Psyllid ID: psy7709

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330------
Protein Sequence
MASDREVLREVWDGKLPVCFTLLADQVSTVGEPDPSYLMVPRYVWILLDREVLREVWDGKLPVCFTLLADQVSTVGEPDPSYLMVPRLSYFPLVLEKSYPFVGIGTTHVQHCFTSVIHHAIVNKHPARNFFLSRTEALSQSSGRHYPIGLLYDLHVTDNQLPWNITVHFDKFPANEILHCPSREAVESHFMSCIKEADVLKHRSQIVSNMQKKEHNQLWLGLQNDKFDQFWVINKKLMEPGEGGGFKHIPFRCYQGDLPFSQCLVKPITNEGNPKTLQNLFEEVYPKISIDKCKLNGILVILVHGIAIPLDTPLQWMSEHLSYPDNFLHIVVNVNS
Secondary Structure (PSIPRED)
cccHHHHHHHHHcccccEEEEEcccccccccccccccccccccccccccHHHHHHHHcccccEEEEEEccccccccccccEEEEccccccHHHHHHHHHHccccccccccccccHHHHHHHHccccccccccccccccccccccccccEEEEEEccccccccEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHcccHHHHcccHHHHHHHHHHHHHccHHHHHHHHHHcccccccccccEEEEEEEccccccEEccccccccccccccHHHHHHHHcccccccccccccEEEEEEEcccccccccHHHHHHHccccccEEEEEEEEcc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHcccccEEEEEEccccccccccccHHHHccHHEEEEEcHHHHHHHHcccccEEEEEcccccccccccccEEEEEccHHHHHHHHHHHHHHHHHHccccccccccEEEccccccccccEEEEEccccccHcHHccccEEEEEEcccccccccEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHccccEEccccHHHHHHHHHHHHHccHHHHHHHHHHHccccccccccEEEEEEEEcccccEEEcccccccccccccHHHHHHHHccccccccccccccEEEEEEccccccccHHHHHHHHHcccccEEEEEEEEcc
Coil and Loop (DISEMBL)
MASDREVLREVWDGKLPVCFTLLADqvstvgepdpsylmvPRYVWILLDREVlrevwdgklPVCFTLLADqvstvgepdpsylmvprlsyfplvleksypfvgigtthvQHCFTSVIHHAivnkhparnffLSRTEAlsqssgrhypigllydlhvtdnqlpwnitvhfdkfpaneilhcpsreaVESHFMSCIKEADVLKHRSQIVSNMQKKEHNQLWLGLQNDKFDQFWVINKklmepgegggfkhipfrcyqgdlpfsqclvkpitnegnpktLQNLFEEvypkisidkcklNGILVILVHgiaipldtplqwmsehlsypdnfLHIVVNVNS
Flexible Loop (DISEMBL)
masdrevlrevwdgklpVCFTLLADQvstvgepdpsylMVPRYVWILLDREVLREVWDGKLPVCFTLLADQVSTVGEPDPSYLMVPRLSYFPLVLEKSYPFVGIGTTHVQHCFTSVIHHAIVNKHPARNFFLSRTEALSQSSGRHYPIGLLYDLHVTDNQLPWNITVHFDKFPANEILHCPSREAVESHFMSCIKEADVLKHRSQIVSNMQKKEHNQLWLGLQNDKFDQFWVINKKLMEPGEGGGFKHIPFRCYQGDLPFSQCLVKPITNEGNPKTLQNLFEEVYPKISIDKCKLNGILVILVHGIAIPLDTPLQWMSEHLSYPDNFLHIVVNVNS
Low Complexity Region (SEG)
MASDREVLREVWDGKLPVCFTLLADQVSTVGEPDPSYLMVPRYVWILLDREVLREVWDGKLPVCFTLLADQVSTVGEPDPSYLMVPRLSYFPLVLEKSYPFVGIGTTHVQHCFTSVIHHAIVNKHPARNFFLSRTEALSQSSGRHYPIGLLYDLHVTDNQLPWNITVHFDKFPANEILHCPSREAVESHFMSCIKEADVLKHRSQIVSNMQKKEHNQLWLGLQNDKFDQFWVINKKLMEPGEGGGFKHIPFRCYQGDLPFSQCLVKPITNEGNPKTLQNLFEEVYPKISIDKCKLNGILVILVHGIAIPLDTPLQWMSEHLSYPDNFLHIVVNVNS
Disordered region (IsUnstruct)
******VLREVWDGKLPVCFTLLADQVSTVGEPDPSYLMVPRYVWILLDREVLREVWDGKLPVCFTLLADQVSTVGEPDPSYLMVPRLSYFPLVLEKSYPFVGIGTTHVQHCFTSVIHHAIVNKHPARNFFLSRTEALSQSSGRHYPIGLLYDLHVTDNQLPWNITVHFDKFPANEILHCPSREAVESHFMSCIKEADVLKHRSQIVSNMQKKEHNQLWLGLQNDKFDQFWVINKKLMEPGEGGGFKHIPFRCYQGDLPFSQCLVKPITNEGNPKTLQNLFEEVYPKISIDKCKLNGILVILVHGIAIPLDTPLQWMSEHLSYPDNFLHIVVNV**
Disordered Region (DISOPRED)
****REV*REVWDGKLPVCFTLLADQVSTVGEPDPSYLMVPRYVWILLDREVLREVWDGKLPVCFTLLADQVSTVGEPDPSYLMVPRLSYFPLVLEKSYPFVGIGTTHVQHCFTSVIHHAIVNKHPARNFFLSRTEALSQSSGRHYPIGLLYDLHVTDNQLPWNITVHFDKFPANEILHCPSREAVESHFMSCIKEADVLKHRSQ***********QLWLGLQNDKFDQFWVINK**********FKHIPFRCYQGDLPFSQCLVKP*T*EGNPKTLQNLFEEVYPKISIDKCKLNGILVILVHGIAIPLDTPLQWMSEHLSYPDNFLHIVVNVNS
Disordered Region (DISEMBL)
********REVWDGKLPVCFTLLADQVSTVGEPDPSYLMVPRYVWILLDREVLREVWDGKLPVCFTLLADQVSTVGEPDPSYLMVPRLSYFPLVLEKSYPFVGIGTTHVQHCFTSVIHHAIVNKHPARNFFLSRTEALSQSSGRHYPIGLLYDLHVTDNQLPWNITVHFDKFPANEILHCPSREAVESHFMSCIKEADVLKHRSQIVSNMQKKEHNQLWLGLQNDKFDQFWVINKKLMEPGEGGGFKHIPFRCYQGDLPFSQCLVKPITNEGNPKTLQNLFEEVYPKISIDKCKLNGILVILVHGIAIPLDTPLQWMSEHLSYPDNFLHIVVNVNS
Disordered Region (DISPRO)
*****EVLREVWDGKLPVCFTLLADQVSTVGEPDPSYLMVPRYVWILLDREVLREVWDGKLPVCFTLLADQVSTVGEPDPSYLMVPRLSYFPLVLEKSYPFVGIGTTHVQHCFTSVIHHAIVNKHPARNFFLSRTEALSQSSGRHYPIGLLYDLHVTDNQLPWNITVHFDKFPANEILHCPSREAVESHFMSCIKEADVLKHRSQIVSNMQKKEHNQLWLGLQNDKFDQFWVINKKLMEPGEGGGFKHIPFRCYQGDLPFSQCLVKPITNEGNPKTLQNLFEEVYPKISIDKCKLNGILVILVHGIAIPLDTPLQWMSEHLSYPDNFLHIVVNVNS
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASDREVLREVWDGKLPVCFTLLADQVSTVGEPDPSYLMVPRYVWILLDREVLREVWDGKLPVCFTLLADQVSTVGEPDPSYLMVPRLSYFPLVLEKSYPFVGIGTTHVQHCFTSVIHHAIVNKHPARNFFLSRTEALSQSSGRHYPIGLLYDLHVTDNQLPWNITVHFDKFPANEILHCPSREAVESHFMSCIKEADVLKHRSQIVSNMQKKEHNQLWLGLQNDKFDQFWVINKKLMEPGEGGGFKHIPFRCYQGDLPFSQCLVKPITNEGNPKTLQNLFEEVYPKISIDKCKLNGILVILVHGIAIPLDTPLQWMSEHLSYPDNFLHIVVNVNS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	336	2.2.26 [Sep-21-2011]
Q9H1Y0	275	Autophagy protein 5 OS=Ho	yes	N/A	0.782	0.956	0.491	4e-73
Q5R792	275	Autophagy protein 5 OS=Po	yes	N/A	0.782	0.956	0.487	8e-73
Q3MQ24	275	Autophagy protein 5 OS=Bo	yes	N/A	0.776	0.949	0.487	2e-72
Q99J83	275	Autophagy protein 5 OS=Mu	yes	N/A	0.782	0.956	0.491	6e-72
Q3MQ06	275	Autophagy protein 5 OS=Ra	yes	N/A	0.782	0.956	0.484	4e-71
Q3MQ04	275	Autophagy protein 5 OS=Su	yes	N/A	0.782	0.956	0.473	4e-70
Q9W3R7	269	Autophagy protein 5 OS=Dr	yes	N/A	0.764	0.955	0.455	7e-61
Q0UXN8	311	Autophagy protein 5 OS=Ph	N/A	N/A	0.782	0.845	0.256	1e-18
A1DMA1	326	Autophagy protein 5 OS=Ne	N/A	N/A	0.782	0.806	0.256	5e-18
Q4WNA5	326	Autophagy protein 5 OS=Ne	yes	N/A	0.782	0.806	0.247	2e-17

>sp|Q9H1Y0|ATG5_HUMAN Autophagy protein 5 OS=Homo sapiens GN=ATG5 PE=1 SV=2

 Score =  275 bits (702), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 141/287 (49%), Positives = 192/287 (66%), Gaps = 24/287 (8%)

Query: 49  DREVLREVWDGKLPVCFTLLADQVSTVGEPDPSYLMVPRLSYFPLVLEKSYPFVGIGTTH 108
           D++VLR+VW G++P CFTL  D++ T  E +P YL++PR+SY  LV +K           
Sbjct: 4   DKDVLRDVWFGRIPTCFTLYQDEI-TEREAEPYYLLLPRVSYLTLVTDK----------- 51

Query: 109 VQHCFTSVIHHAIVNKHPARNFFLSRTEALSQSSGRHYPIGLLYDLHVTDNQLPWNITVH 168
           V+  F  V+    +++     +F      L      HYPIGLL+DL  + + LPWNITVH
Sbjct: 52  VKKHFQKVMRQEDISE----IWFEYEGTPLKW----HYPIGLLFDLLASSSALPWNITVH 103

Query: 169 FDKFPANEILHCPSREAVESHFMSCIKEADVLKHRSQIVSNMQKKEHNQLWLGLQNDKFD 228
           F  FP  ++LHCPS++A+E+HFMSC+KEAD LKH+SQ+++ MQKK+H QLW+GLQND+FD
Sbjct: 104 FKSFPEKDLLHCPSKDAIEAHFMSCMKEADALKHKSQVINEMQKKDHKQLWMGLQNDRFD 163

Query: 229 QFWVINKKLME-PGEGGGFKHIPFRCYQ--GDLPFSQCLVKPITNEGNPKTLQNLFEEVY 285
           QFW IN+KLME P E  GF++IPFR YQ   + PF Q L +P+  +G   TL +L +EV 
Sbjct: 164 QFWAINRKLMEYPAEENGFRYIPFRIYQTTTERPFIQKLFRPVAADGQLHTLGDLLKEVC 223

Query: 286 PKISIDKCKLNGILVILVHGIAIPLDTPLQWMSEHLSYPDNFLHIVV 332
           P  +ID         +++HGI   L+TPLQW+SEHLSYPDNFLHI +
Sbjct: 224 PS-AIDPEDGEKKNQVMIHGIEPMLETPLQWLSEHLSYPDNFLHISI 269

May play an important role in the apoptotic process, possibly within the modified cytoskeleton. Its expression is a relatively late event in the apoptotic process, occurring downstream of caspase activity.
Homo sapiens (taxid: 9606)

>sp|Q5R792|ATG5_PONAB Autophagy protein 5 OS=Pongo abelii GN=ATG5 PE=2 SV=1

 Score =  274 bits (700), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 140/287 (48%), Positives = 192/287 (66%), Gaps = 24/287 (8%)

Query: 49  DREVLREVWDGKLPVCFTLLADQVSTVGEPDPSYLMVPRLSYFPLVLEKSYPFVGIGTTH 108
           D++VLR+VW G++P CFTL  D++ T  E +P YL++PR+SY  LV +K           
Sbjct: 4   DKDVLRDVWFGRIPTCFTLCQDEI-TEREAEPYYLLLPRVSYLTLVTDK----------- 51

Query: 109 VQHCFTSVIHHAIVNKHPARNFFLSRTEALSQSSGRHYPIGLLYDLHVTDNQLPWNITVH 168
           V+  F  V+    +++     +F      L      HYPIGLL+DL  + + LPWNITVH
Sbjct: 52  VKKHFQKVMRQEDISE----IWFEYEGTPLKW----HYPIGLLFDLLASSSALPWNITVH 103

Query: 169 FDKFPANEILHCPSREAVESHFMSCIKEADVLKHRSQIVSNMQKKEHNQLWLGLQNDKFD 228
           F  FP  ++LHCPS++A+E+HFMSC+KEAD LKH+SQ+++ MQKK+H QLW+GLQND+FD
Sbjct: 104 FKSFPEKDLLHCPSKDAIEAHFMSCMKEADALKHKSQVINEMQKKDHKQLWMGLQNDRFD 163

Query: 229 QFWVINKKLME-PGEGGGFKHIPFRCYQ--GDLPFSQCLVKPITNEGNPKTLQNLFEEVY 285
           QFW IN+KLME P E  GF++IPFR YQ   + PF Q L +P+  +G   TL +L +EV 
Sbjct: 164 QFWAINRKLMEYPAEENGFRYIPFRIYQTTTERPFIQKLFRPVAADGQLHTLGDLLKEVC 223

Query: 286 PKISIDKCKLNGILVILVHGIAIPLDTPLQWMSEHLSYPDNFLHIVV 332
           P  ++D         +++HGI   L+TPLQW+SEHLSYPDNFLHI +
Sbjct: 224 PS-AVDPEDGEKKNQVMIHGIEPMLETPLQWLSEHLSYPDNFLHISI 269

Required for autophagy. Conjugates to ATG12 and associates with isolation membrane to form cup-shaped isolation membrane and autophagosome. The conjugate detaches from the membrane immediately before or after autophagosome formation is completed.

Pongo abelii (taxid: 9601)

>sp|Q3MQ24|ATG5_BOVIN Autophagy protein 5 OS=Bos taurus GN=ATG5 PE=2 SV=2

 Score =  273 bits (697), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 141/289 (48%), Positives = 192/289 (66%), Gaps = 28/289 (9%)

Query: 49  DREVLREVWDGKLPVCFTLLADQVSTVGEPDPSYLMVPRLSYFPLVLEKSYPFVGIGTTH 108
           D++VLR+VW G++P CFTL  D++ T  E +P YL++PR+SY  LV +K           
Sbjct: 4   DKDVLRDVWFGRIPTCFTLYQDEI-TEREAEPYYLLLPRVSYLTLVTDK----------- 51

Query: 109 VQHCFTSVIHHAIVNKHPARNFFLSRTEALSQSSGRHYPIGLLYDLHVTDNQLPWNITVH 168
           V+  F  V+    +++     +F      L      HYPIGLL+DL  + + LPWNITVH
Sbjct: 52  VKKHFQKVMRQEDISE----IWFEYEGTPLKW----HYPIGLLFDLLASSSALPWNITVH 103

Query: 169 FDKFPANEILHCPSREAVESHFMSCIKEADVLKHRSQIVSNMQKKEHNQLWLGLQNDKFD 228
           F  FP  ++LHCPS++ +E+HFMSC+KEAD LKH+SQ+++ MQKK+H QLW+GLQND+FD
Sbjct: 104 FKSFPEKDLLHCPSKDVIEAHFMSCVKEADALKHKSQVINEMQKKDHKQLWMGLQNDRFD 163

Query: 229 QFWVINKKLME-PGEGGGFKHIPFRCYQ--GDLPFSQCLVKPITNEGNPKTLQNLFEEVY 285
           QFW IN+KLME P E  GF++IPFR YQ   + PF Q L +P++ +G   TL +L +EV 
Sbjct: 164 QFWAINRKLMEYPAEENGFRYIPFRIYQTTTERPFIQKLFRPVSTDGQLHTLGDLLKEVC 223

Query: 286 PKISI--DKCKLNGILVILVHGIAIPLDTPLQWMSEHLSYPDNFLHIVV 332
           P      D  K N    +++HGI   L+TPLQW+SEHLSYPDNFLHI +
Sbjct: 224 PSAVAPEDGEKKNQ---VMIHGIEPMLETPLQWLSEHLSYPDNFLHISI 269

Required for autophagy. Conjugates to ATG12 and associates with isolation membrane to form cup-shaped isolation membrane and autophagosome. The conjugate detaches from the membrane immediately before or after autophagosome formation is completed.

