeCCH------HHHHHHH--------------h-hcCCcceeccc
Confidence 4689999999999999999999988 64 788888863 3333321 1 24688899999
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEEEEecCcc
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFTYISTAYC 177 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~vST~y~ 177 (543)
+++..--...+...-+.++|+|||+||.... .+.++..+++|+.|+.++.+++... .+ .++|++||..+
T Consensus 58 ~~~~~~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~ 136 (245)
T 3e9n_A 58 VKEVLEEGGVDKLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAG 136 (245)
T ss_dssp HHHHHTSSSCGGGTTCSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC----
T ss_pred chHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCccc
Confidence 8752100000011112369999999997542 1345668999999988888877431 13 68999999866
Q ss_pred ccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEEEecCe
Q psy7538 178 HPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMILRPSI 253 (543)
Q Consensus 178 ~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~IlRps~ 253 (543)
..... ....|+.||+..|.+.+..+. .|+.+.+++|+.
T Consensus 137 ~~~~~--------------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~ 178 (245)
T 3e9n_A 137 NGPHP--------------------------------------GNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGP 178 (245)
T ss_dssp --------------------------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECC
T ss_pred ccCCC--------------------------------------CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCC
Confidence 43211 016899999999999887654 589999999998
Q ss_pred eeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeec
Q psy7538 254 VVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTS 330 (543)
Q Consensus 254 V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s 330 (543)
|.++..... .... +.......++.++|+|++++.++..... +.+||+.-
T Consensus 179 v~t~~~~~~-------------~~~~---------~~~~~~~~~~~p~dvA~~i~~l~~~~~~------~~~~~i~~ 227 (245)
T 3e9n_A 179 TNTPMLQGL-------------MDSQ---------GTNFRPEIYIEPKEIANAIRFVIDAGET------TQITNVDV 227 (245)
T ss_dssp C--------------------------------------CCGGGSCHHHHHHHHHHHHTSCTT------EEEEEEEE
T ss_pred ccCchhhhh-------------hhhh---------hcccccccCCCHHHHHHHHHHHHcCCCc------cceeeeEE
Confidence 877532210 0000 0111224578899999999999876554 67888763
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.71 E-value=2.1e-16 Score=152.98 Aligned_cols=195 Identities=15% Similarity=0.129 Sum_probs=137.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|+||++++++|++.|. +|+++.|+. ++++++.+ .+ ..++.++.+|+
T Consensus 1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~---~V~~~~r~~------~~~~~~~~-----~~--------~~~~~~~~~D~ 58 (235)
T 3l6e_A 1 MSLGHIIVTGAGSGLGRALTIGLVERGH---QVSMMGRRY------QRLQQQEL-----LL--------GNAVIGIVADL 58 (235)
T ss_dssp --CCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHHH-----HH--------GGGEEEEECCT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHHH-----Hh--------cCCceEEECCC
Confidence 3578999999999999999999999986 789999964 33332211 01 12588999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc--cCCceEEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM--KNLKCFTY 171 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~l~~~V~ 171 (543)
++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++++++... .+-.++|+
T Consensus 59 ~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~ 132 (235)
T 3l6e_A 59 AHHE------DVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLAN 132 (235)
T ss_dssp TSHH------HHHHHHHHHHHHHCSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred CCHH------HHHHHHHHHHHhcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEE
Confidence 9875 6666554 68999999997532 2456778999999999999888542 11139999
Q ss_pred EecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEE
Q psy7538 172 ISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCM 247 (543)
Q Consensus 172 vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~ 247 (543)
+||..+...... ...|+.||+..+.+.+..+. .|+.+.
T Consensus 133 isS~~~~~~~~~--------------------------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~ 174 (235)
T 3l6e_A 133 VLSSAAQVGKAN--------------------------------------ESLYCASKWGMRGFLESLRAELKDSPLRLV 174 (235)
T ss_dssp ECCEECCSSCSS--------------------------------------HHHHHHHHHHHHHHHHHHHHHTTTSSEEEE
T ss_pred EeCHHhcCCCCC--------------------------------------CcHHHHHHHHHHHHHHHHHHHhhccCCEEE
Confidence 999865432110 06899999999999887665 579999
Q ss_pred EEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhc
Q psy7538 248 ILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFL 315 (543)
Q Consensus 248 IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~ 315 (543)
.++|+.|-.+.... . .. .....++..+|+|++++.++..+.
T Consensus 175 ~v~PG~v~T~~~~~-------~----------~~----------~~~~~~~~pedvA~~v~~l~~~~~ 215 (235)
T 3l6e_A 175 NLYPSGIRSEFWDN-------T----------DH----------VDPSGFMTPEDAAAYMLDALEARS 215 (235)
T ss_dssp EEEEEEECCCC--------------------------------------CBCHHHHHHHHHHHTCCCS
T ss_pred EEeCCCccCcchhc-------c----------CC----------CCCcCCCCHHHHHHHHHHHHhCCC
Confidence 99999885442110 0 00 011256889999999999886543
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.71 E-value=2.8e-16 Score=151.33 Aligned_cols=193 Identities=17% Similarity=0.191 Sum_probs=136.3
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|+||||+|+||++++++|++.|. +|+++.|+. ++++++. .....++.++.+|++++
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~---~V~~~~r~~------~~~~~~~-------------~~~~~~~~~~~~D~~~~ 59 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEGK---ATYLTGRSE------SKLSTVT-------------NCLSNNVGYRARDLASH 59 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTTC---CEEEEESCH------HHHHHHH-------------HTCSSCCCEEECCTTCH
T ss_pred CEEEEecCCchHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHH-------------HHHhhccCeEeecCCCH
Confidence 6899999999999999999999986 688999864 3333322 11235678899999987
Q ss_pred CCCCCHHHHHHHhcCc----cEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc--cCCceEEEEecCcc
Q psy7538 111 KLGISEIDKKELIDNV----DIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM--KNLKCFTYISTAYC 177 (543)
Q Consensus 111 ~lgls~~~~~~l~~~v----d~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~l~~~V~vST~y~ 177 (543)
+ +++.+++.+ |+|||+||.... .+.++..+++|+.|+.++++.+... ++-.++|++||..+
T Consensus 60 ~------~v~~~~~~~~~~~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~ 133 (230)
T 3guy_A 60 Q------EVEQLFEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAA 133 (230)
T ss_dssp H------HHHHHHHSCSSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGG
T ss_pred H------HHHHHHHHHhhcCCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeeccc
Confidence 5 788877654 899999996532 2445678999999999999988653 11238999999866
Q ss_pred ccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEEEecCe
Q psy7538 178 HPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMILRPSI 253 (543)
Q Consensus 178 ~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~IlRps~ 253 (543)
..... ....|+.||+..+.+.+..+. .++.+..++|+.
T Consensus 134 ~~~~~--------------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~ 175 (230)
T 3guy_A 134 QQPKA--------------------------------------QESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGG 175 (230)
T ss_dssp TSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECC
T ss_pred CCCCC--------------------------------------CCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCc
Confidence 43211 016899999999999887665 489999999997
Q ss_pred eeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhc
Q psy7538 254 VVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFL 315 (543)
Q Consensus 254 V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~ 315 (543)
|..+... .... ......+++++|+|++++.++..+.
T Consensus 176 v~t~~~~-----------------~~~~---------~~~~~~~~~~~dvA~~i~~l~~~~~ 211 (230)
T 3guy_A 176 MATEFWE-----------------TSGK---------SLDTSSFMSAEDAALMIHGALANIG 211 (230)
T ss_dssp C------------------------------------------CCCHHHHHHHHHHHCCEET
T ss_pred ccChHHH-----------------hcCC---------CCCcccCCCHHHHHHHHHHHHhCcC
Confidence 7554211 0000 1123467889999999998886543
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.71 E-value=8.2e-16 Score=153.17 Aligned_cols=219 Identities=15% Similarity=0.126 Sum_probs=149.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCC-HHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKT-PNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~-~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
+++|+++||||+|+||++++++|++.|. +|+++.|+..... ..+++++. .+.+. ....++.++.+|
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~~-----~~~~~-----~~~~~~~~~~~D 73 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVAADGA---NVALVAKSAEPHPKLPGTIYTA-----AKEIE-----EAGGQALPIVGD 73 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHTTTC---EEEEEESCCSCCSSSCCCHHHH-----HHHHH-----HHTSEEEEEECC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECChhhhhhhhHHHHHH-----HHHHH-----hcCCcEEEEECC
Confidence 5789999999999999999999999987 8999999865321 11111111 01111 123578999999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceE
Q psy7538 107 ITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCF 169 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~ 169 (543)
+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .+..++
T Consensus 74 v~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~i 147 (285)
T 3sc4_A 74 IRDGD------AVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHI 147 (285)
T ss_dssp TTSHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEE
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEE
Confidence 99875 6666655 79999999997532 2445678999999999999988653 134699
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+..... .....|+.||+..+.+.+..+. +|+.
T Consensus 148 v~isS~~~~~~~~-------------------------------------~~~~~Y~asKaal~~~~~~la~e~~~~gI~ 190 (285)
T 3sc4_A 148 LTLSPPIRLEPKW-------------------------------------LRPTPYMMAKYGMTLCALGIAEELRDAGIA 190 (285)
T ss_dssp EECCCCCCCSGGG-------------------------------------SCSHHHHHHHHHHHHHHHHHHHHTGGGTCE
T ss_pred EEECChhhccCCC-------------------------------------CCCchHHHHHHHHHHHHHHHHHHhcccCcE
Confidence 9999985532110 0116899999999999877654 5899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
+..++|+.+..+ .+........ .....+...+|+|++++.++..... ..++.
T Consensus 191 vn~v~PG~~v~t----------------~~~~~~~~~~--------~~~~r~~~pedvA~~~~~l~s~~~~----~tG~~ 242 (285)
T 3sc4_A 191 SNTLWPRTTVAT----------------AAVQNLLGGD--------EAMARSRKPEVYADAAYVVLNKPSS----YTGNT 242 (285)
T ss_dssp EEEEECSSCBCC----------------HHHHHHHTSC--------CCCTTCBCTHHHHHHHHHHHTSCTT----CCSCE
T ss_pred EEEEeCCCcccc----------------HHHHhhcccc--------ccccCCCCHHHHHHHHHHHhCCccc----ccceE
Confidence 999999832211 1222222111 1223456789999999888865432 24666
Q ss_pred EEeec
Q psy7538 326 CNLTS 330 (543)
Q Consensus 326 yni~s 330 (543)
+.+.+
T Consensus 243 i~~dg 247 (285)
T 3sc4_A 243 LLCED 247 (285)
T ss_dssp EEHHH
T ss_pred EEEcC
Confidence 65544
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=2.5e-16 Score=168.26 Aligned_cols=226 Identities=17% Similarity=0.201 Sum_probs=156.9
Q ss_pred hhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 26 KTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 26 ~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
.+-.+++|+||||||+||.+++++|++.|. .+|+++.|+.......+.+.+ .+ .....++.++.+
T Consensus 222 ~~~~~~~vLITGgtGgIG~~la~~La~~G~--~~vvl~~R~~~~~~~~~~l~~--------~l-----~~~g~~v~~~~~ 286 (486)
T 2fr1_A 222 EWKPTGTVLVTGGTGGVGGQIARWLARRGA--PHLLLVSRSGPDADGAGELVA--------EL-----EALGARTTVAAC 286 (486)
T ss_dssp CCCCCSEEEEETTTSHHHHHHHHHHHHHTC--SEEEEEESSGGGSTTHHHHHH--------HH-----HHTTCEEEEEEC
T ss_pred CcCCCCEEEEECCCCHHHHHHHHHHHHcCC--CEEEEEcCCCCCcHHHHHHHH--------HH-----HhcCCEEEEEEe
Confidence 466789999999999999999999999986 368899998643222222211 11 112357899999
Q ss_pred cCCCCCCCCCHHHHHHHhcCc------cEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEE
Q psy7538 106 DITQLKLGISEIDKKELIDNV------DIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYI 172 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~~v------d~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~v 172 (543)
|+++++ ++..+++++ |+|||+||.... .+.++..+++|+.|+.++.++++.. ++++||++
T Consensus 287 Dv~d~~------~v~~~~~~i~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-~~~~~V~~ 359 (486)
T 2fr1_A 287 DVTDRE------SVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL-DLTAFVLF 359 (486)
T ss_dssp CTTCHH------HHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-CCSEEEEE
T ss_pred CCCCHH------HHHHHHHHHHhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC-CCCEEEEE
Confidence 999875 788887764 999999997643 2345667889999999999999987 78999999
Q ss_pred ecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecC
Q psy7538 173 STAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPS 252 (543)
Q Consensus 173 ST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps 252 (543)
||..+..... ....|+.+|...+.+..+....|+++++++|+
T Consensus 360 SS~a~~~g~~--------------------------------------g~~~Yaaaka~l~~la~~~~~~gi~v~~i~pG 401 (486)
T 2fr1_A 360 SSFASAFGAP--------------------------------------GLGGYAPGNAYLDGLAQQRRSDGLPATAVAWG 401 (486)
T ss_dssp EEHHHHTCCT--------------------------------------TCTTTHHHHHHHHHHHHHHHHTTCCCEEEEEC
T ss_pred cChHhcCCCC--------------------------------------CCHHHHHHHHHHHHHHHHHHhcCCeEEEEECC
Confidence 9985432111 01689999999998877665569999999999
Q ss_pred eeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCC
Q psy7538 253 IVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNK 332 (543)
Q Consensus 253 ~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~ 332 (543)
.+.+... ...... .. . .......++.+++++++..++..... .+.+.
T Consensus 402 ~~~~~gm----------------~~~~~~---~~-~--~~~g~~~i~~e~~a~~l~~~l~~~~~--------~~~v~--- 448 (486)
T 2fr1_A 402 TWAGSGM----------------AEGPVA---DR-F--RRHGVIEMPPETACRALQNALDRAEV--------CPIVI--- 448 (486)
T ss_dssp CBC--------------------------------C--TTTTEECBCHHHHHHHHHHHHHTTCS--------SCEEC---
T ss_pred eeCCCcc----------------cchhHH---HH-H--HhcCCCCCCHHHHHHHHHHHHhCCCC--------eEEEE---
Confidence 7755411 000000 00 0 11234678999999999998875432 12222
Q ss_pred CCcccHHHHHHHHh
Q psy7538 333 DYKITWQEICDIGK 346 (543)
Q Consensus 333 ~~~~t~~e~~~~i~ 346 (543)
++.|..+.....
T Consensus 449 --~~d~~~~~~~~~ 460 (486)
T 2fr1_A 449 --DVRWDRFLLAYT 460 (486)
T ss_dssp --EECHHHHHHHHT
T ss_pred --eCCHHHHhhhhc
Confidence 367877766543
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.70 E-value=5.8e-16 Score=166.18 Aligned_cols=227 Identities=15% Similarity=0.196 Sum_probs=158.7
Q ss_pred hhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHH-HHHhcCchhHHHHhhcCcCCCCceEEEE
Q psy7538 26 KTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRV-EELFESPVFDALKTLRGKSILQKIQVIS 104 (543)
Q Consensus 26 ~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl-~~~~~~~~f~~l~~~~~~~~~~~v~~i~ 104 (543)
.+-.+++|+||||||+||.+++++|++.|. .+|+++.|+.......+.+ +++ .....++.++.
T Consensus 255 ~~~~~~~vLITGgtGgIG~~lA~~La~~G~--~~vvl~~R~~~~~~~~~~l~~~l--------------~~~g~~v~~~~ 318 (511)
T 2z5l_A 255 SWQPSGTVLITGGMGAIGRRLARRLAAEGA--ERLVLTSRRGPEAPGAAELAEEL--------------RGHGCEVVHAA 318 (511)
T ss_dssp CCCCCSEEEEETTTSHHHHHHHHHHHHTTC--SEEEEEESSGGGSTTHHHHHHHH--------------HTTTCEEEEEE
T ss_pred CcCCCCEEEEECCCCHHHHHHHHHHHhCCC--cEEEEEecCCcccHHHHHHHHHH--------------HhcCCEEEEEE
Confidence 356789999999999999999999999876 3688899976432212222 222 22235789999
Q ss_pred ccCCCCCCCCCHHHHHHHhcC--ccEEEEcCccCCCc-------ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecC
Q psy7538 105 GDITQLKLGISEIDKKELIDN--VDIVYHVAATIRFD-------EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTA 175 (543)
Q Consensus 105 gDl~~~~lgls~~~~~~l~~~--vd~ViH~AA~v~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~ 175 (543)
+|+++++ +++.++++ +|+|||+||..... +.++..+++|+.|+.++.+++..++++++||++||.
T Consensus 319 ~Dvtd~~------~v~~~~~~~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~ 392 (511)
T 2z5l_A 319 CDVAERD------ALAALVTAYPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSV 392 (511)
T ss_dssp CCSSCHH------HHHHHHHHSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEG
T ss_pred eCCCCHH------HHHHHHhcCCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCH
Confidence 9999875 78888865 99999999976532 345668899999999999998876467899999998
Q ss_pred ccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeee
Q psy7538 176 YCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVV 255 (543)
Q Consensus 176 y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~ 255 (543)
.+...... ...|+.+|+..|.+.......|+++++++|+.+.
T Consensus 393 a~~~g~~g--------------------------------------~~~YaaaKa~ld~la~~~~~~gi~v~sv~pG~~~ 434 (511)
T 2z5l_A 393 TGTWGNAG--------------------------------------QGAYAAANAALDALAERRRAAGLPATSVAWGLWG 434 (511)
T ss_dssp GGTTCCTT--------------------------------------BHHHHHHHHHHHHHHHHHHTTTCCCEEEEECCBC
T ss_pred HhcCCCCC--------------------------------------CHHHHHHHHHHHHHHHHHHHcCCcEEEEECCccc
Confidence 54321110 1689999999999988765579999999998763
Q ss_pred ecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCc
Q psy7538 256 PIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYK 335 (543)
Q Consensus 256 G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~ 335 (543)
.+ | +..... ..... ......++.+++++++..++..... .+.+. .
T Consensus 435 ~t------g----m~~~~~-~~~~~-----------~~g~~~l~~e~~a~~l~~al~~~~~--------~v~v~-----~ 479 (511)
T 2z5l_A 435 GG------G----MAAGAG-EESLS-----------RRGLRAMDPDAAVDALLGAMGRNDV--------CVTVV-----D 479 (511)
T ss_dssp ST------T----CCCCHH-HHHHH-----------HHTBCCBCHHHHHHHHHHHHHHTCS--------EEEEC-----C
T ss_pred CC------c----cccccc-HHHHH-----------hcCCCCCCHHHHHHHHHHHHhCCCC--------EEEEE-----e
Confidence 22 1 111110 01111 1123468899999999998866432 23332 2
Q ss_pred ccHHHHHHHHhh
Q psy7538 336 ITWQEICDIGKD 347 (543)
Q Consensus 336 ~t~~e~~~~i~~ 347 (543)
+.|..+......
T Consensus 480 ~d~~~~~~~~~~ 491 (511)
T 2z5l_A 480 VDWERFAPATNA 491 (511)
T ss_dssp BCHHHHHHHHHH
T ss_pred CCHHHHHhhhcc
Confidence 567777665543
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.70 E-value=3.8e-16 Score=153.83 Aligned_cols=207 Identities=14% Similarity=0.092 Sum_probs=139.4
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|+||++++++|++.|. +|+++.|+. ++++++. +.++ ....++.++.+|+
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~------~~~~~~~-----~~l~-----~~~~~~~~~~~Dv 62 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAGA---KILLGARRQ------ARIEAIA-----TEIR-----DAGGTALAQVLDV 62 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESSH------HHHHHHH-----HHHH-----HTTCEEEEEECCT
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHH-----HHHH-----hcCCcEEEEEcCC
Confidence 3689999999999999999999999986 788888874 2332221 1111 1235788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++.+++... .+-.++|
T Consensus 63 ~d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV 136 (264)
T 3tfo_A 63 TDRH------SVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQII 136 (264)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEE
Confidence 9875 5666554 68999999997643 2446678999999999888877542 2457999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh--cCCcEEE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME--LGMPCMI 248 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~--~~lp~~I 248 (543)
++||..+..... ....|+.||+..+.+.+..+. .++.+..
T Consensus 137 ~isS~~~~~~~~--------------------------------------~~~~Y~asKaal~~l~~~la~e~~gIrvn~ 178 (264)
T 3tfo_A 137 NIGSIGALSVVP--------------------------------------TAAVYCATKFAVRAISDGLRQESTNIRVTC 178 (264)
T ss_dssp EECCGGGTCCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHCSSEEEEE
T ss_pred EEcCHHHcccCC--------------------------------------CChhHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 999986643211 015899999999999887765 4889999
Q ss_pred EecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcc
Q psy7538 249 LRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLN 316 (543)
Q Consensus 249 lRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~ 316 (543)
++||.|..+...... .. .. ... .. ....-....+|+|++++.++.....
T Consensus 179 v~PG~v~T~~~~~~~-------~~-~~-----~~~----~~--~~~~~~~~pedvA~~v~~l~s~~~~ 227 (264)
T 3tfo_A 179 VNPGVVESELAGTIT-------HE-ET-----MAA----MD--TYRAIALQPADIARAVRQVIEAPQS 227 (264)
T ss_dssp EEECCC------------------------------------------CCCHHHHHHHHHHHHHSCTT
T ss_pred EecCCCcCccccccc-------ch-hH-----HHH----HH--hhhccCCCHHHHHHHHHHHhcCCcc
Confidence 999988654321100 00 00 000 00 0011136899999999998876543
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.70 E-value=5.2e-16 Score=151.57 Aligned_cols=202 Identities=18% Similarity=0.185 Sum_probs=139.9
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|+||++++++|++.|. +|+++.|+. +++++.. +.+.... ....++.++.+|+
T Consensus 5 ~~~k~~lVTGas~GIG~aia~~l~~~G~---~V~~~~r~~------~~~~~~~-----~~~~~~~--~~~~~~~~~~~Dv 68 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVIAAGLATDGY---RVVLIARSK------QNLEKVH-----DEIMRSN--KHVQEPIVLPLDI 68 (250)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHHTC---EEEEEESCH------HHHHHHH-----HHHHHHC--TTSCCCEEEECCT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHH-----HHHHHhc--cccCcceEEeccC
Confidence 5789999999999999999999999986 889999874 2222211 1122111 1125788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC---c---ccHHHHHHHHHHHHHHHHHHHHhc---cCCceEEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF---D---EPIKTAVILNTRGTRDMLELSKQM---KNLKCFTY 171 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~---~---~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~ 171 (543)
++++ +++.+++ .+|++||+||.... + +.++..+++|+.|+.++++++... .+..++|+
T Consensus 69 ~~~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~ 142 (250)
T 3nyw_A 69 TDCT------KADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFN 142 (250)
T ss_dssp TCHH------HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE
Confidence 9875 5665554 68999999997532 2 445678999999999999888431 24579999
Q ss_pred EecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEE
Q psy7538 172 ISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCM 247 (543)
Q Consensus 172 vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~ 247 (543)
+||..+..... + ...|+.||+..+.+.+..+. .|+++.
T Consensus 143 isS~~~~~~~~---------~-----------------------------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn 184 (250)
T 3nyw_A 143 VASRAAKYGFA---------D-----------------------------GGIYGSTKFALLGLAESLYRELAPLGIRVT 184 (250)
T ss_dssp ECC-------C---------C-----------------------------TTHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred EccHHhcCCCC---------C-----------------------------CcchHHHHHHHHHHHHHHHHHhhhcCcEEE
Confidence 99986542110 0 16899999999988877654 589999
Q ss_pred EEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhc
Q psy7538 248 ILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFL 315 (543)
Q Consensus 248 IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~ 315 (543)
.++|+.|..+ +...... ......+++.+|+|++++.++....
T Consensus 185 ~v~PG~v~T~-----------------~~~~~~~---------~~~~~~~~~p~dva~~v~~l~s~~~ 226 (250)
T 3nyw_A 185 TLCPGWVNTD-----------------MAKKAGT---------PFKDEEMIQPDDLLNTIRCLLNLSE 226 (250)
T ss_dssp EEEESSBCSH-----------------HHHHTTC---------CSCGGGSBCHHHHHHHHHHHHTSCT
T ss_pred EEecCcccCc-----------------hhhhcCC---------CcccccCCCHHHHHHHHHHHHcCCC
Confidence 9999977443 1111111 1122457899999999998887544
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=3.7e-16 Score=152.31 Aligned_cols=207 Identities=13% Similarity=0.101 Sum_probs=142.9
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
.+++|+++||||+|+||++++++|++.|+ +|+++.|+. ++++++. +.++. ...++.++.+|
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~---~V~~~~r~~------~~~~~~~-----~~l~~-----~~~~~~~~~~D 64 (247)
T 2jah_A 4 ALQGKVALITGASSGIGEATARALAAEGA---AVAIAARRV------EKLRALG-----DELTA-----AGAKVHVLELD 64 (247)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH-----HHHHH-----TTCCEEEEECC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHH-----HHHHh-----cCCcEEEEECC
Confidence 36789999999999999999999999987 788998864 2332221 11211 12468899999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceE
Q psy7538 107 ITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCF 169 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~ 169 (543)
+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .+ .++
T Consensus 65 v~~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~i 137 (247)
T 2jah_A 65 VADRQ------GVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTV 137 (247)
T ss_dssp TTCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEE
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEE
Confidence 99875 6665554 79999999996532 2345678999999999999988642 24 799
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+..... ....|+.||+..+.+.+..+. +|++
T Consensus 138 v~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~ 179 (247)
T 2jah_A 138 VQMSSIAGRVNVR--------------------------------------NAAVYQATKFGVNAFSETLRQEVTERGVR 179 (247)
T ss_dssp EEECCGGGTCCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred EEEccHHhcCCCC--------------------------------------CCcHHHHHHHHHHHHHHHHHHHhcccCcE
Confidence 9999986643211 016899999998888776543 5899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhh
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDF 314 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~ 314 (543)
+.+++|+.|..+.... .... .. ....... + ....++..+|+|++++.++...
T Consensus 180 v~~v~PG~v~T~~~~~-------~~~~-~~-~~~~~~~-------~-~~~~~~~pedvA~~v~~l~s~~ 231 (247)
T 2jah_A 180 VVVIEPGTTDTELRGH-------ITHT-AT-KEMYEQR-------I-SQIRKLQAQDIAEAVRYAVTAP 231 (247)
T ss_dssp EEEEEECSBSSSGGGG-------CCCH-HH-HHHHHHH-------T-TTSCCBCHHHHHHHHHHHHHSC
T ss_pred EEEEECCCCCCcchhc-------ccch-hh-HHHHHhc-------c-cccCCCCHHHHHHHHHHHhCCC
Confidence 9999999886653211 0111 11 1111000 1 1112588999999999888654
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.69 E-value=3.3e-16 Score=155.74 Aligned_cols=209 Identities=12% Similarity=0.089 Sum_probs=138.9
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
.++||+++||||+|+||++++++|++.|. +|+++.|+. +++++.. +.+.... ...+.++.+|
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~------~~~~~~~-----~~~~~~~----~~~~~~~~~D 91 (281)
T 4dry_A 30 SGEGRIALVTGGGTGVGRGIAQALSAEGY---SVVITGRRP------DVLDAAA-----GEIGGRT----GNIVRAVVCD 91 (281)
T ss_dssp ----CEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH-----HHHHHHH----SSCEEEEECC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHH-----HHHHhcC----CCeEEEEEcC
Confidence 46889999999999999999999999986 789999864 2222211 1121111 1246899999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC--------cccHHHHHHHHHHHHHHHHHHHHhc----c-CC
Q psy7538 107 ITQLKLGISEIDKKELID-------NVDIVYHVAATIRF--------DEPIKTAVILNTRGTRDMLELSKQM----K-NL 166 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~----~-~l 166 (543)
+++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.++.+++... + +-
T Consensus 92 v~d~~------~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~ 165 (281)
T 4dry_A 92 VGDPD------QVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRG 165 (281)
T ss_dssp TTCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCC
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCC
Confidence 99875 6666554 67999999997532 2456678999999988888877542 1 14
Q ss_pred ceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----c
Q psy7538 167 KCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----L 242 (543)
Q Consensus 167 ~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~ 242 (543)
.++|++||..+..... ....|+.||+..+.+.+..+. +
T Consensus 166 g~IV~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~ 207 (281)
T 4dry_A 166 GRIINNGSISAQTPRP--------------------------------------NSAPYTATKHAITGLTKSTALDGRMH 207 (281)
T ss_dssp EEEEEECCGGGTCCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred cEEEEECCHHhCCCCC--------------------------------------CChhHHHHHHHHHHHHHHHHHHhccc
Confidence 6999999986643211 016899999999998877654 5
Q ss_pred CCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcc
Q psy7538 243 GMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLN 316 (543)
Q Consensus 243 ~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~ 316 (543)
++.+..++|+.|..+.... ...+... .........++..+|+|++++.++..+..
T Consensus 208 gI~vn~v~PG~v~T~~~~~-----------------~~~~~~~--~~~~~~~~~~~~pedvA~~v~fL~s~~~~ 262 (281)
T 4dry_A 208 DIACGQIDIGNAATDMTAR-----------------MSTGVLQ--ANGEVAAEPTIPIEHIAEAVVYMASLPLS 262 (281)
T ss_dssp TEEEEEEEEECBCC------------------------CEEEC--TTSCEEECCCBCHHHHHHHHHHHHHSCTT
T ss_pred CeEEEEEEECcCcChhhhh-----------------hcchhhh--hhhcccccCCCCHHHHHHHHHHHhCCCcc
Confidence 8999999999876543211 1000000 00001122367899999999998876553
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.69 E-value=9.8e-16 Score=152.78 Aligned_cols=224 Identities=14% Similarity=0.114 Sum_probs=149.5
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|+||++++++|++.|. +|+++.|+.. ++++++. +.+.. ....++.++.+|+
T Consensus 21 l~~k~~lVTGas~gIG~aia~~L~~~G~---~V~~~~r~~~-----~~~~~~~-----~~l~~----~~~~~~~~~~~Dv 83 (288)
T 2x9g_A 21 MEAPAAVVTGAAKRIGRAIAVKLHQTGY---RVVIHYHNSA-----EAAVSLA-----DELNK----ERSNTAVVCQADL 83 (288)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHHTC---EEEEEESSCH-----HHHHHHH-----HHHHH----HSTTCEEEEECCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---eEEEEeCCch-----HHHHHHH-----HHHHh----hcCCceEEEEeec
Confidence 6789999999999999999999999986 7899998751 2222211 11211 1124688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC---------c--------ccHHHHHHHHHHHHHHHHHHHHhc
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF---------D--------EPIKTAVILNTRGTRDMLELSKQM 163 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~---------~--------~~~~~~~~~Nv~gt~~ll~~a~~~ 163 (543)
++++. .+++++.+++ ++|++||+||.... + +.++..+++|+.|+.++++++...
T Consensus 84 ~~~~~--~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 161 (288)
T 2x9g_A 84 TNSNV--LPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQR 161 (288)
T ss_dssp SCSTT--HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCccC--CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 98220 0125555554 79999999996531 1 234567899999999999888653
Q ss_pred -c--C------CceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHH
Q psy7538 164 -K--N------LKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEG 234 (543)
Q Consensus 164 -~--~------l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~ 234 (543)
. + ..++|++||..+..... + ...|+.||+..+.
T Consensus 162 ~~~~~~~~~~~~g~iv~isS~~~~~~~~---------~-----------------------------~~~Y~asKaa~~~ 203 (288)
T 2x9g_A 162 QKGTNPNCTSSNLSIVNLCDAMVDQPCM---------A-----------------------------FSLYNMGKHALVG 203 (288)
T ss_dssp C--------CCCEEEEEECCTTTTSCCT---------T-----------------------------CHHHHHHHHHHHH
T ss_pred HhhcCCCCCCCCeEEEEEecccccCCCC---------C-----------------------------CchHHHHHHHHHH
Confidence 1 1 46899999986643211 0 1689999998888
Q ss_pred HHHHHhh----cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCccccc-chHHHHHHHHHH
Q psy7538 235 LVAECME----LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADF-LPADVAINGVFL 309 (543)
Q Consensus 235 ~v~~~~~----~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~-V~vddva~a~i~ 309 (543)
+.+..+. .|+.+.+++|+.|.++. .. .+. ......... ....+ ...+|+|++++.
T Consensus 204 l~~~la~e~~~~gI~vn~v~PG~v~t~~-~~---------~~~-~~~~~~~~~---------p~~r~~~~pedvA~~v~~ 263 (288)
T 2x9g_A 204 LTQSAALELAPYGIRVNGVAPGVSLLPV-AM---------GEE-EKDKWRRKV---------PLGRREASAEQIADAVIF 263 (288)
T ss_dssp HHHHHHHHHGGGTEEEEEEEESSCSCCT-TS---------CHH-HHHHHHHTC---------TTTSSCCCHHHHHHHHHH
T ss_pred HHHHHHHHhhccCeEEEEEEeccccCcc-cc---------ChH-HHHHHHhhC---------CCCCCCCCHHHHHHHHHH
Confidence 8876554 58999999999997764 10 111 111121111 11124 678999999998
Q ss_pred HhhhhcccCCCCCCcEEEeecC
Q psy7538 310 FTWDFLNSKESERKSVCNLTSN 331 (543)
Q Consensus 310 a~~~~~~~~~~~~~~vyni~s~ 331 (543)
++..... ...|+++++.++
T Consensus 264 l~s~~~~---~itG~~i~vdGG 282 (288)
T 2x9g_A 264 LVSGSAQ---YITGSIIKVDGG 282 (288)
T ss_dssp HHSGGGT---TCCSCEEEESTT
T ss_pred HhCcccc---CccCCEEEECcc
Confidence 8865432 135788888776
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.69 E-value=9.2e-16 Score=151.78 Aligned_cols=219 Identities=13% Similarity=0.109 Sum_probs=142.5
Q ss_pred hhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 26 KTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 26 ~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
.-++ |+++||||+|+||++++++|++.|+ +|+++.|+. ++++++. +.+ ... .++.++.+
T Consensus 18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~---~V~~~~r~~------~~~~~~~-----~~~-----~~~-~~~~~~~~ 76 (272)
T 2nwq_A 18 SHMS-STLFITGATSGFGEACARRFAEAGW---SLVLTGRRE------ERLQALA-----GEL-----SAK-TRVLPLTL 76 (272)
T ss_dssp ---C-CEEEESSTTTSSHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH-----HHH-----TTT-SCEEEEEC
T ss_pred CCcC-cEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHH-----HHh-----hcC-CcEEEEEc
Confidence 3455 8999999999999999999999986 788999864 2332221 111 111 47889999
Q ss_pred cCCCCCCCCCHHHHHHHhcC-------ccEEEEcCccCCC--------cccHHHHHHHHHHHHHHHHHHHHhc---cCCc
Q psy7538 106 DITQLKLGISEIDKKELIDN-------VDIVYHVAATIRF--------DEPIKTAVILNTRGTRDMLELSKQM---KNLK 167 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~~-------vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~ 167 (543)
|+++++ +++.+++. +|++||+||.... .+.++..+++|+.|+.++.+++... .+..
T Consensus 77 Dv~d~~------~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g 150 (272)
T 2nwq_A 77 DVRDRA------AMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAG 150 (272)
T ss_dssp CTTCHH------HHHHHHHTCCGGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTT
T ss_pred CCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999875 77777764 5999999997532 2446678999999988877776431 1456
Q ss_pred -eEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----c
Q psy7538 168 -CFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----L 242 (543)
Q Consensus 168 -~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~ 242 (543)
++|++||..+..... ....|+.||+..|.+.+..+. .
T Consensus 151 ~~IV~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~el~~~ 192 (272)
T 2nwq_A 151 ASIVNLGSVAGKWPYP--------------------------------------GSHVYGGTKAFVEQFSLNLRCDLQGT 192 (272)
T ss_dssp CEEEEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHTTCTTS
T ss_pred cEEEEeCCchhccCCC--------------------------------------CCchHHHHHHHHHHHHHHHHHHhCcc
Confidence 999999986643210 016899999999999987764 5
Q ss_pred CCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCC
Q psy7538 243 GMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322 (543)
Q Consensus 243 ~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~ 322 (543)
|+++.+++|+.|.++.... ...+..... ..... ....+..+|+|++++.++..... ..
T Consensus 193 gIrvn~v~PG~v~T~~~~~------~~~~~~~~~--------~~~~~----~~~~~~pedvA~~v~~l~s~~~~----~~ 250 (272)
T 2nwq_A 193 GVRVTNLEPGLCESEFSLV------RFGGDQARY--------DKTYA----GAHPIQPEDIAETIFWIMNQPAH----LN 250 (272)
T ss_dssp CCEEEEEEECSBC--------------------------------------CCCCBCHHHHHHHHHHHHTSCTT----EE
T ss_pred CeEEEEEEcCCCcCcchhc------ccccchHHH--------HHhhc----cCCCCCHHHHHHHHHHHhCCCcc----Cc
Confidence 8999999999886653210 000000000 00000 01236899999999988865432 23
Q ss_pred CcEEEeecC
Q psy7538 323 KSVCNLTSN 331 (543)
Q Consensus 323 ~~vyni~s~ 331 (543)
++.+.+..+
T Consensus 251 g~~i~v~~~ 259 (272)
T 2nwq_A 251 INSLEIMPV 259 (272)
T ss_dssp EEEEEEEET
T ss_pred cceEEEeec
Confidence 555555544
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.68 E-value=3.1e-15 Score=152.02 Aligned_cols=225 Identities=12% Similarity=0.068 Sum_probs=151.6
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEe-cCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLM-RTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~-R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
+++|+++||||+|+||++++++|++.|+ +|+++. |+. ++++++. +.+... ...++.++.+|
T Consensus 44 l~~k~~lVTGas~GIG~aia~~La~~G~---~Vv~~~~r~~------~~~~~~~-----~~l~~~----~~~~~~~~~~D 105 (328)
T 2qhx_A 44 PTVPVALVTGAAKRLGRSIAEGLHAEGY---AVCLHYHRSA------AEANALS-----ATLNAR----RPNSAITVQAD 105 (328)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCH------HHHHHHH-----HHHHHH----STTCEEEEECC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEcCCCH------HHHHHHH-----HHHHhh----cCCeEEEEEee
Confidence 6789999999999999999999999986 788888 753 2332221 112111 12468899999
Q ss_pred CCCCC-----------CCCCHHHHHHHhc-------CccEEEEcCccCCC---------------------cccHHHHHH
Q psy7538 107 ITQLK-----------LGISEIDKKELID-------NVDIVYHVAATIRF---------------------DEPIKTAVI 147 (543)
Q Consensus 107 l~~~~-----------lgls~~~~~~l~~-------~vd~ViH~AA~v~~---------------------~~~~~~~~~ 147 (543)
+++++ ..-+.++++.+++ .+|++||+||.... .+.++..++
T Consensus 106 l~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 185 (328)
T 2qhx_A 106 LSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFG 185 (328)
T ss_dssp CSSSCBCC-------CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHH
T ss_pred CCCchhccccccccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHH
Confidence 99875 0000113444443 79999999997532 233456799
Q ss_pred HHHHHHHHHHHHHHhc---cC------CceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhcc
Q psy7538 148 LNTRGTRDMLELSKQM---KN------LKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDIL 218 (543)
Q Consensus 148 ~Nv~gt~~ll~~a~~~---~~------l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~ 218 (543)
+|+.|+.++++++... .+ ..++|++||..+.....
T Consensus 186 vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~IV~isS~~~~~~~~------------------------------------ 229 (328)
T 2qhx_A 186 SNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLL------------------------------------ 229 (328)
T ss_dssp HHTHHHHHHHHHHHHHHHHSCGGGSCSCEEEEEECCTTTTSCCT------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcCCCCCcEEEEECchhhccCCC------------------------------------
Confidence 9999999999887642 13 57999999986543211
Q ss_pred CCCCchHHHHHHHHHHHHHHHhh----cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcc
Q psy7538 219 GEFPNSYAYTKCLAEGLVAECME----LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGM 294 (543)
Q Consensus 219 ~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~ 294 (543)
....|+.||+..+.+.+..+. .++.+.+++|+.|..+. + .. + .......... ..
T Consensus 230 --~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~-------~~--~-~~~~~~~~~~---------p~ 287 (328)
T 2qhx_A 230 --GYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D-------MP--P-AVWEGHRSKV---------PL 287 (328)
T ss_dssp --TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-C-------SC--H-HHHHHHHTTC---------TT
T ss_pred --CcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-c-------cc--H-HHHHHHHhhC---------CC
Confidence 016899999999999877654 48999999999987654 1 11 1 1222222211 11
Q ss_pred c-ccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecC
Q psy7538 295 A-DFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSN 331 (543)
Q Consensus 295 ~-d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~ 331 (543)
. -+...+|+|++++.++..... ...|+++++.++
T Consensus 288 ~~r~~~pedvA~~v~~l~s~~~~---~itG~~i~vdGG 322 (328)
T 2qhx_A 288 YQRDSSAAEVSDVVIFLCSSKAK---YITGTCVKVDGG 322 (328)
T ss_dssp TTSCBCHHHHHHHHHHHHSGGGT---TCCSCEEEESTT
T ss_pred CCCCCCHHHHHHHHHHHhCcccc---CccCcEEEECCC
Confidence 1 367899999999988864332 135789998876
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.68 E-value=2.8e-15 Score=153.28 Aligned_cols=207 Identities=14% Similarity=0.127 Sum_probs=143.5
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCH-HHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTP-NQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~-~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
-++||+|+||||+|.||++++++|++.|. +|+++.|+...... .+.+++. .+.+ .....++.++.+
T Consensus 42 ~l~gk~vlVTGas~GIG~aia~~La~~Ga---~Vvl~~r~~~~~~~l~~~l~~~-----~~~~-----~~~g~~~~~~~~ 108 (346)
T 3kvo_A 42 RLAGCTVFITGASRGIGKAIALKAAKDGA---NIVIAAKTAQPHPKLLGTIYTA-----AEEI-----EAVGGKALPCIV 108 (346)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTC---EEEEEESCCSCCSSSCCCHHHH-----HHHH-----HHTTCEEEEEEC
T ss_pred CCCCCEEEEeCCChHHHHHHHHHHHHCCC---EEEEEECChhhhhhhHHHHHHH-----HHHH-----HhcCCeEEEEEc
Confidence 46899999999999999999999999986 89999998654210 0011110 0111 112357889999
Q ss_pred cCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCce
Q psy7538 106 DITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKC 168 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~ 168 (543)
|+++++ +++.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... .+..+
T Consensus 109 Dv~d~~------~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~ 182 (346)
T 3kvo_A 109 DVRDEQ------QISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAH 182 (346)
T ss_dssp CTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCE
T ss_pred cCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCE
Confidence 999875 6666654 79999999997532 2446778999999999999998542 24579
Q ss_pred EEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh---cCCc
Q psy7538 169 FTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME---LGMP 245 (543)
Q Consensus 169 ~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~---~~lp 245 (543)
+|++||..+..... + + ....|+.||+..+.+.+..+. .++.
T Consensus 183 IV~iSS~~~~~~~~------~-~-----------------------------~~~~Y~aSKaal~~l~~~la~e~~~gIr 226 (346)
T 3kvo_A 183 ILNISPPLNLNPVW------F-K-----------------------------QHCAYTIAKYGMSMYVLGMAEEFKGEIA 226 (346)
T ss_dssp EEEECCCCCCCGGG------T-S-----------------------------SSHHHHHHHHHHHHHHHHHHHHTTTTCE
T ss_pred EEEECCHHHcCCCC------C-C-----------------------------CchHHHHHHHHHHHHHHHHHHHhcCCcE
Confidence 99999985532200 0 0 016899999999998877665 4799
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhh
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWD 313 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~ 313 (543)
+..+.|+.+..+ .+...... ......+...+|+|++++.++..
T Consensus 227 vn~v~PG~~i~T----------------~~~~~~~~---------~~~~~r~~~pedvA~~v~~L~s~ 269 (346)
T 3kvo_A 227 VNALWPKTAIHT----------------AAMDMLGG---------PGIESQCRKVDIIADAAYSIFQK 269 (346)
T ss_dssp EEEEECSBCBCC----------------HHHHHHCC-----------CGGGCBCTHHHHHHHHHHHTS
T ss_pred EEEEeCCCcccc----------------HHHHhhcc---------ccccccCCCHHHHHHHHHHHHhc
Confidence 999999853322 12221111 11123456789999999998876
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.67 E-value=6.5e-16 Score=151.93 Aligned_cols=167 Identities=14% Similarity=0.195 Sum_probs=123.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|+||++++++|++.|+ +|+++.|+. ++++++. +.++ ....++.++.+|+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~------~~~~~~~-----~~~~-----~~~~~~~~~~~D~ 65 (262)
T 1zem_A 5 FNGKVCLVTGAGGNIGLATALRLAEEGT---AIALLDMNR------EALEKAE-----ASVR-----EKGVEARSYVCDV 65 (262)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH-----HHHH-----TTTSCEEEEECCT
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHH-----HHHH-----hcCCcEEEEEecC
Confidence 5789999999999999999999999986 788888864 2222211 1111 1124688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccC-CC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATI-RF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v-~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~ 169 (543)
++++ +++.+++ ++|+|||+||.. .. .+.++..+++|+.|+.++++++... .+..++
T Consensus 66 ~~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~i 139 (262)
T 1zem_A 66 TSEE------AVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRI 139 (262)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEE
Confidence 9875 5655554 789999999965 21 2346678999999999999887653 245799
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+..... . ...|+.||+..+.+.+..+. .++.
T Consensus 140 v~isS~~~~~~~~----------~----------------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~ 181 (262)
T 1zem_A 140 VNTASMAGVKGPP----------N----------------------------MAAYGTSKGAIIALTETAALDLAPYNIR 181 (262)
T ss_dssp EEECCHHHHSCCT----------T----------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred EEEcchhhccCCC----------C----------------------------CchHHHHHHHHHHHHHHHHHHHHhhCeE
Confidence 9999986543211 0 15899999988888776543 5899
Q ss_pred EEEEecCeeeec
Q psy7538 246 CMILRPSIVVPI 257 (543)
Q Consensus 246 ~~IlRps~V~G~ 257 (543)
+.+++|+.|..+
T Consensus 182 vn~v~PG~v~t~ 193 (262)
T 1zem_A 182 VNAISPGYMGPG 193 (262)
T ss_dssp EEEEEECSBCSS
T ss_pred EEEEecCCcCcc
Confidence 999999987543
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.67 E-value=1.6e-15 Score=147.48 Aligned_cols=212 Identities=14% Similarity=0.127 Sum_probs=142.8
Q ss_pred hhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 26 KTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 26 ~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
+-++||+++||||+|+||++++++|++.|+ +|+++.|+. ++++++. +.++. ....+..++.+
T Consensus 10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~---~V~~~~r~~------~~~~~~~-----~~~~~----~~~~~~~~~~~ 71 (247)
T 3i1j_A 10 ELLKGRVILVTGAARGIGAAAARAYAAHGA---SVVLLGRTE------ASLAEVS-----DQIKS----AGQPQPLIIAL 71 (247)
T ss_dssp TTTTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH-----HHHHH----TTSCCCEEEEC
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEecCH------HHHHHHH-----HHHHh----cCCCCceEEEe
Confidence 347899999999999999999999999987 789999874 2232211 11211 11245667777
Q ss_pred cC--CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC--------cccHHHHHHHHHHHHHHHHHHHHhc---cC
Q psy7538 106 DI--TQLKLGISEIDKKELID-------NVDIVYHVAATIRF--------DEPIKTAVILNTRGTRDMLELSKQM---KN 165 (543)
Q Consensus 106 Dl--~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~ 165 (543)
|+ ++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .+
T Consensus 72 d~d~~~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~ 145 (247)
T 3i1j_A 72 NLENATAQ------QYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSE 145 (247)
T ss_dssp CTTTCCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS
T ss_pred ccccCCHH------HHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC
Confidence 77 5543 5555543 78999999997532 2456678999999999999998431 24
Q ss_pred CceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----
Q psy7538 166 LKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME---- 241 (543)
Q Consensus 166 l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~---- 241 (543)
..++|++||..+..... ....|+.||+..+.+.+..+.
T Consensus 146 ~~~iv~isS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~ 187 (247)
T 3i1j_A 146 DASIAFTSSSVGRKGRA--------------------------------------NWGAYGVSKFATEGLMQTLADELEG 187 (247)
T ss_dssp SEEEEEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCeEEEEcchhhcCCCC--------------------------------------CcchhHHHHHHHHHHHHHHHHHhcC
Confidence 57999999986643211 016899999999998876554
Q ss_pred -cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCC
Q psy7538 242 -LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKES 320 (543)
Q Consensus 242 -~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~ 320 (543)
.++.+..++|+.|-.+ +...... ......+...+|+|++++.++..... .
T Consensus 188 ~~~i~v~~v~PG~v~t~-----------------~~~~~~~---------~~~~~~~~~p~dva~~~~~l~s~~~~-~-- 238 (247)
T 3i1j_A 188 VTAVRANSINPGATRTG-----------------MRAQAYP---------DENPLNNPAPEDIMPVYLYLMGPDST-G-- 238 (247)
T ss_dssp TSSEEEEEEECCCCSSH-----------------HHHHHST---------TSCGGGSCCGGGGTHHHHHHHSGGGT-T--
T ss_pred CCCeEEEEEecCcccCc-----------------cchhccc---------ccCccCCCCHHHHHHHHHHHhCchhc-c--
Confidence 3688889999866332 2221111 11223456789999999888765432 1
Q ss_pred CCCcEEEe
Q psy7538 321 ERKSVCNL 328 (543)
Q Consensus 321 ~~~~vyni 328 (543)
..|+.+++
T Consensus 239 itG~~i~~ 246 (247)
T 3i1j_A 239 INGQALNA 246 (247)
T ss_dssp CCSCEEEC
T ss_pred ccCeeecC
Confidence 24666554
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=7.6e-16 Score=153.11 Aligned_cols=227 Identities=13% Similarity=0.113 Sum_probs=150.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||+|+||++++++|++.|. +|+++.|+. ++++++.+ ....++.++.+|+
T Consensus 3 l~gk~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~------~~~~~~~~-------------~~~~~~~~~~~Dv 60 (281)
T 3zv4_A 3 LTGEVALITGGASGLGRALVDRFVAEGA---RVAVLDKSA------ERLRELEV-------------AHGGNAVGVVGDV 60 (281)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHHH-------------HTBTTEEEEECCT
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCcC---EEEEEeCCH------HHHHHHHH-------------HcCCcEEEEEcCC
Confidence 5789999999999999999999999986 888888863 33333211 1135788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCCc------------ccHHHHHHHHHHHHHHHHHHHHhc--cCC
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRFD------------EPIKTAVILNTRGTRDMLELSKQM--KNL 166 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~~------------~~~~~~~~~Nv~gt~~ll~~a~~~--~~l 166 (543)
++++ +++.+++ .+|++||+||..... +.++..+++|+.|+.++++++... ++-
T Consensus 61 ~~~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~ 134 (281)
T 3zv4_A 61 RSLQ------DQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR 134 (281)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC
Confidence 9875 5555544 689999999975321 235668899999999999988652 112
Q ss_pred ceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh---cC
Q psy7538 167 KCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME---LG 243 (543)
Q Consensus 167 ~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~---~~ 243 (543)
.++|++||..+..... ....|+.||+..+.+.+..+. .+
T Consensus 135 g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~ 176 (281)
T 3zv4_A 135 GSVVFTISNAGFYPNG--------------------------------------GGPLYTATKHAVVGLVRQMAFELAPH 176 (281)
T ss_dssp CEEEEECCGGGTSSSS--------------------------------------SCHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CeEEEEecchhccCCC--------------------------------------CCchhHHHHHHHHHHHHHHHHHhcCC
Confidence 5999999986543211 015799999999999887665 24
Q ss_pred CcEEEEecCeeeecCCCCCCCCCCC-CCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCC
Q psy7538 244 MPCMILRPSIVVPIYKEPLPGWTDN-INGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322 (543)
Q Consensus 244 lp~~IlRps~V~G~~~~p~~gw~d~-~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~ 322 (543)
+.+..+.|+.|..+...+....... ............. ......+...+|+|++++.++..... .-..
T Consensus 177 Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~p~~r~~~pedvA~~v~fL~s~~~~--~~it 245 (281)
T 3zv4_A 177 VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKS---------VLPIGRMPALEEYTGAYVFFATRGDS--LPAT 245 (281)
T ss_dssp SEEEEEEECSSCC--CCCTTCC--------CCHHHHHHH---------TCTTSSCCCGGGGSHHHHHHHSTTTS--TTCS
T ss_pred CEEEEEECCcCcCCcccccccccccccccchhHHHHHHh---------cCCCCCCCCHHHHHHHHHHhhccccc--cccc
Confidence 9999999998876543221100000 0000001111111 11223467789999999888763321 1135
Q ss_pred CcEEEeecC
Q psy7538 323 KSVCNLTSN 331 (543)
Q Consensus 323 ~~vyni~s~ 331 (543)
|+++++.+|
T Consensus 246 G~~i~vdGG 254 (281)
T 3zv4_A 246 GALLNYDGG 254 (281)
T ss_dssp SCEEEESSS
T ss_pred CcEEEECCC
Confidence 889999877
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.66 E-value=2.4e-15 Score=148.02 Aligned_cols=223 Identities=11% Similarity=0.037 Sum_probs=154.2
Q ss_pred cCCCEEEEEcCc--chhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 28 YENKSIFLSGGS--GFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 28 ~~~~~VlITGat--GFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
++||+|+||||+ |+||++++++|++.|. +|.++.|..... .++.++++ ... ...++.++.+
T Consensus 18 l~~k~vlITGas~~~giG~~~a~~l~~~G~---~v~~~~~~~~~~-~~~~~~~l---------~~~----~~~~~~~~~~ 80 (267)
T 3gdg_A 18 LKGKVVVVTGASGPKGMGIEAARGCAEMGA---AVAITYASRAQG-AEENVKEL---------EKT----YGIKAKAYKC 80 (267)
T ss_dssp CTTCEEEETTCCSSSSHHHHHHHHHHHTSC---EEEECBSSSSSH-HHHHHHHH---------HHH----HCCCEECCBC
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHHHCCC---eEEEEeCCcchh-HHHHHHHH---------HHh----cCCceeEEec
Confidence 689999999999 8999999999999986 788888876431 12222222 111 1257889999
Q ss_pred cCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHH----hccCCc
Q psy7538 106 DITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSK----QMKNLK 167 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~----~~~~l~ 167 (543)
|+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++++++. +. +..
T Consensus 81 Dl~~~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g 153 (267)
T 3gdg_A 81 QVDSYE------SCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKER-GTG 153 (267)
T ss_dssp CTTCHH------HHHHHHHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCC
T ss_pred CCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHc-CCc
Confidence 999875 5665554 57999999997542 24466789999999999999883 33 457
Q ss_pred eEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh---cCC
Q psy7538 168 CFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME---LGM 244 (543)
Q Consensus 168 ~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~---~~l 244 (543)
++|++||..+..... +++ ...|+.||+..+.+.+..+. ..+
T Consensus 154 ~iv~isS~~~~~~~~-------~~~-----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~i 197 (267)
T 3gdg_A 154 SLVITASMSGHIANF-------PQE-----------------------------QTSYNVAKAGCIHMARSLANEWRDFA 197 (267)
T ss_dssp EEEEECCGGGTSCCS-------SSC-----------------------------CHHHHHHHHHHHHHHHHHHHHTTTTC
T ss_pred eEEEEccccccccCC-------CCC-----------------------------CCcchHHHHHHHHHHHHHHHHhccCc
Confidence 999999986543210 001 16899999999999988765 237
Q ss_pred cEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCc
Q psy7538 245 PCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKS 324 (543)
Q Consensus 245 p~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~ 324 (543)
.+..+.|+.|-.+..... +......... ......+..++|+|++++.++..... -..|+
T Consensus 198 ~v~~v~PG~v~t~~~~~~---------~~~~~~~~~~---------~~~~~r~~~~~dva~~~~~l~s~~~~---~itG~ 256 (267)
T 3gdg_A 198 RVNSISPGYIDTGLSDFV---------PKETQQLWHS---------MIPMGRDGLAKELKGAYVYFASDAST---YTTGA 256 (267)
T ss_dssp EEEEEEECCEECSCGGGS---------CHHHHHHHHT---------TSTTSSCEETHHHHHHHHHHHSTTCT---TCCSC
T ss_pred EEEEEECCccccchhhhC---------CHHHHHHHHh---------cCCCCCCcCHHHHHhHhheeecCccc---cccCC
Confidence 889999998865432211 1112222222 12334567789999999888765332 13588
Q ss_pred EEEeecC
Q psy7538 325 VCNLTSN 331 (543)
Q Consensus 325 vyni~s~ 331 (543)
++++.+|
T Consensus 257 ~i~vdgG 263 (267)
T 3gdg_A 257 DLLIDGG 263 (267)
T ss_dssp EEEESTT
T ss_pred EEEECCc
Confidence 9999876
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.66 E-value=4.8e-15 Score=148.83 Aligned_cols=204 Identities=14% Similarity=0.112 Sum_probs=127.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
.++|+|+||||+|+||++++++|++.|+ +|++..|+.. ++++. .+.++. ....++.++.+|+
T Consensus 10 ~~~k~vlITGas~GIG~~~a~~L~~~G~---~V~~~~r~~~------~~~~~-----~~~l~~----~~~~~~~~~~~Dl 71 (311)
T 3o26_A 10 TKRRCAVVTGGNKGIGFEICKQLSSNGI---MVVLTCRDVT------KGHEA-----VEKLKN----SNHENVVFHQLDV 71 (311)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEESCHH------HHHHH-----HHHHHT----TTCCSEEEEECCT
T ss_pred CCCcEEEEecCCchHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHH-----HHHHHh----cCCCceEEEEccC
Confidence 5789999999999999999999999986 8999999742 22221 111221 1234789999999
Q ss_pred CCC-CCCCCHHHHHHHh-------cCccEEEEcCccCCC-------------------------------------cccH
Q psy7538 108 TQL-KLGISEIDKKELI-------DNVDIVYHVAATIRF-------------------------------------DEPI 142 (543)
Q Consensus 108 ~~~-~lgls~~~~~~l~-------~~vd~ViH~AA~v~~-------------------------------------~~~~ 142 (543)
+++ + +++.++ .++|+|||+||.... .+.+
T Consensus 72 ~~~~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (311)
T 3o26_A 72 TDPIA------TMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELA 145 (311)
T ss_dssp TSCHH------HHHHHHHHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHH
T ss_pred CCcHH------HHHHHHHHHHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhh
Confidence 997 4 444443 379999999997632 1234
Q ss_pred HHHHHHHHHHHHHHHHHHHhc---cCCceEEEEecCccccCCC---ccccccc-CCCCChHHHHHHHhhcchhhhhhhhh
Q psy7538 143 KTAVILNTRGTRDMLELSKQM---KNLKCFTYISTAYCHPSEK---VLEERTY-LPPDDPHQVILRAESMKEEDLEVFRQ 215 (543)
Q Consensus 143 ~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~vST~y~~~~~~---~i~E~~y-~~p~~~~~~~~~~~~~~~~~~~~~~p 215 (543)
+..+++|+.|+.++++++... .+..++|++||..+..... ...+... +.....+++-.......++..+. .
T Consensus 146 ~~~~~~N~~g~~~l~~~~~~~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 223 (311)
T 3o26_A 146 EECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKEN--L 223 (311)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTT--C
T ss_pred hhheeeeeehHHHHHHHhhHhhccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhcc--c
Confidence 567999999999998887542 2457999999985543211 0000000 00111111111111111111000 0
Q ss_pred hccCCCC---chHHHHHHHHHHHHHHHhh--cCCcEEEEecCeeeec
Q psy7538 216 DILGEFP---NSYAYTKCLAEGLVAECME--LGMPCMILRPSIVVPI 257 (543)
Q Consensus 216 ~~~~~~p---n~Y~~tK~~aE~~v~~~~~--~~lp~~IlRps~V~G~ 257 (543)
.-..++| ..|+.||+..+.+.+..+. .++.+..++||.|..+
T Consensus 224 ~~~~~~~~~~~~Y~~SK~a~~~~~~~la~e~~~i~v~~v~PG~v~T~ 270 (311)
T 3o26_A 224 IETNGWPSFGAAYTTSKACLNAYTRVLANKIPKFQVNCVCPGLVKTE 270 (311)
T ss_dssp TTTTTCCSSCHHHHHHHHHHHHHHHHHHHHCTTSEEEEECCCSBCSG
T ss_pred cccccCcccchhhHHHHHHHHHHHHHHHhhcCCceEEEecCCceecC
Confidence 0112233 5799999999999988776 4688999999877544
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.65 E-value=3.8e-15 Score=147.46 Aligned_cols=215 Identities=11% Similarity=0.080 Sum_probs=144.4
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCC-HHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKT-PNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~-~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
++||+++||||+|.||++++++|++.|. +|+++.|+..... ..+.+++. .+.+. ....++.++.+|
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~~~~~~~~~~~~-----~~~~~-----~~~~~~~~~~~D 70 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAARDGA---NVAIAAKSAVANPKLPGTIHSA-----AAAVN-----AAGGQGLALKCD 70 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCCSCCTTSCCCHHHH-----HHHHH-----HHTSEEEEEECC
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC---EEEEEeccchhhhhhHHHHHHH-----HHHHH-----hcCCeEEEEeCC
Confidence 4789999999999999999999999986 8999999865321 11111111 01111 123578899999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceE
Q psy7538 107 ITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCF 169 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~ 169 (543)
+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++.+++... .+-.++
T Consensus 71 v~~~~------~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~i 144 (274)
T 3e03_A 71 IREED------QVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHI 144 (274)
T ss_dssp TTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEE
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceE
Confidence 99875 6666554 68999999997532 2446678999999999999988542 245699
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+..... ... ...|+.||+..+.+.+..+. +|+.
T Consensus 145 v~isS~~~~~~~~------------------------------~~~------~~~Y~asKaal~~l~~~la~e~~~~gI~ 188 (274)
T 3e03_A 145 LTLAPPPSLNPAW------------------------------WGA------HTGYTLAKMGMSLVTLGLAAEFGPQGVA 188 (274)
T ss_dssp EECCCCCCCCHHH------------------------------HHH------CHHHHHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred EEECChHhcCCCC------------------------------CCC------CchHHHHHHHHHHHHHHHHHHhhhcCEE
Confidence 9999985532100 000 15799999999998877654 5899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
+..++|+.+..+. +. .... ......+...+|+|++++.++..... -..|++
T Consensus 189 vn~v~PG~~v~T~----------------~~-~~~~---------~~~~~~~~~pedvA~~v~~l~s~~~~---~itG~~ 239 (274)
T 3e03_A 189 INALWPRTVIATD----------------AI-NMLP---------GVDAAACRRPEIMADAAHAVLTREAA---GFHGQF 239 (274)
T ss_dssp EEEEECSBCBCC---------------------------------CCCGGGSBCTHHHHHHHHHHHTSCCT---TCCSCE
T ss_pred EEEEECCcccccc----------------hh-hhcc---------cccccccCCHHHHHHHHHHHhCcccc---ccCCeE
Confidence 9999998433221 00 0000 11122367899999999988865432 124566
Q ss_pred E
Q psy7538 326 C 326 (543)
Q Consensus 326 y 326 (543)
+
T Consensus 240 i 240 (274)
T 3e03_A 240 L 240 (274)
T ss_dssp E
T ss_pred E
Confidence 5
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.1e-14 Score=140.24 Aligned_cols=218 Identities=13% Similarity=0.105 Sum_probs=153.1
Q ss_pred hhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 26 KTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 26 ~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
+.|+||+++||||++-||+.++++|.+.|. +|.+..|+..... .....++..+.+
T Consensus 7 dlf~GK~alVTGas~GIG~aia~~la~~Ga---~Vv~~~~~~~~~~----------------------~~~~~~~~~~~~ 61 (242)
T 4b79_A 7 DIYAGQQVLVTGGSSGIGAAIAMQFAELGA---EVVALGLDADGVH----------------------APRHPRIRREEL 61 (242)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSTTSTT----------------------SCCCTTEEEEEC
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCHHHHh----------------------hhhcCCeEEEEe
Confidence 458999999999999999999999999997 8899999765422 223457889999
Q ss_pred cCCCCCCCCCHHHHHHHhc---CccEEEEcCccCCC-----cccHHHHHHHHHHHHHHHHHHHHhc--cCCceEEEEecC
Q psy7538 106 DITQLKLGISEIDKKELID---NVDIVYHVAATIRF-----DEPIKTAVILNTRGTRDMLELSKQM--KNLKCFTYISTA 175 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~---~vd~ViH~AA~v~~-----~~~~~~~~~~Nv~gt~~ll~~a~~~--~~l~~~V~vST~ 175 (543)
|+++++ +++++++ ++|+++|+||..+. .+.++..+++|+.|+..+.+++..+ ++-.++|++||.
T Consensus 62 Dv~~~~------~v~~~~~~~g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~ 135 (242)
T 4b79_A 62 DITDSQ------RLQRLFEALPRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASM 135 (242)
T ss_dssp CTTCHH------HHHHHHHHCSCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCG
T ss_pred cCCCHH------HHHHHHHhcCCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeec
Confidence 999875 6666665 68999999997643 2456778999999999888877543 112699999998
Q ss_pred ccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEEEec
Q psy7538 176 YCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMILRP 251 (543)
Q Consensus 176 y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~IlRp 251 (543)
.+...... ...|+.||+....+.+..+. +|+.+..+-|
T Consensus 136 ~~~~~~~~--------------------------------------~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~P 177 (242)
T 4b79_A 136 YSTFGSAD--------------------------------------RPAYSASKGAIVQLTRSLACEYAAERIRVNAIAP 177 (242)
T ss_dssp GGTSCCSS--------------------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred cccCCCCC--------------------------------------CHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEe
Confidence 76432110 15899999988888776554 6899999999
Q ss_pred CeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecC
Q psy7538 252 SIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSN 331 (543)
Q Consensus 252 s~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~ 331 (543)
+.|-.+..+. ..........+....+ ..-+-..+|+|++++.++..... -..|+++.+.+|
T Consensus 178 G~i~T~m~~~-------~~~~~~~~~~~~~~~P---------lgR~g~peeiA~~v~fLaSd~a~---~iTG~~l~VDGG 238 (242)
T 4b79_A 178 GWIDTPLGAG-------LKADVEATRRIMQRTP---------LARWGEAPEVASAAAFLCGPGAS---FVTGAVLAVDGG 238 (242)
T ss_dssp CSBCCC------------CCCHHHHHHHHHTCT---------TCSCBCHHHHHHHHHHHTSGGGT---TCCSCEEEESTT
T ss_pred CCCCChhhhc-------ccCCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCchhc---CccCceEEECcc
Confidence 9885543221 1111122222222211 11244578999999888765432 135788888765
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=1.5e-14 Score=144.48 Aligned_cols=225 Identities=12% Similarity=0.078 Sum_probs=150.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEe-cCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLM-RTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~-R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
+++|+++||||+|+||++++++|++.|+ +|+++. |+. ++++++. +.++.. ...++.++.+|
T Consensus 7 l~~k~~lVTGas~GIG~aia~~la~~G~---~V~~~~~r~~------~~~~~~~-----~~l~~~----~~~~~~~~~~D 68 (291)
T 1e7w_A 7 PTVPVALVTGAAKRLGRSIAEGLHAEGY---AVCLHYHRSA------AEANALS-----ATLNAR----RPNSAITVQAD 68 (291)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCH------HHHHHHH-----HHHHHH----STTCEEEEECC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---eEEEEcCCCH------HHHHHHH-----HHHhhh----cCCeeEEEEee
Confidence 5789999999999999999999999987 788888 763 2232221 122111 12468899999
Q ss_pred CCCCCC-----------CCCHHHHHHHhc-------CccEEEEcCccCCC---------------------cccHHHHHH
Q psy7538 107 ITQLKL-----------GISEIDKKELID-------NVDIVYHVAATIRF---------------------DEPIKTAVI 147 (543)
Q Consensus 107 l~~~~l-----------gls~~~~~~l~~-------~vd~ViH~AA~v~~---------------------~~~~~~~~~ 147 (543)
+++++- +-+.++++.+++ .+|++||+||.... .+.++..++
T Consensus 69 l~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (291)
T 1e7w_A 69 LSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFG 148 (291)
T ss_dssp CSSSCBCCCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHH
T ss_pred cCCcccccccccccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHH
Confidence 998750 000113444443 79999999996532 234556899
Q ss_pred HHHHHHHHHHHHHHhc---cC------CceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhcc
Q psy7538 148 LNTRGTRDMLELSKQM---KN------LKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDIL 218 (543)
Q Consensus 148 ~Nv~gt~~ll~~a~~~---~~------l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~ 218 (543)
+|+.|+.++++++... .+ ..++|++||..+.....
T Consensus 149 ~N~~g~~~l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~~------------------------------------ 192 (291)
T 1e7w_A 149 SNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLL------------------------------------ 192 (291)
T ss_dssp HHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSCCT------------------------------------
T ss_pred HHhHHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEechhhcCCCC------------------------------------
Confidence 9999999999988642 13 47999999986643211
Q ss_pred CCCCchHHHHHHHHHHHHHHHhh----cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcc
Q psy7538 219 GEFPNSYAYTKCLAEGLVAECME----LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGM 294 (543)
Q Consensus 219 ~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~ 294 (543)
....|+.||+..+.+.+..+. +++.+..++|+.|..+. + . .+ .......... ..
T Consensus 193 --~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~-~--------~~-~~~~~~~~~~---------p~ 250 (291)
T 1e7w_A 193 --GYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D-M--------PP-AVWEGHRSKV---------PL 250 (291)
T ss_dssp --TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G-S--------CH-HHHHHHHTTC---------TT
T ss_pred --CCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c-C--------CH-HHHHHHHhhC---------CC
Confidence 016899999999998877654 58999999999875442 1 1 11 1222222111 11
Q ss_pred c-ccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecC
Q psy7538 295 A-DFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSN 331 (543)
Q Consensus 295 ~-d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~ 331 (543)
. -+...+|+|++++.++..... -..|+++++.++
T Consensus 251 ~~r~~~pedvA~~v~~l~s~~~~---~itG~~i~vdGG 285 (291)
T 1e7w_A 251 YQRDSSAAEVSDVVIFLCSSKAK---YITGTCVKVDGG 285 (291)
T ss_dssp TTSCBCHHHHHHHHHHHHSGGGT---TCCSCEEEESTT
T ss_pred CCCCCCHHHHHHHHHHHhCCccc---CccCcEEEECCC
Confidence 1 356899999999988865332 135788888776
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=2e-15 Score=147.71 Aligned_cols=219 Identities=13% Similarity=0.053 Sum_probs=139.8
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+++||||+|+||++++++|++.|+ +|+++.|+.... +.+.+ +.... .++..+ |..
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~---~~~~~---------l~~~~-----~~~~~~--d~~-- 57 (254)
T 1zmt_A 2 STAIVTNVKHFGGMGSALRLSEAGH---TVACHDESFKQK---DELEA---------FAETY-----PQLKPM--SEQ-- 57 (254)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTTC---EEEECCGGGGSH---HHHHH---------HHHHC-----TTSEEC--CCC--
T ss_pred eEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHHHH---HHHHH---------HHhcC-----CcEEEE--CHH--
Confidence 6899999999999999999999987 788998875321 11211 11111 123333 222
Q ss_pred CCCCCHHHHHHHh-------cCccEEEEcCccC-CC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEEEE
Q psy7538 111 KLGISEIDKKELI-------DNVDIVYHVAATI-RF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFTYI 172 (543)
Q Consensus 111 ~lgls~~~~~~l~-------~~vd~ViH~AA~v-~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~v 172 (543)
+++.++ .++|++||+||.. .. .+.++..+++|+.|+.++++++... .+..++|++
T Consensus 58 -------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~i 130 (254)
T 1zmt_A 58 -------EPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFI 130 (254)
T ss_dssp -------SHHHHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred -------HHHHHHHHHHHHhCCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEE
Confidence 233332 3799999999976 31 2345678999999999999887531 245799999
Q ss_pred ecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEE
Q psy7538 173 STAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMI 248 (543)
Q Consensus 173 ST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~I 248 (543)
||..+..... ....|+.||+..+.+.+..+. +++.+.+
T Consensus 131 sS~~~~~~~~--------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~ 172 (254)
T 1zmt_A 131 TSATPFGPWK--------------------------------------ELSTYTSARAGACTLANALSKELGEYNIPVFA 172 (254)
T ss_dssp CCSTTTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEE
T ss_pred CCcccccCCC--------------------------------------CchHHHHHHHHHHHHHHHHHHHhhhcCcEEEE
Confidence 9986643211 016899999999999877654 5899999
Q ss_pred EecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEe
Q psy7538 249 LRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNL 328 (543)
Q Consensus 249 lRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni 328 (543)
++|+.|+|+...... .++............... .....+...+|+|++++.++..... ...++++++
T Consensus 173 v~PG~v~~~~~~~~~-~T~~~~~~~~~~~~~~~~---------~p~~~~~~p~dvA~~v~~l~s~~~~---~~tG~~~~v 239 (254)
T 1zmt_A 173 IGPNYLHSEDSPYFY-PTEPWKTNPEHVAHVKKV---------TALQRLGTQKELGELVAFLASGSCD---YLTGQVFWL 239 (254)
T ss_dssp EEESSBCCBTCCSSC-BHHHHTTCHHHHHHHHHH---------SSSSSCBCHHHHHHHHHHHHTTSCG---GGTTCEEEE
T ss_pred EecCccccccccccC-CCcccccChHHHHHHhcc---------CCCCCCcCHHHHHHHHHHHhCcccC---CccCCEEEE
Confidence 999999876532100 000000000111111110 0112367899999999888765332 125789998
Q ss_pred ecC
Q psy7538 329 TSN 331 (543)
Q Consensus 329 ~s~ 331 (543)
.++
T Consensus 240 dgG 242 (254)
T 1zmt_A 240 AGG 242 (254)
T ss_dssp STT
T ss_pred CCC
Confidence 876
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=1e-16 Score=162.94 Aligned_cols=179 Identities=15% Similarity=0.106 Sum_probs=119.7
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCC----CcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEP----NVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~----~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
.|+|+||||+||||++++..|++.|+ ...+|.++++... .++.+... ..+. +. .+.++ +
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~----~~~~~g~~-----~dl~-----~~--~~~~~-~ 66 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQA----MKALEGVV-----MELE-----DC--AFPLL-A 66 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGG----HHHHHHHH-----HHHH-----TT--TCTTE-E
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCc----hhhccchh-----hhhh-----cc--ccccc-C
Confidence 46899999999999999999999874 1237888887531 11211100 0010 00 11122 5
Q ss_pred cCCCCCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCc-eEEEEecCccccCCCc
Q psy7538 106 DITQLKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLK-CFTYISTAYCHPSEKV 183 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~-~~V~vST~y~~~~~~~ 183 (543)
|+.+.+ ++...++++|+|||+||..+. .++..+.++.|+.+|++++++|++..+.+ +++++|+... . ..+
T Consensus 67 di~~~~------~~~~a~~~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~-~-~~~ 138 (327)
T 1y7t_A 67 GLEATD------DPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPAN-T-NAL 138 (327)
T ss_dssp EEEEES------CHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHH-H-HHH
T ss_pred CeEecc------ChHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchh-h-hHH
Confidence 666544 567778999999999998753 34567789999999999999999972144 6777665420 0 001
Q ss_pred ccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCC
Q psy7538 184 LEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKE 260 (543)
Q Consensus 184 i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~ 260 (543)
+.++.. ++.+| . +.|+.||..+|++...+++ .|++++++||++|||+..+
T Consensus 139 ~~~~~~-~~~~p--------------------~------~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~~ 189 (327)
T 1y7t_A 139 IAYKNA-PGLNP--------------------R------NFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSS 189 (327)
T ss_dssp HHHHTC-TTSCG--------------------G------GEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSST
T ss_pred HHHHHc-CCCCh--------------------h------heeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCCC
Confidence 111100 01111 1 6899999999999888777 6999999999999998653
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=2.7e-15 Score=147.12 Aligned_cols=166 Identities=16% Similarity=0.133 Sum_probs=120.0
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHh---hCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEE
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILR---LEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVIS 104 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~---~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~ 104 (543)
+++|+++||||+|+||++++++|++ .|. +|+++.|+. ++++++. +.++... ...++.++.
T Consensus 4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~---~V~~~~r~~------~~~~~~~-----~~l~~~~---~~~~~~~~~ 66 (259)
T 1oaa_A 4 LGCAVCVLTGASRGFGRALAPQLARLLSPGS---VMLVSARSE------SMLRQLK-----EELGAQQ---PDLKVVLAA 66 (259)
T ss_dssp CBSEEEEESSCSSHHHHHHHHHHHTTBCTTC---EEEEEESCH------HHHHHHH-----HHHHHHC---TTSEEEEEE
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHhhcCCC---eEEEEeCCH------HHHHHHH-----HHHHhhC---CCCeEEEEe
Confidence 5789999999999999999999999 776 889999864 2332221 1222111 124688999
Q ss_pred ccCCCCCCCCCHHHHHHHhc---------Ccc--EEEEcCccCC-----C-----cccHHHHHHHHHHHHHHHHHHHHhc
Q psy7538 105 GDITQLKLGISEIDKKELID---------NVD--IVYHVAATIR-----F-----DEPIKTAVILNTRGTRDMLELSKQM 163 (543)
Q Consensus 105 gDl~~~~lgls~~~~~~l~~---------~vd--~ViH~AA~v~-----~-----~~~~~~~~~~Nv~gt~~ll~~a~~~ 163 (543)
+|+++++ +++.+++ .+| ++||+||... + .+.++..+++|+.|+.++++++...
T Consensus 67 ~Dv~~~~------~v~~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 140 (259)
T 1oaa_A 67 ADLGTEA------GVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNA 140 (259)
T ss_dssp CCTTSHH------HHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHT
T ss_pred cCCCCHH------HHHHHHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999875 5555442 368 9999999642 1 1446678999999999999998753
Q ss_pred -c----CCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHH
Q psy7538 164 -K----NLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAE 238 (543)
Q Consensus 164 -~----~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~ 238 (543)
. +..++|++||..+..... ....|+.||+..+.+.+.
T Consensus 141 ~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaa~~~~~~~ 182 (259)
T 1oaa_A 141 FQDSPGLSKTVVNISSLCALQPYK--------------------------------------GWGLYCAGKAARDMLYQV 182 (259)
T ss_dssp SCCCTTCEEEEEEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred HhhccCCCceEEEEcCchhcCCCC--------------------------------------CccHHHHHHHHHHHHHHH
Confidence 1 235799999986643211 016899999999999988
Q ss_pred Hhh--cCCcEEEEecCee
Q psy7538 239 CME--LGMPCMILRPSIV 254 (543)
Q Consensus 239 ~~~--~~lp~~IlRps~V 254 (543)
.+. .++.+..+.|+.|
T Consensus 183 la~e~~~i~vn~v~PG~v 200 (259)
T 1oaa_A 183 LAAEEPSVRVLSYAPGPL 200 (259)
T ss_dssp HHHHCTTEEEEEEECCSB
T ss_pred HHhhCCCceEEEecCCCc
Confidence 776 3477788888765
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.63 E-value=2.8e-15 Score=152.31 Aligned_cols=172 Identities=13% Similarity=0.122 Sum_probs=123.1
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCH-HHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTP-NQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~-~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++|+|+||||+|+||++++++|++.|. +|+++.|....... .+.++.. .. . .....++.++.+|+
T Consensus 1 ~~k~vlVTGas~GIG~ala~~L~~~G~---~v~~v~r~~~~~~~~~~~~~~~---------~~-~-~~~~~~~~~~~~Dv 66 (327)
T 1jtv_A 1 ARTVVLITGCSSGIGLHLAVRLASDPS---QSFKVYATLRDLKTQGRLWEAA---------RA-L-ACPPGSLETLQLDV 66 (327)
T ss_dssp CCEEEEESCCSSHHHHHHHHHHHTCTT---CCEEEEEEESCGGGTHHHHHHH---------HH-T-TCCTTSEEEEECCT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC---ceEEEEeecCcHHHHHHHHHHh---------hh-c-cCCCCceEEEEecC
Confidence 478999999999999999999999987 45666665433211 1111111 00 0 01124788999999
Q ss_pred CCCCCCCCHHHHHHHhcC-----ccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEEEE
Q psy7538 108 TQLKLGISEIDKKELIDN-----VDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFTYI 172 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~-----vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~v 172 (543)
++++ +++.+++. +|++||+||.... .+.++..+++|+.|+.++++++... .+..++|++
T Consensus 67 ~d~~------~v~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~i 140 (327)
T 1jtv_A 67 RDSK------SVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVT 140 (327)
T ss_dssp TCHH------HHHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCHH------HHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 9875 78877764 8999999986532 2346678999999999999987321 256899999
Q ss_pred ecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEE
Q psy7538 173 STAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMI 248 (543)
Q Consensus 173 ST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~I 248 (543)
||..+..... . ...|+.||+..|.+.+..+. .|+.+++
T Consensus 141 sS~~~~~~~~----------~----------------------------~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~ 182 (327)
T 1jtv_A 141 GSVGGLMGLP----------F----------------------------NDVYCASKFALEGLCESLAVLLLPFGVHLSL 182 (327)
T ss_dssp EEGGGTSCCT----------T----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred CCcccccCCC----------C----------------------------ChHHHHHHHHHHHHHHHHHHHhhhcCcEEEE
Confidence 9986643211 0 16899999999999877654 5899999
Q ss_pred EecCeeeecC
Q psy7538 249 LRPSIVVPIY 258 (543)
Q Consensus 249 lRps~V~G~~ 258 (543)
++|+.|..+.
T Consensus 183 v~PG~v~T~~ 192 (327)
T 1jtv_A 183 IECGPVHTAF 192 (327)
T ss_dssp EEECCBCC--
T ss_pred EEeCcccChH
Confidence 9999886653
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=99.62 E-value=7.5e-15 Score=155.43 Aligned_cols=219 Identities=13% Similarity=0.069 Sum_probs=147.8
Q ss_pred hhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 26 KTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 26 ~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
..++||+++||||+|.||.++++.|.+.|. +|+++.|+.. .+.+++..+ + .++.++.+
T Consensus 209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga---~Vvl~~r~~~----~~~l~~~~~---------~------~~~~~~~~ 266 (454)
T 3u0b_A 209 KPLDGKVAVVTGAARGIGATIAEVFARDGA---TVVAIDVDGA----AEDLKRVAD---------K------VGGTALTL 266 (454)
T ss_dssp STTTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEECGGG----HHHHHHHHH---------H------HTCEEEEC
T ss_pred cCCCCCEEEEeCCchHHHHHHHHHHHHCCC---EEEEEeCCcc----HHHHHHHHH---------H------cCCeEEEE
Confidence 446899999999999999999999999986 7888888642 233332211 0 13568899
Q ss_pred cCCCCCCCCCHHHHHHHhc--------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCc
Q psy7538 106 DITQLKLGISEIDKKELID--------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLK 167 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~--------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~ 167 (543)
|+++++ +++.+++ .+|+|||+|+.... .+.++..+++|+.|+.++.+++... .+..
T Consensus 267 Dvtd~~------~v~~~~~~~~~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g 340 (454)
T 3u0b_A 267 DVTADD------AVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGG 340 (454)
T ss_dssp CTTSTT------HHHHHHHHHHHHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTC
T ss_pred ecCCHH------HHHHHHHHHHHHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC
Confidence 999987 5655543 39999999997642 2456678999999999999999764 1457
Q ss_pred eEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cC
Q psy7538 168 CFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LG 243 (543)
Q Consensus 168 ~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~ 243 (543)
+||++||..+..... ....|+.+|+..+.+.+..+. .|
T Consensus 341 ~iV~iSS~a~~~g~~--------------------------------------g~~~YaasKaal~~l~~~la~e~~~~g 382 (454)
T 3u0b_A 341 RVIGLSSMAGIAGNR--------------------------------------GQTNYATTKAGMIGLAEALAPVLADKG 382 (454)
T ss_dssp EEEEECCHHHHHCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred EEEEEeChHhCCCCC--------------------------------------CCHHHHHHHHHHHHHHHHHHHHhhhcC
Confidence 999999985542211 016899999976666655443 68
Q ss_pred CcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCC
Q psy7538 244 MPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERK 323 (543)
Q Consensus 244 lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~ 323 (543)
+++..+.|+.|..+.....+.. ....... ......+...+|+++++..++..... -..|
T Consensus 383 I~vn~v~PG~v~T~~~~~~~~~------~~~~~~~------------~~~l~r~g~pedvA~~v~fL~s~~a~---~itG 441 (454)
T 3u0b_A 383 ITINAVAPGFIETKMTEAIPLA------TREVGRR------------LNSLFQGGQPVDVAELIAYFASPASN---AVTG 441 (454)
T ss_dssp CEEEEEEECSBCC----------------CHHHHH------------SBTTSSCBCHHHHHHHHHHHHCGGGT---TCCS
T ss_pred cEEEEEEcCcccChhhhhcchh------hHHHHHh------------hccccCCCCHHHHHHHHHHHhCCccC---CCCC
Confidence 9999999998866533211100 0000000 01122345689999999887765432 1358
Q ss_pred cEEEeecC
Q psy7538 324 SVCNLTSN 331 (543)
Q Consensus 324 ~vyni~s~ 331 (543)
+++++.++
T Consensus 442 ~~i~vdGG 449 (454)
T 3u0b_A 442 NTIRVCGQ 449 (454)
T ss_dssp CEEEESSS
T ss_pred cEEEECCc
Confidence 89998876
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=99.60 E-value=1.1e-14 Score=143.65 Aligned_cols=224 Identities=11% Similarity=0.069 Sum_probs=147.4
Q ss_pred cCCCEEEEEcC--cchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 28 YENKSIFLSGG--SGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 28 ~~~~~VlITGa--tGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
+++|+++|||| +|+||++++++|++.|. +|+++.|+.. ..++++. .....++.++.+
T Consensus 5 l~~k~vlVTGa~~s~gIG~aia~~l~~~G~---~V~~~~r~~~-----~~~~~~~-------------~~~~~~~~~~~~ 63 (269)
T 2h7i_A 5 LDGKRILVSGIITDSSIAFHIARVAQEQGA---QLVLTGFDRL-----RLIQRIT-------------DRLPAKAPLLEL 63 (269)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTC---EEEEEECSCH-----HHHHHHH-------------TTSSSCCCEEEC
T ss_pred cCCCEEEEECCCCCCchHHHHHHHHHHCCC---EEEEEecChH-----HHHHHHH-------------HhcCCCceEEEc
Confidence 67899999999 99999999999999986 7888888652 1122221 111235778999
Q ss_pred cCCCCCCCCCHHHHHHHhc----------CccEEEEcCccCC--------C----cccHHHHHHHHHHHHHHHHHHHHhc
Q psy7538 106 DITQLKLGISEIDKKELID----------NVDIVYHVAATIR--------F----DEPIKTAVILNTRGTRDMLELSKQM 163 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~----------~vd~ViH~AA~v~--------~----~~~~~~~~~~Nv~gt~~ll~~a~~~ 163 (543)
|+++++ +++.+++ ++|++||+||... + .+.++..+++|+.|+.++++++...
T Consensus 64 Dv~~~~------~v~~~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 137 (269)
T 2h7i_A 64 DVQNEE------HLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPI 137 (269)
T ss_dssp CTTCHH------HHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred cCCCHH------HHHHHHHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 999875 6666655 7999999999654 1 2345668999999999999999753
Q ss_pred -cCCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-
Q psy7538 164 -KNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME- 241 (543)
Q Consensus 164 -~~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~- 241 (543)
..-.++|++||..+.+. |. ...|+.||+..+.+.+..+.
T Consensus 138 ~~~~g~iv~iss~~~~~~-----------~~----------------------------~~~Y~asKaa~~~l~~~la~e 178 (269)
T 2h7i_A 138 MNPGGSIVGMDFDPSRAM-----------PA----------------------------YNWMTVAKSALESVNRFVARE 178 (269)
T ss_dssp EEEEEEEEEEECCCSSCC-----------TT----------------------------THHHHHHHHHHHHHHHHHHHH
T ss_pred hccCCeEEEEcCcccccc-----------Cc----------------------------hHHHHHHHHHHHHHHHHHHHH
Confidence 11258999998743211 00 16899999999998877654
Q ss_pred ---cCCcEEEEecCeeeecCCCCCCCCCCCCCchH------HHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhh
Q psy7538 242 ---LGMPCMILRPSIVVPIYKEPLPGWTDNINGPT------GLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTW 312 (543)
Q Consensus 242 ---~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~------~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~ 312 (543)
+++.+..++|+.|-.+.... +........ ......... .+ ..+.+...+|+|++++.++.
T Consensus 179 ~~~~gi~vn~v~PG~v~T~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-------~p-~~rr~~~p~dvA~~v~~L~s 247 (269)
T 2h7i_A 179 AGKYGVRSNLVAAGPIRTLAMSA---IVGGALGEEAGAQIQLLEEGWDQR-------AP-IGWNMKDATPVAKTVCALLS 247 (269)
T ss_dssp HHTTTCEEEEEEECCCCCHHHHH---HHTTTTCHHHHHHHHHHHHHHHHH-------CT-TCCCTTCCHHHHHHHHHHHS
T ss_pred hcccCcEEEEEecCcccchhhhc---cccccchhhHHHHHHHHHHhhhcc-------CC-cccCCCCHHHHHHHHHHHhC
Confidence 58999999999875431100 000000000 000001000 01 01135678999999988875
Q ss_pred hhcccCCCCCCcEEEeecC
Q psy7538 313 DFLNSKESERKSVCNLTSN 331 (543)
Q Consensus 313 ~~~~~~~~~~~~vyni~s~ 331 (543)
.... -..|+++++.++
T Consensus 248 ~~~~---~itG~~i~vdGG 263 (269)
T 2h7i_A 248 DWLP---ATTGDIIYADGG 263 (269)
T ss_dssp SSCT---TCCSEEEEESTT
T ss_pred chhc---cCcceEEEecCC
Confidence 4322 135778888765
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.60 E-value=5.3e-15 Score=145.16 Aligned_cols=167 Identities=17% Similarity=0.215 Sum_probs=120.9
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+++||||+|+||++++++|++.|+ +|+++.|+. ++++++. +.++.. ..++.++.+|+
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~------~~~~~~~-----~~~~~~-----~~~~~~~~~Dv 63 (260)
T 2qq5_A 3 MNGQVCVVTGASRGIGRGIALQLCKAGA---TVYITGRHL------DTLRVVA-----QEAQSL-----GGQCVPVVCDS 63 (260)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH-----HHHHHH-----SSEEEEEECCT
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHH-----HHHHHc-----CCceEEEECCC
Confidence 5789999999999999999999999986 788888863 2232221 112111 24688999999
Q ss_pred CCCCCCCCHHHHHHHh--------cCccEEEEcCc--cC--------CC----cccHHHHHHHHHHHHHHHHHHHHh-c-
Q psy7538 108 TQLKLGISEIDKKELI--------DNVDIVYHVAA--TI--------RF----DEPIKTAVILNTRGTRDMLELSKQ-M- 163 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~--------~~vd~ViH~AA--~v--------~~----~~~~~~~~~~Nv~gt~~ll~~a~~-~- 163 (543)
++++ +++.++ ..+|++||+|+ .. .+ .+.++..+++|+.|+.++.+++.. +
T Consensus 64 ~~~~------~v~~~~~~~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 137 (260)
T 2qq5_A 64 SQES------EVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMV 137 (260)
T ss_dssp TSHH------HHHHHHHHHHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHG
T ss_pred CCHH------HHHHHHHHHHHhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHh
Confidence 9875 554443 35799999994 21 11 244667889999999888777643 1
Q ss_pred -cCCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-
Q psy7538 164 -KNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME- 241 (543)
Q Consensus 164 -~~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~- 241 (543)
.+..++|++||..+.... +. ..|+.||+..|.+.+..+.
T Consensus 138 ~~~~g~iv~isS~~~~~~~----------~~-----------------------------~~Y~asK~a~~~~~~~la~e 178 (260)
T 2qq5_A 138 PAGQGLIVVISSPGSLQYM----------FN-----------------------------VPYGVGKAACDKLAADCAHE 178 (260)
T ss_dssp GGTCCEEEEECCGGGTSCC----------SS-----------------------------HHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCcEEEEEcChhhcCCC----------CC-----------------------------CchHHHHHHHHHHHHHHHHH
Confidence 245799999998654210 11 5899999999999877653
Q ss_pred ---cCCcEEEEecCeeeecC
Q psy7538 242 ---LGMPCMILRPSIVVPIY 258 (543)
Q Consensus 242 ---~~lp~~IlRps~V~G~~ 258 (543)
+|+++.+++|+.|..+.
T Consensus 179 ~~~~gi~v~~v~PG~v~T~~ 198 (260)
T 2qq5_A 179 LRRHGVSCVSLWPGIVQTEL 198 (260)
T ss_dssp HGGGTCEEEEEECCCSCTTT
T ss_pred hccCCeEEEEEecCccccHH
Confidence 58999999999886553
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=1.3e-14 Score=146.69 Aligned_cols=211 Identities=13% Similarity=0.204 Sum_probs=138.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCC----CCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEE
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKK----GKTPNQRVEELFESPVFDALKTLRGKSILQKIQVI 103 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~----~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i 103 (543)
++||+++||||+|+||++++++|++.|+ +|++..|... +.+ .+++++.. +.++... .. +
T Consensus 7 l~gk~~lVTGas~GIG~~~a~~La~~Ga---~Vv~~~~~~~~~~~~R~-~~~~~~~~-----~~l~~~~-----~~---~ 69 (319)
T 1gz6_A 7 FDGRVVLVTGAGGGLGRAYALAFAERGA---LVVVNDLGGDFKGVGKG-SSAADKVV-----EEIRRRG-----GK---A 69 (319)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEECCCBCTTSCBCC-SHHHHHHH-----HHHHHTT-----CE---E
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEcCCcccccccCC-HHHHHHHH-----HHHHhhC-----Ce---E
Confidence 5789999999999999999999999987 7888765321 000 12222211 1122111 11 2
Q ss_pred EccCCCCCCCCCHHHHHHHh-------cCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCC
Q psy7538 104 SGDITQLKLGISEIDKKELI-------DNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNL 166 (543)
Q Consensus 104 ~gDl~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l 166 (543)
.+|+++.+ +++.++ .++|++||+||.... .+.++..+++|+.|+.++++++... .+.
T Consensus 70 ~~D~~~~~------~~~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~ 143 (319)
T 1gz6_A 70 VANYDSVE------AGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNY 143 (319)
T ss_dssp EEECCCGG------GHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEeCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence 47888875 444332 369999999997542 2346678999999999998887431 256
Q ss_pred ceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----c
Q psy7538 167 KCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----L 242 (543)
Q Consensus 167 ~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~ 242 (543)
.++|++||..+..... + ...|+.||+..+.+.+..+. .
T Consensus 144 grIV~vsS~~~~~~~~---------~-----------------------------~~~Y~aSK~a~~~~~~~la~el~~~ 185 (319)
T 1gz6_A 144 GRIIMTASASGIYGNF---------G-----------------------------QANYSAAKLGLLGLANTLVIEGRKN 185 (319)
T ss_dssp EEEEEECCHHHHHCCT---------T-----------------------------CHHHHHHHHHHHHHHHHHHHHTGGG
T ss_pred CEEEEECChhhccCCC---------C-----------------------------CHHHHHHHHHHHHHHHHHHHHhccc
Confidence 7999999974422110 0 16899999999998877654 5
Q ss_pred CCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCC
Q psy7538 243 GMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322 (543)
Q Consensus 243 ~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~ 322 (543)
|+.+.+++|+.+ .+.. .... +. ...+++..+|+|.+++.++..... ..
T Consensus 186 gI~vn~v~PG~~-t~~~-------~~~~-~~-------------------~~~~~~~p~dvA~~~~~l~s~~~~----~t 233 (319)
T 1gz6_A 186 NIHCNTIAPNAG-SRMT-------ETVM-PE-------------------DLVEALKPEYVAPLVLWLCHESCE----EN 233 (319)
T ss_dssp TEEEEEEEEECC-STTT-------GGGS-CH-------------------HHHHHSCGGGTHHHHHHHTSTTCC----CC
T ss_pred CEEEEEEeCCCc-cccc-------cccC-Ch-------------------hhhccCCHHHHHHHHHHHhCchhh----cC
Confidence 899999999876 2110 0000 00 112345788999998888765322 35
Q ss_pred CcEEEeecC
Q psy7538 323 KSVCNLTSN 331 (543)
Q Consensus 323 ~~vyni~s~ 331 (543)
+++|++.++
T Consensus 234 G~~~~v~GG 242 (319)
T 1gz6_A 234 GGLFEVGAG 242 (319)
T ss_dssp SCEEEEETT
T ss_pred CCEEEECCC
Confidence 788888765
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.57 E-value=2e-14 Score=139.71 Aligned_cols=218 Identities=8% Similarity=-0.010 Sum_probs=135.4
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEE-e--cCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLL-M--RTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l-~--R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
||+++||||+|+||++++++|++.|+ +|+++ . |+. ++++++.+ . . .+..+. |
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~~~~r~~------~~~~~~~~-----~--------~-~~~~~~--~ 55 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGY---TVVCHDASFADA------AERQRFES-----E--------N-PGTIAL--A 55 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTC---EEEECCGGGGSH------HHHHHHHH-----H--------S-TTEEEC--C
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC---EEEEecCCcCCH------HHHHHHHH-----H--------h-CCCccc--C
Confidence 58999999999999999999999987 78888 5 763 23332211 0 0 111221 2
Q ss_pred CCCCCCCCCHHHHHHHh---cCccEEEEcCccCCC----------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 107 ITQLKLGISEIDKKELI---DNVDIVYHVAATIRF----------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~---~~vd~ViH~AA~v~~----------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
..+-. +.++.+. .++|++||+||.... .+.++..+++|+.|+.++++++... .+..++|
T Consensus 56 ~~~v~-----~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv 130 (244)
T 1zmo_A 56 EQKPE-----RLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVI 130 (244)
T ss_dssp CCCGG-----GHHHHHGGGSSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHH-----HHHHHHHHHcCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEE
Confidence 22211 1223332 368999999996543 1446678999999999999888531 2457999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... ....|+.||+..+.+.+..+. +++.+
T Consensus 131 ~isS~~~~~~~~--------------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v 172 (244)
T 1zmo_A 131 FITSSVGKKPLA--------------------------------------YNPLYGPARAATVALVESAAKTLSRDGILL 172 (244)
T ss_dssp EECCGGGTSCCT--------------------------------------TCTTHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred EECChhhCCCCC--------------------------------------CchHHHHHHHHHHHHHHHHHHHHhhcCcEE
Confidence 999986643211 016899999999998877654 58999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
.+++|+.|-.+.... | +....+ ......... .....-+...+|+|++++.++..... ...|+++
T Consensus 173 ~~v~PG~v~T~~~~~---~-~~~~~~-~~~~~~~~~--------~~p~~r~~~pe~vA~~v~~l~s~~~~---~~tG~~i 236 (244)
T 1zmo_A 173 YAIGPNFFNNPTYFP---T-SDWENN-PELRERVDR--------DVPLGRLGRPDEMGALITFLASRRAA---PIVGQFF 236 (244)
T ss_dssp EEEEESSBCBTTTBC---H-HHHHHC-HHHHHHHHH--------HCTTCSCBCHHHHHHHHHHHHTTTTG---GGTTCEE
T ss_pred EEEeeCCCcCCcccc---c-ccccch-HHHHHHHhc--------CCCCCCCcCHHHHHHHHHHHcCcccc---CccCCEE
Confidence 999999875542100 0 000000 011111100 00112367889999999888765332 1247788
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
.+.++
T Consensus 237 ~vdgG 241 (244)
T 1zmo_A 237 AFTGG 241 (244)
T ss_dssp EESTT
T ss_pred EeCCC
Confidence 87765
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=3.2e-13 Score=130.87 Aligned_cols=208 Identities=13% Similarity=0.152 Sum_probs=145.6
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+|+|+||||++-||++++++|++.|. +|.+..|.. ++++++ .....++..+.+|+++
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga---~V~~~~~~~------~~~~~~--------------~~~~~~~~~~~~Dv~~ 58 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGD---KVCFIDIDE------KRSADF--------------AKERPNLFYFHGDVAD 58 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHH--------------HTTCTTEEEEECCTTS
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHH--------------HHhcCCEEEEEecCCC
Confidence 48999999999999999999999997 888888863 344433 1223578899999998
Q ss_pred CCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc--cCCceEEEEe
Q psy7538 110 LKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM--KNLKCFTYIS 173 (543)
Q Consensus 110 ~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~l~~~V~vS 173 (543)
++ +++.+++ ++|++||+||.... .+.++..+++|+.|+..+.+++... ++-.++|++|
T Consensus 59 ~~------~v~~~v~~~~~~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInis 132 (247)
T 3ged_A 59 PL------TLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIA 132 (247)
T ss_dssp HH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEe
Confidence 75 5665543 68999999986542 2557788999999999888877542 1226999999
Q ss_pred cCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh---cCCcEEEEe
Q psy7538 174 TAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME---LGMPCMILR 250 (543)
Q Consensus 174 T~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~---~~lp~~IlR 250 (543)
|..+..... . ...|+.||+..+.+.+..+. .++.+..+-
T Consensus 133 S~~~~~~~~----------~----------------------------~~~Y~asKaal~~ltk~lA~ela~~IrVN~I~ 174 (247)
T 3ged_A 133 STRAFQSEP----------D----------------------------SEAYASAKGGIVALTHALAMSLGPDVLVNCIA 174 (247)
T ss_dssp CGGGTSCCT----------T----------------------------CHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEE
T ss_pred ecccccCCC----------C----------------------------CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEe
Confidence 986643211 0 15899999988888776554 489999999
Q ss_pred cCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeec
Q psy7538 251 PSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTS 330 (543)
Q Consensus 251 ps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s 330 (543)
|+.|-.+..+. +........+ ..-+...+|+|++++.++.... ..|++..+.+
T Consensus 175 PG~i~t~~~~~-------------~~~~~~~~~P---------l~R~g~pediA~~v~fL~s~~~-----iTG~~i~VDG 227 (247)
T 3ged_A 175 PGWINVTEQQE-------------FTQEDCAAIP---------AGKVGTPKDISNMVLFLCQQDF-----ITGETIIVDG 227 (247)
T ss_dssp ECSBCCCC----------------CCHHHHHTST---------TSSCBCHHHHHHHHHHHHHCSS-----CCSCEEEEST
T ss_pred cCcCCCCCcHH-------------HHHHHHhcCC---------CCCCcCHHHHHHHHHHHHhCCC-----CCCCeEEECc
Confidence 98774332211 1111111111 1123467999999988875432 3688999887
Q ss_pred C
Q psy7538 331 N 331 (543)
Q Consensus 331 ~ 331 (543)
|
T Consensus 228 G 228 (247)
T 3ged_A 228 G 228 (247)
T ss_dssp T
T ss_pred C
Confidence 6
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=1e-13 Score=135.55 Aligned_cols=226 Identities=11% Similarity=0.096 Sum_probs=150.5
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||++-||+.++++|.+.|. +|.+..|..... +.++++ . ....++.++.+|+
T Consensus 5 L~gKvalVTGas~GIG~aia~~la~~Ga---~Vv~~~r~~~~~---~~~~~~---------~-----~~~~~~~~~~~Dv 64 (258)
T 4gkb_A 5 LQDKVVIVTGGASGIGGAISMRLAEERA---IPVVFARHAPDG---AFLDAL---------A-----QRQPRATYLPVEL 64 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCCCH---HHHHHH---------H-----HHCTTCEEEECCT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCC---EEEEEECCcccH---HHHHHH---------H-----hcCCCEEEEEeec
Confidence 6899999999999999999999999986 888999986542 222222 1 1224788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC------cccHHHHHHHHHHHHHHHHHHHHhc--cCCceEEEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF------DEPIKTAVILNTRGTRDMLELSKQM--KNLKCFTYI 172 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~l~~~V~v 172 (543)
++++ +++.+++ .+|+++|+||.... .+.++..+++|+.|+..+.+++..+ .+-.++|++
T Consensus 65 ~~~~------~v~~~v~~~~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVni 138 (258)
T 4gkb_A 65 QDDA------QCRDAVAQTIATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNI 138 (258)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEE
Confidence 9875 5555543 68999999996431 2456778999999999888877542 112689999
Q ss_pred ecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEE
Q psy7538 173 STAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMI 248 (543)
Q Consensus 173 ST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~I 248 (543)
||..+..... ....|+.||+..+.+.+..+. +|+.+..
T Consensus 139 sS~~~~~~~~--------------------------------------~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~ 180 (258)
T 4gkb_A 139 SSKTAVTGQG--------------------------------------NTSGYCASKGAQLALTREWAVALREHGVRVNA 180 (258)
T ss_dssp CCTHHHHCCS--------------------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEE
T ss_pred eehhhccCCC--------------------------------------CchHHHHHHHHHHHHHHHHHHHhcccCeEEEE
Confidence 9996643211 015899999988888876554 6899999
Q ss_pred EecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEe
Q psy7538 249 LRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNL 328 (543)
Q Consensus 249 lRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni 328 (543)
+.|+.|-.+..+ .|......+...........+ ...-+...+|+|++++.++..... -..|+++.+
T Consensus 181 V~PG~i~T~~~~---~~~~~~~~~~~~~~~~~~~~p--------lg~R~g~peeiA~~v~fLaS~~a~---~iTG~~i~V 246 (258)
T 4gkb_A 181 VIPAEVMTPLYR---NWIATFEDPEAKLAEIAAKVP--------LGRRFTTPDEIADTAVFLLSPRAS---HTTGEWLFV 246 (258)
T ss_dssp EEECSBCCSCC--------------CHHHHHHTTCT--------TTTSCBCHHHHHHHHHHHHSGGGT---TCCSCEEEE
T ss_pred EecCCCCChhHh---hhhhcccChHHHHHHHHhcCC--------CCCCCcCHHHHHHHHHHHhCchhc---CccCCeEEE
Confidence 999988554322 111111111112222222111 001245679999998887755432 135888988
Q ss_pred ecC
Q psy7538 329 TSN 331 (543)
Q Consensus 329 ~s~ 331 (543)
.+|
T Consensus 247 DGG 249 (258)
T 4gkb_A 247 DGG 249 (258)
T ss_dssp STT
T ss_pred CCC
Confidence 776
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=3e-14 Score=151.86 Aligned_cols=168 Identities=14% Similarity=0.213 Sum_probs=128.5
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+++++||||+|.||.+++++|.+.|. .+|.++.|+.......+.+.+. + .....++.++.+|+++
T Consensus 239 ~~~vLITGgsgGIG~alA~~La~~Ga--~~vvl~~R~~~~~~~~~~l~~~--------l-----~~~g~~v~~~~~Dvtd 303 (496)
T 3mje_A 239 HGSVLVTGGTGGIGGRVARRLAEQGA--AHLVLTSRRGADAPGAAELRAE--------L-----EQLGVRVTIAACDAAD 303 (496)
T ss_dssp CSEEEEETCSSHHHHHHHHHHHHTTC--SEEEEEESSGGGSTTHHHHHHH--------H-----HHTTCEEEEEECCTTC
T ss_pred CCEEEEECCCCchHHHHHHHHHHCCC--cEEEEEeCCCCChHHHHHHHHH--------H-----HhcCCeEEEEEccCCC
Confidence 48999999999999999999999975 4788888875433222222211 1 1223579999999998
Q ss_pred CCCCCCHHHHHHHhc------CccEEEEcCccC-CC-------cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecC
Q psy7538 110 LKLGISEIDKKELID------NVDIVYHVAATI-RF-------DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTA 175 (543)
Q Consensus 110 ~~lgls~~~~~~l~~------~vd~ViH~AA~v-~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~ 175 (543)
++ +++.+++ .+|+|||+||.. .. .+.++..+++|+.|+.++.+++... .+.+||++||.
T Consensus 304 ~~------~v~~~~~~i~~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~-~~~~iV~~SS~ 376 (496)
T 3mje_A 304 RE------ALAALLAELPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL-DLDAFVLFSSG 376 (496)
T ss_dssp HH------HHHHHHHTCCTTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS-CCSEEEEEEEH
T ss_pred HH------HHHHHHHHHHHhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc-CCCEEEEEeCh
Confidence 75 7777775 379999999976 21 2346678999999999999999887 78899999998
Q ss_pred ccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeee
Q psy7538 176 YCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVV 255 (543)
Q Consensus 176 y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~ 255 (543)
.+...... ...|+.+|+..+.+..+....|++++.+.|+.+.
T Consensus 377 a~~~g~~g--------------------------------------~~~YaAaKa~ldala~~~~~~Gi~v~sV~pG~w~ 418 (496)
T 3mje_A 377 AAVWGSGG--------------------------------------QPGYAAANAYLDALAEHRRSLGLTASSVAWGTWG 418 (496)
T ss_dssp HHHTTCTT--------------------------------------CHHHHHHHHHHHHHHHHHHHTTCCCEEEEECEES
T ss_pred HhcCCCCC--------------------------------------cHHHHHHHHHHHHHHHHHHhcCCeEEEEECCccc
Confidence 55322110 1689999999999888766579999999999875
Q ss_pred ec
Q psy7538 256 PI 257 (543)
Q Consensus 256 G~ 257 (543)
++
T Consensus 419 ~~ 420 (496)
T 3mje_A 419 EV 420 (496)
T ss_dssp SS
T ss_pred CC
Confidence 54
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.54 E-value=6.3e-13 Score=129.36 Aligned_cols=224 Identities=12% Similarity=0.116 Sum_probs=150.5
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||++-||++++++|.+.|. +|.+..|+. +++++.. +.++ ....++.++.+|+
T Consensus 5 L~gKvalVTGas~GIG~aiA~~la~~Ga---~Vv~~~~~~------~~~~~~~-----~~i~-----~~g~~~~~~~~Dv 65 (254)
T 4fn4_A 5 LKNKVVIVTGAGSGIGRAIAKKFALNDS---IVVAVELLE------DRLNQIV-----QELR-----GMGKEVLGVKADV 65 (254)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH-----HHHH-----HTTCCEEEEECCT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCC---EEEEEECCH------HHHHHHH-----HHHH-----hcCCcEEEEEccC
Confidence 5899999999999999999999999986 788888863 3343321 1222 2235788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCC----C----cccHHHHHHHHHHHHHHHHHHHHhc---cCCceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIR----F----DEPIKTAVILNTRGTRDMLELSKQM---KNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~ 169 (543)
++++ +++.+++ ++|+++|+||... + .+.++..+++|+.|+..+.+++... .+-.++
T Consensus 66 t~~~------~v~~~~~~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~I 139 (254)
T 4fn4_A 66 SKKK------DVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVI 139 (254)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEE
Confidence 9986 6666553 6899999999542 2 2456778999999999888877542 244699
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+..... ....|+.||+....+.+..+. +|+.
T Consensus 140 VnisS~~g~~~~~--------------------------------------~~~~Y~asKaal~~ltr~lA~ela~~gIr 181 (254)
T 4fn4_A 140 VNTASIAGIRGGF--------------------------------------AGAPYTVAKHGLIGLTRSIAAHYGDQGIR 181 (254)
T ss_dssp EEECCGGGTCSSS--------------------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred EEEechhhcCCCC--------------------------------------CChHHHHHHHHHHHHHHHHHHHhhhhCeE
Confidence 9999987643211 015899999988887776554 6899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
+..+-|+.|-.+.... .............+... + ..-+...+|+|++++.++..... -..|++
T Consensus 182 VN~V~PG~i~T~~~~~------~~~~~~~~~~~~~~~~~------~--~~R~g~pediA~~v~fLaSd~a~---~iTG~~ 244 (254)
T 4fn4_A 182 AVAVLPGTVKTNIGLG------SSKPSELGMRTLTKLMS------L--SSRLAEPEDIANVIVFLASDEAS---FVNGDA 244 (254)
T ss_dssp EEEEEECSBCSSCTTS------CSSCCHHHHHHHHHHHT------T--CCCCBCHHHHHHHHHHHHSGGGT---TCCSCE
T ss_pred EEEEEeCCCCCccccc------ccCCcHHHHHHHHhcCC------C--CCCCcCHHHHHHHHHHHhCchhc---CCcCCE
Confidence 9999999885442211 11111111111111000 0 01134578999998887765432 135888
Q ss_pred EEeecC
Q psy7538 326 CNLTSN 331 (543)
Q Consensus 326 yni~s~ 331 (543)
+.+.+|
T Consensus 245 i~VDGG 250 (254)
T 4fn4_A 245 VVVDGG 250 (254)
T ss_dssp EEESTT
T ss_pred EEeCCC
Confidence 888766
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.53 E-value=7.3e-14 Score=136.08 Aligned_cols=222 Identities=11% Similarity=0.042 Sum_probs=149.9
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||++-||+.++++|.+.|. +|.+..|+. +++++.. +.++. ...++..+.+|+
T Consensus 7 L~gKvalVTGas~GIG~aia~~la~~Ga---~Vvi~~~~~------~~~~~~~-----~~l~~-----~g~~~~~~~~Dv 67 (255)
T 4g81_D 7 LTGKTALVTGSARGLGFAYAEGLAAAGA---RVILNDIRA------TLLAESV-----DTLTR-----KGYDAHGVAFDV 67 (255)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEECCSCH------HHHHHHH-----HHHHH-----TTCCEEECCCCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHH-----HHHHh-----cCCcEEEEEeeC
Confidence 5899999999999999999999999996 888888853 3333221 12222 235788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHh-c---cCCceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQ-M---KNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-~---~~l~~~ 169 (543)
++++ +++.+++ ++|+++|+||.... .+.++..+++|+.|+..+.+.+.. + ++-.++
T Consensus 68 ~~~~------~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~I 141 (255)
T 4g81_D 68 TDEL------AIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKI 141 (255)
T ss_dssp TCHH------HHHHHHHHHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CCHH------HHHHHHHHHHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEE
Confidence 9976 6665543 58999999997542 355777899999999998887643 2 234699
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+..... ....|+.||+..+.+.+..+. +|+.
T Consensus 142 VnisS~~~~~~~~--------------------------------------~~~~Y~asKaal~~ltr~lA~ela~~gIr 183 (255)
T 4g81_D 142 INIGSLTSQAARP--------------------------------------TVAPYTAAKGGIKMLTCSMAAEWAQFNIQ 183 (255)
T ss_dssp EEECCGGGTSBCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred EEEeehhhcCCCC--------------------------------------CchhHHHHHHHHHHHHHHHHHHhcccCeE
Confidence 9999987643211 015899999988888776554 6899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
+..+-|+.|-.+..+.. .........+....+ ..-+...+|+|++++.++..... -..|++
T Consensus 184 VN~V~PG~i~T~~~~~~-------~~~~~~~~~~~~~~P---------l~R~g~pediA~~v~fL~S~~a~---~iTG~~ 244 (255)
T 4g81_D 184 TNAIGPGYILTDMNTAL-------IEDKQFDSWVKSSTP---------SQRWGRPEELIGTAIFLSSKASD---YINGQI 244 (255)
T ss_dssp EEEEEECSBCCGGGHHH-------HTCHHHHHHHHHHST---------TCSCBCGGGGHHHHHHHHSGGGT---TCCSCE
T ss_pred EEEEeeCCCCCchhhcc-------cCCHHHHHHHHhCCC---------CCCCcCHHHHHHHHHHHhCchhC---CCcCCE
Confidence 99999998855432110 000111122211111 01134467899998877754432 135788
Q ss_pred EEeecC
Q psy7538 326 CNLTSN 331 (543)
Q Consensus 326 yni~s~ 331 (543)
+.+.+|
T Consensus 245 i~VDGG 250 (255)
T 4g81_D 245 IYVDGG 250 (255)
T ss_dssp EEESTT
T ss_pred EEECCC
Confidence 888765
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.53 E-value=4e-13 Score=129.76 Aligned_cols=220 Identities=11% Similarity=0.083 Sum_probs=149.5
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||++-||+.+++.|.+.|. +|.+..|... ++..+.+ .....++..+.+|+
T Consensus 7 L~GKvalVTGas~GIG~aiA~~la~~Ga---~Vvi~~r~~~----~~~~~~~--------------~~~g~~~~~~~~Dv 65 (247)
T 4hp8_A 7 LEGRKALVTGANTGLGQAIAVGLAAAGA---EVVCAARRAP----DETLDII--------------AKDGGNASALLIDF 65 (247)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSCC----HHHHHHH--------------HHTTCCEEEEECCT
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHcCC---EEEEEeCCcH----HHHHHHH--------------HHhCCcEEEEEccC
Confidence 6899999999999999999999999996 7888888643 2222221 11235788999999
Q ss_pred CCCCCCCCHHHHHHHhc--CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHh-c---cCCceEEEEec
Q psy7538 108 TQLKLGISEIDKKELID--NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQ-M---KNLKCFTYIST 174 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~--~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-~---~~l~~~V~vST 174 (543)
++++ +.+.+++ ++|+++|+||.... .+.++..+++|+.|+..+.+++.. | ++-.++|++||
T Consensus 66 ~d~~------~v~~~~~~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS 139 (247)
T 4hp8_A 66 ADPL------AAKDSFTDAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIAS 139 (247)
T ss_dssp TSTT------TTTTSSTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred CCHH------HHHHHHHhCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEec
Confidence 9986 4444443 58999999997542 355778999999999999887543 3 12468999999
Q ss_pred CccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEEEe
Q psy7538 175 AYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMILR 250 (543)
Q Consensus 175 ~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~IlR 250 (543)
..+...... ...|+.||+....+.+..+. +|+.+..+-
T Consensus 140 ~~~~~g~~~--------------------------------------~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~ 181 (247)
T 4hp8_A 140 LLSFQGGIR--------------------------------------VPSYTAAKHGVAGLTKLLANEWAAKGINVNAIA 181 (247)
T ss_dssp GGGTSCCSS--------------------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred hhhCCCCCC--------------------------------------ChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEe
Confidence 866432110 15899999988888776544 689999999
Q ss_pred cCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeec
Q psy7538 251 PSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTS 330 (543)
Q Consensus 251 ps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s 330 (543)
|+.|-.+..+.. .........+....+ ..-+-..+|+|++++.++..... -..|+++.+.+
T Consensus 182 PG~i~T~~~~~~-------~~~~~~~~~~~~~~P---------lgR~g~peeiA~~v~fLaSd~a~---~iTG~~i~VDG 242 (247)
T 4hp8_A 182 PGYIETNNTEAL-------RADAARNKAILERIP---------AGRWGHSEDIAGAAVFLSSAAAD---YVHGAILNVDG 242 (247)
T ss_dssp ECSBCSGGGHHH-------HTSHHHHHHHHTTCT---------TSSCBCTHHHHHHHHHHTSGGGT---TCCSCEEEEST
T ss_pred eCCCCCcchhhc-------ccCHHHHHHHHhCCC---------CCCCcCHHHHHHHHHHHhCchhc---CCcCCeEEECc
Confidence 998754422110 000111222222211 11234568999998888765432 13578888876
Q ss_pred C
Q psy7538 331 N 331 (543)
Q Consensus 331 ~ 331 (543)
|
T Consensus 243 G 243 (247)
T 4hp8_A 243 G 243 (247)
T ss_dssp T
T ss_pred c
Confidence 5
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=99.52 E-value=8.6e-14 Score=149.87 Aligned_cols=227 Identities=10% Similarity=0.037 Sum_probs=152.2
Q ss_pred hhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEE-ecCCCC----------CCHHHHHHHHhcCchhHHHHhhcCc
Q psy7538 26 KTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLL-MRTKKG----------KTPNQRVEELFESPVFDALKTLRGK 94 (543)
Q Consensus 26 ~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l-~R~~~~----------~~~~~rl~~~~~~~~f~~l~~~~~~ 94 (543)
.+-.+++++||||+|.||.+++++|.+.|. ..|.++ .|+... ....+.+ .+.|.
T Consensus 247 ~~~~~~~vLITGgsgGIG~~lA~~La~~G~--~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~--------~~~l~----- 311 (525)
T 3qp9_A 247 WWQADGTVLVTGAEEPAAAEAARRLARDGA--GHLLLHTTPSGSEGAEGTSGAAEDSGLAGL--------VAELA----- 311 (525)
T ss_dssp SSCTTSEEEESSTTSHHHHHHHHHHHHHTC--CEEEEEECCCC---------------CHHH--------HHHHH-----
T ss_pred eecCCCEEEEECCCCcHHHHHHHHHHHcCC--CEEEEEeCCCCCCccccccccccCHHHHHH--------HHHHH-----
Confidence 466789999999999999999999999986 346666 787432 1111111 11121
Q ss_pred CCCCceEEEEccCCCCCCCCCHHHHHHHhcC------ccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHH
Q psy7538 95 SILQKIQVISGDITQLKLGISEIDKKELIDN------VDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSK 161 (543)
Q Consensus 95 ~~~~~v~~i~gDl~~~~lgls~~~~~~l~~~------vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 161 (543)
....++.++.+|+++++ +++.+++. +|+|||+||.... .+.++..+++|+.|+.++.+++.
T Consensus 312 ~~g~~v~~~~~Dvtd~~------~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~ 385 (525)
T 3qp9_A 312 DLGATATVVTCDLTDAE------AAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLR 385 (525)
T ss_dssp HHTCEEEEEECCTTSHH------HHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCEEEEEECCCCCHH------HHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 12357899999999976 78877764 6999999997642 24466789999999999999998
Q ss_pred hccC----CceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHH
Q psy7538 162 QMKN----LKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVA 237 (543)
Q Consensus 162 ~~~~----l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~ 237 (543)
.... ..+||++||..+...... ...|+.+|+..+.+..
T Consensus 386 ~~~~~~~~~~~iV~~SS~a~~~g~~g--------------------------------------~~~YaaaKa~l~~lA~ 427 (525)
T 3qp9_A 386 EAAAAGGRPPVLVLFSSVAAIWGGAG--------------------------------------QGAYAAGTAFLDALAG 427 (525)
T ss_dssp HTC----CCCEEEEEEEGGGTTCCTT--------------------------------------CHHHHHHHHHHHHHHT
T ss_pred cccccCCCCCEEEEECCHHHcCCCCC--------------------------------------CHHHHHHHHHHHHHHH
Confidence 7621 789999999866432110 1689999999998866
Q ss_pred HHhhcCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhccc
Q psy7538 238 ECMELGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNS 317 (543)
Q Consensus 238 ~~~~~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~ 317 (543)
+....|++++.+.|+.+ .+. .... . .....+.. .....+..+++++++..++.....
T Consensus 428 ~~~~~gi~v~sI~pG~~-~tg------m~~~---~-~~~~~~~~-----------~g~~~l~pee~a~~l~~~l~~~~~- 484 (525)
T 3qp9_A 428 QHRADGPTVTSVAWSPW-EGS------RVTE---G-ATGERLRR-----------LGLRPLAPATALTALDTALGHGDT- 484 (525)
T ss_dssp SCCSSCCEEEEEEECCB-TTS------GGGS---S-HHHHHHHH-----------TTBCCBCHHHHHHHHHHHHHHTCS-
T ss_pred HHHhCCCCEEEEECCcc-ccc------cccc---h-hhHHHHHh-----------cCCCCCCHHHHHHHHHHHHhCCCC-
Confidence 55447999999999977 221 1100 0 11111111 112347789999999988876543
Q ss_pred CCCCCCcEEEeecCCCCcccHHHHHHHHh
Q psy7538 318 KESERKSVCNLTSNKDYKITWQEICDIGK 346 (543)
Q Consensus 318 ~~~~~~~vyni~s~~~~~~t~~e~~~~i~ 346 (543)
.. +.. .+.|..+.....
T Consensus 485 -------~v-~v~----~~dw~~~~~~~~ 501 (525)
T 3qp9_A 485 -------AV-TIA----DVDWSSFAPGFT 501 (525)
T ss_dssp -------EE-EEC----CBCHHHHHHHHH
T ss_pred -------eE-EEE----eCCHHHHHhhcc
Confidence 12 222 367777766544
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.52 E-value=2.3e-13 Score=133.78 Aligned_cols=227 Identities=13% Similarity=0.123 Sum_probs=151.4
Q ss_pred hhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEE
Q psy7538 24 IAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVI 103 (543)
Q Consensus 24 i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i 103 (543)
+.+-++||+++||||++-||+.++++|++.|. +|++..|+. +++++..+ ....+...+
T Consensus 23 Ms~rL~gKvalVTGas~GIG~aiA~~la~~Ga---~V~i~~r~~------~~l~~~~~-------------~~g~~~~~~ 80 (273)
T 4fgs_A 23 MTQRLNAKIAVITGATSGIGLAAAKRFVAEGA---RVFITGRRK------DVLDAAIA-------------EIGGGAVGI 80 (273)
T ss_dssp --CTTTTCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHHH-------------HHCTTCEEE
T ss_pred hcchhCCCEEEEeCcCCHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHHH-------------HcCCCeEEE
Confidence 44558899999999999999999999999996 888999864 34433211 112467889
Q ss_pred EccCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc-cCCce
Q psy7538 104 SGDITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM-KNLKC 168 (543)
Q Consensus 104 ~gDl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~ 168 (543)
.+|+++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+..+.+++... ++-.+
T Consensus 81 ~~Dv~~~~------~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~ 154 (273)
T 4fgs_A 81 QADSANLA------ELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSS 154 (273)
T ss_dssp ECCTTCHH------HHHHHHHHHHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEE
T ss_pred EecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCe
Confidence 99999876 6665543 58999999996532 3567789999999999999988653 23358
Q ss_pred EEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCC
Q psy7538 169 FTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGM 244 (543)
Q Consensus 169 ~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~l 244 (543)
+|.+||..+..... ....|+.||+....+.+..+. +|+
T Consensus 155 IInisS~~~~~~~~--------------------------------------~~~~Y~asKaav~~ltr~lA~Ela~~gI 196 (273)
T 4fgs_A 155 VVLTGSTAGSTGTP--------------------------------------AFSVYAASKAALRSFARNWILDLKDRGI 196 (273)
T ss_dssp EEEECCGGGGSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHTTTSCE
T ss_pred EEEEeehhhccCCC--------------------------------------CchHHHHHHHHHHHHHHHHHHHhcccCe
Confidence 99999986643211 015899999999888877654 689
Q ss_pred cEEEEecCeeeecCCCCCCCCCCCCC-chHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCC
Q psy7538 245 PCMILRPSIVVPIYKEPLPGWTDNIN-GPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERK 323 (543)
Q Consensus 245 p~~IlRps~V~G~~~~p~~gw~d~~~-g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~ 323 (543)
.+..+-||.|-.+..... ..... ....+...+....+ ..-+...+|+|++++.++..... -..|
T Consensus 197 rVN~V~PG~i~T~~~~~~---~~~~~~~~~~~~~~~~~~~P---------lgR~g~peeiA~~v~FLaSd~a~---~iTG 261 (273)
T 4fgs_A 197 RINTLSPGPTETTGLVEL---AGKDPVQQQGLLNALAAQVP---------MGRVGRAEEVAAAALFLASDDSS---FVTG 261 (273)
T ss_dssp EEEEEEECSBCC------------CHHHHHHHHHHHHHHST---------TSSCBCHHHHHHHHHHHHSGGGT---TCCS
T ss_pred EEEEEeeCCCCChhHHHh---hccCchhhHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCchhc---CccC
Confidence 999999998754422110 00000 00112222222111 01134578999999888755432 1357
Q ss_pred cEEEeecC
Q psy7538 324 SVCNLTSN 331 (543)
Q Consensus 324 ~vyni~s~ 331 (543)
++..+.+|
T Consensus 262 ~~i~VDGG 269 (273)
T 4fgs_A 262 AELFVDGG 269 (273)
T ss_dssp CEEEESTT
T ss_pred CeEeECcC
Confidence 88888766
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=99.51 E-value=1.4e-12 Score=127.67 Aligned_cols=223 Identities=13% Similarity=0.066 Sum_probs=149.4
Q ss_pred cCCCEEEEEcCcc--hhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 28 YENKSIFLSGGSG--FLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 28 ~~~~~VlITGatG--FiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
++||+++||||+| -||++++++|.+.|. +|.+..|+... .+.+.+.++ .....++.++.+
T Consensus 4 l~gK~alVTGaa~~~GIG~aiA~~la~~Ga---~Vvi~~r~~~~---~~~~~~~~~------------~~~~~~~~~~~~ 65 (256)
T 4fs3_A 4 LENKTYVIMGIANKRSIAFGVAKVLDQLGA---KLVFTYRKERS---RKELEKLLE------------QLNQPEAHLYQI 65 (256)
T ss_dssp CTTCEEEEECCCSTTCHHHHHHHHHHHTTC---EEEEEESSGGG---HHHHHHHHG------------GGTCSSCEEEEC
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHHHHH------------hcCCCcEEEEEc
Confidence 5899999999987 799999999999996 88889987532 233333221 112246889999
Q ss_pred cCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------c----ccHHHHHHHHHHHHHHHHHHHHhc-cCC
Q psy7538 106 DITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------D----EPIKTAVILNTRGTRDMLELSKQM-KNL 166 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~----~~~~~~~~~Nv~gt~~ll~~a~~~-~~l 166 (543)
|+++++ +++.+++ ++|+++|+||.... . +.+...+++|+.++..+...+... ++-
T Consensus 66 Dv~~~~------~v~~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~ 139 (256)
T 4fs3_A 66 DVQSDE------EVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEG 139 (256)
T ss_dssp CTTCHH------HHHHHHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTC
T ss_pred cCCCHH------HHHHHHHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 999875 5555543 68999999996432 1 234456788999998888877653 233
Q ss_pred ceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----c
Q psy7538 167 KCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----L 242 (543)
Q Consensus 167 ~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~ 242 (543)
.++|++||..+..... ....|+.||+..+.+.+..+. +
T Consensus 140 G~IVnisS~~~~~~~~--------------------------------------~~~~Y~asKaal~~ltr~lA~Ela~~ 181 (256)
T 4fs3_A 140 GSIVATTYLGGEFAVQ--------------------------------------NYNVMGVAKASLEANVKYLALDLGPD 181 (256)
T ss_dssp EEEEEEECGGGTSCCT--------------------------------------TTHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred CEEEEEeccccccCcc--------------------------------------cchhhHHHHHHHHHHHHHHHHHhCcc
Confidence 6899999986643211 016899999988888776554 6
Q ss_pred CCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCC
Q psy7538 243 GMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322 (543)
Q Consensus 243 ~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~ 322 (543)
|+.+..+.|+.|-.+..+ ...........+....+ ..-+...+|+|++++.++..... -..
T Consensus 182 gIrVN~V~PG~i~T~~~~-------~~~~~~~~~~~~~~~~P---------l~R~g~peevA~~v~fL~Sd~a~---~iT 242 (256)
T 4fs3_A 182 NIRVNAISAGPIRTLSAK-------GVGGFNTILKEIKERAP---------LKRNVDQVEVGKTAAYLLSDLSS---GVT 242 (256)
T ss_dssp TEEEEEEEECCCCSGGGT-------TCTTHHHHHHHHHHHST---------TSSCCCHHHHHHHHHHHHSGGGT---TCC
T ss_pred CeEEEEEecCCCCChhhh-------hccCCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCchhc---Ccc
Confidence 899999999987554332 11222233333322211 11234578999998887755432 135
Q ss_pred CcEEEeecC
Q psy7538 323 KSVCNLTSN 331 (543)
Q Consensus 323 ~~vyni~s~ 331 (543)
|++..+.+|
T Consensus 243 G~~i~VDGG 251 (256)
T 4fs3_A 243 GENIHVDSG 251 (256)
T ss_dssp SCEEEESTT
T ss_pred CCEEEECcC
Confidence 788888765
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=2e-12 Score=129.19 Aligned_cols=235 Identities=11% Similarity=0.027 Sum_probs=139.4
Q ss_pred cCCCEEEEEcCc--chhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 28 YENKSIFLSGGS--GFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 28 ~~~~~VlITGat--GFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
++||+++||||+ |+||++++++|++.|. +|+++.|.... .+...-.+..-.+.+.+............+.+
T Consensus 6 l~~k~~lVTGas~~~GIG~aia~~la~~G~---~V~~~~r~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (297)
T 1d7o_A 6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGA---EILVGTWVPAL----NIFETSLRRGKFDQSRVLPDGSLMEIKKVYPL 78 (297)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHHTTC---EEEEEEEHHHH----HHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEE
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHHHCCC---eEEEeeccccc----hhhhhhhhhhHhhhhhhhcccccccccccccc
Confidence 578999999999 9999999999999986 78888764200 00000000000000000000000011233334
Q ss_pred cC--------C----C--------CCCCCCHHHHHHHh-------cCccEEEEcCccCC-----C----cccHHHHHHHH
Q psy7538 106 DI--------T----Q--------LKLGISEIDKKELI-------DNVDIVYHVAATIR-----F----DEPIKTAVILN 149 (543)
Q Consensus 106 Dl--------~----~--------~~lgls~~~~~~l~-------~~vd~ViH~AA~v~-----~----~~~~~~~~~~N 149 (543)
|+ + + ++ +++.++ .++|++||+||... + .+.++..+++|
T Consensus 79 ~~~~~~~~dv~~Dv~~~~~~~~~~~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN 152 (297)
T 1d7o_A 79 DAVFDNPEDVPEDVKANKRYAGSSNW------TVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISAS 152 (297)
T ss_dssp CTTCCSGGGSCHHHHTSHHHHHCCCC------SHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHH
T ss_pred ceeccchhhhhhhhhccccccccCHH------HHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHh
Confidence 32 2 1 22 233333 36899999998532 1 23466789999
Q ss_pred HHHHHHHHHHHHhc-cCCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHH
Q psy7538 150 TRGTRDMLELSKQM-KNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYT 228 (543)
Q Consensus 150 v~gt~~ll~~a~~~-~~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~t 228 (543)
+.|+.++++++... ..-.++|++||..+..... . +...|+.|
T Consensus 153 ~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~----------~---------------------------~~~~Y~as 195 (297)
T 1d7o_A 153 SYSFVSLLSHFLPIMNPGGASISLTYIASERIIP----------G---------------------------YGGGMSSA 195 (297)
T ss_dssp THHHHHHHHHHGGGEEEEEEEEEEECGGGTSCCT----------T---------------------------CTTTHHHH
T ss_pred hhHHHHHHHHHHHHhccCceEEEEeccccccCCC----------C---------------------------cchHHHHH
Confidence 99999999999763 1125899999986542210 0 00379999
Q ss_pred HHHHHHHHHHHhh-----cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHH
Q psy7538 229 KCLAEGLVAECME-----LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVA 303 (543)
Q Consensus 229 K~~aE~~v~~~~~-----~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddv 303 (543)
|+..+.+.+..+. +|+.+..++|+.|.++..... .....+........ ....+..++|+
T Consensus 196 Kaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~-------~~~~~~~~~~~~~~---------p~~r~~~pedv 259 (297)
T 1d7o_A 196 KAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAI-------GFIDTMIEYSYNNA---------PIQKTLTADEV 259 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCC-------SHHHHHHHHHHHHS---------SSCCCBCHHHH
T ss_pred HHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhc-------cccHHHHHHhhccC---------CCCCCCCHHHH
Confidence 9999988765432 389999999999987653321 11111222221111 11235678999
Q ss_pred HHHHHHHhhhhcccCCCCCCcEEEeecC
Q psy7538 304 INGVFLFTWDFLNSKESERKSVCNLTSN 331 (543)
Q Consensus 304 a~a~i~a~~~~~~~~~~~~~~vyni~s~ 331 (543)
|++++.++..... ...++++++.++
T Consensus 260 A~~v~~l~s~~~~---~itG~~i~vdgG 284 (297)
T 1d7o_A 260 GNAAAFLVSPLAS---AITGATIYVDNG 284 (297)
T ss_dssp HHHHHHHTSGGGT---TCCSCEEEESTT
T ss_pred HHHHHHHhCcccc---CCCCCEEEECCC
Confidence 9999888764332 135789999876
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=1.2e-12 Score=128.35 Aligned_cols=220 Identities=12% Similarity=0.142 Sum_probs=143.0
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||++-||++++++|.+.|. +|++..|.+... ..+...+.+|+
T Consensus 9 L~GK~alVTGas~GIG~aia~~la~~Ga---~V~~~~r~~~~~--------------------------~~~~~~~~~Dv 59 (261)
T 4h15_A 9 LRGKRALITAGTKGAGAATVSLFLELGA---QVLTTARARPEG--------------------------LPEELFVEADL 59 (261)
T ss_dssp CTTCEEEESCCSSHHHHHHHHHHHHTTC---EEEEEESSCCTT--------------------------SCTTTEEECCT
T ss_pred CCCCEEEEeccCcHHHHHHHHHHHHcCC---EEEEEECCchhC--------------------------CCcEEEEEcCC
Confidence 5899999999999999999999999997 889999975321 12334688999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCC-----C----cccHHHHHHHHHHHHHHHHHHHHhc---cCCce
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIR-----F----DEPIKTAVILNTRGTRDMLELSKQM---KNLKC 168 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~-----~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~ 168 (543)
++++ +++.+++ ++|++||+||... + .+.++..+++|+.|+.++.+.+... ++-.+
T Consensus 60 ~~~~------~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~ 133 (261)
T 4h15_A 60 TTKE------GCAIVAEATRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGV 133 (261)
T ss_dssp TSHH------HHHHHHHHHHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCce
Confidence 9875 5555443 5899999998532 1 2456778999999998888776531 24468
Q ss_pred EEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCC
Q psy7538 169 FTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGM 244 (543)
Q Consensus 169 ~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~l 244 (543)
+|++||..+..... . ....|+.||+..+.+.+..+. +|+
T Consensus 134 Iv~isS~~~~~~~~----------~---------------------------~~~~Y~asKaal~~lt~~lA~Ela~~gI 176 (261)
T 4h15_A 134 VVHVTSIQRVLPLP----------E---------------------------STTAYAAAKAALSTYSKAMSKEVSPKGV 176 (261)
T ss_dssp EEEECCGGGTSCCT----------T---------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred EEEEEehhhccCCC----------C---------------------------ccHHHHHHHHHHHHHHHHHHHHhhhhCe
Confidence 99999986542210 0 015799999988888776554 689
Q ss_pred cEEEEecCeeeecCCCCCCCCC-----CCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCC
Q psy7538 245 PCMILRPSIVVPIYKEPLPGWT-----DNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKE 319 (543)
Q Consensus 245 p~~IlRps~V~G~~~~p~~gw~-----d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~ 319 (543)
.+..+.|+.|-.+......... ................. ...-+...+|+|++++.++.....
T Consensus 177 rVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------PlgR~g~peevA~~v~fLaS~~a~--- 244 (261)
T 4h15_A 177 RVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGI---------PLGRPAKPEEVANLIAFLASDRAA--- 244 (261)
T ss_dssp EEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCC---------TTSSCBCHHHHHHHHHHHHSGGGT---
T ss_pred EEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCC---------CCCCCcCHHHHHHHHHHHhCchhc---
Confidence 9999999877433110000000 00000000111111111 111245678999998887754432
Q ss_pred CCCCcEEEeecC
Q psy7538 320 SERKSVCNLTSN 331 (543)
Q Consensus 320 ~~~~~vyni~s~ 331 (543)
-..|+++++.+|
T Consensus 245 ~itG~~i~VDGG 256 (261)
T 4h15_A 245 SITGAEYTIDGG 256 (261)
T ss_dssp TCCSCEEEESTT
T ss_pred CccCcEEEECCc
Confidence 135888888776
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.44 E-value=9.1e-13 Score=144.74 Aligned_cols=214 Identities=13% Similarity=0.116 Sum_probs=133.2
Q ss_pred hhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCC---CHHHHHHHHhcCchhHHHHhhcCcCCCCceEE
Q psy7538 26 KTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGK---TPNQRVEELFESPVFDALKTLRGKSILQKIQV 102 (543)
Q Consensus 26 ~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~---~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~ 102 (543)
.-++||+++||||+|.||++++++|++.|. +|+++.|..... ...+++++. .+.++... ..
T Consensus 15 ~~l~gk~~lVTGas~GIG~aiA~~La~~Ga---~Vv~~~r~~~~~~~~~~~~~~~~~-----~~~i~~~~-----~~--- 78 (613)
T 3oml_A 15 LRYDGRVAVVTGAGAGLGREYALLFAERGA---KVVVNDLGGTHSGDGASQRAADIV-----VDEIRKAG-----GE--- 78 (613)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEC--------------CHHHH-----HHHHHHTT-----CC---
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCcccccccCCHHHHHHH-----HHHHHHhC-----Ce---
Confidence 347899999999999999999999999986 888888732100 001111111 11121111 12
Q ss_pred EEccCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cC
Q psy7538 103 ISGDITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KN 165 (543)
Q Consensus 103 i~gDl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~ 165 (543)
+.+|+++.+ +.+.+++ .+|++||+||.... .+.++..+++|+.|+.++.+++... .+
T Consensus 79 ~~~D~~d~~------~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~ 152 (613)
T 3oml_A 79 AVADYNSVI------DGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQN 152 (613)
T ss_dssp EEECCCCGG------GHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred EEEEeCCHH------HHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 236888765 5666554 58999999997642 2456778999999999999988331 24
Q ss_pred CceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----
Q psy7538 166 LKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME---- 241 (543)
Q Consensus 166 l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~---- 241 (543)
-.++|++||..+..... ....|+.||+..+.+.+..+.
T Consensus 153 ~g~IV~isS~a~~~~~~--------------------------------------~~~~Y~asKaal~~lt~~la~e~~~ 194 (613)
T 3oml_A 153 YGRIIMTSSNSGIYGNF--------------------------------------GQVNYTAAKMGLIGLANTVAIEGAR 194 (613)
T ss_dssp CEEEEEECCHHHHHCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred CCEEEEECCHHHcCCCC--------------------------------------CChHHHHHHHHHHHHHHHHHHHhCc
Confidence 57999999985532110 015899999999988877654
Q ss_pred cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCC
Q psy7538 242 LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESE 321 (543)
Q Consensus 242 ~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~ 321 (543)
+|+.+..+.|+.+..... .... ......+..+|+|++++.++..... .
T Consensus 195 ~gI~vn~v~Pg~~t~~~~--------~~~~--------------------~~~~~~~~pedvA~~v~~L~s~~~~----~ 242 (613)
T 3oml_A 195 NNVLCNVIVPTAASRMTE--------GILP--------------------DILFNELKPKLIAPVVAYLCHESCE----D 242 (613)
T ss_dssp GTEEEEEEEEC------C--------CCCC--------------------HHHHTTCCGGGTHHHHHHTTSTTCC----C
T ss_pred cCeEEEEEECCCCChhhh--------hccc--------------------hhhhhcCCHHHHHHHHHHhcCCCcC----C
Confidence 589999999985421111 1000 1112334678999998877765422 3
Q ss_pred CCcEEEeecC
Q psy7538 322 RKSVCNLTSN 331 (543)
Q Consensus 322 ~~~vyni~s~ 331 (543)
.|+++++.+|
T Consensus 243 tG~~i~vdGG 252 (613)
T 3oml_A 243 NGSYIESAAG 252 (613)
T ss_dssp CSCEEEEETT
T ss_pred CceEEEECCC
Confidence 5778887765
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=99.29 E-value=5e-11 Score=120.39 Aligned_cols=248 Identities=12% Similarity=0.032 Sum_probs=121.0
Q ss_pred cCCCEEEEEcC--cchhHHHHHHHHHhhCCCcCEEEEEecCC------CCCCHHHHHHHH--hcC----chhHHHHhhcC
Q psy7538 28 YENKSIFLSGG--SGFLGKVLIEKILRLEPNVKKIYLLMRTK------KGKTPNQRVEEL--FES----PVFDALKTLRG 93 (543)
Q Consensus 28 ~~~~~VlITGa--tGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~------~~~~~~~rl~~~--~~~----~~f~~l~~~~~ 93 (543)
++||+++|||| +|+||++++++|++.|. +|+++.|+. ... ..+++++. +.. .+-+.++...
T Consensus 7 l~~k~~lVTGa~~s~GIG~aia~~la~~G~---~Vv~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~- 81 (319)
T 2ptg_A 7 LRGKTAFVAGVADSNGYGWAICKLLRAAGA---RVLVGTWPPVYSIFKKGL-ESSRFEQDSFYAQEPSSKVAAEAAEKP- 81 (319)
T ss_dssp CTTCEEEEECCCCTTSHHHHHHHHHHHTTC---EEEEEECHHHHHHHHC-------------------------------
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHCCC---EEEEEeccccccchhhhh-hhhhhhhhhhhhcchhhhHHHHhhhcc-
Confidence 57899999999 89999999999999986 788887642 000 00111110 000 0111111100
Q ss_pred cCCCCceEEEEccC--CCCC-CCC-----------CHHHHHHHh-------cCccEEEEcCccCC-----C----cccHH
Q psy7538 94 KSILQKIQVISGDI--TQLK-LGI-----------SEIDKKELI-------DNVDIVYHVAATIR-----F----DEPIK 143 (543)
Q Consensus 94 ~~~~~~v~~i~gDl--~~~~-lgl-----------s~~~~~~l~-------~~vd~ViH~AA~v~-----~----~~~~~ 143 (543)
. .......+.+|+ ++++ +-. ++++++.++ .++|++||+||... + .+.++
T Consensus 82 ~-~~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~ 160 (319)
T 2ptg_A 82 V-DLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYL 160 (319)
T ss_dssp ----CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHH
T ss_pred c-cccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHH
Confidence 0 000123444442 2211 000 001233333 36899999998531 1 23456
Q ss_pred HHHHHHHHHHHHHHHHHHhc-cCCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCC
Q psy7538 144 TAVILNTRGTRDMLELSKQM-KNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFP 222 (543)
Q Consensus 144 ~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p 222 (543)
..+++|+.|+.++++++... ..-.++|++||..+..... . +.
T Consensus 161 ~~~~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~----------~---------------------------~~ 203 (319)
T 2ptg_A 161 AAVSSSSYSFVSLLQHFLPLMKEGGSALALSYIASEKVIP----------G---------------------------YG 203 (319)
T ss_dssp HHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEECC----------------------------------------------
T ss_pred HHHhHhhHHHHHHHHHHHHHHhcCceEEEEeccccccccC----------c---------------------------cc
Confidence 78999999999999998753 1116899999986532110 0 01
Q ss_pred chHHHHHHHHHHHHHHHhh-----cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCccccc
Q psy7538 223 NSYAYTKCLAEGLVAECME-----LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADF 297 (543)
Q Consensus 223 n~Y~~tK~~aE~~v~~~~~-----~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~ 297 (543)
..|+.||+..+.+.+..+. +|+.+..++|+.|-.+.....+. . ....+...... . ........-+
T Consensus 204 ~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~---~--~~~~~~~~~~~----~-~~~~~p~~r~ 273 (319)
T 2ptg_A 204 GGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAASAIGK---A--GDKTFIDLAID----Y-SEANAPLQKE 273 (319)
T ss_dssp ---------THHHHHHHHHHHHHHHCCEEEEEEECCCC-----------------------------------------C
T ss_pred hhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChhhhhccc---c--cchhhHHHHHH----H-HhccCCCCCC
Confidence 3799999888877765432 38999999999886543211000 0 00000000000 0 0000011235
Q ss_pred chHHHHHHHHHHHhhhhcccCCCCCCcEEEeecC
Q psy7538 298 LPADVAINGVFLFTWDFLNSKESERKSVCNLTSN 331 (543)
Q Consensus 298 V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~ 331 (543)
...+|+|++++.++..... -..|+++.+.++
T Consensus 274 ~~peevA~~v~~L~s~~~~---~itG~~i~vdGG 304 (319)
T 2ptg_A 274 LESDDVGRAALFLLSPLAR---AVTGATLYVDNG 304 (319)
T ss_dssp CCHHHHHHHHHHHTSGGGT---TCCSCEEEESTT
T ss_pred CCHHHHHHHHHHHhCcccC---CccCCEEEECCC
Confidence 6789999999988865332 135788888776
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=1.9e-10 Score=136.39 Aligned_cols=168 Identities=13% Similarity=0.118 Sum_probs=117.2
Q ss_pred cCCCEEEEEcCcch-hHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 28 YENKSIFLSGGSGF-LGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 28 ~~~~~VlITGatGF-iG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
++||+++||||+|. ||.+++++|++.|. +|+++.|... +++.+. .+.+..+. .....++.++.+|
T Consensus 650 L~gKvaLVTGASgGgIG~aIAr~LA~~GA---~VVl~~~R~~-----~~l~~~-----a~eL~~el-~~~G~~v~~v~~D 715 (1878)
T 2uv9_A 650 FQGKHALMTGAGAGSIGAEVLQGLLSGGA---KVIVTTSRFS-----RQVTEY-----YQGIYARC-GARGSQLVVVPFN 715 (1878)
T ss_dssp CTTCEEEEESCCTTSHHHHHHHHHHHTTC---EEEEEESSCC-----HHHHHH-----HHHHHHHH-CCTTCEEEEEECC
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHCCC---EEEEEecCCh-----HHHHHH-----HHHHHHHh-hccCCeEEEEEcC
Confidence 67899999999999 99999999999986 7877754322 111111 11111111 2223578899999
Q ss_pred CCCCCCCCCHHHHHHHhc-----------CccEEEEcCccCCCc----------ccHHHHHHHHHHHHHHHHHHHHhccC
Q psy7538 107 ITQLKLGISEIDKKELID-----------NVDIVYHVAATIRFD----------EPIKTAVILNTRGTRDMLELSKQMKN 165 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~-----------~vd~ViH~AA~v~~~----------~~~~~~~~~Nv~gt~~ll~~a~~~~~ 165 (543)
+++++ +++.+++ .+|+|||+||..... +.+...+++|+.|+.+++++++..+.
T Consensus 716 Vsd~e------sV~alv~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~ 789 (1878)
T 2uv9_A 716 QGSKQ------DVEALVNYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERG 789 (1878)
T ss_dssp TTCHH------HHHHHHHHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CCCHH------HHHHHHHHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 99875 6666542 489999999965321 34567899999999999887543322
Q ss_pred -----CceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHh
Q psy7538 166 -----LKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECM 240 (543)
Q Consensus 166 -----l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~ 240 (543)
..+||++||..+.... ...|+.||+..+.+.....
T Consensus 790 M~~~~~G~IVnISS~ag~~gg----------------------------------------~~aYaASKAAL~aLt~~la 829 (1878)
T 2uv9_A 790 YETRPAQVILPLSPNHGTFGN----------------------------------------DGLYSESKLALETLFNRWY 829 (1878)
T ss_dssp CCSCCEEECCEECSCSSSSSC----------------------------------------CSSHHHHHHHHTTHHHHHH
T ss_pred HHhCCCCEEEEEcchhhccCC----------------------------------------chHHHHHHHHHHHHHHHHH
Confidence 2589999998553220 1689999999998876533
Q ss_pred h----cCCcEEEEecCeee
Q psy7538 241 E----LGMPCMILRPSIVV 255 (543)
Q Consensus 241 ~----~~lp~~IlRps~V~ 255 (543)
. .++++..+.||.|-
T Consensus 830 AeEla~~IrVNaVaPG~V~ 848 (1878)
T 2uv9_A 830 SESWGNYLTICGAVIGWTR 848 (1878)
T ss_dssp HSTTTTTEEEEEEEECCBC
T ss_pred HHHcCCCeEEEEEEeccee
Confidence 2 23888889988775
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=1.1e-10 Score=117.67 Aligned_cols=246 Identities=11% Similarity=0.017 Sum_probs=136.6
Q ss_pred cCCCEEEEEcC--cchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 28 YENKSIFLSGG--SGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 28 ~~~~~VlITGa--tGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
++||+++|||| +|+||++++++|++.|. +|+++.|+.. ..|..+-.+..-.+.+.+.........+..+.+
T Consensus 7 l~gk~~lVTGa~~s~GIG~aia~~la~~G~---~Vv~~~r~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (315)
T 2o2s_A 7 LRGQTAFVAGVADSHGYGWAIAKHLASAGA---RVALGTWPPV----LGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPL 79 (315)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHTTTC---EEEEEECHHH----HHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEEC
T ss_pred CCCCEEEEeCCCCCCChHHHHHHHHHHCCC---EEEEEecccc----cchhhhhhhhhhhhhhhhhhccccccccccccc
Confidence 57899999999 89999999999999986 7888877421 000000000000001110000000001233333
Q ss_pred cC--CCCC-CCC-----------CHHHHHHHh-------cCccEEEEcCccCC-----C----cccHHHHHHHHHHHHHH
Q psy7538 106 DI--TQLK-LGI-----------SEIDKKELI-------DNVDIVYHVAATIR-----F----DEPIKTAVILNTRGTRD 155 (543)
Q Consensus 106 Dl--~~~~-lgl-----------s~~~~~~l~-------~~vd~ViH~AA~v~-----~----~~~~~~~~~~Nv~gt~~ 155 (543)
|+ ++++ +.. ++++++.++ .++|++||+||... + .+.++..+++|+.|+.+
T Consensus 80 d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~ 159 (315)
T 2o2s_A 80 DAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVS 159 (315)
T ss_dssp CTTCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHH
T ss_pred cccccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHH
Confidence 33 1111 000 011333333 36999999998542 1 24456789999999999
Q ss_pred HHHHHHhc-cCCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHH
Q psy7538 156 MLELSKQM-KNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEG 234 (543)
Q Consensus 156 ll~~a~~~-~~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~ 234 (543)
+++++... ..-.++|++||..+..... .+...|+.||+..+.
T Consensus 160 l~~~~~~~m~~~g~Iv~isS~~~~~~~~-------------------------------------~~~~~Y~asKaal~~ 202 (315)
T 2o2s_A 160 LLQHFGPIMNEGGSAVTLSYLAAERVVP-------------------------------------GYGGGMSSAKAALES 202 (315)
T ss_dssp HHHHHSTTEEEEEEEEEEEEGGGTSCCT-------------------------------------TCCTTHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCEEEEEecccccccCC-------------------------------------CccHHHHHHHHHHHH
Confidence 99998653 1115899999986542210 011379999998888
Q ss_pred HHHHHhh-----cCCcEEEEecCeeeecCCCCCCCCCCCCCch-HHHHHHHhcCceeEEeecCCcccccchHHHHHHHHH
Q psy7538 235 LVAECME-----LGMPCMILRPSIVVPIYKEPLPGWTDNINGP-TGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVF 308 (543)
Q Consensus 235 ~v~~~~~-----~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~-~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i 308 (543)
+.+..+. +|+.+..++|+.|-.+.....+.. ..... ..+........ ...-+...+|+|++++
T Consensus 203 l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~--~~~~~~~~~~~~~~~~~---------p~~r~~~pedvA~~v~ 271 (315)
T 2o2s_A 203 DTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKS--GEKSFIDYAIDYSYNNA---------PLRRDLHSDDVGGAAL 271 (315)
T ss_dssp HHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCS--SSSCHHHHHHHHHHHHS---------SSCCCCCHHHHHHHHH
T ss_pred HHHHHHHHhCcccCeEEEEEecccccchhhhhcccc--ccchhHHHHHHHHhccC---------CCCCCCCHHHHHHHHH
Confidence 8765432 489999999998855421100000 00000 00111111000 1112457899999999
Q ss_pred HHhhhhcccCCCCCCcEEEeecC
Q psy7538 309 LFTWDFLNSKESERKSVCNLTSN 331 (543)
Q Consensus 309 ~a~~~~~~~~~~~~~~vyni~s~ 331 (543)
.++..... -..|+++.+.++
T Consensus 272 ~L~s~~~~---~itG~~i~vdGG 291 (315)
T 2o2s_A 272 FLLSPLAR---AVSGVTLYVDNG 291 (315)
T ss_dssp HHTSGGGT---TCCSCEEEESTT
T ss_pred HHhCchhc---cCcCCEEEECCC
Confidence 88764332 135788888776
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=99.23 E-value=4.1e-11 Score=135.07 Aligned_cols=166 Identities=16% Similarity=0.243 Sum_probs=125.4
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHH-hhCCCcCEEEEEecCCCCC-CHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEE
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKIL-RLEPNVKKIYLLMRTKKGK-TPNQRVEELFESPVFDALKTLRGKSILQKIQVIS 104 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll-~~g~~v~~V~~l~R~~~~~-~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~ 104 (543)
|-.+++++||||+|-||+.+++.|. +.|. ++|.++.|+.... ..++-++++ .....++.++.
T Consensus 527 ~~~~~~~lItGg~~GlG~aiA~~la~~~Ga--~~vvl~~R~~~~~~~~~~~~~~l--------------~~~G~~v~~~~ 590 (795)
T 3slk_A 527 WDAAGTVLVTGGTGALGAEVARHLVIERGV--RNLVLVSRRGPAASGAAELVAQL--------------TAYGAEVSLQA 590 (795)
T ss_dssp CCTTSEEEEETTTSHHHHHHHHHHHHTSSC--CEEEEEESSGGGSTTHHHHHHHH--------------HHTTCEEEEEE
T ss_pred cccccceeeccCCCCcHHHHHHHHHHHcCC--cEEEEeccCccchHHHHHHHHHH--------------HhcCCcEEEEE
Confidence 4468999999999999999999999 6765 4689999985432 222322232 11235789999
Q ss_pred ccCCCCCCCCCHHHHHHHhcC------ccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhccCCceEEE
Q psy7538 105 GDITQLKLGISEIDKKELIDN------VDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTY 171 (543)
Q Consensus 105 gDl~~~~lgls~~~~~~l~~~------vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~ 171 (543)
+|+++++ +++.+++. +|+|||+|+.... .+.++..+++|+.|+.++.+++. +.+ +||+
T Consensus 591 ~Dvsd~~------~v~~~~~~~~~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~--~~l-~iV~ 661 (795)
T 3slk_A 591 CDVADRE------TLAKVLASIPDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELID--PDV-ALVL 661 (795)
T ss_dssp CCTTCHH------HHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSC--TTS-EEEE
T ss_pred eecCCHH------HHHHHHHHHHHhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHh--hCC-EEEE
Confidence 9999875 77777653 6999999997642 24567789999999999999883 356 9999
Q ss_pred EecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEec
Q psy7538 172 ISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRP 251 (543)
Q Consensus 172 vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRp 251 (543)
+||..+..... ....|+.+|...+.+..+....|+++..+-|
T Consensus 662 ~SS~ag~~g~~--------------------------------------g~~~YaAaka~~~alA~~~~~~Gi~v~sI~p 703 (795)
T 3slk_A 662 FSSVSGVLGSG--------------------------------------GQGNYAAANSFLDALAQQRQSRGLPTRSLAW 703 (795)
T ss_dssp EEETHHHHTCS--------------------------------------SCHHHHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred EccHHhcCCCC--------------------------------------CCHHHHHHHHHHHHHHHHHHHcCCeEEEEEC
Confidence 99986532211 0168999999999888777667999999999
Q ss_pred Ceee
Q psy7538 252 SIVV 255 (543)
Q Consensus 252 s~V~ 255 (543)
+.+-
T Consensus 704 G~v~ 707 (795)
T 3slk_A 704 GPWA 707 (795)
T ss_dssp CCCS
T ss_pred CeEC
Confidence 8664
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.20 E-value=4e-11 Score=137.94 Aligned_cols=168 Identities=14% Similarity=0.120 Sum_probs=116.7
Q ss_pred cCCCEEEEEcCcch-hHHHHHHHHHhhCCCcCEEEEE-ecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 28 YENKSIFLSGGSGF-LGKVLIEKILRLEPNVKKIYLL-MRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 28 ~~~~~VlITGatGF-iG~~Lv~~Ll~~g~~v~~V~~l-~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
++||+++||||+|. ||+++++.|++.|. +|+++ .|...... +-.++ +..+. .....++.++.+
T Consensus 474 L~GKvALVTGASgGGIGrAIAr~LA~~GA---~VVL~~~R~~e~le--e~a~e---------L~ael-~a~Ga~V~vV~~ 538 (1688)
T 2pff_A 474 FKDKYVLITGAGKGSIGAEVLQGLLQGGA---KVVVTTSRFSKQVT--DYYQS---------IYAKY-GAKGSTLIVVPF 538 (1688)
T ss_dssp CCSCCEEECSCSSSSTHHHHHHHHHHHTC---EEEEEESSCSTTTT--THHHH---------TTTTT-CCTTCEEEEEEC
T ss_pred cCCCEEEEECCChHHHHHHHHHHHHHCcC---EEEEEeCCCHHHHH--HHHHH---------HHHHh-hcCCCeEEEEEe
Confidence 67899999999999 99999999999986 77777 45432211 11111 11111 112357889999
Q ss_pred cCCCCCCCCCHHHHHHHhc-------------CccEEEEcCccCCC----------cccHHHHHHHHHHHHHHHHHHHHh
Q psy7538 106 DITQLKLGISEIDKKELID-------------NVDIVYHVAATIRF----------DEPIKTAVILNTRGTRDMLELSKQ 162 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~-------------~vd~ViH~AA~v~~----------~~~~~~~~~~Nv~gt~~ll~~a~~ 162 (543)
|+++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+.+++++++.
T Consensus 539 DVTD~e------sVeaLVe~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~ 612 (1688)
T 2pff_A 539 NQGSKQ------DVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKS 612 (1688)
T ss_dssp CSSSTT------HHHHHHHHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred CCCCHH------HHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999987 5665542 48999999996532 133566899999999999998844
Q ss_pred ccCC-----ceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHH
Q psy7538 163 MKNL-----KCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVA 237 (543)
Q Consensus 163 ~~~l-----~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~ 237 (543)
.+.+ .+||++||..+.... ...|+.||+..+.++.
T Consensus 613 lp~M~krggGrIVnISSiAG~~Gg----------------------------------------~saYaASKAAL~aLtt 652 (1688)
T 2pff_A 613 ARGIETRPAQVILPMSPNHGTFGG----------------------------------------DGMYSESKLSLETLFN 652 (1688)
T ss_dssp HHTCTTSCEEECCCCCSCTTTSSC----------------------------------------BTTHHHHHHHHTHHHH
T ss_pred ChHHHhCCCCEEEEEEChHhccCC----------------------------------------chHHHHHHHHHHHHHH
Confidence 3222 589999998553220 1689999999999844
Q ss_pred HH-hh---cCCcEEEEecCeeee
Q psy7538 238 EC-ME---LGMPCMILRPSIVVP 256 (543)
Q Consensus 238 ~~-~~---~~lp~~IlRps~V~G 256 (543)
+. +. .++.+..+.||.|-+
T Consensus 653 rsLAeEla~~IRVNaVaPG~V~T 675 (1688)
T 2pff_A 653 RWHSESWANQLTVCGAIIGWTRG 675 (1688)
T ss_dssp HTTTSSCTTTEECCCCCCCCCCC
T ss_pred HHHHHHcCCCeEEEEEEECcCcC
Confidence 43 22 136777788887764
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=3.8e-10 Score=134.07 Aligned_cols=168 Identities=14% Similarity=0.135 Sum_probs=119.3
Q ss_pred cCCCEEEEEcCcch-hHHHHHHHHHhhCCCcCEEEEEe-cCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 28 YENKSIFLSGGSGF-LGKVLIEKILRLEPNVKKIYLLM-RTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 28 ~~~~~VlITGatGF-iG~~Lv~~Ll~~g~~v~~V~~l~-R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
++||+++||||+|. ||+++++.|++.|. +|+++. |... ++++. .+.+..+. .....++.++.+
T Consensus 673 l~gKvaLVTGASsGgIG~aIA~~La~~GA---~Vvl~~~R~~~------~l~~~-----~~eL~~~~-~~~g~~v~~v~~ 737 (1887)
T 2uv8_A 673 FKDKYVLITGAGKGSIGAEVLQGLLQGGA---KVVVTTSRFSK------QVTDY-----YQSIYAKY-GAKGSTLIVVPF 737 (1887)
T ss_dssp CTTCEEEEESCCSSSHHHHHHHHHHHTTC---EEEEEESSCCH------HHHHH-----HHHHHHHH-CCTTCEEEEEEC
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHCCC---EEEEEecCCHH------HHHHH-----HHHHHHHh-hcCCCeEEEEEe
Confidence 67899999999999 99999999999986 787774 4431 22111 11122221 222357889999
Q ss_pred cCCCCCCCCCHHHHHHHhc-------------CccEEEEcCccCCCc----------ccHHHHHHHHHHHHHHHHHHHHh
Q psy7538 106 DITQLKLGISEIDKKELID-------------NVDIVYHVAATIRFD----------EPIKTAVILNTRGTRDMLELSKQ 162 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~-------------~vd~ViH~AA~v~~~----------~~~~~~~~~Nv~gt~~ll~~a~~ 162 (543)
|+++++ +++.+++ .+|++||+||..... +.++..+++|+.|+..++++++.
T Consensus 738 DVsd~~------sV~alv~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~ 811 (1887)
T 2uv8_A 738 NQGSKQ------DVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKS 811 (1887)
T ss_dssp CTTCHH------HHHHHHHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred cCCCHH------HHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999875 5665542 489999999975321 33566899999999999998865
Q ss_pred ccCC-----ceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHH-H
Q psy7538 163 MKNL-----KCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGL-V 236 (543)
Q Consensus 163 ~~~l-----~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~-v 236 (543)
.+.+ .++|++||..+.... ...|+.||+..+.+ .
T Consensus 812 lp~m~~~~~G~IVnISS~ag~~gg----------------------------------------~~aYaASKAAL~~Ltt 851 (1887)
T 2uv8_A 812 ARGIETRPAQVILPMSPNHGTFGG----------------------------------------DGMYSESKLSLETLFN 851 (1887)
T ss_dssp TTTCCSCCEEEEEEECSCTTCSSC----------------------------------------BTTHHHHHHHGGGHHH
T ss_pred hhhhhhCCCCEEEEEcChHhccCC----------------------------------------CchHHHHHHHHHHHHH
Confidence 4332 589999998553220 06899999999998 4
Q ss_pred HHHhh---cCCcEEEEecCeeee
Q psy7538 237 AECME---LGMPCMILRPSIVVP 256 (543)
Q Consensus 237 ~~~~~---~~lp~~IlRps~V~G 256 (543)
+.... ..+.+..+.||.|-+
T Consensus 852 r~lA~ela~~IrVNaV~PG~V~t 874 (1887)
T 2uv8_A 852 RWHSESWANQLTVCGAIIGWTRG 874 (1887)
T ss_dssp HHHHSSCTTTEEEEEEEECCEEC
T ss_pred HHHHHHhCCCeEEEEEEeccccc
Confidence 44333 138889999998874
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=99.16 E-value=2.9e-10 Score=115.28 Aligned_cols=184 Identities=8% Similarity=-0.007 Sum_probs=115.9
Q ss_pred CCCEEEEEcCcc--hhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 29 ENKSIFLSGGSG--FLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 29 ~~~~VlITGatG--FiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
++|+++||||++ .||++++++|++.|. +|++..|+.... ...|-.+-.+. -....... ......+.++.+|
T Consensus 1 ~~k~~lITGas~~~GIG~aiA~~la~~G~---~Vv~~~~~~~~~-l~~r~~~~~~~--~~~~~~~~-~~~~~~~~~~~~D 73 (329)
T 3lt0_A 1 NEDICFIAGIGDTNGYGWGIAKELSKRNV---KIIFGIWPPVYN-IFMKNYKNGKF--DNDMIIDK-DKKMNILDMLPFD 73 (329)
T ss_dssp CCCEEEEECCSSSSSHHHHHHHHHHHTTC---EEEEEECHHHHH-HHHHHHHTTTT--TGGGBCSS-SCBCCEEEEEECC
T ss_pred CCcEEEEECCCCCCchHHHHHHHHHHCCC---EEEEEecCcccc-ccccchHHHHH--HHHHHHhh-ccccccccccccc
Confidence 478999999875 899999999999987 777666543000 00000000000 00000000 1122457889999
Q ss_pred CCCCCCC-CCHH-------------HHHHHh-------cCccEEEEcCccCC-----C----cccHHHHHHHHHHHHHHH
Q psy7538 107 ITQLKLG-ISEI-------------DKKELI-------DNVDIVYHVAATIR-----F----DEPIKTAVILNTRGTRDM 156 (543)
Q Consensus 107 l~~~~lg-ls~~-------------~~~~l~-------~~vd~ViH~AA~v~-----~----~~~~~~~~~~Nv~gt~~l 156 (543)
+++.... ++.+ +++.++ ..+|++||+||... + .+.++..+++|+.|+..+
T Consensus 74 v~~~~~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l 153 (329)
T 3lt0_A 74 ASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISL 153 (329)
T ss_dssp TTCSSGGGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred ccccchhhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHH
Confidence 9887211 1222 333333 36899999998531 1 244677899999999999
Q ss_pred HHHHHhc-cCCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCc-hHHHHHHHHHH
Q psy7538 157 LELSKQM-KNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPN-SYAYTKCLAEG 234 (543)
Q Consensus 157 l~~a~~~-~~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn-~Y~~tK~~aE~ 234 (543)
.+++... ..-.++|++||..+..... ... .|+.||+..+.
T Consensus 154 ~~~~~p~m~~~g~Iv~isS~~~~~~~~--------------------------------------~~~~~Y~asKaal~~ 195 (329)
T 3lt0_A 154 CKYFVNIMKPQSSIISLTYHASQKVVP--------------------------------------GYGGGMSSAKAALES 195 (329)
T ss_dssp HHHHGGGEEEEEEEEEEECGGGTSCCT--------------------------------------TCTTTHHHHHHHHHH
T ss_pred HHHHHHHHhhCCeEEEEeCccccCCCC--------------------------------------cchHHHHHHHHHHHH
Confidence 9988653 1115899999986643211 013 79999998888
Q ss_pred HHHHHhh-----cCCcEEEEecCeeeec
Q psy7538 235 LVAECME-----LGMPCMILRPSIVVPI 257 (543)
Q Consensus 235 ~v~~~~~-----~~lp~~IlRps~V~G~ 257 (543)
+.+..+. +++.+..+.||.|-.+
T Consensus 196 ~~~~la~el~~~~gI~vn~v~PG~v~T~ 223 (329)
T 3lt0_A 196 DTRVLAYHLGRNYNIRINTISAGPLKSR 223 (329)
T ss_dssp HHHHHHHHHHHHHCCEEEEEEECCCCCH
T ss_pred HHHHHHHHhCCccCeEEEEEecceeech
Confidence 7765432 3899999999988654
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=6.2e-09 Score=106.54 Aligned_cols=172 Identities=15% Similarity=-0.004 Sum_probs=115.0
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHh-hCCCcCEEEEEecCCCCCCH---------HHHHHHHhcCchhHHHHhhcCcCCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILR-LEPNVKKIYLLMRTKKGKTP---------NQRVEELFESPVFDALKTLRGKSIL 97 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~-~g~~v~~V~~l~R~~~~~~~---------~~rl~~~~~~~~f~~l~~~~~~~~~ 97 (543)
-.+|+++||||++-||.++++.|.+ .|. +|.+..|....... .+.+.+. ++ ...
T Consensus 45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA---~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~--------~~-----~~G 108 (405)
T 3zu3_A 45 NGPKRVLVIGASTGYGLAARITAAFGCGA---DTLGVFFERPGEEGKPGTSGWYNSAAFHKF--------AA-----QKG 108 (405)
T ss_dssp TCCSEEEEESCSSHHHHHHHHHHHHHHCC---EEEEEECCCCCBTTBCCCHHHHHHHHHHHH--------HH-----HTT
T ss_pred CCCCEEEEeCcchHHHHHHHHHHHHhcCC---EEEEEeCCchhhhhhcccccchhHHHHHHH--------HH-----hcC
Confidence 3589999999999999999999999 986 78888886543211 0111111 11 112
Q ss_pred CceEEEEccCCCCCCCCCHHHHHHHhc-------CccEEEEcCccC----------------CC----------------
Q psy7538 98 QKIQVISGDITQLKLGISEIDKKELID-------NVDIVYHVAATI----------------RF---------------- 138 (543)
Q Consensus 98 ~~v~~i~gDl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v----------------~~---------------- 138 (543)
.++..+.+|+++++ +++.+++ .+|++||+||.. .+
T Consensus 109 ~~a~~i~~Dvtd~~------~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~ 182 (405)
T 3zu3_A 109 LYAKSINGDAFSDE------IKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVI 182 (405)
T ss_dssp CCEEEEESCTTSHH------HHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEE
T ss_pred CceEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEEcCccccccCcccccccccccccccccccccccccccccc
Confidence 46788999999875 5555543 589999999863 11
Q ss_pred ---------cccHHHHHHHHHHHHH-HHHHHHHhcc---CCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhc
Q psy7538 139 ---------DEPIKTAVILNTRGTR-DMLELSKQMK---NLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESM 205 (543)
Q Consensus 139 ---------~~~~~~~~~~Nv~gt~-~ll~~a~~~~---~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~ 205 (543)
.+.++..+++|..++. .+++.+.... +-.++|.+||..+.... |.
T Consensus 183 ~~~~i~~~t~ee~~~~v~Vn~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~----------p~------------ 240 (405)
T 3zu3_A 183 KESVLQPATQSEIDSTVAVMGGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITH----------DI------------ 240 (405)
T ss_dssp EEEEECCCCHHHHHHHHHHHSSHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGT----------TT------------
T ss_pred ccccCCCCCHHHHHHHHHhhchhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcC----------CC------------
Confidence 1345567788877765 5555543210 11479999998553211 00
Q ss_pred chhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----c-CCcEEEEecCeeeec
Q psy7538 206 KEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----L-GMPCMILRPSIVVPI 257 (543)
Q Consensus 206 ~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~-~lp~~IlRps~V~G~ 257 (543)
.+..+|+.||+..+.+.+..+. . |+.+..+-|+.|-.+
T Consensus 241 --------------~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~ 283 (405)
T 3zu3_A 241 --------------YWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQ 283 (405)
T ss_dssp --------------TTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCH
T ss_pred --------------ccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCc
Confidence 0116899999999988877654 6 899999999977443
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=98.98 E-value=3.1e-09 Score=116.31 Aligned_cols=208 Identities=14% Similarity=0.128 Sum_probs=134.0
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||++-||+.+++.|.+.|. +|++..|... ++-.+++ +. ...++..+.+|+
T Consensus 320 l~gkvalVTGas~GIG~a~A~~la~~Ga---~Vv~~~~~~~----~~~~~~i---------~~-----~g~~~~~~~~Dv 378 (604)
T 2et6_A 320 LKDKVVLITGAGAGLGKEYAKWFAKYGA---KVVVNDFKDA----TKTVDEI---------KA-----AGGEAWPDQHDV 378 (604)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEECSSCC----HHHHHHH---------HH-----TTCEEEEECCCH
T ss_pred cCCCeEEEECcchHHHHHHHHHHHHCCC---EEEEEeCccH----HHHHHHH---------Hh-----cCCeEEEEEcCh
Confidence 6789999999999999999999999997 7777776321 1111121 11 123566778888
Q ss_pred -CCCCCCCCHHHHHHH---hcCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEEEEe
Q psy7538 108 -TQLKLGISEIDKKEL---IDNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFTYIS 173 (543)
Q Consensus 108 -~~~~lgls~~~~~~l---~~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~vS 173 (543)
++.+ .-++.+ +..+|++||+||.... .+.++..+++|+.|+.++.+++... .+-.++|++|
T Consensus 379 ~~~~~-----~~~~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnis 453 (604)
T 2et6_A 379 AKDSE-----AIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINIT 453 (604)
T ss_dssp HHHHH-----HHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHH-----HHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEC
Confidence 4321 112222 3469999999997532 2456778999999999988877532 2346899999
Q ss_pred cCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEEE
Q psy7538 174 TAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMIL 249 (543)
Q Consensus 174 T~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~Il 249 (543)
|..+..... . ...|+.||+....+.+..+. +|+.+..+
T Consensus 454 S~ag~~~~~----------~----------------------------~~~Y~asKaal~~lt~~la~El~~~gIrVn~v 495 (604)
T 2et6_A 454 STSGIYGNF----------G----------------------------QANYSSSKAGILGLSKTMAIEGAKNNIKVNIV 495 (604)
T ss_dssp CHHHHSCCT----------T----------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred ChhhccCCC----------C----------------------------ChhHHHHHHHHHHHHHHHHHHhCccCeEEEEE
Confidence 985532210 0 05899999988887766544 68999999
Q ss_pred ecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEee
Q psy7538 250 RPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLT 329 (543)
Q Consensus 250 Rps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~ 329 (543)
.|+. .+ +.. .. ... ....+....+|+|++++.++..... ..|+++.+.
T Consensus 496 ~PG~--~T---~m~---~~------~~~--------------~~~~~~~~pe~vA~~v~~L~s~~~~----itG~~~~vd 543 (604)
T 2et6_A 496 APHA--ET---AMT---LS------IMR--------------EQDKNLYHADQVAPLLVYLGTDDVP----VTGETFEIG 543 (604)
T ss_dssp EECC--CC---CC--------------------------------CCSSCGGGTHHHHHHTTSTTCC----CCSCEEEEE
T ss_pred cCCC--CC---ccc---cc------cCc--------------hhhccCCCHHHHHHHHHHHhCCccC----CCCcEEEEC
Confidence 9982 22 110 00 000 0011234678899988776644321 357788776
Q ss_pred cC
Q psy7538 330 SN 331 (543)
Q Consensus 330 s~ 331 (543)
++
T Consensus 544 GG 545 (604)
T 2et6_A 544 GG 545 (604)
T ss_dssp TT
T ss_pred CC
Confidence 65
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=98.95 E-value=1e-08 Score=105.89 Aligned_cols=171 Identities=12% Similarity=0.017 Sum_probs=112.4
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHh-hCCCcCEEEEEecCCCCCCH---------HHHHHHHhcCchhHHHHhhcCcCCCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILR-LEPNVKKIYLLMRTKKGKTP---------NQRVEELFESPVFDALKTLRGKSILQ 98 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~-~g~~v~~V~~l~R~~~~~~~---------~~rl~~~~~~~~f~~l~~~~~~~~~~ 98 (543)
.+|++|||||++-||.++++.|.+ .|. +|.+..|....... .+.+.+ .++ ....
T Consensus 60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA---~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~--------~~~-----~~G~ 123 (422)
T 3s8m_A 60 GPKKVLVIGASSGYGLASRITAAFGFGA---DTLGVFFEKPGTASKAGTAGWYNSAAFDK--------HAK-----AAGL 123 (422)
T ss_dssp SCSEEEEESCSSHHHHHHHHHHHHHHCC---EEEEEECCCCCCSSSCCCHHHHHHHHHHH--------HHH-----HTTC
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhCCC---EEEEEeCCchhhhhhhcccccchhHHHHH--------HHH-----hcCC
Confidence 489999999999999999999999 986 78888887654321 011111 111 1124
Q ss_pred ceEEEEccCCCCCCCCCHHHHHHHh--------cCccEEEEcCccC----------------CC----------------
Q psy7538 99 KIQVISGDITQLKLGISEIDKKELI--------DNVDIVYHVAATI----------------RF---------------- 138 (543)
Q Consensus 99 ~v~~i~gDl~~~~lgls~~~~~~l~--------~~vd~ViH~AA~v----------------~~---------------- 138 (543)
++..+.+|+++++ +++.++ ..+|++||+||.. .+
T Consensus 124 ~a~~i~~Dvtd~~------~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~ 197 (422)
T 3s8m_A 124 YSKSINGDAFSDA------ARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTI 197 (422)
T ss_dssp CEEEEESCTTSHH------HHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEE
T ss_pred cEEEEEecCCCHH------HHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccc
Confidence 6788999999875 444443 4589999999862 11
Q ss_pred ---------cccHHHHHHHHHHHHH-HHHHHHHhcc---CCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhc
Q psy7538 139 ---------DEPIKTAVILNTRGTR-DMLELSKQMK---NLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESM 205 (543)
Q Consensus 139 ---------~~~~~~~~~~Nv~gt~-~ll~~a~~~~---~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~ 205 (543)
.+.++..+++|..++. .+++.+.... +-.++|.+||..+....
T Consensus 198 ~~~~~~~~t~e~~~~~v~Vn~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~------------------------ 253 (422)
T 3s8m_A 198 IQASIEPASAQEIEDTITVMGGQDWELWIDALEGAGVLADGARSVAFSYIGTEITW------------------------ 253 (422)
T ss_dssp EEEEECCCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGH------------------------
T ss_pred cccccCCCCHHHHHHHHHhhchhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccC------------------------
Confidence 1234445666666554 5555554321 11479999998553210
Q ss_pred chhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEEEecCeeeec
Q psy7538 206 KEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMILRPSIVVPI 257 (543)
Q Consensus 206 ~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~IlRps~V~G~ 257 (543)
|. .+...|+.||+..+.+.+..+. +|+.+..+.|+.|-.+
T Consensus 254 ---------p~---~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~ 297 (422)
T 3s8m_A 254 ---------PI---YWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQ 297 (422)
T ss_dssp ---------HH---HTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCT
T ss_pred ---------CC---ccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcCh
Confidence 00 0015799999999888876654 6899999999987544
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=2.3e-08 Score=103.89 Aligned_cols=172 Identities=13% Similarity=-0.024 Sum_probs=112.1
Q ss_pred cCCCEEEEEcCcchhHHH--HHHHHHhhCCCcCEEEEEecCCCCCCH---------HHHHHHHhcCchhHHHHhhcCcCC
Q psy7538 28 YENKSIFLSGGSGFLGKV--LIEKILRLEPNVKKIYLLMRTKKGKTP---------NQRVEELFESPVFDALKTLRGKSI 96 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~--Lv~~Ll~~g~~v~~V~~l~R~~~~~~~---------~~rl~~~~~~~~f~~l~~~~~~~~ 96 (543)
..||+++||||++-||.+ +++.|.+.|. +|+++.|....... .+.+++.. ...
T Consensus 58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga---~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~ 121 (418)
T 4eue_A 58 RGPKKVLIVGASSGFGLATRISVAFGGPEA---HTIGVSYETGATDRRIGTAGWYNNIFFKEFA-------------KKK 121 (418)
T ss_dssp CCCSEEEEESCSSHHHHHHHHHHHHSSSCC---EEEEEECCCCCCSSCCCCHHHHHHHHHHHHH-------------HHT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHHhCCC---EEEEEecCcchhhhcccccccchHHHHHHHH-------------HHc
Confidence 579999999999999999 9999999886 78888887644220 12332221 112
Q ss_pred CCceEEEEccCCCCCCCCCHHHHHHHhc-------CccEEEEcCccC----------------CC---------------
Q psy7538 97 LQKIQVISGDITQLKLGISEIDKKELID-------NVDIVYHVAATI----------------RF--------------- 138 (543)
Q Consensus 97 ~~~v~~i~gDl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v----------------~~--------------- 138 (543)
..++..+.+|+++++ +++.+++ .+|++||+||.. .+
T Consensus 122 g~~~~~~~~Dvtd~~------~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~ 195 (418)
T 4eue_A 122 GLVAKNFIEDAFSNE------TKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDE 195 (418)
T ss_dssp TCCEEEEESCTTCHH------HHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTE
T ss_pred CCcEEEEEeeCCCHH------HHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccc
Confidence 246889999999875 5555443 589999999863 01
Q ss_pred ----------cccHHHHHHHHHHHHH-HHHHHHHhcc---CCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhh
Q psy7538 139 ----------DEPIKTAVILNTRGTR-DMLELSKQMK---NLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAES 204 (543)
Q Consensus 139 ----------~~~~~~~~~~Nv~gt~-~ll~~a~~~~---~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~ 204 (543)
.+.++..+++|..+.. .+++.+.... +-.++|.+||..+.... |.
T Consensus 196 ~~~~~~~~~t~e~~~~~~~vn~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~----------p~----------- 254 (418)
T 4eue_A 196 ITLKKVSSASIEEIEETRKVMGGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTY----------KI----------- 254 (418)
T ss_dssp EEEEEECBCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGT----------TT-----------
T ss_pred cccccccCCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCC----------Cc-----------
Confidence 1233445666655554 4555544321 11478999987542210 00
Q ss_pred cchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-----cCCcEEEEecCeeeec
Q psy7538 205 MKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-----LGMPCMILRPSIVVPI 257 (543)
Q Consensus 205 ~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-----~~lp~~IlRps~V~G~ 257 (543)
.+..+|+.||+..+.+.+..+. .|+.+.++.|+.|-.+
T Consensus 255 ---------------~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T~ 297 (418)
T 4eue_A 255 ---------------YREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVTK 297 (418)
T ss_dssp ---------------TTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCCH
T ss_pred ---------------cccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcCh
Confidence 0116899999988877765443 3799999999877443
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=98.88 E-value=1.4e-08 Score=111.09 Aligned_cols=168 Identities=13% Similarity=0.130 Sum_probs=108.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCC---CHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEE
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGK---TPNQRVEELFESPVFDALKTLRGKSILQKIQVIS 104 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~---~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~ 104 (543)
++||+++||||++-||+.+++.|.+.|. +|++..|..... ...+++++. -+.++.. ..+. .
T Consensus 6 l~gkvalVTGas~GIG~a~A~~la~~Ga---~Vv~~~~~~~~~~~gr~~~~~~~~-----~~~i~~~-----g~~~---~ 69 (604)
T 2et6_A 6 FKDKVVIITGAGGGLGKYYSLEFAKLGA---KVVVNDLGGALNGQGGNSKAADVV-----VDEIVKN-----GGVA---V 69 (604)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEECC-----------CHHHHH-----HHHHHHT-----TCEE---E
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCC---EEEEEeCCccccccccchHHHHHH-----HHHHHhc-----CCeE---E
Confidence 5789999999999999999999999997 788877754100 000122211 1111111 1122 2
Q ss_pred ccCCCCCCCCCHHH-HHHH---hcCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHh-c--cCCceEE
Q psy7538 105 GDITQLKLGISEID-KKEL---IDNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQ-M--KNLKCFT 170 (543)
Q Consensus 105 gDl~~~~lgls~~~-~~~l---~~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--~~l~~~V 170 (543)
.|+++.+ +.+. ++.+ +..+|++||+||.... .+.++..+++|+.|+..+.+++.. + .+-.++|
T Consensus 70 ~d~~d~~---~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IV 146 (604)
T 2et6_A 70 ADYNNVL---DGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIV 146 (604)
T ss_dssp EECCCTT---CHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred EEcCCHH---HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEE
Confidence 4666654 1111 2222 3469999999997532 245677899999999998887743 1 1346899
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... ....|+.||+..+.+.+..+. +|+.+
T Consensus 147 nisS~ag~~~~~--------------------------------------~~~~Y~asKaal~~lt~~la~El~~~gIrV 188 (604)
T 2et6_A 147 NTSSPAGLYGNF--------------------------------------GQANYASAKSALLGFAETLAKEGAKYNIKA 188 (604)
T ss_dssp EECCHHHHHCCT--------------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred EECCHHHcCCCC--------------------------------------CchHHHHHHHHHHHHHHHHHHHhCccCeEE
Confidence 999985532110 005899999988888776544 68999
Q ss_pred EEEecC
Q psy7538 247 MILRPS 252 (543)
Q Consensus 247 ~IlRps 252 (543)
..+.|+
T Consensus 189 n~v~Pg 194 (604)
T 2et6_A 189 NAIAPL 194 (604)
T ss_dssp EEEEEC
T ss_pred EEEccC
Confidence 999996
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=98.84 E-value=1.1e-08 Score=127.68 Aligned_cols=170 Identities=18% Similarity=0.248 Sum_probs=119.6
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHH-HHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQ-RVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~-rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
|-.+|+++||||+|-||..+++.|.+.|. +.|.++.|+.......+ .++++ + ....++.++.+
T Consensus 1881 ~~~~k~~lITGgs~GIG~aia~~la~~Ga--~~vvl~~R~~~~~~~~~~~~~~l---------~-----~~g~~v~~~~~ 1944 (2512)
T 2vz8_A 1881 CPPHKSYVITGGLGGFGLQLAQWLRLRGA--QKLVLTSRSGIRTGYQARQVREW---------R-----RQGVQVLVSTS 1944 (2512)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTC--CEEEEECSSCCCSHHHHHHHHHH---------H-----HTTCEEEEECC
T ss_pred cCCCCEEEEECCCCCHHHHHHHHHHHCCC--CEEEEEeCCCcchHHHHHHHHHH---------H-----hCCCEEEEEec
Confidence 55789999999999999999999999986 35888888764432111 12221 1 11247888999
Q ss_pred cCCCCCCCCCHHHHHHHhc------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHh-ccCCceEEE
Q psy7538 106 DITQLKLGISEIDKKELID------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQ-MKNLKCFTY 171 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-~~~l~~~V~ 171 (543)
|+++++ +++.+++ .+|+|||+|+.... .+.++..+++|+.|+.++.+++.. ++...+||+
T Consensus 1945 Dvsd~~------~v~~~~~~~~~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~ 2018 (2512)
T 2vz8_A 1945 NASSLD------GARSLITEATQLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVI 2018 (2512)
T ss_dssp CSSSHH------HHHHHHHHHHHHSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEE
T ss_pred CCCCHH------HHHHHHHHHHhcCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEE
Confidence 999875 5555443 58999999996532 244566789999999999888765 345689999
Q ss_pred EecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEec
Q psy7538 172 ISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRP 251 (543)
Q Consensus 172 vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRp 251 (543)
+||..+..... ....|+.+|+..+.+.+.....|+|...+-.
T Consensus 2019 iSS~ag~~g~~--------------------------------------g~~~Y~aaKaal~~l~~~rr~~Gl~~~a~~~ 2060 (2512)
T 2vz8_A 2019 FSSVSCGRGNA--------------------------------------GQANYGFANSAMERICEKRRHDGLPGLAVQW 2060 (2512)
T ss_dssp ECCHHHHTTCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHTTSCCCEEEE
T ss_pred ecchhhcCCCC--------------------------------------CcHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence 99986542211 0158999999999998865556899888887
Q ss_pred Ceeee
Q psy7538 252 SIVVP 256 (543)
Q Consensus 252 s~V~G 256 (543)
+.+.+
T Consensus 2061 g~~~~ 2065 (2512)
T 2vz8_A 2061 GAIGD 2065 (2512)
T ss_dssp CCBCT
T ss_pred cCcCC
Confidence 76543
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=98.77 E-value=6e-09 Score=105.49 Aligned_cols=186 Identities=11% Similarity=0.065 Sum_probs=108.5
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCC----CcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEP----NVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~----~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
.++|+||||+||+|++++..|+..+. .+.+|.++++.+. ..++|++.. -..|. ..... . .+
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~--~~~~~~~g~-----~~dl~----~~~~~-~---~~ 69 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNE--KAQKALQGV-----MMEID----DCAFP-L---LA 69 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCH--HHHHHHHHH-----HHHHH----TTTCT-T---EE
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCc--cccccchhh-----HHHHh----hhccc-c---cC
Confidence 47999999999999999999998753 1236887766510 001222210 00010 00001 1 13
Q ss_pred cCCCCCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCc-eEEEEecC-ccccCCC
Q psy7538 106 DITQLKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLK-CFTYISTA-YCHPSEK 182 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~-~~V~vST~-y~~~~~~ 182 (543)
|+.... ++...++++|+|||+|+..+- .....+....|+.+++++++.+.+..+.+ +||++|.- ...+.
T Consensus 70 ~i~~~~------~~~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~-- 141 (329)
T 1b8p_A 70 GMTAHA------DPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAY-- 141 (329)
T ss_dssp EEEEES------SHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHH--
T ss_pred cEEEec------CcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHH--
Confidence 444332 577888999999999997653 34456788999999999999999872245 78888752 11100
Q ss_pred cccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCC-C
Q psy7538 183 VLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYK-E 260 (543)
Q Consensus 183 ~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~-~ 260 (543)
...+. .+-++ +. +.|+.|+....++....++ .|++..-++...|+|... .
T Consensus 142 ~~~~~--~~~~p--------------------~~------~v~g~t~Ld~~r~~~~la~~lgv~~~~v~~~~v~G~Hg~s 193 (329)
T 1b8p_A 142 IAMKS--APSLP--------------------AK------NFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNHSPT 193 (329)
T ss_dssp HHHHT--CTTSC--------------------GG------GEEECCHHHHHHHHHHHHHHHTCCGGGEESCEEEBCSSTT
T ss_pred HHHHH--cCCCC--------------------HH------HEEEeecHHHHHHHHHHHHHhCcCHHHceEEEEEeccCCc
Confidence 00000 00000 00 3566666666666655555 477777777766777432 2
Q ss_pred CCCCCC
Q psy7538 261 PLPGWT 266 (543)
Q Consensus 261 p~~gw~ 266 (543)
-+|-|.
T Consensus 194 ~~p~~s 199 (329)
T 1b8p_A 194 MYADYR 199 (329)
T ss_dssp CEEECS
T ss_pred EeeehH
Confidence 244443
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=98.74 E-value=1.4e-08 Score=102.03 Aligned_cols=122 Identities=13% Similarity=0.121 Sum_probs=80.5
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|+||||+||+|++++..|+..+. +.++.+++++.. .+|++... . .+.... +.....+.+..+| +
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~-~~el~L~Di~~~----~~~~~~~~----~-dl~~~~-~~~~~~~~i~~~~--d- 66 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPF-MKDLVLIGREHS----INKLEGLR----E-DIYDAL-AGTRSDANIYVES--D- 66 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTT-CCEEEEEECGGG----HHHHHHHH----H-HHHHHH-TTSCCCCEEEEEE--T-
T ss_pred CEEEEECCCChhHHHHHHHHHhCCC-CCEEEEEcCCCc----hhhhHHHH----H-HHHHhH-HhcCCCeEEEeCC--c-
Confidence 5899999999999999999998764 346777777321 12222100 0 000000 1111223333222 0
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecC
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTA 175 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~ 175 (543)
++...++++|+|||+|+..+- .....+..+.|+.+++++++++++. + +++|+++|-
T Consensus 67 -------~l~~al~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~-~-~~~vlv~SN 123 (313)
T 1hye_A 67 -------ENLRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEI-C-DTKIFVITN 123 (313)
T ss_dssp -------TCGGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-C-CCEEEECSS
T ss_pred -------chHHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-C-CeEEEEecC
Confidence 134567899999999997653 3445678999999999999999998 6 889999884
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=98.70 E-value=6.6e-08 Score=97.62 Aligned_cols=119 Identities=10% Similarity=0.051 Sum_probs=82.9
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
+.|+|+||||+||+|..++..|+..|. +.+|.++++.+. .....++.+ .....++..+.+
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~-~~ev~l~Di~~~----~~~~~dL~~------------~~~~~~v~~~~~--- 66 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPL-VSVLHLYDVVNA----PGVTADISH------------MDTGAVVRGFLG--- 66 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTT-EEEEEEEESSSH----HHHHHHHHT------------SCSSCEEEEEES---
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCC-CCEEEEEeCCCc----HhHHHHhhc------------ccccceEEEEeC---
Confidence 347999999999999999999988763 347888876542 111112211 011112222211
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecC
Q psy7538 109 QLKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTA 175 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~ 175 (543)
.+++...++++|+|||+|+..+- .....+....|+.+++++++.+.+. +.+++|+++|-
T Consensus 67 -------t~d~~~al~gaDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~-~p~~~viv~SN 126 (326)
T 1smk_A 67 -------QQQLEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKC-CPRAIVNLISN 126 (326)
T ss_dssp -------HHHHHHHHTTCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCS
T ss_pred -------CCCHHHHcCCCCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEECC
Confidence 13677888999999999997653 3334567899999999999999998 67889999874
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=98.68 E-value=8.9e-08 Score=80.89 Aligned_cols=95 Identities=13% Similarity=0.087 Sum_probs=71.4
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
.+++|+|+|+ |++|+.+++.|++.|. .+|+++.|+. ++++.+. ..++..+.+|++
T Consensus 4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~--~~v~~~~r~~------~~~~~~~----------------~~~~~~~~~d~~ 58 (118)
T 3ic5_A 4 MRWNICVVGA-GKIGQMIAALLKTSSN--YSVTVADHDL------AALAVLN----------------RMGVATKQVDAK 58 (118)
T ss_dssp TCEEEEEECC-SHHHHHHHHHHHHCSS--EEEEEEESCH------HHHHHHH----------------TTTCEEEECCTT
T ss_pred CcCeEEEECC-CHHHHHHHHHHHhCCC--ceEEEEeCCH------HHHHHHH----------------hCCCcEEEecCC
Confidence 3579999999 9999999999999971 2789999863 3333221 135677889998
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEE
Q psy7538 109 QLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFT 170 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V 170 (543)
+++ ++..+++++|+|||+++.. .+..+++.|.+. +++.|.
T Consensus 59 ~~~------~~~~~~~~~d~vi~~~~~~---------------~~~~~~~~~~~~-g~~~~~ 98 (118)
T 3ic5_A 59 DEA------GLAKALGGFDAVISAAPFF---------------LTPIIAKAAKAA-GAHYFD 98 (118)
T ss_dssp CHH------HHHHHTTTCSEEEECSCGG---------------GHHHHHHHHHHT-TCEEEC
T ss_pred CHH------HHHHHHcCCCEEEECCCch---------------hhHHHHHHHHHh-CCCEEE
Confidence 764 7888899999999998531 135688888887 766554
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=98.58 E-value=2.8e-07 Score=92.07 Aligned_cols=119 Identities=13% Similarity=0.035 Sum_probs=81.0
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|+||||+||+|..++..|+..+. +.++.+++++.. .+|++... ..|.... . ...++.+..+| .
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~-~~el~L~Di~~~----~~~~~~~~-----~dl~~~~-~-~~~~~~v~~~~---~ 65 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDI-ADEVVFVDIPDK----EDDTVGQA-----ADTNHGI-A-YDSNTRVRQGG---Y 65 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-CSEEEEECCGGG----HHHHHHHH-----HHHHHHH-T-TTCCCEEEECC---G
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-CCEEEEEcCCCC----hhhHHHHH-----HHHHHHH-h-hCCCcEEEeCC---H
Confidence 5899999999999999999998764 346877777221 23332110 1111111 1 12234443322 1
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecC
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTA 175 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~ 175 (543)
..++++|+|||+|+..+- .+...+....|+.+++++++.+++. +.+++|+++|-
T Consensus 66 ----------~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~-~p~~~viv~SN 120 (303)
T 1o6z_A 66 ----------EDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH-NDDYISLTTSN 120 (303)
T ss_dssp ----------GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTT-CSCCEEEECCS
T ss_pred ----------HHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEeCC
Confidence 346899999999997653 3445567899999999999999998 78899999875
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=98.32 E-value=4.3e-06 Score=104.75 Aligned_cols=171 Identities=8% Similarity=0.028 Sum_probs=109.3
Q ss_pred hcCCCEEEEEcCcch-hHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 27 TYENKSIFLSGGSGF-LGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 27 ~~~~~~VlITGatGF-iG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
.++||+++||||++- ||+++++.|++.|. +|++..|+.... ..+.++++ ..+. .....++..+.+
T Consensus 2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA---~Vvi~~r~~~~~-~~~~~~~l---------~~~l-~~~G~~~~~v~~ 2198 (3089)
T 3zen_D 2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGA---TVIATTSRLDDD-RLAFYKQL---------YRDH-ARFDATLWVVPA 2198 (3089)
T ss_dssp CCCCCEEEEESCCTTSHHHHHHHHHHHTTC---EEEEEESCCSHH-HHHHHHHH---------HHHH-CCTTCEEEEEEC
T ss_pred cCCCCEEEEeCCChhHHHHHHHHHHHHCCC---EEEEEeCChhhh-hhHHHHHH---------HHHH-hhcCCeEEEEEe
Confidence 389999999999999 99999999999996 888888875321 01112221 1111 222356888999
Q ss_pred cCCCCCCCCCHHHHHHHh----c-------CccEEEEcCcc----CC------------CcccHHHHHHHHHHHHHHHHH
Q psy7538 106 DITQLKLGISEIDKKELI----D-------NVDIVYHVAAT----IR------------FDEPIKTAVILNTRGTRDMLE 158 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~----~-------~vd~ViH~AA~----v~------------~~~~~~~~~~~Nv~gt~~ll~ 158 (543)
|+++++ +++.++ + .+|++||+||. .. ++...+..+++|+.++..++.
T Consensus 2199 Dvtd~~------~v~~lv~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~ 2272 (3089)
T 3zen_D 2199 NMASYS------DIDKLVEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLIS 2272 (3089)
T ss_dssp CTTCHH------HHHHHHHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHH
T ss_pred cCCCHH------HHHHHHHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999875 666553 2 47999999997 11 112234458999999988887
Q ss_pred HHHhc---cCCc---eEEEEec-CccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHH
Q psy7538 159 LSKQM---KNLK---CFTYIST-AYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCL 231 (543)
Q Consensus 159 ~a~~~---~~l~---~~V~vST-~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~ 231 (543)
.+... .+.. .+|..+| ..+... ....|+.||+.
T Consensus 2273 ~~~~~m~~~~~g~~~~ii~~~ss~~g~~g----------------------------------------~~~aYsASKaA 2312 (3089)
T 3zen_D 2273 GLSKIGAERDIASRLHVVLPGSPNRGMFG----------------------------------------GDGAYGEAKSA 2312 (3089)
T ss_dssp HHHHHHHHTTCCCCEEEEEEECSSTTSCS----------------------------------------SCSSHHHHGGG
T ss_pred HHHHHHHHcCCCceeEEEEECCcccccCC----------------------------------------CchHHHHHHHH
Confidence 76542 1211 1222222 111000 01479999999
Q ss_pred HHHHHHHHhh-----cCCcEEEEecCeeeec
Q psy7538 232 AEGLVAECME-----LGMPCMILRPSIVVPI 257 (543)
Q Consensus 232 aE~~v~~~~~-----~~lp~~IlRps~V~G~ 257 (543)
.+.+.+..+. .++.++.+.|+.|-++
T Consensus 2313 l~~LtrslA~E~~~a~~IrVn~v~PG~v~tT 2343 (3089)
T 3zen_D 2313 LDALENRWSAEKSWAERVSLAHALIGWTKGT 2343 (3089)
T ss_dssp HHHHHHHHHHCSTTTTTEEEEEEECCCEECS
T ss_pred HHHHHHHHHhccccCCCeEEEEEeecccCCC
Confidence 8888776554 2467777888777543
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=98.32 E-value=1.6e-06 Score=91.22 Aligned_cols=109 Identities=18% Similarity=0.234 Sum_probs=74.8
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+||| +|++|+++++.|++.|. +|++..|.. ++.+++ .....++..+.+|+
T Consensus 1 M~~k~VlViG-aG~iG~~ia~~L~~~G~---~V~v~~R~~------~~a~~l--------------a~~~~~~~~~~~Dv 56 (450)
T 1ff9_A 1 MATKSVLMLG-SGFVTRPTLDVLTDSGI---KVTVACRTL------ESAKKL--------------SAGVQHSTPISLDV 56 (450)
T ss_dssp -CCCEEEEEC-CSTTHHHHHHHHHTTTC---EEEEEESSH------HHHHHT--------------TTTCTTEEEEECCT
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhCcC---EEEEEECCH------HHHHHH--------------HHhcCCceEEEeec
Confidence 3578999998 89999999999999875 788888863 333322 11123467888999
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHH--H-------HHHHHHHHHHHHhccCCc
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVIL--N-------TRGTRDMLELSKQMKNLK 167 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~--N-------v~gt~~ll~~a~~~~~l~ 167 (543)
++.+ ++..+++++|+|||+|+......-...+++. | ..++.+++++|++. +++
T Consensus 57 ~d~~------~l~~~l~~~DvVIn~a~~~~~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~a-Gv~ 118 (450)
T 1ff9_A 57 NDDA------ALDAEVAKHDLVISLIPYTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDA-GIT 118 (450)
T ss_dssp TCHH------HHHHHHTTSSEEEECCC--CHHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHT-TCE
T ss_pred CCHH------HHHHHHcCCcEEEECCccccchHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHC-CCe
Confidence 8764 7888889999999999864221111222332 2 24678999999997 654
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=3.9e-06 Score=82.98 Aligned_cols=83 Identities=13% Similarity=0.192 Sum_probs=61.9
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||+|.+|+++++.|++.|. +|++..|+. +|.+++.+ .+... .++.++.+|+
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~---~V~i~~R~~------~~~~~l~~-----~~~~~------~~~~~~~~D~ 176 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGA---EVVLCGRKL------DKAQAAAD-----SVNKR------FKVNVTAAET 176 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESSH------HHHHHHHH-----HHHHH------HTCCCEEEEC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcC---EEEEEECCH------HHHHHHHH-----HHHhc------CCcEEEEecC
Confidence 5789999999999999999999999986 688999863 33332211 11110 1345677898
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCccC
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAATI 136 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~v 136 (543)
++++ ++..+++++|+|||+|+..
T Consensus 177 ~~~~------~~~~~~~~~DvlVn~ag~g 199 (287)
T 1lu9_A 177 ADDA------SRAEAVKGAHFVFTAGAIG 199 (287)
T ss_dssp CSHH------HHHHHTTTCSEEEECCCTT
T ss_pred CCHH------HHHHHHHhCCEEEECCCcc
Confidence 8764 7888889999999999853
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=98.04 E-value=9e-06 Score=77.08 Aligned_cols=81 Identities=19% Similarity=0.308 Sum_probs=54.8
Q ss_pred CCCEEEEEcC----------------cchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhc
Q psy7538 29 ENKSIFLSGG----------------SGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLR 92 (543)
Q Consensus 29 ~~~~VlITGa----------------tGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~ 92 (543)
+||+|+|||| ||.+|.++++.+++.|. +|.++.|+..-.
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga---~V~lv~~~~~~~---------------------- 56 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGY---EVCLITTKRALK---------------------- 56 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTC---EEEEEECTTSCC----------------------
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCC---EEEEEeCCcccc----------------------
Confidence 5899999999 99999999999999997 788899875321
Q ss_pred CcCCCCceEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCc
Q psy7538 93 GKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFD 139 (543)
Q Consensus 93 ~~~~~~~v~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~ 139 (543)
+.....+..+..+-.+.- .+.+...+.++|++||+||...|.
T Consensus 57 -~~~~~~~~~~~v~s~~em----~~~v~~~~~~~Dili~aAAvsD~~ 98 (232)
T 2gk4_A 57 -PEPHPNLSIREITNTKDL----LIEMQERVQDYQVLIHSMAVSDYT 98 (232)
T ss_dssp -CCCCTTEEEEECCSHHHH----HHHHHHHGGGCSEEEECSBCCSEE
T ss_pred -ccCCCCeEEEEHhHHHHH----HHHHHHhcCCCCEEEEcCcccccc
Confidence 111234555543321110 012333445799999999987664
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=97.97 E-value=1.3e-05 Score=69.81 Aligned_cols=101 Identities=16% Similarity=0.196 Sum_probs=66.5
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
++++|+|+|+ |.+|+.+++.|.+.|+ +|+++.|.. ++++.+ . ......+.+|.+
T Consensus 5 ~~~~v~I~G~-G~iG~~~a~~l~~~g~---~v~~~d~~~------~~~~~~--------------~--~~~~~~~~~d~~ 58 (144)
T 2hmt_A 5 KNKQFAVIGL-GRFGGSIVKELHRMGH---EVLAVDINE------EKVNAY--------------A--SYATHAVIANAT 58 (144)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTC---CCEEEESCH------HHHHTT--------------T--TTCSEEEECCTT
T ss_pred cCCcEEEECC-CHHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHH--------------H--HhCCEEEEeCCC
Confidence 5678999998 9999999999999986 566777753 222211 0 113456788887
Q ss_pred CCCCCCCHHHHHHH-hcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecC
Q psy7538 109 QLKLGISEIDKKEL-IDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTA 175 (543)
Q Consensus 109 ~~~lgls~~~~~~l-~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~ 175 (543)
+++ .+..+ ++++|+||++++.. . +.|. .+.+.|++. +++++|..++.
T Consensus 59 ~~~------~l~~~~~~~~d~vi~~~~~~-----~----~~~~----~~~~~~~~~-~~~~ii~~~~~ 106 (144)
T 2hmt_A 59 EEN------ELLSLGIRNFEYVIVAIGAN-----I----QAST----LTTLLLKEL-DIPNIWVKAQN 106 (144)
T ss_dssp CHH------HHHTTTGGGCSEEEECCCSC-----H----HHHH----HHHHHHHHT-TCSEEEEECCS
T ss_pred CHH------HHHhcCCCCCCEEEECCCCc-----h----HHHH----HHHHHHHHc-CCCeEEEEeCC
Confidence 643 56554 67899999998641 1 2222 356677777 56666655554
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=97.94 E-value=0.00014 Score=72.77 Aligned_cols=114 Identities=14% Similarity=0.056 Sum_probs=76.5
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|.|+||+|++|..++..|+..+. +.+|.++++.+ .+....++.+. ....++....+ .
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~-~~ev~L~Di~~----~~~~a~dL~~~------------~~~~~l~~~~~----t 59 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPL-VSRLTLYDIAH----TPGVAADLSHI------------ETRATVKGYLG----P 59 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTT-CSEEEEEESSS----HHHHHHHHTTS------------SSSCEEEEEES----G
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-CcEEEEEeCCc----cHHHHHHHhcc------------CcCceEEEecC----C
Confidence 5899999999999999999988763 45899998875 12222222110 11112322211 0
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCc-eEEEE
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLK-CFTYI 172 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~-~~V~v 172 (543)
.+++..++++|+||++|+..+- .+...+....|+..++.+++.+.+. ... .+|.+
T Consensus 60 ------~d~~~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~ 116 (314)
T 1mld_A 60 ------EQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQH-CPDAMICII 116 (314)
T ss_dssp ------GGHHHHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTSEEEEC
T ss_pred ------CCHHHHhCCCCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEE
Confidence 2577788999999999987653 3333456899999999999999886 444 44443
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=1e-05 Score=81.47 Aligned_cols=120 Identities=15% Similarity=0.096 Sum_probs=75.0
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCE-----EEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEE
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKK-----IYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVIS 104 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~-----V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~ 104 (543)
.++|.||||+|++|++++..|+..+. +.+ |.++++.+.....+....++.+. . .+-...+.
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~~-~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~------------~-~~~~~~~~ 68 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGSV-FGKDQPIILVLLDITPMMGVLDGVLMELQDC------------A-LPLLKDVI 68 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTT-TCTTCCEEEEEECCGGGHHHHHHHHHHHHHT------------C-CTTEEEEE
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCC-ccccCCCEEEEEeCCCccccchhhHhhhHhh------------h-hcccCCEE
Confidence 36899999999999999999987642 223 77777753110011111122110 0 01111111
Q ss_pred ccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCc--eEEEEec
Q psy7538 105 GDITQLKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLK--CFTYIST 174 (543)
Q Consensus 105 gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~--~~V~vST 174 (543)
+ .. +....++++|+|||+||..+- .++..+.++.|+..++++++.+++. +.+ .++.+|-
T Consensus 69 ~--~~--------~~~~~~~daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~-~~~~~~vivvsN 130 (333)
T 5mdh_A 69 A--TD--------KEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKY-AKKSVKVIVVGN 130 (333)
T ss_dssp E--ES--------CHHHHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHH-SCTTCEEEECSS
T ss_pred E--cC--------CcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEEcCC
Confidence 1 11 245567899999999987643 3445567899999999999999997 554 3555553
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.82 E-value=0.00017 Score=62.34 Aligned_cols=99 Identities=20% Similarity=0.197 Sum_probs=63.8
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
++|+|+|+|+ |++|+.+++.|.+.|+ +|.++.|++ ++++.+ ... .++..+.+|.+
T Consensus 3 ~~m~i~IiG~-G~iG~~~a~~L~~~g~---~v~~~d~~~------~~~~~~---------~~~------~~~~~~~~d~~ 57 (140)
T 1lss_A 3 HGMYIIIAGI-GRVGYTLAKSLSEKGH---DIVLIDIDK------DICKKA---------SAE------IDALVINGDCT 57 (140)
T ss_dssp --CEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHH---------HHH------CSSEEEESCTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC---eEEEEECCH------HHHHHH---------HHh------cCcEEEEcCCC
Confidence 3589999986 9999999999999886 788888753 222221 111 13556788887
Q ss_pred CCCCCCCHHHHHHH-hcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEe
Q psy7538 109 QLKLGISEIDKKEL-IDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIS 173 (543)
Q Consensus 109 ~~~lgls~~~~~~l-~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vS 173 (543)
+++ .+... ++++|+||++.... ..| ..+.+.+++. +..++|..+
T Consensus 58 ~~~------~l~~~~~~~~d~vi~~~~~~----------~~~----~~~~~~~~~~-~~~~ii~~~ 102 (140)
T 1lss_A 58 KIK------TLEDAGIEDADMYIAVTGKE----------EVN----LMSSLLAKSY-GINKTIARI 102 (140)
T ss_dssp SHH------HHHHTTTTTCSEEEECCSCH----------HHH----HHHHHHHHHT-TCCCEEEEC
T ss_pred CHH------HHHHcCcccCCEEEEeeCCc----------hHH----HHHHHHHHHc-CCCEEEEEe
Confidence 653 44433 57899999996431 122 2455677776 556666433
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.79 E-value=5.6e-05 Score=79.73 Aligned_cols=113 Identities=17% Similarity=0.266 Sum_probs=70.6
Q ss_pred hhhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEE
Q psy7538 23 RIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQV 102 (543)
Q Consensus 23 ~i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~ 102 (543)
.|..-+++++|+|+|| |++|+.+++.|++.+ +. +|++..|.. ++.+++.+ . .++..
T Consensus 16 ~~~~~l~~k~VlIiGA-GgiG~aia~~L~~~~-g~-~V~v~~R~~------~ka~~la~------------~---~~~~~ 71 (467)
T 2axq_A 16 HIEGRHMGKNVLLLGS-GFVAQPVIDTLAAND-DI-NVTVACRTL------ANAQALAK------------P---SGSKA 71 (467)
T ss_dssp -------CEEEEEECC-STTHHHHHHHHHTST-TE-EEEEEESSH------HHHHHHHG------------G---GTCEE
T ss_pred ccccCCCCCEEEEECC-hHHHHHHHHHHHhCC-CC-eEEEEECCH------HHHHHHHH------------h---cCCcE
Confidence 3555677899999997 999999999999983 23 799999964 33333211 1 23566
Q ss_pred EEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHH-------H--HHHHHHHHHHHHhccCC
Q psy7538 103 ISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVIL-------N--TRGTRDMLELSKQMKNL 166 (543)
Q Consensus 103 i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~-------N--v~gt~~ll~~a~~~~~l 166 (543)
+.+|+.+.+ ++..+++++|+|||+++......-...+++. + ...+..+++.|++. ++
T Consensus 72 ~~~D~~d~~------~l~~~l~~~DvVIn~tp~~~~~~v~~a~l~~g~~vvd~~~~~p~~~~Ll~~Ak~a-Gv 137 (467)
T 2axq_A 72 ISLDVTDDS------ALDKVLADNDVVISLIPYTFHPNVVKSAIRTKTDVVTSSYISPALRELEPEIVKA-GI 137 (467)
T ss_dssp EECCTTCHH------HHHHHHHTSSEEEECSCGGGHHHHHHHHHHHTCEEEECSCCCHHHHHHHHHHHHH-TC
T ss_pred EEEecCCHH------HHHHHHcCCCEEEECCchhhhHHHHHHHHhcCCEEEEeecCCHHHHHHHHHHHHc-CC
Confidence 778887654 6888888999999998864211101112221 1 13457777888876 54
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=97.66 E-value=8.4e-05 Score=70.21 Aligned_cols=37 Identities=19% Similarity=0.319 Sum_probs=33.0
Q ss_pred cCCCEEEEEcC----------------cchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGG----------------SGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGa----------------tGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
++||+|+|||| ||.+|.++++.|.+.|. +|.++.|+.
T Consensus 6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga---~V~l~~~~~ 58 (226)
T 1u7z_A 6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGA---NVTLVSGPV 58 (226)
T ss_dssp TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTC---EEEEEECSC
T ss_pred CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCC---EEEEEECCc
Confidence 58999999999 79999999999999997 777777765
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.62 E-value=0.0005 Score=59.75 Aligned_cols=74 Identities=16% Similarity=0.201 Sum_probs=54.2
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
.+++|+|+|+ |.+|+.+++.|.+.|+ +|.++.|.+ ++++.+. ...+.++.||.+
T Consensus 5 ~~~~v~I~G~-G~iG~~la~~L~~~g~---~V~~id~~~------~~~~~~~----------------~~~~~~~~gd~~ 58 (141)
T 3llv_A 5 GRYEYIVIGS-EAAGVGLVRELTAAGK---KVLAVDKSK------EKIELLE----------------DEGFDAVIADPT 58 (141)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTC---CEEEEESCH------HHHHHHH----------------HTTCEEEECCTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCC---eEEEEECCH------HHHHHHH----------------HCCCcEEECCCC
Confidence 4678999997 9999999999999987 677888753 3333221 124678899999
Q ss_pred CCCCCCCHHHHHHH-hcCccEEEEcCc
Q psy7538 109 QLKLGISEIDKKEL-IDNVDIVYHVAA 134 (543)
Q Consensus 109 ~~~lgls~~~~~~l-~~~vd~ViH~AA 134 (543)
+++ .++.+ ++++|+||.+.+
T Consensus 59 ~~~------~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 59 DES------FYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp CHH------HHHHSCCTTCSEEEECCS
T ss_pred CHH------HHHhCCcccCCEEEEecC
Confidence 875 45554 467999998765
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=97.57 E-value=8.7e-05 Score=76.99 Aligned_cols=98 Identities=20% Similarity=0.310 Sum_probs=68.8
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCc-CEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNV-KKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v-~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
++|+|+|| |++|+.+++.|++.| ++ ..|.+..|+. ++.+++. +.+.. ....++..+.+|+++
T Consensus 2 ~kVlIiGa-GgiG~~ia~~L~~~g-~~~~~V~v~~r~~------~~~~~la-----~~l~~----~~~~~~~~~~~D~~d 64 (405)
T 4ina_A 2 AKVLQIGA-GGVGGVVAHKMAMNR-EVFSHITLASRTL------SKCQEIA-----QSIKA----KGYGEIDITTVDADS 64 (405)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTCT-TTCCEEEEEESCH------HHHHHHH-----HHHHH----TTCCCCEEEECCTTC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC-CCceEEEEEECCH------HHHHHHH-----HHhhh----hcCCceEEEEecCCC
Confidence 68999998 999999999999986 33 4888988864 2333221 11111 111357889999997
Q ss_pred CCCCCCHHHHHHHhcC--ccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCc
Q psy7538 110 LKLGISEIDKKELIDN--VDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLK 167 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~--vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~ 167 (543)
++ ++++++++ +|+|||+|+... . ..++++|.+. ++.
T Consensus 65 ~~------~l~~~l~~~~~DvVin~ag~~~---~------------~~v~~a~l~~-g~~ 102 (405)
T 4ina_A 65 IE------ELVALINEVKPQIVLNIALPYQ---D------------LTIMEACLRT-GVP 102 (405)
T ss_dssp HH------HHHHHHHHHCCSEEEECSCGGG---H------------HHHHHHHHHH-TCC
T ss_pred HH------HHHHHHHhhCCCEEEECCCccc---C------------hHHHHHHHHh-CCC
Confidence 65 78888887 999999997521 1 3577888887 543
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00013 Score=73.68 Aligned_cols=112 Identities=13% Similarity=0.146 Sum_probs=74.5
Q ss_pred hhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHH----HHhcCchhHHHHhhcCcCCCCce
Q psy7538 25 AKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVE----ELFESPVFDALKTLRGKSILQKI 100 (543)
Q Consensus 25 ~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~----~~~~~~~f~~l~~~~~~~~~~~v 100 (543)
.+|+++++|.|+||+|++|+.++..|+..|. ..+|.++++.. ++++ ++.+.. | + ..++
T Consensus 3 ~~~~~~~KV~ViGaaG~VG~~~a~~l~~~g~-~~evvLiDi~~------~k~~g~a~DL~~~~-~--------~--~~~i 64 (343)
T 3fi9_A 3 LSYLTEEKLTIVGAAGMIGSNMAQTAAMMRL-TPNLCLYDPFA------VGLEGVAEEIRHCG-F--------E--GLNL 64 (343)
T ss_dssp CCCSCSSEEEEETTTSHHHHHHHHHHHHTTC-CSCEEEECSCH------HHHHHHHHHHHHHC-C--------T--TCCC
T ss_pred ccccCCCEEEEECCCChHHHHHHHHHHhcCC-CCEEEEEeCCc------hhHHHHHHhhhhCc-C--------C--CCce
Confidence 3689999999999999999999999998873 23688877643 2222 121110 1 1 0122
Q ss_pred EEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCce
Q psy7538 101 QVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKC 168 (543)
Q Consensus 101 ~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~ 168 (543)
.+ . .+....++++|+||++||..+- .+...+.++.|+...+.+.+.+.+. ....