Bos taurus (taxid: 9913)

>sp|Q99J83|ATG5_MOUSE Autophagy protein 5 OS=Mus musculus GN=Atg5 PE=1 SV=1

 Score =  271 bits (693), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 141/287 (49%), Positives = 190/287 (66%), Gaps = 24/287 (8%)

Query: 49  DREVLREVWDGKLPVCFTLLADQVSTVGEPDPSYLMVPRLSYFPLVLEKSYPFVGIGTTH 108
           D++VLR+VW G++P CFTL  D++ T  E +P YL++PR+SY  LV +K           
Sbjct: 4   DKDVLRDVWFGRIPTCFTLYQDEI-TEREAEPYYLLLPRVSYLTLVTDK----------- 51

Query: 109 VQHCFTSVIHHAIVNKHPARNFFLSRTEALSQSSGRHYPIGLLYDLHVTDNQLPWNITVH 168
           V+  F  V+    V++     +F      L      HYPIGLL+DL  + + LPWNITVH
Sbjct: 52  VKKHFQKVMRQEDVSE----IWFEYEGTPLKW----HYPIGLLFDLLASSSALPWNITVH 103

Query: 169 FDKFPANEILHCPSREAVESHFMSCIKEADVLKHRSQIVSNMQKKEHNQLWLGLQNDKFD 228
           F  FP  ++LHCPS++AVE+HFMSC+KEAD LKH+SQ+++ MQKK+H QLW+GLQND+FD
Sbjct: 104 FKSFPEKDLLHCPSKDAVEAHFMSCMKEADALKHKSQVINEMQKKDHKQLWMGLQNDRFD 163

Query: 229 QFWVINKKLME-PGEGGGFKHIPFRCYQ--GDLPFSQCLVKPITNEGNPKTLQNLFEEVY 285
           QFW IN+KLME P E  GF++IPFR YQ   + PF Q L +P+  +G   TL +L  EV 
Sbjct: 164 QFWAINRKLMEYPPEENGFRYIPFRIYQTTTERPFIQKLFRPVAADGQLHTLGDLLREVC 223

Query: 286 PKISIDKCKLNGILVILVHGIAIPLDTPLQWMSEHLSYPDNFLHIVV 332
           P  ++          +++HGI   L+TPLQW+SEHLSYPDNFLHI +
Sbjct: 224 PS-AVAPEDGEKRSQVMIHGIEPMLETPLQWLSEHLSYPDNFLHISI 269

Required for autophagy. Conjugates to ATG12 and associates with isolation membrane to form cup-shaped isolation membrane and autophagosome. The conjugate detaches from the membrane immediately before or after autophagosome formation is completed.

Mus musculus (taxid: 10090)

>sp|Q3MQ06|ATG5_RAT Autophagy protein 5 OS=Rattus norvegicus GN=Atg5 PE=2 SV=1

 Score =  268 bits (685), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 139/287 (48%), Positives = 189/287 (65%), Gaps = 24/287 (8%)

Query: 49  DREVLREVWDGKLPVCFTLLADQVSTVGEPDPSYLMVPRLSYFPLVLEKSYPFVGIGTTH 108
           D++VLR+VW G++P CFTL  D++ T  E +P YL++PR+SY  LV +K           
Sbjct: 4   DKDVLRDVWFGRIPTCFTLYQDEI-TEREAEPYYLLLPRVSYLTLVTDK----------- 51

Query: 109 VQHCFTSVIHHAIVNKHPARNFFLSRTEALSQSSGRHYPIGLLYDLHVTDNQLPWNITVH 168
           V+  F  V+    V++     +F      L      HYPIGLL+DL  + + LPWNITVH
Sbjct: 52  VKKHFQKVMRQEDVSE----IWFEYEGTPLKW----HYPIGLLFDLLASSSALPWNITVH 103

Query: 169 FDKFPANEILHCPSREAVESHFMSCIKEADVLKHRSQIVSNMQKKEHNQLWLGLQNDKFD 228
           F  FP  ++LHCP ++AVE+HFMSC+KEAD LKH+SQ+++ MQ+K+H QLW+GLQND+FD
Sbjct: 104 FKSFPEKDLLHCPCKDAVEAHFMSCVKEADALKHKSQVINEMQRKDHKQLWMGLQNDRFD 163

Query: 229 QFWVINKKLME-PGEGGGFKHIPFRCYQ--GDLPFSQCLVKPITNEGNPKTLQNLFEEVY 285
           QFW IN+KLME P E  GF++IPFR YQ   + PF Q L +P+  +G   TL +L  EV 
Sbjct: 164 QFWTINRKLMEYPPEENGFRYIPFRIYQTTTERPFIQKLFRPVAADGQLHTLGDLLREVC 223

Query: 286 PKISIDKCKLNGILVILVHGIAIPLDTPLQWMSEHLSYPDNFLHIVV 332
           P  ++          +++HGI   L+TPLQW+SEHLSYPDNFLHI +
Sbjct: 224 PS-AVAPEDGEKKSQVMIHGIEPLLETPLQWLSEHLSYPDNFLHISI 269

Required for autophagy. Conjugates to ATG12 and associates with isolation membrane to form cup-shaped isolation membrane and autophagosome. The conjugate detaches from the membrane immediately before or after autophagosome formation is completed.

Rattus norvegicus (taxid: 10116)

>sp|Q3MQ04|ATG5_PIG Autophagy protein 5 OS=Sus scrofa GN=ATG5 PE=2 SV=1

 Score =  265 bits (677), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 136/287 (47%), Positives = 190/287 (66%), Gaps = 24/287 (8%)

Query: 49  DREVLREVWDGKLPVCFTLLADQVSTVGEPDPSYLMVPRLSYFPLVLEKSYPFVGIGTTH 108
           D++VLR+VW G++P CFTL  D++ T  E +P YL++PR+SY  LV +K           
Sbjct: 4   DKDVLRDVWFGRIPTCFTLYQDEI-TEREAEPYYLLLPRVSYLTLVTDK----------- 51

Query: 109 VQHCFTSVIHHAIVNKHPARNFFLSRTEALSQSSGRHYPIGLLYDLHVTDNQLPWNITVH 168
           V+  F  V+    +++     +F      L      HYPIGLL+DL  + + LPWNITVH
Sbjct: 52  VKKHFQKVMRQEDISE----IWFEYEGTPLKW----HYPIGLLFDLLASISALPWNITVH 103

Query: 169 FDKFPANEILHCPSREAVESHFMSCIKEADVLKHRSQIVSNMQKKEHNQLWLGLQNDKFD 228
           F  FP  ++LHCPS++ +E+HFMSC+KEAD LKH+S+++S+MQ+K+H QLW+GLQND+FD
Sbjct: 104 FKSFPEKDLLHCPSKDVIEAHFMSCVKEADALKHKSRVISDMQRKDHKQLWMGLQNDRFD 163

Query: 229 QFWVINKKLME-PGEGGGFKHIPFRCYQ--GDLPFSQCLVKPITNEGNPKTLQNLFEEVY 285
           QFW IN+KL+E P E  GF++IPFR YQ   + PF Q L +P+  +G   TL +L  EV 
Sbjct: 164 QFWTINRKLIEYPPEENGFRYIPFRIYQTTTERPFIQKLFRPVAADGQLHTLGDLLREVC 223

Query: 286 PKISIDKCKLNGILVILVHGIAIPLDTPLQWMSEHLSYPDNFLHIVV 332
           P  ++          +++HGI   L+TPLQW+SEHLSYPDNFLHI +
Sbjct: 224 PS-AVAPEDGEKKSQVMIHGIEPLLETPLQWLSEHLSYPDNFLHISI 269

Required for autophagy. Conjugates to ATG12 and associates with isolation membrane to form cup-shaped isolation membrane and autophagosome. The conjugate detaches from the membrane immediately before or after autophagosome formation is completed.

Sus scrofa (taxid: 9823)

>sp|Q9W3R7|ATG5_DROME Autophagy protein 5 OS=Drosophila melanogaster GN=Atg5 PE=2 SV=2

 Score =  234 bits (597), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 132/290 (45%), Positives = 179/290 (61%), Gaps = 33/290 (11%)

Query: 49  DREVLREVWDGKLPVCFTLLADQVSTVG-EPDPSYLMVPRLSYFPLVLEKSYPFVGIGTT 107
           DREVLR +W+G++ +CF   AD+   VG +P+P YLM+ RLSY PLV +K   +     +
Sbjct: 4   DREVLRMIWEGQIGICFQ--ADRDEIVGIKPEPFYLMISRLSYLPLVTDKVRKYFSRYIS 61

Query: 108 HVQHCFTSVIHHAIVNKHPARNFFLSRTEALSQSSGRHYPIGLLYDL-HVTDNQLPWNIT 166
             +H   +V      N  P R                HYPIG+LYDL H  ++  PW +T
Sbjct: 62  -AEHQDGAVWFD--FNGTPLR---------------LHYPIGVLYDLLHPEEDSTPWCLT 103

Query: 167 VHFDKFPANEILHCPSREAVESHFMSCIKEADVLKHRSQIVSNMQKKEHNQLWLGLQNDK 226
           +HF KFP + ++   S+E +ESH+MSC+KEADVLKHR  ++S MQKK+HNQLWLGL N+K
Sbjct: 104 IHFSKFPEDMLVKLNSKELLESHYMSCLKEADVLKHRGLVISAMQKKDHNQLWLGLVNEK 163

Query: 227 FDQFWVINKKLMEP-GEGGGFKHIPFRCY-QGDLPFSQCLVKPITNEGNPKTLQNLFEEV 284
           FDQFW +N++LMEP G+   FK+IP R Y   D  ++Q L+ PI+  G  K+L +L  E+
Sbjct: 164 FDQFWAVNRRLMEPYGDLESFKNIPLRIYTDDDFTYTQKLISPISVGGQKKSLADLMAEL 223

Query: 285 -YPKISIDKCKLNGILVILVHGIAIPLDTPLQWMSEHLSYPDNFLHIVVN 333
             P      C+         HGI +  +T LQWMSEHLSYPDNFLH+ V+
Sbjct: 224 STPVRRAVGCR--------THGIDLHEETQLQWMSEHLSYPDNFLHLSVD 265

Required for autophagy.

Drosophila melanogaster (taxid: 7227)

>sp|Q0UXN8|ATG5_PHANO Autophagy protein 5 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) GN=ATG5 PE=3 SV=1

 Score = 94.4 bits (233), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/324 (25%), Positives = 140/324 (43%), Gaps = 61/324 (18%)

Query: 50  REV---LRE-VWDGKLPVCFTLLADQVSTVGEPDPSYLMVPRLSYFPLVLEKSYPFVGIG 105
           REV   LRE VW+G +P+   L      T  + D   +  PRLSY  L++ K + F    
Sbjct: 4   REVTSRLREKVWNGSVPLEIRLHKGDCRTYDDSDAYLIQFPRLSYLALLIHKLHAFFA-- 61

Query: 106 TTHVQHCFTSVIHHAIVNKHPARNFFLSRTEALSQSSGRHYPIGLLYDLHV--------- 156
                    S+I+  I   HP+  +F      L      HYP+GLLYDL+          
Sbjct: 62  --------PSLIYPDI---HPSDLWFSYEGVPLKW----HYPLGLLYDLYSGAEPYHPSD 106

Query: 157 -------------TDNQLPWNITVHFDKFPANEILHCPSRE-AVESHFMSCIKEADVLKH 202
                        +   LPW +T+H   +P  +++   +    +   F+  +KEAD L+ 
Sbjct: 107 SPPPSPTTPSKQDSKQPLPWRLTLHTSAYPTTQLIPLDNNNLQIHDLFIHSVKEADYLRT 166

Query: 203 RS-QIVSNMQKKEHNQLWLGLQNDKFDQFWVINKKLMEPGEGGGFKHIPFRCY------- 254
            + + V  + + +  QLW  +    F  F  IN+KL+ P +G   +H+P R Y       
Sbjct: 167 GTGKTVMFLSQADSTQLWDAVVKHDFALFNPINQKLLNP-QGVNLRHLPVRLYLPHAGVD 225

Query: 255 -----QGDLPFSQCLVKPITNEGNPKTLQNLFEEVYPKISIDKCKLNGILV-ILVHGIAI 308
                 G +   Q LVK       P+T+     ++ P  ++   + + +L   ++HG  +
Sbjct: 226 EEDRGMGSVRVVQSLVKVEVGSRQPQTIGTALNQILP--TLFPSRRSALLAQAVLHGAVV 283

Query: 309 PLDTPLQWMSEHLSYPDNFLHIVV 332
           PL   ++ +   ++Y D +LHI +
Sbjct: 284 PLGASVEELIRSVAYLDGWLHIAI 307

Involved in cytoplasm to vacuole transport (Cvt) and autophagy vesicles formation. May be required for ATG8 association to the vesicle membranes.

Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) (taxid: 321614)

>sp|A1DMA1|ATG5_NEOFI Autophagy protein 5 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=atg5 PE=3 SV=1

 Score = 92.0 bits (227), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 85/331 (25%), Positives = 139/331 (41%), Gaps = 68/331 (20%)

Query: 51  EVLREVWDGKLPVCFTLLADQVSTVGEPDPSYLMVPRLSYFPLVLEKSYPFVGIGTTHVQ 110
            + R VWDGKLP+  TL + +  T  + DP  +  PR+SY P +L +   F         
Sbjct: 15  SIQRAVWDGKLPLQITLASSESRTYDQTDPYLIACPRISYLPSLLPRLRAF--------- 65

Query: 111 HCFTSVIHHAIVNKHPARNFFLSRTEALSQSSGRHYPIGLLYDLHV-------------T 157
             F+S +     N  P   +F      L      H P+GLLYDL+              T
Sbjct: 66  --FSSSLIEP--NSQPHEGWFSFEGVPLKW----HLPVGLLYDLYAGADPASKGTRIDET 117

Query: 158 D-------NQLPWNITVHFDKFPANEILHCPSREAV-ESHFMSCIKEADVLKH-RSQIVS 208
           D       + LPW +TVHF  +P  E++   +   V    F++ +KEAD L++  ++ + 
Sbjct: 118 DHPSSSLSDTLPWRLTVHFSDWPDEELVRLDADGMVMHDAFINSVKEADFLRNGTAKGIM 177

Query: 209 NMQKKEHNQLWLGLQNDKFDQFWVINKKLMEPGEGGGFKHIPFRCYQGDLPFS------- 261
            + K++   LW  +Q+     F  I+  L+ P     F++IP R +   LP S       
Sbjct: 178 TLSKEDSAGLWQAVQDVDLPSFQRISNILLPP-PNQPFRNIPIRFF---LPLSPDSGSPS 233

Query: 262 ----QCLVKP-ITNEGNPKTLQNLFEEVYPKISIDKCKLNGILVIL-------------V 303
               Q  + P I    N     NL      ++      L+ +L  L             +
Sbjct: 234 LKVVQSPLPPSIPVATNTSQSTNLRNSPATQVQTLGSALHSLLPNLFPSRRTPVLAKPVL 293

Query: 304 HGIAIPLDTPLQWMSEHLSYPDNFLHIVVNV 334
           HG A+P+  P++ +    +Y D + +IV+ +
Sbjct: 294 HGAAVPMSAPIEELVRSCAYGDGWAYIVIRM 324

Involved in cytoplasm to vacuole transport (Cvt) and autophagy vesicles formation. May be required for ATG8 association to the vesicle membranes.

Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) (taxid: 331117)

>sp|Q4WNA5|ATG5_ASPFU Autophagy protein 5 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=atg5 PE=3 SV=1

 Score = 90.5 bits (223), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/331 (24%), Positives = 138/331 (41%), Gaps = 68/331 (20%)

Query: 51  EVLREVWDGKLPVCFTLLADQVSTVGEPDPSYLMVPRLSYFPLVLEKSYPFVGIGTTHVQ 110
            + R VWDGKLP+  TL + +  T  + DP  +  PR+SY P +L +   F         
Sbjct: 15  SIQRAVWDGKLPLQITLASSESRTYDQTDPYLIACPRISYLPSLLPRLRAFFS------- 67

Query: 111 HCFTSVIHHAIVNKHPARNFFLSRTEALSQSSGRHYPIGLLYDLHVT------------- 157
               S+I     N  P   +F      L      H P+GLLYDL+               
Sbjct: 68  ---PSLIEP---NSQPHEGWFSFEGVPLKW----HLPVGLLYDLYAGADPASKGTRVDET 117

Query: 158 -------DNQLPWNITVHFDKFPANEILHCPSREAV-ESHFMSCIKEADVLKH-RSQIVS 208
                  ++ LPW +TVHF  +P  E++   +   V    F++ +KEAD L++  ++ + 
Sbjct: 118 DHPTSSLNDTLPWRLTVHFSDWPDEELVRLDADGMVMHDAFINSVKEADFLRNGTAKGIM 177

Query: 209 NMQKKEHNQLWLGLQNDKFDQFWVINKKLMEPGEGGGFKHIPFRCYQGDLPFS------- 261
            + K++   LW  +Q+     F  I+  L+ P     F+++P R +   LP S       
Sbjct: 178 TLSKEDSAGLWQAVQDVDLLSFQRISNILLPP-PNQPFRNVPIRFF---LPLSPDSGSPS 233

Query: 262 ----QCLVKP-ITNEGNPKTLQNLFEEVYPKISIDKCKLNGILVIL-------------V 303
               Q  + P I    N     NL      ++      L+ +L  L             +
Sbjct: 234 LKVVQSPLPPNIPATTNTSQSTNLRHSPATQVQTLGSALHSLLPNLFPSRRTPVLAKPVL 293

Query: 304 HGIAIPLDTPLQWMSEHLSYPDNFLHIVVNV 334
           HG A+P+  P++ +    +Y D +++IV+ +
Sbjct: 294 HGAAVPMSAPIEELVRSCAYGDGWVYIVIRM 324

Involved in cytoplasm to vacuole transport (Cvt) and autophagy vesicles formation. May be required for atg8 association to the vesicle membranes.

Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	336
242020280	266	Autophagy protein, putative [Pediculus h	0.767	0.969	0.586	2e-84
156544064	267	PREDICTED: autophagy protein 5 [Nasonia	0.764	0.962	0.541	2e-80
91076774	263	PREDICTED: similar to Autophagy-specific	0.767	0.980	0.552	7e-79
322782985	273	hypothetical protein SINV_15247 [Solenop	0.770	0.948	0.538	2e-78
307180042	264	Autophagy protein 5 [Camponotus floridan	0.758	0.965	0.526	3e-78
350415977	265	PREDICTED: autophagy protein 5-like [Bom	0.770	0.977	0.526	4e-78
340711542	265	PREDICTED: autophagy protein 5-like [Bom	0.770	0.977	0.529	5e-78
66546402	265	PREDICTED: autophagy protein 5 [Apis mel	0.770	0.977	0.533	7e-78
332016597	265	Autophagy protein 5 [Acromyrmex echinati	0.770	0.977	0.535	9e-78
307200161	265	Autophagy protein 5 [Harpegnathos saltat	0.770	0.977	0.531	3e-77

>gi|242020280|ref|XP_002430583.1| Autophagy protein, putative [Pediculus humanus corporis] gi|212515755|gb|EEB17845.1| Autophagy protein, putative [Pediculus humanus corporis]

 Score =  318 bits (816), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 166/283 (58%), Positives = 196/283 (69%), Gaps = 25/283 (8%)

Query: 49  DREVLREVWDGKLPVCFTLLADQVSTVGEPDPSYLMVPRLSYFPLVLEKSYPFVGIGTTH 108
           DREVLREVW+G+LP+ F L  D V  + EPDP YL+VPRLSYFPLV +K           
Sbjct: 4   DREVLREVWEGRLPISFRLDPDDVHGLREPDPVYLLVPRLSYFPLVTDK----------- 52

Query: 109 VQHCFTSVIHHAIVNKHPARNFFLSRTEALSQSSGRHYPIGLLYDLHVTDNQLPWNITVH 168
           ++  F+    H   +K  A  +       L      HYPIG+LYDL  +D QLPWNITVH
Sbjct: 53  IRKQFS---RHISTDKQDAEMWLDFNGIPLKW----HYPIGVLYDLSASDIQLPWNITVH 105

Query: 169 FDKFPANEILHCPSREAVESHFMSCIKEADVLKHRSQIVSNMQKKEHNQLWLGLQNDKFD 228
           F KFP  EI+HC S+E VES+FMSCIKEADVLKHRSQ+VSNMQKK+HNQLWLGLQNDKFD
Sbjct: 106 FSKFPEKEIMHCYSKEVVESYFMSCIKEADVLKHRSQVVSNMQKKDHNQLWLGLQNDKFD 165

Query: 229 QFWVINKKLMEPGEGGGFKHIPFRCYQGDLPFSQCLVKPITNEGNPKTLQNLFEEVYPKI 288
           QFW +NKKLME      FK+IPFRCYQ D  + Q L++PIT EG  K LQNL +EV+ + 
Sbjct: 166 QFWAVNKKLMEVSGDENFKYIPFRCYQSDDYYIQKLIRPITEEGQKKILQNLIDEVFLEN 225

Query: 289 SIDKCKLNGILVILVHGIAIPLDTPLQWMSEHLSYPDNFLHIV 331
           S +K K      +  HGI  P DTPLQWMSEHLSYPDNFLH++
Sbjct: 226 S-EKVK------VFTHGIEPPRDTPLQWMSEHLSYPDNFLHLI 261

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156544064|ref|XP_001605142.1| PREDICTED: autophagy protein 5 [Nasonia vitripennis]

 Score =  305 bits (782), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 156/288 (54%), Positives = 193/288 (67%), Gaps = 31/288 (10%)

Query: 49  DREVLREVWDGKLPVCFTLLADQVSTVGEPDPSYLMVPRLSYFPLVLEKSYPFVGIGTTH 108
           DREVLRE+W+GK+PVCF L +++V  +  PDP YLMVPRLSYFPL  +K           
Sbjct: 4   DREVLREIWEGKVPVCFQLDSEEVYELQAPDPFYLMVPRLSYFPLCTDK----------- 52

Query: 109 VQHCFTSVIHHAIVNKHPARNFFLSRTEALSQSSGR----HYPIGLLYDLHVTDNQLPWN 164
           V+  F   +   I +K          TE   + +G     H PIG+L DL+  D QLPWN
Sbjct: 53  VRKHFLRHVQQDIQDK--------QETEMWLEFNGTPLKWHLPIGVLMDLYHNDIQLPWN 104

Query: 165 ITVHFDKFPANEILHCPSREAVESHFMSCIKEADVLKHRSQIVSNMQKKEHNQLWLGLQN 224
           I VHFDKFP   ++HC ++E VESHF+SCIKEADVLKHR QIVSNMQKK+HNQLWLGL N
Sbjct: 105 IVVHFDKFPEETLMHCQNKEVVESHFLSCIKEADVLKHRGQIVSNMQKKDHNQLWLGLLN 164

Query: 225 DKFDQFWVINKKLMEPGEGGGFKHIPFRCYQGDLPFSQCLVKPITNEGNPKTLQNLFEEV 284
           DKFDQFW +N+KLME G   GFK+IPFRCY  +  + Q LVKPI+ +G  KTL++L  EV
Sbjct: 165 DKFDQFWAVNRKLMETGSEEGFKYIPFRCYTSEDKYIQKLVKPISEDGQRKTLKHLLNEV 224

Query: 285 YPKISIDKCKLNGILVILVHGIAIPLDTPLQWMSEHLSYPDNFLHIVV 332
           +P             ++  HGI  PLDTPLQW+SEHLS+PDNFLH+ +
Sbjct: 225 FPDTE--------QAIVRTHGILPPLDTPLQWLSEHLSFPDNFLHLTL 264

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91076774|ref|XP_973840.1| PREDICTED: similar to Autophagy-specific protein, putative [Tribolium castaneum] gi|270001850|gb|EEZ98297.1| hypothetical protein TcasGA2_TC000747 [Tribolium castaneum]

 Score =  300 bits (767), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 159/288 (55%), Positives = 195/288 (67%), Gaps = 30/288 (10%)

Query: 49  DREVLREVWDGKLPVCFTLLADQVSTVGEPDPSYLMVPRLSYFPLVLEKSYPFVGIGTTH 108
           DRE+LREVW+GKLP+ F L  D+V  + +PDP YLMVPRLSYFPLV +K           
Sbjct: 4   DREILREVWEGKLPISFQLDPDEVVELQQPDPFYLMVPRLSYFPLVTDK----------- 52

Query: 109 VQHCFTSVIHHAIVNKHPARNFFLSRTEALSQSSGRHYPIGLLYDLHVT-DNQLPWNITV 167
           V+  F   +     N    R  +L   E   Q    HYPIG+LYDL +T D+QLPWNITV
Sbjct: 53  VRKHFLRYV----ANDKQDREMWL---EYDGQPMKWHYPIGVLYDLLITSDDQLPWNITV 105

Query: 168 HFDKFPANEILHCPSREAVESHFMSCIKEADVLKHRSQIVSNMQKKEHNQLWLGLQNDKF 227
           HFDKFP N+I    ++E VES+FM+C+KEADVLKHR QI SNMQKK+HNQLWLGLQNDKF
Sbjct: 106 HFDKFPENQIYKFSNKETVESYFMACLKEADVLKHRGQIASNMQKKDHNQLWLGLQNDKF 165

Query: 228 DQFWVINKKLME-PGEGGGFKHIPFRCYQGDLPFSQCLVKPITNEGNPKTLQNLFEEVYP 286
           DQFW +N+KLME   E   FK+IPF+CY  D  + Q L+KP+  +G  KTLQ+L  E++P
Sbjct: 166 DQFWAVNRKLMEVSQEQEHFKYIPFKCYLDD-GYRQKLIKPVDEDGRRKTLQDLINEMFP 224

Query: 287 KISIDKCKLNGILVILVHGIAIPLDTPLQWMSEHLSYPDNFLHIVVNV 334
             ++         VI  HG+  PL+TPLQWMSEHLSYPDNFLH+ V  
Sbjct: 225 GKNV---------VIKTHGMIPPLETPLQWMSEHLSYPDNFLHLCVQT 263

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322782985|gb|EFZ10703.1| hypothetical protein SINV_15247 [Solenopsis invicta]

 Score =  298 bits (764), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 153/284 (53%), Positives = 188/284 (66%), Gaps = 25/284 (8%)

Query: 49  DREVLREVWDGKLPVCFTLLADQVSTVGEPDPSYLMVPRLSYFPLVLEKSYPFVGIGTTH 108
           DREVLRE+WDGK+PVCFTL ++++  +  PDP YLMVPRLSYFPL  EK           
Sbjct: 12  DREVLREIWDGKIPVCFTLNSEEICDLQGPDPFYLMVPRLSYFPLCTEK----------- 60

Query: 109 VQHCFTSVIHHAIVNKHPARNFFLSRTEALSQSSGRHYPIGLLYDLHVTDNQLPWNITVH 168
           V+  F   I H   +       +L   E        HYPIG+L D++  D QLPWNI VH
Sbjct: 61  VRKHF---IRHIQSDSKQDHEMWL---EFNGMPLKWHYPIGVLLDIYFNDIQLPWNIVVH 114

Query: 169 FDKFPANEILHCPSREAVESHFMSCIKEADVLKHRSQIVSNMQKKEHNQLWLGLQNDKFD 228
           FDKFP N ++HC ++E VE+HF+SCIKEADVLKHR QIVS+MQKK+H QLW G+ NDKFD
Sbjct: 115 FDKFPENVLMHCQNKEVVEAHFLSCIKEADVLKHRGQIVSSMQKKDHTQLWNGIMNDKFD 174

Query: 229 QFWVINKKLMEPGEGGGFKHIPFRCYQGDLPFSQCLVKPITNEGNPKTLQNLFEEVYPKI 288
           QFW +N +LME     GFK+IPFRCY  +  + Q LVKP+  EG  KTL+ L  EV+P  
Sbjct: 175 QFWSVNGRLMETSTEEGFKYIPFRCYTSEDKYVQRLVKPMNEEGQRKTLKTLLNEVFPD- 233

Query: 289 SIDKCKLNGILVILVHGIAIPLDTPLQWMSEHLSYPDNFLHIVV 332
                     + +  HGI  PL+TPLQWMSEHLSYPDNFLH++V
Sbjct: 234 -------QENVTVRTHGIIPPLETPLQWMSEHLSYPDNFLHLIV 270

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307180042|gb|EFN68118.1| Autophagy protein 5 [Camponotus floridanus]

 Score =  298 bits (762), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 151/287 (52%), Positives = 190/287 (66%), Gaps = 32/287 (11%)

Query: 49  DREVLREVWDGKLPVCFTLLADQVSTVGEPDPSYLMVPRLSYFPLVLEKSYPFVGIGTTH 108
           DREVLRE+WDGK+PVCFTL ++++  +  PDP YLMVPRLSYFPL  EK      +    
Sbjct: 4   DREVLREIWDGKIPVCFTLNSEEICDLQGPDPFYLMVPRLSYFPLCTEK------VRKHF 57

Query: 109 VQHCFTSVIHHAI---VNKHPARNFFLSRTEALSQSSGRHYPIGLLYDLHVTDNQLPWNI 165
           ++H  +    H +    N  P +                HYPIG+L D++  D QLPWNI
Sbjct: 58  IRHIQSDKQEHEMWLEFNGIPLK---------------WHYPIGVLLDIYFNDIQLPWNI 102

Query: 166 TVHFDKFPANEILHCPSREAVESHFMSCIKEADVLKHRSQIVSNMQKKEHNQLWLGLQND 225
            VHFDKFP N ++HC ++E VE+HF+SCIKEADVLKHR QIVS+MQKK+H QLW G+ ND
Sbjct: 103 VVHFDKFPENVLMHCQNKEVVEAHFLSCIKEADVLKHRGQIVSSMQKKDHTQLWNGIMND 162

Query: 226 KFDQFWVINKKLMEPGEGGGFKHIPFRCYQGDLPFSQCLVKPITNEGNPKTLQNLFEEVY 285
           KFDQFW +N +LME     GFK+IPFRCY  +  + Q LVKP+  EG  KTL++L  EV+
Sbjct: 163 KFDQFWSVNGRLMETSTEEGFKYIPFRCYTNEDKYIQKLVKPMNEEGQRKTLKHLLNEVF 222

Query: 286 PKISIDKCKLNGILVILVHGIAIPLDTPLQWMSEHLSYPDNFLHIVV 332
           P            + +  HGI  PL+TPLQWMSEHLSYPDNFLH++V
Sbjct: 223 PD--------QENVTVRTHGIVPPLETPLQWMSEHLSYPDNFLHLIV 261

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350415977|ref|XP_003490808.1| PREDICTED: autophagy protein 5-like [Bombus impatiens]

 Score =  297 bits (761), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 150/285 (52%), Positives = 194/285 (68%), Gaps = 26/285 (9%)

Query: 49  DREVLREVWDGKLPVCFTLLADQVSTVGEPDPSYLMVPRLSYFPLVLEKSYPFVGIGTTH 108
           DREVLRE+WDGK+PVCFTL ++++  +  PDP YLMVPRLSYFPL  +K           
Sbjct: 4   DREVLREIWDGKIPVCFTLDSEEICELQGPDPFYLMVPRLSYFPLCTDK----------- 52

Query: 109 VQHCFTSVIHHAIVNKHPARNFFLSRTEALSQSSGRHYPIGLLYDLHVTDNQLPWNITVH 168
           ++  F   I H   +       +L   E        HYPIG+L D++  D +LPWNI VH
Sbjct: 53  IRKHF---IRHIQSDSKQEHEMWL---EFNGIPLKWHYPIGVLLDIYSNDVELPWNIVVH 106

Query: 169 FDKFPANEILHCPSREAVESHFMSCIKEADVLKHRSQIVSNMQKKEHNQLWLGLQNDKFD 228
           FD+FP N ++HC ++E VE++F+SC+KEADVLKHRSQ+VS+MQKK+HNQLW GL NDKFD
Sbjct: 107 FDRFPENVLMHCQNKEVVEAYFLSCVKEADVLKHRSQVVSSMQKKDHNQLWSGLLNDKFD 166

Query: 229 QFWVINKKLMEPGEG-GGFKHIPFRCYQGDLPFSQCLVKPITNEGNPKTLQNLFEEVYPK 287
           QFW +N+KLME      GFK+IPFRCY  +  + Q LVKP+  EG  KTL++L  EV+P 
Sbjct: 167 QFWSVNRKLMEASNTEEGFKYIPFRCYTSEDKYVQKLVKPVNEEGQRKTLRHLLNEVFPD 226

Query: 288 ISIDKCKLNGILVILVHGIAIPLDTPLQWMSEHLSYPDNFLHIVV 332
                   N  + +  HGI+ PL+TPLQWMSEH+SYPDNFLH++V
Sbjct: 227 --------NENVTVFTHGISPPLETPLQWMSEHMSYPDNFLHLIV 263

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340711542|ref|XP_003394334.1| PREDICTED: autophagy protein 5-like [Bombus terrestris]

 Score =  297 bits (760), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 151/285 (52%), Positives = 194/285 (68%), Gaps = 26/285 (9%)

Query: 49  DREVLREVWDGKLPVCFTLLADQVSTVGEPDPSYLMVPRLSYFPLVLEKSYPFVGIGTTH 108
           DREVLRE+WDGK+PVCFTL ++++  +  PDP YLMVPRLSYFPL  +K           
Sbjct: 4   DREVLREIWDGKIPVCFTLDSEEICELQGPDPFYLMVPRLSYFPLCTDK----------- 52

Query: 109 VQHCFTSVIHHAIVNKHPARNFFLSRTEALSQSSGRHYPIGLLYDLHVTDNQLPWNITVH 168
           ++  F   I H   +       +L   E        HYPIG+L D++  D +LPWNI VH
Sbjct: 53  IRKHF---IRHIQSDSKQEHEMWL---EFNGIPLKWHYPIGVLLDIYSNDVELPWNIVVH 106

Query: 169 FDKFPANEILHCPSREAVESHFMSCIKEADVLKHRSQIVSNMQKKEHNQLWLGLQNDKFD 228
           FD+FP N ++HC ++E VE++F+SC+KEADVLKHRSQ+VS+MQKK+HNQLW GL NDKFD
Sbjct: 107 FDRFPENVLMHCQNKEVVEAYFLSCVKEADVLKHRSQVVSSMQKKDHNQLWSGLLNDKFD 166

Query: 229 QFWVINKKLMEPGEG-GGFKHIPFRCYQGDLPFSQCLVKPITNEGNPKTLQNLFEEVYPK 287
           QFW +N+KLME      GFK+IPFRCY  +  + Q LVKP+  EG  KTL++L  EV+P 
Sbjct: 167 QFWSVNRKLMEASNTEEGFKYIPFRCYISEDKYVQKLVKPVNEEGQRKTLRHLLNEVFPD 226

Query: 288 ISIDKCKLNGILVILVHGIAIPLDTPLQWMSEHLSYPDNFLHIVV 332
                   N  + +  HGI+ PL+TPLQWMSEH+SYPDNFLH+VV
Sbjct: 227 --------NENVTVFTHGISPPLETPLQWMSEHMSYPDNFLHLVV 263

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|66546402|ref|XP_623456.1| PREDICTED: autophagy protein 5 [Apis mellifera] gi|380029990|ref|XP_003698645.1| PREDICTED: autophagy protein 5-like [Apis florea]

 Score =  296 bits (759), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 152/285 (53%), Positives = 192/285 (67%), Gaps = 26/285 (9%)

Query: 49  DREVLREVWDGKLPVCFTLLADQVSTVGEPDPSYLMVPRLSYFPLVLEKSYPFVGIGTTH 108
           DREVLRE+WDGK+PVCFTL ++++  +  PDP YLMVPRLSYFPL  +K           
Sbjct: 4   DREVLREIWDGKIPVCFTLDSEEICELQGPDPFYLMVPRLSYFPLCTDK----------- 52

Query: 109 VQHCFTSVIHHAIVNKHPARNFFLSRTEALSQSSGRHYPIGLLYDLHVTDNQLPWNITVH 168
           ++  F   I H   +       +L   E        HYPIG+L D++  D +LPWNI VH
Sbjct: 53  IRKHF---IRHIQSDSKQEHEMWL---EFNGIPLKWHYPIGVLLDIYSNDVELPWNIVVH 106

Query: 169 FDKFPANEILHCPSREAVESHFMSCIKEADVLKHRSQIVSNMQKKEHNQLWLGLQNDKFD 228
           FD+FP N ++HC ++E VE++F+SCIKEADVLKHR Q+VS+MQKK+HNQLW GL NDKFD
Sbjct: 107 FDRFPENVLMHCQNKEVVEAYFLSCIKEADVLKHRGQVVSSMQKKDHNQLWSGLLNDKFD 166

Query: 229 QFWVINKKLMEPGE-GGGFKHIPFRCYQGDLPFSQCLVKPITNEGNPKTLQNLFEEVYPK 287
           QFW +N+KLME      GFK+IPFRCY  +  + Q LVKP+  EG  KTL++L  EV+P 
Sbjct: 167 QFWSVNRKLMEASNIEEGFKYIPFRCYTSEDKYVQKLVKPVNEEGQRKTLRHLLNEVFPD 226

Query: 288 ISIDKCKLNGILVILVHGIAIPLDTPLQWMSEHLSYPDNFLHIVV 332
                   N  + +  HGI  PL+TPLQWMSEHLSYPDNFLH+VV
Sbjct: 227 --------NENITVFTHGITPPLETPLQWMSEHLSYPDNFLHLVV 263

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332016597|gb|EGI57478.1| Autophagy protein 5 [Acromyrmex echinatior]

 Score =  296 bits (758), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 152/284 (53%), Positives = 189/284 (66%), Gaps = 25/284 (8%)

Query: 49  DREVLREVWDGKLPVCFTLLADQVSTVGEPDPSYLMVPRLSYFPLVLEKSYPFVGIGTTH 108
           DREVLRE+WDGK+PVCFTL ++++  +  PDP YLMVPRLSYFPL  EK           
Sbjct: 4   DREVLREIWDGKIPVCFTLNSEEICDLQGPDPFYLMVPRLSYFPLCTEK----------- 52

Query: 109 VQHCFTSVIHHAIVNKHPARNFFLSRTEALSQSSGRHYPIGLLYDLHVTDNQLPWNITVH 168
           V+  F   I H   +       +L   E        HYPIG+L D++  D QLPWNI VH
Sbjct: 53  VRKHF---IRHIQSDSKQEHEMWL---EFNGIPLKWHYPIGVLLDIYFNDIQLPWNIVVH 106

Query: 169 FDKFPANEILHCPSREAVESHFMSCIKEADVLKHRSQIVSNMQKKEHNQLWLGLQNDKFD 228
           FDKFP N ++HC ++E VE+HF+SCIKEADVLKHR QIVS+MQKK+H QLW G+ NDKFD
Sbjct: 107 FDKFPENVLMHCQNKEIVEAHFLSCIKEADVLKHRGQIVSSMQKKDHTQLWNGIMNDKFD 166

Query: 229 QFWVINKKLMEPGEGGGFKHIPFRCYQGDLPFSQCLVKPITNEGNPKTLQNLFEEVYPKI 288
           QFW +N +LME     GFK+IPFRCY  +  + Q L+KP+  EG  KTL++L  EV+P  
Sbjct: 167 QFWSVNGRLMEANTEEGFKYIPFRCYTSEDKYIQRLIKPMNEEGQRKTLKHLLNEVFPD- 225

Query: 289 SIDKCKLNGILVILVHGIAIPLDTPLQWMSEHLSYPDNFLHIVV 332
                     + +  HGI  PL+TPLQWMSEHLSYPDNFLH++V
Sbjct: 226 -------QENVTVRTHGIIPPLETPLQWMSEHLSYPDNFLHLIV 262

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307200161|gb|EFN80469.1| Autophagy protein 5 [Harpegnathos saltator]

 Score =  294 bits (753), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 151/284 (53%), Positives = 188/284 (66%), Gaps = 25/284 (8%)

Query: 49  DREVLREVWDGKLPVCFTLLADQVSTVGEPDPSYLMVPRLSYFPLVLEKSYPFVGIGTTH 108
           DRE+LRE+WDGK+PVCFTL +++   +  PDP YLMVPRLSYFPL  EK           
Sbjct: 4   DREMLREIWDGKIPVCFTLDSEETCELQGPDPFYLMVPRLSYFPLCTEK----------- 52

Query: 109 VQHCFTSVIHHAIVNKHPARNFFLSRTEALSQSSGRHYPIGLLYDLHVTDNQLPWNITVH 168
           V+  F   I H   +       +L   E        HYPIG+L D++  D QLPWNI VH
Sbjct: 53  VKKHF---IRHIQSDSKQEHEMWL---EFNGIPLKWHYPIGVLLDIYFNDIQLPWNIVVH 106

Query: 169 FDKFPANEILHCPSREAVESHFMSCIKEADVLKHRSQIVSNMQKKEHNQLWLGLQNDKFD 228
           FDKFP N ++HC ++E VE+HF+SCIKEADVLKHR QIVS+MQKK+H QLW G+ NDKFD
Sbjct: 107 FDKFPENVLMHCQNKEVVEAHFLSCIKEADVLKHRGQIVSSMQKKDHTQLWNGIMNDKFD 166

Query: 229 QFWVINKKLMEPGEGGGFKHIPFRCYQGDLPFSQCLVKPITNEGNPKTLQNLFEEVYPKI 288
           QFW +N +LME     GFK+IPFRCY  +  + Q LV+PI  EG  KTL++L  EV+P  
Sbjct: 167 QFWSVNGRLMEAITEEGFKYIPFRCYTSEDKYIQKLVRPINEEGQRKTLKHLLSEVFPD- 225

Query: 289 SIDKCKLNGILVILVHGIAIPLDTPLQWMSEHLSYPDNFLHIVV 332
                     + +  HGI  PL+TPLQWM+EHLSYPDNFLH++V
Sbjct: 226 -------QESVTVRTHGIIPPLETPLQWMAEHLSYPDNFLHLIV 262

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	336
ZFIN|ZDB-GENE-040801-149	275	atg5 "ATG5 autophagy related 5	0.550	0.672	0.560	3.2e-73
UNIPROTKB|Q9H1Y0	275	ATG5 "Autophagy protein 5" [Ho	0.556	0.68	0.581	6.7e-73
UNIPROTKB|F6V678	275	ATG5 "Uncharacterized protein"	0.550	0.672	0.580	8.6e-73
UNIPROTKB|Q3MQ24	275	ATG5 "Autophagy protein 5" [Bo	0.550	0.672	0.575	1.1e-72
MGI|MGI:1277186	275	Atg5 "autophagy related 5" [Mu	0.553	0.676	0.572	4.7e-72
UNIPROTKB|Q5ZHW2	275	ATG5 "Uncharacterized protein"	0.556	0.68	0.560	2e-71
RGD|1359580	275	Atg5 "autophagy related 5" [Ra	0.553	0.676	0.562	2.6e-71
UNIPROTKB|Q3MQ04	275	ATG5 "Autophagy protein 5" [Su	0.553	0.676	0.552	1.4e-70
UNIPROTKB|F1RVE4	275	ATG5 "Autophagy protein 5" [Su	0.550	0.672	0.507	2e-65
UNIPROTKB|I3LTI9	275	ATG5 "Autophagy protein 5" [Su	0.550	0.672	0.502	2.3e-64

ZFIN|ZDB-GENE-040801-149 atg5 "ATG5 autophagy related 5 homolog (S. cerevisiae)" [Danio rerio (taxid:7955)]

 Score = 620 (223.3 bits), Expect = 3.2e-73, Sum P(2) = 3.2e-73
 Identities = 107/191 (56%), Positives = 146/191 (76%)

Query:   145 HYPIGLLYDLHVTDNQLPWNITVHFDKFPANEILHCPSREAVESHFMSCIKEADVLKHRS 204
             HYPIG+L+DLH +++ LPWN+TVHF  FP  ++LHC +   +E+HFMSCIKEAD LKH+ 
Sbjct:    82 HYPIGVLFDLHASNSALPWNVTVHFKNFPEQDLLHCSTNSVIEAHFMSCIKEADALKHKG 141

Query:   205 QIVSNMQKKEHNQLWLGLQNDKFDQFWVINKKLME-PGEGGGFKHIPFRCYQ--GDLPFS 261
             Q++++MQKK+H QLW+GLQNDKFDQFW +N+KLME P E GGF++IPFR YQ   D PF 
Sbjct:   142 QVINDMQKKDHKQLWMGLQNDKFDQFWAMNRKLMEYPTEEGGFRYIPFRIYQTMSDRPFI 201

Query:   262 QCLVKPITNEGNPKTLQNLFEEVYPKISIDKCKLNGILVILVHGIAIPLDTPLQWMSEHL 321
             Q L +P+++EG   TL +L +E++P    D+ K      +++HGI   L+TP+QW+SEHL
Sbjct:   202 QTLFRPVSSEGQALTLGDLLKELFPAAIEDEPKK---FQVMIHGIEPLLETPIQWLSEHL 258

Query:   322 SYPDNFLHIVV 332
             S+PDNFLHI +
Sbjct:   259 SHPDNFLHISI 269

GO:0005737 "cytoplasm" evidence=IEA

GO:0006914 "autophagy" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0007399 "nervous system development" evidence=IMP

UNIPROTKB|Q9H1Y0 ATG5 "Autophagy protein 5" [Homo sapiens (taxid:9606)]

 Score = 614 (221.2 bits), Expect = 6.7e-73, Sum P(2) = 6.7e-73
 Identities = 111/191 (58%), Positives = 144/191 (75%)

Query:   145 HYPIGLLYDLHVTDNQLPWNITVHFDKFPANEILHCPSREAVESHFMSCIKEADVLKHRS 204
             HYPIGLL+DL  + + LPWNITVHF  FP  ++LHCPS++A+E+HFMSC+KEAD LKH+S
Sbjct:    80 HYPIGLLFDLLASSSALPWNITVHFKSFPEKDLLHCPSKDAIEAHFMSCMKEADALKHKS 139

Query:   205 QIVSNMQKKEHNQLWLGLQNDKFDQFWVINKKLME-PGEGGGFKHIPFRCYQG--DLPFS 261
             Q+++ MQKK+H QLW+GLQND+FDQFW IN+KLME P E  GF++IPFR YQ   + PF 
Sbjct:   140 QVINEMQKKDHKQLWMGLQNDRFDQFWAINRKLMEYPAEENGFRYIPFRIYQTTTERPFI 199

Query:   262 QCLVKPITNEGNPKTLQNLFEEVYPKISIDKCKLNGILVILVHGIAIPLDTPLQWMSEHL 321
             Q L +P+  +G   TL +L +EV P  +ID         +++HGI   L+TPLQW+SEHL
Sbjct:   200 QKLFRPVAADGQLHTLGDLLKEVCPS-AIDPEDGEKKNQVMIHGIEPMLETPLQWLSEHL 258

Query:   322 SYPDNFLHIVV 332
             SYPDNFLHI +
Sbjct:   259 SYPDNFLHISI 269

GO:0006915 "apoptotic process" evidence=IEA

GO:0001974 "blood vessel remodeling" evidence=IEA

GO:0031397 "negative regulation of protein ubiquitination" evidence=IEA

GO:0042311 "vasodilation" evidence=IEA

GO:0042493 "response to drug" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0048840 "otolith development" evidence=IEA

GO:0055015 "ventricular cardiac muscle cell development" evidence=IEA

GO:0060047 "heart contraction" evidence=IEA

GO:0000045 "autophagic vacuole assembly" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0006914 "autophagy" evidence=ISS

GO:0034045 "pre-autophagosomal structure membrane" evidence=ISS

GO:0043687 "post-translational protein modification" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0005776 "autophagic vacuole" evidence=IDA

GO:0032480 "negative regulation of type I interferon production" evidence=TAS

GO:0045087 "innate immune response" evidence=TAS

UNIPROTKB|F6V678 ATG5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 613 (220.8 bits), Expect = 8.6e-73, Sum P(2) = 8.6e-73
 Identities = 112/193 (58%), Positives = 144/193 (74%)

Query:   145 HYPIGLLYDLHVTDNQLPWNITVHFDKFPANEILHCPSREAVESHFMSCIKEADVLKHRS 204
             HYPIGLL+DL  + + LPWNITVHF  FP  ++LHCPS++A+E+HFMSC+KEAD LKH+S
Sbjct:    80 HYPIGLLFDLLASSSALPWNITVHFKSFPEKDLLHCPSKDAIEAHFMSCVKEADALKHKS 139

Query:   205 QIVSNMQKKEHNQLWLGLQNDKFDQFWVINKKLME-PGEGGGFKHIPFRCYQG--DLPFS 261
             Q+++ MQKK+H QLW+GLQND+FDQFW IN+KLME P E  GF++IPFR YQ   + PF 
Sbjct:   140 QVINEMQKKDHKQLWMGLQNDRFDQFWAINRKLMEYPAEENGFRYIPFRIYQTTTERPFI 199