T Consensus 65 ~~-t------------~d~~~al~dADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~-~p~a 119 (343)
T 3fi9_A 65 TF-T------------SDIKEALTDAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSY-CPDC 119 (343)
T ss_dssp EE-E------------SCHHHHHTTEEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHH-CTTC
T ss_pred EE-c------------CCHHHHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-ccCc
Confidence 21 1 1466678899999999997643 3445667899999999999999886 4444
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=97.55 E-value=0.0011 Score=67.27 Aligned_cols=96 Identities=17% Similarity=0.103 Sum_probs=60.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHH-hhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKIL-RLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll-~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
..+|++|||||+.-+|.+....|. +.|. .+.++.|.+........-..+.+...|...- .....+...+.+|
T Consensus 48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA---~vi~v~~~~~~~~~~~atag~~~~~a~~~~i----~~~G~~a~~i~~D 120 (401)
T 4ggo_A 48 KAPKNVLVLGCSNGYGLASRITAAFGYGA---ATIGVSFEKAGSETKYGTPGWYNNLAFDEAA----KREGLYSVTIDGD 120 (401)
T ss_dssp CCCCEEEEESCSSHHHHHHHHHHHHHHCC---EEEEEECCCCCCSSSCCCHHHHHHHHHHHHH----HHHTCCEEEEESC
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhhCCC---CEEEEecCCcccccccccccchhHHHHHHHH----HHcCCCceeEeCC
Confidence 457999999999999999998887 6664 6777777654321100000000000111111 1123567899999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CccEEEEcCccC
Q psy7538 107 ITQLKLGISEIDKKELID-------NVDIVYHVAATI 136 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v 136 (543)
+++++ ..+++++ ++|+++|++|..
T Consensus 121 v~d~e------~i~~vi~~i~~~~G~IDiLVhS~A~~ 151 (401)
T 4ggo_A 121 AFSDE------IKAQVIEEAKKKGIKFDLIVYSLASP 151 (401)
T ss_dssp TTSHH------HHHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred CCCHH------HHHHHHHHHHHhcCCCCEEEEecccc
Confidence 99875 5665553 589999999964
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.54 E-value=9.6e-05 Score=75.55 Aligned_cols=87 Identities=10% Similarity=0.209 Sum_probs=63.4
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
+.|+|+|.|| |++|+.+++.|.+. + +|.+.+|.. ++++.+ .+.+..+..|+.
T Consensus 15 ~~mkilvlGa-G~vG~~~~~~L~~~-~---~v~~~~~~~------~~~~~~-----------------~~~~~~~~~d~~ 66 (365)
T 3abi_A 15 RHMKVLILGA-GNIGRAIAWDLKDE-F---DVYIGDVNN------ENLEKV-----------------KEFATPLKVDAS 66 (365)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHTTT-S---EEEEEESCH------HHHHHH-----------------TTTSEEEECCTT
T ss_pred CccEEEEECC-CHHHHHHHHHHhcC-C---CeEEEEcCH------HHHHHH-----------------hccCCcEEEecC
Confidence 4578999998 99999999988765 4 677777753 333322 134567788988
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhcc
Q psy7538 109 QLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMK 164 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~ 164 (543)
+.+ ++..+++++|+||+++... + ...++++|.+.+
T Consensus 67 d~~------~l~~~~~~~DvVi~~~p~~-----~----------~~~v~~~~~~~g 101 (365)
T 3abi_A 67 NFD------KLVEVMKEFELVIGALPGF-----L----------GFKSIKAAIKSK 101 (365)
T ss_dssp CHH------HHHHHHTTCSEEEECCCGG-----G----------HHHHHHHHHHHT
T ss_pred CHH------HHHHHHhCCCEEEEecCCc-----c----------cchHHHHHHhcC
Confidence 765 8999999999999998642 1 135788999873
|
| >1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* | Back alignment and structure |
|---|
Probab=97.42 E-value=5.5e-05 Score=74.01 Aligned_cols=36 Identities=31% Similarity=0.488 Sum_probs=27.2
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEE-EEecC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIY-LLMRT 66 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~-~l~R~ 66 (543)
+.++|.|+|+||.+|+.+++.+.+. +++ +|. ++.|+
T Consensus 4 ~~mkV~V~Ga~G~mG~~~~~~~~~~-~~~-elva~~d~~ 40 (273)
T 1dih_A 4 ANIRVAIAGAGGRMGRQLIQAALAL-EGV-QLGAALERE 40 (273)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHS-TTE-ECCCEECCT
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhC-CCC-EEEEEEecC
Confidence 4579999999999999999998865 444 555 34443
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00096 Score=59.06 Aligned_cols=106 Identities=16% Similarity=0.163 Sum_probs=65.6
Q ss_pred hhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEE
Q psy7538 24 IAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVI 103 (543)
Q Consensus 24 i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i 103 (543)
+++...+++|+|.|+ |.+|..+++.|.+.|. +|.++.|+... ++.+ . ...++..+
T Consensus 13 ~~~~~~~~~v~IiG~-G~iG~~la~~L~~~g~---~V~vid~~~~~------~~~~--------------~-~~~g~~~~ 67 (155)
T 2g1u_A 13 MSKKQKSKYIVIFGC-GRLGSLIANLASSSGH---SVVVVDKNEYA------FHRL--------------N-SEFSGFTV 67 (155)
T ss_dssp ----CCCCEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESCGGG------GGGS--------------C-TTCCSEEE
T ss_pred hhcccCCCcEEEECC-CHHHHHHHHHHHhCCC---eEEEEECCHHH------HHHH--------------H-hcCCCcEE
Confidence 445567899999995 9999999999999886 78888886532 1000 0 01245677
Q ss_pred EccCCCCCCCCCHHHHHHH-hcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEec
Q psy7538 104 SGDITQLKLGISEIDKKEL-IDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIST 174 (543)
Q Consensus 104 ~gDl~~~~lgls~~~~~~l-~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 174 (543)
.+|.++++ .+... ++++|+||.+.+.. ..| ..+.+.++...+..++|..++
T Consensus 68 ~~d~~~~~------~l~~~~~~~ad~Vi~~~~~~----------~~~----~~~~~~~~~~~~~~~iv~~~~ 119 (155)
T 2g1u_A 68 VGDAAEFE------TLKECGMEKADMVFAFTNDD----------STN----FFISMNARYMFNVENVIARVY 119 (155)
T ss_dssp ESCTTSHH------HHHTTTGGGCSEEEECSSCH----------HHH----HHHHHHHHHTSCCSEEEEECS
T ss_pred EecCCCHH------HHHHcCcccCCEEEEEeCCc----------HHH----HHHHHHHHHHCCCCeEEEEEC
Confidence 78876543 45544 57899999887531 111 335556776334455554444
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00046 Score=60.99 Aligned_cols=78 Identities=14% Similarity=0.231 Sum_probs=55.6
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
..++|+|+|+ |.+|+.+++.|.+.|+ +|.++.|.. .++.+.+ ... ...++.++.||.+
T Consensus 2 ~~~~vlI~G~-G~vG~~la~~L~~~g~---~V~vid~~~-----~~~~~~~---------~~~----~~~~~~~i~gd~~ 59 (153)
T 1id1_A 2 RKDHFIVCGH-SILAINTILQLNQRGQ---NVTVISNLP-----EDDIKQL---------EQR----LGDNADVIPGDSN 59 (153)
T ss_dssp CCSCEEEECC-SHHHHHHHHHHHHTTC---CEEEEECCC-----HHHHHHH---------HHH----HCTTCEEEESCTT
T ss_pred CCCcEEEECC-CHHHHHHHHHHHHCCC---CEEEEECCC-----hHHHHHH---------HHh----hcCCCeEEEcCCC
Confidence 4678999995 9999999999999986 677888753 1222111 100 1135788999998
Q ss_pred CCCCCCCHHHHHHH-hcCccEEEEcCc
Q psy7538 109 QLKLGISEIDKKEL-IDNVDIVYHVAA 134 (543)
Q Consensus 109 ~~~lgls~~~~~~l-~~~vd~ViH~AA 134 (543)
+++ .+..+ ++++|+|+-+..
T Consensus 60 ~~~------~l~~a~i~~ad~vi~~~~ 80 (153)
T 1id1_A 60 DSS------VLKKAGIDRCRAILALSD 80 (153)
T ss_dssp SHH------HHHHHTTTTCSEEEECSS
T ss_pred CHH------HHHHcChhhCCEEEEecC
Confidence 765 56665 789999997654
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0051 Score=55.81 Aligned_cols=75 Identities=15% Similarity=0.162 Sum_probs=54.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhh-CCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRL-EPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~-g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
..+++|+|.| .|.+|..+++.|.+. |+ +|.++.|.+ ++++.+ + ..++..+.||
T Consensus 37 ~~~~~v~IiG-~G~~G~~~a~~L~~~~g~---~V~vid~~~------~~~~~~---------~-------~~g~~~~~gd 90 (183)
T 3c85_A 37 PGHAQVLILG-MGRIGTGAYDELRARYGK---ISLGIEIRE------EAAQQH---------R-------SEGRNVISGD 90 (183)
T ss_dssp CTTCSEEEEC-CSHHHHHHHHHHHHHHCS---CEEEEESCH------HHHHHH---------H-------HTTCCEEECC
T ss_pred CCCCcEEEEC-CCHHHHHHHHHHHhccCC---eEEEEECCH------HHHHHH---------H-------HCCCCEEEcC
Confidence 3567899998 599999999999998 87 677888764 333222 1 0245678899
Q ss_pred CCCCCCCCCHHHHHHH--hcCccEEEEcCc
Q psy7538 107 ITQLKLGISEIDKKEL--IDNVDIVYHVAA 134 (543)
Q Consensus 107 l~~~~lgls~~~~~~l--~~~vd~ViH~AA 134 (543)
.++++ .+..+ ++++|+||.+..
T Consensus 91 ~~~~~------~l~~~~~~~~ad~vi~~~~ 114 (183)
T 3c85_A 91 ATDPD------FWERILDTGHVKLVLLAMP 114 (183)
T ss_dssp TTCHH------HHHTBCSCCCCCEEEECCS
T ss_pred CCCHH------HHHhccCCCCCCEEEEeCC
Confidence 88754 46665 678999998764
|
| >3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A* | Back alignment and structure |
|---|
Probab=96.81 E-value=0.027 Score=55.85 Aligned_cols=117 Identities=16% Similarity=0.124 Sum_probs=75.6
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|.|+||+|.+|..++..|....+-+.+|.++++.++ ......++.+. + ...++..+.+ ++
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~---~~G~a~Dl~~~-----------~-~~~~v~~~~~--~~- 62 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPV---TPGVAVDLSHI-----------P-TAVKIKGFSG--ED- 62 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTT---HHHHHHHHHTS-----------C-SSEEEEEECS--SC-
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCC---chhHHHHhhCC-----------C-CCceEEEecC--CC-
Confidence 68999999999999999888776223358888888752 12212222111 1 1112222222 11
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEec
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIST 174 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 174 (543)
....++++|+||-+|+..+- .+...+.++.|+.-.+.+.+.+.+. ....++.+-|
T Consensus 63 --------~~~~~~~aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~-~p~a~vlvvt 118 (312)
T 3hhp_A 63 --------ATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKT-CPKACIGIIT 118 (312)
T ss_dssp --------CHHHHTTCSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECS
T ss_pred --------cHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEec
Confidence 23456899999999997653 4556778999999999999998886 4454444433
|
| >1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1 | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0036 Score=61.90 Aligned_cols=52 Identities=19% Similarity=0.375 Sum_probs=37.7
Q ss_pred chhhccCcchhhhh-----cCCCE-EEEE-cCc-----------------chhHHHHHHHHHhhCCCcCEEEEEecCCC
Q psy7538 14 PKELQALPDRIAKT-----YENKS-IFLS-GGS-----------------GFLGKVLIEKILRLEPNVKKIYLLMRTKK 68 (543)
Q Consensus 14 ~~~~~~~~~~i~~~-----~~~~~-VlIT-Gat-----------------GFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~ 68 (543)
|.++..+...+.+| ++|++ |||| ||| |-+|.++++.+++.|+ .|.++.|+..
T Consensus 15 p~~~~~i~~~i~~~~~~~~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga---~V~lv~g~~s 90 (313)
T 1p9o_A 15 PPGAARWAEVMARFAARLGAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGY---GVLFLYRARS 90 (313)
T ss_dssp -----CHHHHHHHHHHHHHHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTC---EEEEEEETTS
T ss_pred cccHHHHHHHHHHHhhhhhhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCC---EEEEEecCCC
Confidence 44444444455555 57888 9999 667 9999999999999997 7888888764
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0077 Score=55.29 Aligned_cols=37 Identities=11% Similarity=0.249 Sum_probs=32.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
-.|++|+||||+|-+|..+++.+...|. +|++..|+.
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~---~V~~~~~~~ 73 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKMIGA---RIYTTAGSD 73 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHHTC---EEEEEESSH
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHHcCC---EEEEEeCCH
Confidence 4589999999999999999999998885 788888863
|
| >2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A | Back alignment and structure |
|---|
Probab=96.58 E-value=0.002 Score=65.09 Aligned_cols=172 Identities=13% Similarity=0.118 Sum_probs=90.1
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCC----CcCEEEEEecC-CCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEE
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEP----NVKKIYLLMRT-KKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVI 103 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~----~v~~V~~l~R~-~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i 103 (543)
+.++|+|.||||.+|+.|++.|++.++ ++ +|..+.+. ..++... + .. +.... .
T Consensus 8 ~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~-ei~~l~s~~~agk~~~----~------------~~-~~l~~-~--- 65 (352)
T 2nqt_A 8 NATKVAVAGASGYAGGEILRLLLGHPAYADGRL-RIGALTAATSAGSTLG----E------------HH-PHLTP-L--- 65 (352)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSE-EEEEEEESSCTTSBGG----G------------TC-TTCGG-G---
T ss_pred cCCEEEEECCCCHHHHHHHHHHHcCCCCCCccE-EEEEEECCCcCCCchh----h------------hc-ccccc-c---
Confidence 457999999999999999999997631 45 66666543 3332110 0 00 11100 0
Q ss_pred EccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCc
Q psy7538 104 SGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKV 183 (543)
Q Consensus 104 ~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~ 183 (543)
.|+...++ + .+. +.++|+||.|++... +..+++.+ +. + .++|-.|+++-..+. .
T Consensus 66 -~~~~~~~~--~---~~~-~~~~DvVf~alg~~~---------------s~~~~~~~-~~-G-~~vIDlSa~~R~~~~-~ 119 (352)
T 2nqt_A 66 -AHRVVEPT--E---AAV-LGGHDAVFLALPHGH---------------SAVLAQQL-SP-E-TLIIDCGADFRLTDA-A 119 (352)
T ss_dssp -TTCBCEEC--C---HHH-HTTCSEEEECCTTSC---------------CHHHHHHS-CT-T-SEEEECSSTTTCSCH-H
T ss_pred -ceeeeccC--C---HHH-hcCCCEEEECCCCcc---------------hHHHHHHH-hC-C-CEEEEECCCccCCcc-h
Confidence 12211111 1 122 458999999887532 23455666 55 5 478889988653221 1
Q ss_pred cccc----------ccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCc--EEEEec
Q psy7538 184 LEER----------TYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMP--CMILRP 251 (543)
Q Consensus 184 i~E~----------~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp--~~IlRp 251 (543)
+-|+ .|--|.=+. ..+.+. ...+=.-|+.|+-.=.++=.-+.+.. ++. +++-=-
T Consensus 120 ~~~~~y~~~h~~~~vyglPEv~~---------n~~~i~---~~~iIanPgC~tt~~~lal~PL~~~~--~i~~~i~v~t~ 185 (352)
T 2nqt_A 120 VWERFYGSSHAGSWPYGLPELPG---------ARDQLR---GTRRIAVPGCYPTAALLALFPALAAD--LIEPAVTVVAV 185 (352)
T ss_dssp HHHHHHSSCCCCCCCBSCTTSTT---------HHHHHT---TCSEEECCCHHHHHHHHHHHHHHHTT--CSCSEEEEEEE
T ss_pred hhhhhccccCCCCeeEEeccccc---------CHHHHh---cCCEEEcCCHHHHHHHHHHHHHHHcC--CCcceEEEEEE
Confidence 1111 222111000 111111 12233456889877776666665443 454 555556
Q ss_pred CeeeecCCCCC
Q psy7538 252 SIVVPIYKEPL 262 (543)
Q Consensus 252 s~V~G~~~~p~ 262 (543)
+.+-|+++.+.
T Consensus 186 ~g~SGaG~~~~ 196 (352)
T 2nqt_A 186 SGTSGAGRAAT 196 (352)
T ss_dssp ECGGGGCSSCC
T ss_pred eccccCCcccc
Confidence 66777766553
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.37 E-value=0.0057 Score=57.30 Aligned_cols=72 Identities=17% Similarity=0.266 Sum_probs=52.5
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|+|+|+ |.+|+.+++.|.+.|+ .|.++.|.+ ++++++. . ..++.++.||.+++
T Consensus 1 M~iiIiG~-G~~G~~la~~L~~~g~---~v~vid~~~------~~~~~l~---------~------~~~~~~i~gd~~~~ 55 (218)
T 3l4b_C 1 MKVIIIGG-ETTAYYLARSMLSRKY---GVVIINKDR------ELCEEFA---------K------KLKATIIHGDGSHK 55 (218)
T ss_dssp CCEEEECC-HHHHHHHHHHHHHTTC---CEEEEESCH------HHHHHHH---------H------HSSSEEEESCTTSH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC---eEEEEECCH------HHHHHHH---------H------HcCCeEEEcCCCCH
Confidence 67999996 9999999999999987 677777753 3333221 0 02467899999986
Q ss_pred CCCCCHHHHHHH-hcCccEEEEcC
Q psy7538 111 KLGISEIDKKEL-IDNVDIVYHVA 133 (543)
Q Consensus 111 ~lgls~~~~~~l-~~~vd~ViH~A 133 (543)
+ .+..+ ++++|+||-+.
T Consensus 56 ~------~l~~a~i~~ad~vi~~~ 73 (218)
T 3l4b_C 56 E------ILRDAEVSKNDVVVILT 73 (218)
T ss_dssp H------HHHHHTCCTTCEEEECC
T ss_pred H------HHHhcCcccCCEEEEec
Confidence 5 56655 67899999554
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=96.34 E-value=0.028 Score=56.06 Aligned_cols=113 Identities=12% Similarity=0.153 Sum_probs=65.3
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHH----HHhcCchhHHHHhhcCcCCCCceEEEE
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVE----ELFESPVFDALKTLRGKSILQKIQVIS 104 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~----~~~~~~~f~~l~~~~~~~~~~~v~~i~ 104 (543)
++++|.|+|+ |.+|..++..|+..+. +.+|.++++.. ++++ ++-+.. + ....+....
T Consensus 8 ~~~kV~ViGa-G~vG~~~a~~l~~~~~-~~el~l~D~~~------~k~~g~a~DL~~~~----------~-~~~~~~i~~ 68 (326)
T 3vku_A 8 DHQKVILVGD-GAVGSSYAYAMVLQGI-AQEIGIVDIFK------DKTKGDAIDLEDAL----------P-FTSPKKIYS 68 (326)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSCH------HHHHHHHHHHHTTG----------G-GSCCCEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEeCCh------HHHHHHHhhHhhhh----------h-hcCCcEEEE
Confidence 4679999996 9999999999998863 45888888742 2332 221110 1 112344443
Q ss_pred ccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEec
Q psy7538 105 GDITQLKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIST 174 (543)
Q Consensus 105 gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 174 (543)
+|. ..++++|+||++|+..+- .+...+.++.|+.-.+.+.+.+.+. ....++.+-|
T Consensus 69 ~~~-------------~a~~~aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~-~p~a~ilvvt 125 (326)
T 3vku_A 69 AEY-------------SDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDS-GFNGIFLVAA 125 (326)
T ss_dssp CCG-------------GGGTTCSEEEECCCCC----------------CHHHHHHHHHTT-TCCSEEEECS
T ss_pred CcH-------------HHhcCCCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEcc
Confidence 321 246899999999997543 2344567888999999999999886 4455554444
|
| >2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=96.32 E-value=0.0083 Score=60.38 Aligned_cols=34 Identities=18% Similarity=0.342 Sum_probs=27.5
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEe
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLM 64 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~ 64 (543)
++|+|.||||.+|+.+++.|+++++...+|..+.
T Consensus 7 ~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~ 40 (340)
T 2hjs_A 7 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLA 40 (340)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEE
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEe
Confidence 6899999999999999999987665444666554
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=96.32 E-value=0.092 Score=52.33 Aligned_cols=114 Identities=16% Similarity=0.157 Sum_probs=76.2
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHH----HhcCchhHHHHhhcCcCCCCceEEEE
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEE----LFESPVFDALKTLRGKSILQKIQVIS 104 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~----~~~~~~f~~l~~~~~~~~~~~v~~i~ 104 (543)
+.++|.|+|+ |.+|..++..|+..|. +.+|.++++.. ++++. +.+. . +.....+....
T Consensus 4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~-~~~l~l~D~~~------~k~~g~a~DL~~~---------~-~~~~~~v~i~~ 65 (326)
T 3pqe_A 4 HVNKVALIGA-GFVGSSYAFALINQGI-TDELVVIDVNK------EKAMGDVMDLNHG---------K-AFAPQPVKTSY 65 (326)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSCH------HHHHHHHHHHHHT---------G-GGSSSCCEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC-CceEEEEecch------HHHHHHHHHHHhc---------c-ccccCCeEEEe
Confidence 3579999996 9999999999998863 35888888742 23221 2111 0 21112344443
Q ss_pred ccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEec
Q psy7538 105 GDITQLKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIST 174 (543)
Q Consensus 105 gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 174 (543)
+|. ..++++|+||.+|+..+- .+...+.++.|+...+.+.+.+.+. ....++.+-|
T Consensus 66 ~~~-------------~a~~~aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~-~p~a~vlvvt 122 (326)
T 3pqe_A 66 GTY-------------EDCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMAS-GFDGIFLVAT 122 (326)
T ss_dssp ECG-------------GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEECS
T ss_pred CcH-------------HHhCCCCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHh-cCCeEEEEcC
Confidence 331 246799999999997643 3445677899999999999999886 4455554444
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=96.11 E-value=0.0054 Score=57.04 Aligned_cols=34 Identities=32% Similarity=0.415 Sum_probs=30.3
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
|+|+|+||+|++|+.+++.|++.|+ +|++..|+.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~---~V~~~~r~~ 34 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGH---EIVVGSRRE 34 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTC---EEEEEESSH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 5799999999999999999999986 788888864
|
| >1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A | Back alignment and structure |
|---|
Probab=95.99 E-value=0.01 Score=60.26 Aligned_cols=183 Identities=16% Similarity=0.161 Sum_probs=92.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC-CCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK-KGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~-~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
++.++|+|.||||.+|+.+++.|.+. +++ +|..+.+.. .+. ++.+.. +.....+ ..|
T Consensus 14 M~~~kV~IiGAtG~iG~~llr~L~~~-p~~-elvai~~~~~~g~----~~~~~~-------------~~~~~~v---~~d 71 (359)
T 1xyg_A 14 EKDIRIGLLGASGYTGAEIVRLLANH-PHF-QVTLMTADRKAGQ----SMESVF-------------PHLRAQK---LPT 71 (359)
T ss_dssp -CCEEEEEECCSSHHHHHHHHHHHTC-SSE-EEEEEBCSTTTTS----CHHHHC-------------GGGTTSC---CCC
T ss_pred ccCcEEEEECcCCHHHHHHHHHHHcC-CCc-EEEEEeCchhcCC----CHHHhC-------------chhcCcc---ccc
Confidence 45579999999999999999999887 666 566665543 222 222111 1111111 123
Q ss_pred CCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCcccc
Q psy7538 107 ITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEE 186 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i~E 186 (543)
+.-. + +..++++|+||-|++... +......+ +. +. ++|-.|+.+-..+. ..-|
T Consensus 72 l~~~-------~-~~~~~~vDvVf~atp~~~---------------s~~~a~~~-~a-G~-~VId~sa~~R~~~~-~~y~ 124 (359)
T 1xyg_A 72 LVSV-------K-DADFSTVDAVFCCLPHGT---------------TQEIIKEL-PT-AL-KIVDLSADFRLRNI-AEYE 124 (359)
T ss_dssp CBCG-------G-GCCGGGCSEEEECCCTTT---------------HHHHHHTS-CT-TC-EEEECSSTTTCSCH-HHHH
T ss_pred ceec-------c-hhHhcCCCEEEEcCCchh---------------HHHHHHHH-hC-CC-EEEECCccccCCch-hhhh
Confidence 3211 1 224468999999876422 13344555 54 54 57878877542210 1123
Q ss_pred cccCCCCChHHHHH-HHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCC---cEEEEecCeeeecCCCC
Q psy7538 187 RTYLPPDDPHQVIL-RAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGM---PCMILRPSIVVPIYKEP 261 (543)
Q Consensus 187 ~~y~~p~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~l---p~~IlRps~V~G~~~~p 261 (543)
..|..+....+++. .+--+.|-..+.+....+=.-|+.|+-.=.++=.-+.+.. ++ ++.+-=-+.+.|.++.+
T Consensus 125 ~~y~~~~~~~~~l~~~vygvpE~n~~~i~~~~iIanpgC~tt~~~~~l~pL~~~~--~i~~~~i~v~t~~~~SGaG~~~ 201 (359)
T 1xyg_A 125 EWYGQPHKAVELQKEVVYGLTEILREDIKKARLVANPGCYPTTIQLPLVPLLKAN--LIKHENIIIDAKSGVSGAGRGA 201 (359)
T ss_dssp HHHSSCCSCHHHHTTCEECCHHHHHHHHHTCSEEECCCHHHHHHHHHHHHHHHTT--CBCSSSCEEEEEEEGGGGCSCC
T ss_pred hhhcCCcCChhhcCCceEECCccCHHHhccCCEEECCCcHHHHHHHHHHHHHHcC--CCCCCeEEEEEEEEccccCccc
Confidence 33433333222222 0111111111122222233456888877777666665543 23 23444445566776654
|
| >1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=95.95 E-value=0.061 Score=53.47 Aligned_cols=117 Identities=11% Similarity=0.142 Sum_probs=72.9
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
.++|.|+|| |.+|..++-.|+..+. +.+|.++++....... ...++.+. ......+.+..+|
T Consensus 7 ~~KI~IiGa-G~vG~~~a~~l~~~~~-~~ev~L~Di~~~~~~g--~~~dl~~~-----------~~~~~~~~i~~~~--- 68 (318)
T 1y6j_A 7 RSKVAIIGA-GFVGASAAFTMALRQT-ANELVLIDVFKEKAIG--EAMDINHG-----------LPFMGQMSLYAGD--- 68 (318)
T ss_dssp CCCEEEECC-SHHHHHHHHHHHHTTC-SSEEEEECCC---CCH--HHHHHTTS-----------CCCTTCEEEC--C---
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCChHHHHH--HHHHHHHh-----------HHhcCCeEEEECC---
Confidence 478999998 9999999999998864 5689999887543321 11122111 0011233322211
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecC
Q psy7538 110 LKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTA 175 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~ 175 (543)
...++++|+||.+|+..+- .....+....|+...+.+.+.+.+. ....+|.+.|-
T Consensus 69 ----------~~a~~~aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~tN 124 (318)
T 1y6j_A 69 ----------YSDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKY-YNHGVILVVSN 124 (318)
T ss_dssp ----------GGGGTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHH-CCSCEEEECSS
T ss_pred ----------HHHhCCCCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEEecC
Confidence 1246899999999987542 3344567788999999999999886 45666666553
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=95.93 E-value=0.013 Score=58.16 Aligned_cols=85 Identities=16% Similarity=0.099 Sum_probs=54.8
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
.+|++++|+|+ |-+|+.++..|.+.|. ++|++..|.++. .+|.+++.+ .+.... ...+.. .++
T Consensus 152 l~gk~~lVlGa-GG~g~aia~~L~~~Ga--~~V~i~nR~~~~---~~~a~~la~-----~~~~~~----~~~~~~--~~~ 214 (315)
T 3tnl_A 152 IIGKKMTICGA-GGAATAICIQAALDGV--KEISIFNRKDDF---YANAEKTVE-----KINSKT----DCKAQL--FDI 214 (315)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHTTC--SEEEEEECSSTT---HHHHHHHHH-----HHHHHS----SCEEEE--EET
T ss_pred ccCCEEEEECC-ChHHHHHHHHHHHCCC--CEEEEEECCCch---HHHHHHHHH-----Hhhhhc----CCceEE--ecc
Confidence 57899999997 8899999999999864 589999998432 233332211 111111 112333 344
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCcc
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAAT 135 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~ 135 (543)
.+. +++...+.++|+||++...
T Consensus 215 ~~~------~~l~~~l~~aDiIINaTp~ 236 (315)
T 3tnl_A 215 EDH------EQLRKEIAESVIFTNATGV 236 (315)
T ss_dssp TCH------HHHHHHHHTCSEEEECSST
T ss_pred chH------HHHHhhhcCCCEEEECccC
Confidence 432 3577778899999998653
|
| >4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=95.90 E-value=0.01 Score=57.75 Aligned_cols=39 Identities=33% Similarity=0.522 Sum_probs=30.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
++.++|.|.||+|.+|+.+++.+.+. +++.-|-+++|+.
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~~-~~~eLv~~~d~~~ 43 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLAA-PDATLVGALDRTG 43 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHHC-TTEEEEEEBCCTT
T ss_pred ccccEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEEecC
Confidence 34579999999999999999999876 6764444456654
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=95.89 E-value=0.025 Score=48.79 Aligned_cols=72 Identities=18% Similarity=0.275 Sum_probs=52.5
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
++|+|.|+ |.+|+.+++.|.+.|+ +|.++.+.+ ++++.+. ..++.++.||.+++
T Consensus 8 ~~viIiG~-G~~G~~la~~L~~~g~---~v~vid~~~------~~~~~~~----------------~~g~~~i~gd~~~~ 61 (140)
T 3fwz_A 8 NHALLVGY-GRVGSLLGEKLLASDI---PLVVIETSR------TRVDELR----------------ERGVRAVLGNAANE 61 (140)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHTTC---CEEEEESCH------HHHHHHH----------------HTTCEEEESCTTSH
T ss_pred CCEEEECc-CHHHHHHHHHHHHCCC---CEEEEECCH------HHHHHHH----------------HcCCCEEECCCCCH
Confidence 47999995 9999999999999987 678888864 3333221 13567899999987
Q ss_pred CCCCCHHHHHHH-hcCccEEEEcCc
Q psy7538 111 KLGISEIDKKEL-IDNVDIVYHVAA 134 (543)
Q Consensus 111 ~lgls~~~~~~l-~~~vd~ViH~AA 134 (543)
+ .++.+ ++++|+|+-+..
T Consensus 62 ~------~l~~a~i~~ad~vi~~~~ 80 (140)
T 3fwz_A 62 E------IMQLAHLECAKWLILTIP 80 (140)
T ss_dssp H------HHHHTTGGGCSEEEECCS
T ss_pred H------HHHhcCcccCCEEEEECC
Confidence 5 45543 567999986653
|
| >4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major} | Back alignment and structure |
|---|
Probab=95.84 E-value=0.1 Score=52.42 Aligned_cols=117 Identities=19% Similarity=0.165 Sum_probs=73.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCc-----CEEEEEecCCCCCCHHHHHH----HHhcCchhHHHHhhcCcCCCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNV-----KKIYLLMRTKKGKTPNQRVE----ELFESPVFDALKTLRGKSILQ 98 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v-----~~V~~l~R~~~~~~~~~rl~----~~~~~~~f~~l~~~~~~~~~~ 98 (543)
++.-+|.|+||+|.||+.|+-.|... +-+ ..+.+++.++. ...++ ++-. -....
T Consensus 22 ~~~vKVaViGAaG~IG~~la~~la~~-~l~~~~~~~eL~L~Di~~~----~~~~~Gva~DL~~------------~~~~~ 84 (345)
T 4h7p_A 22 MSAVKVAVTGAAGQIGYALVPLIARG-ALLGPTTPVELRLLDIEPA----LKALAGVEAELED------------CAFPL 84 (345)
T ss_dssp CCCEEEEEESTTSHHHHHHHHHHHHT-TTTCTTCCEEEEEECCGGG----HHHHHHHHHHHHH------------TTCTT
T ss_pred CCCCEEEEECcCcHHHHHHHHHHHhc-cccCCCCccEEEEECCCCc----cccchhhhhhhhh------------cCccC
Confidence 34469999999999999998766653 222 26777776542 11221 1111 01111
Q ss_pred ceEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEE
Q psy7538 99 KIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYI 172 (543)
Q Consensus 99 ~v~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~v 172 (543)
....+.++ +....++++|+||-+||..+- .+...+.++.|..-.+.+.+...+......+|.+
T Consensus 85 ~~~~~~~~-----------~~~~a~~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlv 148 (345)
T 4h7p_A 85 LDKVVVTA-----------DPRVAFDGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVV 148 (345)
T ss_dssp EEEEEEES-----------CHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CCcEEEcC-----------ChHHHhCCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEE
Confidence 12222221 245668999999999997653 4667789999999999999998774223344443
|
| >2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=95.71 E-value=0.011 Score=59.61 Aligned_cols=35 Identities=20% Similarity=0.423 Sum_probs=28.6
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRT 66 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~ 66 (543)
.++|.|.||||.+|+.+++.|.+. +++ +|..+.+.
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~-p~~-elv~v~s~ 38 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSH-PYL-EVKQVTSR 38 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTC-TTE-EEEEEBCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHcC-CCc-EEEEEECc
Confidence 468999999999999999999876 666 66666553
|
| >2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=95.71 E-value=0.045 Score=57.00 Aligned_cols=100 Identities=16% Similarity=0.226 Sum_probs=66.6
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCc--CEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNV--KKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v--~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
.++|+|.| .|-||+.++.+|.++ +++ .+|.+.+..+.+.+..+++ ++.+...++
T Consensus 13 ~~rVlIIG-aGgVG~~va~lla~~-~dv~~~~I~vaD~~~~~~~~~~~~----------------------g~~~~~~~V 68 (480)
T 2ph5_A 13 KNRFVILG-FGCVGQALMPLIFEK-FDIKPSQVTIIAAEGTKVDVAQQY----------------------GVSFKLQQI 68 (480)
T ss_dssp CSCEEEEC-CSHHHHHHHHHHHHH-BCCCGGGEEEEESSCCSCCHHHHH----------------------TCEEEECCC
T ss_pred CCCEEEEC-cCHHHHHHHHHHHhC-CCCceeEEEEeccchhhhhHHhhc----------------------CCceeEEec
Confidence 35799999 799999999999998 454 4788887766554332211 345666677
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecC
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTA 175 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~ 175 (543)
+..+. .+.+..++++.|+|+|++-.. . ...++++|.+. ++ -|++|+
T Consensus 69 dadnv---~~~l~aLl~~~DvVIN~s~~~---~------------~l~Im~aclea-Gv---~YlDTa 114 (480)
T 2ph5_A 69 TPQNY---LEVIGSTLEENDFLIDVSIGI---S------------SLALIILCNQK-GA---LYINAA 114 (480)
T ss_dssp CTTTH---HHHTGGGCCTTCEEEECCSSS---C------------HHHHHHHHHHH-TC---EEEESS
T ss_pred cchhH---HHHHHHHhcCCCEEEECCccc---c------------CHHHHHHHHHc-CC---CEEECC
Confidence 66531 122445666679999965322 1 14588999998 43 577777
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=95.70 E-value=0.015 Score=59.26 Aligned_cols=77 Identities=14% Similarity=0.198 Sum_probs=53.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
.++++|+|+|+ |-+|+.+++.|...|. +|.+..|+. +|++.+. +. .... +.+|.
T Consensus 164 l~~~~V~ViGa-G~iG~~~a~~l~~~Ga---~V~~~d~~~------~~~~~~~---------~~----~g~~---~~~~~ 217 (369)
T 2eez_A 164 VAPASVVILGG-GTVGTNAAKIALGMGA---QVTILDVNH------KRLQYLD---------DV----FGGR---VITLT 217 (369)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH---------HH----TTTS---EEEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCC---EEEEEECCH------HHHHHHH---------Hh----cCce---EEEec
Confidence 56799999998 9999999999999986 788888864 2332211 00 0111 23454
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCccC
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAATI 136 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~v 136 (543)
.+. +++.++++++|+||++++..
T Consensus 218 ~~~------~~l~~~~~~~DvVi~~~g~~ 240 (369)
T 2eez_A 218 ATE------ANIKKSVQHADLLIGAVLVP 240 (369)
T ss_dssp CCH------HHHHHHHHHCSEEEECCC--
T ss_pred CCH------HHHHHHHhCCCEEEECCCCC
Confidence 443 37888888999999998753
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=95.68 E-value=0.014 Score=58.67 Aligned_cols=37 Identities=14% Similarity=0.205 Sum_probs=32.4
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
-.|++|+|+||+|-+|..+++.+...|. +|++..|+.
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga---~V~~~~~~~ 204 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKAMGY---RVLGIDGGE 204 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECST
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---cEEEEcCCH
Confidence 4589999999999999999999888875 788888865
|
| >3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A | Back alignment and structure |
|---|
Probab=95.65 E-value=0.06 Score=53.89 Aligned_cols=35 Identities=26% Similarity=0.446 Sum_probs=28.0
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRT 66 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~ 66 (543)
+++|+|.||||.+|+.|++.|.+. |++ ++..+.++
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~-p~~-el~~l~s~ 38 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRH-PHM-NITALTVS 38 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHC-TTE-EEEEEEEE
T ss_pred ceEEEEECCCChHHHHHHHHHHhC-CCC-cEEEEEec
Confidence 368999999999999999988875 777 56555443
|
| >2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A* | Back alignment and structure |
|---|
Probab=95.64 E-value=0.17 Score=49.51 Aligned_cols=116 Identities=15% Similarity=0.085 Sum_probs=75.5
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEE-ccCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVIS-GDITQ 109 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~-gDl~~ 109 (543)
|+|.|+|| |.+|+.++-.|+.++ -+.++.+++..+.. ++.--.++.+.. +........+. +|.
T Consensus 1 MKV~IiGa-G~VG~~~a~~l~~~~-~~~el~L~Di~~~~--~~G~a~DL~h~~----------~~~~~~~~i~~~~d~-- 64 (294)
T 2x0j_A 1 MKLGFVGA-GRVGSTSAFTCLLNL-DVDEIALVDIAEDL--AVGEAMDLAHAA----------AGIDKYPKIVGGADY-- 64 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHS-CCSEEEEECSSHHH--HHHHHHHHHHHH----------GGGTCCCEEEEESCG--
T ss_pred CEEEEECc-CHHHHHHHHHHHhCC-CCCEEEEEeCCCCc--chhhhhhhhccc----------ccCCCCCeEecCCCH--
Confidence 68999995 999999999998884 56789888875311 111111221110 11111222222 222
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEec
Q psy7538 110 LKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIST 174 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 174 (543)
+.++++|+|+-+||..+- .+...+.++.|..-.+.+.+.+.+. ..+.++.+=|
T Consensus 65 -----------~~~~~aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~-~p~aivlvvs 118 (294)
T 2x0j_A 65 -----------SLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKILVVT 118 (294)
T ss_dssp -----------GGGTTCSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEECS
T ss_pred -----------HHhCCCCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhc-CCceEEEEec
Confidence 135799999999997653 4667788999999999999999887 5566655544
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=95.63 E-value=0.033 Score=55.62 Aligned_cols=37 Identities=14% Similarity=0.122 Sum_probs=32.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
-.|++|+||||+|-+|..+++.+...|. +|++..|+.
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~---~V~~~~~~~ 180 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKGC---KVVGAAGSD 180 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTTC---EEEEEESSH
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 3579999999999999999999998875 788888753
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=95.62 E-value=0.024 Score=54.39 Aligned_cols=118 Identities=14% Similarity=0.104 Sum_probs=70.6
Q ss_pred hhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHH-------------HHHHHHhcCchhHHHHh
Q psy7538 24 IAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPN-------------QRVEELFESPVFDALKT 90 (543)
Q Consensus 24 i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~-------------~rl~~~~~~~~f~~l~~ 90 (543)
-++-+++++|+|.|+ |-+|+.+++.|.+.|. .+|.++++..-..+-. .|.+. +-++++.
T Consensus 25 ~q~~l~~~~VlVvG~-Gg~G~~va~~La~~Gv--~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~-----~~~~l~~ 96 (249)
T 1jw9_B 25 GQEALKDSRVLIVGL-GGLGCAASQYLASAGV--GNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVES-----ARDALTR 96 (249)
T ss_dssp HHHHHHHCEEEEECC-SHHHHHHHHHHHHHTC--SEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHH-----HHHHHHH
T ss_pred HHHHHhCCeEEEEee-CHHHHHHHHHHHHcCC--CeEEEEcCCCcccccCCcccccChhhcCcHHHHH-----HHHHHHH
Confidence 445577899999995 7899999999999964 6898888875211000 11111 1122322
Q ss_pred hcCcCCCCceEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEE
Q psy7538 91 LRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFT 170 (543)
Q Consensus 91 ~~~~~~~~~v~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V 170 (543)
.+ |. -++..+..++++ +++..+++++|+||.+... .+ .-..+.++|++. + ..+|
T Consensus 97 ~n-p~--~~v~~~~~~~~~-------~~~~~~~~~~DvVi~~~d~------~~--------~~~~l~~~~~~~-~-~p~i 150 (249)
T 1jw9_B 97 IN-PH--IAITPVNALLDD-------AELAALIAEHDLVLDCTDN------VA--------VRNQLNAGCFAA-K-VPLV 150 (249)
T ss_dssp HC-TT--SEEEEECSCCCH-------HHHHHHHHTSSEEEECCSS------HH--------HHHHHHHHHHHH-T-CCEE
T ss_pred HC-CC--cEEEEEeccCCH-------hHHHHHHhCCCEEEEeCCC------HH--------HHHHHHHHHHHc-C-CCEE
Confidence 22 22 245566555543 3567788899999987532 11 113355677776 4 3566
Q ss_pred EEecC
Q psy7538 171 YISTA 175 (543)
Q Consensus 171 ~vST~ 175 (543)
+.+..
T Consensus 151 ~~~~~ 155 (249)
T 1jw9_B 151 SGAAI 155 (249)
T ss_dssp EEEEE
T ss_pred Eeeec
Confidence 65543
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=95.51 E-value=0.034 Score=55.38 Aligned_cols=37 Identities=14% Similarity=0.154 Sum_probs=32.4
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
-.|++|+||||+|-+|..+++.+...|. +|++..|+.
T Consensus 139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~---~V~~~~~~~ 175 (327)
T 1qor_A 139 KPDEQFLFHAAAGGVGLIACQWAKALGA---KLIGTVGTA 175 (327)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHHTC---EEEEEESSH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCC---EEEEEeCCH
Confidence 3589999999999999999999999885 788888863
|
| >1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* | Back alignment and structure |
|---|
Probab=95.48 E-value=0.27 Score=48.15 Aligned_cols=116 Identities=15% Similarity=0.068 Sum_probs=74.1
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEE-ccCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVIS-GDITQ 109 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~-gDl~~ 109 (543)
|+|.|+|| |.+|..++..|...+. +.+|.+.++.+ ++++.. .. .+.... +.......+.. .|
T Consensus 1 MkI~ViGa-G~vG~~la~~l~~~~~-~~~v~L~D~~~------~~~~g~----~~-dl~~~~-~~~~~~~~i~~t~d--- 63 (294)
T 1oju_A 1 MKLGFVGA-GRVGSTSAFTCLLNLD-VDEIALVDIAE------DLAVGE----AM-DLAHAA-AGIDKYPKIVGGAD--- 63 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSC-CSEEEEECSSH------HHHHHH----HH-HHHHHH-HTTTCCCEEEEESC---
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEECCh------HHHHHH----HH-HHHhhh-hhcCCCCEEEEeCC---
Confidence 68999998 9999999999988864 45888888864 222210 00 011111 11111222221 22
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEec
Q psy7538 110 LKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIST 174 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 174 (543)
...++++|+||-+|+..+- .+...+....|+.-.+.+.+.+.+. +...++.+=|
T Consensus 64 ----------~~a~~~aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~iivvs 118 (294)
T 1oju_A 64 ----------YSLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKILVVT 118 (294)
T ss_dssp ----------GGGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEECS
T ss_pred ----------HHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEeC
Confidence 2456899999999987643 3445678899999999999999887 5555554443
|
| >3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A | Back alignment and structure |
|---|
Probab=95.48 E-value=0.1 Score=52.84 Aligned_cols=34 Identities=21% Similarity=0.338 Sum_probs=26.9
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEe
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLM 64 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~ 64 (543)
++|.|.||||++|+.|++.|.+.++...++..+.
T Consensus 3 ~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~a 36 (366)
T 3pwk_A 3 YTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLA 36 (366)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEE
T ss_pred cEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEE
Confidence 6899999999999999998887644334666654
|
| >2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C* | Back alignment and structure |
|---|
Probab=95.42 E-value=0.059 Score=54.00 Aligned_cols=34 Identities=24% Similarity=0.501 Sum_probs=28.0
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhC-CCcCEEEEEe
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLE-PNVKKIYLLM 64 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g-~~v~~V~~l~ 64 (543)
.++|.|.||||.+|+.+++.|++++ |++ +|..+.
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~-elv~i~ 37 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVD-ELFLLA 37 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEE-EEEEEE
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCE-EEEEEE
Confidence 4789999999999999999998875 555 566665
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=95.36 E-value=0.036 Score=55.31 Aligned_cols=37 Identities=11% Similarity=0.232 Sum_probs=32.4
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
-.|++|+||||+|-+|..+++.+...|. +|++..|+.
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~---~Vi~~~~~~ 180 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHLGA---TVIGTVSTE 180 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHTTC---EEEEEESSH
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 4578999999999999999999998875 788988864
|
| >3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A | Back alignment and structure |
|---|
Probab=95.35 E-value=0.12 Score=51.86 Aligned_cols=40 Identities=18% Similarity=0.268 Sum_probs=28.4
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEe-cCCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLM-RTKKG 69 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~-R~~~~ 69 (543)
|++|.|.||||++|..|++.|.+..+...++..+. ++..|
T Consensus 1 ~~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG 41 (344)
T 3tz6_A 1 GLSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQG 41 (344)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSS
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCC
Confidence 57899999999999999997776532223566654 43333
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=95.34 E-value=0.035 Score=53.25 Aligned_cols=120 Identities=12% Similarity=0.107 Sum_probs=70.3
Q ss_pred chhhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCH-------------HHHHHHHhcCchhHHH
Q psy7538 22 DRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTP-------------NQRVEELFESPVFDAL 88 (543)
Q Consensus 22 ~~i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~-------------~~rl~~~~~~~~f~~l 88 (543)
.+-++-+++++|+|.|+ |-+|+.+++.|.+.|. ++|.++++..-..+- ..|.+. +-+++
T Consensus 20 ~~~q~~l~~~~VlvvG~-GglG~~va~~La~~Gv--g~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~-----~~~~l 91 (251)
T 1zud_1 20 LDGQQKLLDSQVLIIGL-GGLGTPAALYLAGAGV--GTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQV-----SQQRL 91 (251)
T ss_dssp HHHHHHHHTCEEEEECC-STTHHHHHHHHHHTTC--SEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHH-----HHHHH
T ss_pred HHHHHHHhcCcEEEEcc-CHHHHHHHHHHHHcCC--CeEEEEeCCCcccccCCCCccCChhhCCCHHHHH-----HHHHH
Confidence 33456678899999997 4599999999999864 688888654311000 001111 12223
Q ss_pred HhhcCcCCCCceEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCce
Q psy7538 89 KTLRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKC 168 (543)
Q Consensus 89 ~~~~~~~~~~~v~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~ 168 (543)
++.+ |. -++..+..+++ .+.+..+++++|+||.+... ... -..+-++|.+. + ..
T Consensus 92 ~~~n-p~--~~v~~~~~~~~-------~~~~~~~~~~~DvVi~~~d~------~~~--------r~~l~~~~~~~-~-~p 145 (251)
T 1zud_1 92 TQLN-PD--IQLTALQQRLT-------GEALKDAVARADVVLDCTDN------MAT--------RQEINAACVAL-N-TP 145 (251)
T ss_dssp HHHC-TT--SEEEEECSCCC-------HHHHHHHHHHCSEEEECCSS------HHH--------HHHHHHHHHHT-T-CC
T ss_pred HHHC-CC--CEEEEEeccCC-------HHHHHHHHhcCCEEEECCCC------HHH--------HHHHHHHHHHh-C-CC
Confidence 3322 22 24555544443 34677888899999987532 111 12355677775 4 45
Q ss_pred EEEEecC
Q psy7538 169 FTYISTA 175 (543)
Q Consensus 169 ~V~vST~ 175 (543)
+|+.++.
T Consensus 146 ~i~~~~~ 152 (251)
T 1zud_1 146 LITASAV 152 (251)
T ss_dssp EEEEEEE
T ss_pred EEEEecc
Confidence 7776654
|
| >3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=95.31 E-value=0.02 Score=57.06 Aligned_cols=119 Identities=19% Similarity=0.163 Sum_probs=74.4
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++.++|.|+|+ |.+|..++..|+..+. . +|.++++.+... +.-..++.+...+. ....++.. ..|
T Consensus 3 m~~~kI~iiGa-G~vG~~~a~~l~~~~~-~-~v~l~Di~~~~~--~g~a~dL~~~~~~~--------~~~~~v~~-t~d- 67 (321)
T 3p7m_A 3 MARKKITLVGA-GNIGGTLAHLALIKQL-G-DVVLFDIAQGMP--NGKALDLLQTCPIE--------GVDFKVRG-TND- 67 (321)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHTTC-C-EEEEECSSSSHH--HHHHHHHHTTHHHH--------TCCCCEEE-ESC-
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCC-c-eEEEEeCChHHH--HHHHHHHHhhhhhc--------CCCcEEEE-cCC-
Confidence 45689999994 9999999999988865 2 788888875321 11111221111100 01112221 122
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEec
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIST 174 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 174 (543)
. ..++++|+||.+|+..+- .+...+.+..|+.-.+.+.+.+.+. ....++.+-|
T Consensus 68 -----------~-~a~~~aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~vivvt 122 (321)
T 3p7m_A 68 -----------Y-KDLENSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHN-CPNAFVICIT 122 (321)
T ss_dssp -----------G-GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECC
T ss_pred -----------H-HHHCCCCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHH-CCCcEEEEec
Confidence 1 356899999999987643 3445667889999999999998886 4454444333
|
| >3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} | Back alignment and structure |
|---|
Probab=95.31 E-value=0.2 Score=49.56 Aligned_cols=117 Identities=14% Similarity=0.105 Sum_probs=71.4
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|.|+|+ |.+|..++..|+..+. +.+|.++++.... .+....++.+...+ ......+...| +.
T Consensus 1 Mkv~ViGa-G~vG~~~a~~l~~~~~-~~el~l~D~~~~k--~~g~a~DL~~~~~~----------~~~~~~v~~~~--~~ 64 (314)
T 3nep_X 1 MKVTVIGA-GNVGATVAECVARQDV-AKEVVMVDIKDGM--PQGKALDMRESSPI----------HGFDTRVTGTN--DY 64 (314)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC-SSEEEEECSSTTH--HHHHHHHHHHHHHH----------HTCCCEEEEES--SS
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCchHH--HHHHHHHHhccccc----------cCCCcEEEECC--CH
Confidence 68999996 9999999999998864 4689998887632 11111122111000 01122222111 11
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEec
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIST 174 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 174 (543)
..++++|+||-+|+..+- .+...+.++.|+.-.+.+.+.+.+. ....++.+-|
T Consensus 65 ----------~a~~~aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~vivvt 118 (314)
T 3nep_X 65 ----------GPTEDSDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEG-SPDSTIIVVA 118 (314)
T ss_dssp ----------GGGTTCSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTT-CTTCEEEECC
T ss_pred ----------HHhCCCCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEecC
Confidence 346899999999987642 2344567899999999999999886 4555554443
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=95.22 E-value=0.012 Score=58.38 Aligned_cols=117 Identities=16% Similarity=0.195 Sum_probs=69.5
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
++|.|+|| |.+|..++..|...|. + .|.++++.... .+....++.+...+ .....++... .|
T Consensus 3 ~kI~VIGa-G~vG~~~a~~la~~g~-~-~v~L~Di~~~~--~~g~~~dl~~~~~~--------~~~~~~i~~t-~d---- 64 (309)
T 1ur5_A 3 KKISIIGA-GFVGSTTAHWLAAKEL-G-DIVLLDIVEGV--PQGKALDLYEASPI--------EGFDVRVTGT-NN---- 64 (309)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-S-EEEEECSSSSH--HHHHHHHHHTTHHH--------HTCCCCEEEE-SC----
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCC-C-eEEEEeCCccH--HHHHHHhHHHhHhh--------cCCCeEEEEC-CC----
Confidence 68999998 9999999999988864 3 47777776421 11111122111000 0011222221 22
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCCCc-ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecC
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIRFD-EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTA 175 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~ 175 (543)
+ ..++++|+||.+|+..+-. ....+....|+...+.+.+.+.+. ....+|.+.|-
T Consensus 65 --------~-~a~~~aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~vi~~tN 120 (309)
T 1ur5_A 65 --------Y-ADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPL-SPNAVIIMVNN 120 (309)
T ss_dssp --------G-GGGTTCSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGG-CTTCEEEECCS
T ss_pred --------H-HHHCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEcCC
Confidence 3 3468999999999875422 222345678888889999988887 56777766653
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=95.13 E-value=0.11 Score=51.95 Aligned_cols=118 Identities=14% Similarity=0.120 Sum_probs=72.6
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHH-HHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRV-EELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl-~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+.|+|.|.|| |.+|..++..|.+.|+ + .|.+.++.... .++. .++. +.+. . .....++...
T Consensus 8 ~~~kI~VIGa-G~vG~~lA~~la~~g~-~-~V~L~D~~~~~---~~~~~~~l~-----~~~~-~--~~~~~~i~~t---- 69 (331)
T 1pzg_A 8 RRKKVAMIGS-GMIGGTMGYLCALREL-A-DVVLYDVVKGM---PEGKALDLS-----HVTS-V--VDTNVSVRAE---- 69 (331)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTC-C-EEEEECSSSSH---HHHHHHHHH-----HHHH-H--TTCCCCEEEE----
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC-C-eEEEEECChhH---HHHHHHHHH-----hhhh-c--cCCCCEEEEe----
Confidence 3579999998 9999999999999875 2 58888876421 1111 1110 0000 0 0011223221
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCccCCC-cc-----cHHHHHHHHHHHHHHHHHHHHhccCCceEEEEec
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAATIRF-DE-----PIKTAVILNTRGTRDMLELSKQMKNLKCFTYIST 174 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~-----~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 174 (543)
.+++..++++|+||-+++...- .. ...+....|+.-.+.+.+.+.+. ....++.+.|
T Consensus 70 ---------~d~~ea~~~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~vi~~t 132 (331)
T 1pzg_A 70 ---------YSYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKY-CPKTFIIVVT 132 (331)
T ss_dssp ---------CSHHHHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEEEECC
T ss_pred ---------CCHHHHhCCCCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEEc
Confidence 1466677999999999976532 22 23345677888888888888876 4455655555
|
| >1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A* | Back alignment and structure |
|---|
Probab=95.09 E-value=0.061 Score=54.54 Aligned_cols=39 Identities=15% Similarity=0.356 Sum_probs=29.4
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhC-CCcCEEEEEecCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLE-PNVKKIYLLMRTKKG 69 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g-~~v~~V~~l~R~~~~ 69 (543)
++|.|.||||.+|+.|+++|+... ..+..|+.+.....+
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~G 41 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLG 41 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTT
T ss_pred cEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCCC
Confidence 689999999999999999666552 234578877765443
|
| >3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* | Back alignment and structure |
|---|
Probab=95.05 E-value=0.21 Score=49.54 Aligned_cols=117 Identities=13% Similarity=0.156 Sum_probs=75.5
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHH-HhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEE-LFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~-~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+.++|.|+|| |.+|..++..|+..+. +.+|.++++.. +|++. ..+ +-+. . +.....+.+.. |
T Consensus 5 ~~~KI~IIGa-G~vG~~la~~l~~~~~-~~ei~L~Di~~------~~~~g~~~d--l~~~----~-~~~~~~~~v~~-~- 67 (317)
T 3d0o_A 5 KGNKVVLIGN-GAVGSSYAFSLVNQSI-VDELVIIDLDT------EKVRGDVMD--LKHA----T-PYSPTTVRVKA-G- 67 (317)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHCS-CSEEEEECSCH------HHHHHHHHH--HHHH----G-GGSSSCCEEEE-C-
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCCh------hHhhhhhhh--HHhh----h-hhcCCCeEEEe-C-
Confidence 4579999998 9999999999998863 45788887652 33321 100 0000 0 11112333332 2
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEec
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIST 174 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 174 (543)
+ ...++++|+||-+|+..+- .+...+....|+.-.+.+.+.+.+. ....+|.+.|
T Consensus 68 -~----------~~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~t 123 (317)
T 3d0o_A 68 -E----------YSDCHDADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMAS-KFDGIFLVAT 123 (317)
T ss_dssp -C----------GGGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEECS
T ss_pred -C----------HHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEec
Confidence 1 1346899999999987643 3444567888999999999988887 5666666655
|
| >1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=95.04 E-value=0.022 Score=57.59 Aligned_cols=34 Identities=15% Similarity=0.301 Sum_probs=28.7
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRT 66 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~ 66 (543)
++|.|.||||.+|+.+++.|++. +++ +|..+.|+
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~-p~~-ev~~i~~s 42 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADH-PMF-ELTALAAS 42 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTC-SSE-EEEEEEEC
T ss_pred ceEEEECcCCHHHHHHHHHHhcC-CCC-EEEEEEcc
Confidence 58999999999999999998876 566 68777653
|
| >3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A | Back alignment and structure |
|---|
Probab=95.01 E-value=0.12 Score=52.19 Aligned_cols=39 Identities=18% Similarity=0.329 Sum_probs=27.4
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCC-cCEEEEEecCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPN-VKKIYLLMRTKKG 69 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~-v~~V~~l~R~~~~ 69 (543)
++|.|.||||++|+.|+++||...|- ..++..+.-+..|
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG 40 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIG 40 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSSTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccccC
Confidence 57999999999999999966665441 2366655433344
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=94.97 E-value=0.061 Score=53.89 Aligned_cols=37 Identities=16% Similarity=0.214 Sum_probs=32.0
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
-.|++|+|+||+|-+|..+++.+...|. +|++..|+.
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~---~V~~~~~~~ 190 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMMGC---YVVGSAGSK 190 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESSH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 3589999999999999999998888875 788888863
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=94.90 E-value=0.077 Score=53.44 Aligned_cols=37 Identities=22% Similarity=0.179 Sum_probs=32.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
-.|++|+|+||+|-+|..+++.+...|. +|++..|++
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga---~Vi~~~~~~ 205 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAYGL---KILGTAGTE 205 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESSH
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCh
Confidence 3578999999999999999999988875 788888864
|
| >3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=94.86 E-value=0.15 Score=50.42 Aligned_cols=119 Identities=13% Similarity=0.095 Sum_probs=73.6
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
+.++|.|+|+ |.+|..++..|...|. .+|.+.++... +++.+... ..+.+.... .....++..- .|
T Consensus 7 ~~~kv~ViGa-G~vG~~ia~~l~~~g~--~~v~l~D~~~~----~~~~~g~a-~dl~~~~~~---~~~~~~i~~t-~d-- 72 (315)
T 3tl2_A 7 KRKKVSVIGA-GFTGATTAFLLAQKEL--ADVVLVDIPQL----ENPTKGKA-LDMLEASPV---QGFDANIIGT-SD-- 72 (315)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTC--CEEEEECCGGG----HHHHHHHH-HHHHHHHHH---HTCCCCEEEE-SC--
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC--CeEEEEeccch----HHHHHHhh-hhHHHhhhh---ccCCCEEEEc-CC--
Confidence 4579999996 9999999999999875 58888888631 11121110 001111000 0111233221 12
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEe
Q psy7538 109 QLKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIS 173 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vS 173 (543)
. ..++++|+||-+|+..+- .+...+.++.|+.-.+.+.+.+.+. ....++.+=
T Consensus 73 ----------~-~a~~~aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~vlvv 126 (315)
T 3tl2_A 73 ----------Y-ADTADSDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKH-SPNAIIVVL 126 (315)
T ss_dssp ----------G-GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEC
T ss_pred ----------H-HHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEC
Confidence 1 245899999999987653 3455678899999999999998886 444444433
|
| >2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A | Back alignment and structure |
|---|
Probab=94.86 E-value=0.13 Score=50.75 Aligned_cols=109 Identities=10% Similarity=0.132 Sum_probs=72.8
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHH----HHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVE----ELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~----~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
|+|.|+|| |.+|..++-.|+..+. +.+|.++++.. +|++ ++.+.. + ....+.+..+|
T Consensus 1 ~KI~IiGa-G~vG~~~a~~l~~~~~-~~el~L~Di~~------~k~~g~a~dl~~~~----------~-~~~~~~v~~~~ 61 (310)
T 2xxj_A 1 MKVGIVGS-GMVGSATAYALALLGV-AREVVLVDLDR------KLAQAHAEDILHAT----------P-FAHPVWVWAGS 61 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSH------HHHHHHHHHHHTTG----------G-GSCCCEEEECC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCCh------hHHHHHHHHHHHhH----------h-hcCCeEEEECC
Confidence 58999998 9999999999988753 56899998863 3333 221110 1 11233333322
Q ss_pred CCCCCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEE
Q psy7538 107 ITQLKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYI 172 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~v 172 (543)
. ..++++|+||.+|+..+- .....+....|+.-.+.+.+.+.+. ....++.+
T Consensus 62 ---~----------~a~~~aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv 114 (310)
T 2xxj_A 62 ---Y----------GDLEGARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEA-APEAVLLV 114 (310)
T ss_dssp ---G----------GGGTTEEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEE
T ss_pred ---H----------HHhCCCCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHH-CCCcEEEE
Confidence 1 236899999999987643 3344567888999999999988886 45555544
|
| >2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=94.76 E-value=0.3 Score=48.63 Aligned_cols=110 Identities=13% Similarity=0.137 Sum_probs=71.3
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHH----HHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVE----ELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~----~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
.++|.|+|| |.+|..++-.|+..+ -+.+|.++++.. +|++ ++.+.. + ....+.+..+
T Consensus 9 ~~KI~IiGa-G~vG~~la~~l~~~~-~~~el~L~Di~~------~~~~g~~~dl~~~~----------~-~~~~~~i~~~ 69 (326)
T 2zqz_A 9 HQKVILVGD-GAVGSSYAYAMVLQG-IAQEIGIVDIFK------DKTKGDAIDLSNAL----------P-FTSPKKIYSA 69 (326)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHT-CCSEEEEECSCH------HHHHHHHHHHHTTG----------G-GSCCCEEEEC
T ss_pred CCEEEEECC-CHHHHHHHHHHHcCC-CCCEEEEEeCCc------hHhHHHHHHHHHHH----------H-hcCCeEEEEC
Confidence 468999998 999999999998875 356898888842 3332 221110 1 1123333322
Q ss_pred cCCCCCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEE
Q psy7538 106 DITQLKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYI 172 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~v 172 (543)
| ...++++|+||.+|+..+- .....+....|+...+.+.+.+.+. ....+|.+
T Consensus 70 ~-------------~~a~~~aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv 123 (326)
T 2zqz_A 70 E-------------YSDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDS-GFNGIFLV 123 (326)
T ss_dssp C-------------GGGGGGCSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHH-TCCSEEEE
T ss_pred C-------------HHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEE
Confidence 1 1236899999999987542 2334467788999999999988886 45555544
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=94.76 E-value=0.033 Score=52.55 Aligned_cols=72 Identities=14% Similarity=0.153 Sum_probs=51.1
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
..++|+|.|+ |.+|+.+++.|.+.|+ |.++.|.+ ++++.+ . .++.++.||.+
T Consensus 8 ~~~~viI~G~-G~~G~~la~~L~~~g~----v~vid~~~------~~~~~~--------------~---~~~~~i~gd~~ 59 (234)
T 2aef_A 8 KSRHVVICGW-SESTLECLRELRGSEV----FVLAEDEN------VRKKVL--------------R---SGANFVHGDPT 59 (234)
T ss_dssp --CEEEEESC-CHHHHHHHHHSTTSEE----EEEESCGG------GHHHHH--------------H---TTCEEEESCTT
T ss_pred CCCEEEEECC-ChHHHHHHHHHHhCCe----EEEEECCH------HHHHHH--------------h---cCCeEEEcCCC
Confidence 3468999997 9999999999998763 56666653 222221 1 35788999998
Q ss_pred CCCCCCCHHHHHHH-hcCccEEEEcCc
Q psy7538 109 QLKLGISEIDKKEL-IDNVDIVYHVAA 134 (543)
Q Consensus 109 ~~~lgls~~~~~~l-~~~vd~ViH~AA 134 (543)
+++ .+..+ ++++|.||-+..
T Consensus 60 ~~~------~l~~a~i~~ad~vi~~~~ 80 (234)
T 2aef_A 60 RVS------DLEKANVRGARAVIVDLE 80 (234)
T ss_dssp CHH------HHHHTTCTTCSEEEECCS
T ss_pred CHH------HHHhcCcchhcEEEEcCC
Confidence 865 56665 788999997653
|
| >3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=94.73 E-value=0.16 Score=51.58 Aligned_cols=40 Identities=18% Similarity=0.307 Sum_probs=28.2
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCC-cCEEEEEecCCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPN-VKKIYLLMRTKKG 69 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~-v~~V~~l~R~~~~ 69 (543)
.++|.|.||||++|+.|+++||...|- ..++..+.-+..+
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG 44 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSNAG 44 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSCTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEechhcC
Confidence 468999999999999999966665341 2366665433433
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=94.70 E-value=0.028 Score=56.78 Aligned_cols=37 Identities=8% Similarity=0.066 Sum_probs=32.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
-.|++|+||||+|-+|..+++.+...|. +|++..|+.
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga---~Vi~~~~~~ 197 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMAGA---IPLVTAGSQ 197 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESCH
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHcCC---EEEEEeCCH
Confidence 4578999999999999999999988875 788888864
|
| >1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=94.69 E-value=0.05 Score=54.71 Aligned_cols=180 Identities=18% Similarity=0.171 Sum_probs=90.6
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEe-cCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLM-RTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~-R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
..+|.|.||||++|..|++.|.+. |.+ +|..+. ++..|+. +.+.+ |... .|+.
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~h-P~~-el~~l~S~~~aG~~----~~~~~-------------p~~~-------~~l~ 66 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNH-PEA-KITYLSSRTYAGKK----LEEIF-------------PSTL-------ENSI 66 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHC-TTE-EEEEEECSTTTTSB----HHHHC-------------GGGC-------CCCB
T ss_pred eeEEEEECCCCHHHHHHHHHHHcC-CCc-EEEEEeCcccccCC----hHHhC-------------hhhc-------cCce
Confidence 458999999999999999999877 776 566554 3334432 22221 1111 2332
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCcccccc
Q psy7538 109 QLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERT 188 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i~E~~ 188 (543)
-.++ +.+.+.+++|+||-|++.. . ++.+...+ . +. ++|=.|+++-..+. .+-|+.
T Consensus 67 ~~~~-----~~~~~~~~~Dvvf~alp~~---~------------s~~~~~~~--~-g~-~VIDlSsdfRl~~~-~~y~~~ 121 (351)
T 1vkn_A 67 LSEF-----DPEKVSKNCDVLFTALPAG---A------------SYDLVREL--K-GV-KIIDLGADFRFDDP-GVYREW 121 (351)
T ss_dssp CBCC-----CHHHHHHHCSEEEECCSTT---H------------HHHHHTTC--C-SC-EEEESSSTTTCSSH-HHHHHH
T ss_pred EEeC-----CHHHhhcCCCEEEECCCcH---H------------HHHHHHHh--C-CC-EEEECChhhhCCch-hhhhhh
Confidence 2221 2333446899999876531 1 12222233 2 33 57777777543221 111222
Q ss_pred cCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCC---cEEEEecCeeeecCCCCC
Q psy7538 189 YLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGM---PCMILRPSIVVPIYKEPL 262 (543)
Q Consensus 189 y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~l---p~~IlRps~V~G~~~~p~ 262 (543)
|..+....+++...--+.|-.-+.+....+-.-||.|+..=.++=.-+.+.. .+ ++++-=-+.+-|.++.+.
T Consensus 122 y~~~h~~p~~~~~~yglPE~n~e~i~~a~iIANPgC~~t~~~laL~PL~~~~--~i~~~~iiv~t~sgvSGAG~~~~ 196 (351)
T 1vkn_A 122 YGKELSGYENIKRVYGLPELHREEIKNAQVVGNPGCYPTSVILALAPALKHN--LVDPETILVDAKSGVSGAGRKEK 196 (351)
T ss_dssp HCCCCTTGGGCCEEECCHHHHHHHHTTCSEEECCCHHHHHHHHHHHHHHHTT--CSCCSEEEEEEEEEGGGGCSCCS
T ss_pred cCCCCCchhhcCCceECCccCHHHhccCCEEeCCChHHHHHHHHHHHHHHcC--CCCCCEEEEEEEeeccccCcccc
Confidence 2222111000000000111111122222233457999887777666665543 34 466666778888877653
|
| >1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=94.59 E-value=0.23 Score=49.26 Aligned_cols=114 Identities=13% Similarity=0.112 Sum_probs=69.3
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
.++|.|+|| |.+|..++-.|+..+. +.+|.++++.. +|++... ..|.... + ....+.+..+|
T Consensus 5 ~~KI~IiGa-G~vG~~~a~~l~~~~~-~~el~L~Di~~------~~~~g~~-----~dl~~~~-~-~~~~~~v~~~~--- 66 (318)
T 1ez4_A 5 HQKVVLVGD-GAVGSSYAFAMAQQGI-AEEFVIVDVVK------DRTKGDA-----LDLEDAQ-A-FTAPKKIYSGE--- 66 (318)
T ss_dssp BCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSH------HHHHHHH-----HHHHGGG-G-GSCCCEEEECC---
T ss_pred CCEEEEECC-CHHHHHHHHHHHcCCC-CCEEEEEeCCc------hHHHHHH-----HHHHHHH-H-hcCCeEEEECC---
Confidence 379999998 9999999999998853 56898888843 3333100 0011000 1 11233333221
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEE
Q psy7538 110 LKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYI 172 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~v 172 (543)
...++++|+||.+|+..+- .+...+....|+...+.+.+.+.+. ....++.+
T Consensus 67 ----------~~a~~~aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv 119 (318)
T 1ez4_A 67 ----------YSDCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDS-GFDGIFLV 119 (318)
T ss_dssp ----------GGGGTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHT-TCCSEEEE
T ss_pred ----------HHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEE
Confidence 1336899999999987542 2223356788999999999998887 55555554
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=94.58 E-value=0.13 Score=50.23 Aligned_cols=37 Identities=14% Similarity=0.148 Sum_probs=32.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
.++++++|+|+ |-+|+.++..|.+.|. ++|++..|..
T Consensus 125 l~~k~vlVlGa-GG~g~aia~~L~~~G~--~~v~i~~R~~ 161 (283)
T 3jyo_A 125 AKLDSVVQVGA-GGVGNAVAYALVTHGV--QKLQVADLDT 161 (283)
T ss_dssp CCCSEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSSH
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCC--CEEEEEECCH
Confidence 57899999997 8899999999999864 5799999974
|
| >3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* | Back alignment and structure |
|---|
Probab=94.57 E-value=0.3 Score=48.54 Aligned_cols=118 Identities=17% Similarity=0.114 Sum_probs=71.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++.++|.|+|| |.+|..++..|+..|. . +|.++++.+... +.-..++.+...+ .....++.. ..|
T Consensus 5 m~~~kI~viGa-G~vG~~~a~~l~~~~~-~-~v~L~Di~~~~~--~g~~~dl~~~~~~--------~~~~~~v~~-t~d- 69 (324)
T 3gvi_A 5 MARNKIALIGS-GMIGGTLAHLAGLKEL-G-DVVLFDIAEGTP--QGKGLDIAESSPV--------DGFDAKFTG-AND- 69 (324)
T ss_dssp -CCCEEEEECC-SHHHHHHHHHHHHTTC-C-EEEEECSSSSHH--HHHHHHHHHHHHH--------HTCCCCEEE-ESS-
T ss_pred CcCCEEEEECC-CHHHHHHHHHHHhCCC-C-eEEEEeCCchhH--HHHHHHHhchhhh--------cCCCCEEEE-eCC-
Confidence 45689999998 9999999999998876 2 788888865321 1101111110000 001122221 122
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEe
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIS 173 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vS 173 (543)
. ..++++|+||-+|+..+- .+...+.+..|+.-.+.+.+.+.+. ....++.+-
T Consensus 70 -----------~-~a~~~aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~iivv 123 (324)
T 3gvi_A 70 -----------Y-AAIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKY-APEAFVICI 123 (324)
T ss_dssp -----------G-GGGTTCSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHH-CTTCEEEEC
T ss_pred -----------H-HHHCCCCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHH-CCCeEEEec
Confidence 2 356899999999986542 2333456788999999999998886 444444433
|
| >7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A* | Back alignment and structure |
|---|
Probab=94.43 E-value=0.15 Score=51.52 Aligned_cols=118 Identities=20% Similarity=0.183 Sum_probs=71.0
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCE---EEE--EecCCCCCCHHHHHH----HHhcCchhHHHHhhcCcCCCCc
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKK---IYL--LMRTKKGKTPNQRVE----ELFESPVFDALKTLRGKSILQK 99 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~---V~~--l~R~~~~~~~~~rl~----~~~~~~~f~~l~~~~~~~~~~~ 99 (543)
+.++|.|+||+|.+|.+++-.|+..+ -+.+ |.+ +...+. +++++ ++.+.. .....+
T Consensus 31 ~~~KV~ViGAaG~VG~~la~~l~~~~-l~~e~~~l~L~d~d~~~~----~~~~~G~amDL~h~~----------~p~~~~ 95 (375)
T 7mdh_A 31 KLVNIAVSGAAGMISNHLLFKLASGE-VFGQDQPIALKLLGSERS----FQALEGVAMELEDSL----------YPLLRE 95 (375)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTT-TTCTTCCEEEEEECCGGG----HHHHHHHHHHHHTTT----------CTTEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHcCC-cCCCCceeEEEecCccch----hhhhHHHHHhHHhhh----------hhhcCC
Confidence 46799999999999999999988764 2222 433 333321 22222 221110 001122
Q ss_pred eEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCC-CcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEec
Q psy7538 100 IQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIR-FDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIST 174 (543)
Q Consensus 100 v~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 174 (543)
+... . +-...++++|+||-+|+..+ ..+...+.++.|+.-.+.+.+.+.+..+...+|.+-|
T Consensus 96 v~i~-----~--------~~y~~~~daDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvs 158 (375)
T 7mdh_A 96 VSIG-----I--------DPYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG 158 (375)
T ss_dssp EEEE-----S--------CHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred cEEe-----c--------CCHHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence 2221 1 12355689999999998765 3456678899999999999998887412234444333
|
| >4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A* | Back alignment and structure |
|---|
Probab=94.39 E-value=0.13 Score=51.89 Aligned_cols=40 Identities=20% Similarity=0.310 Sum_probs=29.1
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEE-ecCCCCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLL-MRTKKGKT 71 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l-~R~~~~~~ 71 (543)
..+|.|.||||++|..|++.|.+. |.+ +|..+ +|+..|+.
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~h-P~~-el~~l~S~~saGk~ 47 (359)
T 4dpk_A 7 TLKAAILGATGLVGIEYVRMLSNH-PYI-KPAYLAGKGSVGKP 47 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTC-SSE-EEEEEEESTTTTSB
T ss_pred CCeEEEECCCCHHHHHHHHHHHhC-CCc-eEEEEECchhcCCC
Confidence 468999999999999999966654 776 55544 45444543
|
| >4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A* | Back alignment and structure |
|---|
Probab=94.39 E-value=0.13 Score=51.89 Aligned_cols=40 Identities=20% Similarity=0.310 Sum_probs=29.1
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEE-ecCCCCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLL-MRTKKGKT 71 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l-~R~~~~~~ 71 (543)
..+|.|.||||++|..|++.|.+. |.+ +|..+ +|+..|+.
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~h-P~~-el~~l~S~~saGk~ 47 (359)
T 4dpl_A 7 TLKAAILGATGLVGIEYVRMLSNH-PYI-KPAYLAGKGSVGKP 47 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTC-SSE-EEEEEEESTTTTSB
T ss_pred CCeEEEECCCCHHHHHHHHHHHhC-CCc-eEEEEECchhcCCC
Confidence 468999999999999999966654 776 55544 45444543
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=94.28 E-value=0.13 Score=51.69 Aligned_cols=37 Identities=22% Similarity=0.174 Sum_probs=31.6
Q ss_pred cCC--CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecC
Q psy7538 28 YEN--KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRT 66 (543)
Q Consensus 28 ~~~--~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~ 66 (543)
-.| ++|+||||+|-+|..+++.+...|. ++|++..|+
T Consensus 157 ~~g~~~~vlI~GasggiG~~~~~~a~~~Ga--~~Vi~~~~~ 195 (357)
T 2zb4_A 157 TAGSNKTMVVSGAAGACGSVAGQIGHFLGC--SRVVGICGT 195 (357)
T ss_dssp CTTSCCEEEESSTTBHHHHHHHHHHHHTTC--SEEEEEESC
T ss_pred CCCCccEEEEECCCcHHHHHHHHHHHHCCC--CeEEEEeCC
Confidence 357 9999999999999999998888874 378888886
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=94.28 E-value=0.064 Score=53.75 Aligned_cols=38 Identities=13% Similarity=0.297 Sum_probs=32.5
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKK 68 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~ 68 (543)
-.|++|+|+||+|-+|...++.+...|. +|++..|+..
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga---~Vi~~~~~~~ 195 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMGA---KVIAVVNRTA 195 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESSGG
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCC---EEEEEeCCHH
Confidence 3589999999999999999998888875 7888888653
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=94.26 E-value=0.042 Score=53.26 Aligned_cols=36 Identities=22% Similarity=0.262 Sum_probs=31.4
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
+++++++|+|+ |-+|+.++..|++.|. +|++..|+.
T Consensus 117 l~~k~vlViGa-Gg~g~a~a~~L~~~G~---~V~v~~R~~ 152 (271)
T 1nyt_A 117 RPGLRILLIGA-GGASRGVLLPLLSLDC---AVTITNRTV 152 (271)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTC---EEEEECSSH
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHcCC---EEEEEECCH
Confidence 46899999998 6799999999999984 888888874
|
| >2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=94.25 E-value=0.12 Score=51.93 Aligned_cols=33 Identities=15% Similarity=0.437 Sum_probs=27.8
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEe
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLM 64 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~ 64 (543)
.++|.|.||||.+|+.+++.|++. |++ +|..+.
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~-p~~-elvai~ 36 (350)
T 2ep5_A 4 KIKVSLLGSTGMVGQKMVKMLAKH-PYL-ELVKVS 36 (350)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTTC-SSE-EEEEEE
T ss_pred CcEEEEECcCCHHHHHHHHHHHhC-CCc-EEEEEe
Confidence 468999999999999999988876 666 677775
|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* | Back alignment and structure |
|---|
Probab=94.22 E-value=0.18 Score=49.26 Aligned_cols=121 Identities=15% Similarity=0.238 Sum_probs=69.2
Q ss_pred hhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcC---------chhHHHHhhcCcC
Q psy7538 25 AKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFES---------PVFDALKTLRGKS 95 (543)
Q Consensus 25 ~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~---------~~f~~l~~~~~~~ 95 (543)
++-+++++|+|.|+ |-+|+.+++.|.+.| |.+|.++++..-..+...|. ++.. ..-++|+..+ |.
T Consensus 31 q~kL~~~~VlVvGa-GGlGs~va~~La~aG--VG~i~lvD~D~Ve~sNL~Rq--~~~~~diG~~Ka~aa~~~L~~iN-P~ 104 (292)
T 3h8v_A 31 YEKIRTFAVAIVGV-GGVGSVTAEMLTRCG--IGKLLLFDYDKVELANMNRL--FFQPHQAGLSKVQAAEHTLRNIN-PD 104 (292)
T ss_dssp -CGGGGCEEEEECC-SHHHHHHHHHHHHHT--CSEEEEECCCBC--------------CCTTSBHHHHHHHHHHHHC-TT
T ss_pred HHHHhCCeEEEECc-CHHHHHHHHHHHHcC--CCEEEEECCCccChhhcccc--cCChhhcCchHHHHHHHHHHhhC-CC
Confidence 45677899999995 779999999999996 56898888765333333331 1110 1223333333 32
Q ss_pred CCCceEEEEccCCCCCCCCCHHHHHHHh-----------cCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhcc
Q psy7538 96 ILQKIQVISGDITQLKLGISEIDKKELI-----------DNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMK 164 (543)
Q Consensus 96 ~~~~v~~i~gDl~~~~lgls~~~~~~l~-----------~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~ 164 (543)
-+++.+..++++.+ .+..++ +++|+|+.+.-. ... -..+-++|.+.
T Consensus 105 --v~v~~~~~~l~~~~------~~~~~~~~~~~~~l~~~~~~DlVid~~Dn------~~~--------R~~in~~c~~~- 161 (292)
T 3h8v_A 105 --VLFEVHNYNITTVE------NFQHFMDRISNGGLEEGKPVDLVLSCVDN------FEA--------RMTINTACNEL- 161 (292)
T ss_dssp --SEEEEECCCTTSHH------HHHHHHHHHHHBSSSTTBCCSEEEECCSS------HHH--------HHHHHHHHHHH-
T ss_pred --cEEEEecccCCcHH------HHHHHhhhhcccccccCCCCCEEEECCcc------hhh--------hhHHHHHHHHh-
Confidence 35666666666422 444443 689999977532 111 12355677776
Q ss_pred CCceEEEEecC
Q psy7538 165 NLKCFTYISTA 175 (543)
Q Consensus 165 ~l~~~V~vST~ 175 (543)
+ +.+|+.+..
T Consensus 162 ~-~Pli~~gv~ 171 (292)
T 3h8v_A 162 G-QTWMESGVS 171 (292)
T ss_dssp T-CCEEEEEEC
T ss_pred C-CCEEEeeee
Confidence 4 467776543
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=94.20 E-value=0.18 Score=51.93 Aligned_cols=73 Identities=16% Similarity=0.280 Sum_probs=53.8
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+++|+|.|+ |-+|+.+++.|.+.|. .|.++.+.. ++++.+ + ..++.++.||.++
T Consensus 4 ~~~viIiG~-Gr~G~~va~~L~~~g~---~vvvId~d~------~~v~~~---------~-------~~g~~vi~GDat~ 57 (413)
T 3l9w_A 4 GMRVIIAGF-GRFGQITGRLLLSSGV---KMVVLDHDP------DHIETL---------R-------KFGMKVFYGDATR 57 (413)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTC---CEEEEECCH------HHHHHH---------H-------HTTCCCEESCTTC
T ss_pred CCeEEEECC-CHHHHHHHHHHHHCCC---CEEEEECCH------HHHHHH---------H-------hCCCeEEEcCCCC
Confidence 467999995 9999999999999986 677887764 344332 1 1246688999998
Q ss_pred CCCCCCHHHHHHH-hcCccEEEEcCc
Q psy7538 110 LKLGISEIDKKEL-IDNVDIVYHVAA 134 (543)
Q Consensus 110 ~~lgls~~~~~~l-~~~vd~ViH~AA 134 (543)
++ .++.+ ++++|+||-+..
T Consensus 58 ~~------~L~~agi~~A~~viv~~~ 77 (413)
T 3l9w_A 58 MD------LLESAGAAKAEVLINAID 77 (413)
T ss_dssp HH------HHHHTTTTTCSEEEECCS
T ss_pred HH------HHHhcCCCccCEEEECCC
Confidence 76 46665 678999986543
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=94.15 E-value=0.042 Score=55.12 Aligned_cols=37 Identities=3% Similarity=0.040 Sum_probs=32.0
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
-.|++|+|+||+|-+|..+++.+...|. +|++..|+.
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~~G~---~Vi~~~~~~ 201 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKLFGA---RVIATAGSE 201 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHHTTC---EEEEEESSH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 3578999999999999999998888875 788888863
|
| >4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... | Back alignment and structure |
|---|
Probab=94.13 E-value=0.17 Score=50.41 Aligned_cols=115 Identities=17% Similarity=0.183 Sum_probs=74.7
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHH----HHhcCchhHHHHhhcCcCCCCceEE
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVE----ELFESPVFDALKTLRGKSILQKIQV 102 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~----~~~~~~~f~~l~~~~~~~~~~~v~~ 102 (543)
....++|.|+|| |.+|..++..|+..| -+.+|.++++.. ++++ ++.+...| + .....
T Consensus 16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~-~~~el~L~Di~~------~~~~g~a~DL~~~~~~--------~---~~~~i 76 (331)
T 4aj2_A 16 QVPQNKITVVGV-GAVGMACAISILMKD-LADELALVDVIE------DKLKGEMMDLQHGSLF--------L---KTPKI 76 (331)
T ss_dssp -CCSSEEEEECC-SHHHHHHHHHHHHTT-CCSEEEEECSCH------HHHHHHHHHHHHTGGG--------C---SCCEE
T ss_pred cCCCCEEEEECC-CHHHHHHHHHHHhCC-CCceEEEEeCCh------HHHHHHHHhhhhhhhc--------c---CCCeE
Confidence 456789999997 999999999999886 345788888753 2222 22211111 1 11112
Q ss_pred E-EccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEec
Q psy7538 103 I-SGDITQLKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIST 174 (543)
Q Consensus 103 i-~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 174 (543)
+ .+| ++ .++++|+||-+|+..+- .+...+.++.|+.-.+.+.+.+.+. ....++.+-|
T Consensus 77 ~~~~d------------~~-~~~~aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~-~p~a~vlvvt 136 (331)
T 4aj2_A 77 VSSKD------------YS-VTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKY-SPQCKLLIVS 136 (331)
T ss_dssp EECSS------------GG-GGTTEEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEEEECS
T ss_pred EEcCC------------HH-HhCCCCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEec
Confidence 2 222 22 36899999999987643 3445568899999999999988886 4455544443
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=94.13 E-value=0.14 Score=51.00 Aligned_cols=37 Identities=14% Similarity=0.156 Sum_probs=32.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
-.|++|+|+||+|-+|...++.+...|. +|++..|+.
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga---~Vi~~~~~~ 184 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARLKGC---RVVGIAGGA 184 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESSH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 4589999999999999999988888875 888888864
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=94.12 E-value=0.055 Score=53.58 Aligned_cols=38 Identities=21% Similarity=0.203 Sum_probs=32.8
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKK 68 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~ 68 (543)
.++++++|+|+ |-+|+.++..|.+.|. ++|++..|.++
T Consensus 146 l~gk~~lVlGA-GGaaraia~~L~~~G~--~~v~v~nRt~~ 183 (312)
T 3t4e_A 146 MRGKTMVLLGA-GGAATAIGAQAAIEGI--KEIKLFNRKDD 183 (312)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEEECSST
T ss_pred cCCCEEEEECc-CHHHHHHHHHHHHcCC--CEEEEEECCCc
Confidence 46899999997 8899999999999864 58999999843
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=93.95 E-value=0.043 Score=47.50 Aligned_cols=35 Identities=20% Similarity=0.238 Sum_probs=29.8
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
.+++|+|.|+ |.+|+.+++.|.+.|. +|++..|..
T Consensus 20 ~~~~v~iiG~-G~iG~~~a~~l~~~g~---~v~v~~r~~ 54 (144)
T 3oj0_A 20 GGNKILLVGN-GMLASEIAPYFSYPQY---KVTVAGRNI 54 (144)
T ss_dssp CCCEEEEECC-SHHHHHHGGGCCTTTC---EEEEEESCH
T ss_pred cCCEEEEECC-CHHHHHHHHHHHhCCC---EEEEEcCCH
Confidence 4899999995 9999999999988764 488888864
|
| >2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=93.70 E-value=0.21 Score=49.88 Aligned_cols=34 Identities=12% Similarity=0.276 Sum_probs=28.1
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEe
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLM 64 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~ 64 (543)
++|.|.||||.+|+.|++.|+++++.+..++.+.
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~~ 34 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNFPLSELRLYA 34 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEee
Confidence 4799999999999999999997767666676553
|
| >3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A | Back alignment and structure |
|---|
Probab=93.61 E-value=0.21 Score=50.30 Aligned_cols=123 Identities=13% Similarity=0.115 Sum_probs=72.8
Q ss_pred hhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHH-----HHH---hcCchhHHHHhhcCcCC
Q psy7538 25 AKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRV-----EEL---FESPVFDALKTLRGKSI 96 (543)
Q Consensus 25 ~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl-----~~~---~~~~~f~~l~~~~~~~~ 96 (543)
++-+++++|+|.|+ |-+|+.+++.|.+.| |.+|.++++..-..+...|- +++ .-..+-++|+..+ |.
T Consensus 113 q~~L~~~~VlvvG~-GglGs~va~~La~aG--vg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~n-p~- 187 (353)
T 3h5n_A 113 QDKLKNAKVVILGC-GGIGNHVSVILATSG--IGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRN-SE- 187 (353)
T ss_dssp HHHHHTCEEEEECC-SHHHHHHHHHHHHHT--CSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHC-TT-
T ss_pred HHHHhCCeEEEECC-CHHHHHHHHHHHhCC--CCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHC-CC-
Confidence 67788999999996 679999999999996 47899988764221110000 000 0001122333333 32
Q ss_pred CCceEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecC
Q psy7538 97 LQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTA 175 (543)
Q Consensus 97 ~~~v~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~ 175 (543)
-+++.+..+++..+ ++.. ++++|+|+.+... +.+ .. ..+-++|.+. + +.+|+.+..
T Consensus 188 -v~v~~~~~~i~~~~------~~~~-~~~~DlVvd~~Dn--~~~-~r----------~~ln~~c~~~-~-~p~i~~~~~ 243 (353)
T 3h5n_A 188 -ISVSEIALNINDYT------DLHK-VPEADIWVVSADH--PFN-LI----------NWVNKYCVRA-N-QPYINAGYV 243 (353)
T ss_dssp -SEEEEEECCCCSGG------GGGG-SCCCSEEEECCCC--STT-HH----------HHHHHHHHHT-T-CCEEEEEEE
T ss_pred -CeEEEeecccCchh------hhhH-hccCCEEEEecCC--hHH-HH----------HHHHHHHHHh-C-CCEEEEEEe
Confidence 35777777776653 3445 7899999987532 111 11 2244678876 4 467766543
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=93.57 E-value=0.065 Score=54.00 Aligned_cols=37 Identities=19% Similarity=0.383 Sum_probs=32.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
-.|++|+|+||+|-+|...++.+...|. +|++..|+.
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga---~Vi~~~~~~ 202 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFGA---EVYATAGST 202 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESSH
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCC---EEEEEeCCH
Confidence 3578999999999999999999888875 789998864
|
| >3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans} | Back alignment and structure |
|---|
Probab=93.56 E-value=0.26 Score=50.10 Aligned_cols=42 Identities=24% Similarity=0.318 Sum_probs=30.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEE--ecCCCCCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLL--MRTKKGKT 71 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l--~R~~~~~~ 71 (543)
++.++|.|.||||++|..|++.|.+. |.+ +|..+ +++..|+.
T Consensus 17 M~~~kVaIvGAtG~vG~ell~lL~~h-p~~-el~~l~aS~~saGk~ 60 (381)
T 3hsk_A 17 MSVKKAGVLGATGSVGQRFILLLSKH-PEF-EIHALGASSRSAGKK 60 (381)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTC-SSE-EEEEEEECTTTTTSB
T ss_pred CCccEEEEECCCChHHHHHHHHHHcC-CCc-eEEEeeccccccCCC
Confidence 35578999999999999999966664 666 66544 35455543
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=93.52 E-value=0.095 Score=50.95 Aligned_cols=38 Identities=18% Similarity=0.277 Sum_probs=32.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKK 68 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~ 68 (543)
.++++++|+|+ |-+|+.++..|.+.|. ++|++..|...
T Consensus 115 l~~k~vlvlGa-Gg~g~aia~~L~~~G~--~~v~v~~R~~~ 152 (277)
T 3don_A 115 IEDAYILILGA-GGASKGIANELYKIVR--PTLTVANRTMS 152 (277)
T ss_dssp GGGCCEEEECC-SHHHHHHHHHHHTTCC--SCCEEECSCGG
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCC--CEEEEEeCCHH
Confidence 46899999996 8899999999999875 46888888753
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=93.47 E-value=0.12 Score=51.26 Aligned_cols=37 Identities=14% Similarity=0.152 Sum_probs=32.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
-.|++|+|+||+|-+|...++.+...|. +|++..|++
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga---~Vi~~~~~~ 175 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALGA---KLIGTVSSP 175 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTC---EEEEEESSH
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 4589999999999999999998888875 788888864
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=93.35 E-value=0.14 Score=51.87 Aligned_cols=34 Identities=12% Similarity=0.298 Sum_probs=30.5
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
|++|+|+|| |-+|..+++.+...|. +|++..|+.
T Consensus 181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga---~Vi~~~~~~ 214 (366)
T 2cdc_A 181 CRKVLVVGT-GPIGVLFTLLFRTYGL---EVWMANRRE 214 (366)
T ss_dssp TCEEEEESC-HHHHHHHHHHHHHHTC---EEEEEESSC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC---EEEEEeCCc
Confidence 899999999 9999999998888875 889998875
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=93.26 E-value=0.18 Score=50.41 Aligned_cols=38 Identities=13% Similarity=0.251 Sum_probs=32.8
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKK 68 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~ 68 (543)
-.|++|+|+||+|-+|...++.+...|. +|++..|+..
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga---~Vi~~~~~~~ 180 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILNF---RLIAVTRNNK 180 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTC---EEEEEESSST
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCC---EEEEEeCCHH
Confidence 4589999999999999999988888875 8899998764
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=93.24 E-value=0.15 Score=50.67 Aligned_cols=37 Identities=14% Similarity=0.151 Sum_probs=31.8
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
-.|++|+|+||+|-+|...++.+...|. +|++..|+.
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga---~Vi~~~~~~ 183 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGA---HTIAVASTD 183 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTC---EEEEEESSH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 4589999999999999999998888875 788888853
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=93.13 E-value=0.17 Score=50.74 Aligned_cols=37 Identities=16% Similarity=0.225 Sum_probs=31.8
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhh-CCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRL-EPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~-g~~v~~V~~l~R~~ 67 (543)
-.|++|+||||+|-+|..+++.+... |. +|++..|++
T Consensus 169 ~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga---~Vi~~~~~~ 206 (347)
T 1jvb_A 169 DPTKTLLVVGAGGGLGTMAVQIAKAVSGA---TIIGVDVRE 206 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTCC---EEEEEESSH
T ss_pred CCCCEEEEECCCccHHHHHHHHHHHcCCC---eEEEEcCCH
Confidence 36899999999999999999998888 75 788888763
|
| >3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=93.06 E-value=0.23 Score=48.08 Aligned_cols=35 Identities=17% Similarity=0.304 Sum_probs=30.0
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEec
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMR 65 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R 65 (543)
.+|++++|.|++|.+|+.++..|++.|. +|++..|
T Consensus 158 l~Gk~vvVvGrs~iVG~p~A~lL~~~gA---tVtv~h~ 192 (285)
T 3p2o_A 158 LEGKDAVIIGASNIVGRPMATMLLNAGA---TVSVCHI 192 (285)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTC---EEEEECT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---eEEEEeC
Confidence 5799999999999999999999999875 6666544
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=93.03 E-value=0.24 Score=49.90 Aligned_cols=37 Identities=11% Similarity=0.173 Sum_probs=31.7
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
-.|++|+|+||+|-+|...++.+...|. +|++..|+.
T Consensus 162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga---~Vi~~~~~~ 198 (362)
T 2c0c_A 162 SEGKKVLVTAAAGGTGQFAMQLSKKAKC---HVIGTCSSD 198 (362)
T ss_dssp CTTCEEEETTTTBTTHHHHHHHHHHTTC---EEEEEESSH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCC---EEEEEECCH
Confidence 4578999999999999999998888875 788888863
|
| >2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A | Back alignment and structure |
|---|
Probab=92.95 E-value=1.5 Score=42.93 Aligned_cols=108 Identities=15% Similarity=0.124 Sum_probs=67.9
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
.++|.|+|| |.+|..++..|+..|. +.+|.+.++.... .....++.. + .. +++.. .+|
T Consensus 14 ~~kV~ViGa-G~vG~~~a~~l~~~g~-~~ev~L~Di~~~~---~g~a~dl~~------~-----~~--~~i~~-t~d--- 71 (303)
T 2i6t_A 14 VNKITVVGG-GELGIACTLAISAKGI-ADRLVLLDLSEGT---KGATMDLEI------F-----NL--PNVEI-SKD--- 71 (303)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECCC--------CHHHHHH------H-----TC--TTEEE-ESC---
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEcCCcch---HHHHHHHhh------h-----cC--CCeEE-eCC---
Confidence 478999996 9999999999999985 5688888887531 111112110 0 11 24443 233
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEE
Q psy7538 110 LKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFT 170 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V 170 (543)
+ ..++++|+||-+|+.....+...+....|+.-.+.+.+.+.+. ....++
T Consensus 72 ---------~-~~l~~aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~-~p~a~i 121 (303)
T 2i6t_A 72 ---------L-SASAHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHY-SQHSVL 121 (303)
T ss_dssp ---------G-GGGTTCSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHH-TTTCEE
T ss_pred ---------H-HHHCCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEE
Confidence 2 3368999999999774333334556778888888888888875 344444
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=92.91 E-value=0.1 Score=51.20 Aligned_cols=37 Identities=8% Similarity=0.240 Sum_probs=31.9
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKK 68 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~ 68 (543)
.|++|+|+||+|-+|...++.+...|. +|++..|+..
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga---~Vi~~~~~~~ 161 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGL---RVLAAASRPE 161 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTC---EEEEEESSGG
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHH
Confidence 589999999999999999988887774 7899988653
|
| >1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* | Back alignment and structure |
|---|
Probab=92.77 E-value=0.58 Score=46.25 Aligned_cols=115 Identities=14% Similarity=0.141 Sum_probs=69.4
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
.++|.|+|+ |.+|..++..|+..+. +.+|++.++.. ++++... ..+.+. . +.....+.+..+|
T Consensus 6 ~~kI~IIGa-G~vG~sla~~l~~~~~-~~ev~l~Di~~------~~~~~~~-~dl~~~----~-~~~~~~~~i~~~~--- 68 (316)
T 1ldn_A 6 GARVVVIGA-GFVGASYVFALMNQGI-ADEIVLIDANE------SKAIGDA-MDFNHG----K-VFAPKPVDIWHGD--- 68 (316)
T ss_dssp SCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSH------HHHHHHH-HHHHHH----T-TSSSSCCEEEECC---
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCC-CCEEEEEeCCc------chHHHHH-hhHHHH----h-hhcCCCeEEEcCc---
Confidence 479999998 9999999999988763 45899998863 2222110 001111 1 1111133333221
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCccCCCc-ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEE
Q psy7538 110 LKLGISEIDKKELIDNVDIVYHVAATIRFD-EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYI 172 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~ViH~AA~v~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~v 172 (543)
. ..++++|+||-+|+..+-. ....+.+..|..-.+.+.+.+.+. ....++.+
T Consensus 69 ---------~-~al~~aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~~iv 121 (316)
T 1ldn_A 69 ---------Y-DDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMAS-GFQGLFLV 121 (316)
T ss_dssp ---------G-GGTTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHH-TCCSEEEE
T ss_pred ---------H-HHhCCCCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHH-CCCCEEEE
Confidence 1 2468999999998865422 222344677888888888888776 44444444
|
| >2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=92.61 E-value=0.75 Score=45.15 Aligned_cols=113 Identities=12% Similarity=0.159 Sum_probs=64.5
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|.|+|| |.+|..++..|...|+ +.+|.+.++.. ++++... ..+.... + ......+..+|
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~g~-~~eV~L~D~~~------~~~~~~~-----~~l~~~~-~-~~~~~~i~~~~---- 61 (304)
T 2v6b_A 1 MKVGVVGT-GFVGSTAAFALVLRGS-CSELVLVDRDE------DRAQAEA-----EDIAHAA-P-VSHGTRVWHGG---- 61 (304)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSH------HHHHHHH-----HHHTTSC-C-TTSCCEEEEEC----
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCCH------HHHHHHH-----Hhhhhhh-h-hcCCeEEEECC----
Confidence 58999998 9999999999998875 45788888863 3332110 0011000 1 11122222222
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEE
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYI 172 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~v 172 (543)
. ..++++|+||-+++...- .+...+....|+...+.+.+.+.+. .....+.+
T Consensus 62 --------~-~a~~~aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~~~vi~ 114 (304)
T 2v6b_A 62 --------H-SELADAQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRA-APDAVLLV 114 (304)
T ss_dssp --------G-GGGTTCSEEEECC------------CHHHHHHHHHHHHHHHHHH-CSSSEEEE
T ss_pred --------H-HHhCCCCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHh-CCCeEEEE
Confidence 1 246799999999975432 2333455678888888888888876 44554444
|
| >3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 | Back alignment and structure |
|---|
Probab=92.58 E-value=2.4 Score=42.01 Aligned_cols=118 Identities=14% Similarity=0.083 Sum_probs=73.3
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
..++|.|+|+ |.+|..++..|+..|. +.+|.++++.... .+....++.+...| + ...++. ..+|..
T Consensus 20 ~~~kV~ViGa-G~vG~~~a~~la~~g~-~~ev~L~Di~~~~--~~g~a~DL~~~~~~--------~-~~~~i~-~t~d~~ 85 (330)
T 3ldh_A 20 SYNKITVVGC-DAVGMADAISVLMKDL-ADEVALVDVMEDK--LKGEMMDLEHGSLF--------L-HTAKIV-SGKDYS 85 (330)
T ss_dssp CCCEEEEEST-THHHHHHHHHHHHHCC-CSEEEEECSCHHH--HHHHHHHHHHHGGG--------S-CCSEEE-EESSSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEECCHHH--HHHHHHHhhhhhhc--------c-cCCeEE-EcCCHH
Confidence 4579999998 9999999999998863 4578888874311 11111122111111 1 112222 233433
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEec
Q psy7538 109 QLKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIST 174 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 174 (543)
. ++++|+||-+|+..+- .+...+.+..|+.-.+.+.+.+.+. ....++.+=|
T Consensus 86 ------------~-~~daDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~-~P~a~ilvvt 138 (330)
T 3ldh_A 86 ------------V-SAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKH-SPDCLKELHP 138 (330)
T ss_dssp ------------S-CSSCSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHH-CTTCEEEECS
T ss_pred ------------H-hCCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh-CCCceEEeCC
Confidence 2 5799999999987643 2344467788998899999888887 4555444433
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=92.38 E-value=0.23 Score=46.12 Aligned_cols=35 Identities=20% Similarity=0.240 Sum_probs=28.8
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
.+|+|.|.| +|.+|+.+++.|.+.|+ +|++..|+.
T Consensus 27 ~~~~I~iiG-~G~~G~~la~~l~~~g~---~V~~~~r~~ 61 (215)
T 2vns_A 27 EAPKVGILG-SGDFARSLATRLVGSGF---KVVVGSRNP 61 (215)
T ss_dssp --CCEEEEC-CSHHHHHHHHHHHHTTC---CEEEEESSH
T ss_pred CCCEEEEEc-cCHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 357899999 89999999999999986 577788863
|
| >3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=92.38 E-value=0.24 Score=48.29 Aligned_cols=37 Identities=27% Similarity=0.421 Sum_probs=29.2
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
..+|.|.|++|-+|+.+++.+.+. +++.-|-+++|+.
T Consensus 21 ~irV~V~Ga~GrMGr~i~~~v~~~-~~~eLvg~vd~~~ 57 (288)
T 3ijp_A 21 SMRLTVVGANGRMGRELITAIQRR-KDVELCAVLVRKG 57 (288)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTC-SSEEEEEEBCCTT
T ss_pred CeEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecCC
Confidence 368999999999999999998876 6774455556653
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=92.31 E-value=0.21 Score=49.07 Aligned_cols=37 Identities=22% Similarity=0.272 Sum_probs=31.8
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
.++++|+|+|+ |-+|+.++..|++.|. .+|++..|..
T Consensus 139 l~~~~vlVlGa-Gg~g~aia~~L~~~G~--~~V~v~nR~~ 175 (297)
T 2egg_A 139 LDGKRILVIGA-GGGARGIYFSLLSTAA--ERIDMANRTV 175 (297)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTTC--SEEEEECSSH
T ss_pred CCCCEEEEECc-HHHHHHHHHHHHHCCC--CEEEEEeCCH
Confidence 46899999997 7799999999999874 5899999874
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=92.12 E-value=0.56 Score=44.56 Aligned_cols=34 Identities=9% Similarity=0.241 Sum_probs=26.1
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRT 66 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~ 66 (543)
++|.|.|++|-+|+.+++.+.+. ++. +|......
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~-~~~-elva~~d~ 34 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAA-DDL-TLSAELDA 34 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHC-TTC-EEEEEECT
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-CCC-EEEEEEcc
Confidence 57999999999999999998765 344 55555443
|
| >4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A | Back alignment and structure |
|---|
Probab=92.07 E-value=0.1 Score=54.01 Aligned_cols=82 Identities=17% Similarity=0.235 Sum_probs=51.0
Q ss_pred hhhccCcchhhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCc
Q psy7538 15 KELQALPDRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGK 94 (543)
Q Consensus 15 ~~~~~~~~~i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~ 94 (543)
+++...+......+.+++|+|.|+ |.+|+.+++.+.+.|. +|+++...+. .+..++
T Consensus 20 ~~~~~~~~~~~~~~~~~~IlIlG~-G~lg~~~~~aa~~lG~---~v~v~d~~~~--~p~~~~------------------ 75 (419)
T 4e4t_A 20 GSMTATPDSVSPILPGAWLGMVGG-GQLGRMFCFAAQSMGY---RVAVLDPDPA--SPAGAV------------------ 75 (419)
T ss_dssp ---------CCCCCTTCEEEEECC-SHHHHHHHHHHHHTTC---EEEEECSCTT--CHHHHH------------------
T ss_pred hhhccCccccccCCCCCEEEEECC-CHHHHHHHHHHHHCCC---EEEEECCCCc--Cchhhh------------------
Confidence 344443444344678999999995 8999999999999987 6777765432 222111
Q ss_pred CCCCceEEEEccCCCCCCCCCHHHHHHHhcCccEEE
Q psy7538 95 SILQKIQVISGDITQLKLGISEIDKKELIDNVDIVY 130 (543)
Q Consensus 95 ~~~~~v~~i~gDl~~~~lgls~~~~~~l~~~vd~Vi 130 (543)
.+ ..+.+|..|.+ .+..+++++|+|+
T Consensus 76 --ad--~~~~~~~~d~~------~l~~~a~~~D~V~ 101 (419)
T 4e4t_A 76 --AD--RHLRAAYDDEA------ALAELAGLCEAVS 101 (419)
T ss_dssp --SS--EEECCCTTCHH------HHHHHHHHCSEEE
T ss_pred --CC--EEEECCcCCHH------HHHHHHhcCCEEE
Confidence 11 24456766654 6778888899887
|
| >1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=92.05 E-value=1.1 Score=44.26 Aligned_cols=113 Identities=16% Similarity=0.117 Sum_probs=68.4
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|.|.|+ |.+|..++..|++.|+ ..+|.+.+|.. ++++.+.. .+.... + ......+...| .