Query:   262 QCLVKPITNEGNPKTLQNLFEEVYPKISI--DKCKLNGILVILVHGIAIPLDTPLQWMSE 319
             Q L +P+  +G   TL +L +EV P      D  K N +++   HGI   L+TPLQW+SE
Sbjct:   200 QKLFRPVAADGQLHTLGDLLKEVCPSAIAPEDGEKKNQVMI---HGIEPMLETPLQWLSE 256

Query:   320 HLSYPDNFLHIVV 332
             HLSYPDNFLHI +
Sbjct:   257 HLSYPDNFLHISI 269

GO:0006914 "autophagy" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

UNIPROTKB|Q3MQ24 ATG5 "Autophagy protein 5" [Bos taurus (taxid:9913)]

 Score = 612 (220.5 bits), Expect = 1.1e-72, Sum P(2) = 1.1e-72
 Identities = 111/193 (57%), Positives = 144/193 (74%)

Query:   145 HYPIGLLYDLHVTDNQLPWNITVHFDKFPANEILHCPSREAVESHFMSCIKEADVLKHRS 204
             HYPIGLL+DL  + + LPWNITVHF  FP  ++LHCPS++ +E+HFMSC+KEAD LKH+S
Sbjct:    80 HYPIGLLFDLLASSSALPWNITVHFKSFPEKDLLHCPSKDVIEAHFMSCVKEADALKHKS 139

Query:   205 QIVSNMQKKEHNQLWLGLQNDKFDQFWVINKKLME-PGEGGGFKHIPFRCYQG--DLPFS 261
             Q+++ MQKK+H QLW+GLQND+FDQFW IN+KLME P E  GF++IPFR YQ   + PF 
Sbjct:   140 QVINEMQKKDHKQLWMGLQNDRFDQFWAINRKLMEYPAEENGFRYIPFRIYQTTTERPFI 199

Query:   262 QCLVKPITNEGNPKTLQNLFEEVYPKISI--DKCKLNGILVILVHGIAIPLDTPLQWMSE 319
             Q L +P++ +G   TL +L +EV P      D  K N +++   HGI   L+TPLQW+SE
Sbjct:   200 QKLFRPVSTDGQLHTLGDLLKEVCPSAVAPEDGEKKNQVMI---HGIEPMLETPLQWLSE 256

Query:   320 HLSYPDNFLHIVV 332
             HLSYPDNFLHI +
Sbjct:   257 HLSYPDNFLHISI 269

GO:0060047 "heart contraction" evidence=IEA

GO:0055015 "ventricular cardiac muscle cell development" evidence=IEA

GO:0048840 "otolith development" evidence=IEA

GO:0043687 "post-translational protein modification" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0042493 "response to drug" evidence=IEA

GO:0042311 "vasodilation" evidence=IEA

GO:0034045 "pre-autophagosomal structure membrane" evidence=IEA

GO:0031397 "negative regulation of protein ubiquitination" evidence=IEA

GO:0005776 "autophagic vacuole" evidence=IEA

GO:0001974 "blood vessel remodeling" evidence=IEA

GO:0000045 "autophagic vacuole assembly" evidence=IEA

MGI|MGI:1277186 Atg5 "autophagy related 5" [Mus musculus (taxid:10090)]

 Score = 606 (218.4 bits), Expect = 4.7e-72, Sum P(2) = 4.7e-72
 Identities = 110/192 (57%), Positives = 144/192 (75%)

Query:   145 HYPIGLLYDLHVTDNQLPWNITVHFDKFPANEILHCPSREAVESHFMSCIKEADVLKHRS 204
             HYPIGLL+DL  + + LPWNITVHF  FP  ++LHCPS++AVE+HFMSC+KEAD LKH+S
Sbjct:    80 HYPIGLLFDLLASSSALPWNITVHFKSFPEKDLLHCPSKDAVEAHFMSCMKEADALKHKS 139

Query:   205 QIVSNMQKKEHNQLWLGLQNDKFDQFWVINKKLME-PGEGGGFKHIPFRCYQG--DLPFS 261
             Q+++ MQKK+H QLW+GLQND+FDQFW IN+KLME P E  GF++IPFR YQ   + PF 
Sbjct:   140 QVINEMQKKDHKQLWMGLQNDRFDQFWAINRKLMEYPPEENGFRYIPFRIYQTTTERPFI 199

Query:   262 QCLVKPITNEGNPKTLQNLFEEVYPK-ISIDKCKLNGILVILVHGIAIPLDTPLQWMSEH 320
             Q L +P+  +G   TL +L  EV P  ++ +  +      +++HGI   L+TPLQW+SEH
Sbjct:   200 QKLFRPVAADGQLHTLGDLLREVCPSAVAPEDGEKRS--QVMIHGIEPMLETPLQWLSEH 257

Query:   321 LSYPDNFLHIVV 332
             LSYPDNFLHI +
Sbjct:   258 LSYPDNFLHISI 269

GO:0000045 "autophagic vacuole assembly" evidence=IMP

GO:0001974 "blood vessel remodeling" evidence=IMP

GO:0002739 "regulation of cytokine secretion involved in immune response" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=IDA

GO:0005776 "autophagic vacuole" evidence=ISA;IDA

GO:0006914 "autophagy" evidence=IMP

GO:0009620 "response to fungus" evidence=IMP

GO:0031397 "negative regulation of protein ubiquitination" evidence=IMP

GO:0034045 "pre-autophagosomal structure membrane" evidence=IDA

GO:0042311 "vasodilation" evidence=IMP

GO:0042493 "response to drug" evidence=IMP

GO:0043066 "negative regulation of apoptotic process" evidence=IMP

GO:0043687 "post-translational protein modification" evidence=IDA

GO:0048840 "otolith development" evidence=IMP

GO:0055015 "ventricular cardiac muscle cell development" evidence=IMP

GO:0060047 "heart contraction" evidence=IMP

UNIPROTKB|Q5ZHW2 ATG5 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 599 (215.9 bits), Expect = 2.0e-71, Sum P(2) = 2.0e-71
 Identities = 107/191 (56%), Positives = 142/191 (74%)

Query:   145 HYPIGLLYDLHVTDNQLPWNITVHFDKFPANEILHCPSREAVESHFMSCIKEADVLKHRS 204
             HYPIGLL+DLH ++  LPW+ITVHF  FP  ++LHC S++ +E+HFM+CIKEAD LKH+S
Sbjct:    80 HYPIGLLFDLHASNTALPWSITVHFKNFPEKDLLHCHSKDVIEAHFMACIKEADALKHKS 139

Query:   205 QIVSNMQKKEHNQLWLGLQNDKFDQFWVINKKLME-PGEGGGFKHIPFRCYQG--DLPFS 261
             Q+++ MQKK+H QLW+GLQNDKF+QFW IN+KLME P E  GF++IPFR YQ   + PF 
Sbjct:   140 QVINEMQKKDHKQLWMGLQNDKFEQFWAINRKLMEYPPEDSGFRYIPFRIYQATTERPFI 199

Query:   262 QCLVKPITNEGNPKTLQNLFEEVYPKISIDKCKLNGILVILVHGIAIPLDTPLQWMSEHL 321
             Q L +PI + G   TL +L ++V P  +I          +++HGI   L+TPLQW+SEH+
Sbjct:   200 QKLFRPIASGGQLHTLGDLLKDVCPS-AITPEDGEKTTQVMIHGIEPMLETPLQWLSEHM 258

Query:   322 SYPDNFLHIVV 332
             SYPDNFLHI +
Sbjct:   259 SYPDNFLHISI 269

GO:0000045 "autophagic vacuole assembly" evidence=IEA

GO:0001974 "blood vessel remodeling" evidence=IEA

GO:0005776 "autophagic vacuole" evidence=IEA

GO:0031397 "negative regulation of protein ubiquitination" evidence=IEA

GO:0034045 "pre-autophagosomal structure membrane" evidence=IEA

GO:0042311 "vasodilation" evidence=IEA

GO:0042493 "response to drug" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0043687 "post-translational protein modification" evidence=IEA

GO:0048840 "otolith development" evidence=IEA

GO:0055015 "ventricular cardiac muscle cell development" evidence=IEA

GO:0060047 "heart contraction" evidence=IEA

GO:0002218 "activation of innate immune response" evidence=TAS

RGD|1359580 Atg5 "autophagy related 5" [Rattus norvegicus (taxid:10116)]

 Score = 599 (215.9 bits), Expect = 2.6e-71, Sum P(2) = 2.6e-71
 Identities = 108/192 (56%), Positives = 143/192 (74%)

Query:   145 HYPIGLLYDLHVTDNQLPWNITVHFDKFPANEILHCPSREAVESHFMSCIKEADVLKHRS 204
             HYPIGLL+DL  + + LPWNITVHF  FP  ++LHCP ++AVE+HFMSC+KEAD LKH+S
Sbjct:    80 HYPIGLLFDLLASSSALPWNITVHFKSFPEKDLLHCPCKDAVEAHFMSCVKEADALKHKS 139

Query:   205 QIVSNMQKKEHNQLWLGLQNDKFDQFWVINKKLME-PGEGGGFKHIPFRCYQG--DLPFS 261
             Q+++ MQ+K+H QLW+GLQND+FDQFW IN+KLME P E  GF++IPFR YQ   + PF 
Sbjct:   140 QVINEMQRKDHKQLWMGLQNDRFDQFWTINRKLMEYPPEENGFRYIPFRIYQTTTERPFI 199

Query:   262 QCLVKPITNEGNPKTLQNLFEEVYPK-ISIDKCKLNGILVILVHGIAIPLDTPLQWMSEH 320
             Q L +P+  +G   TL +L  EV P  ++ +  +      +++HGI   L+TPLQW+SEH
Sbjct:   200 QKLFRPVAADGQLHTLGDLLREVCPSAVAPEDGEKKS--QVMIHGIEPLLETPLQWLSEH 257

Query:   321 LSYPDNFLHIVV 332
             LSYPDNFLHI +
Sbjct:   258 LSYPDNFLHISI 269

GO:0000045 "autophagic vacuole assembly" evidence=ISO;IMP

GO:0001974 "blood vessel remodeling" evidence=ISO

GO:0002739 "regulation of cytokine secretion involved in immune response" evidence=ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=IEA;ISO

GO:0005776 "autophagic vacuole" evidence=ISO

GO:0006914 "autophagy" evidence=ISO;IMP

GO:0009620 "response to fungus" evidence=ISO

GO:0031397 "negative regulation of protein ubiquitination" evidence=ISO

GO:0034045 "pre-autophagosomal structure membrane" evidence=ISO

GO:0042311 "vasodilation" evidence=ISO

GO:0042493 "response to drug" evidence=ISO

GO:0043066 "negative regulation of apoptotic process" evidence=ISO

GO:0043234 "protein complex" evidence=IDA

GO:0043687 "post-translational protein modification" evidence=ISO

GO:0048840 "otolith development" evidence=ISO

GO:0055015 "ventricular cardiac muscle cell development" evidence=ISO

GO:0060047 "heart contraction" evidence=ISO

UNIPROTKB|Q3MQ04 ATG5 "Autophagy protein 5" [Sus scrofa (taxid:9823)]

 Score = 592 (213.5 bits), Expect = 1.4e-70, Sum P(2) = 1.4e-70
 Identities = 106/192 (55%), Positives = 144/192 (75%)

Query:   145 HYPIGLLYDLHVTDNQLPWNITVHFDKFPANEILHCPSREAVESHFMSCIKEADVLKHRS 204
             HYPIGLL+DL  + + LPWNITVHF  FP  ++LHCPS++ +E+HFMSC+KEAD LKH+S
Sbjct:    80 HYPIGLLFDLLASISALPWNITVHFKSFPEKDLLHCPSKDVIEAHFMSCVKEADALKHKS 139

Query:   205 QIVSNMQKKEHNQLWLGLQNDKFDQFWVINKKLME-PGEGGGFKHIPFRCYQG--DLPFS 261
             +++S+MQ+K+H QLW+GLQND+FDQFW IN+KL+E P E  GF++IPFR YQ   + PF 
Sbjct:   140 RVISDMQRKDHKQLWMGLQNDRFDQFWTINRKLIEYPPEENGFRYIPFRIYQTTTERPFI 199

Query:   262 QCLVKPITNEGNPKTLQNLFEEVYPK-ISIDKCKLNGILVILVHGIAIPLDTPLQWMSEH 320
             Q L +P+  +G   TL +L  EV P  ++ +  +      +++HGI   L+TPLQW+SEH
Sbjct:   200 QKLFRPVAADGQLHTLGDLLREVCPSAVAPEDGEKKS--QVMIHGIEPLLETPLQWLSEH 257

Query:   321 LSYPDNFLHIVV 332
             LSYPDNFLHI +
Sbjct:   258 LSYPDNFLHISI 269

GO:0005737 "cytoplasm" evidence=IEA

GO:0006914 "autophagy" evidence=IEA

UNIPROTKB|F1RVE4 ATG5 "Autophagy protein 5" [Sus scrofa (taxid:9823)]

 Score = 543 (196.2 bits), Expect = 2.0e-65, Sum P(2) = 2.0e-65
 Identities = 98/193 (50%), Positives = 136/193 (70%)

Query:   145 HYPIGLLYDLHVTDNQLPWNITVHFDKFPANEILHCPSREAVESHFMSCIKEADVLKHRS 204
             HYPIGLL+DL  + + LPWNITVHF  FP  ++LHCPS++ +E+HFMSC+KEAD LKH+S
Sbjct:    80 HYPIGLLFDLLASSSALPWNITVHFKSFPEKDLLHCPSKDVIEAHFMSCVKEADALKHKS 139

Query:   205 QIVSNMQKKEHNQLWLGLQNDKFDQFWVINKKLME-PGEGGGFKHIPFRCYQG--DLPFS 261
             Q+++ MQKK+H QLW+GLQN K+  +W  N  L+E P +  G ++IP+  +Q   + PF 
Sbjct:   140 QVINEMQKKDHKQLWMGLQNGKYSSYWTENLNLLEYPSKHQGIRYIPYLVFQTTTERPFI 199

Query:   262 QCLVKPITNEGNPKTLQNLFEEVYPKISI--DKCKLNGILVILVHGIAIPLDTPLQWMSE 319
             Q L +P+ ++G   TL +L +EV P      D  + N +++   HGI   L+TPLQW+SE
Sbjct:   200 QKLFRPVASDGQLHTLGDLLKEVCPSAVAPEDGERKNQVMI---HGIEPMLETPLQWLSE 256

Query:   320 HLSYPDNFLHIVV 332
             HLSYPDNFLHI +
Sbjct:   257 HLSYPDNFLHISI 269

GO:0060047 "heart contraction" evidence=IEA

GO:0055015 "ventricular cardiac muscle cell development" evidence=IEA

GO:0048840 "otolith development" evidence=IEA

GO:0043687 "post-translational protein modification" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0042493 "response to drug" evidence=IEA

GO:0042311 "vasodilation" evidence=IEA

GO:0034045 "pre-autophagosomal structure membrane" evidence=IEA

GO:0031397 "negative regulation of protein ubiquitination" evidence=IEA

GO:0005776 "autophagic vacuole" evidence=IEA

GO:0001974 "blood vessel remodeling" evidence=IEA

GO:0000045 "autophagic vacuole assembly" evidence=IEA

UNIPROTKB|I3LTI9 ATG5 "Autophagy protein 5" [Sus scrofa (taxid:9823)]

 Score = 533 (192.7 bits), Expect = 2.3e-64, Sum P(2) = 2.3e-64
 Identities = 97/193 (50%), Positives = 136/193 (70%)

Query:   145 HYPIGLLYDLHVTDNQLPWNITVHFDKFPANEILHCPSREAVESHFMSCIKEADVLKHRS 204
             HYPIGLL+DL  + + LPWNITVHF  FP  ++LHCPS++ +E+HFMSC+KEAD LKH+S
Sbjct:    80 HYPIGLLFDLLASSSALPWNITVHFKSFPEKDLLHCPSKDVIEAHFMSCVKEADALKHKS 139

Query:   205 QIVSNMQKKEHNQLWLGLQNDKFDQFWVINKKLMEPGE-GGGFKHIPFRCYQG--DLPFS 261
             Q+++ MQKK+H QLW+GLQN +F +FW   KKL++      G +++ F+ Y+   + PF 
Sbjct:   140 QVINEMQKKDHKQLWMGLQNGRFQKFWTGMKKLIQYSPTSNGSRYLAFKIYKTTTERPFI 199

Query:   262 QCLVKPITNEGNPKTLQNLFEEVYPKISI--DKCKLNGILVILVHGIAIPLDTPLQWMSE 319
             Q L +P+ ++G   TL +L +EV P      D  + N +++   HGI   L+TPLQW+SE
Sbjct:   200 QKLFRPVASDGQLHTLGDLLKEVCPSAVAPEDGERKNQVMI---HGIEPMLETPLQWLSE 256

Query:   320 HLSYPDNFLHIVV 332
             HLSYPDNFLHI +
Sbjct:   257 HLSYPDNFLHISI 269

GO:0006914 "autophagy" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9H1Y0	ATG5_HUMAN	No assigned EC number	0.4912	0.7827	0.9563	yes	N/A
Q3MQ24	ATG5_BOVIN	No assigned EC number	0.4878	0.7767	0.9490	yes	N/A
Q3MQ04	ATG5_PIG	No assigned EC number	0.4738	0.7827	0.9563	yes	N/A
Q3MQ06	ATG5_RAT	No assigned EC number	0.4843	0.7827	0.9563	yes	N/A
P0CM36	ATG5_CRYNJ	No assigned EC number	0.2065	0.8095	0.8023	yes	N/A
Q9W3R7	ATG5_DROME	No assigned EC number	0.4551	0.7648	0.9553	yes	N/A
Q5R792	ATG5_PONAB	No assigned EC number	0.4878	0.7827	0.9563	yes	N/A
Q99J83	ATG5_MOUSE	No assigned EC number	0.4912	0.7827	0.9563	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	336
pfam04106	195	pfam04106, APG5, Autophagy protein Apg5	1e-75

>gnl|CDD|217897 pfam04106, APG5, Autophagy protein Apg5

 Score =  230 bits (589), Expect = 1e-75
 Identities = 86/195 (44%), Positives = 126/195 (64%), Gaps = 11/195 (5%)

Query: 145 HYPIGLLYDLHVTDNQ-----LPWNITVHFDKFPANEILHCPSREAVESHFMSCIKEADV 199
           HYP+G+LYDL    +      LPW +TVHF  +P++E++ C S ++V+ HFM+ +KEAD 
Sbjct: 2   HYPVGVLYDLLAGASPLTKSSLPWRLTVHFSDYPSDELIPCDSEDSVKDHFMNSLKEADF 61

Query: 200 LKHR-SQIVSNMQKKEHNQLWLGLQNDKFDQFWVINKKLMEPGEGGGFKHIPFRCYQGDL 258
           L++  S+++ N+ K +  QLW  + N  FD FW IN KLMEP     F+HIP R Y  + 
Sbjct: 62  LRNGTSKVIMNLSKADSKQLWKSVVNHNFDDFWRINNKLMEPP-SSKFRHIPVRIYLPNT 120

Query: 259 -PFSQCLVKPITNEGNPKTLQNLFEEVYPKISIDKCKLNGILVILVHGIAIPLDTPLQWM 317
            P  Q L+ P++ EG P+TL +   E+ P++   + +   +   ++HGI +PLD PLQW+
Sbjct: 121 APVIQALIPPLSEEGQPQTLGDALSELLPELFPSEEE---LAKPIIHGIEVPLDAPLQWL 177

Query: 318 SEHLSYPDNFLHIVV 332
            E+LSYPDNFLHIVV
Sbjct: 178 YENLSYPDNFLHIVV 192

Apg5 is directly required for the import of aminopeptidase I via the cytoplasm-to-vacuole targeting pathway. Length = 195

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	336
KOG2976|consensus	278		100.0
PF04106	197	APG5: Autophagy protein Apg5 ; InterPro: IPR007239	100.0
KOG2976|consensus	278		99.17
cd01611	112	GABARAP Ubiquitin domain of GABA-receptor-associat	95.44
PF02991	104	Atg8: Autophagy protein Atg8 ubiquitin like; Inter	94.61
PTZ00380	121	microtubule-associated protein (MAP); Provisional	93.47
KOG1654|consensus	116		93.16

>KOG2976|consensus

Probab=100.00  E-value=1.5e-77  Score=550.02  Aligned_cols=266  Identities=39%  Similarity=0.685  Sum_probs=239.0

Q ss_pred             hHHHHHHhhCCceeEEEEEecCCcCCCCCCCceEEEecCccchhhhhhhhccccccccccccccccccccccccCCCCCc
Q psy7709          49 DREVLREVWDGKLPVCFTLLADQVSTVGEPDPSYLMVPRLSYFPLVLEKSYPFVGIGTTHVQHCFTSVIHHAIVNKHPAR  128 (336)
Q Consensus        49 ~~ei~~~iW~G~Ipv~i~L~~~e~~~~~~p~p~~~~vPR~SYLpl~~p~i~~~~~~~~~~~~~~F~~~~~~~~~~~~~~~  128 (336)
                      +.|+.|.+|+|.||+||+|+++.. +..+|.|+|+++||.|||++++|.|+       ++    |.++..    .+...+
T Consensus         2 ~~ei~r~vW~G~ip~~itl~~~~~-s~~e~~p~~~~~PR~sYL~l~ip~V~-------~~----fk~~l~----~~~lse   65 (278)
T KOG2976|consen    2 DKEIKRLVWNGEIPVQITLDPDKG-SHREPAPLYILVPRESYLALYIPLVK-------NK----FKSFLS----FEPLSE   65 (278)
T ss_pred             cchHHHHHhCCccceEEEEccCCC-CCCCCcchhhccchHHHHHHHHHHHH-------HH----hhhccC----CCchhH
Confidence            578999999999999999999554 44789999999999999999999999       99    988773    333347


Q ss_pred             cccccccccCCcccccccceeEeeeecCCCC-CCceEEEEecCCCCCCccccCCcHHHHHHHHHHHhhhhhHHhccc-hh
Q psy7709         129 NFFLSRTEALSQSSGRHYPIGLLYDLHVTDN-QLPWNITVHFDKFPANEILHCPSREAVESHFMSCIKEADVLKHRS-QI  206 (336)
Q Consensus       129 ~Wfe~~~~~~g~PLkWh~PiGvLyDl~~~~~-~lPW~Ltlhf~~~P~~~l~~~~~~~~i~~~fmn~lKEA~fi~~Gs-k~  206 (336)
                      +|||    |||+|||||||||||||+++... ..||+|||||+.||.+.|+.|++++++|.+|||||||||||+||| |+
T Consensus        66 ~Wfe----ynG~PLKW~~PvGvLFDlL~~~~~~~~w~i~v~~~~~P~~~i~~~~s~D~~e~~F~~~lKEadyi~ng~sk~  141 (278)
T KOG2976|consen   66 IWFE----YNGTPLKWYIPVGVLFDLLAGSSATFLWNITVRFDSFPPTIILQMESKDQAEAFFFNCLKEADYIKNGSSKA  141 (278)
T ss_pred             Hhhh----cCCcceeeeccHHHHHHHHhcCCcCcceEEEEecCCCCCceecccCCHHHHHHHHHHHHHHHHHHHcCchHH
Confidence            9999    99999999999999999999765 899999999999999999999999999999999999999999998 99


Q ss_pred             hhcccHHHHHHHHHHhHhCChHhHHHHHhhhCCCCCCCCccceeEEEEeC----CCCceecccccc--cCCCCcccHHHH
Q psy7709         207 VSNMQKKEHNQLWLGLQNDKFDQFWVINKKLMEPGEGGGFKHIPFRCYQG----DLPFSQCLVKPI--TNEGNPKTLQNL  280 (336)
Q Consensus       207 im~ls~~d~~~LW~si~~~d~~~f~~in~kL~~~~~~~~~r~IPiRIy~~----~~~~iQ~~v~p~--~~~g~~~TL~d~  280 (336)
                      +|+|||+|++|||.||+||||++||.|++|||...+++.+|+||+|||+.    ...+.|....|.  ..||...|||++
T Consensus       142 i~~msk~e~~~lW~sv~N~~fd~F~~Is~Kl~~s~e~n~~r~IPL~iy~sq~~t~r~f~~~~~~P~~~~~d~~~stlge~  221 (278)
T KOG2976|consen  142 IMNMSKNEARQLWGSVINRNFDDFWEISNKLMESVEDNRSRHIPLRIYTSQVKTARDFRTSLTFPCISQPDGSLSTLGEF  221 (278)
T ss_pred             HHHHhHHHHHHHHHHHhcccHHHHHHHHHHHHhhccccccccceeEeeccccccccchhhccccceeecCchhhhhhhHH
Confidence            99999999999999999999999999999999987778999999999965    346666665553  358999999999


Q ss_pred             HHHhcCCCCccccccCCeeeEEEeeecCCCCCcHHHHHhhCCCCCceEEEEEEe
Q psy7709         281 FEEVYPKISIDKCKLNGILVILVHGIAIPLDTPLQWMSEHLSYPDNFLHIVVNV  334 (336)
Q Consensus       281 L~~~lP~lf~~~~~~~~~~~viihGI~vpld~pL~~L~~~l~~~DgFLhIvv~~  334 (336)
                      |++.+|+.+++..+..+..-|+||||++|+++||.||+++||||||||||++.+
T Consensus       222 l~d~~~~s~~s~d~~~~~~~viihGIei~l~tpL~~l~~~L~ypD~FLHI~ll~  275 (278)
T KOG2976|consen  222 LKDRLPDSLDSKDDINGNDPVIIHGIEIPLHTPLYWLYSNLSYPDGFLHIVLLP  275 (278)
T ss_pred             HHhhcccccCccccccccCceEEecccccccchHHHHHhhccCCCcceEEEEEe
Confidence            999999999877433333338999999999999999999999999999999865

>PF04106 APG5: Autophagy protein Apg5 ; InterPro: IPR007239 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells

Probab=100.00  E-value=7e-68  Score=481.66  Aligned_cols=190  Identities=45%  Similarity=0.909  Sum_probs=141.5

Q ss_pred             cccceeEeeeecCCCCCC-----ceEEEEecCCCCCCccccCCcHHHHHHHHHHHhhhhhHHhccc-hhhhcccHHHHHH
Q psy7709         144 RHYPIGLLYDLHVTDNQL-----PWNITVHFDKFPANEILHCPSREAVESHFMSCIKEADVLKHRS-QIVSNMQKKEHNQ  217 (336)
Q Consensus       144 Wh~PiGvLyDl~~~~~~l-----PW~Ltlhf~~~P~~~l~~~~~~~~i~~~fmn~lKEA~fi~~Gs-k~im~ls~~d~~~  217 (336)
                      ||||||||||+++.....     ||+|||||++||++.+++|++++++|++||||||||||||||| |+||+||++|+++
T Consensus         1 Wh~PiGvLyDl~~~~~~~~~~~~pW~ltlhf~~~P~~~li~~~~~~~~~~~fmn~lKEA~fi~~Gssk~im~Ls~~d~~~   80 (197)
T PF04106_consen    1 WHYPIGVLYDLLTGSDPLSPSLLPWKLTLHFSDYPPDQLIPCESEESIEDHFMNQLKEADFIRNGSSKVIMSLSKKDQKQ   80 (197)
T ss_dssp             SSS-HHHHHHHHHGGG---SS--EEEEEEEEESS--TTS----SSTHHHHHHHHHHHHHHHHHHSSSHHHHTS-HHHHHH
T ss_pred             CCCCceeeeeeccCCCcCcCCCCcEEEEEEeCCCChhheecCCCHHHHHHHHHHHHHHHHHHHhCCHHHHhhcCHHHHHH
Confidence            999999999999975544     9999999999999999999999999999999999999999999 9999999999999


Q ss_pred             HHHHhHhCChHhHHHHHhhhCCCCCCCCccceeEEEEeCCC-CceecccccccCCCCcccHHHHHHHhcCCCCccccccC
Q psy7709         218 LWLGLQNDKFDQFWVINKKLMEPGEGGGFKHIPFRCYQGDL-PFSQCLVKPITNEGNPKTLQNLFEEVYPKISIDKCKLN  296 (336)
Q Consensus       218 LW~si~~~d~~~f~~in~kL~~~~~~~~~r~IPiRIy~~~~-~~iQ~~v~p~~~~g~~~TL~d~L~~~lP~lf~~~~~~~  296 (336)
                      ||+||++|||++||+||+||++.. ++++|+||||||+++. +++|++|+|.+++|++.||||+|+.++|++|++. +..
T Consensus        81 LW~si~~~~~~~f~~i~~kl~~~~-~~~~r~IPiRiy~~~~~~~iQ~~i~~~~~~g~~~TL~d~L~~~lp~~f~s~-~~~  158 (197)
T PF04106_consen   81 LWQSIVNHDFDQFWSINSKLMPPD-PSKFRHIPIRIYLPGSVPVIQPPIPPIKEDGQPQTLGDALSELLPELFPSS-DEP  158 (197)
T ss_dssp             HHHHHHHT-HHHHHHHHHHHS-----SS-SB--EEEEE-SS--EE----B----TT---BTGGGHHHHHTTT--T-----
T ss_pred             HHHHHHHhCHHHHHHHHHHHHhhc-CCCcceeEEEEEeCCCcceEecccccccCCCCcCcHHHHHHHhChhhcccc-cCc
Confidence            999999999999999999999432 3689999999999987 9999999999999999999999999999999765 456


Q ss_pred             CeeeEEEeeecCCCCCcHHHHHhhCCCCCceEEEEEEec
Q psy7709         297 GILVILVHGIAIPLDTPLQWMSEHLSYPDNFLHIVVNVN  335 (336)
Q Consensus       297 ~~~~viihGI~vpld~pL~~L~~~l~~~DgFLhIvv~~~  335 (336)
                      ..++++||||++|+|+||+||+++|+|+||||||||+++
T Consensus       159 ~~~~~iihGI~ipldtpl~~l~~~l~~~D~FLhivv~~~  197 (197)
T PF04106_consen  159 ELARVIIHGIEIPLDTPLQWLYENLSYPDGFLHIVVRMM  197 (197)
T ss_dssp             --EEEEETTEEE-TTSBHHHHHHHH--TTS-EEEEEE--
T ss_pred             cccEEEEeCeeCCCCCcHHHHHHHccCCCCeEEEEEEeC
Confidence            788999999999999999999999999999999999874

In yeast, 15 Apg proteins coordinate the formation of autophagosomes. No molecule involved in autophagy has yet been identified in higher eukaryotes []. The pre-autophagosomal structure contains at least five Apg proteins: Apg1p, Apg2p, Apg5p, Aut7p/Apg8p and Apg16p. It is found in the vacuole []. The C-terminal glycine of Apg12p is conjugated to a lysine residue of Apg5p via an isopeptide bond. During autophagy, cytoplasmic components are enclosed in autophagosomes and delivered to lysosomes/vacuoles. Auotphagy protein 16 (Apg16) has been shown to be bind to Apg5 and is required for the function of the Apg12p-Apg5p conjugate []. Autophagy protein 5 (Apg5) is directly required for the import of aminopeptidase I via the cytoplasm-to-vacuole targeting pathway []. This entry represents autophagy protein 5 (Apg5).; GO: 0006914 autophagy, 0005737 cytoplasm; PDB: 2DYM_G 2DYO_A.