T Consensus 1 mkI~VIGa-G~~G~~la~~l~~~g~-~~~V~l~D~~~------~~~~~~~~-----~l~~~~-~-~~~~~~i~~~d---~ 62 (319)
T 1a5z_A 1 MKIGIVGL-GRVGSSTAFALLMKGF-AREMVLIDVDK------KRAEGDAL-----DLIHGT-P-FTRRANIYAGD---Y 62 (319)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSH------HHHHHHHH-----HHHHHG-G-GSCCCEEEECC---G
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEeCCh------HHHHHHHH-----HHHhhh-h-hcCCcEEEeCC---H
Confidence 58999997 9999999999999986 45788888863 22322110 000000 1 00111222112 1
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCCCc-ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEE
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIRFD-EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYI 172 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~v 172 (543)
..++++|+||-+++..... ....+....|+...+.+++.+.+. .....+.+
T Consensus 63 ----------~~~~~aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~~~~~ii~ 114 (319)
T 1a5z_A 63 ----------ADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKY-APDSIVIV 114 (319)
T ss_dssp ----------GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEE
T ss_pred ----------HHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEE
Confidence 2357899999998865432 223456778888888888888775 33444333
|
| >3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=92.00 E-value=0.39 Score=46.52 Aligned_cols=35 Identities=20% Similarity=0.272 Sum_probs=29.8
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEec
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMR 65 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R 65 (543)
.+|++++|.|++|.+|+.++..|++.|. +|++..|
T Consensus 159 l~Gk~vvVIG~s~iVG~p~A~lL~~~gA---tVtv~hs 193 (285)
T 3l07_A 159 TEGAYAVVVGASNVVGKPVSQLLLNAKA---TVTTCHR 193 (285)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTC---EEEEECT
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCC---eEEEEeC
Confidence 5799999999999999999999999875 6666543
|
| >4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major} | Back alignment and structure |
|---|
Probab=91.91 E-value=0.41 Score=46.70 Aligned_cols=35 Identities=11% Similarity=0.264 Sum_probs=30.6
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEec
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMR 65 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R 65 (543)
.+|++++|.|++|.+|+.++..|++.|. +|++..|
T Consensus 163 l~Gk~vvVIG~s~iVG~p~A~lL~~~gA---tVtv~~~ 197 (300)
T 4a26_A 163 MAGKRAVVLGRSNIVGAPVAALLMKENA---TVTIVHS 197 (300)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTC---EEEEECT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---eEEEEeC
Confidence 5799999999999999999999999975 6776655
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=91.79 E-value=0.19 Score=50.36 Aligned_cols=34 Identities=21% Similarity=0.506 Sum_probs=29.0
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRT 66 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~ 66 (543)
.|++|+|+||+|-+|...++.+...|. +|++. ++
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga---~Vi~~-~~ 183 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALARGA---RVFAT-AR 183 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEE-EC
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC---EEEEE-eC
Confidence 578999999999999999998888875 77777 44
|
| >1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A* | Back alignment and structure |
|---|
Probab=91.69 E-value=0.19 Score=49.72 Aligned_cols=114 Identities=16% Similarity=0.104 Sum_probs=68.4
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHH-HHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVE-ELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~-~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
|+|.|.|| |.+|..++..|.+.+. ..+|.+.+|.+.. .+.+. ++.+. .. .. ....++... .|
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~~~-g~~V~l~D~~~~~---~~~~~~~l~~~-~~----~~---~~~~~i~~t-~d--- 63 (310)
T 1guz_A 1 MKITVIGA-GNVGATTAFRLAEKQL-ARELVLLDVVEGI---PQGKALDMYES-GP----VG---LFDTKVTGS-ND--- 63 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSSSH---HHHHHHHHHTT-HH----HH---TCCCEEEEE-SC---
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCChhH---HHHHHHhHHhh-hh----cc---cCCcEEEEC-CC---
Confidence 58999998 9999999999888532 2389999987531 11221 11111 00 00 011122211 12
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEE
Q psy7538 110 LKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYI 172 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~v 172 (543)
++. ++++|+||-+++.... .....+....|+.-.+.+.+.+.+. .....+.+
T Consensus 64 ---------~~~-l~~aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~~~~~viv 116 (310)
T 1guz_A 64 ---------YAD-TANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKH-SKNPIIIV 116 (310)
T ss_dssp ---------GGG-GTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CSSCEEEE
T ss_pred ---------HHH-HCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEE
Confidence 223 6899999999876543 3334567788988888888888776 33444333
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=91.64 E-value=0.22 Score=52.13 Aligned_cols=71 Identities=20% Similarity=0.369 Sum_probs=52.1
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
..|+|+|.|+ |-+|++|++.|.+.|+ .|.++.+.+ ++++.+ .++ -.+..+.||-+
T Consensus 2 ~~M~iiI~G~-G~vG~~la~~L~~~~~---~v~vId~d~------~~~~~~---------~~~------~~~~~i~Gd~~ 56 (461)
T 4g65_A 2 NAMKIIILGA-GQVGGTLAENLVGENN---DITIVDKDG------DRLREL---------QDK------YDLRVVNGHAS 56 (461)
T ss_dssp CCEEEEEECC-SHHHHHHHHHTCSTTE---EEEEEESCH------HHHHHH---------HHH------SSCEEEESCTT
T ss_pred CcCEEEEECC-CHHHHHHHHHHHHCCC---CEEEEECCH------HHHHHH---------HHh------cCcEEEEEcCC
Confidence 4689999995 9999999999999987 677777653 344332 111 14678999999
Q ss_pred CCCCCCCHHHHHHH-hcCccEEE
Q psy7538 109 QLKLGISEIDKKEL-IDNVDIVY 130 (543)
Q Consensus 109 ~~~lgls~~~~~~l-~~~vd~Vi 130 (543)
+++ -++++ ++++|+++
T Consensus 57 ~~~------~L~~Agi~~ad~~i 73 (461)
T 4g65_A 57 HPD------VLHEAGAQDADMLV 73 (461)
T ss_dssp CHH------HHHHHTTTTCSEEE
T ss_pred CHH------HHHhcCCCcCCEEE
Confidence 886 46554 57899987
|
| >4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=91.58 E-value=0.42 Score=46.28 Aligned_cols=35 Identities=14% Similarity=0.181 Sum_probs=29.7
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEec
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMR 65 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R 65 (543)
.+|++++|.|++|.+|+.++..|++.|. +|++..+
T Consensus 159 l~Gk~vvVvGrs~iVG~plA~lL~~~gA---tVtv~hs 193 (286)
T 4a5o_A 159 LYGMDAVVVGASNIVGRPMALELLLGGC---TVTVTHR 193 (286)
T ss_dssp CTTCEEEEECTTSTTHHHHHHHHHHTTC---EEEEECT
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCC---eEEEEeC
Confidence 4799999999999999999999999875 6665543
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=91.38 E-value=0.45 Score=47.98 Aligned_cols=77 Identities=12% Similarity=0.246 Sum_probs=51.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
.++++|+|+|+ |-+|+.+++.+...|. +|++..|+. +|++.+.+ .. . ..+..+.
T Consensus 165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga---~V~v~dr~~------~r~~~~~~---------~~-~---~~~~~~~--- 218 (361)
T 1pjc_A 165 VKPGKVVILGG-GVVGTEAAKMAVGLGA---QVQIFDINV------ERLSYLET---------LF-G---SRVELLY--- 218 (361)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHHH---------HH-G---GGSEEEE---
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCC---EEEEEeCCH------HHHHHHHH---------hh-C---ceeEeee---
Confidence 45689999998 9999999999999875 789998864 33332210 00 0 1111111
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCccC
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAATI 136 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~v 136 (543)
. +.+++.+.+.++|+||++++..
T Consensus 219 ~------~~~~~~~~~~~~DvVI~~~~~~ 241 (361)
T 1pjc_A 219 S------NSAEIETAVAEADLLIGAVLVP 241 (361)
T ss_dssp C------CHHHHHHHHHTCSEEEECCCCT
T ss_pred C------CHHHHHHHHcCCCEEEECCCcC
Confidence 1 1235667778999999998753
|
| >3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A | Back alignment and structure |
|---|
Probab=91.21 E-value=0.39 Score=46.25 Aligned_cols=35 Identities=14% Similarity=0.241 Sum_probs=30.4
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEec
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMR 65 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R 65 (543)
.+|++++|.|++|.+|+.++..|++.|. +|++..|
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gA---tVtv~~~ 182 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNY---TVSVCHS 182 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTC---EEEEECT
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCC---eEEEEeC
Confidence 6899999999999999999999999975 6666543
|
| >1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=91.13 E-value=2.5 Score=41.33 Aligned_cols=114 Identities=9% Similarity=0.097 Sum_probs=65.4
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|.|.| +|.+|..++..|.+.|. ..+|.+..|.. ++++.+.. .+.... ......+.....|
T Consensus 2 ~kI~VIG-aG~~G~~la~~L~~~g~-~~~V~l~d~~~------~~~~~~~~-----~l~~~~-~~~~~~~~~~~~d---- 63 (309)
T 1hyh_A 2 RKIGIIG-LGNVGAAVAHGLIAQGV-ADDYVFIDANE------AKVKADQI-----DFQDAM-ANLEAHGNIVIND---- 63 (309)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTC-CSEEEEECSSH------HHHHHHHH-----HHHHHG-GGSSSCCEEEESC----
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCC-CCEEEEEcCCH------HHHHHHHH-----HHHhhh-hhcCCCeEEEeCC----
Confidence 6899999 79999999999999973 24888888863 33322210 000000 0011123332222
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCC-----CcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEE
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIR-----FDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYI 172 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~-----~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~v 172 (543)
. ..++++|+||-++.... ......+....|+.-.+.+++.+.+. .....|.+
T Consensus 64 --------~-~~~~~aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~-~~~~~ii~ 120 (309)
T 1hyh_A 64 --------W-AALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKES-GFHGVLVV 120 (309)
T ss_dssp --------G-GGGTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHT-TCCSEEEE
T ss_pred --------H-HHhCCCCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEE
Confidence 2 34578999999887533 11111234567777778888877765 33444433
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=91.09 E-value=0.36 Score=48.32 Aligned_cols=36 Identities=17% Similarity=0.236 Sum_probs=30.9
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKK 68 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~ 68 (543)
+++|+|+||+|-+|...++.+...|. +|++..|+..
T Consensus 165 ~~~vli~gg~g~vG~~a~qla~~~Ga---~Vi~~~~~~~ 200 (349)
T 3pi7_A 165 EKAFVMTAGASQLCKLIIGLAKEEGF---RPIVTVRRDE 200 (349)
T ss_dssp CSEEEESSTTSHHHHHHHHHHHHHTC---EEEEEESCGG
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHH
Confidence 38999999999999999988888875 8888888653
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=90.98 E-value=0.19 Score=50.24 Aligned_cols=36 Identities=14% Similarity=0.100 Sum_probs=29.9
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
-.|++|+|+|| |-+|..+++.+...|. +|++..|+.
T Consensus 163 ~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga---~Vi~~~~~~ 198 (339)
T 1rjw_A 163 KPGEWVAIYGI-GGLGHVAVQYAKAMGL---NVVAVDIGD 198 (339)
T ss_dssp CTTCEEEEECC-STTHHHHHHHHHHTTC---EEEEECSCH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCC---EEEEEeCCH
Confidence 45899999999 6699999988888774 888888763
|
| >1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8 | Back alignment and structure |
|---|
Probab=90.92 E-value=1.1 Score=38.31 Aligned_cols=38 Identities=18% Similarity=0.296 Sum_probs=29.4
Q ss_pred hhcCCCEEEEEcCc---chhHHHHHHHHHhhCCCcCEEEEEecC
Q psy7538 26 KTYENKSIFLSGGS---GFLGKVLIEKILRLEPNVKKIYLLMRT 66 (543)
Q Consensus 26 ~~~~~~~VlITGat---GFiG~~Lv~~Ll~~g~~v~~V~~l~R~ 66 (543)
.+++.++|.|.|+| |-+|..+++.|++.|+ +|+...+.
T Consensus 10 ~l~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~---~V~~vnp~ 50 (138)
T 1y81_A 10 NSKEFRKIALVGASKNPAKYGNIILKDLLSKGF---EVLPVNPN 50 (138)
T ss_dssp ----CCEEEEETCCSCTTSHHHHHHHHHHHTTC---EEEEECTT
T ss_pred cccCCCeEEEEeecCCCCCHHHHHHHHHHHCCC---EEEEeCCC
Confidence 46788999999997 8999999999999987 57776554
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.61 E-value=0.74 Score=46.49 Aligned_cols=35 Identities=17% Similarity=0.326 Sum_probs=29.0
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEec
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMR 65 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R 65 (543)
-.|.+|+|+||+|-+|...++.+...|. +|++..+
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga---~Vi~~~~ 216 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWDA---HVTAVCS 216 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEEC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCC---EEEEEeC
Confidence 3578999999999999999888877764 7777764
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=90.56 E-value=0.52 Score=49.25 Aligned_cols=95 Identities=31% Similarity=0.417 Sum_probs=61.2
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
-++|+|.|| |-+|..|++.|-+. + +|.++.+.+ +|.+.+ ....++..++.||-++
T Consensus 235 ~~~v~I~Gg-G~ig~~lA~~L~~~-~---~v~iIE~d~------~r~~~l--------------a~~l~~~~Vi~GD~td 289 (461)
T 4g65_A 235 YRRIMIVGG-GNIGASLAKRLEQT-Y---SVKLIERNL------QRAEKL--------------SEELENTIVFCGDAAD 289 (461)
T ss_dssp CCEEEEECC-SHHHHHHHHHHTTT-S---EEEEEESCH------HHHHHH--------------HHHCTTSEEEESCTTC
T ss_pred ccEEEEEcc-hHHHHHHHHHhhhc-C---ceEEEecCH------HHHHHH--------------HHHCCCceEEeccccc
Confidence 468999995 89999999987543 4 676776653 444333 1223567899999999
Q ss_pred CCCCCCHHHHHH-HhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEE
Q psy7538 110 LKLGISEIDKKE-LIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFT 170 (543)
Q Consensus 110 ~~lgls~~~~~~-l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V 170 (543)
+++ +.+ =++++|+++-+ +-+ + ++|+..+ -+|+++ ++++.|
T Consensus 290 ~~~------L~ee~i~~~D~~ia~--T~~-D-------e~Ni~~~----llAk~~-gv~kvI 330 (461)
T 4g65_A 290 QEL------LTEENIDQVDVFIAL--TNE-D-------ETNIMSA----MLAKRM-GAKKVM 330 (461)
T ss_dssp HHH------HHHTTGGGCSEEEEC--CSC-H-------HHHHHHH----HHHHHT-TCSEEE
T ss_pred hhh------HhhcCchhhcEEEEc--ccC-c-------HHHHHHH----HHHHHc-CCcccc
Confidence 763 333 35679999833 211 2 3454433 367887 777765
|
| >1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A* | Back alignment and structure |
|---|
Probab=90.14 E-value=1.1 Score=44.77 Aligned_cols=117 Identities=15% Similarity=0.167 Sum_probs=70.1
Q ss_pred hhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCH-------------HHHHHHHhcCchhHHHHh
Q psy7538 24 IAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTP-------------NQRVEELFESPVFDALKT 90 (543)
Q Consensus 24 i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~-------------~~rl~~~~~~~~f~~l~~ 90 (543)
-++-+++.+|+|.|+ |-+|+.+++.|.+.| |++|.+++...-..+- ..|.+. +-++|++
T Consensus 30 ~q~~L~~~~VlivG~-GGlG~~ia~~La~~G--vg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~-----~~~~l~~ 101 (346)
T 1y8q_A 30 AQKRLRASRVLLVGL-KGLGAEIAKNLILAG--VKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEA-----SLERAQN 101 (346)
T ss_dssp HHHHHHTCEEEEECC-SHHHHHHHHHHHHHT--CSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHH-----HHHHHHH
T ss_pred HHHHHhCCeEEEECC-CHHHHHHHHHHHHcC--CCEEEEEECCCcchhhCCCCCccccccCcCCHHHH-----HHHHHHh
Confidence 345577899999995 679999999999996 5688888543211000 001111 1223333
Q ss_pred hcCcCCCCceEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEE
Q psy7538 91 LRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFT 170 (543)
Q Consensus 91 ~~~~~~~~~v~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V 170 (543)
.+ |. -++..+..++++. ...++++.|+||.+... ... -..+-++|++. + ..||
T Consensus 102 ln-p~--v~v~~~~~~~~~~--------~~~~~~~~dvVv~~~d~------~~~--------r~~ln~~~~~~-~-ip~i 154 (346)
T 1y8q_A 102 LN-PM--VDVKVDTEDIEKK--------PESFFTQFDAVCLTCCS------RDV--------IVKVDQICHKN-S-IKFF 154 (346)
T ss_dssp TC-TT--SEEEEECSCGGGC--------CHHHHTTCSEEEEESCC------HHH--------HHHHHHHHHHT-T-CEEE
T ss_pred HC-CC--eEEEEEecccCcc--------hHHHhcCCCEEEEcCCC------HHH--------HHHHHHHHHHc-C-CCEE
Confidence 33 32 3566776666541 24567899999976422 211 13456778876 4 5677
Q ss_pred EEecC
Q psy7538 171 YISTA 175 (543)
Q Consensus 171 ~vST~ 175 (543)
+.++.
T Consensus 155 ~~~~~ 159 (346)
T 1y8q_A 155 TGDVF 159 (346)
T ss_dssp EEEEE
T ss_pred EEeec
Confidence 77665
|
| >3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=90.04 E-value=0.36 Score=45.80 Aligned_cols=36 Identities=14% Similarity=0.139 Sum_probs=26.9
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
+.++|.|.|+ |.+|+.+++.+.+.+ + .-|-++.|+.
T Consensus 2 ~MmkI~ViGa-GrMG~~i~~~l~~~~-~-eLva~~d~~~ 37 (243)
T 3qy9_A 2 ASMKILLIGY-GAMNQRVARLAEEKG-H-EIVGVIENTP 37 (243)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHTT-C-EEEEEECSSC
T ss_pred CceEEEEECc-CHHHHHHHHHHHhCC-C-EEEEEEecCc
Confidence 3589999999 999999999998874 4 2334455554
|
| >3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A | Back alignment and structure |
|---|
Probab=89.97 E-value=0.55 Score=47.57 Aligned_cols=70 Identities=17% Similarity=0.251 Sum_probs=49.4
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
.+.+++|+|.| .|.+|+.+++.+.+.|. +|+++...+.... ....+ ..+.+|
T Consensus 9 ~~~~~~IlIlG-~G~lg~~la~aa~~lG~---~viv~d~~~~~p~----------------------~~~ad--~~~~~~ 60 (377)
T 3orq_A 9 LKFGATIGIIG-GGQLGKMMAQSAQKMGY---KVVVLDPSEDCPC----------------------RYVAH--EFIQAK 60 (377)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHHTTC---EEEEEESCTTCTT----------------------GGGSS--EEEECC
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHCCC---EEEEEECCCCChh----------------------hhhCC--EEEECC
Confidence 34689999999 48899999999999987 7788876543211 01111 355677
Q ss_pred CCCCCCCCCHHHHHHHhcCccEEE
Q psy7538 107 ITQLKLGISEIDKKELIDNVDIVY 130 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~~vd~Vi 130 (543)
..|.+ .+..+++.+|+|.
T Consensus 61 ~~d~~------~l~~~~~~~dvi~ 78 (377)
T 3orq_A 61 YDDEK------ALNQLGQKCDVIT 78 (377)
T ss_dssp TTCHH------HHHHHHHHCSEEE
T ss_pred CCCHH------HHHHHHHhCCcce
Confidence 77654 6888888899874
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=89.94 E-value=0.74 Score=46.72 Aligned_cols=77 Identities=12% Similarity=0.139 Sum_probs=50.9
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
..+++|+|+|+ |-+|+.+++.+...|. +|++..|+. +|++.+. +. ....+.. +.
T Consensus 166 l~g~~V~ViG~-G~iG~~~a~~a~~~Ga---~V~~~d~~~------~~l~~~~---------~~----~g~~~~~---~~ 219 (377)
T 2vhw_A 166 VEPADVVVIGA-GTAGYNAARIANGMGA---TVTVLDINI------DKLRQLD---------AE----FCGRIHT---RY 219 (377)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH---------HH----TTTSSEE---EE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCC---EEEEEeCCH------HHHHHHH---------Hh----cCCeeEe---cc
Confidence 57899999998 9999999999998875 788888864 2332210 00 0011111 11
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCccC
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAATI 136 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~v 136 (543)
.+ .+++.+++.++|+||.+++..
T Consensus 220 ~~------~~~l~~~l~~aDvVi~~~~~p 242 (377)
T 2vhw_A 220 SS------AYELEGAVKRADLVIGAVLVP 242 (377)
T ss_dssp CC------HHHHHHHHHHCSEEEECCCCT
T ss_pred CC------HHHHHHHHcCCCEEEECCCcC
Confidence 11 236777788999999987643
|
| >2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=89.93 E-value=1.6 Score=42.92 Aligned_cols=111 Identities=18% Similarity=0.127 Sum_probs=67.8
Q ss_pred EEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCCC
Q psy7538 32 SIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQLK 111 (543)
Q Consensus 32 ~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~~ 111 (543)
+|.|+|| |.+|..++..|+..+. .+|.++++..... +.-..++.+...+ . ....++... +|
T Consensus 1 KI~IiGa-G~vG~~~a~~l~~~~l--~el~L~Di~~~~~--~g~~~dl~~~~~~-----~---~~~~~i~~t-~d----- 61 (308)
T 2d4a_B 1 MITILGA-GKVGMATAVMLMMRGY--DDLLLIARTPGKP--QGEALDLAHAAAE-----L---GVDIRISGS-NS----- 61 (308)
T ss_dssp CEEEECC-SHHHHHHHHHHHHHTC--SCEEEECSSTTHH--HHHHHHHHHHHHH-----H---TCCCCEEEE-SC-----
T ss_pred CEEEECc-CHHHHHHHHHHHhCCC--CEEEEEcCChhhH--HHHHHHHHHhhhh-----c---CCCeEEEEC-CC-----
Confidence 5889998 9999999999988754 5688888864211 1111121110000 0 001122221 23
Q ss_pred CCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEE
Q psy7538 112 LGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFT 170 (543)
Q Consensus 112 lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V 170 (543)
. ..++++|+||-+|+..+- .....+....|+.-.+.+.+.+.+. .....+
T Consensus 62 -------~-~a~~~aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~i 112 (308)
T 2d4a_B 62 -------Y-EDMRGSDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAY-AKDAIV 112 (308)
T ss_dssp -------G-GGGTTCSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHH-CTTCEE
T ss_pred -------H-HHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHH-CCCeEE
Confidence 2 246899999999887542 2334566888999999999988875 344433
|
| >1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* | Back alignment and structure |
|---|
Probab=89.83 E-value=1.2 Score=44.12 Aligned_cols=115 Identities=15% Similarity=0.086 Sum_probs=66.7
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
.++|.|+|| |.+|..++..|...|. + .|.+.++.... .+.....++..... . ....++... .|
T Consensus 4 ~~kI~VIGa-G~vG~~ia~~la~~g~-~-~v~L~Di~~~~---l~~~~~~l~~~~~~-----~--~~~~~i~~t-~d--- 66 (322)
T 1t2d_A 4 KAKIVLVGS-GMIGGVMATLIVQKNL-G-DVVLFDIVKNM---PHGKALDTSHTNVM-----A--YSNCKVSGS-NT--- 66 (322)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTC-C-EEEEECSSSSH---HHHHHHHHHTHHHH-----H--TCCCCEEEE-CC---
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-C-eEEEEeCCHHH---HHHHHHHHHhhhhh-----c--CCCcEEEEC-CC---
Confidence 368999998 9999999999998865 2 47777776421 12211111111110 0 011233221 22
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCccCCC-ccc-----HHHHHHHHHHHHHHHHHHHHhccCCceEEEE
Q psy7538 110 LKLGISEIDKKELIDNVDIVYHVAATIRF-DEP-----IKTAVILNTRGTRDMLELSKQMKNLKCFTYI 172 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~-----~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~v 172 (543)
+ ..++++|+||-+++...- ... ..+....|+.-.+.+.+.+.+. ....++.+
T Consensus 67 ---------~-~al~~aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv 124 (322)
T 1t2d_A 67 ---------Y-DDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKN-CPNAFIIV 124 (322)
T ss_dssp ---------G-GGGTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTSEEEE
T ss_pred ---------H-HHhCCCCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEE
Confidence 3 346899999999976532 211 2344667777778888777775 34444433
|
| >1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T* | Back alignment and structure |
|---|
Probab=89.74 E-value=2.2 Score=41.82 Aligned_cols=114 Identities=13% Similarity=0.146 Sum_probs=67.7
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHH-HhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEE-LFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~-~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
.|+|.|.|| |.+|..++..|.+.|+ +.+|.++.|+. ++++. ..+ +.... + ......+... +
T Consensus 7 ~mkI~IiGa-G~vG~~~a~~l~~~g~-~~~V~l~d~~~------~~~~~~~~~------~~~~~-~-~~~~~~v~~~--~ 68 (319)
T 1lld_A 7 PTKLAVIGA-GAVGSTLAFAAAQRGI-AREIVLEDIAK------ERVEAEVLD------MQHGS-S-FYPTVSIDGS--D 68 (319)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSH------HHHHHHHHH------HHHTG-G-GSTTCEEEEE--S
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCCh------hHHHHHHHH------HHhhh-h-hcCCeEEEeC--C
Confidence 479999997 9999999999999875 34788888863 22221 000 00000 0 0011222211 0
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEE
Q psy7538 109 QLKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYI 172 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~v 172 (543)
+ . ..++++|+||-++..... .+...+....|+...+.+++...+. ....+|.+
T Consensus 69 ~---------~-~~~~~aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~ 122 (319)
T 1lld_A 69 D---------P-EICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYML 122 (319)
T ss_dssp C---------G-GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEE
T ss_pred C---------H-HHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEE
Confidence 1 1 235789999999875432 2344566778888888888877765 34444433
|
| >3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium} | Back alignment and structure |
|---|
Probab=89.73 E-value=0.72 Score=43.09 Aligned_cols=68 Identities=18% Similarity=0.267 Sum_probs=47.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++|++|+|.|| |-+|...++.|++.|. +|+++.... .+.++++.+ ..++.++.++.
T Consensus 29 L~gk~VLVVGg-G~va~~ka~~Ll~~GA---~VtVvap~~-----~~~l~~l~~---------------~~~i~~i~~~~ 84 (223)
T 3dfz_A 29 LKGRSVLVVGG-GTIATRRIKGFLQEGA---AITVVAPTV-----SAEINEWEA---------------KGQLRVKRKKV 84 (223)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHGGGCC---CEEEECSSC-----CHHHHHHHH---------------TTSCEEECSCC
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCC---EEEEECCCC-----CHHHHHHHH---------------cCCcEEEECCC
Confidence 57899999995 8999999999999987 566666532 122333211 13577777766
Q ss_pred CCCCCCCCHHHHHHHhcCccEEE
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVY 130 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~Vi 130 (543)
...+ ++++|.||
T Consensus 85 ~~~d-----------L~~adLVI 96 (223)
T 3dfz_A 85 GEED-----------LLNVFFIV 96 (223)
T ss_dssp CGGG-----------SSSCSEEE
T ss_pred CHhH-----------hCCCCEEE
Confidence 5433 36899998
|
| >1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1 | Back alignment and structure |
|---|
Probab=89.61 E-value=2.6 Score=40.94 Aligned_cols=27 Identities=15% Similarity=0.329 Sum_probs=24.4
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEP 55 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~ 55 (543)
+.++|+|.|+||-+|+.+++.+++.|+
T Consensus 6 ~~~~VaVvGasG~~G~~~~~~l~~~g~ 32 (288)
T 1oi7_A 6 RETRVLVQGITGREGQFHTKQMLTYGT 32 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTC
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHcCC
Confidence 467899999999999999999999875
|
| >3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* | Back alignment and structure |
|---|
Probab=89.56 E-value=0.37 Score=42.31 Aligned_cols=72 Identities=14% Similarity=0.125 Sum_probs=44.6
Q ss_pred chhHHHHHHHHHhhCCCcCEEEEEecCCCCCC----HHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCCCCCCC
Q psy7538 40 GFLGKVLIEKILRLEPNVKKIYLLMRTKKGKT----PNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQLKLGIS 115 (543)
Q Consensus 40 GFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~----~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~~lgls 115 (543)
|.++...++.|.+.|. +|.+..|+..... ..+.++ ....+...+.+|++++.
T Consensus 26 ~~p~~a~a~~La~~Ga---~vvi~~r~~~e~~~~~~~~~~~~-----------------~~G~~~~~i~~Dv~~~~---- 81 (157)
T 3gxh_A 26 GLPNEQQFSLLKQAGV---DVVINLMPDSSKDAHPDEGKLVT-----------------QAGMDYVYIPVDWQNPK---- 81 (157)
T ss_dssp BCCCHHHHHHHHHTTC---CEEEECSCTTSTTSCTTHHHHHH-----------------HTTCEEEECCCCTTSCC----
T ss_pred CCCCHHHHHHHHHcCC---CEEEECCCcccccccccHHHHHH-----------------HcCCeEEEecCCCCCCC----
Confidence 5788999999999986 5555566543221 111111 11235677888998872
Q ss_pred HHHHHHHhc------CccEEEEcCcc
Q psy7538 116 EIDKKELID------NVDIVYHVAAT 135 (543)
Q Consensus 116 ~~~~~~l~~------~vd~ViH~AA~ 135 (543)
+++++.+++ +-|+++||||.
T Consensus 82 ~~~v~~~~~~i~~~~G~dVLVnnAgg 107 (157)
T 3gxh_A 82 VEDVEAFFAAMDQHKGKDVLVHCLAN 107 (157)
T ss_dssp HHHHHHHHHHHHHTTTSCEEEECSBS
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 235554432 23999999985
|
| >2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=89.52 E-value=1.4 Score=43.81 Aligned_cols=112 Identities=16% Similarity=0.124 Sum_probs=64.9
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
++|.|.|| |.+|..++..|...|+ + .|.+.++.... .+....-++ +.+.. . ....++... .|
T Consensus 15 ~kI~ViGa-G~vG~~iA~~la~~g~-~-~V~L~Di~~~~---l~~~~~~l~----~~~~~-~--~~~~~i~~t-~d---- 76 (328)
T 2hjr_A 15 KKISIIGA-GQIGSTIALLLGQKDL-G-DVYMFDIIEGV---PQGKALDLN----HCMAL-I--GSPAKIFGE-NN---- 76 (328)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-C-EEEEECSSTTH---HHHHHHHHH----HHHHH-H--TCCCCEEEE-SC----
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-C-eEEEEECCHHH---HHHHHHHHH----hHhhc-c--CCCCEEEEC-CC----
Confidence 68999998 9999999999888875 2 58888886432 111110000 00100 0 011233321 22
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCC-CcccHHHHHHHHHHHHHHHHHHHHhccCCceEE
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIR-FDEPIKTAVILNTRGTRDMLELSKQMKNLKCFT 170 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V 170 (543)
+ ..++++|+||-+++... ......+....|+.-.+.+.+.+.+. ....++
T Consensus 77 --------~-~al~~aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~-~p~a~v 127 (328)
T 2hjr_A 77 --------Y-EYLQNSDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKY-CPNAFV 127 (328)
T ss_dssp --------G-GGGTTCSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHH-CTTCEE
T ss_pred --------H-HHHCCCCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHH-CCCeEE
Confidence 3 34689999999987543 22222234566777778888877765 334443
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=89.48 E-value=0.52 Score=47.32 Aligned_cols=38 Identities=16% Similarity=0.186 Sum_probs=31.6
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKG 69 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~ 69 (543)
-.|.+|+|+|| |-+|...++.+...|. +|++..|++..
T Consensus 178 ~~g~~VlV~Ga-G~vG~~~~qlak~~Ga---~Vi~~~~~~~~ 215 (360)
T 1piw_A 178 GPGKKVGIVGL-GGIGSMGTLISKAMGA---ETYVISRSSRK 215 (360)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHHTC---EEEEEESSSTT
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCC---EEEEEcCCHHH
Confidence 35889999999 9999999988877775 78999987643
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=89.33 E-value=0.87 Score=45.17 Aligned_cols=70 Identities=13% Similarity=0.117 Sum_probs=50.3
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
.++|+|.|+ |-+|+.+++.|.+.|+ |.++.+++ ++++ + + ..++.++.||.++
T Consensus 115 ~~~viI~G~-G~~g~~l~~~L~~~g~----v~vid~~~------~~~~-~---------~-------~~~~~~i~gd~~~ 166 (336)
T 1lnq_A 115 SRHVVICGW-SESTLECLRELRGSEV----FVLAEDEN------VRKK-V---------L-------RSGANFVHGDPTR 166 (336)
T ss_dssp -CEEEEESC-CHHHHHHHTTGGGSCE----EEEESCGG------GHHH-H---------H-------HTTCEEEESCTTS
T ss_pred cCCEEEECC-cHHHHHHHHHHHhCCc----EEEEeCCh------hhhh-H---------H-------hCCcEEEEeCCCC
Confidence 458999996 9999999999998863 55555543 2332 1 1 1367899999998
Q ss_pred CCCCCCHHHHHHH-hcCccEEEEcC
Q psy7538 110 LKLGISEIDKKEL-IDNVDIVYHVA 133 (543)
Q Consensus 110 ~~lgls~~~~~~l-~~~vd~ViH~A 133 (543)
++ .++++ ++++|.|+-+.
T Consensus 167 ~~------~L~~a~i~~a~~vi~~~ 185 (336)
T 1lnq_A 167 VS------DLEKANVRGARAVIVDL 185 (336)
T ss_dssp HH------HHHHTCSTTEEEEEECC
T ss_pred HH------HHHhcChhhccEEEEcC
Confidence 75 67766 77899998654
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=89.20 E-value=0.62 Score=48.32 Aligned_cols=37 Identities=16% Similarity=0.150 Sum_probs=30.8
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecC
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRT 66 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~ 66 (543)
.-.|++|+|+||+|-+|...++.+...|. +|++.+++
T Consensus 218 ~~~g~~VlV~GasG~iG~~a~qla~~~Ga---~vi~~~~~ 254 (447)
T 4a0s_A 218 MKQGDIVLIWGASGGLGSYAIQFVKNGGG---IPVAVVSS 254 (447)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCC---EEEEEeCC
Confidence 34579999999999999999988888775 77777764
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=89.10 E-value=0.53 Score=46.45 Aligned_cols=37 Identities=11% Similarity=0.226 Sum_probs=30.5
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecC
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRT 66 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~ 66 (543)
.-.|.+|+|+||+|-+|...++-+...|. +|++..++
T Consensus 150 ~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga---~vi~~~~~ 186 (321)
T 3tqh_A 150 VKQGDVVLIHAGAGGVGHLAIQLAKQKGT---TVITTASK 186 (321)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEECH
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHcCC---EEEEEecc
Confidence 34689999999999999999988887775 67777653
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=88.93 E-value=0.47 Score=45.33 Aligned_cols=36 Identities=22% Similarity=0.422 Sum_probs=30.8
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
.++ +|+|.|+ |-+|+.++..|++.|. ++|++..|+.
T Consensus 107 ~~~-~vliiGa-Gg~a~ai~~~L~~~G~--~~I~v~nR~~ 142 (253)
T 3u62_A 107 VKE-PVVVVGA-GGAARAVIYALLQMGV--KDIWVVNRTI 142 (253)
T ss_dssp CCS-SEEEECC-SHHHHHHHHHHHHTTC--CCEEEEESCH
T ss_pred CCC-eEEEECc-HHHHHHHHHHHHHcCC--CEEEEEeCCH
Confidence 367 9999996 8899999999999875 5799999974
|
| >3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae} | Back alignment and structure |
|---|
Probab=88.92 E-value=2.5 Score=43.88 Aligned_cols=87 Identities=18% Similarity=0.226 Sum_probs=54.5
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+|.|. |-.|..+++.|.+.|+ +|.+.++....... ..+.|+. .++.+..|.-
T Consensus 7 ~~~k~v~viG~-G~sG~s~A~~l~~~G~---~V~~~D~~~~~~~~-----------~~~~L~~-------~gi~~~~g~~ 64 (451)
T 3lk7_A 7 FENKKVLVLGL-ARSGEAAARLLAKLGA---IVTVNDGKPFDENP-----------TAQSLLE-------EGIKVVCGSH 64 (451)
T ss_dssp TTTCEEEEECC-TTTHHHHHHHHHHTTC---EEEEEESSCGGGCH-----------HHHHHHH-------TTCEEEESCC
T ss_pred cCCCEEEEEee-CHHHHHHHHHHHhCCC---EEEEEeCCcccCCh-----------HHHHHHh-------CCCEEEECCC
Confidence 57899999997 7789999999999997 78888875421111 1112221 2456665543
Q ss_pred CCCCCCCCHHHHHHHhcC-ccEEEEcCccCCCcccHHHHHH
Q psy7538 108 TQLKLGISEIDKKELIDN-VDIVYHVAATIRFDEPIKTAVI 147 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~-vd~ViH~AA~v~~~~~~~~~~~ 147 (543)
.+ .++++ +|.|+.+.|.......+..+.+
T Consensus 65 ~~-----------~~~~~~~d~vv~spgi~~~~p~~~~a~~ 94 (451)
T 3lk7_A 65 PL-----------ELLDEDFCYMIKNPGIPYNNPMVKKALE 94 (451)
T ss_dssp CG-----------GGGGSCEEEEEECTTSCTTSHHHHHHHH
T ss_pred hH-----------HhhcCCCCEEEECCcCCCCChhHHHHHH
Confidence 21 23455 8999998887543333343433
|
| >3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A | Back alignment and structure |
|---|
Probab=88.87 E-value=0.61 Score=49.93 Aligned_cols=99 Identities=17% Similarity=0.221 Sum_probs=58.2
Q ss_pred hhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHH-------------HHHHHHhcCchhHHHHhhc
Q psy7538 26 KTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPN-------------QRVEELFESPVFDALKTLR 92 (543)
Q Consensus 26 ~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~-------------~rl~~~~~~~~f~~l~~~~ 92 (543)
+-.++++|+|.|+ |-+|+.+++.|.+.| |.+|.+++...-..+-. .+.+ ..-++|++.+
T Consensus 323 ~kL~~~kVLIVGa-GGLGs~va~~La~aG--VG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAe-----aaa~~L~~iN 394 (598)
T 3vh1_A 323 DIIKNTKVLLLGA-GTLGCYVSRALIAWG--VRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAE-----LAAASLKRIF 394 (598)
T ss_dssp HHHHTCEEEEECC-SHHHHHHHHHHHTTT--CCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHH-----HHHHHHHHHC
T ss_pred HHHhCCeEEEECC-CHHHHHHHHHHHHcC--CCEEEEECCCcccccccccccccchhhcCcHHHH-----HHHHHHHhHC
Confidence 4567899999995 779999999999986 57898886542111000 0110 0122333322
Q ss_pred CcCCCCceEEEEccCCCCCCCC--------CHHHHHHHhcCccEEEEcCcc
Q psy7538 93 GKSILQKIQVISGDITQLKLGI--------SEIDKKELIDNVDIVYHVAAT 135 (543)
Q Consensus 93 ~~~~~~~v~~i~gDl~~~~lgl--------s~~~~~~l~~~vd~ViH~AA~ 135 (543)
|. -+++.+..++..++-.+ +.+.+..+++++|+||.|...
T Consensus 395 -P~--v~v~~~~~~I~~pgh~i~~~~~~~l~~~~l~~li~~~DvVvdatDn 442 (598)
T 3vh1_A 395 -PL--MDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDS 442 (598)
T ss_dssp -TT--CEEEEECCCCCCSSCCCCSHHHHHHHHHHHHHHHHHCSEEEECCSB
T ss_pred -CC--cEEEEEeccccccCcccccccccccCHHHHHHHHhcCCEEEECCCC
Confidence 22 24556655553322112 234567788899999987543
|
| >3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A* | Back alignment and structure |
|---|
Probab=88.79 E-value=1 Score=45.72 Aligned_cols=70 Identities=23% Similarity=0.256 Sum_probs=48.4
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
.+.||+|+|.| .|.+|+.+++.+.+.|. +|+++...+.... ....+ ..+..|
T Consensus 11 ~~~~k~IlIlG-~G~~g~~la~aa~~~G~---~vi~~d~~~~~~~----------------------~~~ad--~~~~~~ 62 (389)
T 3q2o_A 11 ILPGKTIGIIG-GGQLGRMMALAAKEMGY---KIAVLDPTKNSPC----------------------AQVAD--IEIVAS 62 (389)
T ss_dssp CCTTSEEEEEC-CSHHHHHHHHHHHHTTC---EEEEEESSTTCTT----------------------TTTCS--EEEECC
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHcCC---EEEEEeCCCCCch----------------------HHhCC--ceEecC
Confidence 46889999999 58899999999999987 7777776543210 01111 234456
Q ss_pred CCCCCCCCCHHHHHHHhcCccEEE
Q psy7538 107 ITQLKLGISEIDKKELIDNVDIVY 130 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~~vd~Vi 130 (543)
..+. +.+.++++.+|+|.
T Consensus 63 ~~d~------~~l~~~~~~~dvI~ 80 (389)
T 3q2o_A 63 YDDL------KAIQHLAEISDVVT 80 (389)
T ss_dssp TTCH------HHHHHHHHTCSEEE
T ss_pred cCCH------HHHHHHHHhCCEee
Confidence 6654 36788888899873
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=88.79 E-value=0.42 Score=49.00 Aligned_cols=37 Identities=19% Similarity=0.418 Sum_probs=32.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
..|++|+|.|+ |-+|+.+++.|...|. ++|++..|+.
T Consensus 165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~--~~V~v~~r~~ 201 (404)
T 1gpj_A 165 LHDKTVLVVGA-GEMGKTVAKSLVDRGV--RAVLVANRTY 201 (404)
T ss_dssp CTTCEEEEESC-CHHHHHHHHHHHHHCC--SEEEEECSSH
T ss_pred ccCCEEEEECh-HHHHHHHHHHHHHCCC--CEEEEEeCCH
Confidence 57999999997 9999999999998874 5899988864
|
| >2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=88.76 E-value=0.63 Score=45.45 Aligned_cols=34 Identities=26% Similarity=0.326 Sum_probs=28.8
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRT 66 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~ 66 (543)
.++|.|.||+|-+|..++..|.+.|+ +|++..|+
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~---~V~~~~~~ 54 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGY---PISILDRE 54 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTC---CEEEECTT
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCC---eEEEEECC
Confidence 36899999999999999999999987 56666664
|
| >1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A* | Back alignment and structure |
|---|
Probab=88.72 E-value=1.1 Score=43.68 Aligned_cols=34 Identities=12% Similarity=0.178 Sum_probs=29.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEe
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLM 64 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~ 64 (543)
..|++|+|.|+++.+|+.++..|++.|. +|+++.
T Consensus 163 l~gk~vvVIG~s~iVG~p~A~lL~~~gA---tVtv~h 196 (301)
T 1a4i_A 163 IAGRHAVVVGRSKIVGAPMHDLLLWNNA---TVTTCH 196 (301)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTC---EEEEEC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhCCC---eEEEEE
Confidence 5689999999999999999999999874 666653
|
| >3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=88.55 E-value=0.88 Score=47.34 Aligned_cols=33 Identities=18% Similarity=0.283 Sum_probs=29.3
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
|+|.|.| +|.+|..++..|.+.|+ +|++..|.+
T Consensus 3 mkI~VIG-~G~vG~~lA~~La~~G~---~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVG-IGYVGLVSATCFAELGA---NVRCIDTDR 35 (450)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTC---EEEEECSCH
T ss_pred CEEEEEC-cCHHHHHHHHHHHhcCC---EEEEEECCH
Confidence 6899998 69999999999999987 788888864
|
| >2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A* | Back alignment and structure |
|---|
Probab=88.49 E-value=3.2 Score=40.28 Aligned_cols=27 Identities=19% Similarity=0.273 Sum_probs=24.2
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEP 55 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~ 55 (543)
+.++|.|.|+||.+|+.+++.|++.|.
T Consensus 6 ~~~rVaViG~sG~~G~~~~~~l~~~g~ 32 (288)
T 2nu8_A 6 KNTKVICQGFTGSQGTFHSEQAIAYGT 32 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC
Confidence 457899999999999999999998864
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=88.39 E-value=1.1 Score=45.20 Aligned_cols=76 Identities=14% Similarity=0.155 Sum_probs=49.3
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
.|.+|+|+|+ |-+|...++.+...|. +|++..|+.. |++.. ++ ..... ..+ |..
T Consensus 187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga---~Vi~~~~~~~------~~~~~---------~~----~lGa~-~v~--~~~ 240 (366)
T 1yqd_A 187 PGKHIGIVGL-GGLGHVAVKFAKAFGS---KVTVISTSPS------KKEEA---------LK----NFGAD-SFL--VSR 240 (366)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESCGG------GHHHH---------HH----TSCCS-EEE--ETT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHH---------HH----hcCCc-eEE--ecc
Confidence 7899999996 9999999988887774 7888887642 22111 00 11111 122 333
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCccC
Q psy7538 109 QLKLGISEIDKKELIDNVDIVYHVAATI 136 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~vd~ViH~AA~v 136 (543)
+. +.+.++..++|+||.+++..
T Consensus 241 ~~------~~~~~~~~~~D~vid~~g~~ 262 (366)
T 1yqd_A 241 DQ------EQMQAAAGTLDGIIDTVSAV 262 (366)
T ss_dssp CH------HHHHHTTTCEEEEEECCSSC
T ss_pred CH------HHHHHhhCCCCEEEECCCcH
Confidence 32 35666667899999998853
|
| >1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A | Back alignment and structure |
|---|
Probab=88.38 E-value=1.2 Score=48.13 Aligned_cols=126 Identities=11% Similarity=0.114 Sum_probs=74.5
Q ss_pred chhhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHH-----HHHhc---CchhHHHHhhcC
Q psy7538 22 DRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRV-----EELFE---SPVFDALKTLRG 93 (543)
Q Consensus 22 ~~i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl-----~~~~~---~~~f~~l~~~~~ 93 (543)
..-++-+++.+|+|.|+ |-+|+.+++.|.+.| |++|.+++...-..+-..|- .++-. ...-++|+.-+
T Consensus 9 ~e~Q~kL~~s~VlVVGa-GGLGsevak~La~aG--VG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iN- 84 (640)
T 1y8q_B 9 RELAEAVAGGRVLVVGA-GGIGCELLKNLVLTG--FSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFY- 84 (640)
T ss_dssp HHHHHHHHHCEEEEECC-SHHHHHHHHHHHHHT--CCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTC-
T ss_pred HHHHHHHhcCeEEEECc-CHHHHHHHHHHHHcC--CCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHC-
Confidence 34556677899999996 779999999999996 46888887654221111110 00000 01223344333
Q ss_pred cCCCCceEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEe
Q psy7538 94 KSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIS 173 (543)
Q Consensus 94 ~~~~~~v~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vS 173 (543)
|. -++..+..++++.++ ...+++++|+|+.+... .. .-..+-++|.+. + ..+|+.+
T Consensus 85 P~--v~V~a~~~~i~~~~~------~~~~~~~~DlVvda~Dn------~~--------aR~~ln~~c~~~-~-iPlI~~g 140 (640)
T 1y8q_B 85 PK--ANIVAYHDSIMNPDY------NVEFFRQFILVMNALDN------RA--------ARNHVNRMCLAA-D-VPLIESG 140 (640)
T ss_dssp TT--CEEEEEESCTTSTTS------CHHHHTTCSEEEECCSC------HH--------HHHHHHHHHHHH-T-CCEEEEE
T ss_pred CC--CeEEEEecccchhhh------hHhhhcCCCEEEECCCC------HH--------HHHHHHHHHHHc-C-CCEEEEE
Confidence 32 367788888865432 23567899999987432 11 123455677776 4 3566665
Q ss_pred cC
Q psy7538 174 TA 175 (543)
Q Consensus 174 T~ 175 (543)
+.
T Consensus 141 ~~ 142 (640)
T 1y8q_B 141 TA 142 (640)
T ss_dssp EE
T ss_pred Ee
Confidence 54
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=88.33 E-value=0.39 Score=48.03 Aligned_cols=36 Identities=19% Similarity=0.242 Sum_probs=30.0
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
.|.+|+|+|| |-+|...++.+...|. ++|++..|++
T Consensus 167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga--~~Vi~~~~~~ 202 (348)
T 2d8a_A 167 SGKSVLITGA-GPLGLLGIAVAKASGA--YPVIVSEPSD 202 (348)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTC--CSEEEECSCH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEECCCH
Confidence 7899999999 9999999988877764 3688888763
|
| >2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A | Back alignment and structure |
|---|
Probab=88.32 E-value=1.1 Score=43.29 Aligned_cols=61 Identities=18% Similarity=0.174 Sum_probs=46.4
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
.+|++++|.|+++.+|+.++..|++.|.+ .+|++..|..
T Consensus 156 l~gk~vvVvG~s~iVG~p~A~lL~~~g~~-atVtv~h~~t---------------------------------------- 194 (281)
T 2c2x_A 156 IAGAHVVVIGRGVTVGRPLGLLLTRRSEN-ATVTLCHTGT---------------------------------------- 194 (281)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHTSTTTC-CEEEEECTTC----------------------------------------
T ss_pred CCCCEEEEECCCcHHHHHHHHHHhcCCCC-CEEEEEECch----------------------------------------
Confidence 57899999999999999999999988211 3677654321
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCccCCC
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAATIRF 138 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~ 138 (543)
. ++.+.++++|+||-+.+..++
T Consensus 195 --~-------~L~~~~~~ADIVI~Avg~p~~ 216 (281)
T 2c2x_A 195 --R-------DLPALTRQADIVVAAVGVAHL 216 (281)
T ss_dssp --S-------CHHHHHTTCSEEEECSCCTTC
T ss_pred --h-------HHHHHHhhCCEEEECCCCCcc
Confidence 1 477888999999988876554
|
| >1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* | Back alignment and structure |
|---|
Probab=88.32 E-value=1.5 Score=43.22 Aligned_cols=36 Identities=14% Similarity=0.157 Sum_probs=31.5
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRT 66 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~ 66 (543)
..|++++|.|++..+|+.++..|++.|. +|++..|+
T Consensus 175 l~gk~vvVIG~G~iVG~~~A~~L~~~gA---tVtv~nR~ 210 (320)
T 1edz_A 175 LYGKKCIVINRSEIVGRPLAALLANDGA---TVYSVDVN 210 (320)
T ss_dssp TTTCEEEEECCCTTTHHHHHHHHHTTSC---EEEEECSS
T ss_pred CCCCEEEEECCCcchHHHHHHHHHHCCC---EEEEEeCc
Confidence 4689999999988999999999999874 78888775
|
| >1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2 | Back alignment and structure |
|---|
Probab=88.18 E-value=0.91 Score=43.93 Aligned_cols=35 Identities=14% Similarity=0.134 Sum_probs=29.6
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEec
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMR 65 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R 65 (543)
.+|++|+|.|+++-+|+.++..|++.|. +|++..+
T Consensus 157 l~gk~vvVIG~s~iVG~p~A~lL~~~gA---tVtv~hs 191 (288)
T 1b0a_A 157 TFGLNAVVIGASNIVGRPMSMELLLAGC---TTTVTHR 191 (288)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHTTTC---EEEEECS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHCCC---eEEEEeC
Confidence 4689999999999999999999999874 6766543
|
| >1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A* | Back alignment and structure |
|---|
Probab=88.14 E-value=1.7 Score=44.88 Aligned_cols=33 Identities=15% Similarity=0.152 Sum_probs=28.7
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
|+|.|.| +|.+|..++..|.+.|+ +|.+..|++
T Consensus 1 mkI~VIG-~G~vG~~~A~~la~~G~---~V~~~d~~~ 33 (436)
T 1mv8_A 1 MRISIFG-LGYVGAVCAGCLSARGH---EVIGVDVSS 33 (436)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTC---EEEEECSCH
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCC---EEEEEECCH
Confidence 5799998 79999999999999987 788888753
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=87.94 E-value=0.49 Score=47.27 Aligned_cols=36 Identities=14% Similarity=0.270 Sum_probs=31.1
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
.|.+|+|+||+|-+|...++.+...|. +|++..++.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga---~Vi~~~~~~ 185 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGL---RVITTASRN 185 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEECCSH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCC---EEEEEeCCH
Confidence 689999999999999999988887774 888888753
|
| >3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A* | Back alignment and structure |
|---|
Probab=87.85 E-value=0.8 Score=45.62 Aligned_cols=104 Identities=17% Similarity=0.184 Sum_probs=58.9
Q ss_pred hhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHH-----HHHhc---CchhHHHHhhcCcCCC
Q psy7538 26 KTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRV-----EELFE---SPVFDALKTLRGKSIL 97 (543)
Q Consensus 26 ~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl-----~~~~~---~~~f~~l~~~~~~~~~ 97 (543)
+-.++++|+|.|+ |-+|+.+++.|.+.| |.+|.++++..-..+...|- +++-. ...-++|++-+ |.
T Consensus 30 ~kL~~~~VlIvGa-GGlGs~va~~La~aG--Vg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~in-P~-- 103 (340)
T 3rui_A 30 DIIKNTKVLLLGA-GTLGCYVSRALIAWG--VRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIF-PL-- 103 (340)
T ss_dssp HHHHTCEEEEECC-SHHHHHHHHHHHHTT--CCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHC-TT--
T ss_pred HHHhCCEEEEECC-CHHHHHHHHHHHHcC--CCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhC-CC--
Confidence 3567899999995 779999999999985 57999887754221100000 00000 01122333333 32
Q ss_pred CceEEEEccCCCCCCC--------CCHHHHHHHhcCccEEEEcCcc
Q psy7538 98 QKIQVISGDITQLKLG--------ISEIDKKELIDNVDIVYHVAAT 135 (543)
Q Consensus 98 ~~v~~i~gDl~~~~lg--------ls~~~~~~l~~~vd~ViH~AA~ 135 (543)
-++..+..++..+.-- ++.+.+..++++.|+||.+.-.
T Consensus 104 v~v~~~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tDn 149 (340)
T 3rui_A 104 MDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDS 149 (340)
T ss_dssp CEEEEECCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCSS
T ss_pred CEEEEEeccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCCC
Confidence 2455555554322111 1233466788899999988643
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=87.79 E-value=4.3 Score=39.85 Aligned_cols=35 Identities=17% Similarity=0.257 Sum_probs=30.2
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
+.|+|.|.| +|.+|..++..|.+.|+ +|++..|++
T Consensus 30 ~~~~I~iIG-~G~mG~~~a~~l~~~G~---~V~~~dr~~ 64 (320)
T 4dll_A 30 YARKITFLG-TGSMGLPMARRLCEAGY---ALQVWNRTP 64 (320)
T ss_dssp CCSEEEEEC-CTTTHHHHHHHHHHTTC---EEEEECSCH
T ss_pred CCCEEEEEC-ccHHHHHHHHHHHhCCC---eEEEEcCCH
Confidence 467999998 69999999999999987 788888864
|
| >2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A* | Back alignment and structure |
|---|
Probab=87.76 E-value=2.2 Score=36.64 Aligned_cols=40 Identities=20% Similarity=0.269 Sum_probs=33.2
Q ss_pred chhhhhcC-CCEEEEEcCc---chhHHHHHHHHHhhCCCcCEEEEEe
Q psy7538 22 DRIAKTYE-NKSIFLSGGS---GFLGKVLIEKILRLEPNVKKIYLLM 64 (543)
Q Consensus 22 ~~i~~~~~-~~~VlITGat---GFiG~~Lv~~Ll~~g~~v~~V~~l~ 64 (543)
..+..+++ .++|.|.|++ |-+|..+++.|++.|+ +|+...
T Consensus 13 ~~l~~ll~~p~~iaVVGas~~~g~~G~~~~~~l~~~G~---~v~~Vn 56 (144)
T 2d59_A 13 EDIREILTRYKKIALVGASPKPERDANIVMKYLLEHGY---DVYPVN 56 (144)
T ss_dssp HHHHHHHHHCCEEEEETCCSCTTSHHHHHHHHHHHTTC---EEEEEC
T ss_pred HHHHHHHcCCCEEEEEccCCCCCchHHHHHHHHHHCCC---EEEEEC
Confidence 34778886 8999999998 8999999999999887 566553
|
| >2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A | Back alignment and structure |
|---|
Probab=87.34 E-value=3 Score=40.93 Aligned_cols=106 Identities=15% Similarity=0.074 Sum_probs=62.1
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHH-HHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVE-ELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~-~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
.++|.|.|| |.+|..++..|++.|. .+|.+.++.... .+... ++.. ... . .....++... .|
T Consensus 4 ~~kI~VIGa-G~~G~~ia~~la~~g~--~~V~l~D~~~~~---~~~~~~~l~~-----~~~--~-~~~~~~i~~t-~d-- 66 (317)
T 2ewd_A 4 RRKIAVIGS-GQIGGNIAYIVGKDNL--ADVVLFDIAEGI---PQGKALDITH-----SMV--M-FGSTSKVIGT-DD-- 66 (317)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTC--CEEEEECSSSSH---HHHHHHHHHH-----HHH--H-HTCCCCEEEE-SC--
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC--ceEEEEeCCchH---HHHHHHHHHh-----hhh--h-cCCCcEEEEC-CC--
Confidence 468999997 9999999999999975 258888886521 12110 1100 000 0 0111233221 22
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhc
Q psy7538 109 QLKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQM 163 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~ 163 (543)
+ ..++++|+||-+++..+- .....+....|....+.+++...+.
T Consensus 67 ----------~-~a~~~aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~ 111 (317)
T 2ewd_A 67 ----------Y-ADISGSDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKY 111 (317)
T ss_dssp ----------G-GGGTTCSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred ----------H-HHhCCCCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHH
Confidence 3 346799999999875432 2222334556677777777777665
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=87.19 E-value=1.5 Score=44.26 Aligned_cols=35 Identities=20% Similarity=0.119 Sum_probs=31.1
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
.+++|+|.|+ |-+|...++.+...|. +|.+.+|..
T Consensus 183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa---~V~v~D~~~ 217 (381)
T 3p2y_A 183 KPASALVLGV-GVAGLQALATAKRLGA---KTTGYDVRP 217 (381)
T ss_dssp CCCEEEEESC-SHHHHHHHHHHHHHTC---EEEEECSSG
T ss_pred CCCEEEEECc-hHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 6789999996 9999999999999986 788888875
|
| >4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=86.93 E-value=2.5 Score=42.05 Aligned_cols=37 Identities=19% Similarity=0.219 Sum_probs=31.8
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKK 68 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~ 68 (543)
..||+|.|.| .|-||+.+++.|...|. +|.+..|...
T Consensus 169 l~gktiGIIG-lG~IG~~vA~~l~~~G~---~V~~~dr~~~ 205 (340)
T 4dgs_A 169 PKGKRIGVLG-LGQIGRALASRAEAFGM---SVRYWNRSTL 205 (340)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHTTTC---EEEEECSSCC
T ss_pred ccCCEEEEEC-CCHHHHHHHHHHHHCCC---EEEEEcCCcc
Confidence 5789999999 69999999999998876 7888888653
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=86.80 E-value=0.8 Score=47.66 Aligned_cols=36 Identities=17% Similarity=0.199 Sum_probs=30.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRT 66 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~ 66 (543)
-.|.+|+|+||+|-+|...++.+...|. +|++++++
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~Ga---~vi~~~~~ 262 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGGA---NPICVVSS 262 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCC---eEEEEECC
Confidence 4578999999999999999988887775 77777764
|
| >3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=86.70 E-value=1.5 Score=44.28 Aligned_cols=67 Identities=19% Similarity=0.272 Sum_probs=45.6
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|+|+|+ |.+|+.+++.|.+.|+ +++++...+.... ....+ ..+.+|..+.
T Consensus 2 ~~Ililg~-g~~g~~~~~a~~~~G~---~v~~~~~~~~~~~----------------------~~~~~--~~~~~~~~d~ 53 (380)
T 3ax6_A 2 KKIGIIGG-GQLGKMMTLEAKKMGF---YVIVLDPTPRSPA----------------------GQVAD--EQIVAGFFDS 53 (380)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESSTTCTT----------------------GGGSS--EEEECCTTCH
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCC---EEEEEeCCCCCch----------------------hhhCc--eEEECCCCCH
Confidence 68999996 8999999999999986 6777765432210 00111 2445676654
Q ss_pred CCCCCHHHHHHHhcCccEEEE
Q psy7538 111 KLGISEIDKKELIDNVDIVYH 131 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH 131 (543)
+.+.++++++|+|+-
T Consensus 54 ------~~l~~~~~~~d~v~~ 68 (380)
T 3ax6_A 54 ------ERIEDLVKGSDVTTY 68 (380)
T ss_dssp ------HHHHHHHHTCSEEEE
T ss_pred ------HHHHHHHhcCCEEEe
Confidence 367777788999875
|
| >3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A | Back alignment and structure |
|---|
Probab=86.70 E-value=1.4 Score=43.34 Aligned_cols=37 Identities=24% Similarity=0.296 Sum_probs=31.8
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKK 68 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~ 68 (543)
..||+|.|.| .|-||+.+++.|...|. +|.+..|+.+
T Consensus 137 l~g~tvGIiG-~G~IG~~vA~~l~~~G~---~V~~~dr~~~ 173 (315)
T 3pp8_A 137 REEFSVGIMG-AGVLGAKVAESLQAWGF---PLRCWSRSRK 173 (315)
T ss_dssp STTCCEEEEC-CSHHHHHHHHHHHTTTC---CEEEEESSCC
T ss_pred cCCCEEEEEe-eCHHHHHHHHHHHHCCC---EEEEEcCCch
Confidence 4689999999 79999999999998876 6778888754
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=86.54 E-value=1.2 Score=45.20 Aligned_cols=37 Identities=16% Similarity=0.126 Sum_probs=31.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKK 68 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~ 68 (543)
..+++|+|+|+ |-+|...++.+...|. +|++..|+..
T Consensus 170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga---~V~~~d~~~~ 206 (384)
T 1l7d_A 170 VPPARVLVFGV-GVAGLQAIATAKRLGA---VVMATDVRAA 206 (384)
T ss_dssp ECCCEEEEECC-SHHHHHHHHHHHHTTC---EEEEECSCST
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCC---EEEEEeCCHH
Confidence 36899999995 9999999999998875 6888888753
|
| >4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A | Back alignment and structure |
|---|
Probab=86.50 E-value=0.96 Score=48.50 Aligned_cols=103 Identities=17% Similarity=0.172 Sum_probs=59.7
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHH-----HHhc---CchhHHHHhhcCcCCCC
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVE-----ELFE---SPVFDALKTLRGKSILQ 98 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~-----~~~~---~~~f~~l~~~~~~~~~~ 98 (543)
-.++++|+|.|+ |-+|+.+++.|.+.| |.+|.++++..-..+-..|-- ++=. ...-++|++.+ |. -
T Consensus 323 kL~~arVLIVGa-GGLGs~vA~~La~aG--VG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iN-P~--V 396 (615)
T 4gsl_A 323 IIKNTKVLLLGA-GTLGCYVSRALIAWG--VRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIF-PL--M 396 (615)
T ss_dssp HHHTCEEEEECC-SHHHHHHHHHHHHTT--CCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHC-TT--C
T ss_pred HHhCCeEEEECC-CHHHHHHHHHHHHcC--CCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhC-CC--c
Confidence 467899999995 779999999999985 579998887652211111100 0000 01122333333 32 3
Q ss_pred ceEEEEccCCCCCCC--------CCHHHHHHHhcCccEEEEcCcc
Q psy7538 99 KIQVISGDITQLKLG--------ISEIDKKELIDNVDIVYHVAAT 135 (543)
Q Consensus 99 ~v~~i~gDl~~~~lg--------ls~~~~~~l~~~vd~ViH~AA~ 135 (543)
+++.+..++..+.-- ++.+.+..+++++|+||.|...
T Consensus 397 ~v~~~~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tDn 441 (615)
T 4gsl_A 397 DATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDS 441 (615)
T ss_dssp EEEEECCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCSS
T ss_pred EEEEeeccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCCC
Confidence 455665555322211 1234566778899999988654
|
| >3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A* | Back alignment and structure |
|---|
Probab=86.35 E-value=1.4 Score=45.02 Aligned_cols=69 Identities=23% Similarity=0.411 Sum_probs=48.3
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
.+++|+|.|| |.+|+.+++.+.+.|. +|+++. ...... ....+....+.+|..
T Consensus 23 ~~~~I~ilGg-G~lg~~l~~aa~~lG~---~v~~~d-~~~~p~----------------------~~~ad~~~~~~~~~~ 75 (403)
T 3k5i_A 23 NSRKVGVLGG-GQLGRMLVESANRLNI---QVNVLD-ADNSPA----------------------KQISAHDGHVTGSFK 75 (403)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHHTC---EEEEEE-STTCTT----------------------GGGCCSSCCEESCTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCC---EEEEEE-CCCCcH----------------------HHhccccceeecCCC
Confidence 4679999995 8999999999999987 777777 432211 001111134567777
Q ss_pred CCCCCCCHHHHHHHhcCccEEE
Q psy7538 109 QLKLGISEIDKKELIDNVDIVY 130 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~vd~Vi 130 (543)
+.+ .+..+++.+|+|+
T Consensus 76 d~~------~l~~~a~~~d~i~ 91 (403)
T 3k5i_A 76 ERE------AVRQLAKTCDVVT 91 (403)
T ss_dssp CHH------HHHHHHTTCSEEE
T ss_pred CHH------HHHHHHHhCCEEE
Confidence 654 7888888999876
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=86.07 E-value=0.76 Score=46.04 Aligned_cols=35 Identities=26% Similarity=0.287 Sum_probs=27.7
Q ss_pred CEEEEEcCcchhHHHH-HHHH-HhhCCCcCEEEEEecCCC
Q psy7538 31 KSIFLSGGSGFLGKVL-IEKI-LRLEPNVKKIYLLMRTKK 68 (543)
Q Consensus 31 ~~VlITGatGFiG~~L-v~~L-l~~g~~v~~V~~l~R~~~ 68 (543)
.+|+|+|| |-+|... ++-+ ...|. ++|++..+++.
T Consensus 174 ~~VlV~Ga-G~vG~~a~iqla~k~~Ga--~~Vi~~~~~~~ 210 (357)
T 2b5w_A 174 SSAFVLGN-GSLGLLTLAMLKVDDKGY--ENLYCLGRRDR 210 (357)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHCTTCC--CEEEEEECCCS
T ss_pred CEEEEECC-CHHHHHHHHHHHHHHcCC--cEEEEEeCCcc
Confidence 99999999 9999988 7666 55554 45999998753
|
| >2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A | Back alignment and structure |
|---|
Probab=85.80 E-value=1.3 Score=42.60 Aligned_cols=36 Identities=31% Similarity=0.484 Sum_probs=31.0
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
.++++|+|.|+ |-+|+.++..|.+.|. +|++..|+.
T Consensus 127 ~~~~~v~iiGa-G~~g~aia~~L~~~g~---~V~v~~r~~ 162 (275)
T 2hk9_A 127 VKEKSILVLGA-GGASRAVIYALVKEGA---KVFLWNRTK 162 (275)
T ss_dssp GGGSEEEEECC-SHHHHHHHHHHHHHTC---EEEEECSSH
T ss_pred cCCCEEEEECc-hHHHHHHHHHHHHcCC---EEEEEECCH
Confidence 46799999995 8999999999999975 788888863
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=85.62 E-value=1.1 Score=43.68 Aligned_cols=36 Identities=14% Similarity=0.191 Sum_probs=31.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
..|++|+|.|+ |-+|+.+++.|...|. +|++..|..
T Consensus 155 l~g~~v~IiG~-G~iG~~~a~~l~~~G~---~V~~~d~~~ 190 (300)
T 2rir_A 155 IHGSQVAVLGL-GRTGMTIARTFAALGA---NVKVGARSS 190 (300)
T ss_dssp STTSEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESSH
T ss_pred CCCCEEEEEcc-cHHHHHHHHHHHHCCC---EEEEEECCH
Confidence 56899999995 9999999999998875 788888864
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=85.39 E-value=1.1 Score=43.52 Aligned_cols=36 Identities=19% Similarity=0.260 Sum_probs=31.4
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
..|++|+|.| .|-+|+.+++.|...|. +|++..|..
T Consensus 153 l~g~~v~IiG-~G~iG~~~a~~l~~~G~---~V~~~dr~~ 188 (293)
T 3d4o_A 153 IHGANVAVLG-LGRVGMSVARKFAALGA---KVKVGARES 188 (293)
T ss_dssp STTCEEEEEC-CSHHHHHHHHHHHHTTC---EEEEEESSH
T ss_pred CCCCEEEEEe-eCHHHHHHHHHHHhCCC---EEEEEECCH
Confidence 5689999999 69999999999998875 788888864
|
| >1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2 | Back alignment and structure |
|---|
Probab=85.04 E-value=2.3 Score=44.41 Aligned_cols=122 Identities=15% Similarity=0.208 Sum_probs=70.9
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhh--CCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRL--EPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~--g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
+.++|.|.||.+..|..++..|++. +....+|.+.+|.+ +|++.+.+ .-+.+.... ....++..- .
T Consensus 27 ~~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~------e~~~~~~~--~~~~~l~~~--~~~~~I~~t-~- 94 (472)
T 1u8x_X 27 KSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDK------ERQDRIAG--ACDVFIREK--APDIEFAAT-T- 94 (472)
T ss_dssp CCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCH------HHHHHHHH--HHHHHHHHH--CTTSEEEEE-S-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCH------HHHHHHHH--HHHHHhccC--CCCCEEEEE-C-
Confidence 3469999998665577788888887 32235788888864 34433211 111221111 112233321 1
Q ss_pred CCCCCCCCCHHHHHHHhcCccEEEEcCccCCCccc-HH--------------------HHHHHHHHHHHHHHHHHHhccC
Q psy7538 107 ITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEP-IK--------------------TAVILNTRGTRDMLELSKQMKN 165 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~-~~--------------------~~~~~Nv~gt~~ll~~a~~~~~ 165 (543)
|+...++++|+||-+|+....... .+ ....-|+...+.+++.+++. .
T Consensus 95 -----------D~~eal~~AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~-~ 162 (472)
T 1u8x_X 95 -----------DPEEAFTDVDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKY-S 162 (472)
T ss_dssp -----------CHHHHHSSCSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHH-C
T ss_pred -----------CHHHHHcCCCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHH-C
Confidence 466778999999999876432111 00 11345677778888888776 5
Q ss_pred CceEEEEec
Q psy7538 166 LKCFTYIST 174 (543)
Q Consensus 166 l~~~V~vST 174 (543)
...++...|
T Consensus 163 P~A~ii~~T 171 (472)
T 1u8x_X 163 PDAWMLNYS 171 (472)
T ss_dssp TTCEEEECC
T ss_pred CCeEEEEeC
Confidence 666666555
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=84.79 E-value=0.84 Score=46.03 Aligned_cols=36 Identities=17% Similarity=0.161 Sum_probs=29.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
-.|.+|+|+|+ |-+|...++-+...|. +|++..+++
T Consensus 193 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga---~Vi~~~~~~ 228 (369)
T 1uuf_A 193 GPGKKVGVVGI-GGLGHMGIKLAHAMGA---HVVAFTTSE 228 (369)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESSG
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 35889999998 7799999887777764 688888865
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=84.63 E-value=1.2 Score=44.64 Aligned_cols=36 Identities=6% Similarity=0.125 Sum_probs=29.7
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
-.|.+|+|+| +|-+|...++.+...|. +|++..+++
T Consensus 188 ~~g~~VlV~G-~G~vG~~a~qla~~~Ga---~Vi~~~~~~ 223 (363)
T 3uog_A 188 RAGDRVVVQG-TGGVALFGLQIAKATGA---EVIVTSSSR 223 (363)
T ss_dssp CTTCEEEEES-SBHHHHHHHHHHHHTTC---EEEEEESCH
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHcCC---EEEEEecCc
Confidence 3578999999 89999999888877765 788888764
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=84.43 E-value=0.82 Score=44.05 Aligned_cols=36 Identities=25% Similarity=0.304 Sum_probs=31.6
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
.++++|+|+|+ |-+|+.++..|++.|. +|++..|+.
T Consensus 117 ~~~~~vlvlGa-Gg~g~a~a~~L~~~G~---~v~v~~R~~ 152 (272)
T 1p77_A 117 RPNQHVLILGA-GGATKGVLLPLLQAQQ---NIVLANRTF 152 (272)
T ss_dssp CTTCEEEEECC-SHHHHTTHHHHHHTTC---EEEEEESSH
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCC---EEEEEECCH
Confidence 46899999997 7799999999999983 899999974
|
| >3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp} | Back alignment and structure |
|---|
Probab=84.39 E-value=2.9 Score=41.32 Aligned_cols=37 Identities=14% Similarity=0.339 Sum_probs=32.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKK 68 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~ 68 (543)
..||+|.|.| .|-||+.+++.|...|. +|.+..|+.+
T Consensus 138 l~g~tvGIIG-lG~IG~~vA~~l~~~G~---~V~~~dr~~~ 174 (324)
T 3hg7_A 138 LKGRTLLILG-TGSIGQHIAHTGKHFGM---KVLGVSRSGR 174 (324)
T ss_dssp STTCEEEEEC-CSHHHHHHHHHHHHTTC---EEEEECSSCC
T ss_pred cccceEEEEE-ECHHHHHHHHHHHhCCC---EEEEEcCChH
Confidence 5689999999 79999999999998876 7888888763
|
| >2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=84.33 E-value=5.5 Score=38.67 Aligned_cols=39 Identities=15% Similarity=0.135 Sum_probs=27.8
Q ss_pred hhhhcCC-CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEe
Q psy7538 24 IAKTYEN-KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLM 64 (543)
Q Consensus 24 i~~~~~~-~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~ 64 (543)
+..+++. .+++|.|+||-.|+.+++.|++.|+ +.|+.+.
T Consensus 6 l~~l~~~~~~v~V~Gasg~~G~~~~~~l~~~g~--~~V~~Vn 45 (294)
T 2yv1_A 6 KMILLDENTKAIVQGITGRQGSFHTKKMLECGT--KIVGGVT 45 (294)
T ss_dssp -CCSSCTTCCEEEETTTSHHHHHHHHHHHHTTC--CEEEEEC
T ss_pred HHHHhCCCCEEEEECCCCCHHHHHHHHHHhCCC--eEEEEeC
Confidence 3445554 4578889999999999999998765 3444444
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=84.31 E-value=1 Score=45.99 Aligned_cols=35 Identities=23% Similarity=0.242 Sum_probs=30.7
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
.+.+|+|.|+ |-+|...++.+...|. +|.+.+|..
T Consensus 189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa---~V~v~D~~~ 223 (405)
T 4dio_A 189 PAAKIFVMGA-GVAGLQAIATARRLGA---VVSATDVRP 223 (405)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTC---EEEEECSST
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCC---EEEEEcCCH
Confidence 5689999996 9999999999999886 788888875
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=84.22 E-value=1.9 Score=42.79 Aligned_cols=36 Identities=17% Similarity=0.226 Sum_probs=29.8
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
.|.+|+|+|| |-+|...++.+...|. ++|++..|++
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga--~~Vi~~~~~~ 199 (343)
T 2dq4_A 164 SGKSVLITGA-GPIGLMAAMVVRASGA--GPILVSDPNP 199 (343)
T ss_dssp TTSCEEEECC-SHHHHHHHHHHHHTTC--CSEEEECSCH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEECCCH
Confidence 7899999999 9999999987777764 3688888763
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=84.08 E-value=0.8 Score=45.70 Aligned_cols=38 Identities=13% Similarity=0.273 Sum_probs=30.8
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKG 69 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~ 69 (543)
-.|.+|+|+|+ |-+|...++.+...|. +|++..++++.
T Consensus 175 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga---~Vi~~~~~~~~ 212 (348)
T 3two_A 175 TKGTKVGVAGF-GGLGSMAVKYAVAMGA---EVSVFARNEHK 212 (348)
T ss_dssp CTTCEEEEESC-SHHHHHHHHHHHHTTC---EEEEECSSSTT
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCC---eEEEEeCCHHH
Confidence 46899999997 9999998887777764 78888887643
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=84.01 E-value=3.4 Score=41.10 Aligned_cols=36 Identities=14% Similarity=0.167 Sum_probs=29.0
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
-.|.+|+|+|+ |-+|...++-+...|. +|++..+++
T Consensus 167 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga---~Vi~~~~~~ 202 (352)
T 1e3j_A 167 QLGTTVLVIGA-GPIGLVSVLAAKAYGA---FVVCTARSP 202 (352)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESCH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCC---EEEEEcCCH
Confidence 46899999997 8999999887777765 588887753
|
| >3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=83.74 E-value=2.5 Score=41.86 Aligned_cols=37 Identities=19% Similarity=0.302 Sum_probs=32.4
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKK 68 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~ 68 (543)
..||+|.|.| .|-||+.+++.|...|. +|.+..|+.+
T Consensus 135 l~gktvGIiG-lG~IG~~vA~~l~~~G~---~V~~~dr~~~ 171 (324)
T 3evt_A 135 LTGQQLLIYG-TGQIGQSLAAKASALGM---HVIGVNTTGH 171 (324)
T ss_dssp STTCEEEEEC-CSHHHHHHHHHHHHTTC---EEEEEESSCC
T ss_pred ccCCeEEEEC-cCHHHHHHHHHHHhCCC---EEEEECCCcc
Confidence 5789999999 79999999999998876 7888888754
|
| >3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum} | Back alignment and structure |
|---|
Probab=83.63 E-value=3.4 Score=42.67 Aligned_cols=127 Identities=14% Similarity=0.102 Sum_probs=71.0
Q ss_pred hhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcC--chh----HHHHhhcCcCCCCc
Q psy7538 26 KTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFES--PVF----DALKTLRGKSILQK 99 (543)
Q Consensus 26 ~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~--~~f----~~l~~~~~~~~~~~ 99 (543)
.--+..+|.|.| +|++|-.++..|.+.|+ +|++++.. ++|++.+-+. +++ +.+-.+. ....+
T Consensus 17 ~~~~m~~IaViG-lGYVGLp~A~~~A~~G~---~V~g~Did------~~kV~~ln~G~~pi~Epgl~ell~~~--~~~g~ 84 (444)
T 3vtf_A 17 RGSHMASLSVLG-LGYVGVVHAVGFALLGH---RVVGYDVN------PSIVERLRAGRPHIYEPGLEEALGRA--LSSGR 84 (444)
T ss_dssp TTCCCCEEEEEC-CSHHHHHHHHHHHHHTC---EEEEECSC------HHHHHHHHTTCCSSCCTTHHHHHHHH--HHTTC
T ss_pred CCCCCCEEEEEc-cCHHHHHHHHHHHhCCC---cEEEEECC------HHHHHHHHCCCCCCCCCCHHHHHHHH--HHcCC
Confidence 333567899998 89999999999999997 78888775 3566555331 111 1111100 00011
Q ss_pred eEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCC-Ccc--cHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCc
Q psy7538 100 IQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIR-FDE--PIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAY 176 (543)
Q Consensus 100 v~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~-~~~--~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y 176 (543)
+.+ +. +....++++|++|-|.++.. .+. ++.. + ...++.+.+.++...+-.-+|.=||.+
T Consensus 85 l~~-----tt--------~~~~ai~~ad~~~I~VpTP~~~d~~~Dl~~-v---~~a~~~I~~~l~~~~~g~lVV~eSTVp 147 (444)
T 3vtf_A 85 LSF-----AE--------SAEEAVAATDATFIAVGTPPAPDGSADLRY-V---EAAARAVGRGIRAKGRWHLVVVKSTVP 147 (444)
T ss_dssp EEE-----CS--------SHHHHHHTSSEEEECCCCCBCTTSSBCCHH-H---HHHHHHHHHHHHHHCSCCEEEECSCCC
T ss_pred eeE-----Ec--------CHHHHHhcCCceEEEecCCCCCCCCCCcHH-H---HHHHHHHHHHHhhcCCCeEEEEeCCCC
Confidence 111 11 45666788999998887642 221 1111 1 122344445554432234678889887
Q ss_pred cccCC
Q psy7538 177 CHPSE 181 (543)
Q Consensus 177 ~~~~~ 181 (543)
.-...
T Consensus 148 pGtte 152 (444)
T 3vtf_A 148 PGTTE 152 (444)
T ss_dssp TTTTT
T ss_pred CchHH
Confidence 75543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 543 | ||||
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 8e-11 | |
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 3e-09 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 3e-08 | |
| d1oc2a_ | 346 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 4e-07 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 7e-07 | |
| d1z45a2 | 347 | c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep | 9e-07 | |
| d1orra_ | 338 | c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella | 7e-06 | |
| d2c5aa1 | 363 | c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T | 1e-05 | |
| d1r6da_ | 322 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 1e-05 | |
| d1udca_ | 338 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 1e-05 | |
| d1sb8a_ | 341 | c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W | 2e-05 | |
| d1y1pa1 | 342 | c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo | 0.001 | |
| d1rkxa_ | 356 | c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia | 0.001 |
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 61.4 bits (148), Expect = 8e-11
Identities = 74/426 (17%), Positives = 127/426 (29%), Gaps = 84/426 (19%)
Query: 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKT 90
K ++G +G G L E +L V I + +RV+ +++ P
Sbjct: 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFN----TERVDHIYQDP------- 50
Query: 91 LRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIR-FDEPIKTAVILN 149
+ K + GD++ ++ I ++ D V + ++ F+ P TA + +
Sbjct: 51 ---HTCNPKFHLHYGDLSDTSN-LTRILREVQPDEVYNLGAMSHVAVSFESPEYTADV-D 105
Query: 150 TRGTRDMLELSKQ--MKNLKCFTYISTA--YCHPSEKVLEERTYLPPDDPHQVILRAESM 205
GT +LE + ++ F ST+ Y E +E T P P
Sbjct: 106 AMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSP---------- 155
Query: 206 KEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMEL-GMPCMILRPSIVVPIYKEPLPG 264
YA K A + E GM P G
Sbjct: 156 -------------------YAVAKLYAYWITVNYRESYGMYACNGILFNHES----PRRG 192
Query: 265 WTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKS 324
T T + +G+ +Y G D L W L ++ E
Sbjct: 193 ETFVTRKITRAIANIAQGLESCLYL---GNMDSLRDWGHAKDYVKMQWMMLQQEQPE--- 246
Query: 325 VCNLTSNKDYKITWQEICDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFICCLLFHWIP 384
+ + Y + ++ + K+ F T G + + H P
Sbjct: 247 DFVIATGVQYSVRQ--FVEMAAAQLGIKLRFEGTGVEEKG---------IVVSVTGHDAP 295
Query: 385 AYFLDAVILISGNKPCLVRIQERIHRGFDVFEYYANNEWEFKNGNLHQTRPKRNAREIVQ 444
VI + + R R +V + K +P+ RE+V
Sbjct: 296 GVKPGDVI---------IAVDPRYFRPAEVETLLGDPT---KAHEKLGWKPEITLREMVS 343
Query: 445 YCVEND 450
V ND
Sbjct: 344 EMVAND 349
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.2 bits (135), Expect = 3e-09
Identities = 47/232 (20%), Positives = 75/232 (32%), Gaps = 65/232 (28%)
Query: 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKT 90
K I ++GG+GF+G L +K++ V V D T
Sbjct: 2 KRILITGGAGFVGSHLTDKLMMDGHEVT-------------------------VVDNFFT 36
Query: 91 LRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIR----FDEPIKTAV 146
R +++ I + ++ + + L VD +YH+A+ PIKT
Sbjct: 37 GRKRNVEHWIGHENFELINHDV------VEPLYIEVDQIYHLASPASPPNYMYNPIKTLK 90
Query: 147 ILNTRGTRDMLELSKQMKNLKCFTYISTA--YCHPSEKVLEERTYLPPDDPHQVILRAES 204
NT GT +ML L+K + ST+ Y P E Y +P
Sbjct: 91 T-NTIGTLNMLGLAK--RVGARLLLASTSEVYGDPEVHPQSE-DYWGHVNPIGPR----- 141
Query: 205 MKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMEL-GMPCMILRPSIVV 255
Y K +AE + M+ G+ + R
Sbjct: 142 ------------------ACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTF 175
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 53.2 bits (127), Expect = 3e-08
Identities = 41/235 (17%), Positives = 77/235 (32%), Gaps = 53/235 (22%)
Query: 33 IFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLR 92
I ++GG+GF+G ++ I++ + + + T G + + ++ ES
Sbjct: 3 ILITGGAGFIGSAVVRHIIKNTQDT-VVNIDKLTYAGNL--ESLSDISESN--------- 50
Query: 93 GKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIR----FDEPIKTAVIL 148
+ DI I+ I ++ D V H+AA P
Sbjct: 51 ------RYNFEHADICDSAE-ITRIFEQY---QPDAVMHLAAESHVDRSITGPAAFIET- 99
Query: 149 NTRGTRDMLELSKQM--------KNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVIL 200
N GT +LE++++ KN F +IST + P
Sbjct: 100 NIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGD----------LPHPDEVENS 149
Query: 201 RAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMEL-GMPCMILRPSIV 254
+ E + Y+ +K ++ LV G+P ++ S
Sbjct: 150 VTLPLFTETTAYAPS-------SPYSASKASSDHLVRAWRRTYGLPTIVTNCSNN 197
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 50.0 bits (118), Expect = 4e-07
Identities = 54/321 (16%), Positives = 98/321 (30%), Gaps = 47/321 (14%)
Query: 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKT 90
K+I ++GG+GF+G + + P+V L T G N L+
Sbjct: 3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKAN--------------LEA 48
Query: 91 LRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNT 150
+ G +++++ GDI +L K + I + H + ++P N
Sbjct: 49 ILGD----RVELVVGDIADAELVDKLAAKADAIVHYAAESHNDNS--LNDPSPFIHT-NF 101
Query: 151 RGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDL 210
GT +LE +++ Y L D P E E
Sbjct: 102 IGTYTLLEAARKYDIRFHHVSTDEVYGDLP---------LREDLPGHGEGPGEKFTAETN 152
Query: 211 EVFRQDILGEFPNSYAYTKCLAEGLVAECMEL-GMPCMILRPSIVVPIYKEPLPGWTDNI 269
+ Y+ TK ++ +V + G+ I S Y+ I
Sbjct: 153 YNPS--------SPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQI 204
Query: 270 NGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLT 329
G+ +Y + + D++ + GV+ E+
Sbjct: 205 T-------NILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKG-RMGETYLIGADGEK 256
Query: 330 SNKDYKITWQEICDIGKDIVT 350
+NK+ E KD
Sbjct: 257 NNKEVLELILEKMGQPKDAYD 277
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.2 bits (116), Expect = 7e-07
Identities = 55/425 (12%), Positives = 109/425 (25%), Gaps = 91/425 (21%)
Query: 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKT 90
++G +G G L E +L V I R F + + L
Sbjct: 2 NVALITGITGQDGSYLAEFLLEKGYEVHGIV-------------RRSSSFNTGRIEHLYK 48
Query: 91 LRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNT 150
I +++ GD+T + +I + + + + + + ++
Sbjct: 49 NPQAHIEGNMKLHYGDLTDSTC-LVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDG 107
Query: 151 RGTRDMLELSKQ--MKNLKCFTYISTA--YCHPSEKVLEERTYLPPDDPHQVILRAESMK 206
GT +L+ K + N F ST+ Y E +E T P P
Sbjct: 108 VGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSP----------- 156
Query: 207 EEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMEL-GMPCMILRPSIVVPIYKEPLPGW 265
Y K A +V E + +
Sbjct: 157 ------------------YGAAKLYAYWIVVNFREAYNLFAVNGILF------------- 185
Query: 266 TDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325
N P + + RS+ G + G D+ ++K+
Sbjct: 186 --NHESPRRGANFVTRKISRSVAKIYLGQ-----LECFSLGNLDAKRDWGHAKDYVEAMW 238
Query: 326 CNLTSNKDYKITWQEICDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFICCLLFHWIPA 385
L +++ + + H +++
Sbjct: 239 LMLQNDEPEDFVIATGE-----------------VHSVREFVEKSFLHIGKTIVWEGKN- 280
Query: 386 YFLDAVILISGNKPCLVRIQERIHRGFDVFEYYANNEWEFKNGNLHQTRPKRNAREIVQY 445
+ V V + + +R +V + K +P+ E+V+
Sbjct: 281 --ENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCT---KAKQKLNWKPRVAFDELVRE 335
Query: 446 CVEND 450
V D
Sbjct: 336 MVHAD 340
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 48.5 bits (114), Expect = 9e-07
Identities = 48/349 (13%), Positives = 95/349 (27%), Gaps = 63/349 (18%)
Query: 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKT 90
K + ++GG+G++G + +++ + L + L+
Sbjct: 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVAR--------------LEV 47
Query: 91 LRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNT 150
L I D+ K ++K +D V H A E + +
Sbjct: 48 LTKH----HIPFYEVDLCDRK----GLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYH 99
Query: 151 RGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDL 210
+ L + M+ ++ ++ +P + +
Sbjct: 100 NNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPL------------ 147
Query: 211 EVFRQDILGEFPNSYAYTKCLAEGLVAECME---LGMPCMILRPSIVVPIYKEPLPGWTD 267
N Y +TK E ++ + ILR + + L G +
Sbjct: 148 ---------GPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIG--E 196
Query: 268 NINGPTGLLIG------AGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESE 321
+ G L+ G+ ++ + D P I+ V L + E
Sbjct: 197 DPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLE 256
Query: 322 RK-------SVCNLTSNKDYKITWQEICDIGKDIVTSKIPFNSTLWYPG 363
NL S K T E+ +P+ T G
Sbjct: 257 AYNENEGLCREWNLGSGKG--STVFEVYHAFCKASGIDLPYKVTGRRAG 303
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Score = 45.9 bits (107), Expect = 7e-06
Identities = 45/333 (13%), Positives = 97/333 (29%), Gaps = 37/333 (11%)
Query: 33 IFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLR 92
+ ++GG GFLG L L ++ L R L
Sbjct: 3 LLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGA-------------------TDNLH 43
Query: 93 GKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRG 152
S L + + GDI ++ + K + D+ + A + +N G
Sbjct: 44 WLSSLGNFEFVHGDIRNKND-VTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGG 102
Query: 153 TRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEV 212
T ++LE +Q + Y ST Y + +
Sbjct: 103 TLNLLEAVRQYNSNCNIIYSSTNKV-----------YGDLEQYKYNETETRYTCVDKPNG 151
Query: 213 FRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPGWTDNINGP 272
+ + +F + Y +K A+ + + + ++ + ++ +
Sbjct: 152 YDESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWF 211
Query: 273 TGLLIGAGKGVIRSMYCKNTGMA--DFLPADVAINGVFLFTWDFLNSKESERKSVCNLTS 330
+ G+ + G D L A+ I+ + L + R + N+
Sbjct: 212 CQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLY----FTALANVSKIRGNAFNIGG 267
Query: 331 NKDYKITWQEICDIGKDIVTSKIPFNSTLWYPG 363
++ E+ + +D + F +
Sbjct: 268 TIVNSLSLLELFKLLEDYCNIDMRFTNLPVRES 300
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 45.3 bits (106), Expect = 1e-05
Identities = 44/331 (13%), Positives = 95/331 (28%), Gaps = 64/331 (19%)
Query: 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDAL 88
EN I ++G GF+ + ++ V D
Sbjct: 14 ENLKISITGAGGFIASHIARRLKHEGHYVI-------------------------ASDWK 48
Query: 89 KTLRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVIL 148
K + + D+ ++ + + E +D+V + + F + + ++
Sbjct: 49 KNEHMTEDMFCDEFHLVDLRVME---NCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMY 105
Query: 149 NTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEE 208
N + + ++ +K F Y S+A +P K +
Sbjct: 106 NNTMISFNMIEAARINGIKRFFYASSACIYPEFK--------------------QLETTN 145
Query: 209 DLEVFRQDILGEFPNSYAYTKCLAEGLV-AECMELGMPCMILRPSIVVPIYKEPLPGWTD 267
E +++ K E L + G+ C I R + P W
Sbjct: 146 VSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYG----PFGTWKG 201
Query: 268 NINGPTGLLIGAGKGVIRSMYCKNTGMA--DFLPADVAINGVFLFTWDFLNSKESERKSV 325
+ G+ F D + GV T +S+ +
Sbjct: 202 GREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLT-------KSDFREP 254
Query: 326 CNLTSNKDYKITWQEICDIGKDIVTSKIPFN 356
N+ S++ ++ E+ ++ K+P +
Sbjct: 255 VNIGSDEM--VSMNEMAEMVLSFEEKKLPIH 283
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Score = 44.8 bits (105), Expect = 1e-05
Identities = 29/225 (12%), Positives = 59/225 (26%), Gaps = 47/225 (20%)
Query: 33 IFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLR 92
+ ++GG+GF+G + ++L V L L
Sbjct: 3 LLVTGGAGFIGSHFVRQLLAGAYPDVPAD-------------EVIVLDSLTYAGNRANLA 49
Query: 93 GKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRG 152
+++ + GDI + +D + + R N +G
Sbjct: 50 PVDADPRLRFVHGDIRD---AGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQG 106
Query: 153 TRDMLELSKQMKNLK-CFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLE 211
T+ +L+ + + + Y E + L P+ P
Sbjct: 107 TQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSP---------------- 150
Query: 212 VFRQDILGEFPNSYAYTKCLAEGLVAECMEL-GMPCMILRPSIVV 255
YA +K ++ + G+ I R
Sbjct: 151 -------------YAASKAGSDLVARAYHRTYGLDVRITRCCNNY 182
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Score = 45.0 bits (105), Expect = 1e-05
Identities = 32/169 (18%), Positives = 62/169 (36%), Gaps = 28/169 (16%)
Query: 33 IFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLR 92
+ ++GGSG++G ++L+ +V + L +K+ V ++ L
Sbjct: 3 VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKR--------------SVLPVIERLG 48
Query: 93 GKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIR----FDEPIKTAVIL 148
GK + GDI L + + +D V H A +P++
Sbjct: 49 GK----HPTFVEGDIRNEAL----MTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDN- 99
Query: 149 NTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQ 197
N GT ++ + N+K F + S+A + + + P P
Sbjct: 100 NVNGTLRLISAMRAA-NVKNFIFSSSATVYGDQPKIPYVESFPTGTPQS 147
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Score = 44.2 bits (103), Expect = 2e-05
Identities = 44/243 (18%), Positives = 82/243 (33%), Gaps = 46/243 (18%)
Query: 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDAL 88
+ K ++G +GF+G L+E +L+L+ V + + D +
Sbjct: 15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRN--------------LDEV 60
Query: 89 KTLRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVIL 148
++L + + I GDI L + +D V + + R T+
Sbjct: 61 RSLVSEKQWSNFKFIQGDIRNLD---DCNNACAGVDYVLHQAALGSVPRSINDPITSNAT 117
Query: 149 NTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEE 208
N G +ML ++ K + FTY +++ + P P
Sbjct: 118 NIDGFLNMLIAARDAKV-QSFTYAASSSTYGD----------HPGLP------------- 153
Query: 209 DLEVFRQDILGEFPNSYAYTKCLAEGLV-AECMELGMPCMILRPSIVVPIYKEPLPGWTD 267
+D +G+ + YA TK + E G + LR V ++P +
Sbjct: 154 ----KVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAA 209
Query: 268 NIN 270
I
Sbjct: 210 VIP 212
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Score = 39.0 bits (89), Expect = 0.001
Identities = 41/327 (12%), Positives = 90/327 (27%), Gaps = 41/327 (12%)
Query: 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDAL 88
E + ++G +GF+ ++E++L V R S + +
Sbjct: 10 EGSLVLVTGANGFVASHVVEQLLEHGYKV-----------------RGTARSASKLANLQ 52
Query: 89 KTLRGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVIL 148
K K + + D+ + E+I V H+A+ + F V
Sbjct: 53 KRWDAKYPGRFETAVVEDML------KQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTP 106
Query: 149 NTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEE 208
GT + L + ++K F S+ K + + +
Sbjct: 107 AIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKP-------NVEGIYLDEKSWNLESID 159
Query: 209 DLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPGWTDN 268
+ + + YA +K AE + M+ P L + T +
Sbjct: 160 KAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQS 219
Query: 269 INGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNL 328
+ +G ++ G + D+ + + + +
Sbjct: 220 GS-TSGWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLP-------QIERRRVY 271
Query: 329 TSNKDYKITWQEICD-IGKDIVTSKIP 354
+ + W + K + P
Sbjct: 272 GTAGTF--DWNTVLATFRKLYPSKTFP 296
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Score = 38.7 bits (88), Expect = 0.001
Identities = 15/59 (25%), Positives = 26/59 (44%)
Query: 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFD 86
++ K +F++G +GF G L + + VK L T RV + +S + D
Sbjct: 6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGD 64
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 543 | |||
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 100.0 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 100.0 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 100.0 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 100.0 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 100.0 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 100.0 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 100.0 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 100.0 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 100.0 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 100.0 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.98 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.97 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.97 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.97 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.95 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.94 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.94 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.91 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.91 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.91 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.91 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.9 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.9 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.81 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.67 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.66 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.64 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.63 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.63 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.63 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.62 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.61 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.61 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.61 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.6 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.6 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.6 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.6 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.6 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.59 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.59 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.59 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.58 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.58 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.58 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.57 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.57 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.56 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.56 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.56 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.55 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.54 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.54 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 99.54 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.53 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.53 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.51 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.51 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.5 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.5 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 99.49 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.49 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 99.49 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.47 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.46 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 99.46 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.44 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 99.43 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.43 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.43 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.42 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.41 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 99.4 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 99.39 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 99.39 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 99.39 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 99.35 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 99.34 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 99.33 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 99.32 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 99.3 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 99.23 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 99.2 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 99.19 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 99.14 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 98.98 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 98.91 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 98.86 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 98.86 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 98.8 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 98.67 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.72 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 97.62 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 97.53 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 97.31 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 97.3 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 97.25 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 97.2 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 97.1 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 97.05 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 96.99 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 96.98 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 96.92 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 96.91 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 96.76 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 96.72 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 96.72 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 96.71 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 96.7 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 96.68 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 96.55 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 96.43 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 96.39 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 96.38 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 96.36 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 96.3 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 96.27 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 96.2 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 96.0 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 95.93 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 95.55 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 95.33 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 95.16 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 94.64 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 94.62 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 94.38 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 94.28 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 94.23 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 93.9 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 93.72 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 93.61 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 93.49 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 93.38 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 93.35 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 93.19 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 93.13 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 93.0 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 92.91 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 92.79 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 92.3 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 92.25 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 92.06 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 92.03 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 91.87 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 91.77 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 91.14 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 90.99 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 90.27 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 90.18 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 90.14 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 90.09 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 89.89 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 89.63 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 89.62 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 89.32 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 88.58 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 88.3 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 88.1 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 87.96 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 87.91 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 87.57 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 87.54 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 87.07 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 87.04 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 86.65 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 86.16 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 86.05 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 86.02 | |
| d1vdca2 | 130 | Thioredoxin reductase {Mouse-ear cress (Arabidopsi | 85.85 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 85.36 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 85.05 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 85.05 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 84.63 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 84.58 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 83.96 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 83.74 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 83.72 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 83.62 | |
| d1nhpa1 | 198 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 83.59 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 82.91 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 82.84 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 82.65 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 82.55 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 81.98 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 81.94 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 81.32 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 80.98 | |
| d1u8xx1 | 167 | Maltose-6'-phosphate glucosidase GlvA {Bacillus su | 80.68 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 80.43 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 80.3 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 80.24 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 80.03 |
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=4.3e-37 Score=315.20 Aligned_cols=261 Identities=16% Similarity=0.137 Sum_probs=193.5
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|.|||||||||||++|+++|++.|+ +|++++|...... .+|++.+.+. . ....++++++.||+++.
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~---~V~~~~r~~~~~~-~~~~~~~~~~---------~-~~~~~~~~~~~~Dl~d~ 67 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGY---EVHGIKRRASSFN-TERVDHIYQD---------P-HTCNPKFHLHYGDLSDT 67 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC---EEEEECC--------------------------------CCEEECCCCSSCH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcC---EEEEEECCCcccc-hhhHHHHHhh---------h-hhcCCCeEEEEeecCCH
Confidence 7899999999999999999999997 8899999654321 2333332221 1 22346899999999987
Q ss_pred CCCCCHHHHHHHhcC--ccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhcc--CCceEEEEecCccccC--C
Q psy7538 111 KLGISEIDKKELIDN--VDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMK--NLKCFTYISTAYCHPS--E 181 (543)
Q Consensus 111 ~lgls~~~~~~l~~~--vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~--~l~~~V~vST~y~~~~--~ 181 (543)
+ +++.++++ +|+|||+||..... ++....+++|+.||.+|+++|++.+ +.++|||+||+.+++. .
T Consensus 68 ~------~~~~~~~~~~~d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~ 141 (357)
T d1db3a_ 68 S------NLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQE 141 (357)
T ss_dssp H------HHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCS
T ss_pred H------HHHHHHhccCCCEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCC
Confidence 5 78888875 59999999986543 4556789999999999999999862 3457999999866543 4
Q ss_pred CcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCC
Q psy7538 182 KVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKE 260 (543)
Q Consensus 182 ~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~ 260 (543)
.+++|+....|. |.|+.||.++|+++..+.+ ++++++++||++||||+..
T Consensus 142 ~~~~E~~~~~P~-----------------------------~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~ 192 (357)
T d1db3a_ 142 IPQKETTPFYPR-----------------------------SPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRG 192 (357)
T ss_dssp SSBCTTSCCCCC-----------------------------SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSC
T ss_pred CCcCCCCCCCCC-----------------------------ChHHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCC
Confidence 468887544443 8999999999999999888 7899999999999999653
Q ss_pred CCCCCCCCCCchHHHHHHHhcCce-eEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHH
Q psy7538 261 PLPGWTDNINGPTGLLIGAGKGVI-RSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQ 339 (543)
Q Consensus 261 p~~gw~d~~~g~~~~~~~~~~g~~-~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~ 339 (543)
+.. ........+.....|.. ....|++++.+|++||+|+|++++.++.+. .+++||++++ +++|++
T Consensus 193 ~~~----~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~~~~~-------~~~~yni~sg--~~~s~~ 259 (357)
T d1db3a_ 193 ETF----VTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQE-------QPEDFVIATG--VQYSVR 259 (357)
T ss_dssp TTS----HHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSSS-------SCCCEEECCC--CCEEHH
T ss_pred cCC----CchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHHHHHHhCC-------CCCeEEECCC--CceehH
Confidence 210 00011223444445543 445789999999999999999999888653 2568999999 899999
Q ss_pred HHHHHHhhhhcCcc
Q psy7538 340 EICDIGKDIVTSKI 353 (543)
Q Consensus 340 e~~~~i~~~~G~~~ 353 (543)
|+++.+.+.+|...
T Consensus 260 ~~~~~~~~~~g~~~ 273 (357)
T d1db3a_ 260 QFVEMAAAQLGIKL 273 (357)
T ss_dssp HHHHHHHHTTTEEE
T ss_pred HHHHHHHHHhCCcc
Confidence 99999999986443
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=100.00 E-value=7.1e-37 Score=308.94 Aligned_cols=304 Identities=16% Similarity=0.193 Sum_probs=228.9
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcC---EEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVK---KIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~---~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
|+|||||||||||++|+++|++.|+++. +|+.+.+....... .++ .. .....++.++.+|+
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~-~~~------------~~---~~~~~~~~~~~~d~ 64 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR-ANL------------AP---VDADPRLRFVHGDI 64 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG-GGG------------GG---GTTCTTEEEEECCT
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccH-hHh------------hh---hhcCCCeEEEEecc
Confidence 7899999999999999999999998654 56666655332211 000 00 22346899999999
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC--C
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE--K 182 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~--~ 182 (543)
.+.. ........+|+|+|+|+..... ......+++|+.||.+++++|++. ++++|||+||+.+++.. .
T Consensus 65 ~~~~------~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~-~~~~~I~~Ss~~~yg~~~~~ 137 (322)
T d1r6da_ 65 RDAG------LLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-GVGRVVHVSTNQVYGSIDSG 137 (322)
T ss_dssp TCHH------HHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGGGGCCCSSS
T ss_pred ccch------hhhccccccceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHc-CCceEEEeecceeecCCCCC
Confidence 9875 6777778999999999876542 345667899999999999999998 78999999999776653 3
Q ss_pred cccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCCC
Q psy7538 183 VLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKEP 261 (543)
Q Consensus 183 ~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~p 261 (543)
+++|+....|. +.|+.||..+|.++..+.+ ++++++++||+.|||+.+.+
T Consensus 138 ~~~E~~~~~p~-----------------------------~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~ 188 (322)
T d1r6da_ 138 SWTESSPLEPN-----------------------------SPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHP 188 (322)
T ss_dssp CBCTTSCCCCC-----------------------------SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCT
T ss_pred CCCCCCCCCCC-----------------------------CHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCc
Confidence 67777544443 7999999999999999887 79999999999999987543
Q ss_pred CCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHH
Q psy7538 262 LPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEI 341 (543)
Q Consensus 262 ~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~ 341 (543)
+ .-...++..+..|....+++++++.+|++||+|+|++++.++.+... +++||++++ +++++.|+
T Consensus 189 ------~-~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~~~------~~~~ni~~~--~~~s~~e~ 253 (322)
T d1r6da_ 189 ------E-KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRA------GEIYHIGGG--LELTNREL 253 (322)
T ss_dssp ------T-SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCCT------TCEEEECCC--CEEEHHHH
T ss_pred ------C-cHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHhCCCC------CCeeEEeec--ccchhHHH
Confidence 1 12345677788888888889999999999999999999999987654 789999999 99999999
Q ss_pred HHHHhhhhcCccCCCC-ccccCccccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHhh-ccccccc
Q psy7538 342 CDIGKDIVTSKIPFNS-TLWYPGGTMTQSRLTHFICCLLFHWIPAYFLDAVILISGNKPCLVRIQERIHRGF-DVFEYYA 419 (543)
Q Consensus 342 ~~~i~~~~G~~~p~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~d~~~~~~G~kP~~~~~~~~l~~~~-~~~~~f~ 419 (543)
++.+.+.+|.+.+... ....|...... ..-.+.+.+.+||+|+.. +++++ ++++||.
T Consensus 254 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~----------------~~d~~k~~~~lg~~p~~~-----~eegI~~~i~w~~ 312 (322)
T d1r6da_ 254 TGILLDSLGADWSSVRKVADRKGHDLRY----------------SLDGGKIERELGYRPQVS-----FADGLARTVRWYR 312 (322)
T ss_dssp HHHHHHHHTCCGGGEEEECCCTTCCCBC----------------CBCCHHHHHHHCCCCCSC-----HHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCccceeecCCCCCCCcee----------------eeCHHHHHHHHCCCCCCC-----HHHHHHHHHHHHH
Confidence 9999999966544221 11122111000 001344567889999975 44444 5667776
Q ss_pred cCe
Q psy7538 420 NNE 422 (543)
Q Consensus 420 ~~~ 422 (543)
.|.
T Consensus 313 ~n~ 315 (322)
T d1r6da_ 313 ENR 315 (322)
T ss_dssp HCH
T ss_pred HhH
Confidence 554
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.4e-37 Score=307.23 Aligned_cols=296 Identities=21% Similarity=0.230 Sum_probs=213.8
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|||||||||||++|+++|++.|+ +|++++|...+.. +.+.. .....++....+|+.+.
T Consensus 2 KKIlVtG~sGfiG~~lv~~L~~~g~---~V~~~d~~~~~~~--~~~~~---------------~~~~~~~d~~~~~~~~~ 61 (312)
T d2b69a1 2 KRILITGGAGFVGSHLTDKLMMDGH---EVTVVDNFFTGRK--RNVEH---------------WIGHENFELINHDVVEP 61 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSSCCG--GGTGG---------------GTTCTTEEEEECCTTSC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcC---EEEEEeCCCcCCH--HHHHH---------------hcCCCceEEEehHHHHH
Confidence 7999999999999999999999997 7888877433221 11100 11234566777776654
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCCC---cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccC--CCccc
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIRF---DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPS--EKVLE 185 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~--~~~i~ 185 (543)
++.++|+|||+||.++. .......+++|+.||.+|+++|++. ++ +|||+||..+++. ..+++
T Consensus 62 -----------~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~-~~-k~I~~SS~~vy~~~~~~~~~ 128 (312)
T d2b69a1 62 -----------LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV-GA-RLLLASTSEVYGDPEVHPQS 128 (312)
T ss_dssp -----------CCCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-TC-EEEEEEEGGGGBSCSSSSBC
T ss_pred -----------HHcCCCEEEECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEEChheecCCCCCCCC
Confidence 33579999999998763 2445678999999999999999997 55 7999999966654 34566
Q ss_pred ccccC--CCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCCCC
Q psy7538 186 ERTYL--PPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKEPL 262 (543)
Q Consensus 186 E~~y~--~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~p~ 262 (543)
|+.+. .|..|. +.|+.||.++|.++..+.+ ++++++++||+.||||+..+-
T Consensus 129 e~~~~~~~~~~p~--------------------------~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~ 182 (312)
T d2b69a1 129 EDYWGHVNPIGPR--------------------------ACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMN 182 (312)
T ss_dssp TTCCCBCCSSSTT--------------------------HHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTT
T ss_pred ccccCCCCCCCCc--------------------------cHHHHHHHHHHHHHHHHHHHhCCcEEEEEeeeEECCCCCCC
Confidence 65432 233332 7999999999999999887 799999999999999876432
Q ss_pred CCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHH
Q psy7538 263 PGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEIC 342 (543)
Q Consensus 263 ~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~ 342 (543)
.+ .-...++..+..|....+++++.+.+|++|++|+|++++.++.... +.+||++++ .++++.+++
T Consensus 183 ~~-----~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~~~-------~~~~n~~~~--~~~~~~~~~ 248 (312)
T d2b69a1 183 DG-----RVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV-------SSPVNLGNP--EEHTILEFA 248 (312)
T ss_dssp CC-----CHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSSC-------CSCEEESCC--CEEEHHHHH
T ss_pred Cc-----cHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhhcc-------CCceEecCC--cccchhhHH
Confidence 11 1223567778888888888999999999999999999998875543 458999999 999999999
Q ss_pred HHHhhhhcCccCCCCccccCccccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHhhccccccc
Q psy7538 343 DIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFICCLLFHWIPAYFLDAVILISGNKPCLVRIQERIHRGFDVFEYYA 419 (543)
Q Consensus 343 ~~i~~~~G~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~d~~~~~~G~kP~~~~~~~~l~~~~~~~~~f~ 419 (543)
+.+++.+|.+.+.......+..... . ..-.+.+.+.+||+|+.. +.+.+. ++++||.
T Consensus 249 ~~i~~~~~~~~~~~~~~~~~~~~~~--~--------------~~d~~k~~~~lgw~p~~~-l~~~I~---~~i~w~~ 305 (312)
T d2b69a1 249 QLIKNLVGSGSEIQFLSEAQDDPQK--R--------------KPDIKKAKLMLGWEPVVP-LEEGLN---KAIHYFR 305 (312)
T ss_dssp HHHHHHHTCCCCEEEECCCTTCCCC--C--------------CBCCHHHHHHHCCCCCSC-HHHHHH---HHHHHHH
T ss_pred HHHHHHhCCCCceEECCCCCCCCCe--e--------------eECHHHHHHHHCCCCCCC-HHHHHH---HHHHHHH
Confidence 9999999665443322222211100 0 001345567889999975 333333 4555653
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=3.5e-35 Score=301.26 Aligned_cols=301 Identities=17% Similarity=0.175 Sum_probs=219.7
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
++|+|||||||||||++|+++|+++|+ +|++++|.+.... ........+..+|+.