>KOG2976|consensus

Probab=99.17  E-value=1.6e-11  Score=114.21  Aligned_cols=56  Identities=34%  Similarity=0.670  Sum_probs=51.2

Q ss_pred             chHHHHHhhcCCCcceEEEeecCcccccCCCCCeeeeecchhhhhhhHHHHHHhhCC
Q psy7709           3 SDREVLREVWDGKLPVCFTLLADQVSTVGEPDPSYLMVPRYVWILLDREVLREVWDG   59 (336)
Q Consensus         3 ~~~e~~~~~w~g~ip~~~~l~~~e~~~~~~~~p~~~~~pr~~yl~l~~ei~~~iW~G   59 (336)
                      +|+|+.|.||+|+||+||+|++++. +.++|.|+|+|+||.|||++..+..+..+..
T Consensus         1 m~~ei~r~vW~G~ip~~itl~~~~~-s~~e~~p~~~~~PR~sYL~l~ip~V~~~fk~   56 (278)
T KOG2976|consen    1 MDKEIKRLVWNGEIPVQITLDPDKG-SHREPAPLYILVPRESYLALYIPLVKNKFKS   56 (278)
T ss_pred             CcchHHHHHhCCccceEEEEccCCC-CCCCCcchhhccchHHHHHHHHHHHHHHhhh
Confidence            4899999999999999999999665 7789999999999999999998888888776

>cd01611 GABARAP Ubiquitin domain of GABA-receptor-associated protein

Probab=95.44  E-value=0.12  Score=43.51  Aligned_cols=75  Identities=19%  Similarity=0.221  Sum_probs=50.8

Q ss_pred             cceeEEEEeCC---CCceec---ccccccCCCCcccHHHH---HHHhcCCCCccccccCCeeeEEEeeecCCCCCcHHHH
Q psy7709         247 KHIPFRCYQGD---LPFSQC---LVKPITNEGNPKTLQNL---FEEVYPKISIDKCKLNGILVILVHGIAIPLDTPLQWM  317 (336)
Q Consensus       247 r~IPiRIy~~~---~~~iQ~---~v~p~~~~g~~~TL~d~---L~~~lP~lf~~~~~~~~~~~viihGI~vpld~pL~~L  317 (336)
                      .+|||.+-...   .+.+..   +|+      ...|++++   |+..+. +-+     .....+.|++..++.++-+..|
T Consensus        23 ~~iPVIvE~~~~~~~p~l~k~KflVp------~~~tv~~f~~~irk~l~-l~~-----~~slfl~Vn~~~p~~~~~~~~l   90 (112)
T cd01611          23 DRIPVIVERYPKSDLPDLDKKKYLVP------SDLTVGQFVYIIRKRIQ-LRP-----EKALFLFVNNSLPPTSATMSQL   90 (112)
T ss_pred             CceEEEEEEcCCCCcccccCceEEec------CCCCHHHHHHHHHHHhC-CCc-----cceEEEEECCccCCchhHHHHH
Confidence            57999988642   222222   233      23566655   455553 322     2345688889878999999999


Q ss_pred             HhhCCCCCceEEEEEE
Q psy7709         318 SEHLSYPDNFLHIVVN  333 (336)
Q Consensus       318 ~~~l~~~DgFLhIvv~  333 (336)
                      |++++-.||||||...
T Consensus        91 Y~~~kd~DGfLyl~Ys  106 (112)
T cd01611          91 YEEHKDEDGFLYMTYS  106 (112)
T ss_pred             HHHhCCCCCEEEEEEe
Confidence            9999999999999865

GABARAP (GABA-receptor-associated protein) belongs ot a large family of proteins that mediate intracellular membrane trafficking and/or fusion. GABARAP binds not only to GABA, type A but also to tubulin, gephrin, and ULK1. Orthologues of GABARAP include Gate-16 (golgi-associated ATPase enhancer), LC3 (microtubule-associated protein light chain 3), and ATG8 (autophagy protein 8). ATG8 is a ubiquitin-like protein that is conjugated to the membrane phospholipid, phosphatidylethanolamine as part of a ubiquitin-like conjugation system essential for autophagosome-formation.

>PF02991 Atg8: Autophagy protein Atg8 ubiquitin like; InterPro: IPR004241 Autophagy is generally known as a process involved in the degradation of bulk cytoplasmic components that are non-specifically sequestered into an autophagosome, where they are sequestered into double-membrane vesicles and delivered to the degradative organelle, the lysosome/vacuole, for breakdown and eventual recycling of the resulting macromolecules

Probab=94.61  E-value=0.07  Score=44.29  Aligned_cols=75  Identities=17%  Similarity=0.171  Sum_probs=49.1

Q ss_pred             cceeEEEEeCC-C--Cceec---ccccccCCCCcccHHHHHHHh---cCCCCccccccCCeeeEEEeeecCCCCCcHHHH
Q psy7709         247 KHIPFRCYQGD-L--PFSQC---LVKPITNEGNPKTLQNLFEEV---YPKISIDKCKLNGILVILVHGIAIPLDTPLQWM  317 (336)
Q Consensus       247 r~IPiRIy~~~-~--~~iQ~---~v~p~~~~g~~~TL~d~L~~~---lP~lf~~~~~~~~~~~viihGI~vpld~pL~~L  317 (336)
                      .+|||.+--.. .  +.++.   ++|      ...|+++++..+   +. +-     ......+.++|.-++.++.+.++
T Consensus        15 ~~IPVIvEr~~~s~lp~ldk~KfLvp------~~~tv~qf~~~ir~rl~-l~-----~~~alfl~Vn~~lp~~s~tm~el   82 (104)
T PF02991_consen   15 DKIPVIVERYPKSKLPDLDKKKFLVP------KDLTVGQFVYIIRKRLQ-LS-----PEQALFLFVNNTLPSTSSTMGEL   82 (104)
T ss_dssp             TEEEEEEEE-TTSSS---SSSEEEEE------TTSBHHHHHHHHHHHTT--------TTS-EEEEBTTBESSTTSBHHHH
T ss_pred             CccEEEEEEccCCChhhcCccEEEEc------CCCchhhHHHHhhhhhc-CC-----CCceEEEEEcCcccchhhHHHHH
Confidence            47999998652 2  22221   233      246888877543   32 11     12345688999888999999999


Q ss_pred             HhhCCCCCceEEEEEE
Q psy7709         318 SEHLSYPDNFLHIVVN  333 (336)
Q Consensus       318 ~~~l~~~DgFLhIvv~  333 (336)
                      |+..+..|||||+...
T Consensus        83 Y~~~kdeDGFLY~~Ys   98 (104)
T PF02991_consen   83 YEKYKDEDGFLYMTYS   98 (104)
T ss_dssp             HHHHB-TTSSEEEEEE
T ss_pred             HHHhCCCCCeEEEEec
Confidence            9999999999999754

The yeast proteins are involved in the autophagosome, and Atg8 binds Atg19, via its N terminus and the C terminus of Atg19. Light chain 3 is proposed to function primarily as a subunit of microtubule associated proteins 1A and 1B and that its expression may regulate microtubule binding activity [] Related proteins that belong to this group include the human ganglioside expression factor and a symbiosis-related fungal protein.; PDB: 3ECI_A 3D32_B 1GNU_A 1KM7_A 1KLV_A 1KOT_A 3DOW_A 1KJT_A 1V49_A 2ZJD_C ....

>PTZ00380 microtubule-associated protein (MAP); Provisional

Probab=93.47  E-value=0.38  Score=41.08  Aligned_cols=75  Identities=15%  Similarity=0.187  Sum_probs=51.5

Q ss_pred             cceeEEEEeCC-CCceecc-cccccCCCCcccHHHHHHHh---cCCCCccccccCCeeeEEEeeecCCCCCcHHHHHhhC
Q psy7709         247 KHIPFRCYQGD-LPFSQCL-VKPITNEGNPKTLQNLFEEV---YPKISIDKCKLNGILVILVHGIAIPLDTPLQWMSEHL  321 (336)
Q Consensus       247 r~IPiRIy~~~-~~~iQ~~-v~p~~~~g~~~TL~d~L~~~---lP~lf~~~~~~~~~~~viihGI~vpld~pL~~L~~~l  321 (336)
                      .+|||.+--.. ..--|.. .-|     ...|+|++...+   +. +-     ... ..+.++++.+|.++.+..||+..
T Consensus        26 drIPVIvEk~~~s~dK~KfllVP-----~d~tV~qF~~iIRkrl~-l~-----~~k-~flfVnn~lp~~s~~mg~lYe~~   93 (121)
T PTZ00380         26 GHVAVVVEAAEKAGSKVHFLALP-----RDATVAELEAAVRQALG-TS-----AKK-VTLAIEGSTPAVTATVGDIADAC   93 (121)
T ss_pred             CccEEEEeecCCCCCceEEEEcC-----CCCcHHHHHHHHHHHcC-CC-----hhH-EEEEECCccCCccchHHHHHHHh
Confidence            47999987652 1222222 133     347888886443   32 21     122 57888998889999999999999


Q ss_pred             CCCCceEEEEEE
Q psy7709         322 SYPDNFLHIVVN  333 (336)
Q Consensus       322 ~~~DgFLhIvv~  333 (336)
                      +.-||||||+..
T Consensus        94 KDeDGFLYi~Ys  105 (121)
T PTZ00380         94 KRDDGFLYVSVR  105 (121)
T ss_pred             cCCCCeEEEEEc
Confidence            999999999753

>KOG1654|consensus

Probab=93.16  E-value=0.41  Score=40.17  Aligned_cols=75  Identities=19%  Similarity=0.264  Sum_probs=53.2

Q ss_pred             cceeEEEEeCC---CCceec---ccccccCCCCcccHHHHHHHhcC--CCCccccccCCeeeEEEeeecCCCCCcHHHHH
Q psy7709         247 KHIPFRCYQGD---LPFSQC---LVKPITNEGNPKTLQNLFEEVYP--KISIDKCKLNGILVILVHGIAIPLDTPLQWMS  318 (336)
Q Consensus       247 r~IPiRIy~~~---~~~iQ~---~v~p~~~~g~~~TL~d~L~~~lP--~lf~~~~~~~~~~~viihGI~vpld~pL~~L~  318 (336)
                      -+|||.+--.+   .+.+-.   +||      ...|+|++..-+=-  .|-+     .....+.++|..+|-.+++..+|
T Consensus        27 ~riPVIvEk~~~~~lp~lDK~KyLVP------~dltvgqfi~iIRkRiqL~~-----~kA~flfVn~~~p~ts~~ms~~Y   95 (116)
T KOG1654|consen   27 DRIPVIVEKAGKSQLPDLDKKKYLVP------DDLTVGQFIKIIRKRIQLSP-----EKAFFLFVNNTSPPTSATMSALY   95 (116)
T ss_pred             CCCcEEEEecccccCcccccceeecc------ccccHHHHHHHHHHHhccCh-----hHeEEEEEcCcCCcchhhHHHHH
Confidence            46899887432   244433   344      23899998754311  1211     23568999999999999999999


Q ss_pred             hhCCCCCceEEEEE
Q psy7709         319 EHLSYPDNFLHIVV  332 (336)
Q Consensus       319 ~~l~~~DgFLhIvv  332 (336)
                      +.-+--|||||++-
T Consensus        96 e~~kdeDgFLYm~Y  109 (116)
T KOG1654|consen   96 EEEKDEDGFLYMTY  109 (116)
T ss_pred             HhhcccCcEEEEEe
Confidence            99999999999974

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	336
4gdk_B	275	Crystal Structure Of Human Atg12~atg5 Conjugate In		3e-74

>pdb|4GDK|B Chain B, Crystal Structure Of Human Atg12~atg5 Conjugate In Complex With An N- Terminal Fragment Of Atg16l1 Length = 275

Iteration: 1
 Score =  275 bits (702), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 141/287 (49%), Positives = 192/287 (66%), Gaps = 24/287 (8%)
Query: 49  DREVLREVWDGKLPVCFTLLADQVSTVGEPDPSYLMVPRLSYFPLVLEKSYPFVGIGTTH 108
           D++VLR+VW G++P CFTL  D++ T  E +P YL++PR+SY  LV +K           
Sbjct: 4   DKDVLRDVWFGRIPTCFTLYQDEI-TEREAEPYYLLLPRVSYLTLVTDK----------- 51
Query: 109 VQHCFTSVIHHAIVNKHPARNFFLSRTEALSQSSGRHYPIGLLYDLHVTDNQLPWNITVH 168
           V+  F  V+    +++     +F      L      HYPIGLL+DL  + + LPWNITVH
Sbjct: 52  VKKHFQKVMRQEDISE----IWFEYEGTPLKW----HYPIGLLFDLLASSSALPWNITVH 103
Query: 169 FDKFPANEILHCPSREAVESHFMSCIKEADVLKHRSQIVSNMQKKEHNQLWLGLQNDKFD 228
           F  FP  ++LHCPS++A+E+HFMSC+KEAD LKH+SQ+++ MQKK+H QLW+GLQND+FD
Sbjct: 104 FKSFPEKDLLHCPSKDAIEAHFMSCMKEADALKHKSQVINEMQKKDHKQLWMGLQNDRFD 163
Query: 229 QFWVINKKLME-PGEGGGFKHIPFRCYQ--GDLPFSQCLVKPITNEGNPKTLQNLFEEVY 285
           QFW IN+KLME P E  GF++IPFR YQ   + PF Q L +P+  +G   TL +L +EV 
Sbjct: 164 QFWAINRKLMEYPAEENGFRYIPFRIYQTTTERPFIQKLFRPVAADGQLHTLGDLLKEVC 223
Query: 286 PKISIDKCKLNGILVILVHGIAIPLDTPLQWMSEHLSYPDNFLHIVV 332
           P  +ID         +++HGI   L+TPLQW+SEHLSYPDNFLHI +
Sbjct: 224 PS-AIDPEDGEKKNQVMIHGIEPMLETPLQWLSEHLSYPDNFLHISI 269

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	336
3vqi_A	274	ATG5; autophagy, E3-like, ubiquitin-fold, PRE-auto	2e-73
2dyo_A	297	Autophagy protein 5; ubiquitin-fold, herix-bundle,	5e-63

>3vqi_A ATG5; autophagy, E3-like, ubiquitin-fold, PRE-autoph structure, protein turnover, protein transport; HET: EPE; 2.50A {Kluyveromyces marxianus} Length = 274

 Score =  227 bits (580), Expect = 2e-73
 Identities = 45/299 (15%), Positives = 103/299 (34%), Gaps = 44/299 (14%)

Query: 49  DREVLREVWDGKLPVCFTLLADQV--STVGEPDPSYLMVPRLSYFPLVLEKSYPFVGIGT 106
             E+   VW+G + V   +    V  +T       ++++ R +Y    L           
Sbjct: 4   MEELRERVWNGTINVEVVVSDAIVVPNTTLADKSCHIVMLRDAYLGFYLPTVVRK----- 58

Query: 107 THVQHCFTSVIHHAIVNKHPARNFFLSRTEALSQSSGRHYPIGLLYDLHVTDNQ------ 160
                     I     + +    F     E   +     YP G+L+DL     +      
Sbjct: 59  ------LADTIKVPYESDYRNWWF-----EYNGEGVPWEYPCGVLFDLLNKKRKKQGNEL 107

Query: 161 -----LPWNITV-HFDKFPANEILHCPSREAVESHFMSCIKEAD-VLKHRSQIVSNMQKK 213
                  W + + H DK+P   +        ++ ++    K+A  +L   ++ + ++   
Sbjct: 108 DDTSLQMWELQLCHGDKYPRGILPLVDGHSQIKDYWRHQWKQACFILNGSAKRIMSLSIP 167

Query: 214 EHNQLWLGLQNDKFDQFWVINKKLMEPGEGGGFKHIPFRCYQGDLPFSQCLVKPITNEGN 273
           +    W+ + +     F  +  KL    +    K +P R +  +    Q  V     E  
Sbjct: 168 DFENFWVSILSRNRSDFMAVRSKLFSMNK---AKSLPVRVWTSNYAVLQPTVPVTDKEL- 223

Query: 274 PKTLQNLFEEVYPKISIDKCKLNGILVILVHGIAIPLDTPLQWMSEHLSYPDNFLHIVV 332
             ++  L + +           +G+  +++ GI + ++  +  + +  +  D FL++V 
Sbjct: 224 --SVAELLDSIKLS-------SDGVKSVIIQGIDVSIEDNIFELYDIFASIDGFLYLVT 273

>2dyo_A Autophagy protein 5; ubiquitin-fold, herix-bundle, protein turnover/protein turnover complex; 1.97A {Saccharomyces cerevisiae} PDB: 2dym_A Length = 297

 Score =  201 bits (512), Expect = 5e-63
 Identities = 55/350 (15%), Positives = 111/350 (31%), Gaps = 86/350 (24%)

Query: 2   ASDREVLREVWDGKLPVCFTLLADQV--STVGEPDPSYLMVPRYVWILLDREVLREVWDG 59
           A   ++ + +W+G+L V  ++    +   +  E     + VPR                 
Sbjct: 2   AHMNDIKQLLWNGELNVLVSIDPSFLMKGSPREIAVLRIRVPRE---------------- 45

Query: 60  KLPVCFTLLADQVSTVGEPDPSYLMVPRLSYFPLVLEKSYPFVGIGTTHVQHCFTSVIHH 119
                                +YL+    +Y PL+  K                 S +  
Sbjct: 46  ---------------------TYLV----NYMPLIWNK---------------IKSFLSF 65

Query: 120 AIVNKHPARNFFLSRTEALSQSSGRHYPIGLLYDLHVTDNQ------------LPWNITV 167
             +       +F      +      +YP+G+L+D     +             +   + +
Sbjct: 66  DPLTDSEKYFWFEHNKTPIPW----NYPVGVLFDCLAGKSATFTTSFENQVKDVLTFLRI 121

Query: 168 HF---DKFPANEILHCPSREAVESHFMSCIKEAD-VLKHRSQIVSNMQKKEHNQLWLGLQ 223
           H    D  P   I    S+   E  +    K+   +L   S+ + ++   E  + W  + 
Sbjct: 122 HLVMGDSLPPTIIPIASSKTQAEKFWFHQWKQVCFILNGSSKAIMSLSVNEARKFWGSVI 181