T Consensus 14 ~nMKILVTGgsGfIGs~lv~~L~~~g~---~V~~~d~~~~~~~----------------------~~~~~~~~~~~~D~~ 68 (363)
T d2c5aa1 14 ENLKISITGAGGFIASHIARRLKHEGH---YVIASDWKKNEHM----------------------TEDMFCDEFHLVDLR 68 (363)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCCSSS----------------------CGGGTCSEEEECCTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcC---EEEEEeCCCccch----------------------hhhcccCcEEEeech
Confidence 579999999999999999999999997 7888887654321 222345678889998
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCccCCC----cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCC--
Q psy7538 109 QLKLGISEIDKKELIDNVDIVYHVAATIRF----DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEK-- 182 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~vd~ViH~AA~v~~----~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~-- 182 (543)
+.+ ++..+++++|+|||+|+.... ..........|+.||.+++++|++. ++++|||+||+.+++...
T Consensus 69 ~~~------~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~-~vk~~i~~SS~~~~~~~~~~ 141 (363)
T d2c5aa1 69 VME------NCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARIN-GIKRFFYASSACIYPEFKQL 141 (363)
T ss_dssp SHH------HHHHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEEEGGGSCGGGSS
T ss_pred hHH------HHHHHhhcCCeEeecccccccccccccccccccccccchhhHHHHhHHhh-Cccccccccccccccccccc
Confidence 765 677888999999999987765 4556778999999999999999998 899999999997765432
Q ss_pred cccccccC----CCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeec
Q psy7538 183 VLEERTYL----PPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPI 257 (543)
Q Consensus 183 ~i~E~~y~----~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~ 257 (543)
+.+|.... .|..| .+.|+.||.++|++++.+.+ ++++++++||++|||+
T Consensus 142 ~~~~~~~~~~e~~~~~p--------------------------~~~Yg~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~ 195 (363)
T d2c5aa1 142 ETTNVSLKESDAWPAEP--------------------------QDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGP 195 (363)
T ss_dssp SSSSCEECGGGGSSBCC--------------------------SSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECT
T ss_pred cccccccccccCCcCCC--------------------------CCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEecc
Confidence 23222110 11111 17899999999999998887 7999999999999999
Q ss_pred CCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCccc
Q psy7538 258 YKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKIT 337 (543)
Q Consensus 258 ~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t 337 (543)
...+...+ ..............+.....++++.+.+|+||++|+|++++.++... .+++||++++ ++++
T Consensus 196 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~~~~~~-------~~~~~ni~~~--~~~s 264 (363)
T d2c5aa1 196 FGTWKGGR--EKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD-------FREPVNIGSD--EMVS 264 (363)
T ss_dssp TSCCSSSC--CCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS-------CCSCEEECCC--CCEE
T ss_pred CCcccccc--cccccccccccccccccccccCCCCeEEEEeehhHHHHHHHHHHhCC-------CCCeEEEecC--Cccc
Confidence 76542221 11222334445555666677899999999999999999999887543 2568999999 9999
Q ss_pred HHHHHHHHhhhhcCccCCCCccccCccccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHhhccccc
Q psy7538 338 WQEICDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFICCLLFHWIPAYFLDAVILISGNKPCLVRIQERIHRGFDVFEY 417 (543)
Q Consensus 338 ~~e~~~~i~~~~G~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~d~~~~~~G~kP~~~~~~~~l~~~~~~~~~ 417 (543)
+.|+++.+.+..|.+.++.... .|.. ..... .-.+.+.+.+||+|+.. +.+.+. ++++|
T Consensus 265 ~~~l~~~i~~~~g~~~~i~~~~-~~~~--~~~~~--------------~d~ska~~~LGw~p~~s-leegi~---~ti~w 323 (363)
T d2c5aa1 265 MNEMAEMVLSFEEKKLPIHHIP-GPEG--VRGRN--------------SDNNLIKEKLGWAPNMR-LKEGLR---ITYFW 323 (363)
T ss_dssp HHHHHHHHHHTTTCCCCEEEEC-CCCC--CSBCE--------------ECCHHHHHHHSCCCCCC-HHHHHH---HHHHH
T ss_pred HHHHHHHHHHHhCCCCceEeCC-CCCC--ccccc--------------cCHHHHHHHhCCCCCCC-HHHHHH---HHHHH
Confidence 9999999999996665433211 1111 00110 01345667899999874 333333 45566
Q ss_pred cc
Q psy7538 418 YA 419 (543)
Q Consensus 418 f~ 419 (543)
|.
T Consensus 324 ~~ 325 (363)
T d2c5aa1 324 IK 325 (363)
T ss_dssp HH
T ss_pred HH
Confidence 64
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=4.1e-36 Score=308.35 Aligned_cols=263 Identities=17% Similarity=0.208 Sum_probs=197.9
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|||||||||||++|+++|++.|++ .|.++.+...... .++++. ....++++++.+|++++
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~g~~--vv~~~d~~~~~~~-~~~~~~---------------~~~~~~~~~~~~Dl~d~ 62 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKNTQD--TVVNIDKLTYAGN-LESLSD---------------ISESNRYNFEHADICDS 62 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSC--EEEEEECCCTTCC-GGGGTT---------------TTTCTTEEEEECCTTCH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCC--EEEEEeCCCcccc-HHHHHh---------------hhhcCCcEEEEccCCCH
Confidence 68999999999999999999999984 3555554432221 112211 11235899999999987
Q ss_pred CCCCCHHHHHHHhc--CccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhcc--------CCceEEEEecCcc
Q psy7538 111 KLGISEIDKKELID--NVDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMK--------NLKCFTYISTAYC 177 (543)
Q Consensus 111 ~lgls~~~~~~l~~--~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~--------~l~~~V~vST~y~ 177 (543)
. .+..+++ ++|+||||||..... +.....+++|+.||.+++++|++.+ ++++|||+||..+
T Consensus 63 ~------~l~~~~~~~~~d~VihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~v 136 (361)
T d1kewa_ 63 A------EITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEV 136 (361)
T ss_dssp H------HHHHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGG
T ss_pred H------HHHHHHHhCCCCEEEECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEecccee
Confidence 6 6777776 589999999986543 2345689999999999999998862 3458999999977
Q ss_pred ccCCC--cccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCee
Q psy7538 178 HPSEK--VLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIV 254 (543)
Q Consensus 178 ~~~~~--~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V 254 (543)
++... ...|.....|...+ .....|. +.|+.||.++|.++..+.+ ++++++++||++|
T Consensus 137 yg~~~~~~~~~~~~~~~~~~e-------------~~~~~p~------s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~v 197 (361)
T d1kewa_ 137 YGDLPHPDEVENSVTLPLFTE-------------TTAYAPS------SPYSASKASSDHLVRAWRRTYGLPTIVTNCSNN 197 (361)
T ss_dssp GCCCCCGGGSCTTSCCCCBCT-------------TSCCCCC------SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEE
T ss_pred eCCCccCCccccccCCCCccc-------------CCCCCCC------CHHHHHHHHHHHHHHHHHHHhCCCEEEEecCce
Confidence 76543 23333222222110 0001111 7899999999999999887 7999999999999
Q ss_pred eecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCC
Q psy7538 255 VPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDY 334 (543)
Q Consensus 255 ~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~ 334 (543)
|||+..+ ++ -...++..+.+|....+++++++.+|++||+|+|++++.++..... +++||++++ +
T Consensus 198 yGp~~~~-----~~--~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D~a~ai~~~~~~~~~------~~~~Ni~s~--~ 262 (361)
T d1kewa_ 198 YGPYHFP-----EK--LIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGKA------GETYNIGGH--N 262 (361)
T ss_dssp ESTTCCT-----TS--HHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCCT------TCEEEECCC--C
T ss_pred ECcCCCc-----Cc--HHHHHHHHHHcCCCcEEeCCCCeEEeCEEHHHHHHHHHHHHhcCCC------CCeEEECCC--C
Confidence 9986532 11 1235777788888888889999999999999999999999987654 679999999 8
Q ss_pred cccHHHHHHHHhhhhcC
Q psy7538 335 KITWQEICDIGKDIVTS 351 (543)
Q Consensus 335 ~~t~~e~~~~i~~~~G~ 351 (543)
++++.|+++.+.+.++.
T Consensus 263 ~~s~~~~~~~i~~~~~~ 279 (361)
T d1kewa_ 263 EKKNLDVVFTICDLLDE 279 (361)
T ss_dssp EEEHHHHHHHHHHHHHH
T ss_pred CcchHHHHhHhhhhccc
Confidence 99999999999887633
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=5.6e-35 Score=296.98 Aligned_cols=311 Identities=15% Similarity=0.142 Sum_probs=216.4
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCC-HHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKT-PNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~-~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
|+|||||||||||++|+++|+++|+ +|++++|...+.. ....++. ....++.++.+|+++
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~g~---~V~~~d~~~~~~~~~~~~~~~----------------~~~~~~~~~~~Dl~d 61 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQNGH---DVIILDNLCNSKRSVLPVIER----------------LGGKHPTFVEGDIRN 61 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSSCCTTHHHHHHH----------------HHTSCCEEEECCTTC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcC---EEEEEECCCCcchhhHHHHHh----------------hcCCCCEEEEeecCC
Confidence 7899999999999999999999997 7888887654332 1111111 112478999999998
Q ss_pred CCCCCCHHHHHHHhc--CccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCC--
Q psy7538 110 LKLGISEIDKKELID--NVDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEK-- 182 (543)
Q Consensus 110 ~~lgls~~~~~~l~~--~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~-- 182 (543)
.+ .+.++++ ++|+|||+||..... +.....+++|+.||.++|++|++. ++++|||+||..+++...
T Consensus 62 ~~------~l~~~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~-~v~~~i~~Ss~~vy~~~~~~ 134 (338)
T d1udca_ 62 EA------LMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNFIFSSSATVYGDQPKI 134 (338)
T ss_dssp HH------HHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCSCCSS
T ss_pred HH------HHHHHHhccCCCEEEECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHh-CCCEEEecCcceEEcccccc
Confidence 75 7888877 799999999976543 345678999999999999999998 899999999996665432
Q ss_pred ccccc-ccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh--cCCcEEEEecCeeeecCC
Q psy7538 183 VLEER-TYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME--LGMPCMILRPSIVVPIYK 259 (543)
Q Consensus 183 ~i~E~-~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~--~~lp~~IlRps~V~G~~~ 259 (543)
...|+ ....|. +.|+.+|..+|+++..+.. .+++++++||+.|||+..
T Consensus 135 ~~~e~~~~~~p~-----------------------------~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~ 185 (338)
T d1udca_ 135 PYVESFPTGTPQ-----------------------------SPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHP 185 (338)
T ss_dssp SBCTTSCCCCCS-----------------------------SHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCT
T ss_pred ccccccccCCCc-----------------------------chHHHHHhhhhHHHHHHHhhccCCeEEEEeeccEEeccC
Confidence 23332 121222 7999999999999987655 589999999999999977
Q ss_pred CCCCCCCCCC--CchHHHHHHHh--cCceeEEeec------CCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEee
Q psy7538 260 EPLPGWTDNI--NGPTGLLIGAG--KGVIRSMYCK------NTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLT 329 (543)
Q Consensus 260 ~p~~gw~d~~--~g~~~~~~~~~--~g~~~~~~~~------~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~ 329 (543)
.+.-|.-... ......+.... .+....+.|+ +.+.+|++||+|++.+...+...... . ..+++||++
T Consensus 186 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v~D~~~~~~~~~~~~~~-~--~~~~i~Ni~ 262 (338)
T d1udca_ 186 SGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLAN-K--PGVHIYNLG 262 (338)
T ss_dssp TSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHTT-C--CEEEEEEES
T ss_pred CCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEEeehhhhcccccccccc-c--cCcceeeec
Confidence 6533321110 11122222222 2334455554 67889999999999998887765543 1 236799999
Q ss_pred cCCCCcccHHHHHHHHhhhhcCccCCCCccccCccccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHH
Q psy7538 330 SNKDYKITWQEICDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFICCLLFHWIPAYFLDAVILISGNKPCLVRIQERIH 409 (543)
Q Consensus 330 s~~~~~~t~~e~~~~i~~~~G~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~d~~~~~~G~kP~~~~~~~~l~ 409 (543)
++ +++|+.|+++.+.+.+|.+.+.......|... ...+ .-.+.+.+.+||+|... +.+.+.
T Consensus 263 ~~--~~~si~e~~~~i~~~~g~~~~~~~~~~~~~~~--~~~~--------------~d~~k~~~~lgwkp~~~-l~egi~ 323 (338)
T d1udca_ 263 AG--VGNSVLDVVNAFSKACGKPVNYHFAPRREGDL--PAYW--------------ADASKADRELNWRVTRT-LDEMAQ 323 (338)
T ss_dssp CS--SCEEHHHHHHHHHHHHTSCCCEEEECCCTTCC--SBCC--------------BCCHHHHHHHCCCCCCC-HHHHHH
T ss_pred CC--CCCcHHHHHHHHHHHHCCCCceEECCCCCCCC--CEee--------------ECHHHHHHHHCCCcCCC-HHHHHH
Confidence 98 89999999999999997654433222222110 0000 01345567899999885 333333
Q ss_pred HhhccccccccC
Q psy7538 410 RGFDVFEYYANN 421 (543)
Q Consensus 410 ~~~~~~~~f~~~ 421 (543)
++++||..+
T Consensus 324 ---~ti~w~~~~ 332 (338)
T d1udca_ 324 ---DTWHWQSRH 332 (338)
T ss_dssp ---HHHHHHHHC
T ss_pred ---HHHHHHHhc
Confidence 456677655
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=9.6e-35 Score=296.17 Aligned_cols=318 Identities=16% Similarity=0.193 Sum_probs=223.3
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+|+|||||||||||++|+++|++.|++| +|+++++...... ..++. .....+++++.+|+++
T Consensus 2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v-~v~~~d~~~~~~~-~~~~~----------------~~~~~~i~~~~~Di~d 63 (346)
T d1oc2a_ 2 FKNIIVTGGAGFIGSNFVHYVYNNHPDV-HVTVLDKLTYAGN-KANLE----------------AILGDRVELVVGDIAD 63 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTC-EEEEEECCCTTCC-GGGTG----------------GGCSSSEEEEECCTTC
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHCCCCe-EEEEEeCCCcccc-HHHHH----------------HhhcCCeEEEEccCCC
Confidence 6899999999999999999999999877 5666654332211 11110 1234689999999998
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCcccc
Q psy7538 110 LKLGISEIDKKELIDNVDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEE 186 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i~E 186 (543)
.+ .+..++++.+.|+|+|+..... .+....+++|+.||.+++++|++. + .++|++||+.+++... ..|
T Consensus 64 ~~------~~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~-~-~k~i~~ss~~vyg~~~-~~~ 134 (346)
T d1oc2a_ 64 AE------LVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY-D-IRFHHVSTDEVYGDLP-LRE 134 (346)
T ss_dssp HH------HHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH-T-CEEEEEEEGGGGCCBC-CGG
T ss_pred HH------HHHHHHhhhhhhhhhhhcccccchhhCcccceeeehHhHHhhhhhhccc-c-ccccccccceEecccC-ccc
Confidence 75 7899999999999999987643 334568899999999999999998 4 5789999997765432 122
Q ss_pred cccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCCCCCCC
Q psy7538 187 RTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKEPLPGW 265 (543)
Q Consensus 187 ~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~p~~gw 265 (543)
+....+..+. +...+.++ ....+.|+.||.++|.+++.+.+ .+++++|+||++||||+..+-
T Consensus 135 ~~~~~~~~~~-----------~~~~e~~~---~~p~s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~--- 197 (346)
T d1oc2a_ 135 DLPGHGEGPG-----------EKFTAETN---YNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE--- 197 (346)
T ss_dssp GSTTTTCSTT-----------SSBCTTSC---CCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT---
T ss_pred cccccccCcc-----------cccccCCC---CCCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCcc---
Confidence 2111100000 00000000 01127899999999999998877 799999999999999865321
Q ss_pred CCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHHHHH
Q psy7538 266 TDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEICDIG 345 (543)
Q Consensus 266 ~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~~~i 345 (543)
.....++.....|....+++++++.++++|++|+|++++.++.+... ++.||++++ ++.++.++++.+
T Consensus 198 ----~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~~~~~~~~------~~~~~~~~~--~~~~~~~~~~~i 265 (346)
T d1oc2a_ 198 ----KFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGRM------GETYLIGAD--GEKNNKEVLELI 265 (346)
T ss_dssp ----SHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHHCCT------TCEEEECCS--CEEEHHHHHHHH
T ss_pred ----chhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHHHHHHhhccc------Ccccccccc--ccccchHHHHHH
Confidence 12234566667787778899999999999999999999988877665 789999999 899999999999
Q ss_pred hhhhcCccCCCC-ccccCccccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHhhccccccccCe
Q psy7538 346 KDIVTSKIPFNS-TLWYPGGTMTQSRLTHFICCLLFHWIPAYFLDAVILISGNKPCLVRIQERIHRGFDVFEYYANNE 422 (543)
Q Consensus 346 ~~~~G~~~p~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~d~~~~~~G~kP~~~~~~~~l~~~~~~~~~f~~~~ 422 (543)
.+.+|...+... ....|.... ... .-.+.+.+.+||+|+++.+.+.+++ +++||..|+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~--~~~--------------~d~~k~~~~LGw~P~~t~l~e~i~~---ti~w~~~n~ 324 (346)
T d1oc2a_ 266 LEKMGQPKDAYDHVTDRAGHDL--RYA--------------IDASKLRDELGWTPQFTDFSEGLEE---TIQWYTDNQ 324 (346)
T ss_dssp HHHTTCCTTCSEEECCCTTCCC--BCC--------------BCCHHHHHHHCCCCSCCCHHHHHHH---HHHHHHHTH
T ss_pred HHHhCCCCcceEECCCCCCCCc--eee--------------eCHHHHHHHHCCCCcCCCHHHHHHH---HHHHHHHHH
Confidence 999855432211 111111100 000 0134566889999998665555554 667776654
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=6.9e-35 Score=296.57 Aligned_cols=264 Identities=21% Similarity=0.213 Sum_probs=207.9
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCC-HHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKT-PNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~-~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+.|+|||||||||||++|+++|++.|+ +|++++|...+.. ..++++.+.. .....++.++.+|+
T Consensus 15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~---~V~~~d~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~d~ 79 (341)
T d1sb8a_ 15 QPKVWLITGVAGFIGSNLLETLLKLDQ---KVVGLDNFATGHQRNLDEVRSLVS------------EKQWSNFKFIQGDI 79 (341)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSSCCHHHHHHHHHHSC------------HHHHTTEEEEECCT
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcC---EEEEEECCCCcchhhHHHHHHhhh------------hcccCCeeEEeecc
Confidence 458999999999999999999999998 7889988654432 1122222211 11235789999999
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCccCCC---cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccC--CC
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAATIRF---DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPS--EK 182 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~--~~ 182 (543)
.+.. .........+.|+|+||.... .+.....+++|+.||.+++++|++. ++++|||+||+.+++. ..
T Consensus 80 ~d~~------~~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~-~~~~~i~~SS~~vyg~~~~~ 152 (341)
T d1sb8a_ 80 RNLD------DCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-KVQSFTYAASSSTYGDHPGL 152 (341)
T ss_dssp TSHH------HHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGGGTTCCCS
T ss_pred cccc------ccccccccccccccccccccccccccCccchhheeehhHHHHHHHHHhc-CCceEEEcccceeeCCCCCC
Confidence 9875 577777889999999987654 3445668999999999999999998 7999999999977654 34
Q ss_pred cccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCCC
Q psy7538 183 VLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKEP 261 (543)
Q Consensus 183 ~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~p 261 (543)
+++|+....|. +.|+.||.++|+++..+.+ .+++++|+||+.|||+...|
T Consensus 153 ~~~E~~~~~p~-----------------------------~~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~ 203 (341)
T d1sb8a_ 153 PKVEDTIGKPL-----------------------------SPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDP 203 (341)
T ss_dssp SBCTTCCCCCC-----------------------------SHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCC
T ss_pred CccCCCCCCCC-----------------------------CcchHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCC
Confidence 67787555444 8999999999999998887 78999999999999998766
Q ss_pred CCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHH
Q psy7538 262 LPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEI 341 (543)
Q Consensus 262 ~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~ 341 (543)
-..+ .+ -...++..+..|....+.+++.+.+|++||+|+|.|+..++..... ..+++||++++ ++.|+.|+
T Consensus 204 ~~~~-~~--~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~~----~~~~~~~~~~~--~~~si~~i 274 (341)
T d1sb8a_ 204 NGAY-AA--VIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLD----ARNQVYNIAVG--GRTSLNQL 274 (341)
T ss_dssp CSTT-CC--HHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGG----GCSEEEEESCS--CCEEHHHH
T ss_pred CCch-hh--hHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhhhhhhhcccc----ccceeeeeccc--ccchHHHH
Confidence 3221 11 1123566777888888899999999999999999999888876543 24779999998 89999999
Q ss_pred HHHHhhhhcCc
Q psy7538 342 CDIGKDIVTSK 352 (543)
Q Consensus 342 ~~~i~~~~G~~ 352 (543)
++.+.+.+|.+
T Consensus 275 ~~~i~~~~~~~ 285 (341)
T d1sb8a_ 275 FFALRDGLAEN 285 (341)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHhccc
Confidence 99999988543
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=4.3e-34 Score=290.54 Aligned_cols=262 Identities=16% Similarity=0.142 Sum_probs=197.7
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|||||||||||++|+++|+++|+ .+|+++++.+.... + ....++++++.||+++.
T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~g~--~~V~~ld~~~~~~~---~------------------~~~~~~~~~i~~Di~~~ 57 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLLREDH--YEVYGLDIGSDAIS---R------------------FLNHPHFHFVEGDISIH 57 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTT--CEEEEEESCCGGGG---G------------------GTTCTTEEEEECCTTTC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC--CEEEEEeCCCcchh---h------------------hccCCCeEEEECccCCh
Confidence 6899999999999999999999984 27999987653211 0 12246899999999987
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCCCcc---cHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC--Cccc
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIRFDE---PIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE--KVLE 185 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~~~~---~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~--~~i~ 185 (543)
+ +..+.+.+++|+|||+||...... ....++++|+.||.+++++|.+. +. +++++||+.+++.. ...+
T Consensus 58 ~-----~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~-~~-~~~~~ss~~~~~~~~~~~~~ 130 (342)
T d2blla1 58 S-----EWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-RK-RIIFPSTSEVYGMCSDKYFD 130 (342)
T ss_dssp S-----HHHHHHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-TC-EEEEECCGGGGBTCCCSSBC
T ss_pred H-----HHHHHHHhCCCccccccccccccccccCCccccccccccccccccccccc-cc-cccccccccccccccccccc
Confidence 5 234446778999999999876433 33468999999999999999997 54 55778888555433 2333
Q ss_pred cccc----CCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCC
Q psy7538 186 ERTY----LPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKE 260 (543)
Q Consensus 186 E~~y----~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~ 260 (543)
|... .++..|. +.|+.||.++|+++..+.+ ++++++++||+.++|+...
T Consensus 131 ~~~~~~~~~~~~~p~--------------------------~~Y~~sK~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~ 184 (342)
T d2blla1 131 EDHSNLIVGPVNKPR--------------------------WIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLD 184 (342)
T ss_dssp TTTCCCBCCCTTCGG--------------------------GHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCC
T ss_pred cccccccccccCCCc--------------------------chhhhcccchhhhhhhhhcccCceeEEeecccccccccc
Confidence 3211 1122222 7899999999999999888 7999999999999999766
Q ss_pred CCCCCCCCCC-chHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHH
Q psy7538 261 PLPGWTDNIN-GPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQ 339 (543)
Q Consensus 261 p~~gw~d~~~-g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~ 339 (543)
+.-+-..+.. ....++..+..|....+++++++.++++|++|+|+++..++.+... . ..+++||++++. +++|+.
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~~~~~~~~~-~--~~g~~~Nig~~~-~~~t~~ 260 (342)
T d2blla1 185 NLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGN-R--CDGEIINIGNPE-NEASIE 260 (342)
T ss_dssp CTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGG-T--TTTEEEEECCTT-SEEEHH
T ss_pred ccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceeeeehhhccc-c--CCCeEEEEeccc-chhHHH
Confidence 5332222211 1234677788898888899999999999999999999999987543 1 247899998752 468999
Q ss_pred HHHHHHhhhhcCc
Q psy7538 340 EICDIGKDIVTSK 352 (543)
Q Consensus 340 e~~~~i~~~~G~~ 352 (543)
|+++.+.+..|..
T Consensus 261 ~l~~~i~~~~~~~ 273 (342)
T d2blla1 261 ELGEMLLASFEKH 273 (342)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHhCCC
Confidence 9999999998544
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2e-34 Score=293.98 Aligned_cols=317 Identities=17% Similarity=0.143 Sum_probs=216.5
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHH-HHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPN-QRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~-~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
|.|||||||||||++|+++|++.|+ +|++++|...+.... .+.+. ....+++++.+|+++
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~---~V~~~d~~~~~~~~~~~~~~~----------------~~~~~v~~~~~Dl~d 62 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGY---DCVVADNLSNSTYDSVARLEV----------------LTKHHIPFYEVDLCD 62 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSSCCTHHHHHHHH----------------HHTSCCCEEECCTTC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcC---eEEEEECCCCcchhHHHhHHh----------------hcccCCeEEEeecCC
Confidence 6899999999999999999999997 788887755443211 11111 122478899999998
Q ss_pred CCCCCCHHHHHHHhc--CccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCC--
Q psy7538 110 LKLGISEIDKKELID--NVDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEK-- 182 (543)
Q Consensus 110 ~~lgls~~~~~~l~~--~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~-- 182 (543)
.+ +++.+++ ++|+|||+||..... +.......+|+.||.+++++|++. ++++||++||..+++...
T Consensus 63 ~~------~l~~~~~~~~~d~VihlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~-~i~~~i~~SS~~vyg~~~~~ 135 (347)
T d1z45a2 63 RK------GLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-NVSKFVFSSSATVYGDATRF 135 (347)
T ss_dssp HH------HHHHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCCGGGS
T ss_pred HH------HHHHHHhccCCCEEEEccccccccccccCcccccccchhhhHHHHHHHHhc-ccceEEeecceeeecCcccC
Confidence 75 7887766 799999999987532 344568899999999999999997 899999999997776432
Q ss_pred ----cccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh---cCCcEEEEecCeee
Q psy7538 183 ----VLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME---LGMPCMILRPSIVV 255 (543)
Q Consensus 183 ----~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~---~~lp~~IlRps~V~ 255 (543)
+++|+....|. +.|+.||.++|+++..+.+ .+++++++||+.||
T Consensus 136 ~~~~~~~e~~~~~p~-----------------------------~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~ 186 (347)
T d1z45a2 136 PNMIPIPEECPLGPT-----------------------------NPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPI 186 (347)
T ss_dssp TTCCSBCTTSCCCCC-----------------------------SHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEE
T ss_pred CCCCccccccCCCCC-----------------------------ChhHhHHHHHHHHHHHHHHhhccCCcEEEEeecceE
Confidence 24443222222 8999999999999988754 58999999999999
Q ss_pred ecCCCCCCCCCCC--CCchHHHHHHHh--cCceeEEeec------CCcccccchHHHHHHHHHHHhhhhcccC-CCCCCc
Q psy7538 256 PIYKEPLPGWTDN--INGPTGLLIGAG--KGVIRSMYCK------NTGMADFLPADVAINGVFLFTWDFLNSK-ESERKS 324 (543)
Q Consensus 256 G~~~~p~~gw~d~--~~g~~~~~~~~~--~g~~~~~~~~------~~~~~d~V~vddva~a~i~a~~~~~~~~-~~~~~~ 324 (543)
|+...+.-|.... .......+.... ++....+.|+ +....|++++.|++.+++.++....... ....++
T Consensus 187 g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (347)
T d1z45a2 187 GAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCR 266 (347)
T ss_dssp CCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEE
T ss_pred eecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceeeeeeeeecccccccccccccccccccccccc
Confidence 9876553332111 111222333333 2333334444 4567788889999999988877654311 112367
Q ss_pred EEEeecCCCCcccHHHHHHHHhhhhcCccCCCCccccCccccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHH
Q psy7538 325 VCNLTSNKDYKITWQEICDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFICCLLFHWIPAYFLDAVILISGNKPCLVRI 404 (543)
Q Consensus 325 vyni~s~~~~~~t~~e~~~~i~~~~G~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~d~~~~~~G~kP~~~~~ 404 (543)
+||++++ +++|+.|+++.+.+..|.+.+.......|... ... . .-.+.+.+.+||+|+..
T Consensus 267 ~~Ni~~~--~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~-~~~-------------~--~d~sk~~~~lGw~p~~~-- 326 (347)
T d1z45a2 267 EWNLGSG--KGSTVFEVYHAFCKASGIDLPYKVTGRRAGDV-LNL-------------T--AKPDRAKRELKWQTELQ-- 326 (347)
T ss_dssp EEEESCS--CCEEHHHHHHHHHHHHTCCCCC---------C-CCC-------------C--BCCHHHHHHTCCCCCCC--
T ss_pred cceecCC--CcccHHHHHHHHHHHHCCCCceEeCCCCCCCC-CEe-------------e--ECHHHHHHHHCCCCCCC--
Confidence 9999998 89999999999999997665543222222110 000 0 01345678899999875
Q ss_pred HHHHHHhh-ccccccccCeEEE
Q psy7538 405 QERIHRGF-DVFEYYANNEWEF 425 (543)
Q Consensus 405 ~~~l~~~~-~~~~~f~~~~w~f 425 (543)
+++++ ++++||..|+|.|
T Consensus 327 ---lee~i~~ti~w~~~np~~~ 345 (347)
T d1z45a2 327 ---VEDSCKDLWKWTTENPFGY 345 (347)
T ss_dssp ---HHHHHHHHHHHHHHCTTCS
T ss_pred ---HHHHHHHHHHHHHhChhcC
Confidence 44444 5677888887655
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=3.9e-33 Score=280.64 Aligned_cols=255 Identities=17% Similarity=0.145 Sum_probs=196.6
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|||||||||||++|+++|+++|+ +|++++|...... .+|++++ ...+++.++.+|+++.
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~---~V~~~~r~~~~~~-~~~l~~~---------------~~~~~~~~~~~Dl~d~ 61 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGY---RVHGLVARRSSDT-RWRLREL---------------GIEGDIQYEDGDMADA 61 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCCSSCC-CHHHHHT---------------TCGGGEEEEECCTTCH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcC---EEEEEECCCCccc-HHHHHHh---------------cccCCcEEEEccccCh
Confidence 6899999999999999999999997 8899999765432 3455442 2335799999999987
Q ss_pred CCCCCHHHHHHHhc--CccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccC--CCc
Q psy7538 111 KLGISEIDKKELID--NVDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPS--EKV 183 (543)
Q Consensus 111 ~lgls~~~~~~l~~--~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~--~~~ 183 (543)
. .+...+. ..++++|+|+..... ++....++.|+.||.+++++|++.+..++|++.||+.+++. ...
T Consensus 62 ~------~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~ 135 (321)
T d1rpna_ 62 C------SVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAER 135 (321)
T ss_dssp H------HHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSS
T ss_pred H------HhhhhhccccccccccccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCC
Confidence 5 5666554 467999998876542 44567899999999999999999855668999999855543 335
Q ss_pred ccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCCCC
Q psy7538 184 LEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKEPL 262 (543)
Q Consensus 184 i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~p~ 262 (543)
.+|+.+..|. +.|+.+|.++|+++..+.. ++++++++||++||||...+
T Consensus 136 ~~E~~~~~p~-----------------------------~~Y~~sK~~~E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~- 185 (321)
T d1rpna_ 136 QDENTPFYPR-----------------------------SPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGI- 185 (321)
T ss_dssp BCTTSCCCCC-----------------------------SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCT-
T ss_pred CCCCCCcccc-----------------------------ChhHHHHHHHHHHHHHHHhhcCCcEEEEEEecccCCCccc-
Confidence 6666544443 8999999999999999887 78999999999999986432
Q ss_pred CCCCCCCCchHHHHHHHhcCc-eeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHH
Q psy7538 263 PGWTDNINGPTGLLIGAGKGV-IRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEI 341 (543)
Q Consensus 263 ~gw~d~~~g~~~~~~~~~~g~-~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~ 341 (543)
.+.. .....++.....|. .....+++++.+|++||+|+|++++.++.+.. +..||++++ ++.++.++
T Consensus 186 -~~~~--~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~~~-------~~~~ni~~~--~~~s~~~~ 253 (321)
T d1rpna_ 186 -EFVT--RKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK-------ADDYVVATG--VTTTVRDM 253 (321)
T ss_dssp -TSHH--HHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS-------CCCEEECCS--CEEEHHHH
T ss_pred -cccH--HHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhcCC-------cCCceeccc--ccceehhh
Confidence 0000 01122344444443 44567899999999999999999999987653 457999998 89999999
Q ss_pred HHHHhhhhcCc
Q psy7538 342 CDIGKDIVTSK 352 (543)
Q Consensus 342 ~~~i~~~~G~~ 352 (543)
++.+.+..|..
T Consensus 254 ~~~~~~~~~~~ 264 (321)
T d1rpna_ 254 CQIAFEHVGLD 264 (321)
T ss_dssp HHHHHHTTTCC
T ss_pred hHHHHHHhCCC
Confidence 99999988554
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-33 Score=286.17 Aligned_cols=316 Identities=15% Similarity=0.158 Sum_probs=214.9
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCC----CHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGK----TPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~----~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
|+|||||||||||++|+++|++.|+ +|++++|...+. ...++++.+ . .....++.++.+|
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~g~---~V~~ld~~~~~~~~~~~~~~~~~~~---------~----~~~~~~~~~~~~D 66 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEAGY---LPVVIDNFHNAFRGGGSLPESLRRV---------Q----ELTGRSVEFEEMD 66 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTC---CEEEEECSSSSCBCSSSSBHHHHHH---------H----HHHTCCCEEEECC
T ss_pred CeEEEECCCcHHHHHHHHHHHHCcC---EEEEEECCCccccccccchHHHHHH---------H----HhcCCCcEEEEee
Confidence 6899999999999999999999997 677776532211 111222111 1 1123578999999
Q ss_pred CCCCCCCCCHHHHHHHhc--CccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC
Q psy7538 107 ITQLKLGISEIDKKELID--NVDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE 181 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~--~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~ 181 (543)
+++.+ .+..++. .+++|+|+||..... ......+++|+.||.+++++|++. ++++|+|+||+.+++..
T Consensus 67 l~d~~------~l~~~~~~~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~-~v~~~i~~ss~~~~~~~ 139 (346)
T d1ek6a_ 67 ILDQG------ALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH-GVKNLVFSSSATVYGNP 139 (346)
T ss_dssp TTCHH------HHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGGCSC
T ss_pred ccccc------cccccccccccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhc-Ccccccccccceeeecc
Confidence 99875 6777665 467899999976543 234567999999999999999998 89999999999655543
Q ss_pred Cc--c-cccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh--cCCcEEEEecCeeee
Q psy7538 182 KV--L-EERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME--LGMPCMILRPSIVVP 256 (543)
Q Consensus 182 ~~--i-~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~--~~lp~~IlRps~V~G 256 (543)
.. . .+..... ..++|+.+|..+|+.+.++.+ .+++.+++||+.+||
T Consensus 140 ~~~~~~~~~~~~~-----------------------------~~~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G 190 (346)
T d1ek6a_ 140 QYLPLDEAHPTGG-----------------------------CTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTG 190 (346)
T ss_dssp SSSSBCTTSCCCC-----------------------------CSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEEC
T ss_pred ccccccccccccc-----------------------------cCChHHHHHHHHHHHHHHHHHhccCCceEEEeecceec
Confidence 32 1 1111111 127899999999999998765 589999999999999
Q ss_pred cCCCCCCCCCCC-C-CchHHHH--HHHhcCceeEEee------cCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 257 IYKEPLPGWTDN-I-NGPTGLL--IGAGKGVIRSMYC------KNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 257 ~~~~p~~gw~d~-~-~g~~~~~--~~~~~g~~~~~~~------~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
+...+..|.... . ......+ ....++....+.+ ++.+.+||+|++|+|+++..++..... . ..+++|
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~-~--~~~~i~ 267 (346)
T d1ek6a_ 191 AHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKE-Q--CGCRIY 267 (346)
T ss_dssp CCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTT-T--CCEEEE
T ss_pred cCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCeeEeEEEEEeccchhhhhcccccc-c--cCceEE
Confidence 976543332211 1 1112222 2334455444444 466789999999999999888766543 1 246799
Q ss_pred EeecCCCCcccHHHHHHHHhhhhcCccCCCCccccCccccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHH
Q psy7538 327 NLTSNKDYKITWQEICDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFICCLLFHWIPAYFLDAVILISGNKPCLVRIQE 406 (543)
Q Consensus 327 ni~s~~~~~~t~~e~~~~i~~~~G~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~d~~~~~~G~kP~~~~~~~ 406 (543)
|++++ +++++.|+++.+.+.+|.+.|.......|..... . . .-.+.+.+.+||+|++. +.+
T Consensus 268 Ni~~~--~~~s~~dl~~~i~~~~~~~~~~~~~~~~~~e~~~--~------------~--~d~~k~~~~lgw~p~~s-lee 328 (346)
T d1ek6a_ 268 NLGTG--TGYSVLQMVQAMEKASGKKIPYKVVARREGDVAA--C------------Y--ANPSLAQEELGWTAALG-LDR 328 (346)
T ss_dssp EECCS--CCEEHHHHHHHHHHHHCSCCCEEEECCCTTCCSE--E------------C--BCCHHHHHTTCCCCCCC-HHH
T ss_pred EeCCC--CcccHHHHHHHHHHHhCCCCCeEECCCCCCCCCE--e------------e--ECHHHHHHHHCCCcCCC-HHH
Confidence 99998 8999999999999999766554332222221100 0 0 01345677899999885 333
Q ss_pred HHHHhhccccccccCeE
Q psy7538 407 RIHRGFDVFEYYANNEW 423 (543)
Q Consensus 407 ~l~~~~~~~~~f~~~~w 423 (543)
.++ ++++||..|+=
T Consensus 329 ~I~---~~i~w~~~n~~ 342 (346)
T d1ek6a_ 329 MCE---DLWRWQKQNPS 342 (346)
T ss_dssp HHH---HHHHHHHHCTT
T ss_pred HHH---HHHHHHHhCHh
Confidence 343 45667766653
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=100.00 E-value=1.4e-32 Score=284.02 Aligned_cols=328 Identities=15% Similarity=0.163 Sum_probs=214.0
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhh-CCCcCEEEEEec---CCCCCC---HHHHHHHHhcCchhHHHHhhcCcCCCCceE
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRL-EPNVKKIYLLMR---TKKGKT---PNQRVEELFESPVFDALKTLRGKSILQKIQ 101 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~-g~~v~~V~~l~R---~~~~~~---~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~ 101 (543)
.+|+|||||||||||++|+++||+. |+ +|+++++ +..... ..++.... ++............++.
T Consensus 1 ~~MKVLITG~tGfIGs~lv~~LL~~~~~---~V~~~D~l~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 72 (383)
T d1gy8a_ 1 SHMRVLVCGGAGYIGSHFVRALLRDTNH---SVVIVDSLVGTHGKSDHVETRENVARK-----LQQSDGPKPPWADRYAA 72 (383)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHHCCC---EEEEEECCTTTTTCCTTSCCHHHHHHH-----HHHSCSSCCTTTTCCCE
T ss_pred CcCEEEEeCCCcHHHHHHHHHHHHhCCC---EEEEEecCCcccccchhhhhhhhHHHH-----hhhhccccccccccceE
Confidence 3689999999999999999999975 55 7777754 222111 11111111 11111111022345788
Q ss_pred EEEccCCCCCCCCCHHHHHHHhc---CccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecC
Q psy7538 102 VISGDITQLKLGISEIDKKELID---NVDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTA 175 (543)
Q Consensus 102 ~i~gDl~~~~lgls~~~~~~l~~---~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~ 175 (543)
++.||+++++ .++.+++ ++|+|||+||..... .......++|+.||.+++++|++. ++++++++||.
T Consensus 73 ~~~~Di~d~~------~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~-~~~~~~~~~s~ 145 (383)
T d1gy8a_ 73 LEVGDVRNED------FLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH-KCDKIIFSSSA 145 (383)
T ss_dssp EEESCTTCHH------HHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEG
T ss_pred EEECcccCHH------Hhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhcc-CCccccccccc
Confidence 9999999875 6777764 579999999987643 334567899999999999999998 88999999998
Q ss_pred ccccCCC---------cccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCc
Q psy7538 176 YCHPSEK---------VLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMP 245 (543)
Q Consensus 176 y~~~~~~---------~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp 245 (543)
.+++... ++.|+....|. +.|+.+|..+|+++..+.+ ++++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~e~~~~~p~-----------------------------~~Y~~sK~~~e~~~~~~~~~~gl~ 196 (383)
T d1gy8a_ 146 AIFGNPTMGSVSTNAEPIDINAKKSPE-----------------------------SPYGESKLIAERMIRDCAEAYGIK 196 (383)
T ss_dssp GGTBSCCC-----CCCCBCTTSCCBCS-----------------------------SHHHHHHHHHHHHHHHHHHHHCCE
T ss_pred ccccccccccccccccccccccCCCCC-----------------------------CHHHhhHhHHHHHHHHHHHHhCCC
Confidence 6654332 12222222222 8999999999999999887 7999
Q ss_pred EEEEecCeeeecCCCC-CCCCCCCCCchHH-----HHH------------HHhcCceeEEee------cCCcccccchHH
Q psy7538 246 CMILRPSIVVPIYKEP-LPGWTDNINGPTG-----LLI------------GAGKGVIRSMYC------KNTGMADFLPAD 301 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p-~~gw~d~~~g~~~-----~~~------------~~~~g~~~~~~~------~~~~~~d~V~vd 301 (543)
++++||+.|||+...+ .+.+......... ++. ....+....+.| ++.+.+||+||+
T Consensus 197 ~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~ 276 (383)
T d1gy8a_ 197 GICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVC 276 (383)
T ss_dssp EEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHH
T ss_pred EEEEecceeeccCccccccccccccchhHHHHHHHHHhhccccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHH
Confidence 9999999999998765 2222222221111 111 112233333443 478889999999
Q ss_pred HHHHHHHHHhhhhcccC---CCCCCcEEEeecCCCCcccHHHHHHHHhhhhcCccCCCCccccCccccccchhHHHHHHH
Q psy7538 302 VAINGVFLFTWDFLNSK---ESERKSVCNLTSNKDYKITWQEICDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFICCL 378 (543)
Q Consensus 302 dva~a~i~a~~~~~~~~---~~~~~~vyni~s~~~~~~t~~e~~~~i~~~~G~~~p~~~~~~~p~~~~~~~~~~~~~~~~ 378 (543)
|+|++++.++....... ....+++||++++ +++++.|+++.+.+..|...+.......|... ....
T Consensus 277 D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~--~~~s~~el~~~i~~~~~~~~~~~~~~~~~~d~--~~~~------- 345 (383)
T d1gy8a_ 277 DLASAHILALDYVEKLGPNDKSKYFSVFNLGTS--RGYSVREVIEVARKTTGHPIPVRECGRREGDP--AYLV------- 345 (383)
T ss_dssp HHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCS--CCEEHHHHHHHHHHHHCCCCCEEEECCCTTCC--SEEC-------
T ss_pred HHHHHHHHHHhhhccccccccccCccEEEeCCC--CceeHHHHHHHHHHHhCCCCceEECCCCCCCc--CEee-------
Confidence 99999999887643200 1124679999999 89999999999999996665543322222210 0000
Q ss_pred HHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHhhccccccccC
Q psy7538 379 LFHWIPAYFLDAVILISGNKPCLVRIQERIHRGFDVFEYYANN 421 (543)
Q Consensus 379 ~~~~~p~~~~d~~~~~~G~kP~~~~~~~~l~~~~~~~~~f~~~ 421 (543)
.-.+.+.+.+||+|++. +.+.+.+ ..++|+..+
T Consensus 346 -------~d~~k~~k~LGw~P~~~-l~e~i~~--t~~~w~~~~ 378 (383)
T d1gy8a_ 346 -------AASDKAREVLGWKPKYD-TLEAIME--TSWKFQRTH 378 (383)
T ss_dssp -------BCCHHHHHHTCCCCSCC-SHHHHHH--HHHHHHHTC
T ss_pred -------eCHHHHHHHHCCccCCC-HHHHHHH--HHHHHHHhC
Confidence 01356678899999875 3333433 234566543
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.4e-33 Score=284.19 Aligned_cols=262 Identities=15% Similarity=0.083 Sum_probs=192.5
Q ss_pred CEE-EEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 31 KSI-FLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 31 ~~V-lITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
|+| ||||||||||++|+++|+++|+ +|++++|...... ..+++.+...+ . .....+++++.+|+++
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~g~---~V~~i~r~~~~~~-~~~~~~~~~~~--------~-~~~~~~~~~~~~Dl~d 67 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEKGY---EVHGIVRRSSSFN-TGRIEHLYKNP--------Q-AHIEGNMKLHYGDLTD 67 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCCSSCC-CTTTGGGC------------------CEEEEECCTTC
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCcC---EEEEEECCCcccc-hhhHHHHhhch--------h-hhccCCcEEEEeecCC
Confidence 578 9999999999999999999998 8999999654321 11222111100 0 2234578999999998
Q ss_pred CCCCCCHHHHHHHhc--CccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhcc--CCceEEEEecCccccC--
Q psy7538 110 LKLGISEIDKKELID--NVDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMK--NLKCFTYISTAYCHPS-- 180 (543)
Q Consensus 110 ~~lgls~~~~~~l~~--~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~--~l~~~V~vST~y~~~~-- 180 (543)
++ .+..++. ++++|+|+||..... +.....+++|+.||.+++++|++++ +.++|||+||+.+++.
T Consensus 68 ~~------~~~~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~ 141 (347)
T d1t2aa_ 68 ST------CLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQ 141 (347)
T ss_dssp HH------HHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCS
T ss_pred ch------hhHHHHhhcccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCC
Confidence 76 6777765 578999999976543 3445678999999999999999973 3358999999966654
Q ss_pred CCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCC
Q psy7538 181 EKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYK 259 (543)
Q Consensus 181 ~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~ 259 (543)
..+++|+....|. ++|+.||.++|+++..+.+ ++++++++||+.|||+..
T Consensus 142 ~~~~~E~~~~~P~-----------------------------~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~ 192 (347)
T d1t2aa_ 142 EIPQKETTPFYPR-----------------------------SPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRR 192 (347)
T ss_dssp SSSBCTTSCCCCC-----------------------------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTS
T ss_pred CCCCCCCCCCCCC-----------------------------CHHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCC
Confidence 3467777554443 8999999999999998876 799999999999999865
Q ss_pred CCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHH
Q psy7538 260 EPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQ 339 (543)
Q Consensus 260 ~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~ 339 (543)
.+..+ .. .....++.....+......+++++.++++||+|+|++++.++.+.. ...|+++.. ...+++
T Consensus 193 ~~~~~--~~-~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~-------~~~~~~~~~--~~~~~~ 260 (347)
T d1t2aa_ 193 GANFV--TR-KISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDE-------PEDFVIATG--EVHSVR 260 (347)
T ss_dssp CTTSH--HH-HHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSSS-------CCCEEECCS--CCEEHH
T ss_pred CCCcc--cc-ccceeeehhhcCCcceeecCCCcceeeeeEecHHHHHHHHHhhcCC-------Cccceeccc--cccccc
Confidence 43110 00 0011133333445556678899999999999999999999987754 346888887 789999
Q ss_pred HHHHHHhhhhcCc
Q psy7538 340 EICDIGKDIVTSK 352 (543)
Q Consensus 340 e~~~~i~~~~G~~ 352 (543)
+.........|..
T Consensus 261 ~~~~~~~~~~~~~ 273 (347)
T d1t2aa_ 261 EFVEKSFLHIGKT 273 (347)
T ss_dssp HHHHHHHHHTTCC
T ss_pred hhhhhhhhhhcce
Confidence 9999888887554
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=100.00 E-value=6.6e-32 Score=274.67 Aligned_cols=272 Identities=15% Similarity=0.148 Sum_probs=196.2
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
+||+|||||||||||++|+++|+++|+ +|++++|+... .+.++...+ . +........+.+|+.
T Consensus 10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~---~V~~~vR~~~~---~~~~~~~~~-----~------~~~~~~~~~~~~Dl~ 72 (342)
T d1y1pa1 10 EGSLVLVTGANGFVASHVVEQLLEHGY---KVRGTARSASK---LANLQKRWD-----A------KYPGRFETAVVEDML 72 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSHHH---HHHHHHHHH-----H------HSTTTEEEEECSCTT
T ss_pred CcCEEEEECCCCHHHHHHHHHHHHCcC---EEEEEeCCchh---HHHHHHhhh-----c------cccccccEEEecccc
Confidence 499999999999999999999999997 78899997421 222222111 0 222345567889999
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCC------
Q psy7538 109 QLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEK------ 182 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~------ 182 (543)
++. .+..++.++|+|+|+|+...+..+.......|+.||.+++++|.+.+++++|||+||..+.....
T Consensus 73 ~~~------~~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~ 146 (342)
T d1y1pa1 73 KQG------AYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGI 146 (342)
T ss_dssp STT------TTTTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCC
T ss_pred chh------hhhhhcccchhhhhhcccccccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCc
Confidence 887 67788899999999999998888888889999999999999999987899999999975433221
Q ss_pred cccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh---cCCcEEEEecCeeeecCC
Q psy7538 183 VLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME---LGMPCMILRPSIVVPIYK 259 (543)
Q Consensus 183 ~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~---~~lp~~IlRps~V~G~~~ 259 (543)
..+|+.+ +...+.. .....++. ...| .+.|+.||..+|++++.+.+ .++.++++||+.|+|+..
T Consensus 147 ~~~e~~~----~~~~~~~-~~~~~e~~--~~~p------~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~ 213 (342)
T d1y1pa1 147 YLDEKSW----NLESIDK-AKTLPESD--PQKS------LWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIF 213 (342)
T ss_dssp EECTTCC----CHHHHHH-HHHSCTTS--TTHH------HHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCS
T ss_pred ccccccc----ccccccc-cccccccC--CCCC------cCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCC
Confidence 1222211 1111111 00011110 0111 16899999999999988766 368899999999999865
Q ss_pred CCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHH
Q psy7538 260 EPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQ 339 (543)
Q Consensus 260 ~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~ 339 (543)
.|.. +......++..+.+|.... ...+...+++|||+|+|++++.++.+... +..||++++ +++++.
T Consensus 214 ~~~~----~~~~~~~~~~~l~~g~~~~-~~~~~~~~~~v~v~Dva~~~i~~l~~~~~------~g~~~~~~~--~~~t~~ 280 (342)
T d1y1pa1 214 DPET----QSGSTSGWMMSLFNGEVSP-ALALMPPQYYVSAVDIGLLHLGCLVLPQI------ERRRVYGTA--GTFDWN 280 (342)
T ss_dssp CTTT----CCCHHHHHHHHHHTTCCCH-HHHTCCSEEEEEHHHHHHHHHHHHHCTTC------CSCEEEECC--EEECHH
T ss_pred Cccc----cccchHHHHHHHHcCCcCc-ccCCccceeeeeHHHHHHHHHHhhcCccc------cceEEEEcC--CceEHH
Confidence 5422 2123445667777776543 33566778999999999999999887654 445668887 889999
Q ss_pred HHHHHHhhhh
Q psy7538 340 EICDIGKDIV 349 (543)
Q Consensus 340 e~~~~i~~~~ 349 (543)
|+++.+.+.+
T Consensus 281 eia~~i~k~~ 290 (342)
T d1y1pa1 281 TVLATFRKLY 290 (342)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHc
Confidence 9999999887
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=1.9e-32 Score=283.91 Aligned_cols=277 Identities=13% Similarity=0.091 Sum_probs=187.2
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEe---cC-----------CCCCCHHHHHHHHhcCchhHHHHhhcCcC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLM---RT-----------KKGKTPNQRVEELFESPVFDALKTLRGKS 95 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~---R~-----------~~~~~~~~rl~~~~~~~~f~~l~~~~~~~ 95 (543)
||+|||||||||||++|+++|++.|+ +|++++ |. .......+++..+ . ..
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~---~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~-~~ 64 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNY---EVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRW------------K-AL 64 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHH------------H-HH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcC---EEEEEecCCcccccccccccccccccchHHHHHHH------------H-hh
Confidence 79999999999999999999999998 566663 21 1111222222111 0 11
Q ss_pred CCCceEEEEccCCCCCCCCCHHHHHHHhcC--ccEEEEcCccCCCc------ccHHHHHHHHHHHHHHHHHHHHhccCCc
Q psy7538 96 ILQKIQVISGDITQLKLGISEIDKKELIDN--VDIVYHVAATIRFD------EPIKTAVILNTRGTRDMLELSKQMKNLK 167 (543)
Q Consensus 96 ~~~~v~~i~gDl~~~~lgls~~~~~~l~~~--vd~ViH~AA~v~~~------~~~~~~~~~Nv~gt~~ll~~a~~~~~l~ 167 (543)
..++++++.||+++.+ .++.++++ +|+|||+||..... +.....+++|+.||.+++++|++.+..+
T Consensus 65 ~~~~i~~~~~Dl~d~~------~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~ 138 (393)
T d1i24a_ 65 TGKSIELYVGDICDFE------FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEEC 138 (393)
T ss_dssp HCCCCEEEESCTTSHH------HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred cCCCcEEEEccCCCHH------HHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhcccc
Confidence 2357999999999876 78888874 69999999976432 2234578999999999999999984455
Q ss_pred eEEEEecCccccCCC-cccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCc
Q psy7538 168 CFTYISTAYCHPSEK-VLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMP 245 (543)
Q Consensus 168 ~~V~vST~y~~~~~~-~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp 245 (543)
.+++.||..+++... +.+|...+...+. ..+...... ...+.|+.||.++|.++..+.+ .+++
T Consensus 139 ~~i~~ss~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~------~p~~~Y~~sK~~aE~~~~~~~~~~~l~ 203 (393)
T d1i24a_ 139 HLVKLGTMGEYGTPNIDIEEGYITITHNG---------RTDTLPYPK------QASSFYHLSKVHDSHNIAFTCKAWGIR 203 (393)
T ss_dssp EEEEECCGGGGCCCSSCBCSSEEEEEETT---------EEEEEECCC------CCCSHHHHHHHHHHHHHHHHHHHHCCE
T ss_pred ceeeccccccccccccccccccccccccc---------ccccccccc------ccccHHHHHhhhhccccccccccccee
Confidence 677777775544322 2222211100000 000000000 1127899999999999998887 7999
Q ss_pred EEEEecCeeeecCCCCCC--CCC----C--CCCc--hHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhc
Q psy7538 246 CMILRPSIVVPIYKEPLP--GWT----D--NING--PTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFL 315 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~--gw~----d--~~~g--~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~ 315 (543)
++++||++|||+...+.. ++. + ..++ ...++.....|....++|++.+.+|++||+|+|++++.++.+..
T Consensus 204 ~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~ 283 (393)
T d1i24a_ 204 ATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPA 283 (393)
T ss_dssp EEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCC
T ss_pred eeecccccccCCCccccccccccccccccccccccchhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhc
Confidence 999999999999865421 110 0 1111 23466677888888889999999999999999999999998765
Q ss_pred ccCCCCCCcEEEeecCCCCcccHHHHHHHHhhhh
Q psy7538 316 NSKESERKSVCNLTSNKDYKITWQEICDIGKDIV 349 (543)
Q Consensus 316 ~~~~~~~~~vyni~s~~~~~~t~~e~~~~i~~~~ 349 (543)
. .+ .|++.++..+++++.++++.+.+..
T Consensus 284 ~-----~g-~~~~~~~~~~~~si~el~~~i~~~~ 311 (393)
T d1i24a_ 284 K-----AG-EFRVFNQFTEQFSVNELASLVTKAG 311 (393)
T ss_dssp C-----TT-CEEEEEECSEEEEHHHHHHHHHHHH
T ss_pred c-----cc-eeeeecCCCCeeEHHHHHHHHHHHH
Confidence 4 23 3333221126799999999998876
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.98 E-value=5.3e-32 Score=271.69 Aligned_cols=296 Identities=14% Similarity=0.117 Sum_probs=204.8
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
-|+|||||||||||++|+++|++.|+ .+.++.+.. ..|+.+
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~g~---~vi~~~~~~------------------------------------~~~~~~ 42 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQRGD---VELVLRTRD------------------------------------ELNLLD 42 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTT---EEEECCCTT------------------------------------TCCTTC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCcC---EEEEecCch------------------------------------hccccC
Confidence 47999999999999999999999986 444443321 135555
Q ss_pred CCCCCCHHHHHHHhc--CccEEEEcCccCCCc----ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC--
Q psy7538 110 LKLGISEIDKKELID--NVDIVYHVAATIRFD----EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE-- 181 (543)
Q Consensus 110 ~~lgls~~~~~~l~~--~vd~ViH~AA~v~~~----~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~-- 181 (543)
.. .+..+++ .+|+|+|+|+.+... .+..+.+++|+.||.+++++|++. ++++|||+||..+++..
T Consensus 43 ~~------~~~~~~~~~~~d~v~~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~v~~~i~~SS~~vyg~~~~ 115 (315)
T d1e6ua_ 43 SR------AVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN-DVNKLLFLGSSCIYPKLAK 115 (315)
T ss_dssp HH------HHHHHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGGGSCTTCC
T ss_pred HH------HHHHHHhhcCCCEEEEcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEECCceEcCCCCC
Confidence 43 5666654 589999999877542 345567899999999999999998 89999999999777653
Q ss_pred CcccccccCC-CCChHHHHHHHhhcchhhhhhhhhhccCCCC-chHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecC
Q psy7538 182 KVLEERTYLP-PDDPHQVILRAESMKEEDLEVFRQDILGEFP-NSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIY 258 (543)
Q Consensus 182 ~~i~E~~y~~-p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p-n~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~ 258 (543)
.+++|+.... +.. +| +.|+.||.++|+++..+.+ ++++++|+||++|||++
T Consensus 116 ~~~~E~~~~~~~~~--------------------------~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~ 169 (315)
T d1e6ua_ 116 QPMAESELLQGTLE--------------------------PTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPH 169 (315)
T ss_dssp SSBCGGGTTSSCCC--------------------------GGGHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTT
T ss_pred CCccCCccccCCCC--------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCC
Confidence 3566653211 111 11 4799999999999999887 79999999999999997
Q ss_pred CCCCCCCC--CCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhccc---CCCCCCcEEEeecCCC
Q psy7538 259 KEPLPGWT--DNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNS---KESERKSVCNLTSNKD 333 (543)
Q Consensus 259 ~~p~~gw~--d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~---~~~~~~~vyni~s~~~ 333 (543)
..+..... ...............+....+.+++...++++|++|++.++..++...... ........+|++++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 247 (315)
T d1e6ua_ 170 DNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTG-- 247 (315)
T ss_dssp CCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCS--
T ss_pred CCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHHHHHhhhhccccccccccccccccccCCC--
Confidence 64321110 000111223455566777778889999999999999999999887654320 01123568999988
Q ss_pred CcccHHHHHHHHhhhhcCccCCCCccccCccccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHhh-
Q psy7538 334 YKITWQEICDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFICCLLFHWIPAYFLDAVILISGNKPCLVRIQERIHRGF- 412 (543)
Q Consensus 334 ~~~t~~e~~~~i~~~~G~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~d~~~~~~G~kP~~~~~~~~l~~~~- 412 (543)
.+.+..++++.+.+..|.+..+......|..... ... -.+.+ +.+||+|+.. +.+++
T Consensus 248 ~~~~i~~~~~~i~~~~~~~~~i~~~~~~~~~~~~--~~~--------------d~sk~-k~Lg~~p~~~-----l~e~i~ 305 (315)
T d1e6ua_ 248 VDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPR--KLL--------------DVTRL-HQLGWYHEIS-----LEAGLA 305 (315)
T ss_dssp CCEEHHHHHHHHHHHHTCCSEEEEETTSCCCCSB--CCB--------------CCHHH-HHTTCCCCCC-----HHHHHH
T ss_pred cchHHHHHHHHHHHHhCCCcceEECCCCCCCCce--ecc--------------CHHHH-HHcCCCCCCC-----HHHHHH
Confidence 8899999999999998665433222223322110 000 12233 4689999875 44444
Q ss_pred ccccccccC
Q psy7538 413 DVFEYYANN 421 (543)
Q Consensus 413 ~~~~~f~~~ 421 (543)
++++||..|
T Consensus 306 ~ti~w~~~N 314 (315)
T d1e6ua_ 306 STYQWFLEN 314 (315)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHc
Confidence 566777654
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.97 E-value=2e-31 Score=269.96 Aligned_cols=258 Identities=17% Similarity=0.111 Sum_probs=189.3
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|++||||||||||++|++.|+++|+ +|++++|..+... .+|+..+...+ . ......+.++.+|+++.
T Consensus 2 k~~LVTGatGfiG~~lv~~Ll~~g~---~V~~~~r~~~~~~-~~~~~~~~~~~-----~----~~~~~~~~~~~~Di~~~ 68 (339)
T d1n7ha_ 2 KIALITGITGQDGSYLTEFLLGKGY---EVHGLIRRSSNFN-TQRINHIYIDP-----H----NVNKALMKLHYADLTDA 68 (339)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCCSSCC-CTTTTTTC-----------------CCEEEEECCTTCH
T ss_pred CEEEEeCCccHHHHHHHHHHHHCcC---EEEEEECCCcccc-hhhhhhhhhhh-----h----hccccceEEEEccccCH
Confidence 7899999999999999999999998 8999999754211 11211111000 0 11235688999999987
Q ss_pred CCCCCHHHHHHHhc--CccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhcc----CCceEEEEecCccccCC
Q psy7538 111 KLGISEIDKKELID--NVDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMK----NLKCFTYISTAYCHPSE 181 (543)
Q Consensus 111 ~lgls~~~~~~l~~--~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~----~l~~~V~vST~y~~~~~ 181 (543)
+ .+...++ ++|+|||+||..... +.......+|+.|+.+++++|++.. ...++++.||++.++..
T Consensus 69 ~------~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~ 142 (339)
T d1n7ha_ 69 S------SLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGST 142 (339)
T ss_dssp H------HHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTS
T ss_pred H------HHHHHHhhhccchhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccC
Confidence 5 6666664 679999999987653 3456788999999999999998641 34578888888776654
Q ss_pred C-cccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCC
Q psy7538 182 K-VLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYK 259 (543)
Q Consensus 182 ~-~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~ 259 (543)
. .++|+.+..|. +.|+.+|..+|+++..+.+ ++++++++||+.|||+..
T Consensus 143 ~~~~~E~~~~~p~-----------------------------~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~ 193 (339)
T d1n7ha_ 143 PPPQSETTPFHPR-----------------------------SPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRR 193 (339)
T ss_dssp CSSBCTTSCCCCC-----------------------------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTS
T ss_pred CCCCCCCCCCCCc-----------------------------chhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCC
Confidence 4 56776544333 8999999999999999888 799999999999999865
Q ss_pred CCCCCCCCCCCchHH---HHHHHh-cCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCc
Q psy7538 260 EPLPGWTDNINGPTG---LLIGAG-KGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYK 335 (543)
Q Consensus 260 ~p~~gw~d~~~g~~~---~~~~~~-~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~ 335 (543)
.+ + ..... .+.... .+....+.+++.+.+|++|++|+|+++..++..... ..++++++ .+
T Consensus 194 ~~--~-----~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a~~~~~~~~~~~~-------~~~~~~~~--~~ 257 (339)
T d1n7ha_ 194 GE--N-----FVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQEKP-------DDYVVATE--EG 257 (339)
T ss_dssp CT--T-----SHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTSSSC-------CEEEECCS--CE
T ss_pred CC--C-----CCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehHHHHHHHHHhcCCC-------Cccccccc--cc
Confidence 32 1 11111 222222 233445678999999999999999999999887543 35666666 78
Q ss_pred ccHHHHHHHHhhhhcCc
Q psy7538 336 ITWQEICDIGKDIVTSK 352 (543)
Q Consensus 336 ~t~~e~~~~i~~~~G~~ 352 (543)
.++.++++.+.+..|..
T Consensus 258 ~s~~~~~~~~~~~~~~~ 274 (339)
T d1n7ha_ 258 HTVEEFLDVSFGYLGLN 274 (339)
T ss_dssp EEHHHHHHHHHHHTTCC
T ss_pred cccchhhhhhhhhhhcc
Confidence 99999999999998554
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.97 E-value=2.7e-30 Score=263.35 Aligned_cols=312 Identities=15% Similarity=0.145 Sum_probs=213.8
Q ss_pred hhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEE
Q psy7538 25 AKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVIS 104 (543)
Q Consensus 25 ~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~ 104 (543)
.+||+||+|||||||||||++|+++|++.|+ +|++++|....... .++. ....++++++.
T Consensus 3 ~~~~~~KkILVTG~tGfIGs~lv~~Ll~~g~---~V~~~~r~~~~~~~-----------~~~~------~~~~~~i~~~~ 62 (356)
T d1rkxa_ 3 NSFWQGKRVFVTGHTGFKGGWLSLWLQTMGA---TVKGYSLTAPTVPS-----------LFET------ARVADGMQSEI 62 (356)
T ss_dssp HHHHTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCSSSSC-----------HHHH------TTTTTTSEEEE
T ss_pred hhhhCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCCCccHH-----------HHhh------hhcccCCeEEE
Confidence 3699999999999999999999999999997 78999998754321 1111 22345799999
Q ss_pred ccCCCCCCCCCHHHHHHHhc--CccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCcccc
Q psy7538 105 GDITQLKLGISEIDKKELID--NVDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHP 179 (543)
Q Consensus 105 gDl~~~~lgls~~~~~~l~~--~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~ 179 (543)
||+++++ .+.++++ .+|+|+|+||..... ........+|+.|+.+++++|++.+..+.+++.||+++..
T Consensus 63 ~Dl~d~~------~l~~~~~~~~~~~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~ 136 (356)
T d1rkxa_ 63 GDIRDQN------KLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYD 136 (356)
T ss_dssp CCTTCHH------HHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBC
T ss_pred eeccChH------hhhhhhhhchhhhhhhhhccccccccccCCccccccccccchhhhhhhhcccccccccccccccccc
Confidence 9999875 6777765 579999999986542 3456789999999999999999986677777777775554
Q ss_pred CCC---cccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----------cCCcE
Q psy7538 180 SEK---VLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----------LGMPC 246 (543)
Q Consensus 180 ~~~---~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----------~~lp~ 246 (543)
... +.+|+....|. +.|+.+|..+|..+..+.. .++++
T Consensus 137 ~~~~~~~~~~~~~~~p~-----------------------------~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~ 187 (356)
T d1rkxa_ 137 NKEWIWGYRENEAMGGY-----------------------------DPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAV 187 (356)
T ss_dssp CCCSSSCBCTTSCBCCS-----------------------------SHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEE
T ss_pred ccccccccccccccCCC-----------------------------CccccccccchhhhhHHhhhcccchhccccCceE
Confidence 433 33333222222 7899999999988876542 36889
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
+++||+.|||+.+.+.. ..+..++.... +....+.+.+++.++++|++|+|.+++.++..... .....+...
T Consensus 188 ~~~r~~~vyGp~~~~~~------~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~v~D~~~a~~~~~~~~~~-~~~~~~~~~ 259 (356)
T d1rkxa_ 188 ATVRAGNVIGGGDWALD------RIVPDILRAFE-QSQPVIIRNPHAIRPWQHVLEPLSGYLLLAQKLYT-DGAEYAEGW 259 (356)
T ss_dssp EEEECCCEECTTCCCSS------CHHHHHHHHHH-TTCCEECSCTTCEECCEETHHHHHHHHHHHHHHHH-TCGGGCSEE
T ss_pred EeccCCCeeCCCcchhh------HHHHHHHHHHh-CCCceEEeeccccccccccccccchhhhhhhhhcc-ccccccccc
Confidence 99999999998753211 11223444444 44445688999999999999999999998887654 211123345
Q ss_pred EeecCCCCcccHHHHHHHHhhhhcCccCCCCcccc-CccccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHH
Q psy7538 327 NLTSNKDYKITWQEICDIGKDIVTSKIPFNSTLWY-PGGTMTQSRLTHFICCLLFHWIPAYFLDAVILISGNKPCLVRIQ 405 (543)
Q Consensus 327 ni~s~~~~~~t~~e~~~~i~~~~G~~~p~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~p~~~~d~~~~~~G~kP~~~~~~ 405 (543)
+...+....+++.++++.+.+..|...+....... |.. .+.. ..-.+.+.+.+||+|+.. +.
T Consensus 260 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~----~~~~------------~~d~skak~~LGw~P~~~-l~ 322 (356)
T d1rkxa_ 260 NFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPHE----AHYL------------KLDCSKAKMQLGWHPRWN-LN 322 (356)
T ss_dssp ECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC-------C----CCCC------------CBCCHHHHHHHCCCCCCC-HH
T ss_pred ccccccccccccchhhhhhHHHhCCCccEEEcCCCCCCC----cCee------------eEcHHHHHHHHCCCcCCC-HH
Confidence 55444347899999999999999554332211111 110 0000 001356678899999985 44
Q ss_pred HHHHHhhccccccc
Q psy7538 406 ERIHRGFDVFEYYA 419 (543)
Q Consensus 406 ~~l~~~~~~~~~f~ 419 (543)
+.+.+ +++||.
T Consensus 323 egi~~---ti~wyk 333 (356)
T d1rkxa_ 323 TTLEY---IVGWHK 333 (356)
T ss_dssp HHHHH---HHHHHH
T ss_pred HHHHH---HHHHHH
Confidence 44444 555553
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.97 E-value=2.7e-30 Score=260.83 Aligned_cols=317 Identities=17% Similarity=0.222 Sum_probs=210.1
Q ss_pred EEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCCC
Q psy7538 32 SIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQLK 111 (543)
Q Consensus 32 ~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~~ 111 (543)
+|||||||||||++|+++|+++|+ +|++++|-.... ..+++..+. ...+++++.||+++.+
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~---~V~~id~~~~~~-~~~~~~~~~---------------~~~~~~~i~~Di~~~~ 62 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGI---DLIVFDNLSRKG-ATDNLHWLS---------------SLGNFEFVHGDIRNKN 62 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCCSTT-HHHHHHHHH---------------TTCCCEEEECCTTCHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCcC---EEEEEECCCccc-chhHHHHhh---------------ccCCcEEEEcccCCHH
Confidence 799999999999999999999987 778876543222 233333321 2357899999999875
Q ss_pred CCCCHHHHHHHhcC--ccEEEEcCccCCCcc---cHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCcc-ccCCC--c
Q psy7538 112 LGISEIDKKELIDN--VDIVYHVAATIRFDE---PIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYC-HPSEK--V 183 (543)
Q Consensus 112 lgls~~~~~~l~~~--vd~ViH~AA~v~~~~---~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~-~~~~~--~ 183 (543)
++..++++ +|+|||+||.+.... ......++|+.||.+|+++|.+. +++++|+.||..+ ..... +
T Consensus 63 ------~l~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-~~~~~i~~sS~~~~~~~~~~~~ 135 (338)
T d1orra_ 63 ------DVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQY-NSNCNIIYSSTNKVYGDLEQYK 135 (338)
T ss_dssp ------HHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEEEEGGGGTTCTTSC
T ss_pred ------HHHHHHHhcCCceEEeecccccccccccChHHHHHHHHHHHHHHHHhhhcc-cccccccccccccccccccccc
Confidence 78888775 599999999886543 34678899999999999999998 6666666665533 22221 1
Q ss_pred cccc--ccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCC
Q psy7538 184 LEER--TYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKE 260 (543)
Q Consensus 184 i~E~--~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~ 260 (543)
..+. ..+....+. +........ .-+.|+.+|..+|.++..... ++....++|++.+|++...
T Consensus 136 ~~~~~~~~~~~~~~~---------~~~~~~~~~------~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (338)
T d1orra_ 136 YNETETRYTCVDKPN---------GYDESTQLD------FHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQF 200 (338)
T ss_dssp EEECSSCEEETTCTT---------CBCTTSCCC------CCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCC
T ss_pred ccccccccccccccc---------CcccCCccc------cccccccccchhhhhhhhhhhccCcccccccccceeecccc
Confidence 1111 000000000 000000011 127899999999999988777 7999999999999987654
Q ss_pred CCCCCCCCCCch-HHHHHHH-----hcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCC
Q psy7538 261 PLPGWTDNINGP-TGLLIGA-----GKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDY 334 (543)
Q Consensus 261 p~~gw~d~~~g~-~~~~~~~-----~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~ 334 (543)
+... .+. ..++..+ ..+....+++++.+.+|++||+|+|++++.++.+... ..+++||+..+..+
T Consensus 201 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~~v~D~~~~~~~~l~~~~~----~~~~~~~i~~~~~~ 271 (338)
T d1orra_ 201 ATYD-----QGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANVSK----IRGNAFNIGGTIVN 271 (338)
T ss_dssp CBTT-----BCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHTHHH----HTTCEEEESSCGGG
T ss_pred cccc-----ccccchhhHHHHHHHhccCCceEEeCCCceeEeeecccchhhHHHHHHhcccc----ccCccccccccccc
Confidence 3111 111 2233322 2355667889999999999999999999999876543 24789999766558
Q ss_pred cccHHHHHHHHhhhhcCccCCCCccccCccccccchhHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHhhcc
Q psy7538 335 KITWQEICDIGKDIVTSKIPFNSTLWYPGGTMTQSRLTHFICCLLFHWIPAYFLDAVILISGNKPCLVRIQERIHRGFDV 414 (543)
Q Consensus 335 ~~t~~e~~~~i~~~~G~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~d~~~~~~G~kP~~~~~~~~l~~~~~~ 414 (543)
++++.|+++.+.+..|.+.+.......|... ..+ . .-.+.+.+.+||+|++. +.+.+++ +
T Consensus 272 ~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~---~~~-----------~--~d~~k~~~~Lg~~p~~s-l~e~i~~---t 331 (338)
T d1orra_ 272 SLSLLELFKLLEDYCNIDMRFTNLPVRESDQ---RVF-----------V--ADIKKITNAIDWSPKVS-AKDGVQK---M 331 (338)
T ss_dssp EEEHHHHHHHHHHHHTCCCCEEEECCCSSCC---SEE-----------C--BCCHHHHHHHCCCCCSC-HHHHHHH---H
T ss_pred cccHHHHHHHHHHHHCCCceeEeCCCCCCCc---Cee-----------e--ECHHHHHHHHCCCcCCC-HHHHHHH---H
Confidence 8999999999999986554433222222110 000 0 01455677899999874 4444444 4
Q ss_pred cccc
Q psy7538 415 FEYY 418 (543)
Q Consensus 415 ~~~f 418 (543)
++||
T Consensus 332 i~W~ 335 (338)
T d1orra_ 332 YDWT 335 (338)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4555
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=2.1e-27 Score=227.77 Aligned_cols=210 Identities=20% Similarity=0.192 Sum_probs=163.0
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
+++|+|+|||||||+|++|+++|+++| .+.+|++++|++.... .....++..+.+|+
T Consensus 12 m~~k~IlItGaTG~iG~~l~~~Ll~~g-~~~~v~~~~R~~~~~~----------------------~~~~~~i~~~~~D~ 68 (232)
T d2bkaa1 12 MQNKSVFILGASGETGRVLLKEILEQG-LFSKVTLIGRRKLTFD----------------------EEAYKNVNQEVVDF 68 (232)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHT-CCSEEEEEESSCCCCC----------------------SGGGGGCEEEECCG
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCC-CCCEEEEEecChhhhc----------------------ccccceeeeeeecc
Confidence 577999999999999999999999997 4558999999865432 22335778888999
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCccccc
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEER 187 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i~E~ 187 (543)
.+.+ ++..+++++|+|||+|+......+.....++|+.++.+++++|++. ++++|||+||..++...
T Consensus 69 ~~~~------~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~-~v~~fi~~Ss~~~~~~~------ 135 (232)
T d2bkaa1 69 EKLD------DYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAG-GCKHFNLLSSKGADKSS------ 135 (232)
T ss_dssp GGGG------GGGGGGSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTTC------
T ss_pred cccc------cccccccccccccccccccccccchhhhhhhcccccceeeeccccc-CccccccCCccccccCc------
Confidence 8765 7888889999999999987666667778999999999999999998 89999999998764321
Q ss_pred ccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCc-EEEEecCeeeecCCCCCCCCC
Q psy7538 188 TYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMP-CMILRPSIVVPIYKEPLPGWT 266 (543)
Q Consensus 188 ~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp-~~IlRps~V~G~~~~p~~gw~ 266 (543)
++.|+.+|..+|+.+.+. +++ ++|+||+.|+|+..+.
T Consensus 136 ----------------------------------~~~Y~~~K~~~E~~l~~~---~~~~~~IlRP~~i~G~~~~~----- 173 (232)
T d2bkaa1 136 ----------------------------------NFLYLQVKGEVEAKVEEL---KFDRYSVFRPGVLLCDRQES----- 173 (232)
T ss_dssp ----------------------------------SSHHHHHHHHHHHHHHTT---CCSEEEEEECCEEECTTGGG-----
T ss_pred ----------------------------------cchhHHHHHHhhhccccc---cccceEEecCceeecCCCcC-----
Confidence 178999999999998876 665 8999999999986542
Q ss_pred CCCCchHH-HHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeec
Q psy7538 267 DNINGPTG-LLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTS 330 (543)
Q Consensus 267 d~~~g~~~-~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s 330 (543)
.+.. ++...... ...+......||++|+|++++.++..+.. ++++.+.+
T Consensus 174 ----~~~~~~~~~~~~~-----~~~~~~~~~~I~~~dvA~a~i~~~~~~~~------~~~~i~~~ 223 (232)
T d2bkaa1 174 ----RPGEWLVRKFFGS-----LPDSWASGHSVPVVTVVRAMLNNVVRPRD------KQMELLEN 223 (232)
T ss_dssp ----SHHHHHHHHHHCS-----CCTTGGGGTEEEHHHHHHHHHHHHTSCCC------SSEEEEEH
T ss_pred ----cHHHHHHHHHhhc-----cCCcccCCCeEEHHHHHHHHHHHHhcCcc------CCeEEEcH
Confidence 1111 22222221 22334445679999999999988877654 56777654
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.94 E-value=2e-26 Score=226.23 Aligned_cols=223 Identities=15% Similarity=0.124 Sum_probs=174.9
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
.|+|||||||||||++|+++|.+.|+ +|+++.|.+ +|+.+
T Consensus 1 ~MKIlItGasGfiG~~l~~~L~~~g~---~Vi~~~r~~-------------------------------------~D~~d 40 (281)
T d1vl0a_ 1 HMKILITGANGQLGREIQKQLKGKNV---EVIPTDVQD-------------------------------------LDITN 40 (281)
T ss_dssp CEEEEEESTTSHHHHHHHHHHTTSSE---EEEEECTTT-------------------------------------CCTTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCC---EEEEeechh-------------------------------------ccCCC
Confidence 37899999999999999999999987 788887743 36666
Q ss_pred CCCCCCHHHHHHHhc--CccEEEEcCccCCCc---ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCC--C
Q psy7538 110 LKLGISEIDKKELID--NVDIVYHVAATIRFD---EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSE--K 182 (543)
Q Consensus 110 ~~lgls~~~~~~l~~--~vd~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~--~ 182 (543)
.+ +++++++ ++|+|||+|+....+ .........|+.++..+++.+.... ..++++||..+++.. .
T Consensus 41 ~~------~~~~~l~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~~~~ss~~v~~~~~~~ 112 (281)
T d1vl0a_ 41 VL------AVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG--AEIVQISTDYVFDGEAKE 112 (281)
T ss_dssp HH------HHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT--CEEEEEEEGGGSCSCCSS
T ss_pred HH------HHHHHHHHcCCCEEEeeccccccccccccchhhccccccccccccccccccc--ccccccccceeeeccccc
Confidence 54 6777776 579999999987643 3446678899999999999998762 567777777554433 3
Q ss_pred cccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCC
Q psy7538 183 VLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPL 262 (543)
Q Consensus 183 ~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~ 262 (543)
+..|...+.|. +.|+.+|..+|+.+.+. +.+.+|+||++|||+...
T Consensus 113 ~~~e~~~~~~~-----------------------------~~~~~~k~~~e~~~~~~---~~~~~i~R~~~vyG~~~~-- 158 (281)
T d1vl0a_ 113 PITEFDEVNPQ-----------------------------SAYGKTKLEGENFVKAL---NPKYYIVRTAWLYGDGNN-- 158 (281)
T ss_dssp CBCTTSCCCCC-----------------------------SHHHHHHHHHHHHHHHH---CSSEEEEEECSEESSSSC--
T ss_pred cccccccccch-----------------------------hhhhhhhhHHHHHHHHh---CCCccccceeEEeCCCcc--
Confidence 55665554443 78999999999999877 789999999999998542
Q ss_pred CCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHH
Q psy7538 263 PGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEIC 342 (543)
Q Consensus 263 ~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~ 342 (543)
....++..+..+....+. +++.+++++++|+|+++..++.... .++||++++ +++|+.|++
T Consensus 159 --------~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~D~~~~~~~~~~~~~-------~g~~~~~~~--~~~s~~e~~ 219 (281)
T d1vl0a_ 159 --------FVKTMINLGKTHDELKVV--HDQVGTPTSTVDLARVVLKVIDEKN-------YGTFHCTCK--GICSWYDFA 219 (281)
T ss_dssp --------HHHHHHHHHHHCSEEEEE--SSCEECCEEHHHHHHHHHHHHHHTC-------CEEEECCCB--SCEEHHHHH
T ss_pred --------cccchhhhhccCCceeec--CCceeccchhhhhhhhhhhhhhhcc-------cCceeEeCC--CccchHHHH
Confidence 233456666666655544 4688999999999999999987754 348999998 899999999
Q ss_pred HHHhhhhcCcc
Q psy7538 343 DIGKDIVTSKI 353 (543)
Q Consensus 343 ~~i~~~~G~~~ 353 (543)
+.+.+.+|.+.
T Consensus 220 ~~i~~~~g~~~ 230 (281)
T d1vl0a_ 220 VEIFRLTGIDV 230 (281)
T ss_dssp HHHHHHHCCCC
T ss_pred HHHHHHhCCCc
Confidence 99999996654
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.94 E-value=4.2e-26 Score=226.25 Aligned_cols=243 Identities=17% Similarity=0.176 Sum_probs=156.3
Q ss_pred EEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCCCC
Q psy7538 33 IFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQLKL 112 (543)
Q Consensus 33 VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~~l 112 (543)
|||||||||||++|+++|+++|+ .+|+++.+-..+.. ..++ . .. .. .|..+..
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~--~~V~~~d~~~~~~~-~~~~------------~-----~~-~~-----~~~~~~~- 54 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGI--TDILVVDNLKDGTK-FVNL------------V-----DL-NI-----ADYMDKE- 54 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTC--CCEEEEECCSSGGG-GHHH------------H-----TS-CC-----SEEEEHH-
T ss_pred EEEecCccHHHHHHHHHHHhCCC--CeEEEEECCCCcch-hhcc------------c-----cc-ch-----hhhccch-
Confidence 89999999999999999999985 25777654332211 0011 0 00 01 1111110
Q ss_pred CCCHHHHHHH-----hcCccEEEEcCccCCCc-ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccC-CC-cc
Q psy7538 113 GISEIDKKEL-----IDNVDIVYHVAATIRFD-EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPS-EK-VL 184 (543)
Q Consensus 113 gls~~~~~~l-----~~~vd~ViH~AA~v~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~-~~-~i 184 (543)
...... ...+++|+|+||..... .+.......|+.++.+++++++.. +++ +|+.||..+... .. ..
T Consensus 55 ----~~~~~~~~~~~~~~~~~i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~i~-~v~~ss~~~~~~~~~~~~ 128 (307)
T d1eq2a_ 55 ----DFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EIP-FLYASSAATYGGRTSDFI 128 (307)
T ss_dssp ----HHHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TCC-EEEEEEGGGGTTCCSCBC
T ss_pred ----HHHHHHhhhhcccchhhhhhhcccccccccccccccccccccccccccccccc-ccc-cccccccccccccccccc
Confidence 012222 24589999999976543 445567888999999999999987 665 566666644433 22 23
Q ss_pred cccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-cCCcEEEEecCeeeecCCCCCC
Q psy7538 185 EERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-LGMPCMILRPSIVVPIYKEPLP 263 (543)
Q Consensus 185 ~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-~~lp~~IlRps~V~G~~~~p~~ 263 (543)
+|+....|. +.|+.+|..+|.++..+.+ .+++++++||+.|||+...+-.
T Consensus 129 ~~~~~~~~~-----------------------------~~Y~~~K~~~e~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~ 179 (307)
T d1eq2a_ 129 ESREYEKPL-----------------------------NVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKG 179 (307)
T ss_dssp SSGGGCCCS-----------------------------SHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGG
T ss_pred ccccccccc-----------------------------cccccccchhhhhccccccccccccccccceeEeeccccccc
Confidence 333332222 8999999999999999988 7999999999999999764311
Q ss_pred CCCCCCCchHHHHHHHhcCceeE-EeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHH
Q psy7538 264 GWTDNINGPTGLLIGAGKGVIRS-MYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEIC 342 (543)
Q Consensus 264 gw~d~~~g~~~~~~~~~~g~~~~-~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~ 342 (543)
.+ . .....++..+..|.... ..+++...++++|++|++.++..++.... ..+||++++ ++.+++|++
T Consensus 180 ~~-~--~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~~~-------~~~~~~~~~--~~~si~~i~ 247 (307)
T d1eq2a_ 180 SM-A--SVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV-------SGIFNLGTG--RAESFQAVA 247 (307)
T ss_dssp GG-S--CHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC-------CEEEEESCS--CCBCHHHHH
T ss_pred cc-c--ccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhhcc-------ccccccccc--cchhHHHHH
Confidence 10 0 11123455566665433 45788899999999999999998887643 459999999 899999999
Q ss_pred HHHhhhh
Q psy7538 343 DIGKDIV 349 (543)
Q Consensus 343 ~~i~~~~ 349 (543)
+.+.+..
T Consensus 248 ~~i~~~~ 254 (307)
T d1eq2a_ 248 DATLAYH 254 (307)
T ss_dssp HHC----
T ss_pred HHHHHhc
Confidence 9998876
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=9.4e-24 Score=198.13 Aligned_cols=202 Identities=12% Similarity=0.103 Sum_probs=155.4
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
|.+|+|+|||||||+|++++++|+++|+ +|.+++|+.+... .....+++++.||+
T Consensus 1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~---~V~~~~R~~~~~~----------------------~~~~~~~~~~~gD~ 55 (205)
T d1hdoa_ 1 MAVKKIAIFGATGQTGLTTLAQAVQAGY---EVTVLVRDSSRLP----------------------SEGPRPAHVVVGDV 55 (205)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCGGGSC----------------------SSSCCCSEEEESCT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCcC---EEEEEEcChhhcc----------------------cccccccccccccc
Confidence 4678999999999999999999999997 8999999764321 22335789999999
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCccccc
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEER 187 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i~E~ 187 (543)
++++ ++.++++++|+|||+++....... ..++..++++++++|++. ++++||++||+.+..+......
T Consensus 56 ~d~~------~l~~al~~~d~vi~~~g~~~~~~~----~~~~~~~~~~l~~aa~~~-~v~r~i~~ss~~~~~~~~~~~~- 123 (205)
T d1hdoa_ 56 LQAA------DVDKTVAGQDAVIVLLGTRNDLSP----TTVMSEGARNIVAAMKAH-GVDKVVACTSAFLLWDPTKVPP- 123 (205)
T ss_dssp TSHH------HHHHHHTTCSEEEECCCCTTCCSC----CCHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCTTCSCG-
T ss_pred cchh------hHHHHhcCCCEEEEEeccCCchhh----hhhhHHHHHHHHHHHHhc-CCCeEEEEeeeeccCCCccccc-
Confidence 9875 899999999999999987543322 246778999999999998 8999999999876544221100
Q ss_pred ccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCCCCCC
Q psy7538 188 TYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPGWTD 267 (543)
Q Consensus 188 ~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~gw~d 267 (543)
. -..|...|..+|+++++. +++++|+||+.+++...
T Consensus 124 ----~-----------------------------~~~~~~~~~~~e~~l~~~---~~~~tiirp~~~~~~~~-------- 159 (205)
T d1hdoa_ 124 ----R-----------------------------LQAVTDDHIRMHKVLRES---GLKYVAVMPPHIGDQPL-------- 159 (205)
T ss_dssp ----G-----------------------------GHHHHHHHHHHHHHHHHT---CSEEEEECCSEEECCCC--------
T ss_pred ----c-----------------------------ccccchHHHHHHHHHHhc---CCceEEEecceecCCCC--------
Confidence 0 046888999999988765 89999999999876421
Q ss_pred CCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEee
Q psy7538 268 NINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLT 329 (543)
Q Consensus 268 ~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~ 329 (543)
.|.. .+..+++....+|+++|+|++++.+++++.. .++.+.++
T Consensus 160 -------------~~~~-~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~-----~g~~~~~s 202 (205)
T d1hdoa_ 160 -------------TGAY-TVTLDGRGPSRVISKHDLGHFMLRCLTTDEY-----DGHSTYPS 202 (205)
T ss_dssp -------------CSCC-EEESSSCSSCSEEEHHHHHHHHHHTTSCSTT-----TTCEEEEE
T ss_pred -------------cccE-EEeeCCCCCCCcCCHHHHHHHHHHHhCCCCC-----CCEEEecC
Confidence 1122 2355677888999999999999999977653 36666554
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.91 E-value=3.4e-24 Score=211.50 Aligned_cols=235 Identities=14% Similarity=0.157 Sum_probs=172.5
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
.|+|||||||||+|++++++|+++|+ +|++++|........++...+ . .....++.++.+|+.+
T Consensus 3 kkKILVtGatG~iG~~l~~~L~~~G~---~V~~l~R~~~~~~~~~~~~~~---------~----~~~~~~~~~~~~d~~~ 66 (307)
T d1qyca_ 3 RSRILLIGATGYIGRHVAKASLDLGH---PTFLLVRESTASSNSEKAQLL---------E----SFKASGANIVHGSIDD 66 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTC---CEEEECCCCCTTTTHHHHHHH---------H----HHHTTTCEEECCCTTC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC---eEEEEECCCccccchhHHHHH---------H----hhccCCcEEEEeeccc
Confidence 47899999999999999999999997 789999987665433333221 0 1112468899999998
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCccccccc
Q psy7538 110 LKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTY 189 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i~E~~y 189 (543)
.. .....+++++.|+|+++.... .++.+++++++.. +.+.+++.|+........+..+
T Consensus 67 ~~------~~~~~~~~~~~vi~~~~~~~~------------~~~~~~~~a~~~~-~~~~~~~~s~~~~~~~~~~~~~--- 124 (307)
T d1qyca_ 67 HA------SLVEAVKNVDVVISTVGSLQI------------ESQVNIIKAIKEV-GTVKRFFPSEFGNDVDNVHAVE--- 124 (307)
T ss_dssp HH------HHHHHHHTCSEEEECCCGGGS------------GGGHHHHHHHHHH-CCCSEEECSCCSSCTTSCCCCT---
T ss_pred ch------hhhhhhhhceeeeeccccccc------------chhhHHHHHHHHh-ccccceeeeccccccccccccc---
Confidence 75 677888999999999976433 3446678888887 7788888887644332211110
Q ss_pred CCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCCCCCCCC
Q psy7538 190 LPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPGWTDNI 269 (543)
Q Consensus 190 ~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~gw~d~~ 269 (543)
+ ...+...+..+|..+.+. +++++|+||+.+||+...++..+
T Consensus 125 -----~--------------------------~~~~~~~~~~~~~~~~~~---~~~~~i~r~~~v~g~~~~~~~~~---- 166 (307)
T d1qyca_ 125 -----P--------------------------AKSVFEVKAKVRRAIEAE---GIPYTYVSSNCFAGYFLRSLAQA---- 166 (307)
T ss_dssp -----T--------------------------HHHHHHHHHHHHHHHHHH---TCCBEEEECCEEHHHHTTTTTCT----
T ss_pred -----c--------------------------ccccccccccccchhhcc---CCCceecccceecCCCccchhhh----
Confidence 0 045666677777777665 89999999999999876543322
Q ss_pred CchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHHHHHhhhh
Q psy7538 270 NGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEICDIGKDIV 349 (543)
Q Consensus 270 ~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~~~i~~~~ 349 (543)
+....++....+++++++.+++||++|+|++++.++..+.. ..+.+||++++ +.+|+.|+++.+.+.+
T Consensus 167 ------~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~----~~~~~~~~~~~--~~~s~~ei~~~~~~~~ 234 (307)
T d1qyca_ 167 ------GLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRT----LNKTLYLRLPA--NTLSLNELVALWEKKI 234 (307)
T ss_dssp ------TCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGG----TTEEEECCCGG--GEEEHHHHHHHHHHHT
T ss_pred ------hhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhh----cCceeEEeCCC--CccCHHHHHHHHHHHH
Confidence 12234455566788999999999999999999999877654 12346777777 8899999999999999
Q ss_pred cCc
Q psy7538 350 TSK 352 (543)
Q Consensus 350 G~~ 352 (543)
|.+
T Consensus 235 G~~ 237 (307)
T d1qyca_ 235 DKT 237 (307)
T ss_dssp TSC
T ss_pred CCC
Confidence 665
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.91 E-value=4.3e-24 Score=212.03 Aligned_cols=242 Identities=12% Similarity=0.093 Sum_probs=175.9
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
.++|||||||||||++|+++|+++|+ +|++++|+........ .+.+ . .....+++++.+|+.+
T Consensus 3 k~KILVtGatG~iG~~l~~~L~~~G~---~V~~~~R~~~~~~~~~-~~~~---------~----~~~~~~v~~v~~d~~d 65 (312)
T d1qyda_ 3 KSRVLIVGGTGYIGKRIVNASISLGH---PTYVLFRPEVVSNIDK-VQML---------L----YFKQLGAKLIEASLDD 65 (312)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTC---CEEEECCSCCSSCHHH-HHHH---------H----HHHTTTCEEECCCSSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCC---EEEEEECCCcccchhH-HHHH---------h----hhccCCcEEEEeeccc
Confidence 46799999999999999999999997 7889999876654321 1110 0 1122578999999998
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCccccccc
Q psy7538 110 LKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERTY 189 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i~E~~y 189 (543)
.+ ++..++.++++++|+++..... .|..++.+++++|.+. +..++++.||..++.....
T Consensus 66 ~~------~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~a~~~-~~~~~v~~Ss~g~~~~~~~------ 124 (312)
T d1qyda_ 66 HQ------RLVDALKQVDVVISALAGGVLS--------HHILEQLKLVEAIKEA-GNIKRFLPSEFGMDPDIME------ 124 (312)
T ss_dssp HH------HHHHHHTTCSEEEECCCCSSSS--------TTTTTHHHHHHHHHHS-CCCSEEECSCCSSCTTSCC------
T ss_pred ch------hhhhhccCcchhhhhhhhcccc--------cchhhhhHHHHHHHHh-cCCcEEEEeeccccCCCcc------
Confidence 75 7888999999999999865332 3556678899999998 5667778887654433211
Q ss_pred CCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCCCCCCCC
Q psy7538 190 LPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPGWTDNI 269 (543)
Q Consensus 190 ~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~gw~d~~ 269 (543)
.+.. ....|..+|..+|...... +++++++||+.++|....+.+.+....
T Consensus 125 -~~~~--------------------------~~~~~~~~~~~~~~~~~~~---~~~~~i~r~~~~~g~~~~~~~~~~~~~ 174 (312)
T d1qyda_ 125 -HALQ--------------------------PGSITFIDKRKVRRAIEAA---SIPYTYVSSNMFAGYFAGSLAQLDGHM 174 (312)
T ss_dssp -CCCS--------------------------STTHHHHHHHHHHHHHHHT---TCCBCEEECCEEHHHHTTTSSCTTCCS
T ss_pred -cccc--------------------------hhhhhhHHHHHHHHhhccc---ccceEEeccceeecCCccchhhHHHHh
Confidence 1111 1167777777777765444 899999999999998765544332222
Q ss_pred CchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHHHHHhhhh
Q psy7538 270 NGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEICDIGKDIV 349 (543)
Q Consensus 270 ~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~~~i~~~~ 349 (543)
...+....+++++++.+++|+++|+|++++.++.++.. ..+.+|+++++ +.+|++|+++.+.+.+
T Consensus 175 ---------~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~----~~~~~~~~~~~--~~~s~~e~~~~~~~~~ 239 (312)
T d1qyda_ 175 ---------MPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQT----LNKTMYIRPPM--NILSQKEVIQIWERLS 239 (312)
T ss_dssp ---------SCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGG----SSSEEECCCGG--GEEEHHHHHHHHHHHH
T ss_pred ---------hhcccccccccccccccceeeHHHHHHHHHHHhcCccc----cCceEEEeCCC--cCCCHHHHHHHHHHHH
Confidence 12334455688999999999999999999999987654 12335777776 7899999999999999
Q ss_pred cCccC
Q psy7538 350 TSKIP 354 (543)
Q Consensus 350 G~~~p 354 (543)
|.+.+
T Consensus 240 g~~~~ 244 (312)
T d1qyda_ 240 EQNLD 244 (312)
T ss_dssp TCCCE
T ss_pred CCCCe
Confidence 65533
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.91 E-value=8.1e-24 Score=208.80 Aligned_cols=227 Identities=20% Similarity=0.197 Sum_probs=162.6
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|||||||||||++|++.|++.| .++.+.+..+. +.+|++++
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~g----~~v~~~~~~~~---------------------------------~~~Dl~~~ 43 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPVG----NLIALDVHSKE---------------------------------FCGDFSNP 43 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTTS----EEEEECTTCSS---------------------------------SCCCTTCH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC----CEEEEECCCcc---------------------------------ccCcCCCH
Confidence 789999999999999999999987 34555554321 23788876
Q ss_pred CCCCCHHHHHHHhc--CccEEEEcCccCCC---cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccC--CCc
Q psy7538 111 KLGISEIDKKELID--NVDIVYHVAATIRF---DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPS--EKV 183 (543)
Q Consensus 111 ~lgls~~~~~~l~~--~vd~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~--~~~ 183 (543)
+ .++.+++ ++|+||||||.+.. ........++|+.++.+++++|++. + .+++++||+.++.. ..+
T Consensus 44 ~------~~~~~i~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~~~~ss~~~~~~~~~~~ 115 (298)
T d1n2sa_ 44 K------GVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANET-G-AWVVHYSTDYVFPGTGDIP 115 (298)
T ss_dssp H------HHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTT-T-CEEEEEEEGGGSCCCTTCC
T ss_pred H------HHHHHHHHcCCCEEEEecccccccccccCccccccccccccccchhhhhcc-c-cccccccccccccCCCCCC
Confidence 4 7777776 46999999997754 3445668899999999999999987 4 56888888855443 335
Q ss_pred ccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCC
Q psy7538 184 LEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLP 263 (543)
Q Consensus 184 i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~ 263 (543)
.+|+..+.|. +.|+.+|..+|..+..+.. ...++|++..++....
T Consensus 116 ~~E~~~~~p~-----------------------------~~y~~~k~~~e~~~~~~~~---~~~~~~~~~~~~~~~~--- 160 (298)
T d1n2sa_ 116 WQETDATSPL-----------------------------NVYGKTKLAGEKALQDNCP---KHLIFRTSWVYAGKGN--- 160 (298)
T ss_dssp BCTTSCCCCS-----------------------------SHHHHHHHHHHHHHHHHCS---SEEEEEECSEECSSSC---
T ss_pred CccccccCCC-----------------------------chHhhhhhhhhhhHHhhhc---ccccccccceeeccCC---
Confidence 6776555444 8999999999999987743 4556666555543221
Q ss_pred CCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHHH
Q psy7538 264 GWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEICD 343 (543)
Q Consensus 264 gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~~ 343 (543)
.....+...+..+... ...+....++++++|+++++..++..... . +...++||++++ +.+++.++++
T Consensus 161 ------~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~~~~~~~~i~~~~~-~-~~~~~~~n~~~~--~~~~~~~~~~ 228 (298)
T d1n2sa_ 161 ------NFAKTMLRLAKERQTL--SVINDQYGAPTGAELLADCTAHAIRVALN-K-PEVAGLYHLVAG--GTTTWHDYAA 228 (298)
T ss_dssp ------CHHHHHHHHHHHCSEE--EEECSCEECCEEHHHHHHHHHHHHHHHHH-C-GGGCEEEECCCB--SCEEHHHHHH
T ss_pred ------ccchhhhhhhccccee--ecccceeecccccchHHHHHHHHHhhhhc-c-ccccccccccCC--CceecHHHHH
Confidence 1222233344444433 33456788999999999998877764322 1 124789999998 8899999999
Q ss_pred HHhhhh
Q psy7538 344 IGKDIV 349 (543)
Q Consensus 344 ~i~~~~ 349 (543)
.+.+..
T Consensus 229 ~i~~~~ 234 (298)
T d1n2sa_ 229 LVFDEA 234 (298)
T ss_dssp HHHHHH
T ss_pred HHHhhh
Confidence 988776
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.90 E-value=6.4e-24 Score=202.62 Aligned_cols=230 Identities=13% Similarity=0.103 Sum_probs=163.8
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
.++|||||||||||++++++|+++|+++ .|+++.|+++. . .....+++++.+|+++
T Consensus 3 ~~tVlVtGatG~iG~~l~~~Ll~~g~~v-~v~~~~R~~~~------~-----------------~~~~~~~~~~~~d~~~ 58 (252)
T d2q46a1 3 LPTVLVTGASGRTGQIVYKKLKEGSDKF-VAKGLVRSAQG------K-----------------EKIGGEADVFIGDITD 58 (252)
T ss_dssp CCEEEEESTTSTTHHHHHHHHHHTTTTC-EEEEEESCHHH------H-----------------HHTTCCTTEEECCTTS
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCcE-EEEEEcCCHHH------H-----------------HhccCCcEEEEeeecc
Confidence 5799999999999999999999999877 78888886521 1 1123477899999998
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCccCCCc----------------ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEe
Q psy7538 110 LKLGISEIDKKELIDNVDIVYHVAATIRFD----------------EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIS 173 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~ViH~AA~v~~~----------------~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vS 173 (543)
++ ++.++++++|+|||+|+..... ........+|+.|+.++++.+... ..+.+.+.|
T Consensus 59 ~~------~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s 131 (252)
T d2q46a1 59 AD------SINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-GVKHIVVVG 131 (252)
T ss_dssp HH------HHHHHHTTCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-TCSEEEEEE
T ss_pred cc------ccccccccceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccc-ccccccccc
Confidence 75 7889999999999999864311 112346788999999999999987 788888888
Q ss_pred cCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCe
Q psy7538 174 TAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSI 253 (543)
Q Consensus 174 T~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~ 253 (543)
+........+.... ....|...+.+.+...... +++++++||+.
T Consensus 132 ~~~~~~~~~~~~~~---------------------------------~~~~~~~~~~~~~~~~~~~---~~~~~ilRp~~ 175 (252)
T d2q46a1 132 SMGGTNPDHPLNKL---------------------------------GNGNILVWKRKAEQYLADS---GTPYTIIRAGG 175 (252)
T ss_dssp ETTTTCTTCGGGGG---------------------------------GGCCHHHHHHHHHHHHHHS---SSCEEEEEECE
T ss_pred ccccCCCCcccccc---------------------------------cccchhhhhhhhhhhhhcc---cccceeecceE
Confidence 87554332211000 0145666666666554443 89999999999
Q ss_pred eeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecCC-
Q psy7538 254 VVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSNK- 332 (543)
Q Consensus 254 V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~~- 332 (543)
|+|+.....+.+... + ........++||++|+|++++.++.++.. .+++||++++.
T Consensus 176 v~g~~~~~~~~~~~~-------------~-----~~~~~~~~~~i~~~Dva~a~~~~l~~~~~-----~g~~~~i~~~~~ 232 (252)
T d2q46a1 176 LLDKEGGVRELLVGK-------------D-----DELLQTDTKTVPRADVAEVCIQALLFEEA-----KNKAFDLGSKPE 232 (252)
T ss_dssp EECSCTTSSCEEEES-------------T-----TGGGGSSCCEEEHHHHHHHHHHHTTCGGG-----TTEEEEEEECCT
T ss_pred EECCCcchhhhhhcc-------------C-----cccccCCCCeEEHHHHHHHHHHHhCCccc-----cCcEEEEeeCCC
Confidence 999865322111000 0 00123446799999999999999988765 47899998752
Q ss_pred CCcccHHHHHHHHhhhh
Q psy7538 333 DYKITWQEICDIGKDIV 349 (543)
Q Consensus 333 ~~~~t~~e~~~~i~~~~ 349 (543)
....++.++.+++.+..
T Consensus 233 ~~~~~~~~~~~lf~~i~ 249 (252)
T d2q46a1 233 GTSTPTKDFKALFSQVT 249 (252)
T ss_dssp TTSCCCCCHHHHHTTCC
T ss_pred CCChhHHHHHHHHHHHH
Confidence 13456788877776654
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.90 E-value=7.3e-24 Score=199.77 Aligned_cols=192 Identities=16% Similarity=0.132 Sum_probs=136.3
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
.|+|||||||||||++|+++|+++|+.+ +|.++.|++.. ..+++.....|+.+
T Consensus 2 ~KkIlItGatG~iG~~lv~~L~~~~~~~-~v~~~~r~~~~--------------------------~~~~~~~~~~d~~~ 54 (212)
T d2a35a1 2 PKRVLLAGATGLTGEHLLDRILSEPTLA-KVIAPARKALA--------------------------EHPRLDNPVGPLAE 54 (212)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCC-EEECCBSSCCC--------------------------CCTTEECCBSCHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeE-EEEEEeCCchh--------------------------hcccccccccchhh
Confidence 4899999999999999999999998543 78888887532 12344433344321
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCcccccc
Q psy7538 110 LKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERT 188 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i~E~~ 188 (543)
....+...+|+||||+|.... ........+.|+.++.+++++|++. ++++|+|+||+.+.....
T Consensus 55 --------~~~~~~~~~d~vi~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~-~v~~~i~~Ss~~~~~~~~------ 119 (212)
T d2a35a1 55 --------LLPQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEM-GARHYLVVSALGADAKSS------ 119 (212)
T ss_dssp --------HGGGCCSCCSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTTCS------
T ss_pred --------hhhccccchheeeeeeeeeccccccccccccchhhhhhhcccccccc-cccccccccccccccccc------
Confidence 122334468999999987632 2334568899999999999999997 999999999986653211
Q ss_pred cCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCc-EEEEecCeeeecCCCCCCCCCC
Q psy7538 189 YLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMP-CMILRPSIVVPIYKEPLPGWTD 267 (543)
Q Consensus 189 y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp-~~IlRps~V~G~~~~p~~gw~d 267 (543)
+.|+.+|..+|+.+.+. +++ ++|+||+.|||+...+..++
T Consensus 120 ----------------------------------~~y~~~K~~~E~~l~~~---~~~~~~I~Rp~~v~G~~~~~~~~~-- 160 (212)
T d2a35a1 120 ----------------------------------IFYNRVKGELEQALQEQ---GWPQLTIARPSLLFGPREEFRLAE-- 160 (212)
T ss_dssp ----------------------------------SHHHHHHHHHHHHHTTS---CCSEEEEEECCSEESTTSCEEGGG--
T ss_pred ----------------------------------cchhHHHHHHhhhcccc---ccccceeeCCcceeCCcccccHHH--
Confidence 78999999999988765 565 99999999999876431110
Q ss_pred CCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcc
Q psy7538 268 NINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLN 316 (543)
Q Consensus 268 ~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~ 316 (543)
.+.......+ ......||++|+|++++.++.+...
T Consensus 161 ----------~~~~~~~~~~----~~~~~~i~v~DvA~ai~~~~~~~~~ 195 (212)
T d2a35a1 161 ----------ILAAPIARIL----PGKYHGIEACDLARALWRLALEEGK 195 (212)
T ss_dssp ----------GTTCCCC--------CHHHHHHHHHHHHHHHHHHTCCCS
T ss_pred ----------HHHHHHhhcc----CCCCcEEEHHHHHHHHHHHHcCCCC
Confidence 0011111111 1234569999999999998876543
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.81 E-value=2.8e-19 Score=181.03 Aligned_cols=235 Identities=13% Similarity=0.056 Sum_probs=164.8
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
+.|+|+|||||||+|++|+++|+++|+ +|++++|+.++... .. .....+++++.||+.
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~---~V~~l~R~~~~~~~----~~---------------~~~~~~v~~~~gD~~ 59 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGH---HVRAQVHSLKGLIA----EE---------------LQAIPNVTLFQGPLL 59 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTC---CEEEEESCSCSHHH----HH---------------HHTSTTEEEEESCCT
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCC---eEEEEECCcchhhh----hh---------------hcccCCCEEEEeeCC
Confidence 468999999999999999999999997 78999998654211 11 112357999999999
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccccCCCcccccc
Q psy7538 109 QLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCHPSEKVLEERT 188 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~~~~~~i~E~~ 188 (543)
++. +.++.++.++|++++...... ..|+.++.+++++|++. +++++|+.||.........
T Consensus 60 d~~-----~~~~~a~~~~~~~~~~~~~~~---------~~~~~~~~~~~~aa~~a-gv~~~v~~Ss~~~~~~~~~----- 119 (350)
T d1xgka_ 60 NNV-----PLMDTLFEGAHLAFINTTSQA---------GDEIAIGKDLADAAKRA-GTIQHYIYSSMPDHSLYGP----- 119 (350)
T ss_dssp TCH-----HHHHHHHTTCSEEEECCCSTT---------SCHHHHHHHHHHHHHHH-SCCSEEEEEECCCGGGTSS-----
T ss_pred CcH-----HHHHHHhcCCceEEeeccccc---------chhhhhhhHHHHHHHHh-CCCceEEEeeccccccCCc-----
Confidence 864 347788899999998764322 13566788999999998 7888888888743322111
Q ss_pred cCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEecCeeeecCCCCCCCCCCC
Q psy7538 189 YLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRPSIVVPIYKEPLPGWTDN 268 (543)
Q Consensus 189 y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRps~V~G~~~~p~~gw~d~ 268 (543)
.....|..+|...|..+.+. +++++++||+..++....+.......
T Consensus 120 -------------------------------~~~~~~~~~k~~~~~~~~~~---~~~~~~vr~~~~~~~~~~~~~~~~~~ 165 (350)
T d1xgka_ 120 -------------------------------WPAVPMWAPKFTVENYVRQL---GLPSTFVYAGIYNNNFTSLPYPLFQM 165 (350)
T ss_dssp -------------------------------CCCCTTTHHHHHHHHHHHTS---SSCEEEEEECEEGGGCBSSSCSSCBE
T ss_pred -------------------------------ccchhhhhhHHHHHHHHHhh---ccCceeeeeceeeccccccccccccc
Confidence 01156778888888876655 78999999999877544322111100
Q ss_pred CCchHHHHHHHhcCce-eEEeecCCcccccchH-HHHHHHHHHHhhhhcccCCCCCCcEEEeecCCCCcccHHHHHHHHh
Q psy7538 269 INGPTGLLIGAGKGVI-RSMYCKNTGMADFLPA-DVAINGVFLFTWDFLNSKESERKSVCNLTSNKDYKITWQEICDIGK 346 (543)
Q Consensus 269 ~~g~~~~~~~~~~g~~-~~~~~~~~~~~d~V~v-ddva~a~i~a~~~~~~~~~~~~~~vyni~s~~~~~~t~~e~~~~i~ 346 (543)
.....|.. ...+.+++....++++ +|+++++..++..... . ..+++|++++ +.+|+.|+++.+.
T Consensus 166 --------~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~-~--~~G~~~~~~g---~~~T~~eia~~l~ 231 (350)
T d1xgka_ 166 --------ELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQ-K--WNGHRIALTF---ETLSPVQVCAAFS 231 (350)
T ss_dssp --------EECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHH-H--HTTCEEEECS---EEECHHHHHHHHH
T ss_pred --------cccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChh-h--cCCeEEEEeC---CcCCHHHHHHHHH
Confidence 00122222 2344567788888875 8999999888865321 0 1478999876 4599999999999
Q ss_pred hhhcCcc
Q psy7538 347 DIVTSKI 353 (543)
Q Consensus 347 ~~~G~~~ 353 (543)
+.+|.+.
T Consensus 232 ~~~G~~v 238 (350)
T d1xgka_ 232 RALNRRV 238 (350)
T ss_dssp HHHTSCE
T ss_pred HHHCCcc
Confidence 9997653
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.67 E-value=3.8e-15 Score=142.35 Aligned_cols=212 Identities=14% Similarity=0.125 Sum_probs=150.7
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||++-||++++++|++.|. +|++..|+. ++++++.+ +...+..++.+|+
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~G~---~V~~~~r~~------~~~~~~~~-------------~~~~~~~~~~~Dv 61 (244)
T d1nffa_ 4 LTGKVALVSGGARGMGASHVRAMVAEGA---KVVFGDILD------EEGKAMAA-------------ELADAARYVHLDV 61 (244)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHHH-------------HTGGGEEEEECCT
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHHH-------------HhhCcceEEEeec
Confidence 6899999999999999999999999997 888999864 34433221 1224678899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHh-c--cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQ-M--KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--~~l~~~V 170 (543)
++++ +++++++ .+|++||+||.... .+.++..+++|+.|+..+.+.+.. + ++-.++|
T Consensus 62 ~~~~------~v~~~~~~~~~~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii 135 (244)
T d1nffa_ 62 TQPA------QWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSII 135 (244)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEE
Confidence 9875 5555543 58999999997643 255777899999999998876533 2 2346899
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+...... ...|+.||+..+.+.+..+. +|+.+
T Consensus 136 ~isS~~~~~~~~~--------------------------------------~~~Y~asKaal~~ltk~lA~el~~~gIrV 177 (244)
T d1nffa_ 136 NISSIEGLAGTVA--------------------------------------CHGYTATKFAVRGLTKSTALELGPSGIRV 177 (244)
T ss_dssp EECCGGGTSCCTT--------------------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred ecccccccccccc--------------------------------------ccchhhHHHHHHHHHHHHHHHhcccCEEE
Confidence 9999876533210 15899999999988877654 68999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
..+-|+.|-.+..+..+ .. ... ....-+...+|+|++++.++..... -..|+++
T Consensus 178 N~I~PG~i~T~~~~~~~----~~-------------~~~------~pl~R~~~p~diA~~v~fL~s~~s~---~itG~~i 231 (244)
T d1nffa_ 178 NSIHPGLVKTPMTDWVP----ED-------------IFQ------TALGRAAEPVEVSNLVVYLASDESS---YSTGAEF 231 (244)
T ss_dssp EEEEECCBCSGGGTTSC----TT-------------CSC------CSSSSCBCHHHHHHHHHHHHSGGGT---TCCSCEE
T ss_pred EEEeeCCccChhHhhhh----HH-------------HHh------ccccCCCCHHHHHHHHHHHhChhhC---CCcCCEE
Confidence 99999987554332111 10 000 1112356789999998887754332 1358888
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
.+.+|
T Consensus 232 ~vDGG 236 (244)
T d1nffa_ 232 VVDGG 236 (244)
T ss_dssp EESTT
T ss_pred EECCC
Confidence 88776
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.66 E-value=7.8e-15 Score=140.95 Aligned_cols=216 Identities=13% Similarity=0.058 Sum_probs=149.4
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||++-||++++++|++.|. +|++..|+. +++++..+ ....++.++.+|+
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~Ga---~V~~~~r~~------~~~~~~~~-------------~~~~~~~~~~~Dv 60 (254)
T d1hdca_ 3 LSGKTVIITGGARGLGAEAARQAVAAGA---RVVLADVLD------EEGAATAR-------------ELGDAARYQHLDV 60 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHHH-------------TTGGGEEEEECCT
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHHH-------------HhCCceEEEEccc
Confidence 5899999999999999999999999986 888998864 34443321 2235788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ +++++++ .+|++||+|+.... .+.++..+++|+.|+..+.+.+... ++-.++|
T Consensus 61 ~~~~------~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II 134 (254)
T d1hdca_ 61 TIEE------DWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIV 134 (254)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeec
Confidence 9875 6666553 68999999997542 2456778999999999998877532 2457999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... ....|+.||+..+.+.+..+. +|+.+
T Consensus 135 ~isS~~~~~~~~--------------------------------------~~~~Y~asKaal~~lt~~lA~e~a~~gIrV 176 (254)
T d1hdca_ 135 NISSAAGLMGLA--------------------------------------LTSSYGASKWGVRGLSKLAAVELGTDRIRV 176 (254)
T ss_dssp EECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred ccccchhccccc--------------------------------------chhhHHHHHHHHHHHHHHHHHHhCCCceEE
Confidence 999987643211 016899999999988877654 68999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccc-c-chHHHHHHHHHHHhhhhcccCCCCCCc
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMAD-F-LPADVAINGVFLFTWDFLNSKESERKS 324 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d-~-V~vddva~a~i~a~~~~~~~~~~~~~~ 324 (543)
..+.|+.|-.+ +............. ...... + ...+|+|++++.++..... -..|+
T Consensus 177 N~I~PG~v~T~-----------------~~~~~~~~~~~~~~--~~~pl~R~g~~PedvA~~v~fL~S~~a~---~itG~ 234 (254)
T d1hdca_ 177 NSVHPGMTYTP-----------------MTAETGIRQGEGNY--PNTPMGRVGNEPGEIAGAVVKLLSDTSS---YVTGA 234 (254)
T ss_dssp EEEEECSBCCH-----------------HHHHHTCCCSTTSC--TTSTTSSCB-CHHHHHHHHHHHHSGGGT---TCCSC
T ss_pred EEeeeCcccCc-----------------cchhcCHHHHHHHH--hCCCCCCCCCCHHHHHHHHHHHhchhhC---CCCCc
Confidence 99999977432 12211111100000 000011 1 2468999998887754432 13588
Q ss_pred EEEeecC
Q psy7538 325 VCNLTSN 331 (543)
Q Consensus 325 vyni~s~ 331 (543)
++.+.+|
T Consensus 235 ~i~vDGG 241 (254)
T d1hdca_ 235 ELAVDGG 241 (254)
T ss_dssp EEEESTT
T ss_pred eEEeCCC
Confidence 9999876
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.64 E-value=2.3e-15 Score=144.29 Aligned_cols=221 Identities=10% Similarity=0.092 Sum_probs=146.8
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
.++||+++||||++-||++++++|++.|. +|.+..|+++. .+..+++ +..++.+|
T Consensus 2 ~l~GK~alITGas~GIG~aia~~la~~G~---~V~~~~~~~~~---~~~~~~~-------------------~~~~~~~D 56 (248)
T d2d1ya1 2 LFAGKGVLVTGGARGIGRAIAQAFAREGA---LVALCDLRPEG---KEVAEAI-------------------GGAFFQVD 56 (248)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSTTH---HHHHHHH-------------------TCEEEECC
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHHc-------------------CCeEEEEe
Confidence 57999999999999999999999999997 88899987532 2211111 34578899
Q ss_pred CCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceE
Q psy7538 107 ITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCF 169 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~ 169 (543)
+++++ +++++++ .+|++||+||.... .+.++..+++|+.|+.++.+++... ++-.++
T Consensus 57 v~~~~------~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~I 130 (248)
T d2d1ya1 57 LEDER------ERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAI 130 (248)
T ss_dssp TTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEE
T ss_pred CCCHH------HHHHHHHHHHHhcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccc
Confidence 99875 5555543 68999999997542 2456778999999999998888542 234699
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+..... ....|+.||+..+.+.+..+. +|+.
T Consensus 131 i~isS~~~~~~~~--------------------------------------~~~~Y~asKaal~~ltk~lA~el~~~gIr 172 (248)
T d2d1ya1 131 VNVASVQGLFAEQ--------------------------------------ENAAYNASKGGLVNLTRSLALDLAPLRIR 172 (248)
T ss_dssp EEECCGGGTSBCT--------------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred ccccccccccccc--------------------------------------ccchhHHHHHHHHHHHHHHHHHhhhhCcE
Confidence 9999986643211 016899999999988876554 6899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
+..+.|+.|-.+.... .......+......... .....-+...+|+++++..++..... -..|++
T Consensus 173 VN~I~PG~v~T~~~~~---~~~~~~~~~~~~~~~~~---------~~pl~R~~~pedia~~v~fL~S~~s~---~itG~~ 237 (248)
T d2d1ya1 173 VNAVAPGAIATEAVLE---AIALSPDPERTRRDWED---------LHALRRLGKPEEVAEAVLFLASEKAS---FITGAI 237 (248)
T ss_dssp EEEEEECSBCCHHHHH---HHC--------CHHHHT---------TSTTSSCBCHHHHHHHHHHHHSGGGT---TCCSCE
T ss_pred EEEEeeCCCCCchHHH---HhhcCCCHHHHHHHHHh---------cCCCCCCcCHHHHHHHHHHHhCchhc---CCCCcE
Confidence 9999998774321000 00000000000011111 11112245689999998887754332 135888
Q ss_pred EEeecC
Q psy7538 326 CNLTSN 331 (543)
Q Consensus 326 yni~s~ 331 (543)
+.+.+|
T Consensus 238 i~vDGG 243 (248)
T d2d1ya1 238 LPVDGG 243 (248)
T ss_dssp EEESTT
T ss_pred EEcCcC
Confidence 988776
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.63 E-value=1.1e-14 Score=139.11 Aligned_cols=219 Identities=11% Similarity=0.157 Sum_probs=153.3
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
+++||+++||||++-||++++++|++.|. +|.+..|++ ++++++. ++ ..++..+.+|
T Consensus 4 ~L~GK~~lITGas~GIG~aia~~la~~G~---~V~~~~r~~------~~l~~~~---------~~-----~~~~~~~~~D 60 (244)
T d1pr9a_ 4 FLAGRRVLVTGAGKGIGRGTVQALHATGA---RVVAVSRTQ------ADLDSLV---------RE-----CPGIEPVCVD 60 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH---------HH-----STTCEEEECC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCC---EEEEEECCH------HHHHHHH---------Hh-----cCCCeEEEEe
Confidence 57999999999999999999999999997 888888863 4444331 11 2357788999
Q ss_pred CCCCCCCCCHHHHHHHhc---CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHh-c---cCCceEEEE
Q psy7538 107 ITQLKLGISEIDKKELID---NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQ-M---KNLKCFTYI 172 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~---~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-~---~~l~~~V~v 172 (543)
+++++ +++++++ .+|++||+|+.... .+.++..+++|+.|+..+.+.+.. + ++-.++|++
T Consensus 61 v~d~~------~v~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~i 134 (244)
T d1pr9a_ 61 LGDWE------ATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNV 134 (244)
T ss_dssp TTCHH------HHHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred CCCHH------HHHHHHHHhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeec
Confidence 99875 6777766 58999999997643 255677899999999988887643 2 245799999
Q ss_pred ecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEE
Q psy7538 173 STAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMI 248 (543)
Q Consensus 173 ST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~I 248 (543)
||..+...... ...|+.||+..+.+.+..+. +++.+..
T Consensus 135 sS~~~~~~~~~--------------------------------------~~~Y~asKaal~~lt~~lA~el~~~gIrvN~ 176 (244)
T d1pr9a_ 135 SSQCSQRAVTN--------------------------------------HSVYCSTKGALDMLTKVMALELGPHKIRVNA 176 (244)
T ss_dssp CCGGGTSCCTT--------------------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred ccccccccccc--------------------------------------hhhhhhhHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 99876432210 15899999999998877654 6899999
Q ss_pred EecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEe
Q psy7538 249 LRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNL 328 (543)
Q Consensus 249 lRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni 328 (543)
+.|+.|-.+..+. ............... ..--+...+|+|++++.++..... -..|++..+
T Consensus 177 I~PG~v~T~~~~~-------~~~~~~~~~~~~~~~---------pl~R~~~peevA~~v~fL~S~~a~---~itG~~i~v 237 (244)
T d1pr9a_ 177 VNPTVVMTSMGQA-------TWSDPHKAKTMLNRI---------PLGKFAEVEHVVNAILFLLSDRSG---MTTGSTLPV 237 (244)
T ss_dssp EEECCBCSHHHHT-------TSCSHHHHHHHHTTC---------TTCSCBCHHHHHHHHHHHHSGGGT---TCCSCEEEE
T ss_pred EeeCcCcChHHhh-------hccChHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCchhC---CcCCcEEEE
Confidence 9999885442211 111111222222211 112256689999998877754432 135788888
Q ss_pred ecC
Q psy7538 329 TSN 331 (543)
Q Consensus 329 ~s~ 331 (543)
.+|
T Consensus 238 DGG 240 (244)
T d1pr9a_ 238 EGG 240 (244)
T ss_dssp STT
T ss_pred Ccc
Confidence 765
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.63 E-value=7.8e-15 Score=140.52 Aligned_cols=220 Identities=12% Similarity=0.086 Sum_probs=146.9
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||++-||+.++++|++.|. +|.+..|.+.. ..++.. .....++.++.+|+
T Consensus 3 L~gKvalVTGas~GIG~aia~~la~~Ga---~V~~~~~~~~~-----~~~~~~-------------~~~g~~~~~~~~Dv 61 (247)
T d2ew8a1 3 LKDKLAVITGGANGIGRAIAERFAVEGA---DIAIADLVPAP-----EAEAAI-------------RNLGRRVLTVKCDV 61 (247)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCCH-----HHHHHH-------------HHTTCCEEEEECCT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCchH-----HHHHHH-------------HHcCCcEEEEEeeC
Confidence 7899999999999999999999999997 78888887531 111111 11235788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+..+.+++... .+-.++|
T Consensus 62 s~~~------~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv 135 (247)
T d2ew8a1 62 SQPG------DVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRII 135 (247)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCcc
Confidence 9876 6665543 68999999997542 2557788999999999988877542 2446899
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... ....|+.||+..+.+.+..+. +|+.+
T Consensus 136 ~isS~~~~~~~~--------------------------------------~~~~Y~asKaal~~ltk~lA~ela~~gIrV 177 (247)
T d2ew8a1 136 NLTSTTYWLKIE--------------------------------------AYTHYISTKAANIGFTRALASDLGKDGITV 177 (247)
T ss_dssp EECCGGGGSCCS--------------------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred ccccchhcccCc--------------------------------------ccccchhhhccHHHHHHHHHHHhcccCeEE
Confidence 999987643211 015899999998888876554 68999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
..+.|+.|-.+..+... ....... .........-+...+|+|++++.++..... -..|++.
T Consensus 178 N~I~PG~i~T~~~~~~~--------~~~~~~~--------~~~~~~~l~r~~~pedvA~~v~fL~S~~s~---~itG~~i 238 (247)
T d2ew8a1 178 NAIAPSLVRTATTEASA--------LSAMFDV--------LPNMLQAIPRLQVPLDLTGAAAFLASDDAS---FITGQTL 238 (247)
T ss_dssp EEEEECCC----------------------------------CTTSSSCSCCCTHHHHHHHHHHTSGGGT---TCCSCEE
T ss_pred EEEeeCCCCCccccccc--------cchhHHH--------HHHHhccCCCCCCHHHHHHHHHHHhCchhc---CCcCCeE
Confidence 99999987544322100 0000000 000001111244578999999887754432 1358888
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
.+.+|
T Consensus 239 ~vDGG 243 (247)
T d2ew8a1 239 AVDGG 243 (247)
T ss_dssp EESSS
T ss_pred EECCC
Confidence 88766
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.63 E-value=3.4e-15 Score=142.14 Aligned_cols=209 Identities=11% Similarity=0.112 Sum_probs=144.9
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||++-||++++++|++.|. +|++..|+.+. .+++..+.+|+
T Consensus 5 l~gK~~lITGas~GIG~aia~~la~~Ga---~V~~~~r~~~~---------------------------~~~~~~~~~Dv 54 (237)
T d1uzma1 5 FVSRSVLVTGGNRGIGLAIAQRLAADGH---KVAVTHRGSGA---------------------------PKGLFGVEVDV 54 (237)
T ss_dssp CCCCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSSCC---------------------------CTTSEEEECCT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCcch---------------------------hcCceEEEEec
Confidence 6899999999999999999999999997 88999997542 24667899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ +++++++ .+|++||+||.... .+.++..+++|+.|+..+.+.+... .+-.++|
T Consensus 55 ~~~~------~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv 128 (237)
T d1uzma1 55 TDSD------AVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMI 128 (237)
T ss_dssp TCHH------HHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHH------HHHHHHHHHHHhcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceE
Confidence 9876 5555543 58999999996532 3557778999999988887655431 2456999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... ....|+.||+..+.+.+..+. +|+.+
T Consensus 129 ~isS~~~~~~~~--------------------------------------~~~~Y~asKaal~~lt~~lA~e~~~~gIrV 170 (237)
T d1uzma1 129 FIGSVSGLWGIG--------------------------------------NQANYAASKAGVIGMARSIARELSKANVTA 170 (237)
T ss_dssp EECCCCC-------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred EEcchhhccCCc--------------------------------------ccHHHHHHHHHHHHHHHHHHhhhhcCCcee
Confidence 999986643211 115899999998888876554 68999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
..+.|+.|-.+..+.. +........... ...-+...+|+|++++.++..... -..|++.
T Consensus 171 N~I~PG~v~T~~~~~~---------~~~~~~~~~~~~---------pl~R~~~pedvA~~v~fL~S~~s~---~itG~~i 229 (237)
T d1uzma1 171 NVVAPGYIDTDMTRAL---------DERIQQGALQFI---------PAKRVGTPAEVAGVVSFLASEDAS---YISGAVI 229 (237)
T ss_dssp EEEEECSBCCHHHHHS---------CHHHHHHHGGGC---------TTCSCBCHHHHHHHHHHHHSGGGT---TCCSCEE
T ss_pred eeeeeCcCCChhhhcc---------CHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCchhc---CCcCCeE
Confidence 9999997744321110 011111111111 111245679999998887754432 1358888
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
.+.+|
T Consensus 230 ~vdGG 234 (237)
T d1uzma1 230 PVDGG 234 (237)
T ss_dssp EESTT
T ss_pred EECCC
Confidence 88765
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.62 E-value=8.3e-15 Score=140.92 Aligned_cols=220 Identities=14% Similarity=0.126 Sum_probs=150.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+||||||++-||..++++|+++|. +|+++.|..... +.+.++ .. .....++.++.+|+
T Consensus 3 l~gK~vlITGgs~GIG~~~A~~la~~G~---~vii~~r~~~~~---~~~~~~---------~~---~~~~~~~~~~~~d~ 64 (254)
T d1sbya1 3 LTNKNVIFVAALGGIGLDTSRELVKRNL---KNFVILDRVENP---TALAEL---------KA---INPKVNITFHTYDV 64 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCC---SEEEEEESSCCH---HHHHHH---------HH---HCTTSEEEEEECCT
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCC---EEEEEECCcccH---HHHHHH---------Hh---hCCCCCEEEEEeec
Confidence 6899999999999999999999999986 678888876542 222221 11 12335789999999
Q ss_pred CCCCCCCCHHHHHHHh-------cCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHh-c-----cCCceEEEEec
Q psy7538 108 TQLKLGISEIDKKELI-------DNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQ-M-----KNLKCFTYIST 174 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~-~-----~~l~~~V~vST 174 (543)
+.+. ++++.++ .++|++||+||... ++.++..+++|+.|+.++.+++.. + +.-.++|++||
T Consensus 65 ~~~~-----~~~~~~~~~~~~~~g~iDilvnnAG~~~-~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS 138 (254)
T d1sbya1 65 TVPV-----AESKKLLKKIFDQLKTVDILINGAGILD-DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICS 138 (254)
T ss_dssp TSCH-----HHHHHHHHHHHHHHSCCCEEEECCCCCC-TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECC
T ss_pred CCCH-----HHHHHHHHHHHHHcCCCCEEEeCCCCCC-HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEec
Confidence 8542 2333332 36899999999765 577899999999999999887754 2 12357999999
Q ss_pred CccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEEEe
Q psy7538 175 AYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMILR 250 (543)
Q Consensus 175 ~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~IlR 250 (543)
..+..... ....|+.||+....+.+..+. +++.+..+.
T Consensus 139 ~~~~~~~~--------------------------------------~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~ 180 (254)
T d1sbya1 139 VTGFNAIH--------------------------------------QVPVYSASKAAVVSFTNSLAKLAPITGVTAYSIN 180 (254)
T ss_dssp GGGTSCCT--------------------------------------TSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEE
T ss_pred hhhccCCC--------------------------------------CCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEE
Confidence 87643211 015899999998888876654 689999999
Q ss_pred cCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeec
Q psy7538 251 PSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTS 330 (543)
Q Consensus 251 ps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s 330 (543)
|+.|..+..+-...|.+.. ..+.... ......+.+++|++++.++.... .|.++.+..
T Consensus 181 PG~v~T~~~~~~~~~~~~~----~~~~~~~------------~~~~~~~~e~va~~~~~~~~~~~------tG~vi~vdg 238 (254)
T d1sbya1 181 PGITRTPLVHTFNSWLDVE----PRVAELL------------LSHPTQTSEQCGQNFVKAIEANK------NGAIWKLDL 238 (254)
T ss_dssp ECSEESHHHHSCCCGGGSC----TTHHHHH------------TTSCCEEHHHHHHHHHHHHHHCC------TTCEEEEET
T ss_pred eCCCcCccccccccchhHH----HHHHhcc------------ccCCCCCHHHHHHHHHHhhhCCC------CCCEEEECC
Confidence 9988654211111111000 0111111 11234478999999888776543 488998887
Q ss_pred C
Q psy7538 331 N 331 (543)
Q Consensus 331 ~ 331 (543)
|
T Consensus 239 G 239 (254)
T d1sbya1 239 G 239 (254)
T ss_dssp T
T ss_pred C
Confidence 6
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.61 E-value=5.1e-15 Score=141.47 Aligned_cols=217 Identities=14% Similarity=0.117 Sum_probs=150.0
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||++-||++++++|++.|. +|.+..|++ ++++++.+ . ...+...+.+|+
T Consensus 2 l~gK~alITGas~GIG~a~a~~l~~~G~---~Vv~~~r~~------~~l~~~~~-----~--------~~~~~~~~~~Dv 59 (243)
T d1q7ba_ 2 FEGKIALVTGASRGIGRAIAETLAARGA---KVIGTATSE------NGAQAISD-----Y--------LGANGKGLMLNV 59 (243)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEESSH------HHHHHHHH-----H--------HGGGEEEEECCT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCC---EEEEEeCCH------HHHHHHHH-----H--------hCCCCcEEEEEe
Confidence 5899999999999999999999999997 788888863 34433321 1 123577889999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ +++++++ .+|++||+|+.... .+.++..+++|+.|+..+.+.+... ++-.++|
T Consensus 60 ~~~~------~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II 133 (243)
T d1q7ba_ 60 TDPA------SIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRII 133 (243)
T ss_dssp TCHH------HHHHHHHHHHHHTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred cCHH------HhhhhhhhhhcccCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEee
Confidence 9875 5555543 58999999987542 2456778999999999998887432 2446899
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... ....|+.||+..+.+.+..+. +|+.+
T Consensus 134 ~isS~~~~~~~~--------------------------------------~~~~Y~asKaal~~lt~~lA~ela~~gIrV 175 (243)
T d1q7ba_ 134 TIGSVVGTMGNG--------------------------------------GQANYAAAKAGLIGFSKSLAREVASRGITV 175 (243)
T ss_dssp EECCHHHHHCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred eecchhhcCCCC--------------------------------------CCHHHHHHHHHHHHHHHHHHHHhCccCeEE
Confidence 999986643211 016899999999988877654 68999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
..+.|+.|-.+..+ ... + .....+.... ...-+...+|+|+++..++..... -..|++.
T Consensus 176 N~I~PG~i~T~~~~-------~~~-~-~~~~~~~~~~---------pl~R~~~pedvA~~v~fL~S~~s~---~itGq~i 234 (243)
T d1q7ba_ 176 NVVAPGFIETDMTR-------ALS-D-DQRAGILAQV---------PAGRLGGAQEIANAVAFLASDEAA---YITGETL 234 (243)
T ss_dssp EEEEECSBCCHHHH-------TSC-H-HHHHHHHTTC---------TTSSCBCHHHHHHHHHHHHSGGGT---TCCSCEE
T ss_pred EEEecceEechhhh-------hhh-h-hHHHHHHhcC---------CCCCCCCHHHHHHHHHHHhCchhc---CCcCCeE
Confidence 99999977433211 111 1 1112222211 112345789999998887754432 1358888
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
++.+|
T Consensus 235 ~vdGG 239 (243)
T d1q7ba_ 235 HVNGG 239 (243)
T ss_dssp EESTT
T ss_pred EECCC
Confidence 88766
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.61 E-value=1.4e-14 Score=138.35 Aligned_cols=218 Identities=13% Similarity=0.153 Sum_probs=150.4
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||++-||+.++++|++.|. +|.+..|+. ++++++. + ...++..+.+|+
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~Ga---~V~~~~r~~------~~l~~~~---------~-----~~~~~~~~~~Dv 59 (242)
T d1cyda_ 3 FSGLRALVTGAGKGIGRDTVKALHASGA---KVVAVTRTN------SDLVSLA---------K-----ECPGIEPVCVDL 59 (242)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH---------H-----HSTTCEEEECCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHH---------H-----hcCCCeEEEEeC
Confidence 5899999999999999999999999997 888888864 3343321 1 124678899999
Q ss_pred CCCCCCCCHHHHHHHhc---CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHh-c---cCCceEEEEe
Q psy7538 108 TQLKLGISEIDKKELID---NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQ-M---KNLKCFTYIS 173 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~---~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-~---~~l~~~V~vS 173 (543)
++++ +++++++ ++|++||+||.... .+.++..+++|+.|+..+.+.+.. + +.-.++|++|
T Consensus 60 ~~~~------~v~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~is 133 (242)
T d1cyda_ 60 GDWD------ATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVS 133 (242)
T ss_dssp TCHH------HHHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEEC
T ss_pred CCHH------HHHHHHHHcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccc
Confidence 9875 6777776 58999999997543 245677899999999999887643 1 2346899999
Q ss_pred cCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEEE
Q psy7538 174 TAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMIL 249 (543)
Q Consensus 174 T~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~Il 249 (543)
|..+...... ...|+.+|+..+.+.+..+. +|+.+..+
T Consensus 134 S~~~~~~~~~--------------------------------------~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I 175 (242)
T d1cyda_ 134 SMVAHVTFPN--------------------------------------LITYSSTKGAMTMLTKAMAMELGPHKIRVNSV 175 (242)
T ss_dssp CGGGTSCCTT--------------------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred hhhccccCCc--------------------------------------cccccchHHHHHHHHHHHHHHhCccCeecccC
Confidence 9865432110 15899999999998887654 68999999
Q ss_pred ecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEee
Q psy7538 250 RPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLT 329 (543)
Q Consensus 250 Rps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~ 329 (543)
-|+.|-.+..+. ..........+.... ...-+...+|+|++++.++..... -..|+++.+.
T Consensus 176 ~PG~i~T~~~~~-------~~~~~~~~~~~~~~~---------pl~R~~~peeva~~v~fL~S~~s~---~itG~~i~vD 236 (242)
T d1cyda_ 176 NPTVVLTDMGKK-------VSADPEFARKLKERH---------PLRKFAEVEDVVNSILFLLSDRSA---STSGGGILVD 236 (242)
T ss_dssp EECCBTTHHHHH-------HTCCHHHHHHHHHHS---------TTSSCBCHHHHHHHHHHHHSGGGT---TCCSSEEEES
T ss_pred CCCCccCHHHHh-------hcCCHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCchhc---CcCCceEEeC
Confidence 998774332110 001111222222111 112345689999998887754332 1358888887
Q ss_pred cC
Q psy7538 330 SN 331 (543)
Q Consensus 330 s~ 331 (543)
+|
T Consensus 237 GG 238 (242)
T d1cyda_ 237 AG 238 (242)
T ss_dssp TT
T ss_pred cc
Confidence 65
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.61 E-value=7.1e-14 Score=133.29 Aligned_cols=214 Identities=13% Similarity=0.082 Sum_probs=147.6
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||++-||+.++++|++.|. +|++..|+. +++++..+ .-+..++.+|+
T Consensus 3 L~gK~~lITGas~GIG~aia~~l~~~G~---~V~~~~r~~------~~l~~~~~---------------~~~~~~~~~Dv 58 (242)
T d1ulsa_ 3 LKDKAVLITGAAHGIGRATLELFAKEGA---RLVACDIEE------GPLREAAE---------------AVGAHPVVMDV 58 (242)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHHH---------------TTTCEEEECCT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHHH---------------HcCCeEEEEec
Confidence 5899999999999999999999999997 889999863 44444321 12467889999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ +++++++ ++|++||+||.... .+.++..+++|+.|+..+.+.+... .+-..++
T Consensus 59 ~~~~------~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~ 132 (242)
T d1ulsa_ 59 ADPA------SVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIV 132 (242)
T ss_dssp TCHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEE
T ss_pred CCHH------HHHHHHHHHHHhcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceee
Confidence 9876 6665543 58999999997542 2456778999999999998887543 2345667
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
.+||+...+... ...|+.||+..+.+.+..+. +|+.+
T Consensus 133 ~~ss~~~~~~~~---------------------------------------~~~Y~asKaal~~ltk~lA~ela~~gIrV 173 (242)
T d1ulsa_ 133 LTASRVYLGNLG---------------------------------------QANYAASMAGVVGLTRTLALELGRWGIRV 173 (242)
T ss_dssp EECCGGGGCCTT---------------------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred eeccccccCCCC---------------------------------------CcchHHHHHHHHHHHHHHHHHHhhhCcEE
Confidence 777753322110 16899999999988877654 68999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
..+.|+.|-.+..+.. +...........+ ..-+...+|+|+++..++..... -..|++.
T Consensus 174 N~I~PG~v~T~~~~~~---------~~~~~~~~~~~~p---------l~R~~~pedia~~v~fL~S~~s~---~itG~~i 232 (242)
T d1ulsa_ 174 NTLAPGFIETRMTAKV---------PEKVREKAIAATP---------LGRAGKPLEVAYAALFLLSDESS---FITGQVL 232 (242)
T ss_dssp EEEEECSBCCTTTSSS---------CHHHHHHHHHTCT---------TCSCBCHHHHHHHHHHHHSGGGT---TCCSCEE
T ss_pred EEEeeCcccChhhhcC---------CHHHHHHHHhcCC---------CCCCCCHHHHHHHHHHHhchhhC---CCCCcEE
Confidence 9999998855432211 1122222222111 11244678999998887754332 1358888
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
.+.+|
T Consensus 233 ~vDGG 237 (242)
T d1ulsa_ 233 FVDGG 237 (242)
T ss_dssp EESTT
T ss_pred EECCC
Confidence 88776
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.60 E-value=1.1e-14 Score=140.52 Aligned_cols=223 Identities=12% Similarity=0.047 Sum_probs=150.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||++-||++++++|++.|. +|.+..|++. +.++++ .+.++ ....++..+.+|+
T Consensus 5 L~gK~alITGas~GIG~aia~~la~~G~---~Vv~~~r~~~-----~~~~~~-----~~~~~-----~~g~~~~~~~~Dv 66 (261)
T d1geea_ 5 LEGKVVVITGSSTGLGKSMAIRFATEKA---KVVVNYRSKE-----DEANSV-----LEEIK-----KVGGEAIAVKGDV 66 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCH-----HHHHHH-----HHHHH-----HTTCEEEEEECCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCcH-----HHHHHH-----HHHHH-----hcCCcEEEEEccC
Confidence 6899999999999999999999999987 8889998752 222221 11122 1235788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHh-c---cCCceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQ-M---KNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-~---~~l~~~ 169 (543)
++++ +++++++ ++|++||+||.... .+.++..+++|+.|+..+.+.+.. + +.-..+
T Consensus 67 t~~~------~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~I 140 (261)
T d1geea_ 67 TVES------DVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTV 140 (261)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEE
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccc
Confidence 9876 5665543 68999999997643 245677899999999888877643 2 223458
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+..... ....|+.||+..+.+.+..+. +|+.
T Consensus 141 v~isS~~~~~~~~--------------------------------------~~~~Y~asKaal~~lt~~lA~e~~~~gIr 182 (261)
T d1geea_ 141 INMSSVHEKIPWP--------------------------------------LFVHYAASKGGMKLMTETLALEYAPKGIR 182 (261)
T ss_dssp EEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred cccccchhcccCc--------------------------------------cccccccCCccchhhHHHHHHHhhhhCcE
Confidence 8999986643211 015899999999988877654 6899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
+..+.|+.|-.+... ...........+.+.. ...-+...+|+|++++.++..... -..|++
T Consensus 183 VN~I~PG~v~T~~~~-------~~~~~~~~~~~~~~~~---------pl~R~~~pediA~~v~fL~S~~s~---~itG~~ 243 (261)
T d1geea_ 183 VNNIGPGAINTPINA-------EKFADPEQRADVESMI---------PMGYIGEPEEIAAVAAWLASSEAS---YVTGIT 243 (261)
T ss_dssp EEEEEECSBCSGGGH-------HHHHSHHHHHHHHTTC---------TTSSCBCHHHHHHHHHHHHSGGGT---TCCSCE
T ss_pred EEEEeeCcCcCHhHh-------hhcCCHHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHhCchhc---CCcCCe
Confidence 999999987543211 0000011112222111 111245679999999887754432 135889
Q ss_pred EEeecC
Q psy7538 326 CNLTSN 331 (543)
Q Consensus 326 yni~s~ 331 (543)
+.+.+|
T Consensus 244 i~vDGG 249 (261)
T d1geea_ 244 LFADGG 249 (261)
T ss_dssp EEESTT
T ss_pred EEECCC
Confidence 988877
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.60 E-value=9.1e-15 Score=140.70 Aligned_cols=221 Identities=13% Similarity=0.083 Sum_probs=151.6
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||++-||++++++|++.|. +|++..|+. +++++.. +.++. ...++.++.+|+
T Consensus 9 L~gK~alITGas~GIG~aia~~la~~Ga---~V~~~~r~~------~~~~~~~-----~~l~~-----~g~~~~~~~~Dv 69 (255)
T d1fmca_ 9 LDGKCAIITGAGAGIGKEIAITFATAGA---SVVVSDINA------DAANHVV-----DEIQQ-----LGGQAFACRCDI 69 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTTTC---EEEEEESCH------HHHHHHH-----HHHHH-----TTCCEEEEECCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHH-----HHHHH-----cCCcEEEEEccC
Confidence 5899999999999999999999999997 888888864 3333221 11221 235788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFTY 171 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~ 171 (543)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+..+.+.+... .+-.++|+
T Consensus 70 s~~~------~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~ 143 (255)
T d1fmca_ 70 TSEQ------ELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILT 143 (255)
T ss_dssp TCHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccccccccc
Confidence 9875 5555543 68999999996532 2456778999999999888766432 13458899
Q ss_pred EecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEE
Q psy7538 172 ISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCM 247 (543)
Q Consensus 172 vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~ 247 (543)
+||..+..... ....|+.||+..+.+.+..+. +|+.+.
T Consensus 144 isS~~~~~~~~--------------------------------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN 185 (255)
T d1fmca_ 144 ITSMAAENKNI--------------------------------------NMTSYASSKAAASHLVRNMAFDLGEKNIRVN 185 (255)
T ss_dssp ECCGGGTCCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEE
T ss_pred ccccchhcccc--------------------------------------ccccchhHHHHHHHHHHHHHHHhCccCeEEE
Confidence 99986643211 116899999999988877654 689999
Q ss_pred EEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEE
Q psy7538 248 ILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCN 327 (543)
Q Consensus 248 IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyn 327 (543)
.+-|+.|-.+..+ ....+ .......+..+ ..-+...+|+|+++..++..... -..|++..
T Consensus 186 ~I~PG~i~T~~~~-------~~~~~-e~~~~~~~~~p---------l~R~g~pedvA~~v~fL~S~~s~---~itG~~i~ 245 (255)
T d1fmca_ 186 GIAPGAILTDALK-------SVITP-EIEQKMLQHTP---------IRRLGQPQDIANAALFLCSPAAS---WVSGQILT 245 (255)
T ss_dssp EEEECSBCSHHHH-------TTCCH-HHHHHHHHTCS---------SCSCBCHHHHHHHHHHHHSGGGT---TCCSCEEE
T ss_pred EeeeCcCcChHhh-------ccCCH-HHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCchhc---CCcCCEEE
Confidence 9999987543211 11112 22222222211 11235579999998888754432 13588898
Q ss_pred eecC
Q psy7538 328 LTSN 331 (543)
Q Consensus 328 i~s~ 331 (543)
+.+|
T Consensus 246 vDGG 249 (255)
T d1fmca_ 246 VSGG 249 (255)
T ss_dssp ESTT
T ss_pred ECcC
Confidence 8877
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.60 E-value=1.4e-14 Score=138.84 Aligned_cols=222 Identities=16% Similarity=0.138 Sum_probs=149.4
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
-++||+++||||++-||+++++.|++.|. +|++..|+. ++++++ .+ ...++.++.+|
T Consensus 3 rl~GK~alITGas~GIG~aia~~la~~Ga---~V~i~~r~~------~~~~~~---------~~-----~~~~~~~~~~D 59 (250)
T d1ydea1 3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGA---RVVICDKDE------SGGRAL---------EQ-----ELPGAVFILCD 59 (250)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHH---------HH-----HCTTEEEEECC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHH---------HH-----hcCCCeEEEcc
Confidence 36899999999999999999999999997 888888863 344332 11 12467889999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CccEEEEcCccCC----C----cccHHHHHHHHHHHHHHHHHHHHhc--cCCceE
Q psy7538 107 ITQLKLGISEIDKKELID-------NVDIVYHVAATIR----F----DEPIKTAVILNTRGTRDMLELSKQM--KNLKCF 169 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~~a~~~--~~l~~~ 169 (543)
+++++ +++++++ ++|++||+||... + .+.++..+++|+.|+.++.+++... ++-.++
T Consensus 60 vs~~~------~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~I 133 (250)
T d1ydea1 60 VTQED------DVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNV 133 (250)
T ss_dssp TTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred CCCHH------HHHHHHHHHHHhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCC
Confidence 99876 6666553 5899999999542 2 1446778999999999888877542 112699
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+..... ....|+.||+..+.+.+..+. +|+.
T Consensus 134 i~isS~~~~~~~~--------------------------------------~~~~Y~asKaal~~lt~~lA~e~a~~gIr 175 (250)
T d1ydea1 134 INISSLVGAIGQA--------------------------------------QAVPYVATKGAVTAMTKALALDESPYGVR 175 (250)
T ss_dssp EEECCHHHHHCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred ccccccccccccc--------------------------------------CcchhHHHHhhHHHHHHHHHHHhcccCeE
Confidence 9999986643211 115899999999988877654 6899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
+..+.|+.|-.+..+...+ ....+...+....... ...-+...+|+|++++.++.+ .. -..|++
T Consensus 176 VN~I~PG~i~T~~~~~~~~---~~~~~~~~~~~~~~~~---------pl~R~g~p~eva~~v~fL~Sd-a~---~itG~~ 239 (250)
T d1ydea1 176 VNCISPGNIWTPLWEELAA---LMPDPRASIREGMLAQ---------PLGRMGQPAEVGAAAVFLASE-AN---FCTGIE 239 (250)
T ss_dssp EEEEEECSBCCHHHHHHHT---TSSSHHHHHHHHHHTS---------TTSSCBCHHHHHHHHHHHHHH-CT---TCCSCE
T ss_pred EEEEeeCCCCChhHHHHhh---cCCCHHHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHhCc-cC---CCcCCe
Confidence 9999999874321100000 0011122222222111 112356689999998877643 21 135888
Q ss_pred EEeecC
Q psy7538 326 CNLTSN 331 (543)
Q Consensus 326 yni~s~ 331 (543)
+.+.+|
T Consensus 240 i~vDGG 245 (250)
T d1ydea1 240 LLVTGG 245 (250)
T ss_dssp EEESTT
T ss_pred EEECCC
Confidence 888776
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.60 E-value=2.4e-14 Score=137.97 Aligned_cols=227 Identities=9% Similarity=0.097 Sum_probs=152.1
Q ss_pred h-cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 27 T-YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 27 ~-~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
| ++||+++||||++-||++++++|++.|. +|.+..|+. +++++.. +.++ .....+.++.+
T Consensus 2 f~L~gK~alITGas~GIG~aia~~la~~G~---~V~i~~r~~------~~l~~~~-----~~~~-----~~~~~~~~~~~ 62 (258)
T d1ae1a_ 2 WSLKGTTALVTGGSKGIGYAIVEELAGLGA---RVYTCSRNE------KELDECL-----EIWR-----EKGLNVEGSVC 62 (258)
T ss_dssp CCCTTCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH-----HHHH-----HTTCCEEEEEC
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHH-----HHHH-----hcCCCceEEEe
Confidence 5 6899999999999999999999999997 889999864 3443321 1122 22356788999
Q ss_pred cCCCCCCCCCHHHHHHHhc--------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCc
Q psy7538 106 DITQLKLGISEIDKKELID--------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLK 167 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~--------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~ 167 (543)
|+++++ +++++++ .+|+++|+|+.... .+.++..+++|+.++..+.+++... ++-.
T Consensus 63 D~s~~~------~~~~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g 136 (258)
T d1ae1a_ 63 DLLSRT------ERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNG 136 (258)
T ss_dssp CTTCHH------HHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSE
T ss_pred ecCCHH------HHHHHHHHHHHHhCCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccccc
Confidence 999875 5544432 38999999997642 3567789999999999998877532 3567
Q ss_pred eEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cC
Q psy7538 168 CFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LG 243 (543)
Q Consensus 168 ~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~ 243 (543)
++|++||..+..... ....|+.+|+..+.+.+..+. +|
T Consensus 137 ~ii~isS~~~~~~~~--------------------------------------~~~~Y~~sK~al~~lt~~lA~el~~~g 178 (258)
T d1ae1a_ 137 NVIFLSSIAGFSALP--------------------------------------SVSLYSASKGAINQMTKSLACEWAKDN 178 (258)
T ss_dssp EEEEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred ccccccccccccccc--------------------------------------cchhHHHHHHHHHHHHHHHHHhcCcCc
Confidence 999999997743311 116899999999988877655 68
Q ss_pred CcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCC
Q psy7538 244 MPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERK 323 (543)
Q Consensus 244 lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~ 323 (543)
+.+..+.|+.|..+..+. +.............+.... ...-+...+|+|++++.++..... -..|
T Consensus 179 IrvN~I~PG~i~T~~~~~---~~~~~~~~~~~~~~~~~~~---------plgR~~~pediA~~v~fL~S~~s~---~itG 243 (258)
T d1ae1a_ 179 IRVNSVAPGVILTPLVET---AIKKNPHQKEEIDNFIVKT---------PMGRAGKPQEVSALIAFLCFPAAS---YITG 243 (258)
T ss_dssp EEEEEEEECSBC----------------CHHHHHHHHHHS---------TTCSCBCHHHHHHHHHHHHSGGGT---TCCS
T ss_pred EEEEEEeeCcccCcchhh---hhhhhhhhHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhChhhC---CCcC
Confidence 999999999886543221 1111111222333222211 112267889999999888754332 1257
Q ss_pred cEEEeecC
Q psy7538 324 SVCNLTSN 331 (543)
Q Consensus 324 ~vyni~s~ 331 (543)
+.+.+.+|
T Consensus 244 ~~i~vDGG 251 (258)
T d1ae1a_ 244 QIIWADGG 251 (258)
T ss_dssp CEEEESTT
T ss_pred cEEEeCCC
Confidence 78887765
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.60 E-value=1.2e-14 Score=140.09 Aligned_cols=222 Identities=14% Similarity=0.124 Sum_probs=148.5
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||++-||++++++|++.|. +|.+..|+. ++++++.+ ....++..+.+|+
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~Ga---~V~~~~r~~------~~l~~~~~-------------~~~~~~~~~~~Dv 60 (256)
T d1k2wa_ 3 LDGKTALITGSARGIGRAFAEAYVREGA---RVAIADINL------EAARATAA-------------EIGPAACAIALDV 60 (256)
T ss_dssp TTTEEEEEETCSSHHHHHHHHHHHHTTE---EEEEEESCH------HHHHHHHH-------------HHCTTEEEEECCT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHHH-------------HhCCceEEEEeeC
Confidence 5899999999999999999999999986 888888863 34433321 1124688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHh-c---cCCceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQ-M---KNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-~---~~l~~~ 169 (543)
++++ +++++++ .+|++||+||.... .+.++..+++|+.|+..+.+.+.. + ++-.++
T Consensus 61 t~~~------~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~I 134 (256)
T d1k2wa_ 61 TDQA------SIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKI 134 (256)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEE
T ss_pred CCHH------HHHHHHHHHHHHhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCcc
Confidence 9876 6666553 58999999997643 245677899999999999876432 2 234689
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+..... ....|+.||+..+.+.+..+. +|+.
T Consensus 135 v~isS~~~~~~~~--------------------------------------~~~~Y~asKaal~~lt~~lA~el~~~gIr 176 (256)
T d1k2wa_ 135 INMASQAGRRGEA--------------------------------------LVGVYCATKAAVISLTQSAGLNLIRHGIN 176 (256)
T ss_dssp EEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred ccccchhhccccc--------------------------------------cccchhhhhhHHHHHHHHHHHHhcccCeE
Confidence 9999986643211 015899999999988877654 6899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHh--cCcee----EEeecCCcccccchHHHHHHHHHHHhhhhcccCC
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAG--KGVIR----SMYCKNTGMADFLPADVAINGVFLFTWDFLNSKE 319 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~--~g~~~----~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~ 319 (543)
+..+.||.|-.+..+ .+..... .+... ..........-+...+|+|++++.++.....
T Consensus 177 VN~V~PG~i~T~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~~v~fL~S~~a~--- 240 (256)
T d1k2wa_ 177 VNAIAPGVVDGEHWD-------------GVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLATPEAD--- 240 (256)
T ss_dssp EEEEEECCBCCTTHH-------------HHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHHHHHHTTSGGGT---
T ss_pred EEEEecCCCCchhhh-------------hhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhC---
Confidence 999999876443210 1111000 00000 0000000111245578999998887654332
Q ss_pred CCCCcEEEeecC
Q psy7538 320 SERKSVCNLTSN 331 (543)
Q Consensus 320 ~~~~~vyni~s~ 331 (543)
-..|++..+.+|
T Consensus 241 ~iTG~~i~vDGG 252 (256)
T d1k2wa_ 241 YIVAQTYNVDGG 252 (256)
T ss_dssp TCCSCEEEESTT
T ss_pred CccCceEEECcc
Confidence 135888888776
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.59 E-value=2.2e-14 Score=137.73 Aligned_cols=220 Identities=14% Similarity=0.116 Sum_probs=148.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||++-||++++++|++.|. +|.+..|+. +++++..+ .+ ....++.++.+|+
T Consensus 4 L~gK~alVTGas~GIG~aia~~la~~Ga---~V~~~~r~~------~~~~~~~~-----~~------~~~~~~~~~~~Dv 63 (251)
T d1zk4a1 4 LDGKVAIITGGTLGIGLAIATKFVEEGA---KVMITGRHS------DVGEKAAK-----SV------GTPDQIQFFQHDS 63 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHHH-----HH------CCTTTEEEEECCT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHHH-----Hh------CCCCcEEEEEccC
Confidence 6899999999999999999999999997 788888864 33332211 11 1234788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHh-cc--CC-ceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQ-MK--NL-KCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-~~--~l-~~~ 169 (543)
++++ +++.+++ ++|++||+|+.... .+.++..+++|+.|+..+.+++.. +. +- .++
T Consensus 64 ~~~~------~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~I 137 (251)
T d1zk4a1 64 SDED------GWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASI 137 (251)
T ss_dssp TCHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEE
T ss_pred CCHH------HHHHHHHHHHHHhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCce
Confidence 9876 5555543 58999999987532 245677899999999999888643 21 22 478
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHh------hcC
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECM------ELG 243 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~------~~~ 243 (543)
|++||..+..... ....|+.||+..+.+.+..+ .+|
T Consensus 138 i~isS~~~~~~~~--------------------------------------~~~~Y~asKaal~~lt~~lA~e~~l~~~g 179 (251)
T d1zk4a1 138 INMSSIEGFVGDP--------------------------------------SLGAYNASKGAVRIMSKSAALDCALKDYD 179 (251)
T ss_dssp EEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EeeeccceeccCC--------------------------------------CchhHHHHHHHHhcchHHHHHHHhcCCCc
Confidence 9999986643211 01589999999888776533 258
Q ss_pred CcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCC
Q psy7538 244 MPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERK 323 (543)
Q Consensus 244 lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~ 323 (543)
+.+..+.|+.|-.+..+ ....+... ...... ....-+...+|+|++++.++..... -..|
T Consensus 180 IrVN~I~PG~i~T~~~~-------~~~~~~~~-~~~~~~---------~pl~R~~~pedvA~~v~fL~S~~s~---~itG 239 (251)
T d1zk4a1 180 VRVNTVHPGYIKTPLVD-------DLPGAEEA-MSQRTK---------TPMGHIGEPNDIAYICVYLASNESK---FATG 239 (251)
T ss_dssp EEEEEEEECCBCCHHHH-------TSTTHHHH-HTSTTT---------CTTSSCBCHHHHHHHHHHHHSGGGT---TCCS
T ss_pred EEEEEEeCCCCCChhHH-------hcCCHHHH-HHHHhC---------CCCCCCcCHHHHHHHHHHHhCchhC---CCcC
Confidence 99999999988543221 11111111 110000 0111255689999998877754332 1358
Q ss_pred cEEEeecC
Q psy7538 324 SVCNLTSN 331 (543)
Q Consensus 324 ~vyni~s~ 331 (543)
+++.+.+|
T Consensus 240 ~~i~vDGG 247 (251)
T d1zk4a1 240 SEFVVDGG 247 (251)
T ss_dssp CEEEESTT
T ss_pred cEEEECcc
Confidence 88888766
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.59 E-value=1.7e-14 Score=139.27 Aligned_cols=234 Identities=13% Similarity=0.100 Sum_probs=148.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||++-||++++++|++.|. +|.+..|+.. ++++++. +.+... ...++.++.+|+
T Consensus 2 L~gK~alITGas~GIG~aiA~~la~~Ga---~V~~~~r~~~-----~~~~~~~-----~~~~~~----~g~~~~~~~~Dv 64 (260)
T d1x1ta1 2 LKGKVAVVTGSTSGIGLGIATALAAQGA---DIVLNGFGDA-----AEIEKVR-----AGLAAQ----HGVKVLYDGADL 64 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEECCSCH-----HHHHHHH-----HHHHHH----HTSCEEEECCCT
T ss_pred CCcCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCcH-----HHHHHHH-----HHHHHh----cCCcEEEEECCC
Confidence 5899999999999999999999999996 8888888752 2222211 111111 124788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+..+.+.+... ++-.++|
T Consensus 65 ~~~~------~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv 138 (260)
T d1x1ta1 65 SKGE------AVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRII 138 (260)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEe
Confidence 9976 6666553 58999999997532 2556778999999998887776432 2446999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... ....|+.||+..+.+.+..+. +|+.+
T Consensus 139 ~isS~~~~~~~~--------------------------------------~~~~Y~asKaal~~lt~~lA~el~~~gIrV 180 (260)
T d1x1ta1 139 NIASAHGLVASA--------------------------------------NKSAYVAAKHGVVGFTKVTALETAGQGITA 180 (260)
T ss_dssp EECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEE
T ss_pred ecccccceeccC--------------------------------------CcchhhhhhhhHHHhHHHHHHHhchhCcEE
Confidence 999987643211 015899999999988877654 68999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
..+.|+.|-.+..+... .......+.-.. ..............-+...+|+|++++.++..... -..|++.
T Consensus 181 N~I~PG~i~T~~~~~~~---~~~~~~~~~~~~---~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~~a~---~itG~~i 251 (260)
T d1x1ta1 181 NAICPGWVRTPLVEKQI---SALAEKNGVDQE---TAARELLSEKQPSLQFVTPEQLGGTAVFLASDAAA---QITGTTV 251 (260)
T ss_dssp EEEEECCBCC------------------------------CHHHHCTTCCCBCHHHHHHHHHHHHSGGGT---TCCSCEE
T ss_pred EEEecCCCCChhhhhhh---hhhhhhcCCChH---HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhC---CCcCCEE
Confidence 99999987544221100 000000000000 00000000001112245689999998877754332 1358888
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
.+.+|
T Consensus 252 ~vDGG 256 (260)
T d1x1ta1 252 SVDGG 256 (260)
T ss_dssp EESTT
T ss_pred EECcc
Confidence 88766
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.59 E-value=3.9e-14 Score=135.94 Aligned_cols=220 Identities=14% Similarity=0.155 Sum_probs=151.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||++-||++++++|++.|. +|.+..|+. +++++.. +.+ .....++..+.+|+
T Consensus 8 lenKvalITGas~GIG~a~a~~la~~Ga---~V~~~~r~~------~~l~~~~-----~~l-----~~~g~~~~~~~~Dv 68 (251)
T d2c07a1 8 GENKVALVTGAGRGIGREIAKMLAKSVS---HVICISRTQ------KSCDSVV-----DEI-----KSFGYESSGYAGDV 68 (251)
T ss_dssp CSSCEEEEESTTSHHHHHHHHHHTTTSS---EEEEEESSH------HHHHHHH-----HHH-----HTTTCCEEEEECCT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCC---EEEEEECCH------HHHHHHH-----HHH-----HhcCCcEEEEEccC
Confidence 4689999999999999999999999986 788888864 3333221 112 22335788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ +++.+++ .+|++||+|+.... .+.++..+++|+.|+..+.+++... ++-.++|
T Consensus 69 t~~~------~v~~~~~~~~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IV 142 (251)
T d2c07a1 69 SKKE------EISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRII 142 (251)
T ss_dssp TCHH------HHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEE
Confidence 9875 6666554 68999999987542 2567778999999998888876432 2457999
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... ....|+.||+..+.+.+..+. +|+.+
T Consensus 143 nisS~~~~~~~~--------------------------------------~~~~Y~asKaal~~ltr~lA~el~~~gIrV 184 (251)
T d2c07a1 143 NISSIVGLTGNV--------------------------------------GQANYSSSKAGVIGFTKSLAKELASRNITV 184 (251)
T ss_dssp EECCTHHHHCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred EECCHHhcCCCC--------------------------------------CCHHHHHHHHHHHHHHHHHHHHhhhhCeEE
Confidence 999986643211 015899999999998877654 68999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
..+.|+.|-.+..+ .. +......+....+ ..-+...+|+|++++.++..... -..|++.
T Consensus 185 N~V~PG~v~T~~~~-------~~--~~~~~~~~~~~~p---------l~R~~~pedvA~~v~fL~S~~s~---~itG~~i 243 (251)
T d2c07a1 185 NAIAPGFISSDMTD-------KI--SEQIKKNIISNIP---------AGRMGTPEEVANLACFLSSDKSG---YINGRVF 243 (251)
T ss_dssp EEEEECSBCC------------C--CHHHHHHHHTTCT---------TSSCBCHHHHHHHHHHHHSGGGT---TCCSCEE
T ss_pred EEEccCCEeccccc-------cc--CHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCchhC---CCcCcEE
Confidence 99999988544322 11 1223333322211 11255689999998877754432 1357888
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
.+.+|
T Consensus 244 ~vDGG 248 (251)
T d2c07a1 244 VIDGG 248 (251)
T ss_dssp EESTT
T ss_pred EECCC
Confidence 88765
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.58 E-value=2.3e-14 Score=138.25 Aligned_cols=207 Identities=18% Similarity=0.222 Sum_probs=143.7
Q ss_pred hhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCC-HHHHHHHHhcCchhHHHHhhcCcCCCCceEEEE
Q psy7538 26 KTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKT-PNQRVEELFESPVFDALKTLRGKSILQKIQVIS 104 (543)
Q Consensus 26 ~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~-~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~ 104 (543)
+|=.+.+|+||||+|-||++++++|+++|. +.|.++.|+....+ .++.++++ .....++.++.
T Consensus 5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga--~~vvl~~R~~~~~~~~~~~~~~l--------------~~~g~~v~~~~ 68 (259)
T d2fr1a1 5 EWKPTGTVLVTGGTGGVGGQIARWLARRGA--PHLLLVSRSGPDADGAGELVAEL--------------EALGARTTVAA 68 (259)
T ss_dssp CCCCCSEEEEETTTSHHHHHHHHHHHHHTC--SEEEEEESSGGGSTTHHHHHHHH--------------HHTTCEEEEEE
T ss_pred ccCCcCEEEEECCCcHHHHHHHHHHHHCCC--CEEEEEeCCccCHHHHHHHHHHH--------------Hhccccccccc
Confidence 455678999999999999999999999986 36888888743332 22222222 12235799999
Q ss_pred ccCCCCCCCCCHHHHHHHhc------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhccCCceEEE
Q psy7538 105 GDITQLKLGISEIDKKELID------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTY 171 (543)
Q Consensus 105 gDl~~~~lgls~~~~~~l~~------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~ 171 (543)
+|+++++ +++.+++ .+|.|+|+|+.... .+.+...+++|+.|+.++.++++.. +..++|+
T Consensus 69 ~Dv~d~~------~~~~~~~~i~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~-~~~~iv~ 141 (259)
T d2fr1a1 69 CDVTDRE------SVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL-DLTAFVL 141 (259)
T ss_dssp CCTTCHH------HHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-CCSEEEE
T ss_pred cccchHH------HHHHhhccccccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhcc-CCceEee
Confidence 9999876 6666654 37999999997643 1335567899999999999988776 6789999
Q ss_pred EecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhhcCCcEEEEec
Q psy7538 172 ISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECMELGMPCMILRP 251 (543)
Q Consensus 172 vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~~~lp~~IlRp 251 (543)
+||..+...... ...|+.+|+..|.+..+....|+++..+.|
T Consensus 142 ~SS~a~~~g~~~--------------------------------------~~~YaAaka~l~~la~~~~~~Gi~v~~I~p 183 (259)
T d2fr1a1 142 FSSFASAFGAPG--------------------------------------LGGYAPGNAYLDGLAQQRRSDGLPATAVAW 183 (259)
T ss_dssp EEEHHHHTCCTT--------------------------------------CTTTHHHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred ecchhhccCCcc--------------------------------------cHHHHHHHHhHHHHHHHHHhCCCCEEECCC
Confidence 999865432110 157999999999988776667999999999
Q ss_pred CeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhc
Q psy7538 252 SIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFL 315 (543)
Q Consensus 252 s~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~ 315 (543)
+.+.+++. .+. ...... .......++.+++++++..++....
T Consensus 184 g~~~~~g~------~~~----------~~~~~~------~~~G~~~~~~~~~~~~l~~~l~~~~ 225 (259)
T d2fr1a1 184 GTWAGSGM------AEG----------PVADRF------RRHGVIEMPPETACRALQNALDRAE 225 (259)
T ss_dssp CCBC----------------------------C------TTTTEECBCHHHHHHHHHHHHHTTC
T ss_pred CcccCCcc------ccc----------hHHHHH------HhcCCCCCCHHHHHHHHHHHHhCCC
Confidence 97755421 110 000000 0111345678999999888876544
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.58 E-value=2.1e-14 Score=138.47 Aligned_cols=221 Identities=13% Similarity=0.147 Sum_probs=138.6
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||++-||+.++++|++.|. +|.+..|+. +++++.. +.+. ....++..+.+|+
T Consensus 6 LkgK~alVTGas~GIG~aiA~~la~~Ga---~V~~~~r~~------~~l~~~~-----~~~~-----~~~~~~~~~~~Dv 66 (259)
T d1xq1a_ 6 LKAKTVLVTGGTKGIGHAIVEEFAGFGA---VIHTCARNE------YELNECL-----SKWQ-----KKGFQVTGSVCDA 66 (259)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH-----HHHH-----HTTCCEEEEECCT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHH-----HHHH-----hcCCceEEEeccC
Confidence 4899999999999999999999999997 888898864 3343321 1122 1234789999999
Q ss_pred CCCCCCCCHHHHHHHh--------cCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceE
Q psy7538 108 TQLKLGISEIDKKELI--------DNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~--------~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~ 169 (543)
++++ +++.++ ..+|+++|+||.... .+.++..+++|+.|+..+.+.+... ++-.++
T Consensus 67 ~~~~------~v~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~I 140 (259)
T d1xq1a_ 67 SLRP------EREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNI 140 (259)
T ss_dssp TSHH------HHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEE
T ss_pred CCHH------HHHHHHHHHHHHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccc
Confidence 9875 444433 248999999997542 2557778999999999988877542 245699
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+..... ....|+.||+..+.+.+..+. +|+.
T Consensus 141 v~isS~~~~~~~~--------------------------------------~~~~Y~asKaal~~lt~~lA~e~~~~gIr 182 (259)
T d1xq1a_ 141 IFMSSIAGVVSAS--------------------------------------VGSIYSATKGALNQLARNLACEWASDGIR 182 (259)
T ss_dssp EEEC------------------------------------------------CCHHHHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred ccccccccccccc--------------------------------------ccccccccccchhhhhHHHHHHhcccCeE
Confidence 9999986643211 016899999999988876654 6899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
+..+-|+.|-.+..+. ... .......... ....-+...+|+|++++.++..... -..|++
T Consensus 183 VN~V~PG~i~T~~~~~-------~~~-~~~~~~~~~~---------~pl~R~~~pedvA~~v~fL~S~~s~---~iTG~~ 242 (259)
T d1xq1a_ 183 ANAVAPAVIATPLAEA-------VYD-DEFKKVVISR---------KPLGRFGEPEEVSSLVAFLCMPAAS---YITGQT 242 (259)
T ss_dssp EEEEECCSCC------------------------------------------CCGGGGHHHHHHHTSGGGT---TCCSCE
T ss_pred EEEeccCcccCHHhhh-------hch-HHHHHHHHhC---------CCCCCCcCHHHHHHHHHHHhCchhc---CCcCcE
Confidence 9999999774432211 000 0000000000 0111234568999998887754332 135778
Q ss_pred EEeecC
Q psy7538 326 CNLTSN 331 (543)
Q Consensus 326 yni~s~ 331 (543)
..+.+|
T Consensus 243 i~vDGG 248 (259)
T d1xq1a_ 243 ICVDGG 248 (259)
T ss_dssp EECCCC
T ss_pred EEeCCC
Confidence 887766
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.58 E-value=1.9e-13 Score=132.43 Aligned_cols=226 Identities=15% Similarity=0.198 Sum_probs=152.0
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
-++||+++||||++-||+.++++|++.|. +|++..|+. +++++..+ .+ ....++.++.+|
T Consensus 3 rL~gKvalITGas~GIG~aia~~la~~Ga---~V~i~~r~~------~~~~~~~~-----~l------~~~~~~~~~~~D 62 (268)
T d2bgka1 3 RLQDKVAIITGGAGGIGETTAKLFVRYGA---KVVIADIAD------DHGQKVCN-----NI------GSPDVISFVHCD 62 (268)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHHH-----HH------CCTTTEEEEECC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHHH-----Hh------cCCCceEEEEcc
Confidence 47899999999999999999999999996 888888863 34433211 11 112467889999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC---------cccHHHHHHHHHHHHHHHHHHHHh-c--cCCc
Q psy7538 107 ITQLKLGISEIDKKELID-------NVDIVYHVAATIRF---------DEPIKTAVILNTRGTRDMLELSKQ-M--KNLK 167 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~---------~~~~~~~~~~Nv~gt~~ll~~a~~-~--~~l~ 167 (543)
+++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+..+.+.+.. + .+-.
T Consensus 63 v~~~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g 136 (268)
T d2bgka1 63 VTKDE------DVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKG 136 (268)
T ss_dssp TTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCE
T ss_pred CCCHH------HHHHHHHHHHHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCC
Confidence 99875 6666553 68999999986421 134677899999999999887754 2 2446
Q ss_pred eEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cC
Q psy7538 168 CFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LG 243 (543)
Q Consensus 168 ~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~ 243 (543)
++|++||..+...... ....|+.||+..+.+.+..+. +|
T Consensus 137 ~ii~iss~~~~~~~~~-------------------------------------~~~~Y~asKaal~~lt~~lA~el~~~g 179 (268)
T d2bgka1 137 SIVFTASISSFTAGEG-------------------------------------VSHVYTATKHAVLGLTTSLCTELGEYG 179 (268)
T ss_dssp EEEEECCGGGTCCCTT-------------------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred Cccccccccccccccc-------------------------------------cccccchhHHHHHhCHHHHHHHhChhC
Confidence 8999998865432110 014799999999988877654 68
Q ss_pred CcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCC
Q psy7538 244 MPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERK 323 (543)
Q Consensus 244 lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~ 323 (543)
+.+..+.|+.|-.+......+ .............. ....-+...+|+|++++.++..... -..|
T Consensus 180 IrVN~I~PG~i~T~~~~~~~~------~~~~~~~~~~~~~~-------~~~gr~~~pedvA~~v~fL~S~~s~---~itG 243 (268)
T d2bgka1 180 IRVNCVSPYIVASPLLTDVFG------VDSSRVEELAHQAA-------NLKGTLLRAEDVADAVAYLAGDESK---YVSG 243 (268)
T ss_dssp EEEEEEEESCCSCCCCTTSSS------CCHHHHHHHHHHTC-------SSCSCCCCHHHHHHHHHHHHSGGGT---TCCS
T ss_pred eEEEecCCCCccChHHhhhhc------CCHHHHHHHHHhcc-------ccCCCCcCHHHHHHHHHHHhChhhC---CccC
Confidence 999999999886554322111 11111111111000 0111245689999999887754332 1368
Q ss_pred cEEEeecC
Q psy7538 324 SVCNLTSN 331 (543)
Q Consensus 324 ~vyni~s~ 331 (543)
++..+.+|
T Consensus 244 q~i~VDGG 251 (268)
T d2bgka1 244 LNLVIDGG 251 (268)
T ss_dssp CEEEESTT
T ss_pred ceEEECcC
Confidence 89998876
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.57 E-value=4.3e-14 Score=135.61 Aligned_cols=223 Identities=13% Similarity=0.093 Sum_probs=149.4
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||++-||+.++++|++.|. +|.+..|+. +++++.. +.+.++ ...++.++.+|+
T Consensus 3 l~gK~~lITGas~GIG~aia~~la~~Ga---~V~i~~r~~------~~~~~~~-----~~l~~~----~g~~~~~~~~Dv 64 (251)
T d1vl8a_ 3 LRGRVALVTGGSRGLGFGIAQGLAEAGC---SVVVASRNL------EEASEAA-----QKLTEK----YGVETMAFRCDV 64 (251)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH-----HHHHHH----HCCCEEEEECCT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHH-----HHHHHH----hCCcEEEEEccC
Confidence 5899999999999999999999999997 888888864 2332221 112211 124688899999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHh-c--cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQ-M--KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--~~l~~~V 170 (543)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+..+.+.+.. + .+-.++|
T Consensus 65 ~~~~------~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii 138 (251)
T d1vl8a_ 65 SNYE------EVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSII 138 (251)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccccccccc
Confidence 9875 5665543 68999999996532 245677899999999999888654 3 2345999
Q ss_pred EEecCcc-ccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 171 YISTAYC-HPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 171 ~vST~y~-~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
++||..+ ..... ....|+.||+..+.+.+..+. +|+.
T Consensus 139 ~i~S~~~~~~~~~--------------------------------------~~~~Y~asKaal~~lt~~lA~e~~~~gIr 180 (251)
T d1vl8a_ 139 NIGSLTVEEVTMP--------------------------------------NISAYAASKGGVASLTKALAKEWGRYGIR 180 (251)
T ss_dssp EECCGGGTCCCSS--------------------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred ccccchhccccCc--------------------------------------cccchHHHHHhHHHHHHHHHHHhcccCeE
Confidence 9998643 21111 015899999999988877654 6899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
+..+.|+.|-.+..+. ............+..+ ..-+...+|+|++++.++..... -..|++
T Consensus 181 VN~I~PG~i~T~~~~~-------~~~~~~~~~~~~~~~p---------l~R~~~pedvA~~v~fL~S~~a~---~itG~~ 241 (251)
T d1vl8a_ 181 VNVIAPGWYRTKMTEA-------VFSDPEKLDYMLKRIP---------LGRTGVPEDLKGVAVFLASEEAK---YVTGQI 241 (251)
T ss_dssp EEEEEECCBCSTTTHH-------HHTCHHHHHHHHHTCT---------TSSCBCGGGGHHHHHHHHSGGGT---TCCSCE
T ss_pred EEEEeeCcccCHHHHh-------ccCCHHHHHHHHhcCC---------CCCCCCHHHHHHHHHHHhCchhC---CCcCcE
Confidence 9999999885432211 0111112222222211 11234568999998877754332 135888
Q ss_pred EEeecC
Q psy7538 326 CNLTSN 331 (543)
Q Consensus 326 yni~s~ 331 (543)
..+.+|
T Consensus 242 i~vDGG 247 (251)
T d1vl8a_ 242 IFVDGG 247 (251)
T ss_dssp EEESTT
T ss_pred EEeCcC
Confidence 888766
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.57 E-value=3.8e-14 Score=136.53 Aligned_cols=230 Identities=13% Similarity=0.090 Sum_probs=151.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||++-||+.++++|++.|. +|++..|+. +++++.. +.+.. .....++..+.+|+
T Consensus 2 l~gK~alITGas~GIG~aia~~la~~Ga---~V~i~~r~~------~~l~~~~-----~~~~~---~~~~~~~~~~~~Dv 64 (258)
T d1iy8a_ 2 FTDRVVLITGGGSGLGRATAVRLAAEGA---KLSLVDVSS------EGLEASK-----AAVLE---TAPDAEVLTTVADV 64 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH-----HHHHH---HCTTCCEEEEECCT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHH-----HHHHh---hCCCCeEEEEeccC
Confidence 6899999999999999999999999996 889999864 2332211 11111 11234788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCC----C----cccHHHHHHHHHHHHHHHHHHHHhc---cCCceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIR----F----DEPIKTAVILNTRGTRDMLELSKQM---KNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~ 169 (543)
++++ +++.+++ .+|++||+||... + .+.++..+++|+.|+..+.+++... ++-.++
T Consensus 65 t~~~------~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~I 138 (258)
T d1iy8a_ 65 SDEA------QVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMV 138 (258)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEE
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCC
Confidence 9876 6665543 5899999998542 2 2456778999999999998877432 245689
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+..... ....|+.||+..+.+.+..+. +|+.
T Consensus 139 i~isS~~~~~~~~--------------------------------------~~~~Y~asKaal~~lt~~lA~el~~~gIr 180 (258)
T d1iy8a_ 139 VNTASVGGIRGIG--------------------------------------NQSGYAAAKHGVVGLTRNSAVEYGRYGIR 180 (258)
T ss_dssp EEECCGGGTSBCS--------------------------------------SBHHHHHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred cccccHhhccCCC--------------------------------------CchHHHHHHHHHHHHHHHHHHHhCccCce
Confidence 9999986643211 016899999999888876654 6899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
+..+.|+.|..+..+......+. ..+........... ...-+...+|+|++++.++..... -..|++
T Consensus 181 VN~i~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~---------pl~R~~~p~dvA~~v~fL~S~~s~---~itG~~ 247 (258)
T d1iy8a_ 181 INAIAPGAIWTPMVENSMKQLDP-ENPRKAAEEFIQVN---------PSKRYGEAPEIAAVVAFLLSDDAS---YVNATV 247 (258)
T ss_dssp EEEEEECSBCSHHHHHHHHHHCT-TCHHHHHHHHHTTC---------TTCSCBCHHHHHHHHHHHTSGGGT---TCCSCE
T ss_pred EEEEeeCcccCHHHHHHHhhcCc-ccHHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCchhc---CCcCce
Confidence 99999998744311000000000 00111222222111 111245679999999888765432 135888
Q ss_pred EEeecC
Q psy7538 326 CNLTSN 331 (543)
Q Consensus 326 yni~s~ 331 (543)
..+.+|
T Consensus 248 i~VDGG 253 (258)
T d1iy8a_ 248 VPIDGG 253 (258)
T ss_dssp EEESTT
T ss_pred EEcCcc
Confidence 888776
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.56 E-value=2.3e-14 Score=138.38 Aligned_cols=166 Identities=14% Similarity=0.192 Sum_probs=124.0
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||++-||+++++.|++.|. +|++..|++ +++++.. +.+ .....++..+.+|+
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~Ga---~V~~~~r~~------~~l~~~~-----~~~-----~~~g~~~~~~~~Dv 63 (260)
T d1zema1 3 FNGKVCLVTGAGGNIGLATALRLAEEGT---AIALLDMNR------EALEKAE-----ASV-----REKGVEARSYVCDV 63 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH-----HHH-----HTTTSCEEEEECCT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHH-----HHH-----HhcCCcEEEEEccC
Confidence 6899999999999999999999999997 888998864 3333221 111 22235788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCC----C----cccHHHHHHHHHHHHHHHHHHHHh-c--cCCceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIR----F----DEPIKTAVILNTRGTRDMLELSKQ-M--KNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~~a~~-~--~~l~~~ 169 (543)
++++ +++.+++ .+|++||+||... + .+.++..+++|+.|+..+.+.+.. + ++-.++
T Consensus 64 ~~~~------~v~~~~~~~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~I 137 (260)
T d1zema1 64 TSEE------AVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRI 137 (260)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred CCHH------HHHHHHHHHHHHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCC
Confidence 9875 5555543 5899999999653 2 244667899999999998887743 2 245699
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+...... ...|+.||+..+.+.+..+. +|+.
T Consensus 138 I~isS~~~~~~~~~--------------------------------------~~~Y~asKaal~~ltk~lA~el~~~gIr 179 (260)
T d1zema1 138 VNTASMAGVKGPPN--------------------------------------MAAYGTSKGAIIALTETAALDLAPYNIR 179 (260)
T ss_dssp EEECCHHHHSCCTT--------------------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred CeeechhhccCCcc--------------------------------------hHHHHHHHHHHHHHHHHHHHHhhhhCCE
Confidence 99999866432110 05899999999988877654 6899
Q ss_pred EEEEecCeeee
Q psy7538 246 CMILRPSIVVP 256 (543)
Q Consensus 246 ~~IlRps~V~G 256 (543)
+..+.|+.|-.
T Consensus 180 VN~I~PG~v~T 190 (260)
T d1zema1 180 VNAISPGYMGP 190 (260)
T ss_dssp EEEEEECSBCS
T ss_pred EEEeccCcccC
Confidence 99999998744
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.56 E-value=4.8e-14 Score=135.92 Aligned_cols=225 Identities=13% Similarity=0.137 Sum_probs=150.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||++-||++++++|++.|. +|++..|++ +++++.. +.++ ....++.++.+|+
T Consensus 6 L~GK~alITGas~GIG~aia~~la~~Ga---~V~~~~r~~------~~l~~~~-----~~~~-----~~g~~~~~~~~Dv 66 (259)
T d2ae2a_ 6 LEGCTALVTGGSRGIGYGIVEELASLGA---SVYTCSRNQ------KELNDCL-----TQWR-----SKGFKVEASVCDL 66 (259)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH-----HHHH-----HTTCEEEEEECCT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHH-----HHHH-----hcCCCceEEEeeC
Confidence 5799999999999999999999999997 788888863 3443321 1121 2235788899999
Q ss_pred CCCCCCCCHHHHHHHh-------c-CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceE
Q psy7538 108 TQLKLGISEIDKKELI-------D-NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~-------~-~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~ 169 (543)
++++ +++.++ . .+|++||+||.... .+.++..+++|+.|+..+.+++... .+-.++
T Consensus 67 ~~~~------~v~~~~~~~~~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~I 140 (259)
T d2ae2a_ 67 SSRS------ERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNV 140 (259)
T ss_dssp TCHH------HHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEE
T ss_pred CCHH------HHHHHHHHHHHHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccc
Confidence 9875 454443 2 48999999997542 2456778999999999888877542 244689
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|++||..+..... ....|+.||+..+.+.+..+. +++.
T Consensus 141 i~isS~~~~~~~~--------------------------------------~~~~Y~asKaal~~lt~~lA~el~~~gIr 182 (259)
T d2ae2a_ 141 VFISSVSGALAVP--------------------------------------YEAVYGATKGAMDQLTRCLAFEWAKDNIR 182 (259)
T ss_dssp EEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEE
T ss_pred ccccccccccccc--------------------------------------cccchHHHHHHHHHHHHHHHHHhCcCceE
Confidence 9999986643211 116899999999988877654 6899
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcE
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSV 325 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~v 325 (543)
+..+.|+.|-.+..+... ........+..+....+ ..-+...+|+|++++.++..... -..|++
T Consensus 183 VN~I~PG~i~T~~~~~~~----~~~~~~~~~~~~~~~~p---------l~R~g~pedvA~~v~fL~S~~s~---~itG~~ 246 (259)
T d2ae2a_ 183 VNGVGPGVIATSLVEMTI----QDPEQKENLNKLIDRCA---------LRRMGEPKELAAMVAFLCFPAAS---YVTGQI 246 (259)
T ss_dssp EEEEEECSBCSHHHHHHT----TSHHHHHHHHHHHHTST---------TCSCBCHHHHHHHHHHHHSGGGT---TCCSCE
T ss_pred EEEeeeCcccCHHHHhhh----hchhhHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCchhC---CCcCcE
Confidence 999999977443211000 00000112222222111 11245678999998877754332 135788
Q ss_pred EEeecC
Q psy7538 326 CNLTSN 331 (543)
Q Consensus 326 yni~s~ 331 (543)
..+.+|
T Consensus 247 i~VDGG 252 (259)
T d2ae2a_ 247 IYVDGG 252 (259)
T ss_dssp EEESTT
T ss_pred EEECCC
Confidence 888766
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.56 E-value=1.8e-14 Score=138.67 Aligned_cols=233 Identities=15% Similarity=0.126 Sum_probs=150.3
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
+||+++||||++-||++++++|++.|. +|.+..|+. +++++.. ..+.+ .....++.++.+|++
T Consensus 2 ~GKvalITGas~GIG~aia~~la~~Ga---~V~i~~r~~------~~~~~~~-----~~l~~---~~~~~~~~~~~~Dv~ 64 (254)
T d2gdza1 2 NGKVALVTGAAQGIGRAFAEALLLKGA---KVALVDWNL------EAGVQCK-----AALHE---QFEPQKTLFIQCDVA 64 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH-----HHHTT---TSCGGGEEEEECCTT
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHH-----HHHHH---hcCCCcEEEEEeecC
Confidence 689999999999999999999999996 889999874 2232211 11111 112347889999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhc-c-----CCceEEEEecC
Q psy7538 109 QLKLGISEIDKKELID-------NVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQM-K-----NLKCFTYISTA 175 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~-----~l~~~V~vST~ 175 (543)
+++ +++.+++ ++|++||+|+... .++++..+++|+.++.++..++... . .-.++|++||.
T Consensus 65 ~~~------~v~~~~~~~~~~~G~iDilVnnAg~~~-~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~ 137 (254)
T d2gdza1 65 DQQ------QLRDTFRKVVDHFGRLDILVNNAGVNN-EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSL 137 (254)
T ss_dssp SHH------HHHHHHHHHHHHHSCCCEEEECCCCCC-SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCG
T ss_pred CHH------HHHHHHHHHHHHcCCcCeecccccccc-cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccH
Confidence 875 5665543 6899999999765 4668889999999988887776442 1 12469999998
Q ss_pred ccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHH------HhhcCCcEEEE
Q psy7538 176 YCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAE------CMELGMPCMIL 249 (543)
Q Consensus 176 y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~------~~~~~lp~~Il 249 (543)
.+..... . ...|+.||+..+.+.+. +..+|+.+..+
T Consensus 138 ~~~~~~~----------~----------------------------~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I 179 (254)
T d2gdza1 138 AGLMPVA----------Q----------------------------QPVYCASKHGIVGFTRSAALAANLMNSGVRLNAI 179 (254)
T ss_dssp GGTSCCT----------T----------------------------CHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred hhccCCC----------C----------------------------ccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEE
Confidence 6643211 0 15899999988888653 22268999999
Q ss_pred ecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEee
Q psy7538 250 RPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLT 329 (543)
Q Consensus 250 Rps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~ 329 (543)
.|+.|-.+.-+..+.- ++..........+.... ...-+...+|+|++++.++.+... .|++..+.
T Consensus 180 ~PG~i~T~~~~~~~~~-~~~~~~~~~~~~~~~~~---------p~~r~~~pedvA~~v~fL~s~~~i-----tG~~i~Vd 244 (254)
T d2gdza1 180 CPGFVNTAILESIEKE-ENMGQYIEYKDHIKDMI---------KYYGILDPPLIANGLITLIEDDAL-----NGAIMKIT 244 (254)
T ss_dssp EESCBSSHHHHGGGCH-HHHGGGGGGHHHHHHHH---------HHHCCBCHHHHHHHHHHHHHCTTC-----SSCEEEEE
T ss_pred EcCCCCChhhhhcccc-ccccccHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHHcCCCC-----CCCEEEEC
Confidence 9997743211100000 00000000000000000 001134568999999988865443 68899998
Q ss_pred cCCCCcccHHH
Q psy7538 330 SNKDYKITWQE 340 (543)
Q Consensus 330 s~~~~~~t~~e 340 (543)
++ ..+.|+|
T Consensus 245 GG--~~~~~~~ 253 (254)
T d2gdza1 245 TS--KGIHFQD 253 (254)
T ss_dssp TT--TEEEECC
T ss_pred CC--Ceeeccc
Confidence 88 6666654
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.55 E-value=1.1e-13 Score=132.77 Aligned_cols=223 Identities=10% Similarity=0.034 Sum_probs=146.8
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
-++||+++||||++-||++++++|++.|. +|++..|+. ++++++.+ ....+..++.+|
T Consensus 3 rL~gK~alITGas~GIG~aia~~la~~Ga---~V~~~~~~~------~~~~~~~~-------------~~~~~~~~~~~D 60 (253)
T d1hxha_ 3 RLQGKVALVTGGASGVGLEVVKLLLGEGA---KVAFSDINE------AAGQQLAA-------------ELGERSMFVRHD 60 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEECSCH------HHHHHHHH-------------HHCTTEEEECCC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHHH-------------HhCCCeEEEEee
Confidence 37899999999999999999999999997 788888853 33333211 112467789999
Q ss_pred CCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHh-cc-CCceEE
Q psy7538 107 ITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQ-MK-NLKCFT 170 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-~~-~l~~~V 170 (543)
+++++ +++.+++ .+|++||+||.... .+.++..+++|+.|+..+.+.+.. ++ +-.++|
T Consensus 61 v~~~~------~~~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv 134 (253)
T d1hxha_ 61 VSSEA------DWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSII 134 (253)
T ss_dssp TTCHH------HHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEE
T ss_pred cCCHH------HHHHHHHHHHHHhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCcee
Confidence 99875 5555543 58999999997532 245678899999999988887754 21 237899
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh------cCC
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME------LGM 244 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~------~~l 244 (543)
++||..+...... ...|+.||+..+.+.+..+. +++
T Consensus 135 ~isS~~~~~~~~~--------------------------------------~~~Y~asKaal~~lt~~lA~e~~~~g~~I 176 (253)
T d1hxha_ 135 NMASVSSWLPIEQ--------------------------------------YAGYSASKAAVSALTRAAALSCRKQGYAI 176 (253)
T ss_dssp EECCGGGTSCCTT--------------------------------------BHHHHHHHHHHHHHHHHHHHHHHHHTCCE
T ss_pred cccchhhhcCccc--------------------------------------cccccchhHHHHHHHHHHHHHHhhcCCCE
Confidence 9999876432110 15899999998888775543 248
Q ss_pred cEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCc
Q psy7538 245 PCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKS 324 (543)
Q Consensus 245 p~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~ 324 (543)
.+..+-|+.|-.+..+. ..+.-.. ........ .....--+...+|+|++++.++..... -..|+
T Consensus 177 rVN~I~PG~i~T~~~~~---~~~~~~~-----~~~~~~~~-----~~~~~gr~~~pedvA~~v~fL~S~~s~---~itG~ 240 (253)
T d1hxha_ 177 RVNSIHPDGIYTPMMQA---SLPKGVS-----KEMVLHDP-----KLNRAGRAYMPERIAQLVLFLASDESS---VMSGS 240 (253)
T ss_dssp EEEEEEESEECCHHHHH---HSCTTCC-----HHHHBCBT-----TTBTTCCEECHHHHHHHHHHHHSGGGT---TCCSC
T ss_pred EEEEEeECCCcCHhHHh---hCcchhh-----HHHHHhCc-----cccccCCCCCHHHHHHHHHHHhChhhC---CCcCc
Confidence 88999999875431100 0000000 00000000 001112355679999999887754332 13588
Q ss_pred EEEeecC
Q psy7538 325 VCNLTSN 331 (543)
Q Consensus 325 vyni~s~ 331 (543)
+.++.++
T Consensus 241 ~i~VDGG 247 (253)
T d1hxha_ 241 ELHADNS 247 (253)
T ss_dssp EEEESSS
T ss_pred EEEECcc
Confidence 8888765
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.54 E-value=1.3e-13 Score=135.47 Aligned_cols=230 Identities=11% Similarity=0.112 Sum_probs=151.7
Q ss_pred hhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 26 KTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 26 ~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
..++||+++||||++-||+++++.|++.|. +|++..|+. +++++. .+.|..+.......++..+.+
T Consensus 8 g~L~gKvalITGas~GIG~aia~~la~~Ga---~Vvi~~r~~------~~l~~~-----~~el~~~~~~~~~~~~~~~~~ 73 (297)
T d1yxma1 8 GLLQGQVAIVTGGATGIGKAIVKELLELGS---NVVIASRKL------ERLKSA-----ADELQANLPPTKQARVIPIQC 73 (297)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHH-----HHHHHHTSCTTCCCCEEEEEC
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHH-----HHHHHhhhccccCceEEEEec
Confidence 357999999999999999999999999997 889999864 333322 222332220223457899999
Q ss_pred cCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCce
Q psy7538 106 DITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKC 168 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~ 168 (543)
|+++++ +++.+++ ++|++||+|+.... .+.++..+++|+.|+..+.+++... ++-.+
T Consensus 74 Dvs~~~------~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ 147 (297)
T d1yxma1 74 NIRNEE------EVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGS 147 (297)
T ss_dssp CTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEE
T ss_pred cCCCHH------HHHHHHHHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccc
Confidence 999876 5665543 68999999986532 2557778999999999998877532 13457
Q ss_pred EEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCC
Q psy7538 169 FTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGM 244 (543)
Q Consensus 169 ~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~l 244 (543)
+|.+|++...... ....|+.+|+..+.+.+..+. +|+
T Consensus 148 Ii~~ss~~~~~~~---------------------------------------~~~~Y~asKaal~~ltk~lA~el~~~gI 188 (297)
T d1yxma1 148 IVNIIVPTKAGFP---------------------------------------LAVHSGAARAGVYNLTKSLALEWACSGI 188 (297)
T ss_dssp EEEECCCCTTCCT---------------------------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTE
T ss_pred ccccccccccccc---------------------------------------ccccchhHHHHHHHHHHHHHHHhcccCc
Confidence 7877765332110 116899999999988877654 689
Q ss_pred cEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCc
Q psy7538 245 PCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKS 324 (543)
Q Consensus 245 p~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~ 324 (543)
.+..+.|+.|..+... +.. +... ....+.....+ ...-+...+|+|++++.++..... -..|+
T Consensus 189 rVN~I~PG~i~T~~~~------~~~-~~~~--~~~~~~~~~~~-----plgR~g~pedvA~~v~fL~Sd~s~---~iTG~ 251 (297)
T d1yxma1 189 RINCVAPGVIYSQTAV------ENY-GSWG--QSFFEGSFQKI-----PAKRIGVPEEVSSVVCFLLSPAAS---FITGQ 251 (297)
T ss_dssp EEEEEEECSBCCTGGG------TTS-GGGG--GGGGTTGGGGS-----TTSSCBCTHHHHHHHHHHHSGGGT---TCCSC
T ss_pred eEEEeeeCcCcCcchh------hhc-cccC--HHHHHHHHhcC-----CCCCCcCHHHHHHHHHHHhCchhc---CcCCc
Confidence 9999999988554221 111 0000 00111111000 011244578999999888755432 13688
Q ss_pred EEEeecC
Q psy7538 325 VCNLTSN 331 (543)
Q Consensus 325 vyni~s~ 331 (543)
+..+.+|
T Consensus 252 ~i~VDGG 258 (297)
T d1yxma1 252 SVDVDGG 258 (297)
T ss_dssp EEEESTT
T ss_pred EEEeCcC
Confidence 9988877
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.54 E-value=2e-13 Score=129.98 Aligned_cols=216 Identities=11% Similarity=0.098 Sum_probs=148.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||++-||+.++++|++.|. +|++..|+. +++++.. .....++.++.+|+
T Consensus 3 l~gK~alItGas~GIG~aia~~l~~~G~---~V~~~~r~~------~~~~~~~-------------~~~~~~~~~~~~Dl 60 (241)
T d2a4ka1 3 LSGKTILVTGAASGIGRAALDLFAREGA---SLVAVDREE------RLLAEAV-------------AALEAEAIAVVADV 60 (241)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH-------------HTCCSSEEEEECCT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHH-------------HHcCCceEEEEecC
Confidence 6899999999999999999999999997 889998864 3333322 22345788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc-cCCceEEEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM-KNLKCFTYI 172 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~v 172 (543)
++++ +++++++ ++|++||+|+.... .+.++..+++|+.++..+.+++... .+-+.++.+
T Consensus 61 s~~~------~i~~~~~~i~~~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ 134 (241)
T d2a4ka1 61 SDPK------AVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLT 134 (241)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCHH------HHHHHHHHHHHHhCCccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeec
Confidence 9876 6655543 58999999986532 2446778999999999999887653 233455555
Q ss_pred ecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEE
Q psy7538 173 STAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMI 248 (543)
Q Consensus 173 ST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~I 248 (543)
||....... . ...|+.+|+..|.+.+..+. +|+.+..
T Consensus 135 ss~a~~~~~--------------~-------------------------~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~ 175 (241)
T d2a4ka1 135 GSVAGLGAF--------------G-------------------------LAHYAAGKLGVVGLARTLALELARKGVRVNV 175 (241)
T ss_dssp CCCTTCCHH--------------H-------------------------HHHHHHCSSHHHHHHHHHHHHHTTTTCEEEE
T ss_pred ccccccccc--------------C-------------------------ccccchhhHHHHHHHHHHHHHHhHhCCEEee
Confidence 554322110 0 05799999999999887765 6899999
Q ss_pred EecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEe
Q psy7538 249 LRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNL 328 (543)
Q Consensus 249 lRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni 328 (543)
+.||.|-.+.. .+. +........+.. ...-+...+|+|+++..++.+... -..|++..+
T Consensus 176 I~PG~v~T~~~-------~~~--~~~~~~~~~~~~---------p~~r~~~p~dva~~v~fL~S~~s~---~itG~~i~v 234 (241)
T d2a4ka1 176 LLPGLIQTPMT-------AGL--PPWAWEQEVGAS---------PLGRAGRPEEVAQAALFLLSEESA---YITGQALYV 234 (241)
T ss_dssp EEECSBCCGGG-------TTS--CHHHHHHHHHTS---------TTCSCBCHHHHHHHHHHHHSGGGT---TCCSCEEEE
T ss_pred eccCcCCCHHH-------Hhh--hHhHHHHHHhCC---------CCCCCcCHHHHHHHHHHHhcchhC---CCcCceEEe
Confidence 99998843322 121 122233332211 112245689999999888865432 135778877
Q ss_pred ecC
Q psy7538 329 TSN 331 (543)
Q Consensus 329 ~s~ 331 (543)
.+|
T Consensus 235 DGG 237 (241)
T d2a4ka1 235 DGG 237 (241)
T ss_dssp STT
T ss_pred CCC
Confidence 766
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.54 E-value=1.9e-13 Score=129.71 Aligned_cols=213 Identities=9% Similarity=0.019 Sum_probs=143.5
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||++-||++++++|++.|. +|++..|++ +.+++ ...+++.+|+
T Consensus 2 LkgK~~lVTGas~GIG~aia~~l~~~Ga---~V~~~~r~~------~~l~~-------------------~~~~~~~~Dv 53 (234)
T d1o5ia_ 2 IRDKGVLVLAASRGIGRAVADVLSQEGA---EVTICARNE------ELLKR-------------------SGHRYVVCDL 53 (234)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHH-------------------TCSEEEECCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCH------HHHHh-------------------cCCcEEEcch
Confidence 5799999999999999999999999997 888888863 33322 1335678899
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEEEEecCcc
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFTYISTAYC 177 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~vST~y~ 177 (543)
++. .+.+.+-+.++|++||+||.... .+.++..+++|+.++..+.+.+... ++-.++|++||..+
T Consensus 54 ~~~-----~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~ 128 (234)
T d1o5ia_ 54 RKD-----LDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSV 128 (234)
T ss_dssp TTC-----HHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred HHH-----HHHHHHHhCCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccc
Confidence 864 23444555689999999986532 2456778999999988887776431 24468999999755
Q ss_pred ccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEEEecCe
Q psy7538 178 HPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMILRPSI 253 (543)
Q Consensus 178 ~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~IlRps~ 253 (543)
..... ....|+.+|+..+.+.+..+. +|+.+..+.|+.
T Consensus 129 ~~~~~--------------------------------------~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~ 170 (234)
T d1o5ia_ 129 ISPIE--------------------------------------NLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGW 170 (234)
T ss_dssp TSCCT--------------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECS
T ss_pred ccccc--------------------------------------ccccchhHHHHHHHHHHHHHHHhcccCeEEeecccCc
Confidence 43211 115899999988888776554 689999999987
Q ss_pred eeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecC
Q psy7538 254 VVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSN 331 (543)
Q Consensus 254 V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~ 331 (543)
|-.+..+ ..... .....+.+. ....-+...+|+|+++..++..... -..|++..+.+|
T Consensus 171 v~T~~~~-------~~~~~-~~~~~~~~~---------~pl~R~~~pediA~~v~fL~S~~s~---~itG~~i~vDGG 228 (234)
T d1o5ia_ 171 TETERVK-------ELLSE-EKKKQVESQ---------IPMRRMAKPEEIASVVAFLCSEKAS---YLTGQTIVVDGG 228 (234)
T ss_dssp BCCTTHH-------HHSCH-HHHHHHHTT---------STTSSCBCHHHHHHHHHHHHSGGGT---TCCSCEEEESTT
T ss_pred cchhhhh-------hhcCH-HHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhChhhc---CCcCcEEEECcc
Confidence 7443211 00111 111222111 1122356789999998877754332 135888888776
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.53 E-value=5.6e-14 Score=135.32 Aligned_cols=228 Identities=11% Similarity=0.097 Sum_probs=150.3
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
.||.++||||++-||++++++|++.|. +|.+..|++ +++++.. +.++. ...++.++.+|++
T Consensus 1 DgKValITGas~GIG~aia~~la~~Ga---~V~i~~r~~------~~l~~~~-----~~l~~-----~g~~~~~~~~Dvs 61 (257)
T d2rhca1 1 DSEVALVTGATSGIGLEIARRLGKEGL---RVFVCARGE------EGLRTTL-----KELRE-----AGVEADGRTCDVR 61 (257)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH-----HHHHH-----TTCCEEEEECCTT
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHH-----HHHHh-----cCCcEEEEEeecC
Confidence 478999999999999999999999997 788888863 3333321 12221 2347889999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc-----cCCceE
Q psy7538 109 QLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM-----KNLKCF 169 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-----~~l~~~ 169 (543)
+++ +++.+++ .+|++||+||.... .+.++..+++|+.|+..+.+.+... ++-.++
T Consensus 62 ~~~------~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~I 135 (257)
T d2rhca1 62 SVP------EIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRI 135 (257)
T ss_dssp CHH------HHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEE
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccc
Confidence 876 5665543 58999999997542 2456778999999999999988642 234689
Q ss_pred EEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCc
Q psy7538 170 TYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMP 245 (543)
Q Consensus 170 V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp 245 (543)
|.+||..+...... ...|+.||+..+.+.+..+. +|+.
T Consensus 136 i~i~S~~~~~~~~~--------------------------------------~~~Y~asKaal~~ltk~lA~el~~~gIr 177 (257)
T d2rhca1 136 VNIASTGGKQGVVH--------------------------------------AAPYSASKHGVVGFTKALGLELARTGIT 177 (257)
T ss_dssp EEECCGGGTSCCTT--------------------------------------CHHHHHHHHHHHHHHHHHHHHTTTSEEE
T ss_pred cccccccccccccc--------------------------------------chhHHHHHHHHHHHHHHHHHHhhhhCcE
Confidence 99999866432110 15899999999998887665 5789
Q ss_pred EEEEecCeeeecCCCCCC-CCCC-CCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCC
Q psy7538 246 CMILRPSIVVPIYKEPLP-GWTD-NINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERK 323 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~-gw~d-~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~ 323 (543)
+..+.|+.|-.+..+... .+.+ ....+......+.... ...-+...+|+|++++.++..... -..|
T Consensus 178 VN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~---------PlgR~~~pedia~~v~fL~S~~s~---~itG 245 (257)
T d2rhca1 178 VNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARV---------PIGRYVQPSEVAEMVAYLIGPGAA---AVTA 245 (257)
T ss_dssp EEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTS---------TTSSCBCHHHHHHHHHHHTSGGGT---TCCS
T ss_pred EEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCchhc---CCcC
Confidence 999999877332110000 0000 0001111222222211 111245689999999888754432 1358
Q ss_pred cEEEeecC
Q psy7538 324 SVCNLTSN 331 (543)
Q Consensus 324 ~vyni~s~ 331 (543)
+++.+.+|
T Consensus 246 ~~i~vDGG 253 (257)
T d2rhca1 246 QALNVCGG 253 (257)
T ss_dssp CEEEESTT
T ss_pred ceEEECcC
Confidence 88888776
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.53 E-value=1.4e-13 Score=132.48 Aligned_cols=171 Identities=17% Similarity=0.163 Sum_probs=123.4
Q ss_pred hhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 26 KTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 26 ~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
+.++||++|||||++-||++++++|++.|. +|++..|.. ++++++. +.++.. ....++.++.+
T Consensus 6 ~~lk~Kv~lITGas~GIG~aiA~~la~~G~---~Vv~~~r~~------~~l~~~~-----~~l~~~---~~~~~~~~~~~ 68 (257)
T d1xg5a_ 6 ERWRDRLALVTGASGGIGAAVARALVQQGL---KVVGCARTV------GNIEELA-----AECKSA---GYPGTLIPYRC 68 (257)
T ss_dssp GGGTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH-----HHHHHT---TCSSEEEEEEC
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHH-----HHHHhc---CCCceEEEEEc
Confidence 358999999999999999999999999997 788888863 3443321 222221 12357889999
Q ss_pred cCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHh----cc-CC
Q psy7538 106 DITQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQ----MK-NL 166 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~l 166 (543)
|+++++ +++.+++ ++|++||+|+.... ++.++..+++|+.|+..+.+.+.+ .+ +-
T Consensus 69 Dls~~~------~v~~~v~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~ 142 (257)
T d1xg5a_ 69 DLSNEE------DILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDD 142 (257)
T ss_dssp CTTCHH------HHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCS
T ss_pred cCCCHH------HHHHHHHHHHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCC
Confidence 999875 6665543 58999999997642 355777899999998888777632 21 23
Q ss_pred ceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHh------
Q psy7538 167 KCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECM------ 240 (543)
Q Consensus 167 ~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~------ 240 (543)
.++|++||..+...... +. ...|+.+|+..+.+.+..+
T Consensus 143 g~Ii~isS~~~~~~~p~--------~~----------------------------~~~Y~~sKaal~~ltr~la~el~~~ 186 (257)
T d1xg5a_ 143 GHIININSMSGHRVLPL--------SV----------------------------THFYSATKYAVTALTEGLRQELREA 186 (257)
T ss_dssp CEEEEECCGGGTSCCSC--------GG----------------------------GHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CceEEEechHhcCCCCC--------cc----------------------------cHHHHHHHHHHHhCHHHHHHHHHhC
Confidence 68999999876432110 00 0469999999998886543
Q ss_pred hcCCcEEEEecCeee
Q psy7538 241 ELGMPCMILRPSIVV 255 (543)
Q Consensus 241 ~~~lp~~IlRps~V~ 255 (543)
.+++.+..+-|+.+-
T Consensus 187 ~~~I~vn~i~PG~i~ 201 (257)
T d1xg5a_ 187 QTHIRATCISPGVVE 201 (257)
T ss_dssp TCCCEEEEEEESCBC
T ss_pred CCCEEEEEEeCCCCC
Confidence 257899999998663
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.51 E-value=1.8e-13 Score=132.20 Aligned_cols=233 Identities=13% Similarity=0.101 Sum_probs=143.6
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||++-||++++++|++.|. +|++..|+. +++++.. +.+... .....++.++.+|+
T Consensus 3 l~gKvalVTGas~GIG~aia~~la~~Ga---~V~~~~r~~------~~l~~~~-----~~l~~~--~~~~~~~~~~~~Dv 66 (264)
T d1spxa_ 3 FAEKVAIITGSSNGIGRATAVLFAREGA---KVTITGRHA------ERLEETR-----QQILAA--GVSEQNVNSVVADV 66 (264)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH-----HHHHHT--TCCGGGEEEEECCT
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHH-----HHHHhc--CCCcCceEEEEccC
Confidence 6899999999999999999999999997 888999874 3333221 122211 11234789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-----------cccHHHHHHHHHHHHHHHHHHHHhc--cCCc
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-----------DEPIKTAVILNTRGTRDMLELSKQM--KNLK 167 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-----------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~l~ 167 (543)
++++ +++++++ ++|++||+||.... .+.++..+++|+.|+..+.+.+... ++-.
T Consensus 67 t~~~------~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g 140 (264)
T d1spxa_ 67 TTDA------GQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKG 140 (264)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccC
Confidence 9876 5665553 68999999986421 1346778999999998888877542 1224
Q ss_pred eEEEEecCcc-ccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----c
Q psy7538 168 CFTYISTAYC-HPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----L 242 (543)
Q Consensus 168 ~~V~vST~y~-~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~ 242 (543)
.+|.++|..+ .... |. ...|+.||+..+.+.+..+. +
T Consensus 141 ~iI~~~S~~~~~~~~----------~~----------------------------~~~Y~asKaal~~lt~~lA~el~~~ 182 (264)
T d1spxa_ 141 EIVNISSIASGLHAT----------PD----------------------------FPYYSIAKAAIDQYTRNTAIDLIQH 182 (264)
T ss_dssp EEEEECCTTSSSSCC----------TT----------------------------SHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred cceeeeeeccccccC----------CC----------------------------chhhhhhhhhHHHHHHHHHHHhccc
Confidence 6666666533 2111 00 15799999999888877654 6
Q ss_pred CCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCC
Q psy7538 243 GMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322 (543)
Q Consensus 243 ~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~ 322 (543)
|+.+..+.||.|-.+........-+................ ...-+...+|+|++++.++..+.. +-..
T Consensus 183 gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~---------Pl~R~g~pedvA~~v~fL~S~~~s--~~it 251 (264)
T d1spxa_ 183 GIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECV---------PAGVMGQPQDIAEVIAFLADRKTS--SYII 251 (264)
T ss_dssp TCEEEEEEECCBCCCC--------------HHHHHHHHHHC---------TTSSCBCHHHHHHHHHHHHCHHHH--TTCC
T ss_pred CeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCCccc--CCcc
Confidence 89999999998854322110000000000011111111100 011244579999999887753321 0125
Q ss_pred CcEEEeecC
Q psy7538 323 KSVCNLTSN 331 (543)
Q Consensus 323 ~~vyni~s~ 331 (543)
|+++.+.+|
T Consensus 252 G~~i~vDGG 260 (264)
T d1spxa_ 252 GHQLVVDGG 260 (264)
T ss_dssp SCEEEESTT
T ss_pred CceEEeCCC
Confidence 888888766
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.51 E-value=2.2e-13 Score=130.87 Aligned_cols=226 Identities=10% Similarity=0.043 Sum_probs=145.0
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|.++||||++-||+.++++|++.|. +|.+..|++ ++++++. +.++ ....++.++.+|++++
T Consensus 2 KValITGas~GIG~aia~~la~~Ga---~V~~~~r~~------~~l~~~~-----~~i~-----~~g~~~~~~~~Dv~~~ 62 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKDGF---AVAIADYND------ATAKAVA-----SEIN-----QAGGHAVAVKVDVSDR 62 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH-----HHHH-----HTTCCEEEEECCTTSH
T ss_pred CEEEEcCCccHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHH-----HHHH-----hcCCcEEEEEeeCCCH
Confidence 4569999999999999999999996 788888864 3333321 1122 1235788999999987
Q ss_pred CCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHh----ccCCceEEEE
Q psy7538 111 KLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQ----MKNLKCFTYI 172 (543)
Q Consensus 111 ~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~----~~~l~~~V~v 172 (543)
+ +++.+++ ++|++||+||.... .+.++..+++|+.|+.++.+.+.. .++-.++|++
T Consensus 63 ~------~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~i 136 (255)
T d1gega_ 63 D------QVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINA 136 (255)
T ss_dssp H------HHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEE
T ss_pred H------HHHHHHHHHHHHhCCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccc
Confidence 6 5665543 58999999996542 245677899999999999887643 2234679999
Q ss_pred ecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEE
Q psy7538 173 STAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMI 248 (543)
Q Consensus 173 ST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~I 248 (543)
||..+..... ....|+.||+..+.+.+..+. +|+.+..
T Consensus 137 sS~~~~~~~~--------------------------------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~ 178 (255)
T d1gega_ 137 CSQAGHVGNP--------------------------------------ELAVYSSSKFAVRGLTQTAARDLAPLGITVNG 178 (255)
T ss_dssp CCGGGTSCCT--------------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred cchhhcccCc--------------------------------------ccccchhCHHHHHhhHHHHHHHhhhhCcEEEE
Confidence 9986643211 015899999999988877654 6899999
Q ss_pred EecCeeeecCCCCCCCCC-CCC-CchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 249 LRPSIVVPIYKEPLPGWT-DNI-NGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 249 lRps~V~G~~~~p~~gw~-d~~-~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
+.|+.|-.+..+..+... +.. .........+.+. ....-+...+|+|+++..++..... -..|++.
T Consensus 179 I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~pl~R~~~peevA~~v~fL~S~~a~---~itG~~i 246 (255)
T d1gega_ 179 YCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKR---------ITLGRLSEPEDVAACVSYLASPDSD---YMTGQSL 246 (255)
T ss_dssp EEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTT---------CTTCSCBCHHHHHHHHHHHHSGGGT---TCCSCEE
T ss_pred EecCcccChHHhhhhhhhHhhhcccchhHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCchhC---CccCcEE
Confidence 999977332100000000 000 0000001111111 1112245689999998887754332 1357888
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
.+.+|
T Consensus 247 ~vDGG 251 (255)
T d1gega_ 247 LIDGG 251 (255)
T ss_dssp EESSS
T ss_pred EecCC
Confidence 88776
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.50 E-value=3e-13 Score=131.51 Aligned_cols=226 Identities=13% Similarity=0.137 Sum_probs=145.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||++-||++++++|++.|. +|.+..|+. ++++++.+ ....++..+.+|+
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~Ga---~V~i~~r~~------~~l~~~~~-------------~~~~~~~~~~~Dv 60 (276)
T d1bdba_ 3 LKGEAVLITGGASGLGRALVDRFVAEGA---KVAVLDKSA------ERLAELET-------------DHGDNVLGIVGDV 60 (276)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHHH-------------HHGGGEEEEECCT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHHH-------------HcCCCeeEEeccc
Confidence 5799999999999999999999999996 888988863 45544321 1124788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC--------c----ccHHHHHHHHHHHHHHHHHHHHhc--cCC
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF--------D----EPIKTAVILNTRGTRDMLELSKQM--KNL 166 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~--------~----~~~~~~~~~Nv~gt~~ll~~a~~~--~~l 166 (543)
++++ +++.+++ .+|+++|+|+.... . +.++..+++|+.|+..+.+++... ++-
T Consensus 61 ~~~~------~~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~ 134 (276)
T d1bdba_ 61 RSLE------DQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR 134 (276)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred ccHH------HHHHHHHHHHHHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 9875 5555543 68999999986432 1 236778999999998888777431 112
Q ss_pred ceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh---cC
Q psy7538 167 KCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME---LG 243 (543)
Q Consensus 167 ~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~---~~ 243 (543)
.++|++||..+..... . ...|+.||+..+.+.+..+. .+
T Consensus 135 g~iI~i~S~~~~~~~~----------~----------------------------~~~Y~asKaal~~ltr~lA~ela~~ 176 (276)
T d1bdba_ 135 GNVIFTISNAGFYPNG----------G----------------------------GPLYTAAKHAIVGLVRELAFELAPY 176 (276)
T ss_dssp CEEEEECCGGGTSTTS----------S----------------------------CHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCceeeeechhccCCC----------C----------------------------CchHHHHHHHHHHHHHHHHHHhhcc
Confidence 5888888875532211 0 15799999999888877654 35
Q ss_pred CcEEEEecCeeeecCCCCCCCCCCCC-CchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhh-cccCCCC
Q psy7538 244 MPCMILRPSIVVPIYKEPLPGWTDNI-NGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDF-LNSKESE 321 (543)
Q Consensus 244 lp~~IlRps~V~G~~~~p~~gw~d~~-~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~-~~~~~~~ 321 (543)
+.+..+.|+.|-.+...+...+.... .....+...+....+ ..-+...+|+|++++.++... .. -.
T Consensus 177 IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~P---------lgR~g~peeva~~v~fL~S~~~a~---~i 244 (276)
T d1bdba_ 177 VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLP---------IGRMPEVEEYTGAYVFFATRGDAA---PA 244 (276)
T ss_dssp CEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCT---------TSSCCCGGGGSHHHHHHHCHHHHT---TC
T ss_pred eEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCCcccC---Ce
Confidence 99999999988544332211111000 000011111111111 111345688999887765422 21 13
Q ss_pred CCcEEEeecC
Q psy7538 322 RKSVCNLTSN 331 (543)
Q Consensus 322 ~~~vyni~s~ 331 (543)
.|++.++.+|
T Consensus 245 tG~~i~VDGG 254 (276)
T d1bdba_ 245 TGALLNYDGG 254 (276)
T ss_dssp SSCEEEESSS
T ss_pred eCcEEEECcC
Confidence 5889998776
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.50 E-value=3.7e-13 Score=129.73 Aligned_cols=227 Identities=12% Similarity=0.101 Sum_probs=148.6
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||++-||++++++|++.|. +|++..|+.+. ..+..+++ .+ ....++..+.+|+
T Consensus 7 l~gK~alITGas~GIG~aia~~la~~Ga---~V~i~~r~~~~--~~~~~~~~---------~~----~~g~~~~~~~~Dv 68 (260)
T d1h5qa_ 7 FVNKTIIVTGGNRGIGLAFTRAVAAAGA---NVAVIYRSAAD--AVEVTEKV---------GK----EFGVKTKAYQCDV 68 (260)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHTTE---EEEEEESSCTT--HHHHHHHH---------HH----HHTCCEEEEECCT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHHH--HHHHHHHH---------HH----HhCCceEEEEccC
Confidence 6899999999999999999999999986 89999997643 22222222 11 1224788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHh----ccCCceE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQ----MKNLKCF 169 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~----~~~l~~~ 169 (543)
++++ +++++++ .+|++||+|+.... .+.++..+++|+.|+..+.+.+.. .+.-..+
T Consensus 69 ~~~~------~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i 142 (260)
T d1h5qa_ 69 SNTD------IVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSI 142 (260)
T ss_dssp TCHH------HHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CCHH------HHHHHHHHHHHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEE
Confidence 9876 6666553 58999999986532 245677899999999888776643 2244566
Q ss_pred EEEecCccccCCC-cccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCC
Q psy7538 170 TYISTAYCHPSEK-VLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGM 244 (543)
Q Consensus 170 V~vST~y~~~~~~-~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~l 244 (543)
+.+|+........ .+. +. .....|+.+|+..+.+.+..+. +|+
T Consensus 143 ~~~~s~~~~~~~~~~~~----~~----------------------------~~~~~Y~asKaal~~lt~~lA~el~~~gI 190 (260)
T d1h5qa_ 143 VVTSSMSSQIINQSSLN----GS----------------------------LTQVFYNSSKAACSNLVKGLAAEWASAGI 190 (260)
T ss_dssp EEECCGGGTSCCEEETT----EE----------------------------CSCHHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred EEeeccccccccccccc----cC----------------------------ccccchhhhhhhHHHHHHHHHHHhchhCe
Confidence 6666664432211 000 00 0115899999999988877654 689
Q ss_pred cEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCc
Q psy7538 245 PCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKS 324 (543)
Q Consensus 245 p~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~ 324 (543)
.+..+.|+.|-.+... +. +...........+ ..-+...+|+|++++.++..... -..|+
T Consensus 191 rvN~I~PG~i~T~~~~----~~-----~~~~~~~~~~~~p---------l~R~g~pedvA~~v~fL~S~~s~---~itG~ 249 (260)
T d1h5qa_ 191 RVNALSPGYVNTDQTA----HM-----DKKIRDHQASNIP---------LNRFAQPEEMTGQAILLLSDHAT---YMTGG 249 (260)
T ss_dssp EEEEEEECSBCCGGGG----GS-----CHHHHHHHHHTCT---------TSSCBCGGGGHHHHHHHHSGGGT---TCCSC
T ss_pred EEeecCCCcccCcchh----cc-----CHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhcchhC---CCcCc
Confidence 9999999988543221 11 1123233222211 11234578899998877754432 13588
Q ss_pred EEEeecC
Q psy7538 325 VCNLTSN 331 (543)
Q Consensus 325 vyni~s~ 331 (543)
++.+.+|
T Consensus 250 ~i~VDGG 256 (260)
T d1h5qa_ 250 EYFIDGG 256 (260)
T ss_dssp EEEECTT
T ss_pred eEEECCC
Confidence 8888776
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.49 E-value=2.1e-12 Score=125.16 Aligned_cols=231 Identities=12% Similarity=0.069 Sum_probs=149.0
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||+|-||+.++++|++.|. +|++..|+.. ++++++ .+.++ ....++.++.+|+
T Consensus 16 L~gK~~lITGas~GIG~aia~~la~~Ga---~Vvi~~~~~~-----~~~~~~-----~~~~~-----~~g~~~~~~~~D~ 77 (272)
T d1g0oa_ 16 LEGKVALVTGAGRGIGREMAMELGRRGC---KVIVNYANST-----ESAEEV-----VAAIK-----KNGSDAACVKANV 77 (272)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSCH-----HHHHHH-----HHHHH-----HTTCCEEEEECCT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCC---EEEEEeCCch-----HHHHHH-----HHHHH-----hhCCceeeEeCCC
Confidence 7899999999999999999999999997 7888877642 222222 11122 2235788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHh-ccCCceEEEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQ-MKNLKCFTYI 172 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-~~~l~~~V~v 172 (543)
++++ +++.+++ .+|+++|.|+.... .+.++..+++|+.|+..+.+++.. +..-.+.+.+
T Consensus 78 ~~~~------~v~~~~~~~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i 151 (272)
T d1g0oa_ 78 GVVE------DIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILM 151 (272)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred CCHH------HHHHHHHHHHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccc
Confidence 9875 5655543 58999999987643 244667899999999999998865 3333578888
Q ss_pred ecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEE
Q psy7538 173 STAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMI 248 (543)
Q Consensus 173 ST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~I 248 (543)
+|.++..... .....|+.||+..+.+.+..+. +|+.+..
T Consensus 152 ~s~~~~~~~~-------------------------------------~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~ 194 (272)
T d1g0oa_ 152 GSITGQAKAV-------------------------------------PKHAVYSGSKGAIETFARCMAIDMADKKITVNV 194 (272)
T ss_dssp CCGGGTCSSC-------------------------------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEE
T ss_pred cccccccccc-------------------------------------cchhhHHHHHHHHHHHHHHHHHHhchhCeEEEE
Confidence 8775432111 0115799999999888876554 6899999
Q ss_pred EecCeeeecCCCCC-CCCCC--CCCchHHHHHH-HhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCc
Q psy7538 249 LRPSIVVPIYKEPL-PGWTD--NINGPTGLLIG-AGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKS 324 (543)
Q Consensus 249 lRps~V~G~~~~p~-~gw~d--~~~g~~~~~~~-~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~ 324 (543)
+.||.|-.+..... ..+.. ........... ..... ..--+...+|||++++.++..... -..|+
T Consensus 195 I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------PlgR~~~peevA~~v~fL~s~~s~---~itG~ 262 (272)
T d1g0oa_ 195 VAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWS---------PLRRVGLPIDIARVVCFLASNDGG---WVTGK 262 (272)
T ss_dssp EEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSC---------TTCSCBCHHHHHHHHHHHHSGGGT---TCCSC
T ss_pred EccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccC---------CCCCCcCHHHHHHHHHHHhCchhc---CccCc
Confidence 99998743311000 00000 00001111110 11111 111356679999999988765432 13577
Q ss_pred EEEeecC
Q psy7538 325 VCNLTSN 331 (543)
Q Consensus 325 vyni~s~ 331 (543)
+..+.+|
T Consensus 263 ~i~vDGG 269 (272)
T d1g0oa_ 263 VIGIDGG 269 (272)
T ss_dssp EEEESTT
T ss_pred eEeECCC
Confidence 8877766
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.49 E-value=8.9e-14 Score=132.63 Aligned_cols=164 Identities=19% Similarity=0.197 Sum_probs=121.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
.+||+++||||++-||++++++|++.|. +|++..|++ ++++++. +.++ ....++..+.+|+
T Consensus 5 l~Gkv~lITGas~GIG~~ia~~la~~G~---~V~l~~r~~------~~l~~~~-----~~~~-----~~~~~~~~~~~Dv 65 (244)
T d1yb1a_ 5 VTGEIVLITGAGHGIGRLTAYEFAKLKS---KLVLWDINK------HGLEETA-----AKCK-----GLGAKVHTFVVDC 65 (244)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH-----HHHH-----HTTCCEEEEECCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHH-----HHHH-----hcCCcEEEEEeeC
Confidence 5799999999999999999999999986 899999964 3443321 1122 2235789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHh-c--cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQ-M--KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--~~l~~~V 170 (543)
++++ +++.+++ .+|++||+|+.... .+.++..+++|+.|+.++.+.+.. + ++-.++|
T Consensus 66 s~~~------~v~~~~~~i~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv 139 (244)
T d1yb1a_ 66 SNRE------DIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIV 139 (244)
T ss_dssp TCHH------HHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEE
Confidence 9986 5555443 58999999997643 134567899999999988887643 2 2456899
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-------cC
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-------LG 243 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-------~~ 243 (543)
++||..+...... ...|+.||+..+.+.+..+. .|
T Consensus 140 ~isS~~~~~~~~~--------------------------------------~~~Y~asKaal~~~~~~La~El~~~~~~g 181 (244)
T d1yb1a_ 140 TVASAAGHVSVPF--------------------------------------LLAYCSSKFAAVGFHKTLTDELAALQITG 181 (244)
T ss_dssp EECCCC-CCCHHH--------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHTTCTT
T ss_pred EeecchhcCCCCC--------------------------------------cHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 9999976432110 05899999988887766543 36
Q ss_pred CcEEEEecCee
Q psy7538 244 MPCMILRPSIV 254 (543)
Q Consensus 244 lp~~IlRps~V 254 (543)
+.+..+.||.|
T Consensus 182 I~V~~i~PG~v 192 (244)
T d1yb1a_ 182 VKTTCLCPNFV 192 (244)
T ss_dssp EEEEEEEETHH
T ss_pred EEEEEEEcCCC
Confidence 88999999976
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.49 E-value=2.7e-13 Score=130.38 Aligned_cols=221 Identities=13% Similarity=0.106 Sum_probs=143.8
Q ss_pred cCCCEEEEEcCcc--hhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 28 YENKSIFLSGGSG--FLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 28 ~~~~~VlITGatG--FiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
++||+++||||+| -||++++++|++.|. +|.+..|+.+. .+..++. . ....+..++.+
T Consensus 6 L~gK~alITGas~~~GIG~aiA~~la~~Ga---~V~i~~~~~~~---~~~~~~~---------~-----~~~~~~~~~~~ 65 (256)
T d1ulua_ 6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGA---EVALSYQAERL---RPEAEKL---------A-----EALGGALLFRA 65 (256)
T ss_dssp CTTCEEEEESCCCSSSHHHHHHHHHHHTTC---EEEEEESSGGG---HHHHHHH---------H-----HHTTCCEEEEC
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHCCC---EEEEEeCcHHH---HHHHHHh---------h-----hccCccccccc
Confidence 5899999999998 699999999999997 77777776422 1111111 1 11235678899
Q ss_pred cCCCCCCCCCHHHHHHHhc-------CccEEEEcCccCC-------C----cccHHHHHHHHHHHHHHHHHHHHhc-cCC
Q psy7538 106 DITQLKLGISEIDKKELID-------NVDIVYHVAATIR-------F----DEPIKTAVILNTRGTRDMLELSKQM-KNL 166 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~-------~----~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l 166 (543)
|+++++ +++.+++ ++|++||+|+... + .+.+...+++|+.++..+.+.+... ++-
T Consensus 66 D~~~~~------~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~ 139 (256)
T d1ulua_ 66 DVTQDE------ELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREG 139 (256)
T ss_dssp CTTCHH------HHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE
T ss_pred ccCCHH------HHHHHHHHHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccC
Confidence 999875 6666543 5899999998642 1 1235567899999999998887643 222
Q ss_pred ceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----c
Q psy7538 167 KCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----L 242 (543)
Q Consensus 167 ~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~ 242 (543)
.++|++||..+..... ....|+.||+..+.+.+..+. +
T Consensus 140 G~Iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaal~~ltr~lA~ela~~ 181 (256)
T d1ulua_ 140 GGIVTLTYYASEKVVP--------------------------------------KYNVMAIAKAALEASVRYLAYELGPK 181 (256)
T ss_dssp EEEEEEECGGGTSBCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred CEEEEEeehHhcCCCC--------------------------------------CchHHHHHHHHHHHHHHHHHHHhccc
Confidence 5899999986643211 116899999999999877655 6
Q ss_pred CCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCC
Q psy7538 243 GMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322 (543)
Q Consensus 243 ~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~ 322 (543)
|+.+..+.|+.|..+.....+ ..........+..+ ..-+...+|+|++++.++..... -..
T Consensus 182 gIrVN~I~PG~i~t~~~~~~~-------~~~~~~~~~~~~~p---------l~R~~~pedvA~~v~fL~S~~s~---~it 242 (256)
T d1ulua_ 182 GVRVNAISAGPVRTVAARSIP-------GFTKMYDRVAQTAP---------LRRNITQEEVGNLGLFLLSPLAS---GIT 242 (256)
T ss_dssp TCEEEEEEECCC-----------------CHHHHHHHHHHST---------TSSCCCHHHHHHHHHHHHSGGGT---TCC
T ss_pred CCEEeeeccceeeeccccchh-------hhHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCchhC---Ccc
Confidence 899999999988654332111 11122222222111 11245679999998887755432 135
Q ss_pred CcEEEeecC
Q psy7538 323 KSVCNLTSN 331 (543)
Q Consensus 323 ~~vyni~s~ 331 (543)
|+++.+.+|
T Consensus 243 G~~i~VDGG 251 (256)
T d1ulua_ 243 GEVVYVDAG 251 (256)
T ss_dssp SCEEEESTT
T ss_pred CCeEEECcC
Confidence 788888766
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.47 E-value=8.3e-13 Score=125.59 Aligned_cols=197 Identities=16% Similarity=0.163 Sum_probs=135.4
Q ss_pred EEEEEcCcchhHHHHHHHHHhhCCCc----CEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 32 SIFLSGGSGFLGKVLIEKILRLEPNV----KKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 32 ~VlITGatGFiG~~Lv~~Ll~~g~~v----~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
.|+||||++-||++++++|.+.|..+ ..|.+..|+. ++++++. +.+ .....++.++.+|+
T Consensus 3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~------~~l~~~~-----~~~-----~~~g~~~~~~~~Dv 66 (240)
T d2bd0a1 3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTA------ADLEKIS-----LEC-----RAEGALTDTITADI 66 (240)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCH------HHHHHHH-----HHH-----HTTTCEEEEEECCT
T ss_pred EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCH------HHHHHHH-----HHH-----HhcCCcEEEEEecC
Confidence 48999999999999999999999742 1367777753 3333221 111 22335788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFT 170 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V 170 (543)
++++ +++++++ ++|++||+|+.... .+.++..+++|+.|+..+.+.+... .+-.++|
T Consensus 67 t~~~------~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii 140 (240)
T d2bd0a1 67 SDMA------DVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIF 140 (240)
T ss_dssp TSHH------HHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceE
Confidence 9976 5655543 58999999997643 2556778999999999888777542 1346899
Q ss_pred EEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcE
Q psy7538 171 YISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPC 246 (543)
Q Consensus 171 ~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~ 246 (543)
++||..+..... ....|+.||+..+.+.+..+. +|+.+
T Consensus 141 ~isS~~~~~~~~--------------------------------------~~~~Y~asK~al~~lt~~la~el~~~gIrv 182 (240)
T d2bd0a1 141 FITSVAATKAFR--------------------------------------HSSIYCMSKFGQRGLVETMRLYARKCNVRI 182 (240)
T ss_dssp EECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEE
T ss_pred EEechhhcCCCC--------------------------------------CChHHHHHHHHHHHHHHHHHHHhCcCCeEE
Confidence 999986643211 015899999988888776544 68999
Q ss_pred EEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhc
Q psy7538 247 MILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFL 315 (543)
Q Consensus 247 ~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~ 315 (543)
..+.||.|-.+..+.. + .+....+...+|+|++++.++..+.
T Consensus 183 n~i~PG~v~T~~~~~~----~-----------------------~~~~~~~~~PedvA~~v~~l~s~~~ 224 (240)
T d2bd0a1 183 TDVQPGAVYTPMWGKV----D-----------------------DEMQALMMMPEDIAAPVVQAYLQPS 224 (240)
T ss_dssp EEEEECCBCSTTTCCC----C-----------------------STTGGGSBCHHHHHHHHHHHHTSCT
T ss_pred EEeeeCcccCchhhhc----C-----------------------HhhHhcCCCHHHHHHHHHHHHcCCc
Confidence 9999997743321110 0 1111234456999999988876543
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.46 E-value=3.7e-13 Score=128.36 Aligned_cols=219 Identities=12% Similarity=0.116 Sum_probs=144.6
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
+.|+||||++-||+.++++|++.|. +|.+..++.. ++++++ -+.++ ....++.++.+|++++
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga---~V~i~~~~~~-----~~~~~~-----~~~~~-----~~g~~~~~~~~Dv~~~ 63 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGC---KVLVNYARSA-----KAAEEV-----SKQIE-----AYGGQAITFGGDVSKE 63 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCH-----HHHHHH-----HHHHH-----HHTCEEEEEECCTTSH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCCH-----HHHHHH-----HHHHH-----HcCCcEEEEeCCCCCH
Confidence 4799999999999999999999997 7777655431 222221 11121 1235788999999987
Q ss_pred CCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEEEEe
Q psy7538 111 KLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFTYIS 173 (543)
Q Consensus 111 ~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~vS 173 (543)
+ +++.+++ ++|++||+|+.... .+.++..+++|+.|+..+.+.+... .+-.++|++|
T Consensus 64 ~------~v~~~~~~~~~~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnis 137 (244)
T d1edoa_ 64 A------DVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIA 137 (244)
T ss_dssp H------HHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred H------HHHHHHHHHHHHcCCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEc
Confidence 5 6665543 58999999997642 2556778999999999888877542 2457999999
Q ss_pred cCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEEE
Q psy7538 174 TAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMIL 249 (543)
Q Consensus 174 T~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~Il 249 (543)
|..+..... ....|+.||+..+.+.+..+. +|+.+..+
T Consensus 138 S~~~~~~~~--------------------------------------~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I 179 (244)
T d1edoa_ 138 SVVGLIGNI--------------------------------------GQANYAAAKAGVIGFSKTAAREGASRNINVNVV 179 (244)
T ss_dssp CTHHHHCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred ChhhcCCCC--------------------------------------CCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEE
Confidence 986643211 016899999999988877655 68999999
Q ss_pred ecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEee
Q psy7538 250 RPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLT 329 (543)
Q Consensus 250 Rps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~ 329 (543)
.||.|-.+..+ .+ . ........... ...-+...+|+|+++..++..+.. .-..|++..+.
T Consensus 180 ~PG~i~T~~~~-------~~-~-~~~~~~~~~~~---------pl~R~~~p~dvA~~v~fLa~S~~a--~~itG~~i~vd 239 (244)
T d1edoa_ 180 CPGFIASDMTA-------KL-G-EDMEKKILGTI---------PLGRTGQPENVAGLVEFLALSPAA--SYITGQAFTID 239 (244)
T ss_dssp EECSBCSHHHH-------TT-C-HHHHHHHHTSC---------TTCSCBCHHHHHHHHHHHHHCSGG--GGCCSCEEEES
T ss_pred ecceeccHHHH-------Hh-h-HHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHHCCchh--cCCcCCeEEeC
Confidence 99877433211 11 1 11222222111 112245679999998876533221 01357888887
Q ss_pred cC
Q psy7538 330 SN 331 (543)
Q Consensus 330 s~ 331 (543)
+|
T Consensus 240 GG 241 (244)
T d1edoa_ 240 GG 241 (244)
T ss_dssp TT
T ss_pred CC
Confidence 66
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.46 E-value=6.9e-13 Score=126.58 Aligned_cols=225 Identities=16% Similarity=0.098 Sum_probs=147.8
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||+|-||++++++|+++|. +|++..|++ ++++++. ...++.....|+
T Consensus 4 l~gK~alITGas~GIG~aia~~la~~G~---~Vi~~~r~~------~~l~~~~---------------~~~~~~~~~~d~ 59 (245)
T d2ag5a1 4 LDGKVIILTAAAQGIGQAAALAFAREGA---KVIATDINE------SKLQELE---------------KYPGIQTRVLDV 59 (245)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHGGGG---------------GSTTEEEEECCT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCC---EEEEEeCCH------HHHHHHH---------------hccCCceeeeec
Confidence 7899999999999999999999999997 888998863 3443321 123567777787
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEEEEecCcc
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFTYISTAYC 177 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~vST~y~ 177 (543)
...+ ..+....-+.++|++||+|+.... .+.++..+++|+.|+..+.+.+... .+-.++|++||..+
T Consensus 60 ~~~~---~~~~~~~~~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~ 136 (245)
T d2ag5a1 60 TKKK---QIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVAS 136 (245)
T ss_dssp TCHH---HHHHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBT
T ss_pred cccc---cccccccccccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhh
Confidence 7543 112223334579999999997653 2456778999999999998877542 24468999998754
Q ss_pred ccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEEEecCe
Q psy7538 178 HPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMILRPSI 253 (543)
Q Consensus 178 ~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~IlRps~ 253 (543)
.-. +.+ ....|+.+|+..+.+++..+. +|+.+..+.||.
T Consensus 137 ~~~---------~~~----------------------------~~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~ 179 (245)
T d2ag5a1 137 SVK---------GVV----------------------------NRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGT 179 (245)
T ss_dssp TTB---------CCT----------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESC
T ss_pred ccC---------Ccc----------------------------chhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeece
Confidence 210 000 116899999999998887665 689999999998
Q ss_pred eeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecC
Q psy7538 254 VVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSN 331 (543)
Q Consensus 254 V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~ 331 (543)
|-.+...... .....+......+.... ...-+.-.+|+++++..++.+... -..|++..+.+|
T Consensus 180 i~T~~~~~~~---~~~~~~~~~~~~~~~~~---------pl~R~~~pedva~~v~fL~s~~s~---~iTG~~i~VDGG 242 (245)
T d2ag5a1 180 VDTPSLQERI---QARGNPEEARNDFLKRQ---------KTGRFATAEEIAMLCVYLASDESA---YVTGNPVIIDGG 242 (245)
T ss_dssp EECHHHHHHH---HHSSSHHHHHHHHHHTC---------TTSSCEEHHHHHHHHHHHHSGGGT---TCCSCEEEECTT
T ss_pred eechhhHhhh---hhhhhhHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhChhhC---CCcCceEEeCCC
Confidence 8544211000 00011111222222111 112245679999999888865432 135888888776
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.44 E-value=1.1e-12 Score=126.15 Aligned_cols=229 Identities=16% Similarity=0.086 Sum_probs=147.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+|+||||+|-||+++++.|++.|+ +|++..|.... ..+++.+. + .....++..+.+|+
T Consensus 4 L~GK~alITGas~GIG~aia~~la~~G~---~Vvi~~~~~~~--~~~~~~~~--------~-----~~~g~~~~~~~~D~ 65 (259)
T d1ja9a_ 4 LAGKVALTTGAGRGIGRGIAIELGRRGA---SVVVNYGSSSK--AAEEVVAE--------L-----KKLGAQGVAIQADI 65 (259)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSCHH--HHHHHHHH--------H-----HHTTCCEEEEECCT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCC---EEEEEcCCChH--HHHHHHHH--------H-----HHcCCCceEecCCC
Confidence 6799999999999999999999999997 77776665421 11222221 1 12235788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc-cCCceEEEE
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM-KNLKCFTYI 172 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~v 172 (543)
++++ +++.+++ .+|++||+|+.... .+.++..+++|+.+...+++.+... ++-.+.+.+
T Consensus 66 ~~~~------~v~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii 139 (259)
T d1ja9a_ 66 SKPS------EVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILT 139 (259)
T ss_dssp TSHH------HHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCccccc
Confidence 9875 5555443 58999999997632 2446678999999999998888653 222466666
Q ss_pred ecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEE
Q psy7538 173 STAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMI 248 (543)
Q Consensus 173 ST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~I 248 (543)
+|..+.-. +. | ....|+.||+..+.+.+..+. +|+.+..
T Consensus 140 ~s~~~~~~--~~-------~----------------------------~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~ 182 (259)
T d1ja9a_ 140 SSIAAVMT--GI-------P----------------------------NHALYAGSKAAVEGFCRAFAVDCGAKGVTVNC 182 (259)
T ss_dssp CCGGGTCC--SC-------C----------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEE
T ss_pred cccccccc--CC-------C----------------------------CchhHHHHHHHHHHHHHHHHHHHhhcCeEEec
Confidence 66543211 00 0 015899999988888876654 6899999
Q ss_pred EecCeeeecCC------CCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCC
Q psy7538 249 LRPSIVVPIYK------EPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322 (543)
Q Consensus 249 lRps~V~G~~~------~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~ 322 (543)
+.||.|-.+.. .+...+ ....+..+...+.... ...-+...+||+++++.++..... . ..
T Consensus 183 I~PG~i~T~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~---------pl~R~g~p~eVa~~v~fL~S~~a~-~--it 248 (259)
T d1ja9a_ 183 IAPGGVKTDMFDENSWHYAPGGY--KGMPQEKIDEGLANMN---------PLKRIGYPADIGRAVSALCQEESE-W--IN 248 (259)
T ss_dssp EEECCBSSHHHHHHGGGTSTTCC--TTCCHHHHHHHHHHTS---------TTSSCBCHHHHHHHHHHHHSGGGT-T--CC
T ss_pred cCcCCccChhhhhhhhhhhhhhc--ccCCHHHHHHHHHhCC---------CCCCCcCHHHHHHHHHHHhCchhc-C--Cc
Confidence 99998743210 000000 0011112222222221 122356789999999988866542 1 35
Q ss_pred CcEEEeecC
Q psy7538 323 KSVCNLTSN 331 (543)
Q Consensus 323 ~~vyni~s~ 331 (543)
|++..+.+|
T Consensus 249 G~~i~vDGG 257 (259)
T d1ja9a_ 249 GQVIKLTGG 257 (259)
T ss_dssp SCEEEESTT
T ss_pred CceEEeCCC
Confidence 778887765
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.43 E-value=6e-13 Score=130.85 Aligned_cols=216 Identities=13% Similarity=0.146 Sum_probs=138.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCC---HHHHHHHHhcCchhHHHHhhcCcCCCCceEEEE
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKT---PNQRVEELFESPVFDALKTLRGKSILQKIQVIS 104 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~---~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~ 104 (543)
++||+++||||++-||+.++++|++.|. +|.+..|...... ..+.++++. +.+. .+...+.
T Consensus 5 l~gKvalITGas~GIG~aiA~~la~~Ga---~Vvi~d~~~~~~~~~~~~~~~~~~~-----~~~~--------~~~~~~~ 68 (302)
T d1gz6a_ 5 FDGRVVLVTGAGGGLGRAYALAFAERGA---LVVVNDLGGDFKGVGKGSSAADKVV-----EEIR--------RRGGKAV 68 (302)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEECCCBCTTSCBCCSHHHHHHH-----HHHH--------HTTCEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHcCC---EEEEEeCCchhhhhhhhHHHHHHHH-----HHHh--------hcccccc
Confidence 6899999999999999999999999997 7888877643211 112222211 1111 1223455
Q ss_pred ccCCCCCCCCCHHHHHHHh---cCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEEE
Q psy7538 105 GDITQLKLGISEIDKKELI---DNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFTY 171 (543)
Q Consensus 105 gDl~~~~lgls~~~~~~l~---~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~ 171 (543)
+|+++.+- .++.++.+. .++|++||+||.... .+.++..+++|+.|+..+.+.+... .+-.++|+
T Consensus 69 ~d~~~~~~--~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~ 146 (302)
T d1gz6a_ 69 ANYDSVEA--GEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIM 146 (302)
T ss_dssp EECCCGGG--HHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred cccchHHH--HHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEE
Confidence 67777641 011122222 369999999997643 2456778999999999998876442 24469999
Q ss_pred EecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEE
Q psy7538 172 ISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCM 247 (543)
Q Consensus 172 vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~ 247 (543)
+||..+..... ....|+.||+..+.+.+..+. +|+.+.
T Consensus 147 isS~~~~~~~~--------------------------------------~~~~Y~asKaal~~lt~~la~E~~~~gIrVN 188 (302)
T d1gz6a_ 147 TASASGIYGNF--------------------------------------GQANYSAAKLGLLGLANTLVIEGRKNNIHCN 188 (302)
T ss_dssp ECCHHHHHCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEE
T ss_pred eCChhhcCCCC--------------------------------------CcHHHHHHHHHHHHHHHHHHHHHhccCCcee
Confidence 99986532211 016899999999888876654 689999
Q ss_pred EEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEE
Q psy7538 248 ILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCN 327 (543)
Q Consensus 248 IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyn 327 (543)
.+.|+.+-..... ..+.. ....+..+|+|++++.++..... ..|+++.
T Consensus 189 ~I~PG~~~t~~~~---------~~~~~-------------------~~~~~~PedvA~~v~fL~S~~a~----itG~~i~ 236 (302)
T d1gz6a_ 189 TIAPNAGSRMTET---------VMPED-------------------LVEALKPEYVAPLVLWLCHESCE----ENGGLFE 236 (302)
T ss_dssp EEEEECCSTTTGG---------GSCHH-------------------HHHHSCGGGTHHHHHHHTSTTCC----CCSCEEE
T ss_pred eeCCCCCCcchhh---------cCcHh-------------------hHhcCCHHHHHHHHHHHcCCCcC----CCCcEEE
Confidence 9999865222111 00111 11223458899998887643222 3577777
Q ss_pred eecC
Q psy7538 328 LTSN 331 (543)
Q Consensus 328 i~s~ 331 (543)
+.+|
T Consensus 237 vdGG 240 (302)
T d1gz6a_ 237 VGAG 240 (302)
T ss_dssp EETT
T ss_pred eCCC
Confidence 7655
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.43 E-value=2.2e-12 Score=123.28 Aligned_cols=167 Identities=14% Similarity=0.202 Sum_probs=115.8
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+|+|||||||+-||+.++++|++...+-.+|++..|+++.. +.++++. ....++.++.+|+++
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~---~~~~~~~--------------~~~~~~~~~~~Dvs~ 64 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQA---KELEDLA--------------KNHSNIHILEIDLRN 64 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSC---HHHHHHH--------------HHCTTEEEEECCTTC
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHH---HHHHHHH--------------hcCCcEEEEEEEecc
Confidence 58999999999999999999986322223899999987543 2232221 112578999999999
Q ss_pred CCCCCCHHHHHHHh---------cCccEEEEcCccCCC--------cccHHHHHHHHHHHHHHHHHHHHhc---------
Q psy7538 110 LKLGISEIDKKELI---------DNVDIVYHVAATIRF--------DEPIKTAVILNTRGTRDMLELSKQM--------- 163 (543)
Q Consensus 110 ~~lgls~~~~~~l~---------~~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~--------- 163 (543)
++ +++.++ ..+|++||+||.... .+.++..+++|+.|+..+.+.+...
T Consensus 65 ~~------~v~~~~~~i~~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~ 138 (248)
T d1snya_ 65 FD------AYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANE 138 (248)
T ss_dssp GG------GHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HH------HHHHHHhhhHHHhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccc
Confidence 87 343332 258999999996432 1235668999999998887776421
Q ss_pred -----cCCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHH
Q psy7538 164 -----KNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAE 238 (543)
Q Consensus 164 -----~~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~ 238 (543)
.+-.++|++||..+.....+ .| ....|+.||+....+.+.
T Consensus 139 ~~~~~~~~g~ii~i~S~~g~~~~~~-------~~----------------------------~~~~Y~aSKaal~~lt~~ 183 (248)
T d1snya_ 139 SQPMGVGRAAIINMSSILGSIQGNT-------DG----------------------------GMYAYRTSKSALNAATKS 183 (248)
T ss_dssp TSCSSTTTCEEEEECCGGGCSTTCC-------SC----------------------------CCHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccCCCC-------CC----------------------------ChHHHHHHHHHHHHHHHH
Confidence 12468899999765322110 00 014799999988888766
Q ss_pred Hhh----cCCcEEEEecCee
Q psy7538 239 CME----LGMPCMILRPSIV 254 (543)
Q Consensus 239 ~~~----~~lp~~IlRps~V 254 (543)
.+. .|+.+..+.||.|
T Consensus 184 la~e~~~~gI~vn~v~PG~v 203 (248)
T d1snya_ 184 LSVDLYPQRIMCVSLHPGWV 203 (248)
T ss_dssp HHHHHGGGTCEEEEECCCSB
T ss_pred HHHHhCCCCeEEEEcCCCcc
Confidence 543 6899999999876
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.43 E-value=3.1e-12 Score=122.32 Aligned_cols=170 Identities=14% Similarity=0.121 Sum_probs=114.5
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
|+.|+|+||||++-||.+++++|++.|..+ .|++..|+... ++++ + .....++.++.+|+
T Consensus 1 M~~KtilITGassGIG~a~a~~la~~G~~~-~Vi~~~R~~~~------~~~l---------~----~~~~~~~~~~~~Dv 60 (250)
T d1yo6a1 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIR-HIIATARDVEK------ATEL---------K----SIKDSRVHVLPLTV 60 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCC-EEEEEESSGGG------CHHH---------H----TCCCTTEEEEECCT
T ss_pred CcCCEEEEeCCCCHHHHHHHHHHHHCCCCC-EEEEEeCCHHH------HHHH---------H----HhhCCceEEEEEec
Confidence 456999999999999999999999998654 78888887532 2222 1 12335799999999
Q ss_pred CCCCCCCCHHHHHHHhc---------CccEEEEcCccCCC--------cccHHHHHHHHHHHHHHHHHHHHhc------c
Q psy7538 108 TQLKLGISEIDKKELID---------NVDIVYHVAATIRF--------DEPIKTAVILNTRGTRDMLELSKQM------K 164 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~---------~vd~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~------~ 164 (543)
++++ +++.+++ ++|++||+||.... .+.++..+++|+.|+..+.+.+... +
T Consensus 61 s~~~------~v~~~~~~i~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~ 134 (250)
T d1yo6a1 61 TCDK------SLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASK 134 (250)
T ss_dssp TCHH------HHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHS
T ss_pred CCHH------HHHHHHHHHHHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccC
Confidence 9875 4443321 38999999996421 1346678999999999887776421 0
Q ss_pred --------CCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHH
Q psy7538 165 --------NLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLV 236 (543)
Q Consensus 165 --------~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v 236 (543)
...+++.+|+..+...... ... ...| ...|+.||+....+.
T Consensus 135 ~~~~~~~~~~~~~i~~s~~~~~~~~~~-~~~-~~~~-----------------------------~~aY~aSKaal~~l~ 183 (250)
T d1yo6a1 135 ESGDQLSVSRAAVITISSGLGSITDNT-SGS-AQFP-----------------------------VLAYRMSKAAINMFG 183 (250)
T ss_dssp SCSSCCCTTTCEEEEECCGGGCSTTCC-STT-SSSC-----------------------------BHHHHHHHHHHHHHH
T ss_pred CCCccccceeccccccccccccccCCc-ccc-cchh-----------------------------HHHHHHHHHHHHHHH
Confidence 1235666666533221110 000 0000 046999999998888
Q ss_pred HHHhh----cCCcEEEEecCee
Q psy7538 237 AECME----LGMPCMILRPSIV 254 (543)
Q Consensus 237 ~~~~~----~~lp~~IlRps~V 254 (543)
+..+. .|+.+..+.||.|
T Consensus 184 ~~la~el~~~gI~v~~i~PG~v 205 (250)
T d1yo6a1 184 RTLAVDLKDDNVLVVNFCPGWV 205 (250)
T ss_dssp HHHHHHTGGGTCEEEEEECCCC
T ss_pred HHHHHHhcccCeEEEEEecCCC
Confidence 77654 5899999998865
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.42 E-value=7.1e-13 Score=128.66 Aligned_cols=233 Identities=14% Similarity=0.102 Sum_probs=145.9
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||++-||++++++|++.|. +|.+..|+. +++++.. +.+... .....++..+.+|+
T Consensus 2 L~gK~alITGas~GIG~aia~~la~~Ga---~V~~~~r~~------~~l~~~~-----~~i~~~--~~~~~~~~~~~~Dv 65 (274)
T d1xhla_ 2 FSGKSVIITGSSNGIGRSAAVIFAKEGA---QVTITGRNE------DRLEETK-----QQILKA--GVPAEKINAVVADV 65 (274)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH-----HHHHHT--TCCGGGEEEEECCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHH-----HHHHHc--CCCCcceEEEEeeC
Confidence 6899999999999999999999999986 888888864 3333221 112111 11234789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC---------cccHHHHHHHHHHHHHHHHHHHHhc---cCCce
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF---------DEPIKTAVILNTRGTRDMLELSKQM---KNLKC 168 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~---------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~ 168 (543)
++++ +++.+++ .+|+++|+||.... .+.++..+++|+.|+..+.+++... .+-.+
T Consensus 66 ~~~~------~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ 139 (274)
T d1xhla_ 66 TEAS------GQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEI 139 (274)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEE
T ss_pred CCHH------HHHHHHHHHHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhccccccccccccccccccccccc
Confidence 9976 5655543 58999999985421 1346678999999999888877542 23456
Q ss_pred EEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCC
Q psy7538 169 FTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGM 244 (543)
Q Consensus 169 ~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~l 244 (543)
++++||..+..... ....|+.+|+..+.+.+..+. +|+
T Consensus 140 ii~~ss~~~~~~~~--------------------------------------~~~~Y~asKaal~~ltk~lA~ela~~gI 181 (274)
T d1xhla_ 140 VNVSSIVAGPQAHS--------------------------------------GYPYYACAKAALDQYTRCTAIDLIQHGV 181 (274)
T ss_dssp EEECCGGGSSSCCT--------------------------------------TSHHHHHHHHHHHHHHHHHHHHHGGGTC
T ss_pred ccchhhhhccccCC--------------------------------------CCceehhhhhHHHHHHHHHHHHHhHhCC
Confidence 77777654422111 015799999999988876554 689
Q ss_pred cEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCc
Q psy7538 245 PCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKS 324 (543)
Q Consensus 245 p~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~ 324 (543)
.+..+.||.|-.+..+... .. .....-.......... .....-+...+|+|++++.++..... +-..|+
T Consensus 182 rVN~I~PG~i~T~~~~~~~---~~-~~~~~~~~~~~~~~~~-----~iPlgR~g~pediA~~v~fL~S~d~s--~~itG~ 250 (274)
T d1xhla_ 182 RVNSVSPGAVATGFMGAMG---LP-ETASDKLYSFIGSRKE-----CIPVGHCGKPEEIANIIVFLADRNLS--SYIIGQ 250 (274)
T ss_dssp EEEEEEECCBCSSHHHHTT---CC-HHHHHHHHHHHHHCTT-----TCTTSSCBCHHHHHHHHHHHHCHHHH--TTCCSC
T ss_pred ceeeeccCCCcCchhhhhc---cc-chhhHHHHHHHHHHHc-----CCCCCCCcCHHHHHHHHHHHcCCccc--cCccCc
Confidence 9999999988433111000 00 0000011111100000 00111244689999999877753211 013588
Q ss_pred EEEeecC
Q psy7538 325 VCNLTSN 331 (543)
Q Consensus 325 vyni~s~ 331 (543)
+..+.+|
T Consensus 251 ~i~vDGG 257 (274)
T d1xhla_ 251 SIVADGG 257 (274)
T ss_dssp EEEESTT
T ss_pred EEEeCcC
Confidence 9988877
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.41 E-value=1.7e-12 Score=125.81 Aligned_cols=230 Identities=13% Similarity=0.123 Sum_probs=145.0
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||++-||++++++|++.|. +|++..|+. +++++.. +.+.+. .....++..+.+|+
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~Ga---~V~l~~r~~------~~l~~~~-----~~l~~~--~~~~~~~~~~~~Dv 66 (272)
T d1xkqa_ 3 FSNKTVIITGSSNGIGRTTAILFAQEGA---NVTITGRSS------ERLEETR-----QIILKS--GVSEKQVNSVVADV 66 (272)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHH-----HHHHTT--TCCGGGEEEEECCT
T ss_pred CCCCEEEEeCcCcHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHH-----HHHHhc--CCCCCceEEEEccC
Confidence 6899999999999999999999999996 889999864 3333221 111111 11234789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------CccEEEEcCccCCC--------cc---cHHHHHHHHHHHHHHHHHHHHhc--cCCc
Q psy7538 108 TQLKLGISEIDKKELID-------NVDIVYHVAATIRF--------DE---PIKTAVILNTRGTRDMLELSKQM--KNLK 167 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~-------~vd~ViH~AA~v~~--------~~---~~~~~~~~Nv~gt~~ll~~a~~~--~~l~ 167 (543)
++++ +++.+++ ++|++||+||.... +. .++..+++|+.|+..+.+++... ++-.
T Consensus 67 s~~~------~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g 140 (272)
T d1xkqa_ 67 TTED------GQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKG 140 (272)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CCHH------HHHHHHHHHHHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCC
Confidence 9876 5655543 68999999987532 11 36678999999999988877542 1224
Q ss_pred eEEEEecC-ccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----c
Q psy7538 168 CFTYISTA-YCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----L 242 (543)
Q Consensus 168 ~~V~vST~-y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~ 242 (543)
.+|.++|. .+..... ....|+.||+..+.+.+..+. +
T Consensus 141 ~iI~~~Ss~a~~~~~~--------------------------------------~~~~Y~asKaal~~ltk~lA~el~~~ 182 (272)
T d1xkqa_ 141 EIVNVSSIVAGPQAQP--------------------------------------DFLYYAIAKAALDQYTRSTAIDLAKF 182 (272)
T ss_dssp EEEEECCGGGSSSCCC--------------------------------------SSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccccccchhccccCCC--------------------------------------CcchhhhHHHHHHHHHHHHHHHhccc
Confidence 56666664 3222111 015799999999888877654 6
Q ss_pred CCcEEEEecCeeeecCCCCCCCCCCCCCchHHH---HHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCC
Q psy7538 243 GMPCMILRPSIVVPIYKEPLPGWTDNINGPTGL---LIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKE 319 (543)
Q Consensus 243 ~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~---~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~ 319 (543)
|+.+..+.|+.|-.+..+. ...+... ......... ......-+...+|+|++++.++..... .
T Consensus 183 gIrVN~I~PG~i~T~~~~~-------~~~~~~~~~~~~~~~~~~~-----~~~PlgR~g~pediA~~v~fL~S~~as--~ 248 (272)
T d1xkqa_ 183 GIRVNSVSPGMVETGFTNA-------MGMPDQASQKFYNFMASHK-----ECIPIGAAGKPEHIANIILFLADRNLS--F 248 (272)
T ss_dssp TCEEEEEEECCBCSSHHHH-------TTCCHHHHHHHHHHHHHCT-----TTCTTSSCBCHHHHHHHHHHHHCHHHH--T
T ss_pred CeEEEEEeeCCCcchhhhc-------cCCchHHHHHHHHHHHHHh-----cCCCCCCCcCHHHHHHHHHHHhCcchh--C
Confidence 8999999999874332110 0111110 000000000 000111245678999998887753321 0
Q ss_pred CCCCcEEEeecC
Q psy7538 320 SERKSVCNLTSN 331 (543)
Q Consensus 320 ~~~~~vyni~s~ 331 (543)
-..|+++.+.+|
T Consensus 249 ~iTG~~i~vDGG 260 (272)
T d1xkqa_ 249 YILGQSIVADGG 260 (272)
T ss_dssp TCCSCEEEESTT
T ss_pred CccCeEEEeCcC
Confidence 125888888877
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.40 E-value=2.1e-12 Score=126.02 Aligned_cols=170 Identities=17% Similarity=0.172 Sum_probs=122.2
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
.|.|+||||++-||++++++|.+.|..+..|+...|.... .+++.+..+ . . .....++..+.+|+++
T Consensus 2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~---~~~l~~~~~--------~-~-~~~~~~~~~~~~Dv~~ 68 (285)
T d1jtva_ 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKT---QGRLWEAAR--------A-L-ACPPGSLETLQLDVRD 68 (285)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGG---THHHHHHHH--------H-T-TCCTTSEEEEECCTTC
T ss_pred CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhh---hHHHHHHHH--------H-H-hccCCceEEEeccccc
Confidence 3678999999999999999999999765556665665332 334433211 0 0 2234589999999999
Q ss_pred CCCCCCHHHHHHHhc-----CccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHh-c--cCCceEEEEec
Q psy7538 110 LKLGISEIDKKELID-----NVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQ-M--KNLKCFTYIST 174 (543)
Q Consensus 110 ~~lgls~~~~~~l~~-----~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--~~l~~~V~vST 174 (543)
++ +++.+++ .+|+++|+|+.... .+.++..+++|+.|+.++.+++.. | .+-.++|++||
T Consensus 69 ~~------~~~~~~~~~~~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS 142 (285)
T d1jtva_ 69 SK------SVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGS 142 (285)
T ss_dssp HH------HHHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEE
T ss_pred hH------hhhhhhhhccccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEec
Confidence 76 6666654 48999999987643 245677899999999988887643 1 24579999999
Q ss_pred CccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEEEe
Q psy7538 175 AYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMILR 250 (543)
Q Consensus 175 ~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~IlR 250 (543)
..+..... ....|+.||+..+.+.+..+. +|+.+..+.
T Consensus 143 ~~g~~~~~--------------------------------------~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~ 184 (285)
T d1jtva_ 143 VGGLMGLP--------------------------------------FNDVYCASKFALEGLCESLAVLLLPFGVHLSLIE 184 (285)
T ss_dssp GGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred hhhcCCCC--------------------------------------CchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEe
Confidence 86643211 115899999988888766554 689999999
Q ss_pred cCeeee
Q psy7538 251 PSIVVP 256 (543)
Q Consensus 251 ps~V~G 256 (543)
||.|-.
T Consensus 185 PG~v~T 190 (285)
T d1jtva_ 185 CGPVHT 190 (285)
T ss_dssp ECCBCC
T ss_pred cCCCCC
Confidence 998743
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.39 E-value=4.6e-12 Score=120.04 Aligned_cols=203 Identities=10% Similarity=0.064 Sum_probs=133.3
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
+||+|+||||+|-||++++++|++.|. +|.++.|.+... ......+..|..
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~G~---~V~~~~~~~~~~--------------------------~~~~~~~~~~~~ 51 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRARNW---WVASIDVVENEE--------------------------ASASVIVKMTDS 51 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTC---EEEEEESSCCTT--------------------------SSEEEECCCCSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCcccc--------------------------ccccceeecccC
Confidence 589999999999999999999999987 788887765321 112233334433
Q ss_pred CCCCCCCHH----HHHHHhc--CccEEEEcCccCC----C----cccHHHHHHHHHHHHHHHHHHHHh-ccCCceEEEEe
Q psy7538 109 QLKLGISEI----DKKELID--NVDIVYHVAATIR----F----DEPIKTAVILNTRGTRDMLELSKQ-MKNLKCFTYIS 173 (543)
Q Consensus 109 ~~~lgls~~----~~~~l~~--~vd~ViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~~a~~-~~~l~~~V~vS 173 (543)
+.+ +.+ ....... ++|++||+||... . .+.++..+++|+.++.++.+++.. +++-.++|++|
T Consensus 52 ~~~---~~~~~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~is 128 (236)
T d1dhra_ 52 FTE---QADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAG 128 (236)
T ss_dssp HHH---HHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cHH---HHHHHHHHHHHHhCCCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEc
Confidence 322 001 1112222 4899999998432 1 133556789999999999888865 33336899999
Q ss_pred cCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh------cCCcEE
Q psy7538 174 TAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME------LGMPCM 247 (543)
Q Consensus 174 T~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~------~~lp~~ 247 (543)
|..+...... ...|+.||+..+.+.+..+. .|+.+.
T Consensus 129 S~~~~~~~~~--------------------------------------~~~Y~asKaal~~lt~~la~El~~~~~gI~vn 170 (236)
T d1dhra_ 129 AKAALDGTPG--------------------------------------MIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAI 170 (236)
T ss_dssp CGGGGSCCTT--------------------------------------BHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEE
T ss_pred cHHHcCCccC--------------------------------------CcccHHHHHHHHHHHHHHHHHhccCCCcEEEE
Confidence 9866432110 15899999999999988764 268899
Q ss_pred EEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEE
Q psy7538 248 ILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCN 327 (543)
Q Consensus 248 IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyn 327 (543)
.+.|+.|-.+ +...... ......+++.+++++.+..++..... ...|.+..
T Consensus 171 ~v~PG~v~T~-----------------~~~~~~~---------~~~~~~~~~pe~va~~~~~l~s~~~~---~i~G~~i~ 221 (236)
T d1dhra_ 171 AVLPVTLDTP-----------------MNRKSMP---------EADFSSWTPLEFLVETFHDWITGNKR---PNSGSLIQ 221 (236)
T ss_dssp EEEESCEECH-----------------HHHHHST---------TSCGGGSEEHHHHHHHHHHHHTTTTC---CCTTCEEE
T ss_pred EEEeccCcCC-----------------cchhhCc---------cchhhcCCCHHHHHHHHHHHhCCCcc---CCCCCeEE
Confidence 9999877443 1111111 11223467899999998877755432 23566666
Q ss_pred eec
Q psy7538 328 LTS 330 (543)
Q Consensus 328 i~s 330 (543)
+.+
T Consensus 222 v~~ 224 (236)
T d1dhra_ 222 VVT 224 (236)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=99.39 E-value=7.4e-12 Score=122.59 Aligned_cols=226 Identities=15% Similarity=0.134 Sum_probs=145.5
Q ss_pred hhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 26 KTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 26 ~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
.-++||+++||||||-||++++++|++.|. +|++..|+.+ ++++. -+.+..+ ...++..+.+
T Consensus 21 ~~l~gK~alITGas~GIG~aiA~~la~~Ga---~Vii~~r~~~------~l~~~-----~~~l~~~----~g~~~~~~~~ 82 (294)
T d1w6ua_ 21 NSFQGKVAFITGGGTGLGKGMTTLLSSLGA---QCVIASRKMD------VLKAT-----AEQISSQ----TGNKVHAIQC 82 (294)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHH------HHHHH-----HHHHHHH----HSSCEEEEEC
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCC---EEEEEECCHH------HHHHH-----HHHHHHh----cCCceEEEEe
Confidence 358999999999999999999999999996 8999999742 22221 1112221 1346788999
Q ss_pred cCCCCCCCCCHHHHHHHh-------cCccEEEEcCccCCCc-------ccHHHHHHHHHHHHHHHHHHHH----hccCCc
Q psy7538 106 DITQLKLGISEIDKKELI-------DNVDIVYHVAATIRFD-------EPIKTAVILNTRGTRDMLELSK----QMKNLK 167 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~~-------~~~~~~~~~Nv~gt~~ll~~a~----~~~~l~ 167 (543)
|+++++ +++.++ .++|+++|+|+..... +.....+.+|..+...+...+. ....-.
T Consensus 83 D~~~~~------~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 156 (294)
T d1w6ua_ 83 DVRDPD------MVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGA 156 (294)
T ss_dssp CTTCHH------HHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred cccChH------HHHHHhhhhhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccc
Confidence 999875 444433 3689999999975432 2345567888888776655432 223445
Q ss_pred eEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cC
Q psy7538 168 CFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LG 243 (543)
Q Consensus 168 ~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~ 243 (543)
.++.+|+.++..... ....|+.+|+..+.+.+..+. +|
T Consensus 157 ~i~~~ss~~~~~~~~--------------------------------------~~~~YsasKaal~~ltk~lA~ela~~g 198 (294)
T d1w6ua_ 157 AFLSITTIYAETGSG--------------------------------------FVVPSASAKAGVEAMSKSLAAEWGKYG 198 (294)
T ss_dssp EEEEECCTHHHHCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred cccccccchhhhccc--------------------------------------ccchHHHHHHHHHHHHHHHHHHHhHhC
Confidence 677777765432211 115799999999999887654 68
Q ss_pred CcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCC
Q psy7538 244 MPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERK 323 (543)
Q Consensus 244 lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~ 323 (543)
+.+..+.||.|-.+..... .+ .............+ ..-+...+|+|+++..++..... -..|
T Consensus 199 IrVN~I~PG~i~T~~~~~~---~~---~~~~~~~~~~~~~p---------l~R~~~pediA~~v~fL~sd~s~---~itG 260 (294)
T d1w6ua_ 199 MRFNVIQPGPIKTKGAFSR---LD---PTGTFEKEMIGRIP---------CGRLGTVEELANLAAFLCSDYAS---WING 260 (294)
T ss_dssp EEEEEEEECCBCC---------CC---TTSHHHHHHHTTCT---------TSSCBCHHHHHHHHHHHTSGGGT---TCCS
T ss_pred eEEEEEccCccccchhhhc---cC---CcHHHHHHHhhcCC---------CCCCCCHHHHHHHHHHHhCchhc---CCCC
Confidence 9999999998855432110 00 01112222222111 11244579999999988865432 1358
Q ss_pred cEEEeecC
Q psy7538 324 SVCNLTSN 331 (543)
Q Consensus 324 ~vyni~s~ 331 (543)
++..+.+|
T Consensus 261 ~~i~vDGG 268 (294)
T d1w6ua_ 261 AVIKFDGG 268 (294)
T ss_dssp CEEEESTT
T ss_pred cEEEECCC
Confidence 88888876
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.39 E-value=2.4e-12 Score=123.85 Aligned_cols=169 Identities=15% Similarity=0.095 Sum_probs=123.2
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHh---hCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEE
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILR---LEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVI 103 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~---~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i 103 (543)
=++||.++|||||+-||+.++++|.+ .|. +|++..|+. ++++++. +.|..+. ...++.++
T Consensus 3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~---~Vv~~~r~~------~~l~~~~-----~~l~~~~---~~~~~~~~ 65 (259)
T d1oaaa_ 3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGS---VMLVSARSE------SMLRQLK-----EELGAQQ---PDLKVVLA 65 (259)
T ss_dssp CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTC---EEEEEESCH------HHHHHHH-----HHHHHHC---TTSEEEEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCC---EEEEEECCH------HHHHHHH-----HHHHhhc---CCceEEEE
Confidence 46899999999999999999999986 554 899999864 3443321 2222222 23478999
Q ss_pred EccCCCCCCCCCHHHHHHHhc-----------CccEEEEcCccCCC-------c---ccHHHHHHHHHHHHHHHHHHHHh
Q psy7538 104 SGDITQLKLGISEIDKKELID-----------NVDIVYHVAATIRF-------D---EPIKTAVILNTRGTRDMLELSKQ 162 (543)
Q Consensus 104 ~gDl~~~~lgls~~~~~~l~~-----------~vd~ViH~AA~v~~-------~---~~~~~~~~~Nv~gt~~ll~~a~~ 162 (543)
.+|+++++ +++++++ .+|+++|.||.... + +.++..+++|+.|+..+.+.+..
T Consensus 66 ~~Dvs~~~------~v~~l~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~ 139 (259)
T d1oaaa_ 66 AADLGTEA------GVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLN 139 (259)
T ss_dssp ECCTTSHH------HHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred EccCCCHH------HHHHHHHHHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHH
Confidence 99999875 6665542 36799999986421 1 34667899999999999998865
Q ss_pred c-cC----CceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHH
Q psy7538 163 M-KN----LKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVA 237 (543)
Q Consensus 163 ~-~~----l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~ 237 (543)
. .. -.++|++||..+..... ....|+.||+..+.+.+
T Consensus 140 ~m~~~~~~~g~Iv~isS~~~~~~~~--------------------------------------~~~~Y~asKaal~~lt~ 181 (259)
T d1oaaa_ 140 AFQDSPGLSKTVVNISSLCALQPYK--------------------------------------GWGLYCAGKAARDMLYQ 181 (259)
T ss_dssp TSCCCTTCEEEEEEECCGGGTSCCT--------------------------------------TCHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCcccccccccccccCCCc--------------------------------------cchHHHHHHHHHHHHHH
Confidence 3 11 24899999986643211 01689999999999988
Q ss_pred HHhh--cCCcEEEEecCeeee
Q psy7538 238 ECME--LGMPCMILRPSIVVP 256 (543)
Q Consensus 238 ~~~~--~~lp~~IlRps~V~G 256 (543)
..+. +|+.+..+.||.|-.
T Consensus 182 ~la~e~~gIrVn~v~PG~i~T 202 (259)
T d1oaaa_ 182 VLAAEEPSVRVLSYAPGPLDN 202 (259)
T ss_dssp HHHHHCTTEEEEEEECCSBSS
T ss_pred HHHhCCCCCEEEEEEcCCCCC
Confidence 7766 689999999987744
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.35 E-value=8.9e-12 Score=118.90 Aligned_cols=164 Identities=16% Similarity=0.193 Sum_probs=117.8
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++||||++-||++++++|.+.|. +|++..|+... .++-.++ ...+......|+
T Consensus 3 lkGKvalITGas~GIG~aia~~la~~G~---~V~~~~r~~~~--~~~~~~~-----------------l~~~~~~~~~~~ 60 (248)
T d2o23a1 3 VKGLVAVITGGASGLGLATAERLVGQGA---SAVLLDLPNSG--GEAQAKK-----------------LGNNCVFAPADV 60 (248)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECTTSS--HHHHHHH-----------------HCTTEEEEECCT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCChHH--HHHHHHH-----------------hCCCcccccccc
Confidence 5899999999999999999999999997 88999997643 1111111 123566777888
Q ss_pred CCCCCCCCHHHHHHH-------hcCccEEEEcCccCCC-------------cccHHHHHHHHHHHHHHHHHHHHhc----
Q psy7538 108 TQLKLGISEIDKKEL-------IDNVDIVYHVAATIRF-------------DEPIKTAVILNTRGTRDMLELSKQM---- 163 (543)
Q Consensus 108 ~~~~lgls~~~~~~l-------~~~vd~ViH~AA~v~~-------------~~~~~~~~~~Nv~gt~~ll~~a~~~---- 163 (543)
.+.+ +.+.. ....|.+++.++.... .+.++..+++|+.|+.++.+++...
T Consensus 61 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~ 134 (248)
T d2o23a1 61 TSEK------DVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQN 134 (248)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS
T ss_pred cccc------cccccccccccccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHh
Confidence 7754 22222 2357888887654321 2346678999999999999888542
Q ss_pred -----cCCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHH
Q psy7538 164 -----KNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAE 238 (543)
Q Consensus 164 -----~~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~ 238 (543)
.+-.++|++||.++..... ....|+.||+..+.+.+.
T Consensus 135 ~~~~~~~~G~Ii~isS~~~~~~~~--------------------------------------~~~~Y~asKaal~~lt~~ 176 (248)
T d2o23a1 135 EPDQGGQRGVIINTASVAAFEGQV--------------------------------------GQAAYSASKGGIVGMTLP 176 (248)
T ss_dssp CCCTTSCCEEEEEECCTHHHHCCT--------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred hhhccCCceEEEEecchhhccCCC--------------------------------------CchHHHHHHHHHHHHHHH
Confidence 1224799999997753211 015899999999999887
Q ss_pred Hhh----cCCcEEEEecCeeeec
Q psy7538 239 CME----LGMPCMILRPSIVVPI 257 (543)
Q Consensus 239 ~~~----~~lp~~IlRps~V~G~ 257 (543)
.+. +|+.+..+.||.|..+
T Consensus 177 la~e~~~~gIrvN~I~PG~i~T~ 199 (248)
T d2o23a1 177 IARDLAPIGIRVMTIAPGLFGTP 199 (248)
T ss_dssp HHHHHGGGTEEEEEEEECCBCCC
T ss_pred HHHHhcccCcceeeeccCceecc
Confidence 665 6899999999987544
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.34 E-value=2.9e-11 Score=114.36 Aligned_cols=207 Identities=11% Similarity=0.090 Sum_probs=131.3
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
..+|+||||+|-||++++++|++.|+ +|+++.|.+... ......+.+|...
T Consensus 2 ~gkVlITGas~GIG~aia~~l~~~G~---~V~~~~~~~~~~--------------------------~~~~~~~~~~~~~ 52 (235)
T d1ooea_ 2 SGKVIVYGGKGALGSAILEFFKKNGY---TVLNIDLSANDQ--------------------------ADSNILVDGNKNW 52 (235)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTE---EEEEEESSCCTT--------------------------SSEEEECCTTSCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCchhc--------------------------ccccceeccccCc
Confidence 45799999999999999999999987 899999986432 1233344555554
Q ss_pred CCCCCC-HHHHHHHh--cCccEEEEcCccCCC----c----ccHHHHHHHHHHHHHHHHHHHHhc-cCCceEEEEecCcc
Q psy7538 110 LKLGIS-EIDKKELI--DNVDIVYHVAATIRF----D----EPIKTAVILNTRGTRDMLELSKQM-KNLKCFTYISTAYC 177 (543)
Q Consensus 110 ~~lgls-~~~~~~l~--~~vd~ViH~AA~v~~----~----~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~vST~y~ 177 (543)
.+--.+ .+...... ..+|++||+||.... . +.++..+++|+.++..+.+++... ++=.++|++||..+
T Consensus 53 ~~~~~~~~~~~~~~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~ 132 (235)
T d1ooea_ 53 TEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAA 132 (235)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred hhHHHHHHHHHHHHhcCCCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHh
Confidence 320000 00111112 248999999985321 1 334557999999999988888653 22258999999865
Q ss_pred ccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh------cCCcEEEEec
Q psy7538 178 HPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME------LGMPCMILRP 251 (543)
Q Consensus 178 ~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~------~~lp~~IlRp 251 (543)
...... ...|+.||+..+.+.+..+. .++.+..+.|
T Consensus 133 ~~~~~~--------------------------------------~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~P 174 (235)
T d1ooea_ 133 MGPTPS--------------------------------------MIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMP 174 (235)
T ss_dssp GSCCTT--------------------------------------BHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEE
T ss_pred cCCccc--------------------------------------ccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEec
Confidence 432110 15899999999999988754 2456677777
Q ss_pred CeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecC
Q psy7538 252 SIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSN 331 (543)
Q Consensus 252 s~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~ 331 (543)
+.+-. .+......+ .....+++.+++++.++..+..... +...|....+.+.
T Consensus 175 g~~~T-----------------~~~~~~~~~---------~~~~~~~~~~~va~~~~~~l~~~~~--~~~tG~~i~v~~~ 226 (235)
T d1ooea_ 175 VTLDT-----------------PMNRKWMPN---------ADHSSWTPLSFISEHLLKWTTETSS--RPSSGALLKITTE 226 (235)
T ss_dssp SCBCC-----------------HHHHHHSTT---------CCGGGCBCHHHHHHHHHHHHHCGGG--CCCTTCEEEEEEE
T ss_pred CcCcC-----------------cchhhhCcC---------CccccCCCHHHHHHHHHHHhcCccc--cCCCceEEEEEee
Confidence 75522 122222211 1234578899999988765544332 1234666666543
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.33 E-value=1.5e-11 Score=117.71 Aligned_cols=215 Identities=12% Similarity=0.037 Sum_probs=139.2
Q ss_pred EEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCCC
Q psy7538 32 SIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQLK 111 (543)
Q Consensus 32 ~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~~ 111 (543)
+++||||++-||+.++++|.+.|. +|.+..|+.+.. +.++.. .. .++.+|+++++
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga---~V~i~~r~~~~~---~~~~~~---------~~----------~~~~~dv~~~~ 56 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGH---TVACHDESFKQK---DELEAF---------AE----------TYPQLKPMSEQ 56 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTC---EEEECCGGGGSH---HHHHHH---------HH----------HCTTSEECCCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHH---HHHHhh---------hC----------cEEEeccCCHH
Confidence 789999999999999999999997 788888875431 222221 00 12246777765
Q ss_pred CCCCHHHHHHHh-------cCccEEEEcCccCC----C----cccHHHHHHHHHHHHHHHHHHHHhc---cCCceEEEEe
Q psy7538 112 LGISEIDKKELI-------DNVDIVYHVAATIR----F----DEPIKTAVILNTRGTRDMLELSKQM---KNLKCFTYIS 173 (543)
Q Consensus 112 lgls~~~~~~l~-------~~vd~ViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~vS 173 (543)
+.++++ .++|++||+|+... + .+.++..+++|+.|+..+.+++... ++-.++|++|
T Consensus 57 ------~~~~~~~~~~~~~G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~is 130 (252)
T d1zmta1 57 ------EPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFIT 130 (252)
T ss_dssp ------SHHHHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred ------HHHHHHHHHHHHcCCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccc
Confidence 343333 36899999998542 1 1446678999999998888776431 2446899999
Q ss_pred cCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----cCCcEEEE
Q psy7538 174 TAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----LGMPCMIL 249 (543)
Q Consensus 174 T~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~~lp~~Il 249 (543)
|..+..... ....|+.||+..+.+.+..+. +|+.+..+
T Consensus 131 S~~~~~~~~--------------------------------------~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I 172 (252)
T d1zmta1 131 SATPFGPWK--------------------------------------ELSTYTSARAGACTLANALSKELGEYNIPVFAI 172 (252)
T ss_dssp CSTTTSCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEE
T ss_pred ccccccccc--------------------------------------cccccccccccHHHHHHHHHHHhcccCcEEEEE
Confidence 986643211 015899999999988877654 68999999
Q ss_pred ecCeeeecCCCCCCCCCCC---CCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEE
Q psy7538 250 RPSIVVPIYKEPLPGWTDN---INGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVC 326 (543)
Q Consensus 250 Rps~V~G~~~~p~~gw~d~---~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vy 326 (543)
.|+.|-.+.... +... ...+ .....+.+..+ ..-+...+|+|++++.++..... -..|++.
T Consensus 173 ~PG~i~T~~~~~---~~~~~~~~~~~-e~~~~~~~~~p---------l~R~g~pedvA~~v~fL~S~~s~---~iTG~~i 236 (252)
T d1zmta1 173 GPNYLHSEDSPY---FYPTEPWKTNP-EHVAHVKKVTA---------LQRLGTQKELGELVAFLASGSCD---YLTGQVF 236 (252)
T ss_dssp EESSBCCBTCCS---SCBHHHHTTCH-HHHHHHHHHSS---------SSSCBCHHHHHHHHHHHHTTSCG---GGTTCEE
T ss_pred ecCCCcCcchhh---hhhcccccCCH-HHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCchhc---CCcCCeE
Confidence 999886543221 1100 0011 12222222111 11245689999998888754332 1358888
Q ss_pred EeecC
Q psy7538 327 NLTSN 331 (543)
Q Consensus 327 ni~s~ 331 (543)
.+.+|
T Consensus 237 ~vdGG 241 (252)
T d1zmta1 237 WLAGG 241 (252)
T ss_dssp EESTT
T ss_pred EECCC
Confidence 88876
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=99.32 E-value=3.8e-11 Score=115.05 Aligned_cols=222 Identities=14% Similarity=0.092 Sum_probs=144.7
Q ss_pred hcCCCEEEEEcCcc--hhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEE
Q psy7538 27 TYENKSIFLSGGSG--FLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVIS 104 (543)
Q Consensus 27 ~~~~~~VlITGatG--FiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~ 104 (543)
+++||+||||||+| -||++++++|++.|. +|++..|+.+ ..++++++.. ...+...+.
T Consensus 2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~---~V~i~~~~~~---~~~~~~~~~~--------------~~~~~~~~~ 61 (258)
T d1qsga_ 2 FLSGKRILVTGVASKLSIAYGIAQAMHREGA---ELAFTYQNDK---LKGRVEEFAA--------------QLGSDIVLQ 61 (258)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTC---EEEEEESSTT---THHHHHHHHH--------------HTTCCCEEE
T ss_pred cCCCCEEEEECCCCchhHHHHHHHHHHHcCC---EEEEEeCCHH---HHHHHHHHHh--------------hcCCcceee
Confidence 68999999999998 688999999999997 7888888743 2344443321 123455677
Q ss_pred ccCCCCCCCCCHHHHHHHh-------cCccEEEEcCccCCCc------------ccHHHHHHHHHHHHHHHHHHHHhc-c
Q psy7538 105 GDITQLKLGISEIDKKELI-------DNVDIVYHVAATIRFD------------EPIKTAVILNTRGTRDMLELSKQM-K 164 (543)
Q Consensus 105 gDl~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~~------------~~~~~~~~~Nv~gt~~ll~~a~~~-~ 164 (543)
.|+.+.. +..... ...|+++|+|+..... +.+.....+|+.+...+.+.+... +
T Consensus 62 ~~~~~~~------~~~~~~~~~~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (258)
T d1qsga_ 62 CDVAEDA------SIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN 135 (258)
T ss_dssp CCTTCHH------HHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEE
T ss_pred cccchHH------HHHHHHHHhhhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 7877654 333332 2479999999865321 223446778888888888877654 2
Q ss_pred CCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh---
Q psy7538 165 NLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME--- 241 (543)
Q Consensus 165 ~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~--- 241 (543)
+-+.+|++||..+.... | ....|+.||+..+.+.+..+.
T Consensus 136 ~~~~Ii~iss~~~~~~~----------~----------------------------~~~~Y~~sKaal~~ltr~lA~el~ 177 (258)
T d1qsga_ 136 PGSALLTLSYLGAERAI----------P----------------------------NYNVMGLAKASLEANVRYMANAMG 177 (258)
T ss_dssp EEEEEEEEECGGGTSBC----------T----------------------------TTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCcEEEEecchhhccCC----------C----------------------------CcHHHHHHHHHHHHHHHHHHHHhC
Confidence 23468888887543211 0 016899999999999887665
Q ss_pred -cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCC
Q psy7538 242 -LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKES 320 (543)
Q Consensus 242 -~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~ 320 (543)
+|+.+..++|+.|-.+..+. ...............+ ..-+...+|+|+++..++.+... -
T Consensus 178 ~~gIrVN~I~PG~i~T~~~~~-------~~~~~~~~~~~~~~~p---------l~R~~~peeia~~v~fL~s~~s~---~ 238 (258)
T d1qsga_ 178 PEGVRVNAISAGPIRTLAASG-------IKDFRKMLAHCEAVTP---------IRRTVTIEDVGNSAAFLCSDLSA---G 238 (258)
T ss_dssp TTTEEEEEEEECCCCCTTGGG-------STTHHHHHHHHHHHST---------TSSCCCHHHHHHHHHHHTSGGGT---T
T ss_pred ccCceeecccccccccccccc-------cchhhhHHHHHHhCCC---------CCCCcCHHHHHHHHHHHhCchhc---C
Confidence 68999999999886543321 1111222222221110 11245689999999888855432 1
Q ss_pred CCCcEEEeecC
Q psy7538 321 ERKSVCNLTSN 331 (543)
Q Consensus 321 ~~~~vyni~s~ 331 (543)
..|.+..+.+|
T Consensus 239 itG~~i~vDGG 249 (258)
T d1qsga_ 239 ISGEVVHVDGG 249 (258)
T ss_dssp CCSCEEEESTT
T ss_pred ccCceEEECcC
Confidence 35888888776
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.30 E-value=2.5e-11 Score=117.22 Aligned_cols=199 Identities=10% Similarity=0.111 Sum_probs=133.6
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++||+++|||||+-||++++++|++.|. +|++..|+. ++++++.+ .+. ......+..+.+|+
T Consensus 12 L~GK~alITGassGIG~aiA~~la~~G~---~Vil~~r~~------~~l~~~~~-----~~~----~~~~~~~~~~~~d~ 73 (269)
T d1xu9a_ 12 LQGKKVIVTGASKGIGREMAYHLAKMGA---HVVVTARSK------ETLQKVVS-----HCL----ELGAASAHYIAGTM 73 (269)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHHH-----HHH----HHTCSEEEEEECCT
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHHH-----HHh----hhhcccchhhhhhh
Confidence 7899999999999999999999999996 899999963 45544321 111 12235677888888
Q ss_pred CCCCCCCCHHHHHHH-------hcCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc-c-CCceEEE
Q psy7538 108 TQLKLGISEIDKKEL-------IDNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM-K-NLKCFTY 171 (543)
Q Consensus 108 ~~~~lgls~~~~~~l-------~~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~-~l~~~V~ 171 (543)
++.. +...+ ...+|++++.|+.... .+.++..+++|+.|+..+.+.+..+ + +-.++|.
T Consensus 74 ~~~~------~~~~~~~~~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~ 147 (269)
T d1xu9a_ 74 EDMT------FAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVV 147 (269)
T ss_dssp TCHH------HHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred hhHH------HHHHHHHHHHHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceE
Confidence 8764 23222 3368999999986532 2345668999999988887776531 1 1258999
Q ss_pred EecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh------cCCc
Q psy7538 172 ISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME------LGMP 245 (543)
Q Consensus 172 vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~------~~lp 245 (543)
+||..+..... . -..|+.||+..+.+.+..+. .++.
T Consensus 148 isS~~~~~~~p----------~----------------------------~~~Y~asKaal~~~~~~La~El~~~~~~I~ 189 (269)
T d1xu9a_ 148 VSSLAGKVAYP----------M----------------------------VAAYSASKFALDGFFSSIRKEYSVSRVNVS 189 (269)
T ss_dssp EEEGGGTSCCT----------T----------------------------CHHHHHHHHHHHHHHHHHHHHHHHHTCCCE
T ss_pred eccchhcCCCC----------C----------------------------chHHHHHHHHHHHHHHHHHHHhhhcCCCEE
Confidence 99986543211 0 16999999998888776543 3577
Q ss_pred EEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhh
Q psy7538 246 CMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDF 314 (543)
Q Consensus 246 ~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~ 314 (543)
+..+.||.|-. .+......+. ......+.+++|+.++.+....
T Consensus 190 V~~v~PG~v~T-----------------~~~~~~~~~~---------~~~~~~~~e~~a~~i~~~~~~~ 232 (269)
T d1xu9a_ 190 ITLCVLGLIDT-----------------ETAMKAVSGI---------VHMQAAPKEECALEIIKGGALR 232 (269)
T ss_dssp EEEEEECCBCC-----------------HHHHHHSCGG---------GGGGCBCHHHHHHHHHHHHHTT
T ss_pred EEEEecCcCCC-----------------cHHHHhccCC---------ccccCCCHHHHHHHHHHHhhcC
Confidence 88899986622 1222222221 2234567889998888766443
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=99.23 E-value=3.1e-10 Score=109.53 Aligned_cols=223 Identities=10% Similarity=0.020 Sum_probs=136.5
Q ss_pred hcCCCEEEEEcCcc--hhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEE
Q psy7538 27 TYENKSIFLSGGSG--FLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVIS 104 (543)
Q Consensus 27 ~~~~~~VlITGatG--FiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~ 104 (543)
+++||++|||||+| -||.+++++|++.|. +|++..|+.+ .+++++++.+ ......++.
T Consensus 2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga---~V~i~~r~~~---~~~~~~~l~~--------------~~~~~~~~~ 61 (274)
T d2pd4a1 2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGA---TLAFTYLNES---LEKRVRPIAQ--------------ELNSPYVYE 61 (274)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTTTC---EEEEEESSTT---THHHHHHHHH--------------HTTCCCEEE
T ss_pred cCCCCEEEEECCCCCcHHHHHHHHHHHHCCC---EEEEEeCCHH---HHHHHHHHHh--------------hCCceeEee
Confidence 68999999999988 699999999999997 8889999743 3445544321 123455678
Q ss_pred ccCCCCCCCCCHHHHHHHh-------cCccEEEEcCccCCC--------cccHHHHH---HHHHHHHHHHHHHHHhccCC
Q psy7538 105 GDITQLKLGISEIDKKELI-------DNVDIVYHVAATIRF--------DEPIKTAV---ILNTRGTRDMLELSKQMKNL 166 (543)
Q Consensus 105 gDl~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~--------~~~~~~~~---~~Nv~gt~~ll~~a~~~~~l 166 (543)
.|++++. +.+.++ ..+|+++|+|+.... ........ .++..+...+.....+..+-
T Consensus 62 ~d~~~~~------~~~~~~~~~~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (274)
T d2pd4a1 62 LDVSKEE------HFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN 135 (274)
T ss_dssp CCTTCHH------HHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE
T ss_pred ecccchh------hHHHHHHHHHHHcCCCCeEEeecccccccccccccccccchhhhhhhcccccccccccccccccccc
Confidence 8998765 444443 368999999986532 11122222 22333444444444333233
Q ss_pred ceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh----c
Q psy7538 167 KCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME----L 242 (543)
Q Consensus 167 ~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~----~ 242 (543)
...|.++|..+..... .....|+.+|+..+.+.+..+. +
T Consensus 136 ~~~i~~~s~~~~~~~~-------------------------------------~~~~~y~asK~al~~ltr~lA~e~~~~ 178 (274)
T d2pd4a1 136 GASVLTLSYLGSTKYM-------------------------------------AHYNVMGLAKAALESAVRYLAVDLGKH 178 (274)
T ss_dssp EEEEEEEECGGGTSBC-------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred Ccceeeeccccccccc-------------------------------------ccchhhhHHHHHHHHHHHhhHHHhcCc
Confidence 4545555443322110 1126899999999998876554 6
Q ss_pred CCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCC
Q psy7538 243 GMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESER 322 (543)
Q Consensus 243 ~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~ 322 (543)
|+++..+.|+.+..+.... .............. ....-+...+|+|++++.++..... -..
T Consensus 179 GIrvN~I~PG~v~T~~~~~-------~~~~~~~~~~~~~~---------~p~~r~~~pedIA~~v~fL~S~~s~---~it 239 (274)
T d2pd4a1 179 HIRVNALSAGPIRTLASSG-------IADFRMILKWNEIN---------APLRKNVSLEEVGNAGMYLLSSLSS---GVS 239 (274)
T ss_dssp TCEEEEEEECCCCCTTGGG-------STTHHHHHHHHHHH---------STTSSCCCHHHHHHHHHHHHSGGGT---TCC
T ss_pred CceecccccCcccCccccc-------cCchHHHHHHHhhh---------hhccCCcCHHHHHHHHHHHhChhhC---CCc
Confidence 8999999999775543221 11111111111110 1123456799999998888765432 136
Q ss_pred CcEEEeecC
Q psy7538 323 KSVCNLTSN 331 (543)
Q Consensus 323 ~~vyni~s~ 331 (543)
|+++.+.+|
T Consensus 240 G~~i~vDGG 248 (274)
T d2pd4a1 240 GEVHFVDAG 248 (274)
T ss_dssp SCEEEESTT
T ss_pred CceEEECCC
Confidence 889988877
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=99.20 E-value=8.9e-11 Score=110.97 Aligned_cols=205 Identities=14% Similarity=0.120 Sum_probs=133.9
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+|+++||||++-||++++++|++.|. +|.+..|++.+ .+...+.+|+++
T Consensus 1 DK~alITGas~GIG~aiA~~la~~Ga---~V~i~~~~~~~----------------------------~~~~~~~~d~~~ 49 (241)
T d1uaya_ 1 ERSALVTGGASGLGRAAALALKARGY---RVVVLDLRREG----------------------------EDLIYVEGDVTR 49 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTC---EEEEEESSCCS----------------------------SSSEEEECCTTC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCccc----------------------------ccceEeeccccc
Confidence 58999999999999999999999997 88899987643 245567889887
Q ss_pred CCCCCCHHHHHHHh------cCccEEEEcCccCC-----------CcccHHHHHHHHHHHHHHHHHHHHhc---------
Q psy7538 110 LKLGISEIDKKELI------DNVDIVYHVAATIR-----------FDEPIKTAVILNTRGTRDMLELSKQM--------- 163 (543)
Q Consensus 110 ~~lgls~~~~~~l~------~~vd~ViH~AA~v~-----------~~~~~~~~~~~Nv~gt~~ll~~a~~~--------- 163 (543)
.. ....+. ...+.+++.++... ..+.++..+++|+.+...+...+...
T Consensus 50 ~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~ 123 (241)
T d1uaya_ 50 EE------DVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAE 123 (241)
T ss_dssp HH------HHHHHHHHHHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTT
T ss_pred hh------hhHHHHHhhhccccccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcc
Confidence 64 222222 23455555554321 01345667899999888887766432
Q ss_pred cCCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh--
Q psy7538 164 KNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME-- 241 (543)
Q Consensus 164 ~~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~-- 241 (543)
++-.++|++||..+..... ....|+.+|+..+.+.+..+.
T Consensus 124 ~~~G~Ii~isS~~~~~~~~--------------------------------------~~~~Y~asKaal~~lt~~lA~el 165 (241)
T d1uaya_ 124 GQRGVIVNTASVAAFEGQI--------------------------------------GQAAYAASKGGVVALTLPAAREL 165 (241)
T ss_dssp SCSEEEEEECCTHHHHCCT--------------------------------------TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCceeeeeecchhhccCCC--------------------------------------CchhhHHHHHHHHHHHHHHHHHH
Confidence 1235899999986643211 116899999999998877654
Q ss_pred --cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCC
Q psy7538 242 --LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKE 319 (543)
Q Consensus 242 --~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~ 319 (543)
+|+.+..+.|+.|-.+.... .. ............. . .-+.-.+|+|++++.++....
T Consensus 166 a~~gIrVN~V~PG~i~T~~~~~-------~~--~~~~~~~~~~~~~--~------~R~g~pedvA~~v~fL~s~~~---- 224 (241)
T d1uaya_ 166 AGWGIRVVTVAPGLFDTPLLQG-------LP--EKAKASLAAQVPF--P------PRLGRPEEYAALVLHILENPM---- 224 (241)
T ss_dssp GGGTEEEEEEEECSCSSHHHHT-------SC--HHHHHHHHTTCCS--S------CSCCCHHHHHHHHHHHHHCTT----
T ss_pred hhcCCceeeecCCcccccccch-------hh--hhHHHHHHhcCCC--C------CCCcCHHHHHHHHHHHHhCCC----
Confidence 68999999999874432211 01 1112222221110 0 113457899999888775432
Q ss_pred CCCCcEEEeecC
Q psy7538 320 SERKSVCNLTSN 331 (543)
Q Consensus 320 ~~~~~vyni~s~ 331 (543)
..|++..+.+|
T Consensus 225 -iTG~~i~VDGG 235 (241)
T d1uaya_ 225 -LNGEVVRLDGA 235 (241)
T ss_dssp -CCSCEEEESTT
T ss_pred -CCCCEEEECCc
Confidence 35888888766
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.19 E-value=1.4e-10 Score=112.10 Aligned_cols=124 Identities=18% Similarity=0.194 Sum_probs=90.3
Q ss_pred CCCEE-EEEcCcchhHHHHHHHHHhh-CCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 29 ENKSI-FLSGGSGFLGKVLIEKILRL-EPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 29 ~~~~V-lITGatGFiG~~Lv~~Ll~~-g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
.||+| +||||++-||..++++|++. |. +|++..|+. +++++. -+.|+.+ ..++.++.+|
T Consensus 1 ~g~rVAlVTGas~GIG~a~A~~la~~~g~---~Vi~~~r~~------~~~~~~-----~~~l~~~-----~~~~~~~~~D 61 (275)
T d1wmaa1 1 SGIHVALVTGGNKGIGLAIVRDLCRLFSG---DVVLTARDV------TRGQAA-----VQQLQAE-----GLSPRFHQLD 61 (275)
T ss_dssp CCCCEEEESSCSSHHHHHHHHHHHHHSSS---EEEEEESSH------HHHHHH-----HHHHHHT-----TCCCEEEECC
T ss_pred CCCeEEEECCCCCHHHHHHHHHHHHhCCC---EEEEEECCH------HHHHHH-----HHHHHhc-----CCcEEEEEEe
Confidence 36777 89999999999999999987 54 899999974 344332 1223322 2467899999
Q ss_pred CCCCCCCCCHHHHHHHh-------cCccEEEEcCccCCC-------cccHHHHHHHHHHHHHHHHHHHHhc-cCCceEEE
Q psy7538 107 ITQLKLGISEIDKKELI-------DNVDIVYHVAATIRF-------DEPIKTAVILNTRGTRDMLELSKQM-KNLKCFTY 171 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l~~~V~ 171 (543)
+++.+ ++++++ ..+|++||.||.... ++.++..+++|+.|+..+.+.+... +.-.++|.
T Consensus 62 vs~~~------sv~~~~~~~~~~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivn 135 (275)
T d1wmaa1 62 IDDLQ------SIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVN 135 (275)
T ss_dssp TTCHH------HHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEE
T ss_pred cCCHH------HHHHHHHHHHHhcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 99876 554443 368999999997532 2345568999999999999988652 22258999
Q ss_pred EecCcc
Q psy7538 172 ISTAYC 177 (543)
Q Consensus 172 vST~y~ 177 (543)
+||..+
T Consensus 136 isS~~~ 141 (275)
T d1wmaa1 136 VSSIMS 141 (275)
T ss_dssp ECCHHH
T ss_pred ccccce
Confidence 999744
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=99.14 E-value=2.2e-10 Score=110.08 Aligned_cols=230 Identities=12% Similarity=0.045 Sum_probs=136.5
Q ss_pred hcCCCEEEEEcCcc--hhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEE
Q psy7538 27 TYENKSIFLSGGSG--FLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVIS 104 (543)
Q Consensus 27 ~~~~~~VlITGatG--FiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~ 104 (543)
.++||+++||||+| -||.+++++|.+.|. +|++..|++.. ..+++. .....+...+.
T Consensus 3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga---~Vil~~~~~~~--~~~~~~----------------~~~~~~~~~~~ 61 (268)
T d2h7ma1 3 LLDGKRILVSGIITDSSIAFHIARVAQEQGA---QLVLTGFDRLR--LIQRIT----------------DRLPAKAPLLE 61 (268)
T ss_dssp TTTTCEEEECCCSSTTCHHHHHHHHHHHTTC---EEEEEECSCHH--HHHHHH----------------TTSSSCCCEEE
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHcCC---EEEEEeCChHH--HHHHHH----------------HHcCCceeeEe
Confidence 57999999999766 499999999999996 78888886521 112221 12234667889
Q ss_pred ccCCCCCCCCCHHHHHHH-------h---cCccEEEEcCccCCC---------c---ccHHHHHHHHHHHHHHHHHHHHh
Q psy7538 105 GDITQLKLGISEIDKKEL-------I---DNVDIVYHVAATIRF---------D---EPIKTAVILNTRGTRDMLELSKQ 162 (543)
Q Consensus 105 gDl~~~~lgls~~~~~~l-------~---~~vd~ViH~AA~v~~---------~---~~~~~~~~~Nv~gt~~ll~~a~~ 162 (543)
+|+++++ +...+ + ..+|+++|+|+.... + +.....+.+|+.+.......+..
T Consensus 62 ~dv~~~~------~~~~~~~~v~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (268)
T d2h7ma1 62 LDVQNEE------HLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLP 135 (268)
T ss_dssp CCTTCHH------HHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred eeccccc------ccccccchhhhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhh
Confidence 9999864 33322 2 247999999985421 1 12233566777777777666655
Q ss_pred ccCCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHHHhh-
Q psy7538 163 MKNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAECME- 241 (543)
Q Consensus 163 ~~~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~~~~- 241 (543)
..+-...+.++|....... +....|+.+|+..+.+.+..+.
T Consensus 136 ~~~~~~~i~~~s~~~~~~~--------------------------------------p~~~~y~~sK~a~~~ltr~lA~e 177 (268)
T d2h7ma1 136 IMNPGGSIVGMDFDPSRAM--------------------------------------PAYNWMTVAKSALESVNRFVARE 177 (268)
T ss_dssp GEEEEEEEEEEECCCSSCC--------------------------------------TTTHHHHHHHHHHHHHHHHHHHH
T ss_pred hcccccccccccccccccC--------------------------------------cccchhhccccchhhccccchhh
Confidence 4333344444444322211 1126899999999999887665
Q ss_pred ---cCCcEEEEecCeeeecCCCCCCCCCCCCCchHH--HHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcc
Q psy7538 242 ---LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTG--LLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLN 316 (543)
Q Consensus 242 ---~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~--~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~ 316 (543)
+|+.+..+.|+.|-.+..+.+.+ ...+... .......... ......+-+...+|+|+++..++.....
T Consensus 178 ~~~~gIrVN~V~PG~v~T~~~~~~~~---~~~~~~~~~~~~~~~~~~~----~~~pl~rr~~~p~dva~~v~fL~Sd~a~ 250 (268)
T d2h7ma1 178 AGKYGVRSNLVAAGPIRTLAMSAIVG---GALGEEAGAQIQLLEEGWD----QRAPIGWNMKDATPVAKTVCALLSDWLP 250 (268)
T ss_dssp HHTTTCEEEEEEECCCCCHHHHHHHT---TTTCHHHHHHHHHHHHHHH----HHCTTCCCTTCCHHHHHHHHHHHSSSCT
T ss_pred hhccCCcceEEecCCCCChhhhhhcc---chhhhhhccchHHHHHHHH----hcCCCCCCCCCHHHHHHHHHHHhCchhc
Confidence 68999999999875442211111 1111110 0011000000 0000112356689999998888754322
Q ss_pred cCCCCCCcEEEeecC
Q psy7538 317 SKESERKSVCNLTSN 331 (543)
Q Consensus 317 ~~~~~~~~vyni~s~ 331 (543)
-..|++..+.+|
T Consensus 251 ---~iTG~~i~vDGG 262 (268)
T d2h7ma1 251 ---ATTGDIIYADGG 262 (268)
T ss_dssp ---TCCSEEEEESTT
T ss_pred ---CccCCEEEECcC
Confidence 135788888776
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=98.98 E-value=1.9e-08 Score=97.06 Aligned_cols=223 Identities=12% Similarity=0.074 Sum_probs=134.5
Q ss_pred EEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCCC
Q psy7538 32 SIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQLK 111 (543)
Q Consensus 32 ~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~~ 111 (543)
.++||||++-||++++++|++.|. +|++..|.... ..+.+.+. +..+ .......+.+|.....
T Consensus 4 VAlITGas~GIG~aiA~~la~~Ga---~V~i~~~~~~~--~~~~~~~~--------l~~~----~~~~~~~~~~d~~~~~ 66 (284)
T d1e7wa_ 4 VALVTGAAKRLGRSIAEGLHAEGY---AVCLHYHRSAA--EANALSAT--------LNAR----RPNSAITVQADLSNVA 66 (284)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCHH--HHHHHHHH--------HHHH----STTCEEEEECCCSSSC
T ss_pred EEEEeCCCCHHHHHHHHHHHHcCC---EEEEEeCCCHH--HHHHHHHH--------HHhh----cCCceEEEEeeccccc
Confidence 579999999999999999999997 78777775421 11222211 1111 1234455555543321
Q ss_pred ----------CCCC-HHHHHHHh-------cCccEEEEcCccCCCc-------c--------------cHHHHHHHHHHH
Q psy7538 112 ----------LGIS-EIDKKELI-------DNVDIVYHVAATIRFD-------E--------------PIKTAVILNTRG 152 (543)
Q Consensus 112 ----------lgls-~~~~~~l~-------~~vd~ViH~AA~v~~~-------~--------------~~~~~~~~Nv~g 152 (543)
..++ ++++++++ .++|++||+||..... + .+...+.+|+.+
T Consensus 67 ~~~~~~~~~~~dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~ 146 (284)
T d1e7wa_ 67 TAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIA 146 (284)
T ss_dssp BCCCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHH
T ss_pred ccccccccccccCCCHHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheee
Confidence 1122 23555554 3689999999975321 0 122357889999
Q ss_pred HHHHHHHHHhc---------cCCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCc
Q psy7538 153 TRDMLELSKQM---------KNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPN 223 (543)
Q Consensus 153 t~~ll~~a~~~---------~~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn 223 (543)
+..+.+.+.+. .+-.++|.+|+........ ...
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~s~~~~~~~~--------------------------------------~~~ 188 (284)
T d1e7wa_ 147 PYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLL--------------------------------------GYT 188 (284)
T ss_dssp HHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSCCT--------------------------------------TCH
T ss_pred eeeeeccccchhhhhHHHhcCCCCcccccccccccCCcc--------------------------------------cee
Confidence 98888876542 1234677777775432211 015
Q ss_pred hHHHHHHHHHHHHHHHhh----cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccch
Q psy7538 224 SYAYTKCLAEGLVAECME----LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLP 299 (543)
Q Consensus 224 ~Y~~tK~~aE~~v~~~~~----~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~ 299 (543)
.|+.+|+..+.+.+..+. +|+.+..+.|+.+-.... .+...........+. ..-+..
T Consensus 189 ~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~-----------~~~~~~~~~~~~~pl--------~~R~~~ 249 (284)
T d1e7wa_ 189 IYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDD-----------MPPAVWEGHRSKVPL--------YQRDSS 249 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGG-----------SCHHHHHHHHTTCTT--------TTSCBC
T ss_pred eeccccccchhhhHHHHHHhCCcccccccccccccccccc-----------CCHHHHHHHHhcCCC--------CCCCCC
Confidence 899999999999887665 689999999985321111 112333333332210 012456
Q ss_pred HHHHHHHHHHHhhhhcccCCCCCCcEEEeecC
Q psy7538 300 ADVAINGVFLFTWDFLNSKESERKSVCNLTSN 331 (543)
Q Consensus 300 vddva~a~i~a~~~~~~~~~~~~~~vyni~s~ 331 (543)
.+|+|++++.++..... -..|++..+.+|
T Consensus 250 peeiA~~v~fL~S~~s~---~itG~~i~VDGG 278 (284)
T d1e7wa_ 250 AAEVSDVVIFLCSSKAK---YITGTCVKVDGG 278 (284)
T ss_dssp HHHHHHHHHHHHSGGGT---TCCSCEEEESTT
T ss_pred HHHHHHHHHHHhCchhc---CccCCeEEECcC
Confidence 89999999887754432 135888888776
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=98.91 E-value=9.9e-08 Score=90.80 Aligned_cols=221 Identities=10% Similarity=0.046 Sum_probs=131.9
Q ss_pred EEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCCC
Q psy7538 32 SIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQLK 111 (543)
Q Consensus 32 ~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~~ 111 (543)
+.+||||++-||+.++++|++.|. +|++..|+.... .+++.+ .+. .....+...+..|..+..
T Consensus 3 vAlVTGas~GIG~aia~~la~~G~---~Vvi~~r~~~~~--~~~~~~--------~~~----~~~~~~~~~~~~~~~~~~ 65 (266)
T d1mxha_ 3 AAVITGGARRIGHSIAVRLHQQGF---RVVVHYRHSEGA--AQRLVA--------ELN----AARAGSAVLCKGDLSLSS 65 (266)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCHHH--HHHHHH--------HHH----HHSTTCEEEEECCCSSST
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCchHH--HHHHHH--------HHH----hhcCCceEEEecccccch
Confidence 579999999999999999999997 889999875321 122211 111 122345666777766543
Q ss_pred CCCCHHHHHHHh-------cCccEEEEcCccCCCc------------------ccHHHHHHHHHHHHHHHHHHHHhcc--
Q psy7538 112 LGISEIDKKELI-------DNVDIVYHVAATIRFD------------------EPIKTAVILNTRGTRDMLELSKQMK-- 164 (543)
Q Consensus 112 lgls~~~~~~l~-------~~vd~ViH~AA~v~~~------------------~~~~~~~~~Nv~gt~~ll~~a~~~~-- 164 (543)
- .++.+..++ .++|+++|+||..... .........|..+.......+....
T Consensus 66 ~--~~~~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (266)
T d1mxha_ 66 S--LLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGE 143 (266)
T ss_dssp T--HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--
T ss_pred h--HHHHHHHHHHHHHHHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhcccccc
Confidence 1 122233332 3699999999965321 1122345566666665555554421
Q ss_pred ------CCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHHHH
Q psy7538 165 ------NLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLVAE 238 (543)
Q Consensus 165 ------~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v~~ 238 (543)
....++.+|+..+..... ....|+.||+..+.+.+.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------~~~~Y~asKaal~~lt~~ 185 (266)
T d1mxha_ 144 GGAWRSRNLSVVNLCDAMTDLPLP--------------------------------------GFCVYTMAKHALGGLTRA 185 (266)
T ss_dssp -----CCCEEEEEECCGGGGSCCT--------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccchhhhhccccccCc--------------------------------------chhhhhhhHHHHhhhHHH
Confidence 123444555543322111 116899999999998877
Q ss_pred Hhh----cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhh
Q psy7538 239 CME----LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDF 314 (543)
Q Consensus 239 ~~~----~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~ 314 (543)
.+. +|+.+..+.||.|..+.. .+......+.+..+. .+-+...+|+|++++.++...
T Consensus 186 lA~e~~~~gIrVN~I~PG~i~t~~~-----------~~~~~~~~~~~~~pl--------~r~~~~peeva~~v~fL~s~~ 246 (266)
T d1mxha_ 186 AALELAPRHIRVNAVAPGLSLLPPA-----------MPQETQEEYRRKVPL--------GQSEASAAQIADAIAFLVSKD 246 (266)
T ss_dssp HHHHHGGGTEEEEEEEESSBSCCSS-----------SCHHHHHHHHTTCTT--------TSCCBCHHHHHHHHHHHHSGG
T ss_pred HHHHhCccCcEEEEeccCcEecccc-----------CCHHHHHHHHhcCCC--------CCCCCCHHHHHHHHHHHhCch
Confidence 655 689999999998743321 122333333332210 012356889999998888654
Q ss_pred cccCCCCCCcEEEeecC
Q psy7538 315 LNSKESERKSVCNLTSN 331 (543)
Q Consensus 315 ~~~~~~~~~~vyni~s~ 331 (543)
.. -..|+++.+.+|
T Consensus 247 s~---~itG~~i~vDGG 260 (266)
T d1mxha_ 247 AG---YITGTTLKVDGG 260 (266)
T ss_dssp GT---TCCSCEEEESTT
T ss_pred hC---CccCCeEEECcc
Confidence 32 135888888776
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=98.86 E-value=4.5e-08 Score=94.96 Aligned_cols=243 Identities=9% Similarity=-0.020 Sum_probs=134.3
Q ss_pred cCCCEEEEEcCcc--hhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 28 YENKSIFLSGGSG--FLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 28 ~~~~~VlITGatG--FiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
++||+++||||+| -||+.++++|++.|. +|++..|++........++. ....-.++..+.......++..+..
T Consensus 6 L~gK~alVTGass~~GIG~aiA~~la~~Ga---~Vvi~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (297)
T d1d7oa_ 6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGA---EILVGTWVPALNIFETSLRR--GKFDQSRVLPDGSLMEIKKVYPLDA 80 (297)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHHTTC---EEEEEEEHHHHHHHHHHHHT--TTTTGGGBCTTSSBCCEEEEEEECT
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHCCC---EEEEEeCchhhhhhHHHHHH--hhhhhhhhhhhhhhhhhhhhhhhhh
Confidence 5899999999987 799999999999996 78888876421110000000 0000000000000000113333433
Q ss_pred cCCCCCCC------------CCHHHHHHH-------hcCccEEEEcCccCC-----C----cccHHHHHHHHHHHHHHHH
Q psy7538 106 DITQLKLG------------ISEIDKKEL-------IDNVDIVYHVAATIR-----F----DEPIKTAVILNTRGTRDML 157 (543)
Q Consensus 106 Dl~~~~lg------------ls~~~~~~l-------~~~vd~ViH~AA~v~-----~----~~~~~~~~~~Nv~gt~~ll 157 (543)
++.++..- .+..+.+.+ +.++|++||+||... + .+.+...+++|+.+...+.
T Consensus 81 ~~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~ 160 (297)
T d1d7oa_ 81 VFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLL 160 (297)
T ss_dssp TCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred hccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhh
Confidence 33222100 000011222 246899999998632 2 1335678999999999999
Q ss_pred HHHHhccC-CceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHHHHHH
Q psy7538 158 ELSKQMKN-LKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLAEGLV 236 (543)
Q Consensus 158 ~~a~~~~~-l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~aE~~v 236 (543)
+.+..... -...+.+|+........ ..+..|..+|+..+.+.
T Consensus 161 ~~~~~~~~~~g~~~~~~~~~~~~~~~-------------------------------------~~~~~y~~aKaa~~~l~ 203 (297)
T d1d7oa_ 161 SHFLPIMNPGGASISLTYIASERIIP-------------------------------------GYGGGMSSAKAALESDT 203 (297)
T ss_dssp HHHGGGEEEEEEEEEEECGGGTSCCT-------------------------------------TCTTTHHHHHHHHHHHH
T ss_pred hHHHHHhhcCCcceeeeehhhccccc-------------------------------------ccccceecccccccccc
Confidence 88765411 12345555543221110 11267999998888776
Q ss_pred HHHhh-----cCCcEEEEecCeeeecCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHh
Q psy7538 237 AECME-----LGMPCMILRPSIVVPIYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFT 311 (543)
Q Consensus 237 ~~~~~-----~~lp~~IlRps~V~G~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~ 311 (543)
+.... +++.+..+.|+.|-.+... .......+.....+..+ ..-+...+|++++++.++
T Consensus 204 ~~~a~e~~~~~gIrvN~I~PG~i~T~~~~-------~~~~~~~~~~~~~~~~P---------lgR~~~peevA~~v~fL~ 267 (297)
T d1d7oa_ 204 RVLAFEAGRKQNIRVNTISAGPLGSRAAK-------AIGFIDTMIEYSYNNAP---------IQKTLTADEVGNAAAFLV 267 (297)
T ss_dssp HHHHHHHHHHHCCEEEEEEECCCBCCCSS-------CCSHHHHHHHHHHHHSS---------SCCCBCHHHHHHHHHHHT
T ss_pred cccchhccccceEEecccccccccchhhh-------hccCCHHHHHHHHhCCC---------CCCCCCHHHHHHHHHHHh
Confidence 54322 5899999999988554332 11222233333322211 112456899999998887
Q ss_pred hhhcccCCCCCCcEEEeecC
Q psy7538 312 WDFLNSKESERKSVCNLTSN 331 (543)
Q Consensus 312 ~~~~~~~~~~~~~vyni~s~ 331 (543)
..... -..|++..+.+|
T Consensus 268 S~~a~---~itGq~i~vDGG 284 (297)
T d1d7oa_ 268 SPLAS---AITGATIYVDNG 284 (297)
T ss_dssp SGGGT---TCCSCEEEESTT
T ss_pred Cchhc---CCcCceEEECcC
Confidence 65432 135788888766
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=98.86 E-value=7.7e-08 Score=94.93 Aligned_cols=181 Identities=8% Similarity=0.036 Sum_probs=109.0
Q ss_pred CCCEEEEEc--CcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 29 ENKSIFLSG--GSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 29 ~~~~VlITG--atGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
++|..|||| ++.-||..++++|.+.|. +|.+..|+.... ...........=....... ............|
T Consensus 1 n~kVAlITGaa~s~GIG~aiA~~la~~GA---~V~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 73 (329)
T d1uh5a_ 1 NEDICFIAGIGDTNGYGWGIAKELSKRNV---KIIFGIWPPVYN---IFMKNYKNGKFDNDMIIDK-DKKMNILDMLPFD 73 (329)
T ss_dssp CCCEEEEECCSSSSSHHHHHHHHHHHTTC---EEEEEECGGGHH---HHHHHHHTTTTTGGGEETT-TEECCEEEEEECC
T ss_pred CCcEEEEeCCCCCChHHHHHHHHHHHcCC---EEEEEeCchhhh---hhhHHHHHHhhhhHHHHHH-Hhhhhhhhccccc
Confidence 478999999 556899999999999996 777777654321 1111111000000000000 0111222333333
Q ss_pred C--------------------CCCCCCCCHHHH----HHHhcCccEEEEcCccCC-----C----cccHHHHHHHHHHHH
Q psy7538 107 I--------------------TQLKLGISEIDK----KELIDNVDIVYHVAATIR-----F----DEPIKTAVILNTRGT 153 (543)
Q Consensus 107 l--------------------~~~~lgls~~~~----~~l~~~vd~ViH~AA~v~-----~----~~~~~~~~~~Nv~gt 153 (543)
. ++.+ +.+.+ .+...++|+++|+||... + .+.+...+++|+.|+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~ 150 (329)
T d1uh5a_ 74 ASFDTANDIDEETKNNKRYNMLQNY---TIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSL 150 (329)
T ss_dssp TTCSSGGGCCHHHHTSHHHHTCCCC---SHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHH
T ss_pred ceehhhcccchhhhhhhhhhhhhHH---HHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHH
Confidence 3 3332 11111 222347999999998542 2 244667899999999
Q ss_pred HHHHHHHHhc-cCCceEEEEecCccccCCCcccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCCCchHHHHHHHH
Q psy7538 154 RDMLELSKQM-KNLKCFTYISTAYCHPSEKVLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEFPNSYAYTKCLA 232 (543)
Q Consensus 154 ~~ll~~a~~~-~~l~~~V~vST~y~~~~~~~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pn~Y~~tK~~a 232 (543)
..+.+.+... +.-.++|.+||..+.... | .+...|+.+|+..
T Consensus 151 ~~~~k~~~~~m~~~GsIv~iss~~~~~~~--------p-----------------------------~y~~~y~asKaal 193 (329)
T d1uh5a_ 151 ISLCKYFVNIMKPQSSIISLTYHASQKVV--------P-----------------------------GYGGGMSSAKAAL 193 (329)
T ss_dssp HHHHHHHGGGEEEEEEEEEEECGGGTSCC--------T-----------------------------TCTTTHHHHHHHH
T ss_pred HHHHHHHHhhcccccccccceeehhcccc--------c-----------------------------ccchhhhhhhccc
Confidence 9988887653 333588888887553221 0 0115799999999
Q ss_pred HHHHHHHhh-----cCCcEEEEecCeeee
Q psy7538 233 EGLVAECME-----LGMPCMILRPSIVVP 256 (543)
Q Consensus 233 E~~v~~~~~-----~~lp~~IlRps~V~G 256 (543)
|.+.+..+. +|+++..+.||.|--
T Consensus 194 ~~ltr~lA~Ela~~~gIRVNaI~PG~i~T 222 (329)
T d1uh5a_ 194 ESDTRVLAYHLGRNYNIRINTISAGPLKS 222 (329)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEEEECCCCC
T ss_pred cccchhhHHHHhcccCcEEEEEecCcccc
Confidence 988876543 489999999998744
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=98.80 E-value=2.9e-07 Score=87.05 Aligned_cols=234 Identities=12% Similarity=-0.009 Sum_probs=125.8
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+|.|+||||+|-||++++++|++.|. +|++..|++.. ...|+.+
T Consensus 1 mkVvlITGas~GIG~aiA~~la~~Ga---~V~~~~~~~~~---------------------------------~~~d~~~ 44 (257)
T d1fjha_ 1 MSIIVISGCATGIGAATRKVLEAAGH---QIVGIDIRDAE---------------------------------VIADLST 44 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSSSS---------------------------------EECCTTS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECChHH---------------------------------HHHHhcC
Confidence 47899999999999999999999997 78888886531 1234443
Q ss_pred CCCCCCHHHHHHH----hcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhc---cCCceEEEEecCccccCCC
Q psy7538 110 LKLGISEIDKKEL----IDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQM---KNLKCFTYISTAYCHPSEK 182 (543)
Q Consensus 110 ~~lgls~~~~~~l----~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l~~~V~vST~y~~~~~~ 182 (543)
..- . ....... ...+|+++|+|+.....+.+.....+|..+...+.+..... ........+++........
T Consensus 45 ~~~-~-~~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (257)
T d1fjha_ 45 AEG-R-KQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAF 122 (257)
T ss_dssp HHH-H-HHHHHHHHTTCTTCCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCG
T ss_pred HHH-H-HHHHHHHHHHhCCCCcEEEEcCCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhh
Confidence 220 0 0001111 13589999999987767777888889988887776654332 1344555555542221110
Q ss_pred cccccccCCCCChHHHHHHHhhcchhhhhhhhhhccCCC--CchHHHHHHHHHHHHHHHhh----cCCcEEEEecCeeee
Q psy7538 183 VLEERTYLPPDDPHQVILRAESMKEEDLEVFRQDILGEF--PNSYAYTKCLAEGLVAECME----LGMPCMILRPSIVVP 256 (543)
Q Consensus 183 ~i~E~~y~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~--pn~Y~~tK~~aE~~v~~~~~----~~lp~~IlRps~V~G 256 (543)
.. . +.. .....-..-.+.... ...+.. ...|+.||+..+.+.+..+. +|+.+..+.|+.|-.
T Consensus 123 ~~----~--~~~-----~~~~~g~~~~i~s~~-~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T 190 (257)
T d1fjha_ 123 DK----N--PLA-----LALEAGEEAKARAIV-EHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATET 190 (257)
T ss_dssp GG----C--TTH-----HHHHHTCHHHHHHHH-HTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---
T ss_pred hh----h--hhh-----hhccCCcEEEEeeeh-hccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCC
Confidence 00 0 000 000000000000000 000111 13699999999999887654 689999999998744
Q ss_pred cCCCCCCCCCCCCCchHHHHHHHhcCceeEEeecCCcccccchHHHHHHHHHHHhhhhcccCCCCCCcEEEeecC
Q psy7538 257 IYKEPLPGWTDNINGPTGLLIGAGKGVIRSMYCKNTGMADFLPADVAINGVFLFTWDFLNSKESERKSVCNLTSN 331 (543)
Q Consensus 257 ~~~~p~~gw~d~~~g~~~~~~~~~~g~~~~~~~~~~~~~d~V~vddva~a~i~a~~~~~~~~~~~~~~vyni~s~ 331 (543)
+..+. ............+. ....--+...+|+++++..++..... -..|++..+.+|
T Consensus 191 ~~~~~-------~~~~~~~~~~~~~~--------~~PlgR~g~p~eva~~v~fL~S~~s~---~itG~~i~vDGG 247 (257)
T d1fjha_ 191 PLLQA-------GLQDPRYGESIAKF--------VPPMGRRAEPSEMASVIAFLMSPAAS---YVHGAQIVIDGG 247 (257)
T ss_dssp -------------------------C--------CCSTTSCCCTHHHHHHHHHHTSGGGT---TCCSCEEEESTT
T ss_pred hhHHh-------hcCCHHHHHHHHhc--------CCCCCCCcCHHHHHHHHHHHhCchhC---CccCceEEeCCC
Confidence 32110 00000011111110 01111245679999999888755432 135788888765
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=98.67 E-value=2.2e-08 Score=90.91 Aligned_cols=84 Identities=14% Similarity=0.204 Sum_probs=65.0
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
-++||+|+||||+|.||+.+++.|++.|. +|.+..|+. ++++++. +.+... .++....+|
T Consensus 20 ~l~gK~vlItGasgGIG~~ia~~la~~G~---~V~~~~r~~------~~~~~~~-----~~~~~~------~~~~~~~~d 79 (191)
T d1luaa1 20 SVKGKKAVVLAGTGPVGMRSAALLAGEGA---EVVLCGRKL------DKAQAAA-----DSVNKR------FKVNVTAAE 79 (191)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSH------HHHHHHH-----HHHHHH------HTCCCEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHhhcc---chhhcccch------HHHHHHH-----HHHHhc------cchhhhhhh
Confidence 46899999999999999999999999986 889999974 4443332 122221 134567789
Q ss_pred CCCCCCCCCHHHHHHHhcCccEEEEcCccC
Q psy7538 107 ITQLKLGISEIDKKELIDNVDIVYHVAATI 136 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~~vd~ViH~AA~v 136 (543)
+++++ ++++++.++|+|||+|+..
T Consensus 80 ~~~~~------~~~~~~~~iDilin~Ag~g 103 (191)
T d1luaa1 80 TADDA------SRAEAVKGAHFVFTAGAIG 103 (191)
T ss_dssp CCSHH------HHHHHTTTCSEEEECCCTT
T ss_pred cccHH------HHHHHhcCcCeeeecCccc
Confidence 98765 8899999999999999853
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.72 E-value=0.00033 Score=59.38 Aligned_cols=115 Identities=13% Similarity=0.051 Sum_probs=79.1
Q ss_pred EEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCCC
Q psy7538 32 SIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQLK 111 (543)
Q Consensus 32 ~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~~ 111 (543)
+|.|+||+|.+|++++-.|..++ -+.++.+++..+. .....++.. .........+ +. .
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~-~~~elvLiDi~~~----~~~a~Dl~~------------~~~~~~~~~~---~~-~- 59 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSP-LVSRLTLYDIAHT----PGVAADLSH------------IETRATVKGY---LG-P- 59 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCT-TCSEEEEEESSSH----HHHHHHHTT------------SSSSCEEEEE---ES-G-
T ss_pred eEEEECCCChHHHHHHHHHHhCC-ccceEEEEecccc----chhhHHHhh------------hhhhcCCCeE---Ec-C-
Confidence 79999999999999998887774 4678988887541 111122211 1111122211 11 1
Q ss_pred CCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEec
Q psy7538 112 LGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIST 174 (543)
Q Consensus 112 lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 174 (543)
.+..+.++++|+|+-+|+..+- .++..+.++.|+...+.+++.+++. +.+.++.+-|
T Consensus 60 -----~~~~~~~~~aDivVitag~~~~~g~sR~~ll~~N~~i~~~i~~~i~~~-~p~~iiivvt 117 (144)
T d1mlda1 60 -----EQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQH-CPDAMICIIS 117 (144)
T ss_dssp -----GGHHHHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTSEEEECS
T ss_pred -----CChHHHhCCCCEEEECCCcCCCCCCCcchHHHHHHHHHHHHHHHHHhc-CCCeEEEEec
Confidence 1466777999999999997543 3455667899999999999999998 7777777766
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.62 E-value=0.00022 Score=60.56 Aligned_cols=115 Identities=16% Similarity=0.112 Sum_probs=74.4
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|.|+||+|.+|++++-.|....+.+.++.+++..+. .+....++.+. ........+.+ .
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~---~~g~a~Dl~h~------------~~~~~~~~~~~----~ 61 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPV---TPGVAVDLSHI------------PTAVKIKGFSG----E 61 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTT---HHHHHHHHHTS------------CSSCEEEEECS----S
T ss_pred CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEeccccc---chhHHHHHHCC------------ccccCCcEEEc----C
Confidence 68999999999999999877655345568888876432 22211233211 11122223221 1
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCC-CcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEE
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIR-FDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYI 172 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~v 172 (543)
+ +.+ .++++|+|+-+|+..+ ..++..+..+.|..-.+.+.+.+.+. ..+.+|.+
T Consensus 62 ~------~~~-~~~~aDvvvitaG~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~-~p~aiviv 116 (145)
T d2cmda1 62 D------ATP-ALEGADVVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKT-CPKACIGI 116 (145)
T ss_dssp C------CHH-HHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTSEEEE
T ss_pred C------Ccc-ccCCCCEEEECCCccCCCCcchhhHHHHHHHHHHHHHHHHHhh-CCCcEEEE
Confidence 1 243 4689999999999764 34455678899999999999999887 45554433
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.53 E-value=0.00041 Score=58.81 Aligned_cols=120 Identities=13% Similarity=0.099 Sum_probs=74.8
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|.|.||+|.+|+.++..|+.++ -+.++.++++.+.-..++.--.++.+. . .....++....+--.
T Consensus 1 MKV~IiGA~G~VG~~~a~~l~~~~-l~~el~L~D~~~~~~~~~g~a~Dl~~~---------~-~~~~~~~~~~~~~~~-- 67 (145)
T d1hyea1 1 MKVTIIGASGRVGSATALLLAKEP-FMKDLVLIGREHSINKLEGLREDIYDA---------L-AGTRSDANIYVESDE-- 67 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCT-TCCEEEEEECGGGHHHHHHHHHHHHHH---------H-TTSCCCCEEEEEETT--
T ss_pred CEEEEECCCChHHHHHHHHHHhCC-cccccccccchhhhHhhhcccccchhc---------c-cccccCCccccCCcc--
Confidence 689999999999999999888875 456888888864211111101111110 0 111223332211111
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEE
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYI 172 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~v 172 (543)
+. ..++++|+|+-+||..+- .++..+.++.|..-.+.+.+...+. +.+.++.+
T Consensus 68 -------d~-~~l~~aDvVVitAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~~~-~~~~iivV 121 (145)
T d1hyea1 68 -------NL-RIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEI-CDTKIFVI 121 (145)
T ss_dssp -------CG-GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CCCEEEEC
T ss_pred -------hH-HHhccceEEEEecccccCCCCChhhhhhhhHHHHHHHHHHHhcc-CCCeEEEE
Confidence 12 245799999999997654 4566678999999999999998887 44554433
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=97.31 E-value=0.00094 Score=56.56 Aligned_cols=117 Identities=12% Similarity=0.129 Sum_probs=73.8
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
+.|+|.|.|+ |.+|..++..|+.++ -+.+|+++++..+.. +....++.+.. . .........+|..
T Consensus 4 ~~~KI~IIGa-G~VG~~~A~~l~~~~-~~~elvL~D~~~~~~--~g~a~Dl~~a~----------~-~~~~~~~~~~d~~ 68 (146)
T d1ez4a1 4 NHQKVVLVGD-GAVGSSYAFAMAQQG-IAEEFVIVDVVKDRT--KGDALDLEDAQ----------A-FTAPKKIYSGEYS 68 (146)
T ss_dssp TBCEEEEECC-SHHHHHHHHHHHHHT-CCSEEEEECSSHHHH--HHHHHHHHGGG----------G-GSCCCEEEECCGG
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcC-CCcEEEEeecccchh--HHHHHHHhccc----------c-ccCCceEeeccHH
Confidence 4679999995 999999999999986 345899998864211 11111221111 1 1122344555532
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEec
Q psy7538 109 QLKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIST 174 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 174 (543)
.++++|+|+.+|+..+- .+...+....|+.-.+.+.+...+. +.+.++.+-|
T Consensus 69 -------------~~~~adivvitag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~-~p~aivivvt 121 (146)
T d1ez4a1 69 -------------DCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDS-GFDGIFLVAA 121 (146)
T ss_dssp -------------GGTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHT-TCCSEEEECS
T ss_pred -------------HhccccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhhc-CCCcEEEEeC
Confidence 24789999999987543 3445567889999999999999887 6777776655
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=97.30 E-value=0.0012 Score=55.57 Aligned_cols=116 Identities=12% Similarity=0.048 Sum_probs=75.8
Q ss_pred EEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCCC
Q psy7538 32 SIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQLK 111 (543)
Q Consensus 32 ~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~~ 111 (543)
+|.|+||+|.+|+.++-.|+.++ -+.++.+++...+....+.-..++.+. -....+.....+|..
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~-l~~el~L~Di~~~~~~~~g~a~Dl~~~-----------~~~~~~~~i~~~~~~--- 66 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALRD-IADEVVFVDIPDKEDDTVGQAADTNHG-----------IAYDSNTRVRQGGYE--- 66 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-CCSEEEEECCGGGHHHHHHHHHHHHHH-----------HTTTCCCEEEECCGG---
T ss_pred eEEEECCCCcHHHHHHHHHHhCC-CCCEEEEEecCCcccccceeecchhhc-----------ccccCCceEeeCCHH---
Confidence 79999999999999999999885 456888887643211111111121110 011234444455432
Q ss_pred CCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEe
Q psy7538 112 LGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIS 173 (543)
Q Consensus 112 lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vS 173 (543)
.+.++|+|+-+|+..+- .++..+.++.|..-.+.+.+..++. +.+.++.+=
T Consensus 67 ----------~~~~aDiVvitaG~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~-~p~~i~ivv 118 (142)
T d1o6za1 67 ----------DTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH-NDDYISLTT 118 (142)
T ss_dssp ----------GGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTT-CSCCEEEEC
T ss_pred ----------HhhhcCEEEEecccccccCCchhhHHHHHHHHHHHHHHHHHhc-CCCceEEEe
Confidence 13699999999986653 3556778999999999999999987 555554443
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=97.25 E-value=0.0021 Score=56.03 Aligned_cols=116 Identities=19% Similarity=0.165 Sum_probs=71.8
Q ss_pred hhhcCCCEEEEEcCcchhHHHHHHHHHhhC---CC-cCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCce
Q psy7538 25 AKTYENKSIFLSGGSGFLGKVLIEKILRLE---PN-VKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKI 100 (543)
Q Consensus 25 ~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g---~~-v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v 100 (543)
....+..+|.||||+|.||.+++-.|.+.. .+ .-.++++..++.. +.++.+ ..+ + + .......
T Consensus 19 ~~~k~~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~----~~l~g~----~md-l---~-d~a~~~~ 85 (175)
T d7mdha1 19 KSWKKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSF----QALEGV----AME-L---E-DSLYPLL 85 (175)
T ss_dssp --CCCCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGH----HHHHHH----HHH-H---H-TTTCTTE
T ss_pred hccCCCcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCcccc----chhcch----hhh-h---c-ccccccc
Confidence 344456689999999999999999887642 11 1256666665421 122110 000 0 0 1111122
Q ss_pred EEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCC-CcccHHHHHHHHHHHHHHHHHHHHhc
Q psy7538 101 QVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIR-FDEPIKTAVILNTRGTRDMLELSKQM 163 (543)
Q Consensus 101 ~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~~a~~~ 163 (543)
..+.. +. +....++++|+||-+|+..+ ..+...+.++.|..-.+.+.+.+.+.
T Consensus 86 ~~~~~--~~--------~~~~~~~~aDvVvi~ag~~rkpg~tR~Dll~~N~~I~k~~~~~i~~~ 139 (175)
T d7mdha1 86 REVSI--GI--------DPYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAV 139 (175)
T ss_dssp EEEEE--ES--------CHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCccc--cc--------cchhhccCCceEEEeeccCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 21111 11 24566789999999998765 35677889999999999999999885
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.20 E-value=0.00067 Score=57.44 Aligned_cols=39 Identities=13% Similarity=0.281 Sum_probs=31.4
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhC-CCcCEEEEEecCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLE-PNVKKIYLLMRTKK 68 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g-~~v~~V~~l~R~~~ 68 (543)
+|+|.|.||||++|+.+++.|++.. +.+.+++++.+++.
T Consensus 1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s 40 (146)
T d1t4ba1 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQL 40 (146)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSST
T ss_pred CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccc
Confidence 4689999999999999999998752 34568888877654
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.10 E-value=0.00052 Score=57.05 Aligned_cols=71 Identities=24% Similarity=0.316 Sum_probs=52.2
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|+|.|+ |.+|+.+++.|.+.|+ .|.++.+.+ ++++++ ..+ -++.++.||.+++
T Consensus 1 M~IvI~G~-G~~G~~la~~L~~~g~---~v~vid~d~------~~~~~~---------~~~------~~~~vi~Gd~~~~ 55 (132)
T d1lssa_ 1 MYIIIAGI-GRVGYTLAKSLSEKGH---DIVLIDIDK------DICKKA---------SAE------IDALVINGDCTKI 55 (132)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHH---------HHH------CSSEEEESCTTSH
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCC---CcceecCCh------hhhhhh---------hhh------hhhhhccCcccch
Confidence 78999997 9999999999999987 677887753 333322 111 1467899999987
Q ss_pred CCCCCHHHHHHH-hcCccEEEEc
Q psy7538 111 KLGISEIDKKEL-IDNVDIVYHV 132 (543)
Q Consensus 111 ~lgls~~~~~~l-~~~vd~ViH~ 132 (543)
+ -++++ ++++|.++-+
T Consensus 56 ~------~l~~~~i~~a~~vv~~ 72 (132)
T d1lssa_ 56 K------TLEDAGIEDADMYIAV 72 (132)
T ss_dssp H------HHHHTTTTTCSEEEEC
T ss_pred h------hhhhcChhhhhhhccc
Confidence 6 46555 5678988854
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=97.05 E-value=0.0013 Score=56.97 Aligned_cols=75 Identities=20% Similarity=0.263 Sum_probs=52.0
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
++|+|+|.|| |++|+.+++.|.+.|+ +|++..|+. ++.+++. ...........+..
T Consensus 1 ~~K~IliiGa-G~~G~~~a~~L~~~g~---~V~v~dr~~------~~a~~l~--------------~~~~~~~~~~~~~~ 56 (182)
T d1e5qa1 1 ATKSVLMLGS-GFVTRPTLDVLTDSGI---KVTVACRTL------ESAKKLS--------------AGVQHSTPISLDVN 56 (182)
T ss_dssp CCCEEEEECC-STTHHHHHHHHHTTTC---EEEEEESCH------HHHHHHH--------------TTCTTEEEEECCTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC---EEEEEECCh------HHHHHHH--------------hccccccccccccc
Confidence 3689999986 9999999999999987 789999985 3443331 12233444444444
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcC
Q psy7538 109 QLKLGISEIDKKELIDNVDIVYHVA 133 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~vd~ViH~A 133 (543)
.. ......+...|.++.+.
T Consensus 57 ~~------~~~~~~i~~~~~~i~~~ 75 (182)
T d1e5qa1 57 DD------AALDAEVAKHDLVISLI 75 (182)
T ss_dssp CH------HHHHHHHTTSSEEEECS
T ss_pred ch------hhhHhhhhccceeEeec
Confidence 43 35667777888888654
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=96.99 E-value=0.006 Score=51.09 Aligned_cols=115 Identities=11% Similarity=0.153 Sum_probs=72.3
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
++|.|.|+ |.+|+.++-.|+.++ -+.+|.++++.+..... ...++.+. .....+.....+|..
T Consensus 2 ~KI~IIGa-G~VG~~~a~~l~~~~-l~~el~L~D~~~~~~~g--~a~Dl~~~-----------~~~~~~~~~~~~~~~-- 64 (142)
T d1y6ja1 2 SKVAIIGA-GFVGASAAFTMALRQ-TANELVLIDVFKEKAIG--EAMDINHG-----------LPFMGQMSLYAGDYS-- 64 (142)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTT-CSSEEEEECCC---CCH--HHHHHTTS-----------CCCTTCEEEC--CGG--
T ss_pred CeEEEECC-CHHHHHHHHHHHhcC-CCCEEEEEeccCCccce--eeeeeccC-----------cccCCCeeEeeCcHH--
Confidence 47889997 999999999999885 46689999987654322 11222211 112234444333322
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEec
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIST 174 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 174 (543)
.++++|+|+-+|+..+- .+...+..+.|+.-.+.+.+.+.+. +.+.++.+-|
T Consensus 65 -----------~~~~adivvitag~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~-~p~ai~ivvt 117 (142)
T d1y6ja1 65 -----------DVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKY-YNHGVILVVS 117 (142)
T ss_dssp -----------GGTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHH-CCSCEEEECS
T ss_pred -----------HhCCCceEEEecccccCcCcchhHHhhHHHHHHHHHHHHhhcc-CCCceEEEec
Confidence 35789999999987643 4556678899999999999998887 5566554443
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=96.98 E-value=0.0074 Score=51.26 Aligned_cols=120 Identities=14% Similarity=0.156 Sum_probs=71.0
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcC-----EEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEE
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVK-----KIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVI 103 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~-----~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i 103 (543)
+.++|.|+||+|++|++++-.|..... +. .+.++.-.+ . .+.++... .+ +. .........+
T Consensus 3 ~p~KV~IiGA~G~VG~~~a~~l~~~~l-~~~~~~~~~~l~~~~~-~---~~~~~~~~----~~-~~----~~~~~~~~~~ 68 (154)
T d1y7ta1 3 APVRVAVTGAAGQIGYSLLFRIAAGEM-LGKDQPVILQLLEIPQ-A---MKALEGVV----ME-LE----DCAFPLLAGL 68 (154)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTT-TCTTCCEEEEEECCGG-G---HHHHHHHH----HH-HH----TTTCTTEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhccc-cccccchhHhHhcccc-c---hhhHcCch----hh-hh----cccccccccc
Confidence 356999999999999999999987632 11 122222221 1 12222110 00 00 1111223333
Q ss_pred EccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEE
Q psy7538 104 SGDITQLKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYI 172 (543)
Q Consensus 104 ~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~v 172 (543)
... . +....++++|+|+-+|+..+- .++..+.+..|+.-.+.+.+...+......+|.+
T Consensus 69 ~~~-~---------~~~~~~~~advViitaG~~~~pg~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~viv 128 (154)
T d1y7ta1 69 EAT-D---------DPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLV 128 (154)
T ss_dssp EEE-S---------CHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred ccC-C---------chhhhcccccEEEeecCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEE
Confidence 221 1 244667899999999997653 4566778899999999999999885222344433
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=96.92 E-value=0.002 Score=54.39 Aligned_cols=37 Identities=16% Similarity=0.326 Sum_probs=29.0
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhC-CCcCEEEEEecCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLE-PNVKKIYLLMRTK 67 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g-~~v~~V~~l~R~~ 67 (543)
|+|.|.||||++|+.|++.|++.. +.+..++.+..+.
T Consensus 1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~ 38 (147)
T d1mb4a1 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQ 38 (147)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSC
T ss_pred CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEecccc
Confidence 689999999999999999998642 3445777766554
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=96.91 E-value=0.0016 Score=57.18 Aligned_cols=37 Identities=22% Similarity=0.396 Sum_probs=28.6
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
+++|.|.||||++|+.|++-|... |++.-.++..++.
T Consensus 1 MikVaIiGATGyvG~eLlrlL~~H-P~~ei~~l~~~s~ 37 (179)
T d2g17a1 1 MLNTLIVGASGYAGAELVSYVNRH-PHMTITALTVSAQ 37 (179)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHC-TTEEEEEEEEETT
T ss_pred CcEEEEECcccHHHHHHHHHHHhC-CCCceEeeEeecc
Confidence 478999999999999999977765 7884445555543
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=96.76 E-value=0.0088 Score=49.91 Aligned_cols=115 Identities=16% Similarity=0.159 Sum_probs=76.2
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|.|.|| |.+|+.++..|+.++ -+.+|.++++.+.. ++....++.+. .....+.....+|..
T Consensus 1 mKI~IIGa-G~VG~~~a~~l~~~~-l~~el~L~Di~~~~--~~g~~~Dl~~~-----------~~~~~~~~~~~~~~~-- 63 (140)
T d1a5za1 1 MKIGIVGL-GRVGSSTAFALLMKG-FAREMVLIDVDKKR--AEGDALDLIHG-----------TPFTRRANIYAGDYA-- 63 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHT-CCSEEEEECSSHHH--HHHHHHHHHHH-----------GGGSCCCEEEECCGG--
T ss_pred CEEEEECc-CHHHHHHHHHHHhCC-CCCEEEEEeccccc--ccchhcccccc-----------ccccccccccCCcHH--
Confidence 68999996 999999999898885 45689888876421 11111111111 111234444444422
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEec
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIST 174 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 174 (543)
.++++|+|+-+|+..+- .+...+....|..-.+.+.+...+. +.+.++.+-|
T Consensus 64 -----------~~~~adivvitag~~~~~g~~r~dl~~~N~~I~~~i~~~i~~~-~p~aivivvt 116 (140)
T d1a5za1 64 -----------DLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKY-APDSIVIVVT 116 (140)
T ss_dssp -----------GGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECS
T ss_pred -----------HhcCCCEEEEecccccCCCcchhhhhccccchHHHHHHHHHhc-CCCcEEEEeC
Confidence 24789999999987654 4555677888999999999998887 5666666654
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=96.72 E-value=0.0015 Score=59.47 Aligned_cols=79 Identities=14% Similarity=0.149 Sum_probs=53.0
Q ss_pred cCCCEEEEEcC----------------cchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhh
Q psy7538 28 YENKSIFLSGG----------------SGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTL 91 (543)
Q Consensus 28 ~~~~~VlITGa----------------tGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~ 91 (543)
++||+||||+| ||-+|.+|++.+.+.|. .|.++.-+...
T Consensus 4 l~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga---~V~li~g~~~~---------------------- 58 (223)
T d1u7za_ 4 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGA---NVTLVSGPVSL---------------------- 58 (223)
T ss_dssp TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTC---EEEEEECSCCC----------------------
T ss_pred cCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCC---chhhhhccccc----------------------
Confidence 67899999975 79999999999999997 66666655432
Q ss_pred cCcCCCCceEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCC
Q psy7538 92 RGKSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRF 138 (543)
Q Consensus 92 ~~~~~~~~v~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~ 138 (543)
.....+..+...-.+.. .+.+...++++|++|++||...|
T Consensus 59 ---~~p~~~~~~~~~t~~~m----~~~~~~~~~~~D~~i~aAAvsDf 98 (223)
T d1u7za_ 59 ---PTPPFVKRVDVMTALEM----EAAVNASVQQQNIFIGCAAVADY 98 (223)
T ss_dssp ---CCCTTEEEEECCSHHHH----HHHHHHHGGGCSEEEECCBCCSE
T ss_pred ---CcccccccceehhhHHH----HHHHHhhhccceeEeeeechhhh
Confidence 12234555543221110 01233445689999999998776
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.72 E-value=0.018 Score=48.38 Aligned_cols=118 Identities=14% Similarity=0.161 Sum_probs=76.1
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
.+++|.|.|| |.+|+.++..|+..+. +.+|.++++.+... +....++.+. . ......+....+|..
T Consensus 5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l-~~el~L~Di~~~~~--~g~a~Dl~~~---------~-~~~~~~~~~~~~d~~ 70 (148)
T d1ldna1 5 GGARVVVIGA-GFVGASYVFALMNQGI-ADEIVLIDANESKA--IGDAMDFNHG---------K-VFAPKPVDIWHGDYD 70 (148)
T ss_dssp TSCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHHHH--HHHHHHHHHH---------T-TSSSSCCEEEECCGG
T ss_pred CCCeEEEECc-CHHHHHHHHHHHhcCC-CceEEEEeeccccc--cchhccHhhC---------c-cccCCCeEEEECCHH
Confidence 4679999996 9999999999999863 56899888764211 1111122110 0 111233444455432
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEec
Q psy7538 109 QLKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIST 174 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 174 (543)
.++++|+|+.+|+..+- .+...+....|+.-.+.+.+...+. +.+.++.+-|
T Consensus 71 -------------~l~daDvvvitag~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~~ivvt 123 (148)
T d1ldna1 71 -------------DCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMAS-GFQGLFLVAT 123 (148)
T ss_dssp -------------GTTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHH-TCCSEEEECS
T ss_pred -------------HhccceeEEEecccccccCcchhHHHHHHHHHHHHHHHHHHhh-CCCceEEEec
Confidence 24689999999987643 3444566788999999999888887 5555554433
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=96.71 E-value=0.0015 Score=57.09 Aligned_cols=41 Identities=29% Similarity=0.396 Sum_probs=31.8
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKT 71 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~ 71 (543)
+++|.|.||||++|..|++-|.+. |++.-+++..|+..++.
T Consensus 1 MikVaIvGATGyvG~eLirlL~~H-P~~ei~~l~s~~~aG~~ 41 (176)
T d1vkna1 1 MIRAGIIGATGYTGLELVRLLKNH-PEAKITYLSSRTYAGKK 41 (176)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHC-TTEEEEEEECSTTTTSB
T ss_pred CeEEEEECCCcHHHHHHHHHHHhC-CCceEEEeeccccCCCc
Confidence 468999999999999999977665 88865566666665544
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=96.70 E-value=0.0062 Score=51.78 Aligned_cols=119 Identities=15% Similarity=0.151 Sum_probs=75.0
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDIT 108 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~ 108 (543)
+.+||.|.|+ |.+|+.++..|...+ +.++.+++..+... +....++.... ............
T Consensus 6 k~~KI~IIGa-G~VG~~lA~~l~~~~--~~el~L~D~~~~~~--~g~a~Dl~~~~----------~~~~~~~~~~~~--- 67 (154)
T d1pzga1 6 RRKKVAMIGS-GMIGGTMGYLCALRE--LADVVLYDVVKGMP--EGKALDLSHVT----------SVVDTNVSVRAE--- 67 (154)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHT--CCEEEEECSSSSHH--HHHHHHHHHHH----------HHTTCCCCEEEE---
T ss_pred CCCcEEEECC-CHHHHHHHHHHHhCC--CceEEEEEeccccc--hhHHHHHhhhc----------cccCCeeEEecc---
Confidence 4679999997 999999998887775 45888877655311 11111111100 000011111111
Q ss_pred CCCCCCCHHHHHHHhcCccEEEEcCccCCCc-c-----cHHHHHHHHHHHHHHHHHHHHhccCCceEEEEec
Q psy7538 109 QLKLGISEIDKKELIDNVDIVYHVAATIRFD-E-----PIKTAVILNTRGTRDMLELSKQMKNLKCFTYIST 174 (543)
Q Consensus 109 ~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~-~-----~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 174 (543)
. +.+..++++|+|+-+|+..+.. + ...+....|+.-.+.+++.+.+. +.+.++.+-|
T Consensus 68 --~------~~~~~~~~adiVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~-~p~aiviivs 130 (154)
T d1pzga1 68 --Y------SYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKY-CPKTFIIVVT 130 (154)
T ss_dssp --C------SHHHHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEEEECC
T ss_pred --C------chhhhhcCCCeEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhc-CCCcEEEEeC
Confidence 1 3556778999999999876432 1 33456888999999999999887 6677776655
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=96.68 E-value=0.004 Score=52.51 Aligned_cols=116 Identities=8% Similarity=0.108 Sum_probs=72.1
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|+|.|.|+ |.+|..++-.|+.+| -+.+|.+.++.+... +....++.+.. ...........+|..
T Consensus 2 kKI~IIGa-G~VG~~~a~~l~~~~-~~~elvL~Di~~~~~--~g~~~Dl~~a~----------~~~~~~~~~~~~d~~-- 65 (146)
T d1hyha1 2 RKIGIIGL-GNVGAAVAHGLIAQG-VADDYVFIDANEAKV--KADQIDFQDAM----------ANLEAHGNIVINDWA-- 65 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHT-CCSEEEEECSSHHHH--HHHHHHHHHHG----------GGSSSCCEEEESCGG--
T ss_pred CeEEEECc-CHHHHHHHHHHHhcC-CCceEEEEecccchh--hhHHHhhhccc----------cccCCccceeccCHH--
Confidence 78999995 999999999999886 345888887754211 11111221110 111123334445432
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCCCc-----ccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEec
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIRFD-----EPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIST 174 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~~~-----~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 174 (543)
.++++|+|+-+|+..+.. +...+..+.|+.-.+.+.+..++. +.+.++.+-|
T Consensus 66 -----------~l~~adiVVitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~-~p~aivivvt 122 (146)
T d1hyha1 66 -----------ALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKES-GFHGVLVVIS 122 (146)
T ss_dssp -----------GGTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHT-TCCSEEEECS
T ss_pred -----------HhccccEEEEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhc-CCCeEEEEec
Confidence 247999999999875421 112235778999999999988887 5666665554
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=96.55 E-value=0.0099 Score=49.75 Aligned_cols=116 Identities=13% Similarity=0.119 Sum_probs=75.3
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
.||.|.|+ |.+|++++-.|+.++ -+.++.++++.++. ++....++..... ..........+
T Consensus 2 ~Ki~IIGa-G~VG~~~a~~l~~~~-l~~ElvL~D~~~~~--~~g~a~Dl~~a~~-----------~~~~~~i~~~~---- 62 (143)
T d1llda1 2 TKLAVIGA-GAVGSTLAFAAAQRG-IAREIVLEDIAKER--VEAEVLDMQHGSS-----------FYPTVSIDGSD---- 62 (143)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT-CCSEEEEECSSHHH--HHHHHHHHHHTGG-----------GSTTCEEEEES----
T ss_pred CEEEEECC-CHHHHHHHHHHHhcC-CCcEEEEEEecccc--chhHHHHHHhccc-----------cCCCceeecCC----
Confidence 47999996 999999999999885 45688888876422 1111112222111 11222333221
Q ss_pred CCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEec
Q psy7538 111 KLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIST 174 (543)
Q Consensus 111 ~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 174 (543)
+++ .++++|+|+-+|+..+- .+...+.+..|..-.+.+.+...+. +.+.++.+-|
T Consensus 63 -------~~~-~~~daDvVVitaG~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~-~p~ai~ivvt 118 (143)
T d1llda1 63 -------DPE-ICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYMLIT 118 (143)
T ss_dssp -------CGG-GGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECC
T ss_pred -------CHH-HhhCCcEEEEecccccCCCCchhhhhhhhHHHHHHHHHHHHhh-CCCeEEEEeC
Confidence 122 35789999999998653 4556678899999999999988887 5666655444
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=96.43 E-value=0.0074 Score=51.24 Aligned_cols=112 Identities=13% Similarity=0.073 Sum_probs=66.6
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCC----CcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEE
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEP----NVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVIS 104 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~----~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~ 104 (543)
+.++|.|+||+|.+|++++-.|+..+. ....++++...+. .+..+.+- .+...........+.
T Consensus 2 ~p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~----~~~~~~l~---------~~~~~~~~~~~~~~~ 68 (154)
T d5mdha1 2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPM----MGVLDGVL---------MELQDCALPLLKDVI 68 (154)
T ss_dssp CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGG----HHHHHHHH---------HHHHHTCCTTEEEEE
T ss_pred CceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccc----hhhhhhhh---------hhhcccccccccccc
Confidence 357999999999999999998876421 1224554444332 22222110 000001111222222
Q ss_pred ccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhc
Q psy7538 105 GDITQLKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQM 163 (543)
Q Consensus 105 gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~ 163 (543)
+ .. +....++++|+|+-+|+..+- .++..+.++.|..-.+.+.+...+.
T Consensus 69 ~--~~--------~~~~~~~~~dvVVitag~~~~~g~sr~dll~~N~~i~k~~~~~i~k~ 118 (154)
T d5mdha1 69 A--TD--------KEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKY 118 (154)
T ss_dssp E--ES--------CHHHHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHH
T ss_pred c--Cc--------ccccccCCceEEEEecccCCCCCCchhHHHHHhHHHHHHHHHHHHhh
Confidence 1 11 244667899999999987653 3455567889999999998887664
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=96.39 E-value=0.015 Score=48.54 Aligned_cols=116 Identities=16% Similarity=0.121 Sum_probs=74.4
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEE-EccCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVI-SGDITQ 109 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i-~gDl~~ 109 (543)
|+|.|+|| |.+|+.++..|+..+ -+.+|.++++.+.....+ ..++.+...+ ...+..+. .+|.
T Consensus 1 mKI~IIGa-G~VG~~la~~l~~~~-l~~el~L~Di~~~~~~~~--~~d~~~~~~~----------~~~~~~i~~~~~~-- 64 (142)
T d1guza1 1 MKITVIGA-GNVGATTAFRLAEKQ-LARELVLLDVVEGIPQGK--ALDMYESGPV----------GLFDTKVTGSNDY-- 64 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT-CCSEEEEECSSSSHHHHH--HHHHHTTHHH----------HTCCCEEEEESCG--
T ss_pred CEEEEECc-CHHHHHHHHHHHhCC-CCceEEEeccccccchhh--hhhhhcccch----------hcccceEEecCCH--
Confidence 68999996 999999999998875 356899888776421111 1122111111 11122232 2221
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCccCC-CcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEec
Q psy7538 110 LKLGISEIDKKELIDNVDIVYHVAATIR-FDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIST 174 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~ViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 174 (543)
+.++++|+|+-+|+..+ ..+.-.+..+.|..-.+.+.+...+. +.+.++.+-|
T Consensus 65 -----------~~~~dadvvvitag~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~-~p~aivivvt 118 (142)
T d1guza1 65 -----------ADTANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKH-SKNPIIIVVS 118 (142)
T ss_dssp -----------GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CSSCEEEECC
T ss_pred -----------HHhcCCeEEEEEEecCCCCCCchHHHHHHHHHHHHHHHHHhhcc-CCCeEEEEec
Confidence 23579999999998754 33555677889999999999888886 5566655543
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=96.38 E-value=0.0022 Score=56.38 Aligned_cols=42 Identities=21% Similarity=0.389 Sum_probs=31.9
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKT 71 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~ 71 (543)
+..+|.|.||||++|..|++-|.+. |.+.-+++..++..++.
T Consensus 4 ~kikVaIlGATGyvG~elirLL~~H-P~~ei~~l~S~~~aG~~ 45 (183)
T d2cvoa1 4 EEVRIAVLGASGYTGAEIVRLLANH-PQFRIKVMTADRKAGEQ 45 (183)
T ss_dssp SCEEEEEESCSSHHHHHHHHHHTTC-SSEEEEEEECSTTTTSC
T ss_pred CccEEEEECcccHHHHHHHHHHHhC-CCceEEEEeccccCCCc
Confidence 3458999999999999999888876 88854445556555554
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.36 E-value=0.037 Score=45.98 Aligned_cols=116 Identities=16% Similarity=0.101 Sum_probs=74.3
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEE-EccCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVI-SGDITQ 109 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i-~gDl~~ 109 (543)
|+|.|.|+ |.+|+.++-.|+.++ -+.++.++++.+ ++.+. ...| |..-. +......... .+|.
T Consensus 1 MKI~IIGa-G~VG~~~a~~l~~~~-~~~elvL~Di~~------~~~~g----~alD-l~~~~-~~~~~~~~i~~~~d~-- 64 (142)
T d1ojua1 1 MKLGFVGA-GRVGSTSAFTCLLNL-DVDEIALVDIAE------DLAVG----EAMD-LAHAA-AGIDKYPKIVGGADY-- 64 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHS-CCSEEEEECSSH------HHHHH----HHHH-HHHHH-HTTTCCCEEEEESCG--
T ss_pred CEEEEECc-CHHHHHHHHHHHhcC-cCceEEEEeccc------chhhH----HHHH-Hhhhc-cccCCCCccccCCCH--
Confidence 68999996 999999999888885 567899888753 22211 0001 00000 1111122222 2332
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEec
Q psy7538 110 LKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIST 174 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 174 (543)
+.++++|+|+-.|+..+- .+...+....|..-.+.+.+..++. +.+.++.+-|
T Consensus 65 -----------~~~~~adiVvitag~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~-~p~aivivvt 118 (142)
T d1ojua1 65 -----------SLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKILVVT 118 (142)
T ss_dssp -----------GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEECS
T ss_pred -----------HHhccccEEEEeccccCCCCCchHHHHHHhhHHHHHHHHHHHhh-CCCcEEEEec
Confidence 245799999999986543 4555678888999999999998887 5566665555
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=96.30 E-value=0.018 Score=48.95 Aligned_cols=121 Identities=17% Similarity=0.151 Sum_probs=78.4
Q ss_pred hhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEE
Q psy7538 25 AKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVIS 104 (543)
Q Consensus 25 ~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~ 104 (543)
......++|.|.|+ |.+|+.++-.|..+| -+.++.+.++.++.. +....++.+...| .......-.
T Consensus 15 ~~~~~~~KV~IIGa-G~VG~~~A~~l~~~~-l~~ElvLiD~~~~~a--~g~alDl~h~~~~----------~~~~~~~~~ 80 (160)
T d1i0za1 15 EATVPNNKITVVGV-GQVGMACAISILGKS-LADELALVDVLEDKL--KGEMMDLQHGSLF----------LQTPKIVAD 80 (160)
T ss_dssp CCCCCSSEEEEECC-SHHHHHHHHHHHHTT-CCSEEEEECSCHHHH--HHHHHHHHHTGGG----------CCCSEEEEC
T ss_pred cccCCCCeEEEECC-CHHHHHHHHHHHhcC-CCcEEEEEEeccchh--HHHHHHHhccccc----------cCCCeEEec
Confidence 44566789999996 999999999999986 456888888754221 1111222221111 112222333
Q ss_pred ccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEe
Q psy7538 105 GDITQLKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIS 173 (543)
Q Consensus 105 gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vS 173 (543)
+|.. .++++|+|+.+|+..+- .+...+..+.|+.-.+.+....++. +.+.++.+=
T Consensus 81 ~d~~-------------~~~~adiVVitAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~-~p~aiiivv 136 (160)
T d1i0za1 81 KDYS-------------VTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKY-SPDCIIIVV 136 (160)
T ss_dssp SSGG-------------GGTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEEEEC
T ss_pred cchh-------------hcccccEEEEecCCccccCcchHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEe
Confidence 4432 24789999999997653 3445567888999999999998887 555554443
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=96.27 E-value=0.011 Score=51.68 Aligned_cols=85 Identities=15% Similarity=0.112 Sum_probs=58.5
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
.++++|+|.|+ |-.|+.++..|.+.|. ++|++..|.+.. .+|+.++ ++++.... .......|+
T Consensus 16 l~~k~vlIlGa-GGaarai~~al~~~g~--~~i~i~nR~~~~---~~~~~~l-----~~~~~~~~------~~~~~~~~~ 78 (182)
T d1vi2a1 16 IKGKTMVLLGA-GGASTAIGAQGAIEGL--KEIKLFNRRDEF---FDKALAF-----AQRVNENT------DCVVTVTDL 78 (182)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEEECSSTT---HHHHHHH-----HHHHHHHS------SCEEEEEET
T ss_pred cCCCEEEEECC-cHHHHHHHHHHhhcCC--ceEeeeccchHH---HHHHHHH-----HHHHHhhc------CcceEeeec
Confidence 57899999996 8889999999999864 799999998654 2343332 22332221 222334566
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCcc
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAAT 135 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~ 135 (543)
.+.+ ++...+..+|+||++...
T Consensus 79 ~~~~------~~~~~~~~~diiIN~Tp~ 100 (182)
T d1vi2a1 79 ADQQ------AFAEALASADILTNGTKV 100 (182)
T ss_dssp TCHH------HHHHHHHTCSEEEECSST
T ss_pred cccc------chhhhhcccceeccccCC
Confidence 6543 677777899999999653
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.20 E-value=0.0018 Score=54.61 Aligned_cols=37 Identities=16% Similarity=0.310 Sum_probs=28.0
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRT 66 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~ 66 (543)
.++|.|.||||++|+.|++-|.+..+...++..+..+
T Consensus 2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~ 38 (144)
T d2hjsa1 2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASA 38 (144)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECT
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeec
Confidence 4789999999999999999887554433466665433
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.00 E-value=0.0032 Score=54.97 Aligned_cols=34 Identities=32% Similarity=0.415 Sum_probs=31.1
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
|||.|+||+|-+|++|++.|.+.|+ +|.+..|.+
T Consensus 1 Mki~vigGaG~iG~alA~~la~~G~---~V~l~~R~~ 34 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATLGH---EIVVGSRRE 34 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTC---EEEEEESSH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCC---EEEEEECCH
Confidence 7899999999999999999999998 788889964
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=95.93 E-value=0.011 Score=48.45 Aligned_cols=71 Identities=15% Similarity=0.240 Sum_probs=50.4
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQL 110 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~ 110 (543)
|++.|.|+ |-+|+.+++.|.+.|+ .|.++...+ ++++++. ......+.||.+++
T Consensus 1 k~~iIiG~-G~~G~~la~~L~~~g~---~vvvid~d~------~~~~~~~----------------~~~~~~~~gd~~~~ 54 (134)
T d2hmva1 1 KQFAVIGL-GRFGGSIVKELHRMGH---EVLAVDINE------EKVNAYA----------------SYATHAVIANATEE 54 (134)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTC---CCEEEESCH------HHHHHTT----------------TTCSEEEECCTTCT
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCC---eEEEecCcH------HHHHHHH----------------HhCCcceeeecccc
Confidence 56888885 9999999999999997 456666643 4443321 12345778999998
Q ss_pred CCCCCHHHHHHH-hcCccEEEEcC
Q psy7538 111 KLGISEIDKKEL-IDNVDIVYHVA 133 (543)
Q Consensus 111 ~lgls~~~~~~l-~~~vd~ViH~A 133 (543)
+ .+..+ ++++|.||=+.
T Consensus 55 ~------~l~~a~i~~a~~vi~~~ 72 (134)
T d2hmva1 55 N------ELLSLGIRNFEYVIVAI 72 (134)
T ss_dssp T------HHHHHTGGGCSEEEECC
T ss_pred h------hhhccCCccccEEEEEc
Confidence 7 46655 67899887443
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=95.55 E-value=0.063 Score=44.50 Aligned_cols=115 Identities=17% Similarity=0.217 Sum_probs=69.0
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEE-EccCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVI-SGDITQ 109 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i-~gDl~~ 109 (543)
++|-|.|+ |.+|+.++-.|...+ +.++.+++..+... +.-..++.....+. .....+. .+|..
T Consensus 2 ~KI~IIGa-G~VG~~~A~~l~~~~--l~dl~l~D~~~~~~--~~~~~Dl~~~~~~~----------~~~~~i~~~~d~~- 65 (142)
T d1uxja1 2 KKISIIGA-GFVGSTTAHWLAAKE--LGDIVLLDIVEGVP--QGKALDLYEASPIE----------GFDVRVTGTNNYA- 65 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHT--CSEEEEECSSSSHH--HHHHHHHHTTHHHH----------TCCCCEEEESCGG-
T ss_pred CeEEEECC-CHHHHHHHHHHHhCC--cceEEEEeeccccc--hhHHHHhhcccccc----------CCCCEEEecCcHH-
Confidence 68999996 999999999888774 45788887654321 11112222221111 0122222 23322
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCccCC-CcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEec
Q psy7538 110 LKLGISEIDKKELIDNVDIVYHVAATIR-FDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIST 174 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~ViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 174 (543)
.++++|+|+-+|+..+ ..+...+..+.|+.-.+.+++...+. +.+.++.+-|
T Consensus 66 ------------~~~~advvvitag~~~~~~~~r~dl~~~N~~i~~~i~~~i~k~-~p~aivivvt 118 (142)
T d1uxja1 66 ------------DTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPL-SPNAVIIMVN 118 (142)
T ss_dssp ------------GGTTCSEEEECCSCC---------CHHHHHHHHHHHHHHHGGG-CTTCEEEECS
T ss_pred ------------HhcCCCEEEEeeeccCCcCcchhHHHhHHHHHHHHHHHHHhcc-CCCceEEEeC
Confidence 2478999999999764 33445567888999999999998886 5666666644
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=95.33 E-value=0.017 Score=49.25 Aligned_cols=76 Identities=17% Similarity=0.270 Sum_probs=53.3
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEcc
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGD 106 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gD 106 (543)
-+++++|+|.|+ |-+|+.+++.|...|. ++|++..|+. +|.+++.+ +. +...+ +
T Consensus 21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~--~~i~v~nRt~------~ka~~l~~---------~~------~~~~~--~ 74 (159)
T d1gpja2 21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGV--RAVLVANRTY------ERAVELAR---------DL------GGEAV--R 74 (159)
T ss_dssp CCTTCEEEEESC-CHHHHHHHHHHHHHCC--SEEEEECSSH------HHHHHHHH---------HH------TCEEC--C
T ss_pred CcccCeEEEECC-CHHHHHHHHHHHhcCC--cEEEEEcCcH------HHHHHHHH---------hh------hcccc--c
Confidence 468999999997 9999999999999865 5899999974 22222211 11 11111 1
Q ss_pred CCCCCCCCCHHHHHHHhcCccEEEEcCccCC
Q psy7538 107 ITQLKLGISEIDKKELIDNVDIVYHVAATIR 137 (543)
Q Consensus 107 l~~~~lgls~~~~~~l~~~vd~ViH~AA~v~ 137 (543)
+ +++...+.++|+||.|.+...
T Consensus 75 ~---------~~~~~~l~~~Divi~atss~~ 96 (159)
T d1gpja2 75 F---------DELVDHLARSDVVVSATAAPH 96 (159)
T ss_dssp G---------GGHHHHHHTCSEEEECCSSSS
T ss_pred c---------hhHHHHhccCCEEEEecCCCC
Confidence 2 267788899999999977544
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=95.16 E-value=0.02 Score=43.86 Aligned_cols=37 Identities=16% Similarity=0.248 Sum_probs=30.5
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKK 68 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~ 68 (543)
|+||+|+|.|. |-.|..+++.|.+.|. +|++.+....
T Consensus 3 ~~~K~v~ViGl-G~sG~s~a~~L~~~g~---~v~~~D~~~~ 39 (93)
T d2jfga1 3 YQGKNVVIIGL-GLTGLSCVDFFLARGV---TPRVMDTRMT 39 (93)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHHHTTC---CCEEEESSSS
T ss_pred cCCCEEEEEeE-CHHHHHHHHHHHHCCC---EEEEeeCCcC
Confidence 78999999996 8889999999999987 5566666543
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=94.64 E-value=0.018 Score=42.45 Aligned_cols=37 Identities=16% Similarity=0.325 Sum_probs=31.6
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKK 68 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~ 68 (543)
++++|+|+||+|-+|...++-+...|. +|++..++++
T Consensus 31 ~~~~vlI~gasGgVG~~aiQlak~~G~---~Vi~~t~s~~ 67 (77)
T d1o8ca2 31 QDGEIVVTGASGGVGSTAVALLHKLGY---QVVAVSGRES 67 (77)
T ss_dssp GGCEEEESSTTSHHHHHHHHHHHHTTC---CEEEEESCGG
T ss_pred CCCcEEEEeCCCcHHHHHHHHHHHcCC---eEEEEECCHH
Confidence 678999999999999999997777765 7888888764
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.62 E-value=0.033 Score=47.30 Aligned_cols=118 Identities=14% Similarity=0.049 Sum_probs=72.5
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
++..+|.|.|+ |.+|..++..|+..+ -+.++.++++.+.. +.....++.+.. ...........+|.
T Consensus 17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~-l~~elvL~D~~~~~--a~g~alDl~~~~----------~~~~~~~~~~~~d~ 82 (159)
T d2ldxa1 17 LSRCKITVVGV-GDVGMACAISILLKG-LADELALVDADTDK--LRGEALDLQHGS----------LFLSTPKIVFGKDY 82 (159)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHTTT-SCSEEEEECSCHHH--HHHHHHHHHHTT----------TTCSCCEEEEESSG
T ss_pred CCCCeEEEECC-CHHHHHHHHHHHhcC-CCCEEEEEeCCchh--hhccHHHHhCcc----------hhcCCCeEEeccch
Confidence 45568999995 999999999999886 35688888875421 111112222211 11112222333332
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCccCCC-cccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEe
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAATIRF-DEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYIS 173 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vS 173 (543)
. .+.++|+|+-+|+..+- .+...+.++.|+.-.+.+....++. +.+.++.+=
T Consensus 83 ~-------------~~~~adivvitag~~~~~~~~R~dll~~N~~i~~~i~~~i~~~-~p~~ivivv 135 (159)
T d2ldxa1 83 N-------------VSANSKLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQN-SPDCKIIVV 135 (159)
T ss_dssp G-------------GGTTEEEEEECCSCCCCTTTCSSCTTHHHHHHHHHHTTTHHHH-STTCEEEEC
T ss_pred h-------------hhccccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhcc-CCCeEEEEe
Confidence 2 23789999999987653 2333456788998888888887776 455554443
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=94.38 E-value=0.12 Score=40.68 Aligned_cols=96 Identities=8% Similarity=0.154 Sum_probs=61.4
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDI 107 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl 107 (543)
.+||+|+|.| +|-+|..-++.|++.|. +|.+...... +.+.++. ...++..+..+.
T Consensus 10 l~~k~vlVvG-~G~va~~ka~~ll~~ga---~v~v~~~~~~-----~~~~~~~---------------~~~~i~~~~~~~ 65 (113)
T d1pjqa1 10 LRDRDCLIVG-GGDVAERKARLLLEAGA---RLTVNALTFI-----PQFTVWA---------------NEGMLTLVEGPF 65 (113)
T ss_dssp CBTCEEEEEC-CSHHHHHHHHHHHHTTB---EEEEEESSCC-----HHHHHHH---------------TTTSCEEEESSC
T ss_pred eCCCEEEEEC-CCHHHHHHHHHHHHCCC---eEEEEeccCC-----hHHHHHH---------------hcCCceeeccCC
Confidence 4689999999 59999999999999986 6666654432 2222211 124677777666
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecC
Q psy7538 108 TQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTA 175 (543)
Q Consensus 108 ~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~ 175 (543)
.+.+ +++++.|+-+... ... ...+.+.|++. ..+|.+...
T Consensus 66 ~~~d-----------l~~~~lv~~at~d----~~~----------n~~i~~~a~~~---~ilVNv~D~ 105 (113)
T d1pjqa1 66 DETL-----------LDSCWLAIAATDD----DTV----------NQRVSDAAESR---RIFCNVVDA 105 (113)
T ss_dssp CGGG-----------GTTCSEEEECCSC----HHH----------HHHHHHHHHHT---TCEEEETTC
T ss_pred CHHH-----------hCCCcEEeecCCC----HHH----------HHHHHHHHHHc---CCEEEeCCC
Confidence 6533 4678888854321 211 13577788876 356776654
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=94.28 E-value=0.24 Score=41.24 Aligned_cols=117 Identities=17% Similarity=0.203 Sum_probs=71.7
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
..||-|.|+ |.+|+.++..|..+ .+.++.++++..... +..-.++.....| ...+......+-
T Consensus 3 ~~KI~IIGa-G~VG~~~a~~l~~~--~l~el~L~Di~~~~~--~g~a~Dl~~~~~~----------~~~~~~v~~~~~-- 65 (150)
T d1t2da1 3 KAKIVLVGS-GMIGGVMATLIVQK--NLGDVVLFDIVKNMP--HGKALDTSHTNVM----------AYSNCKVSGSNT-- 65 (150)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHT--TCCEEEEECSSSSHH--HHHHHHHHTHHHH----------HTCCCCEEEECC--
T ss_pred CCeEEEECC-CHHHHHHHHHHHhC--CCCeEEEEeccCCcc--eeeecchhhhccc----------cCCCcEEEeccc--
Confidence 358999995 99999999766665 367888888755321 1111122111111 011222222211
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCccCCCc-c-----cHHHHHHHHHHHHHHHHHHHHhccCCceEEEEec
Q psy7538 110 LKLGISEIDKKELIDNVDIVYHVAATIRFD-E-----PIKTAVILNTRGTRDMLELSKQMKNLKCFTYIST 174 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~ViH~AA~v~~~-~-----~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST 174 (543)
. ..++++|+|+-+|+..+.. + ...+....|..-.+.+.+..++. ..+.++.+-|
T Consensus 66 ---------~-~~~~~advvvitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~-~p~aivivvt 125 (150)
T d1t2da1 66 ---------Y-DDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKN-CPNAFIIVVT 125 (150)
T ss_dssp ---------G-GGGTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTSEEEECS
T ss_pred ---------c-cccCCCcEEEEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhc-CCCeEEEEec
Confidence 1 2347899999999965431 1 23456888999999999999887 6677666544
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=94.23 E-value=0.063 Score=46.35 Aligned_cols=37 Identities=14% Similarity=0.122 Sum_probs=31.8
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
-+|.+|+|+||+|-+|...++-....|. +|++.+|++
T Consensus 28 ~~G~~VlV~ga~ggvG~~aiqlak~~Ga---~vi~~~~~~ 64 (182)
T d1v3va2 28 KGGETVLVSAAAGAVGSVVGQIAKLKGC---KVVGAAGSD 64 (182)
T ss_dssp CSSCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESSH
T ss_pred CCCCEEEEEeCCCchhHHHHHHHHccCC---EEEEeCCCH
Confidence 4589999999999999999987777764 899998864
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=93.90 E-value=0.029 Score=48.16 Aligned_cols=38 Identities=8% Similarity=0.218 Sum_probs=31.8
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKK 68 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~ 68 (543)
-+|++|+|+||+|-+|...++-+...|. +|++.+++++
T Consensus 26 ~~g~~VlI~ga~G~vG~~aiqlak~~G~---~vi~~~~~~~ 63 (171)
T d1iz0a2 26 RPGEKVLVQAAAGALGTAAVQVARAMGL---RVLAAASRPE 63 (171)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTC---EEEEEESSGG
T ss_pred CCCCEEEEEeccccchhhhhhhhccccc---cccccccccc
Confidence 3688999999999999999988777764 7888888653
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=93.72 E-value=0.18 Score=44.22 Aligned_cols=80 Identities=14% Similarity=0.153 Sum_probs=50.7
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCc-------hhHHHHhhcCcCCCCceEEE
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESP-------VFDALKTLRGKSILQKIQVI 103 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~-------~f~~l~~~~~~~~~~~v~~i 103 (543)
|+|.|.| .|++|..++..|.+.|+ +|++.+.. .++++.+-+.. .-+.|.... ...+...
T Consensus 1 MkI~ViG-lG~vGl~~a~~la~~g~---~V~g~D~n------~~~i~~ln~g~~p~~e~~~~~~l~~~~---~~~~~~~- 66 (202)
T d1mv8a2 1 MRISIFG-LGYVGAVCAGCLSARGH---EVIGVDVS------STKIDLINQGKSPIVEPGLEALLQQGR---QTGRLSG- 66 (202)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTC---EEEEECSC------HHHHHHHHTTCCSSCCTTHHHHHHHHH---HTTCEEE-
T ss_pred CEEEEEC-CCHhHHHHHHHHHhCCC---cEEEEeCC------HHHHHHhcccCCcccchhhhhhhhhhh---ccccccc-
Confidence 6899997 79999999999999998 77888764 34555543311 111111111 0011111
Q ss_pred EccCCCCCCCCCHHHHHHHhcCccEEEEcCccC
Q psy7538 104 SGDITQLKLGISEIDKKELIDNVDIVYHVAATI 136 (543)
Q Consensus 104 ~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v 136 (543)
. .+....++++|++|.|..+.
T Consensus 67 ------~------~~~~~~i~~~d~i~i~VpTP 87 (202)
T d1mv8a2 67 ------T------TDFKKAVLDSDVSFICVGTP 87 (202)
T ss_dssp ------E------SCHHHHHHTCSEEEECCCCC
T ss_pred ------C------CCHHHHHhhCCEEEEecCcc
Confidence 1 14677788999999998864
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.61 E-value=0.14 Score=43.68 Aligned_cols=36 Identities=22% Similarity=0.203 Sum_probs=30.7
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
+|.+|||+||+|-+|...++-+...|. +|+++++++
T Consensus 28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~---~vi~~~~~~ 63 (174)
T d1yb5a2 28 AGESVLVHGASGGVGLAACQIARAYGL---KILGTAGTE 63 (174)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESSH
T ss_pred CCCEEEEEeccccccccccccccccCc---ccccccccc
Confidence 688999999999999999988877764 788888763
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=93.49 E-value=0.31 Score=39.34 Aligned_cols=95 Identities=17% Similarity=0.279 Sum_probs=61.7
Q ss_pred hhcCCCEEEEEcCc---chhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEE
Q psy7538 26 KTYENKSIFLSGGS---GFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQV 102 (543)
Q Consensus 26 ~~~~~~~VlITGat---GFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~ 102 (543)
.||+.++|.|.||| |-.|..+++.|.+.| -.+||.+....+. ..++..
T Consensus 4 ~lf~PksIAVVGaS~~~~~~g~~v~~~L~~~~--~g~v~pVnP~~~~---------------------------i~G~~~ 54 (129)
T d2csua1 4 YFFNPKGIAVIGASNDPKKLGYEVFKNLKEYK--KGKVYPVNIKEEE---------------------------VQGVKA 54 (129)
T ss_dssp TTTSCSEEEEETCCSCTTSHHHHHHHHHTTCC--SSEEEEECSSCSE---------------------------ETTEEC
T ss_pred HhCCCCeEEEEccCCCCCCcHHHHHHHHHHcC--CCcEEEeccCccc---------------------------cCCeEe
Confidence 47899999999999 999999999987654 2378876543210 011111
Q ss_pred EEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecCccc
Q psy7538 103 ISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTAYCH 178 (543)
Q Consensus 103 i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~y~~ 178 (543)
+ -++. ++-..+|.++-+... + .+..+++.|.+. +++.++.+|+.+..
T Consensus 55 y-~sl~------------dlp~~vDlvvi~vp~-------~--------~~~~~~~~~~~~-g~~~~vi~s~Gf~e 101 (129)
T d2csua1 55 Y-KSVK------------DIPDEIDLAIIVVPK-------R--------FVKDTLIQCGEK-GVKGVVIITAGFGE 101 (129)
T ss_dssp B-SSTT------------SCSSCCSEEEECSCH-------H--------HHHHHHHHHHHH-TCCEEEECCCSSTT
T ss_pred e-cchh------------hcCCCCceEEEecCh-------H--------HhHHHHHHHHHc-CCCEEEEecccccc
Confidence 1 1233 333568988855421 1 134577888887 89999988887654
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=93.38 E-value=0.097 Score=44.90 Aligned_cols=36 Identities=11% Similarity=0.274 Sum_probs=31.1
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
+|.+|||+||+|-+|...++-+...|. +|++.++++
T Consensus 25 ~g~~VlI~ga~g~vG~~~iqla~~~g~---~vi~~~~~~ 60 (183)
T d1pqwa_ 25 PGERVLIHSATGGVGMAAVSIAKMIGA---RIYTTAGSD 60 (183)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTC---EEEEEESSH
T ss_pred CCCEEEEECCCCCcccccchhhccccc---cceeeeccc
Confidence 578999999999999999998888875 788888764
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=93.35 E-value=0.1 Score=43.84 Aligned_cols=34 Identities=21% Similarity=0.338 Sum_probs=25.1
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEe
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLM 64 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~ 64 (543)
=+|.|.||||++|..|++-|.+....+.++..+.
T Consensus 2 ~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~ 35 (154)
T d2gz1a1 2 YTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLA 35 (154)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHcCCCCceEEEEec
Confidence 3799999999999999986655431344666664
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=93.19 E-value=0.13 Score=40.48 Aligned_cols=67 Identities=15% Similarity=0.183 Sum_probs=49.3
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+.+|.|.| .|.+|+-++....+.|. ++++++..+.. |...---.++.+|..|
T Consensus 11 ~~kigIlG-gGQL~rMla~aA~~lG~---~v~v~d~~~~~------------------------PA~~va~~~i~~~~~d 62 (111)
T d1kjqa2 11 ATRVMLLG-SGELGKEVAIECQRLGV---EVIAVDRYADA------------------------PAMHVAHRSHVINMLD 62 (111)
T ss_dssp CCEEEEES-CSHHHHHHHHHHHTTTC---EEEEEESSTTC------------------------GGGGGSSEEEECCTTC
T ss_pred CCEEEEEe-CCHHHHHHHHHHHHCCC---EEEEEcCCCCC------------------------chhhcCCeEEECCCCC
Confidence 45899999 69999999999999987 78888887643 2211122577899998
Q ss_pred CCCCCCHHHHHHHhc--CccEEE
Q psy7538 110 LKLGISEIDKKELID--NVDIVY 130 (543)
Q Consensus 110 ~~lgls~~~~~~l~~--~vd~Vi 130 (543)
.+ .+..+.. .+|+|-
T Consensus 63 ~~------~l~~~~~~~~~DviT 79 (111)
T d1kjqa2 63 GD------ALRRVVELEKPHYIV 79 (111)
T ss_dssp HH------HHHHHHHHHCCSEEE
T ss_pred HH------HHHHHHHhhCCceEE
Confidence 75 6666653 578884
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=93.13 E-value=0.04 Score=46.09 Aligned_cols=36 Identities=25% Similarity=0.337 Sum_probs=31.1
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
..++|.|.||+|.+|+.+++.|.+.|+ +|++..|.+
T Consensus 8 ~~~kI~iIGg~G~mG~~la~~L~~~G~---~V~~~d~~~ 43 (152)
T d2pv7a2 8 DIHKIVIVGGYGKLGGLFARYLRASGY---PISILDRED 43 (152)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTTTC---CEEEECTTC
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHHcCC---CcEeccccc
Confidence 357999999999999999999999998 566777754
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=93.00 E-value=0.034 Score=47.39 Aligned_cols=37 Identities=30% Similarity=0.397 Sum_probs=28.7
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
.++|.|.|++|-+|+.+++.+++. .++.-+.++.|+.
T Consensus 4 ~ikI~i~Ga~GrMG~~i~~~i~~~-~~~~lv~~~~~~~ 40 (162)
T d1diha1 4 NIRVAIAGAGGRMGRQLIQAALAL-EGVQLGAALEREG 40 (162)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHS-TTEECCCEECCTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEeccc
Confidence 468999999999999999999887 4654345555554
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=92.91 E-value=0.055 Score=46.42 Aligned_cols=36 Identities=14% Similarity=0.178 Sum_probs=31.6
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
.|.+|+|+||+|-+|..+++-....|. +|++.+++.
T Consensus 28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga---~Vi~~~~s~ 63 (179)
T d1qora2 28 PDEQFLFHAAAGGVGLIACQWAKALGA---KLIGTVGTA 63 (179)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTC---EEEEEESSH
T ss_pred CCCEEEEEccccccchHHHHHHHHhCC---eEeecccch
Confidence 478999999999999999998888875 899998875
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=92.79 E-value=0.058 Score=45.43 Aligned_cols=35 Identities=17% Similarity=0.282 Sum_probs=31.4
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKG 69 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~ 69 (543)
|+|.|.|+ |-+|+.+...|.+.|+ +|.++.|.+..
T Consensus 1 MkI~IiGa-G~iG~~~a~~L~~~G~---~V~~~~r~~~~ 35 (167)
T d1ks9a2 1 MKITVLGC-GALGQLWLTALCKQGH---EVQGWLRVPQP 35 (167)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC---EEEEECSSCCS
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCC---ceEEEEcCHHH
Confidence 79999997 9999999999999997 78899998653
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=92.30 E-value=0.21 Score=42.36 Aligned_cols=38 Identities=21% Similarity=0.377 Sum_probs=27.8
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
|+..+|.|.| +|.+|+..++.|.+. +++.-|-+..|++
T Consensus 1 M~kirvgiiG-~G~ig~~~~~~l~~~-~~~elvav~~~~~ 38 (170)
T d1f06a1 1 MTNIRVAIVG-YGNLGRSVEKLIAKQ-PDMDLVGIFSRRA 38 (170)
T ss_dssp CCCEEEEEEC-CSHHHHHHHHHHTTC-SSEEEEEEEESSS
T ss_pred CCcceEEEEC-ChHHHHHHHHHHHhC-CCcEEEEEEeccc
Confidence 3556899999 699999999888765 6774444555554
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=92.25 E-value=0.13 Score=43.94 Aligned_cols=34 Identities=12% Similarity=0.020 Sum_probs=30.3
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
.|+|.|.|| |-+|..++..|.+.|+ +|.+..|.+
T Consensus 1 sk~iaIiGa-G~~G~~~A~~l~~~G~---~V~~~~r~~ 34 (184)
T d1bg6a2 1 SKTYAVLGL-GNGGHAFAAYLALKGQ---SVLAWDIDA 34 (184)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTC---EEEEECSCH
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCC---EEEEEECCH
Confidence 479999996 9999999999999997 788888864
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=92.06 E-value=0.19 Score=42.51 Aligned_cols=39 Identities=15% Similarity=0.177 Sum_probs=30.6
Q ss_pred hhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCC
Q psy7538 26 KTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKK 68 (543)
Q Consensus 26 ~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~ 68 (543)
+.-.|.+|+|.|+ |-+|...+..+...|. +|+++++++.
T Consensus 24 ~~~~g~~vlI~Ga-G~vG~~a~q~ak~~G~---~vi~~~~~~~ 62 (168)
T d1piwa2 24 GCGPGKKVGIVGL-GGIGSMGTLISKAMGA---ETYVISRSSR 62 (168)
T ss_dssp TCSTTCEEEEECC-SHHHHHHHHHHHHHTC---EEEEEESSST
T ss_pred CcCCCCEEEEECC-CCcchhHHHHhhhccc---cccccccchh
Confidence 3346899999996 9999998877766764 7888888764
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=92.03 E-value=0.13 Score=44.19 Aligned_cols=38 Identities=11% Similarity=0.220 Sum_probs=31.8
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKG 69 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~ 69 (543)
+|.+|||+||+|-+|...++-....|. +|++..++++.
T Consensus 31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga---~Viat~~s~~k 68 (176)
T d1xa0a2 31 ERGPVLVTGATGGVGSLAVSMLAKRGY---TVEASTGKAAE 68 (176)
T ss_dssp GGCCEEESSTTSHHHHHHHHHHHHTTC---CEEEEESCTTC
T ss_pred CCCEEEEEeccchHHHHHHHHHHHcCC---ceEEecCchHH
Confidence 367899999999999999988777775 78888887654
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=91.87 E-value=0.18 Score=40.73 Aligned_cols=25 Identities=16% Similarity=0.102 Sum_probs=22.1
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEP 55 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~ 55 (543)
|+|.|.|++|=+|+.+.+.+.++++
T Consensus 1 mki~i~G~~GrMG~~i~~~~~~~~~ 25 (128)
T d1vm6a3 1 MKYGIVGYSGRMGQEIQKVFSEKGH 25 (128)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC
T ss_pred CEEEEECCCCHHHHHHHHHHhcCCC
Confidence 6899999999999999888877765
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=91.77 E-value=0.1 Score=44.06 Aligned_cols=37 Identities=19% Similarity=0.392 Sum_probs=32.7
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
+||+|+|.|| |+.|-.++..|.+.++++ +|+++.+.+
T Consensus 1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~-~Vtlie~~~ 37 (186)
T d1fcda1 1 AGRKVVVVGG-GTGGATAAKYIKLADPSI-EVTLIEPNT 37 (186)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHCTTS-EEEEECSCS
T ss_pred CCCcEEEECc-cHHHHHHHHHHHHcCCCC-cEEEEECCC
Confidence 4899999995 999999999999999887 888887765
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=91.14 E-value=0.12 Score=44.38 Aligned_cols=33 Identities=12% Similarity=0.166 Sum_probs=28.7
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
|+|.|.| +|-.|.+|+..|.+.|+ +|.+..|..
T Consensus 1 MkI~ViG-aG~~GtalA~~la~~g~---~V~l~~r~~ 33 (180)
T d1txga2 1 MIVSILG-AGAMGSALSVPLVDNGN---EVRIWGTEF 33 (180)
T ss_dssp CEEEEES-CCHHHHHHHHHHHHHCC---EEEEECCGG
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCC---EEEEEEecc
Confidence 7899999 59999999999999987 777877753
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=90.99 E-value=0.36 Score=40.94 Aligned_cols=36 Identities=25% Similarity=0.320 Sum_probs=30.4
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
.++++|+|.|+ |-.|+.++..|.+.+ ++|+++.|+.
T Consensus 16 ~~~k~vlIlGa-GGaarai~~aL~~~~---~~i~I~nR~~ 51 (171)
T d1p77a1 16 RPNQHVLILGA-GGATKGVLLPLLQAQ---QNIVLANRTF 51 (171)
T ss_dssp CTTCEEEEECC-SHHHHTTHHHHHHTT---CEEEEEESSH
T ss_pred CCCCEEEEECC-cHHHHHHHHHHcccC---ceeeeccchH
Confidence 47899999995 777999999998753 4899999985
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=90.27 E-value=0.3 Score=40.46 Aligned_cols=74 Identities=15% Similarity=0.216 Sum_probs=50.5
Q ss_pred EEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCCCC
Q psy7538 32 SIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQLK 111 (543)
Q Consensus 32 ~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~~~ 111 (543)
.|+|.|. |-+|+.+++.|.+.|. .|.++...+.. ..+++++. ...++.++.||.++++
T Consensus 5 HiII~G~-g~~g~~l~~~L~~~~~---~v~vId~d~~~--~~~~~~~~----------------~~~~~~vi~Gd~~d~~ 62 (153)
T d1id1a_ 5 HFIVCGH-SILAINTILQLNQRGQ---NVTVISNLPED--DIKQLEQR----------------LGDNADVIPGDSNDSS 62 (153)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTC---CEEEEECCCHH--HHHHHHHH----------------HCTTCEEEESCTTSHH
T ss_pred EEEEECC-CHHHHHHHHHHHHcCC---CEEEEeccchh--HHHHHHHh----------------hcCCcEEEEccCcchH
Confidence 5888886 8999999999999986 56666654421 11222221 1247889999999876
Q ss_pred CCCCHHHHHHH-hcCccEEEEcC
Q psy7538 112 LGISEIDKKEL-IDNVDIVYHVA 133 (543)
Q Consensus 112 lgls~~~~~~l-~~~vd~ViH~A 133 (543)
.++++ +++++.|+=+.
T Consensus 63 ------~L~~a~i~~a~~vi~~~ 79 (153)
T d1id1a_ 63 ------VLKKAGIDRCRAILALS 79 (153)
T ss_dssp ------HHHHHTTTTCSEEEECS
T ss_pred ------HHHHhccccCCEEEEcc
Confidence 45543 56789888554
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=90.18 E-value=0.23 Score=41.87 Aligned_cols=37 Identities=16% Similarity=0.239 Sum_probs=30.7
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
.|.+|+|.||+|-+|...+..+...|. .+|++..+++
T Consensus 27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~--~~V~~~~~~~ 63 (170)
T d1jvba2 27 PTKTLLVVGAGGGLGTMAVQIAKAVSG--ATIIGVDVRE 63 (170)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTC--CEEEEEESSH
T ss_pred CCCEEEEEeccccceeeeeeccccccc--ccccccccch
Confidence 578999999999999998888887764 4788888764
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=90.14 E-value=0.36 Score=41.39 Aligned_cols=37 Identities=19% Similarity=0.250 Sum_probs=31.6
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKK 68 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~ 68 (543)
+.||+|.|.| .|-||+.+++.|..-|- +|++..|.++
T Consensus 40 l~gk~vgIiG-~G~IG~~va~~l~~~g~---~v~~~d~~~~ 76 (181)
T d1qp8a1 40 IQGEKVAVLG-LGEIGTRVGKILAALGA---QVRGFSRTPK 76 (181)
T ss_dssp CTTCEEEEES-CSTHHHHHHHHHHHTTC---EEEEECSSCC
T ss_pred ccCceEEEec-cccccccceeeeecccc---cccccccccc
Confidence 6789999999 69999999999988765 7888888653
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=90.09 E-value=0.41 Score=40.43 Aligned_cols=36 Identities=22% Similarity=0.262 Sum_probs=31.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
.+||+|+|.|| |-.+++++..|.+.|. +|+++.|++
T Consensus 16 ~~~k~vlIlGa-GGaarai~~al~~~g~---~i~I~nRt~ 51 (170)
T d1nyta1 16 RPGLRILLIGA-GGASRGVLLPLLSLDC---AVTITNRTV 51 (170)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTC---EEEEECSSH
T ss_pred CCCCEEEEECC-cHHHHHHHHHhcccce---EEEeccchH
Confidence 57899999996 7789999999999864 699999975
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.89 E-value=0.012 Score=51.88 Aligned_cols=34 Identities=21% Similarity=0.376 Sum_probs=30.2
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKK 68 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~ 68 (543)
++|.|.|| |.+|+.++..+++.|+ +|.+.++++.
T Consensus 5 kkvaViGa-G~mG~~iA~~~a~~G~---~V~l~D~~~~ 38 (192)
T d1f0ya2 5 KHVTVIGG-GLMGAGIAQVAAATGH---TVVLVDQTED 38 (192)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC---EEEEECSCHH
T ss_pred EEEEEECc-CHHHHHHHHHHHhCCC---cEEEEECChH
Confidence 68999996 9999999999999997 7888888753
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=89.63 E-value=0.36 Score=40.67 Aligned_cols=33 Identities=12% Similarity=0.108 Sum_probs=28.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEE
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLL 63 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l 63 (543)
+.||+|.|.|.+..+|+-|...|.+.|. +|+..
T Consensus 35 l~GK~v~VIGrS~~VG~Pla~lL~~~ga---tVt~~ 67 (166)
T d1b0aa1 35 TFGLNAVVIGASNIVGRPMSMELLLAGC---TTTVT 67 (166)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHTTTC---EEEEE
T ss_pred cccceEEEEeccccccHHHHHHHHHhhc---ccccc
Confidence 5699999999999999999999998875 56544
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=89.62 E-value=0.37 Score=41.06 Aligned_cols=37 Identities=16% Similarity=0.345 Sum_probs=30.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
-.|.+|+|+|| |-+|...+.-+...|. ++|++..+++
T Consensus 27 ~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga--~~Vi~~~~~~ 63 (182)
T d1vj0a2 27 FAGKTVVIQGA-GPLGLFGVVIARSLGA--ENVIVIAGSP 63 (182)
T ss_dssp CBTCEEEEECC-SHHHHHHHHHHHHTTB--SEEEEEESCH
T ss_pred CCCCEEEEECC-Cccchhheeccccccc--cccccccccc
Confidence 35889999996 8899998888887764 5899988864
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=89.32 E-value=0.21 Score=42.14 Aligned_cols=36 Identities=22% Similarity=0.347 Sum_probs=31.0
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
+|+|+|.| .|.+|..+++.|.+.|+++ +|++.+|++
T Consensus 1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~-~I~~~D~~~ 36 (171)
T d2g5ca2 1 MQNVLIVG-VGFMGGSFAKSLRRSGFKG-KIYGYDINP 36 (171)
T ss_dssp CCEEEEES-CSHHHHHHHHHHHHTTCCS-EEEEECSCH
T ss_pred CCEEEEEc-cCHHHHHHHHHHHhcCCCe-EEEEEECCh
Confidence 35799998 6999999999999998776 799888864
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=88.58 E-value=0.73 Score=39.55 Aligned_cols=37 Identities=22% Similarity=0.188 Sum_probs=30.5
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKK 68 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~ 68 (543)
..+++|.|.| .|.||+.+++.|..-|. +|+...+..+
T Consensus 42 l~~~~vgiiG-~G~IG~~va~~l~~fg~---~v~~~d~~~~ 78 (188)
T d1sc6a1 42 ARGKKLGIIG-YGHIGTQLGILAESLGM---YVYFYDIENK 78 (188)
T ss_dssp STTCEEEEEC-CSHHHHHHHHHHHHTTC---EEEEECSSCC
T ss_pred ccceEEEEee-cccchhhhhhhcccccc---eEeecccccc
Confidence 5789999998 89999999998877764 7888877654
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=88.30 E-value=0.39 Score=37.92 Aligned_cols=35 Identities=31% Similarity=0.527 Sum_probs=30.6
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKK 68 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~ 68 (543)
.++|+|.|| |++|-.++..|.+.|. +|+++.|.+.
T Consensus 22 p~~v~IiGg-G~iG~E~A~~l~~~g~---~Vtlv~~~~~ 56 (117)
T d1onfa2 22 SKKIGIVGS-GYIAVELINVIKRLGI---DSYIFARGNR 56 (117)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHTTTC---EEEEECSSSS
T ss_pred CCEEEEECC-chHHHHHHHHHHhccc---cceeeehhcc
Confidence 578999995 9999999999999885 8999998764
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=88.10 E-value=0.19 Score=42.61 Aligned_cols=38 Identities=13% Similarity=0.299 Sum_probs=31.8
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKG 69 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~ 69 (543)
++.+|||+||+|-+|...++-....|. +|+..+|+.++
T Consensus 23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga---~Viat~~s~~k 60 (167)
T d1tt7a2 23 EKGSVLVTGATGGVGGIAVSMLNKRGY---DVVASTGNREA 60 (167)
T ss_dssp GGCCEEEESTTSHHHHHHHHHHHHHTC---CEEEEESSSST
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCC---ceEEEecCHHH
Confidence 356899999999999999988777775 78899997654
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=87.96 E-value=1 Score=37.44 Aligned_cols=37 Identities=14% Similarity=0.168 Sum_probs=29.1
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
.-.|.+|+|+| +|-+|...+.-+...|. +|++..+++
T Consensus 24 ~~~g~~vlV~G-~G~vG~~~~~~ak~~Ga---~vi~v~~~~ 60 (170)
T d1e3ja2 24 VQLGTTVLVIG-AGPIGLVSVLAAKAYGA---FVVCTARSP 60 (170)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHHTTC---EEEEEESCH
T ss_pred CCCCCEEEEEc-ccccchhhHhhHhhhcc---cccccchHH
Confidence 34678999997 68999998877766653 788888864
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=87.91 E-value=0.26 Score=41.35 Aligned_cols=33 Identities=21% Similarity=0.261 Sum_probs=29.1
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
|+|.|.| +|.+|+.+++.|.+.|+ +|++.+|.+
T Consensus 1 MkI~iIG-~G~mG~~lA~~l~~~g~---~V~~~d~~~ 33 (165)
T d2f1ka2 1 MKIGVVG-LGLIGASLAGDLRRRGH---YLIGVSRQQ 33 (165)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTC---EEEEECSCH
T ss_pred CEEEEEe-ecHHHHHHHHHHHHCCC---EEEEEECCc
Confidence 6899998 59999999999999987 788888864
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=87.57 E-value=0.28 Score=41.29 Aligned_cols=37 Identities=16% Similarity=0.162 Sum_probs=28.3
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
.-.|.+|+|.|+ |-+|...++-+...|. ++++.+++.
T Consensus 28 ~~~G~~VlI~Ga-G~vG~~a~qlak~~Ga---~~i~~~~~~ 64 (168)
T d1uufa2 28 AGPGKKVGVVGI-GGLGHMGIKLAHAMGA---HVVAFTTSE 64 (168)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESSG
T ss_pred CCCCCEEEEecc-chHHHHHHHHhhcccc---cchhhccch
Confidence 346899999986 8899998877777764 566777765
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.54 E-value=0.83 Score=38.53 Aligned_cols=33 Identities=12% Similarity=0.197 Sum_probs=28.4
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEE
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLL 63 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l 63 (543)
++||+|.|.|.+.-+|+-|..-|+++|. +|+..
T Consensus 37 l~Gk~vvVIGrS~iVGrPLa~lL~~~ga---tVt~~ 69 (170)
T d1a4ia1 37 IAGRHAVVVGRSKIVGAPMHDLLLWNNA---TVTTC 69 (170)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTC---EEEEE
T ss_pred cccceEEEEecCCccchHHHHHHHhccC---ceEEE
Confidence 5799999999999999999999999875 55543
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=87.07 E-value=0.6 Score=39.95 Aligned_cols=34 Identities=18% Similarity=0.181 Sum_probs=26.2
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRT 66 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~ 66 (543)
.+|||+||+|-+|...++-....|. +.|+...++
T Consensus 32 etVLI~gaaGgVG~~aiQlak~~Ga--~~vi~~~~~ 65 (187)
T d1vj1a2 32 QTMVVSGAAGACGSLAGQIGHLLGC--SRVVGICGT 65 (187)
T ss_dssp CEEEESSTTSTTGGGHHHHHHHTTC--SEEEEEESS
T ss_pred CEEEEECCCchhhHHHHHHHHHcCC--cceecccch
Confidence 7899999999999999887666654 356655554
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.04 E-value=0.3 Score=47.99 Aligned_cols=98 Identities=10% Similarity=0.134 Sum_probs=59.6
Q ss_pred chhhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHH--H---HHHhc---CchhHHHHhhcC
Q psy7538 22 DRIAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQR--V---EELFE---SPVFDALKTLRG 93 (543)
Q Consensus 22 ~~i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~r--l---~~~~~---~~~f~~l~~~~~ 93 (543)
..++.-+++++|||.|+.| +|..+++.|.+.|. ++|.+++...-..+-..| + +++-+ ....++++..+
T Consensus 29 e~~~~~l~~~kVlvvG~Gg-lG~ei~k~L~~~Gv--g~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~n- 104 (426)
T d1yovb1 29 ESLQFLLDTCKVLVIGAGG-LGCELLKNLALSGF--RQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRV- 104 (426)
T ss_dssp SHHHHHHHHCCEEEECSST-THHHHHHHHHTTTC--CCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHS-
T ss_pred HHHHHHHhcCeEEEECCCH-HHHHHHHHHHHcCC--CeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhC-
Confidence 4455567889999999755 99999999999864 678777654322111111 0 00000 01223344333
Q ss_pred cCCCCceEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcC
Q psy7538 94 KSILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVA 133 (543)
Q Consensus 94 ~~~~~~v~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~A 133 (543)
|. -++..+..++.+.+ ...+++.|+||.+.
T Consensus 105 p~--v~i~~~~~~i~~~~--------~~~~~~~DlVi~~~ 134 (426)
T d1yovb1 105 PN--CNVVPHFNKIQDFN--------DTFYRQFHIIVCGL 134 (426)
T ss_dssp TT--CCCEEECSCGGGBC--------HHHHTTCSEEEECC
T ss_pred CC--CceEeeeccccchH--------HHHHHhcchheecc
Confidence 33 36777777776643 35678999999765
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=86.65 E-value=0.99 Score=38.92 Aligned_cols=37 Identities=8% Similarity=0.112 Sum_probs=31.1
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKK 68 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~ 68 (543)
..||+|.|.| .|-||+.+++.|..-|. +|....|..+
T Consensus 47 L~gktvgIiG-~G~IG~~va~~l~~fg~---~v~~~d~~~~ 83 (193)
T d1mx3a1 47 IRGETLGIIG-LGRVGQAVALRAKAFGF---NVLFYDPYLS 83 (193)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHTTTC---EEEEECTTSC
T ss_pred eeCceEEEec-cccccccceeeeecccc---ceeeccCccc
Confidence 5789999999 79999999999987765 7877777654
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=86.16 E-value=1.6 Score=37.60 Aligned_cols=36 Identities=14% Similarity=0.310 Sum_probs=29.9
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
..|++|.|.| .|-||+.+++.|..-|. +|.+..+..
T Consensus 41 l~gk~vgIiG-~G~IG~~va~~l~~fg~---~V~~~d~~~ 76 (197)
T d1j4aa1 41 VRDQVVGVVG-TGHIGQVFMQIMEGFGA---KVITYDIFR 76 (197)
T ss_dssp GGGSEEEEEC-CSHHHHHHHHHHHHTTC---EEEEECSSC
T ss_pred ccCCeEEEec-ccccchhHHHhHhhhcc---cccccCccc
Confidence 5689999999 89999999999987764 777776654
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=86.05 E-value=0.6 Score=39.44 Aligned_cols=36 Identities=14% Similarity=0.010 Sum_probs=28.2
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRT 66 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~ 66 (543)
-.|.+|+|.|+ |-+|...+.-+...|. +.|++..++
T Consensus 27 ~~g~~VlI~G~-G~iG~~~~~~ak~~g~--~~v~~~~~~ 62 (174)
T d1f8fa2 27 TPASSFVTWGA-GAVGLSALLAAKVCGA--SIIIAVDIV 62 (174)
T ss_dssp CTTCEEEEESC-SHHHHHHHHHHHHHTC--SEEEEEESC
T ss_pred CCCCEEEEeCC-CHHHhhhhhccccccc--ceeeeeccH
Confidence 35789999997 9999999988877775 466666654
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=86.02 E-value=1.2 Score=41.01 Aligned_cols=34 Identities=18% Similarity=0.274 Sum_probs=29.0
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEec
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMR 65 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R 65 (543)
++|++|.|-| .|-+|++++++|.+.|. +|..++-
T Consensus 34 L~gktvaIqG-fGnVG~~~A~~L~e~Ga---kvv~vsD 67 (293)
T d1hwxa1 34 FGDKTFAVQG-FGNVGLHSMRYLHRFGA---KCVAVGE 67 (293)
T ss_dssp STTCEEEEEC-CSHHHHHHHHHHHHTTC---EEEEEEE
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHCCC---EEEEEEc
Confidence 6789999999 69999999999999985 6666553
|
| >d1vdca2 c.3.1.5 (A:118-243) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=85.85 E-value=0.84 Score=36.67 Aligned_cols=50 Identities=16% Similarity=0.256 Sum_probs=33.9
Q ss_pred hhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHH
Q psy7538 26 KTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEEL 79 (543)
Q Consensus 26 ~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~ 79 (543)
.||+||.|.|.|| |--+-.-+..|.+-. ++|+++.|.++-.......+++
T Consensus 30 ~~frgk~V~VvGg-GdsA~e~A~~L~~~a---~~V~li~r~~~~ra~~~~~~~l 79 (130)
T d1vdca2 30 PIFRNKPLAVIGG-GDSAMEEANFLTKYG---SKVYIIHRRDAFRASKIMQQRA 79 (130)
T ss_dssp GGGTTSEEEEECC-SHHHHHHHHHHTTTS---SEEEEECSSSSCCSCHHHHHHH
T ss_pred HHhCCCEEEEEcC-chHHHHHHHHHhCCC---CcEEEEEeccccccchhhhhcc
Confidence 4999999999997 655555555555543 5999999987644333333344
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=85.36 E-value=0.24 Score=42.89 Aligned_cols=36 Identities=14% Similarity=0.149 Sum_probs=29.9
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
+.+++|.|.| +|-.|.+++..|.+.|+ +|.+..|.+
T Consensus 5 ~~m~KI~ViG-aG~wGtAlA~~La~~g~---~V~l~~r~~ 40 (189)
T d1n1ea2 5 LYLNKAVVFG-SGAFGTALAMVLSKKCR---EVCVWHMNE 40 (189)
T ss_dssp CCEEEEEEEC-CSHHHHHHHHHHHTTEE---EEEEECSCH
T ss_pred ceeceEEEEC-CCHHHHHHHHHHHHcCC---eEEEEEecH
Confidence 4556899999 59999999999999987 778888853
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=85.05 E-value=0.65 Score=39.15 Aligned_cols=37 Identities=16% Similarity=0.118 Sum_probs=29.3
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKK 68 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~ 68 (543)
.|.+|+|.|+.| +|...+..+...|. .+|++..++++
T Consensus 28 ~GdtVlV~GaGG-~G~~~~~~~~~~g~--~~Vi~~~~~~~ 64 (176)
T d2jhfa2 28 QGSTCAVFGLGG-VGLSVIMGCKAAGA--ARIIGVDINKD 64 (176)
T ss_dssp TTCEEEEECCSH-HHHHHHHHHHHTTC--SEEEEECSCGG
T ss_pred CCCEEEEECCCC-cHHHHHHHHHHcCC--ceEEeecCcHH
Confidence 578999999955 88888888887764 58888888754
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=85.05 E-value=0.43 Score=39.29 Aligned_cols=34 Identities=29% Similarity=0.442 Sum_probs=29.7
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEec
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMR 65 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R 65 (543)
.+||+|+|.|| |.+|..-++.|++.|- +|.++..
T Consensus 11 l~gkrvLViGg-G~va~~ka~~Ll~~GA---~VtVvap 44 (150)
T d1kyqa1 11 LKDKRILLIGG-GEVGLTRLYKLMPTGC---KLTLVSP 44 (150)
T ss_dssp CTTCEEEEEEE-SHHHHHHHHHHGGGTC---EEEEEEE
T ss_pred eCCCEEEEECC-CHHHHHHHHHHHHCCC---EEEEEeC
Confidence 68999999997 9999999999999986 6777653
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=84.63 E-value=0.42 Score=39.59 Aligned_cols=37 Identities=16% Similarity=0.315 Sum_probs=29.6
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
.|+|.|.|+||-||+..++-+.+. ++--+|.+++=.+
T Consensus 2 pK~I~IlGsTGSIG~~tL~Vi~~~-~d~f~v~~lsa~~ 38 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTLDLIERN-LDRYQVIALTANR 38 (150)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHT-GGGEEEEEEEESS
T ss_pred CcEEEEECCCcHHHHHHHHHHHcC-CCCcEEEEEEeCC
Confidence 589999999999999998876654 5544888887654
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=84.58 E-value=0.69 Score=36.59 Aligned_cols=36 Identities=14% Similarity=0.276 Sum_probs=31.3
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKK 68 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~ 68 (543)
.+++|+|.| .||+|-.+++.|.+.|. +|.++.|.+.
T Consensus 29 ~~~~vvIIG-gG~iG~E~A~~l~~~g~---~Vtli~~~~~ 64 (121)
T d1d7ya2 29 PQSRLLIVG-GGVIGLELAATARTAGV---HVSLVETQPR 64 (121)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTC---EEEEEESSSS
T ss_pred cCCeEEEEC-cchhHHHHHHHhhcccc---eEEEEeeccc
Confidence 368999999 59999999999999975 8899998864
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=83.96 E-value=0.78 Score=35.84 Aligned_cols=35 Identities=26% Similarity=0.432 Sum_probs=30.4
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKK 68 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~ 68 (543)
.++|+|.|| |++|-.++..|.+.|. +|.++.|...
T Consensus 22 p~~v~IiGg-G~ig~E~A~~l~~~G~---~Vtlve~~~~ 56 (117)
T d1ebda2 22 PKSLVVIGG-GYIGIELGTAYANFGT---KVTILEGAGE 56 (117)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESSSS
T ss_pred CCeEEEECC-Cccceeeeeeeccccc---EEEEEEecce
Confidence 379999995 9999999999999985 7888888764
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=83.74 E-value=0.57 Score=39.69 Aligned_cols=39 Identities=15% Similarity=0.036 Sum_probs=30.0
Q ss_pred hhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 26 KTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 26 ~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
+.-.|.+|+|.|+ |-+|...+.-+...|. ++|++..+++
T Consensus 24 ~~~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga--~~Vi~~d~~~ 62 (174)
T d1jqba2 24 DIEMGSSVVVIGI-GAVGLMGIAGAKLRGA--GRIIGVGSRP 62 (174)
T ss_dssp TCCTTCCEEEECC-SHHHHHHHHHHHTTTC--SCEEEECCCH
T ss_pred CCCCCCEEEEEcC-Ccchhhhhhhhhcccc--cccccccchh
Confidence 3446889999986 9999888877777765 4788887753
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=83.72 E-value=0.57 Score=38.77 Aligned_cols=38 Identities=18% Similarity=0.317 Sum_probs=30.0
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKK 68 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~ 68 (543)
+|+|.|.|+||-||+..++-+.+. |+--+|++|.=.+.
T Consensus 1 MK~I~IlGsTGSIG~~tL~Vi~~~-~d~f~v~~Lsa~~N 38 (151)
T d1q0qa2 1 MKQLTILGSTGSIGCSTLDVVRHN-PEHFRVVALVAGKN 38 (151)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHC-TTTEEEEEEEESSC
T ss_pred CCeEEEEcCCcHHHHHHHHHHHhC-CCCcEEEEEEecCc
Confidence 468999999999999998877554 65458988886543
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=83.62 E-value=0.31 Score=41.70 Aligned_cols=37 Identities=16% Similarity=0.300 Sum_probs=31.1
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKG 69 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~ 69 (543)
+.+|||+||+|-+|...++-....|. +|++.+|+++.
T Consensus 32 ~~~vlV~gasGGVG~~aiQlAk~~Ga---~Via~~~~~~k 68 (177)
T d1o89a2 32 DGEIVVTGASGGVGSTAVALLHKLGY---QVVAVSGREST 68 (177)
T ss_dssp GCEEEESSTTSHHHHHHHHHHHHTTC---CEEEEESCGGG
T ss_pred CCcEEEEEccccchHHHHHHHHHcCC---CeEEEecchhH
Confidence 45899999999999999988888875 78888887643
|
| >d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=83.59 E-value=0.68 Score=39.69 Aligned_cols=35 Identities=20% Similarity=0.373 Sum_probs=30.4
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
|+|+|.|| |++|-.++..|.+.+++. +|.++.|..
T Consensus 1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~-~V~v~~~~~ 35 (198)
T d1nhpa1 1 MKVIVLGS-SHGGYEAVEELLNLHPDA-EIQWYEKGD 35 (198)
T ss_dssp CEEEEECS-SHHHHHHHHHHHHHCTTS-EEEEEESSS
T ss_pred CEEEEECC-cHHHHHHHHHHHhcCCCC-eEEEEeCCC
Confidence 78999995 999999999999998876 788887764
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=82.91 E-value=1 Score=37.96 Aligned_cols=38 Identities=13% Similarity=0.039 Sum_probs=30.6
Q ss_pred hcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 27 TYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 27 ~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
.-.|.+|+|.| .|-+|...+..+...|. ++|++..++.
T Consensus 26 v~~G~~VlV~G-~G~iGl~a~~~ak~~Ga--~~Vi~~d~~~ 63 (174)
T d1e3ia2 26 VTPGSTCAVFG-LGCVGLSAIIGCKIAGA--SRIIAIDING 63 (174)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHHTTC--SEEEEECSCG
T ss_pred CCCCCEEEEEC-CChHHHHHHHHHHHhCC--ceeeeeccch
Confidence 34678999998 49999999988888875 4788887765
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=82.84 E-value=1.2 Score=37.13 Aligned_cols=36 Identities=14% Similarity=-0.034 Sum_probs=28.0
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
.|.+|+|.|++ -+|...+..+...|. +.|++..+++
T Consensus 28 ~G~tVlI~GaG-GvG~~aiq~ak~~G~--~~vi~~~~~~ 63 (176)
T d2fzwa2 28 PGSVCAVFGLG-GVGLAVIMGCKVAGA--SRIIGVDINK 63 (176)
T ss_dssp TTCEEEEECCS-HHHHHHHHHHHHHTC--SEEEEECSCG
T ss_pred CCCEEEEecch-hHHHHHHHHHHHHhc--CceEEEcccH
Confidence 57899999985 589888888888865 4777777654
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=82.65 E-value=1.6 Score=37.29 Aligned_cols=38 Identities=11% Similarity=0.189 Sum_probs=31.8
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKG 69 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~ 69 (543)
..+++|.|.| .|-||+.+++.|..-|. +|....|....
T Consensus 42 l~~~~vgiiG-~G~IG~~va~~l~~fg~---~v~~~d~~~~~ 79 (188)
T d2naca1 42 LEAMHVGTVA-AGRIGLAVLRRLAPFDV---HLHYTDRHRLP 79 (188)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHGGGTC---EEEEECSSCCC
T ss_pred ccccceeecc-ccccchhhhhhhhccCc---eEEEEeecccc
Confidence 4689999999 79999999999988765 78888887543
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=82.55 E-value=0.97 Score=35.71 Aligned_cols=36 Identities=19% Similarity=0.361 Sum_probs=30.7
Q ss_pred CCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCC
Q psy7538 29 ENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKK 68 (543)
Q Consensus 29 ~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~ 68 (543)
++++|.|.| .||+|-.+++.|.+.|. +|.++.|.+.
T Consensus 29 ~~k~vvViG-gG~iG~E~A~~l~~~g~---~Vtlie~~~~ 64 (123)
T d1nhpa2 29 EVNNVVVIG-SGYIGIEAAEAFAKAGK---KVTVIDILDR 64 (123)
T ss_dssp TCCEEEEEC-CSHHHHHHHHHHHHTTC---EEEEEESSSS
T ss_pred CCCEEEEEC-ChHHHHHHHHHhhccce---EEEEEEecCc
Confidence 468999998 59999999999999986 7888888753
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=81.98 E-value=3.6 Score=30.31 Aligned_cols=73 Identities=11% Similarity=0.001 Sum_probs=45.0
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEccCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISGDITQ 109 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~gDl~~ 109 (543)
+|+|.+.|-.|-==+.|++-|++.|+ .|..-++... ...++|++ .++.+..|.-.
T Consensus 1 ~~~ihfiGIgG~GMs~LA~~L~~~G~---~VsGSD~~~~--~~t~~L~~-------------------~Gi~i~~gh~~- 55 (89)
T d1j6ua1 1 HMKIHFVGIGGIGMSAVALHEFSNGN---DVYGSNIEET--ERTAYLRK-------------------LGIPIFVPHSA- 55 (89)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEECSSCC--HHHHHHHH-------------------TTCCEESSCCT-
T ss_pred CcEEEEEeECHHHHHHHHHHHHhCCC---eEEEEeCCCC--hhHHHHHH-------------------CCCeEEeeecc-
Confidence 47888988655333578899999997 7777776642 22233432 24444444211
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCccCCC
Q psy7538 110 LKLGISEIDKKELIDNVDIVYHVAATIRF 138 (543)
Q Consensus 110 ~~lgls~~~~~~l~~~vd~ViH~AA~v~~ 138 (543)
. .++++|.|+...|....
T Consensus 56 ~-----------~i~~~d~vV~SsAI~~~ 73 (89)
T d1j6ua1 56 D-----------NWYDPDLVIKTPAVRDD 73 (89)
T ss_dssp T-----------SCCCCSEEEECTTCCTT
T ss_pred c-----------ccCCCCEEEEecCcCCC
Confidence 1 12578999999887543
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.94 E-value=1 Score=37.71 Aligned_cols=37 Identities=11% Similarity=0.182 Sum_probs=29.9
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
-.|.+|+|.|+ |-+|...+.-+...|. ++|++..+.+
T Consensus 25 ~~gd~VlI~G~-G~iG~~~~~~a~~~G~--~~Vi~~d~~~ 61 (171)
T d1pl8a2 25 TLGHKVLVCGA-GPIGMVTLLVAKAMGA--AQVVVTDLSA 61 (171)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEEESCH
T ss_pred CCCCEEEEECC-CccHHHHHHHHHHcCC--ceEEeccCCH
Confidence 45789999986 9999999888877765 5788888764
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=81.32 E-value=0.83 Score=37.53 Aligned_cols=34 Identities=18% Similarity=0.439 Sum_probs=29.4
Q ss_pred CEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCC
Q psy7538 31 KSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTK 67 (543)
Q Consensus 31 ~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~ 67 (543)
|+|.+.|+ |-+|+++++.|++.|+ .+|++..|++
T Consensus 1 MkI~fIG~-G~MG~ai~~~l~~~~~--~~i~v~~r~~ 34 (152)
T d1yqga2 1 MNVYFLGG-GNMAAAVAGGLVKQGG--YRIYIANRGA 34 (152)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHCS--CEEEEECSSH
T ss_pred CEEEEEcC-cHHHHHHHHHHHHCCC--CcEEEEeCCh
Confidence 68999985 9999999999999985 3899988874
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=80.98 E-value=2 Score=36.71 Aligned_cols=37 Identities=19% Similarity=0.333 Sum_probs=30.3
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKK 68 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~ 68 (543)
.+|++|.|.| .|-||+.+++.|..-|. +|....+...
T Consensus 45 l~g~tvgIiG-~G~IG~~va~~l~~fg~---~v~~~d~~~~ 81 (191)
T d1gdha1 45 LDNKTLGIYG-FGSIGQALAKRAQGFDM---DIDYFDTHRA 81 (191)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHTTTC---EEEEECSSCC
T ss_pred ecccceEEee-cccchHHHHHHHHhhcc---cccccccccc
Confidence 4689999999 79999999998887765 6777776554
|
| >d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Maltose-6'-phosphate glucosidase GlvA species: Bacillus subtilis [TaxId: 1423]
Probab=80.68 E-value=2.9 Score=34.86 Aligned_cols=86 Identities=20% Similarity=0.276 Sum_probs=45.7
Q ss_pred CCCEEEEEcCcchhHH-HHHHHHHhhCCC--cCEEEEEecCCCCCCHHHHHHHHhcCchhHHHHhhcCcCCCCceEEEEc
Q psy7538 29 ENKSIFLSGGSGFLGK-VLIEKILRLEPN--VKKIYLLMRTKKGKTPNQRVEELFESPVFDALKTLRGKSILQKIQVISG 105 (543)
Q Consensus 29 ~~~~VlITGatGFiG~-~Lv~~Ll~~g~~--v~~V~~l~R~~~~~~~~~rl~~~~~~~~f~~l~~~~~~~~~~~v~~i~g 105 (543)
+..+|.|.|| |-+|. .++..|++.-++ +.+|.+.+..+ +|++..- ...+...... .........
T Consensus 2 k~~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Did~------~~~~~~~--~~~~~~~~~~----~~~~~~~~~ 68 (167)
T d1u8xx1 2 KSFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDK------ERQDRIA--GACDVFIREK----APDIEFAAT 68 (167)
T ss_dssp CCEEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSCH------HHHHHHH--HHHHHHHHHH----CTTSEEEEE
T ss_pred CCceEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcCCh------hHHHHHH--HHHHHHHHHh----CCCcceEec
Confidence 3457999998 44554 455666654343 35788887654 3433110 0111111111 111222211
Q ss_pred cCCCCCCCCCHHHHHHHhcCccEEEEcCccCCC
Q psy7538 106 DITQLKLGISEIDKKELIDNVDIVYHVAATIRF 138 (543)
Q Consensus 106 Dl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~ 138 (543)
.|..+.++++|+|+.+|+..+.
T Consensus 69 -----------~d~~eal~~AD~Vvitag~~~~ 90 (167)
T d1u8xx1 69 -----------TDPEEAFTDVDFVMAHIRVGKY 90 (167)
T ss_dssp -----------SCHHHHHSSCSEEEECCCTTHH
T ss_pred -----------CChhhccCCCCEEEECCCcCCC
Confidence 1466778999999999987543
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=80.43 E-value=1 Score=35.46 Aligned_cols=35 Identities=23% Similarity=0.405 Sum_probs=30.3
Q ss_pred CCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCC
Q psy7538 30 NKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKK 68 (543)
Q Consensus 30 ~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~ 68 (543)
+++|+|.|| |++|-.++..|.+.|. +|.++.|.+.
T Consensus 32 ~~~vvIiGg-G~iG~E~A~~l~~~g~---~Vtlv~~~~~ 66 (122)
T d1xhca2 32 SGEAIIIGG-GFIGLELAGNLAEAGY---HVKLIHRGAM 66 (122)
T ss_dssp HSEEEEEEC-SHHHHHHHHHHHHTTC---EEEEECSSSC
T ss_pred CCcEEEECC-cHHHHHHHHHhhcccc---eEEEEecccc
Confidence 589999995 9999999999999986 7888888764
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=80.30 E-value=2.5 Score=36.38 Aligned_cols=37 Identities=16% Similarity=0.254 Sum_probs=30.6
Q ss_pred cCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCC
Q psy7538 28 YENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKK 68 (543)
Q Consensus 28 ~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~ 68 (543)
..||+|.|.| .|-||+.+++.|..-|. +|++..|...
T Consensus 43 l~~ktvgIiG-~G~IG~~va~~l~~fg~---~v~~~d~~~~ 79 (199)
T d1dxya1 43 LGQQTVGVMG-TGHIGQVAIKLFKGFGA---KVIAYDPYPM 79 (199)
T ss_dssp GGGSEEEEEC-CSHHHHHHHHHHHHTTC---EEEEECSSCC
T ss_pred ccceeeeeee-cccccccccccccccce---eeeccCCccc
Confidence 4679999999 79999999999987764 7888877653
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=80.24 E-value=2.6 Score=33.99 Aligned_cols=40 Identities=20% Similarity=0.273 Sum_probs=32.5
Q ss_pred chhhhhc-CCCEEEEEcCc---chhHHHHHHHHHhhCCCcCEEEEEe
Q psy7538 22 DRIAKTY-ENKSIFLSGGS---GFLGKVLIEKILRLEPNVKKIYLLM 64 (543)
Q Consensus 22 ~~i~~~~-~~~~VlITGat---GFiG~~Lv~~Ll~~g~~v~~V~~l~ 64 (543)
.++.+.+ +.|+|.|.||| |-.|..+++.|++.|+ +|+.+.
T Consensus 10 ~~i~~~L~~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~---~v~pVn 53 (139)
T d2d59a1 10 EDIREILTRYKKIALVGASPKPERDANIVMKYLLEHGY---DVYPVN 53 (139)
T ss_dssp HHHHHHHHHCCEEEEETCCSCTTSHHHHHHHHHHHTTC---EEEEEC
T ss_pred HHHHHHHhcCCeEEEEeecCCCCCchHHHHHHHHHCCC---EEEEEC
Confidence 4466655 78999999998 7899999999999987 676554
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=80.03 E-value=2.8 Score=37.11 Aligned_cols=123 Identities=14% Similarity=0.130 Sum_probs=67.8
Q ss_pred hhhhcCCCEEEEEcCcchhHHHHHHHHHhhCCCcCEEEEEecCCCCCCHHHHH-----HHHhc---CchhHHHHhhcCcC
Q psy7538 24 IAKTYENKSIFLSGGSGFLGKVLIEKILRLEPNVKKIYLLMRTKKGKTPNQRV-----EELFE---SPVFDALKTLRGKS 95 (543)
Q Consensus 24 i~~~~~~~~VlITGatGFiG~~Lv~~Ll~~g~~v~~V~~l~R~~~~~~~~~rl-----~~~~~---~~~f~~l~~~~~~~ 95 (543)
-++-.++++|+|.| .|-+|++++..|.+.| |+++.+++...-..+-..|- +++=+ ..+-++|++.+ |.
T Consensus 24 ~Q~kL~~~~VliiG-~GglGs~va~~La~~G--vg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~n-p~ 99 (247)
T d1jw9b_ 24 GQEALKDSRVLIVG-LGGLGCAASQYLASAG--VGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRIN-PH 99 (247)
T ss_dssp HHHHHHHCEEEEEC-CSHHHHHHHHHHHHHT--CSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHC-TT
T ss_pred HHHHHhCCCEEEEC-CCHHHHHHHHHHHHcC--CCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhh-cc
Confidence 34567789999999 5779999999999996 57888876543221111110 00000 00122233333 22
Q ss_pred CCCceEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCccCCCcccHHHHHHHHHHHHHHHHHHHHhccCCceEEEEecC
Q psy7538 96 ILQKIQVISGDITQLKLGISEIDKKELIDNVDIVYHVAATIRFDEPIKTAVILNTRGTRDMLELSKQMKNLKCFTYISTA 175 (543)
Q Consensus 96 ~~~~v~~i~gDl~~~~lgls~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~l~~~V~vST~ 175 (543)
-++..+...+. .+.........|+|+-+... ... ...+-++|.+. ++ .+|+.+..
T Consensus 100 --~~i~~~~~~~~-------~~~~~~~~~~~divid~~d~------~~~--------~~~in~~~~~~-~i-p~i~g~~~ 154 (247)
T d1jw9b_ 100 --IAITPVNALLD-------DAELAALIAEHDLVLDCTDN------VAV--------RNQLNAGCFAA-KV-PLVSGAAI 154 (247)
T ss_dssp --SEEEEECSCCC-------HHHHHHHHHTSSEEEECCSS------HHH--------HHHHHHHHHHH-TC-CEEEEEEE
T ss_pred --cchhhhhhhhh-------hccccccccccceeeeccch------hhh--------hhhHHHHHHHh-CC-Cccccccc
Confidence 24444433332 34566777889999976532 111 12345567776 43 56665554
|