Query: 224 NDKFDQFWVINKKLMEPGEGGGFKHIPFRCYQGDLPFSQCLVKP-ITNEGNPKTLQNLFE 282
              F  F  I+ K+         +HIP          +  + +P I+  G   TL+++  
Sbjct: 182 TRNFQDFIEISNKISSS----RPRHIPLIIQTSRTSGTFRISQPTISMTGVNPTLKDIEG 237

Query: 283 EVYPKISIDKCKLNGILVILVHGIAIPLDTPLQWMSEHLSYPDNFLHIVV 332
           ++              ++++  GI IP    L  +   L   D FL+I +
Sbjct: 238 DILDVKEGINGND---VMVICQGIEIPWHMLLYDLYSKLRSFDGFLYITL 284

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	336
4gdk_B	275	Autophagy protein 5; protein-protein conjugate, pr	100.0
3vqi_A	274	ATG5; autophagy, E3-like, ubiquitin-fold, PRE-auto	100.0
2dyo_A	297	Autophagy protein 5; ubiquitin-fold, herix-bundle,	100.0
4gdk_B	275	Autophagy protein 5; protein-protein conjugate, pr	99.46
2dyo_A	297	Autophagy protein 5; ubiquitin-fold, herix-bundle,	99.22
3vqi_A	274	ATG5; autophagy, E3-like, ubiquitin-fold, PRE-auto	99.15
2r2q_A	110	Gamma-aminobutyric acid receptor-associated protei	98.55
1eo6_A	117	GATE-16, golgi-associated ATPase enhancer of 16 KD	98.29
3h9d_A	119	ATG8, microtubule-associated protein 1A/1B, light	95.86
3rui_B	118	Autophagy-related protein 8; autophagosome formati	95.82
1wz3_A	96	Autophagy 12B, ATG12B, APG12B; ubiquitin-fold, pla	95.54
3m95_A	125	Autophagy related protein ATG8; alpha slash beta,	95.21
2zjd_A	130	Microtubule-associated proteins 1A/1B light chain	94.68
4gdk_A	91	Ubiquitin-like protein ATG12; protein-protein conj	90.14
3w1s_C	91	Ubiquitin-like protein ATG12; ubiquitin fold, E3-l	85.19

>4gdk_B Autophagy protein 5; protein-protein conjugate, protein-protein complex, ubiquiti protein, E3 ligase, ubiquitin-like fold; 2.70A {Homo sapiens} PDB: 4gdl_B

Probab=100.00  E-value=1.5e-91  Score=663.04  Aligned_cols=270  Identities=50%  Similarity=0.954  Sum_probs=247.7

Q ss_pred             hhhhHHHHHHhhCCceeEEEEEecCCcCCCCCCCceEEEecCccchhhhhhhhccccccccccccccccccccccccCCC
Q psy7709          46 ILLDREVLREVWDGKLPVCFTLLADQVSTVGEPDPSYLMVPRLSYFPLVLEKSYPFVGIGTTHVQHCFTSVIHHAIVNKH  125 (336)
Q Consensus        46 l~l~~ei~~~iW~G~Ipv~i~L~~~e~~~~~~p~p~~~~vPR~SYLpl~~p~i~~~~~~~~~~~~~~F~~~~~~~~~~~~  125 (336)
                      |+.+.||+|++|+|+|||||+|+++|++. .+|.|||+++||+||||+++|+|+       +|    |.+++.    .+.
T Consensus         1 m~~d~ei~r~vW~G~Ipv~i~l~~~e~~~-~~~~p~~~~vPR~sYLpl~~p~i~-------~~----F~~~~~----~~~   64 (275)
T 4gdk_B            1 MTDDKDVLRDVWFGRIPTCFTLYQDEITE-REAEPYYLLLPRVSYLTLVTDKVK-------KH----FQKVMR----QED   64 (275)
T ss_dssp             --CHHHHHHHHHTCEEEEEEEECTTSCCS-SCCCCEEEEEETTSCHHHHCHHHH-------HH----HHTTSC----GGG
T ss_pred             CCchHHHHHHHhCCCceEEEEECcccccc-CCCCcEEEEcchhhHHHHHHHHHH-------HH----HHhhcc----ccc
Confidence            46799999999999999999999999976 468899999999999999999999       99    988773    224


Q ss_pred             CCccccccccccCCcccccccceeEeeeecCCCCCCceEEEEecCCCCCCccccCCcHHHHHHHHHHHhhhhhHHhccch
Q psy7709         126 PARNFFLSRTEALSQSSGRHYPIGLLYDLHVTDNQLPWNITVHFDKFPANEILHCPSREAVESHFMSCIKEADVLKHRSQ  205 (336)
Q Consensus       126 ~~~~Wfe~~~~~~g~PLkWh~PiGvLyDl~~~~~~lPW~Ltlhf~~~P~~~l~~~~~~~~i~~~fmn~lKEA~fi~~Gsk  205 (336)
                      .+++|||    |||+|||||||||||||+++++..+||+|||||++||++.|++|++++++|++||||||||||+|||||
T Consensus        65 ~~~~Wfe----~eg~PLkWh~PiGvLyDl~~~~~~lPW~Ltvhf~~~P~~~l~~~~~~~~i~~~fmn~lKEAd~ir~~sk  140 (275)
T 4gdk_B           65 ISEIWFE----YEGTPLKWHYPIGLLFDLLASSSALPWNITVHFKSFPEKDLLHCPSKDAIEAHFMSCMKEADALKHKSQ  140 (275)
T ss_dssp             CCCCEEE----ETTEECCTTSCHHHHHHHHHTTSCSSEEEEEECSSCCTTTCCCCCCHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             cCCccEe----ECCEEeccccccEEEEEecCCCCCCCeEEEEEcCCCCccccccCCcHHHHHHHHHHHHHHHHHHhcCCH
Confidence            5789999    999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhcccHHHHHHHHHHhHhCChHhHHHHHhhhCCCC-CCCCccceeEEEEeC--CCCceecccccccCCCCcccHHHHHH
Q psy7709         206 IVSNMQKKEHNQLWLGLQNDKFDQFWVINKKLMEPG-EGGGFKHIPFRCYQG--DLPFSQCLVKPITNEGNPKTLQNLFE  282 (336)
Q Consensus       206 ~im~ls~~d~~~LW~si~~~d~~~f~~in~kL~~~~-~~~~~r~IPiRIy~~--~~~~iQ~~v~p~~~~g~~~TL~d~L~  282 (336)
                      +||+||++||++||+||++|||++||+||+||+++. +++.+|+||||||++  +.+++|++|+|.+++|+++||||+|+
T Consensus       141 ~im~lsk~d~~~LW~sv~~~d~~~F~~in~kL~~~~~~~~~~r~IPvRiY~~~~~~~~iQ~~v~p~~~~g~~~TLg~~L~  220 (275)
T 4gdk_B          141 VINEMQKKDHKQLWMGLQNDRFDQFWAINRKLMEYPAEENGFRYIPFRIYQTTTERPFIQKLFRPVAADGQLHTLGDLLK  220 (275)
T ss_dssp             TTTSSCHHHHHHHHHHHHTTCHHHHHHHHTGGGCCCTTSSSCSSCCEEEECTTSSSSEECCCCCSBCTTSCBCBHHHHHH
T ss_pred             HhhhcCHHHHHHHHHHHHcCCHHHHHHHHHhhcCCCCccCccccceEEEEecCCCCCccccCcCCcCCCCCcccHHHHHH
Confidence            999999999999999999999999999999999853 456899999999987  46899999999999999999999999


Q ss_pred             HhcCCCCccccccCCeeeEEEeeecCCCCCcHHHHHhhCCCCCceEEEEEEecC
Q psy7709         283 EVYPKISIDKCKLNGILVILVHGIAIPLDTPLQWMSEHLSYPDNFLHIVVNVNS  336 (336)
Q Consensus       283 ~~lP~lf~~~~~~~~~~~viihGI~vpld~pL~~L~~~l~~~DgFLhIvv~~~~  336 (336)
                      +++|++|+++ +++..+++++|||++|+|+||+||+++|+|+||||||||+..+
T Consensus       221 ~~lP~lf~~~-~~~~~~~viihGI~~pl~~pl~~l~~~l~y~DgFLhI~v~~~~  273 (275)
T 4gdk_B          221 EVCPSAIDPE-DGEKKNQVMIHGIEPMLETPLQWLSEHLSYPDNFLHISIIPQP  273 (275)
T ss_dssp             HHCGGGCC-------CEEEEBTTBCCCTTSBHHHHHHHSCCTTSCEEEEEEECC
T ss_pred             HhcccccCCC-cccccceEEEeCCcCCCCCCHHHHHHhccCCCceEEEEEEeCC
Confidence            9999999875 4556899999999999999999999999999999999998653

>3vqi_A ATG5; autophagy, E3-like, ubiquitin-fold, PRE-autoph structure, protein turnover, protein transport; HET: EPE; 2.50A {Kluyveromyces marxianus}

Probab=100.00  E-value=3.3e-86  Score=626.41  Aligned_cols=257  Identities=16%  Similarity=0.304  Sum_probs=228.8

Q ss_pred             hhhHHHHHHhhCCceeEEEEEecCCcCCC--CCCCceEEEecCccchhhhhhhhccccccccccccccccccccccccCC
Q psy7709          47 LLDREVLREVWDGKLPVCFTLLADQVSTV--GEPDPSYLMVPRLSYFPLVLEKSYPFVGIGTTHVQHCFTSVIHHAIVNK  124 (336)
Q Consensus        47 ~l~~ei~~~iW~G~Ipv~i~L~~~e~~~~--~~p~p~~~~vPR~SYLpl~~p~i~~~~~~~~~~~~~~F~~~~~~~~~~~  124 (336)
                      |.+.|++|++|+|+|||||+|+++|+++.  .+|+|||+++||+||||+++|+|+       +|    |.+++..++ .+
T Consensus         2 ~~~~ei~~~vW~G~Ipv~i~l~~~e~~~~~~~~~~p~~~~vPR~SYLpl~~p~i~-------~~----F~~~~~~~~-~~   69 (274)
T 3vqi_A            2 PHMEELRERVWNGTINVEVVVSDAIVVPNTTLADKSCHIVMLRDAYLGFYLPTVV-------RK----LADTIKVPY-ES   69 (274)
T ss_dssp             --CCHHHHHHHTCEEEEEEEECTTTBCSSCCTGGGEEEEEEETTSCHHHHHHHHH-------HH----HGGGBCSCC-SC
T ss_pred             CcHHHHHHHHhCCCceEEEEEChHHhcccCCCCCCcEEEEcchHhHHHHHHHHHH-------HH----HHhhccccc-cc
Confidence            45789999999999999999999999764  468999999999999999999999       99    988874221 12


Q ss_pred             CCCccccccccccCCcccccccceeEeeeecCCCC-----------CCceEEEEecCC-CCCCcccc-CCcHHHHHHHHH
Q psy7709         125 HPARNFFLSRTEALSQSSGRHYPIGLLYDLHVTDN-----------QLPWNITVHFDK-FPANEILH-CPSREAVESHFM  191 (336)
Q Consensus       125 ~~~~~Wfe~~~~~~g~PLkWh~PiGvLyDl~~~~~-----------~lPW~Ltlhf~~-~P~~~l~~-~~~~~~i~~~fm  191 (336)
                      ..+++|||    |||+|||||||||||||++++..           .+||+|||||++ ||++ +++ |++++++|++||
T Consensus        70 ~~~~~WFe----~eg~PLkWh~PiGvLyDl~~~~~~~~~~~~~~~~~lpW~Ltvh~~~~~P~~-li~~~~~~~~i~~~fm  144 (274)
T 3vqi_A           70 DYRNWWFE----YNGEGVPWEYPCGVLFDLLNKKRKKQGNELDDTSLQMWELQLCHGDKYPRG-ILPLVDGHSQIKDYWR  144 (274)
T ss_dssp             SSTTEEEE----ETTEECCTTSCHHHHHHHHCC--------------CEEEEEEEECSSCCTT-CCCCCSHHHHHHHHHH
T ss_pred             ccCcccEE----ECCEeccccccceEEEEeccCCCcccccccccCCCCCEEEEEEeCCCCCcc-ccccCCcHHHHHHHHH
Confidence            36789999    99999999999999999998654           789999999998 9999 665 799999999999


Q ss_pred             HHhhhhhHHhccc-hhhhcccHHHHHHHHHHhHhCChHhHHHHHhhhCCCCCCCCccceeEEEEeCCCCceecccccccC
Q psy7709         192 SCIKEADVLKHRS-QIVSNMQKKEHNQLWLGLQNDKFDQFWVINKKLMEPGEGGGFKHIPFRCYQGDLPFSQCLVKPITN  270 (336)
Q Consensus       192 n~lKEA~fi~~Gs-k~im~ls~~d~~~LW~si~~~d~~~f~~in~kL~~~~~~~~~r~IPiRIy~~~~~~iQ~~v~p~~~  270 (336)
                      ||||||||||||| |+||+||++|+++||+||++|||++||+||+||+++.   ++|+||||||+++.+++|.+|+|.+ 
T Consensus       145 n~lKEAdfir~Gsak~im~lsk~d~~~LW~sv~~~~~~~F~~i~~kL~~~~---~~r~IPiRIy~~~~~~iQ~~i~~~~-  220 (274)
T 3vqi_A          145 HQWKQACFILNGSAKRIMSLSIPDFENFWVSILSRNRSDFMAVRSKLFSMN---KAKSLPVRVWTSNYAVLQPTVPVTD-  220 (274)
T ss_dssp             HHHHHHHHHHHSBSCTTTTSCHHHHHHHHHHHHHTCHHHHHHHHHTTCCGG---GCSBCCEEEECTTSCEECCCCBCC--
T ss_pred             HHHHHHHHHHhCChHHhhccCHHHHHHHHHHHHHhcHHHHHHHHHHhcCCC---cccceeEEEEcCCCCeEecccCCCC-
Confidence            9999999999998 9999999999999999999999999999999999432   6899999999999999999999864 


Q ss_pred             CCCcccHHHHHHHhcCCCCccccccCCeeeEEEeeecCCCCCcHHHHHhhCCCCCceEEEEEE
Q psy7709         271 EGNPKTLQNLFEEVYPKISIDKCKLNGILVILVHGIAIPLDTPLQWMSEHLSYPDNFLHIVVN  333 (336)
Q Consensus       271 ~g~~~TL~d~L~~~lP~lf~~~~~~~~~~~viihGI~vpld~pL~~L~~~l~~~DgFLhIvv~  333 (336)
                        +++||||+|++++|++|       ..+++++|||++|+++||+|||++|+|+||||||||+
T Consensus       221 --~~~TLg~~L~~~lp~l~-------~~~~~iihGi~vp~~~pl~~l~~~~~y~DgFLhivi~  274 (274)
T 3vqi_A          221 --KELSVAELLDSIKLSSD-------GVKSVIIQGIDVSIEDNIFELYDIFASIDGFLYLVTK  274 (274)
T ss_dssp             ----CBHHHHHHTTTCCC---------CCEEEETTEEEETTSBHHHHHHHHCCTTSCEEEECC
T ss_pred             --ccccHHHHHHHhccccc-------cceEEEEeCccCCCCCcHHHHHHHccCCCceEEEEeC
Confidence              88999999999999887       4789999999999999999999999999999999873

>2dyo_A Autophagy protein 5; ubiquitin-fold, herix-bundle, protein turnover/protein turnover complex; 1.97A {Saccharomyces cerevisiae} PDB: 2dym_A

Probab=100.00  E-value=9.3e-84  Score=615.76  Aligned_cols=260  Identities=18%  Similarity=0.254  Sum_probs=226.5

Q ss_pred             hhHHHHHHhhCCceeEEEEEecCCcCCCCCCCc---eEEEecCccchhhhhhhhccccccccccccccccccccccccCC
Q psy7709          48 LDREVLREVWDGKLPVCFTLLADQVSTVGEPDP---SYLMVPRLSYFPLVLEKSYPFVGIGTTHVQHCFTSVIHHAIVNK  124 (336)
Q Consensus        48 l~~ei~~~iW~G~Ipv~i~L~~~e~~~~~~p~p---~~~~vPR~SYLpl~~p~i~~~~~~~~~~~~~~F~~~~~~~~~~~  124 (336)
                      -+.+|+|++|+|+|||+|+|++++++. ++|+|   ||+++||+||||+++|+|+       +|    |.+++..+....
T Consensus         3 ~~~~i~r~vW~G~IPv~i~L~~~~~~~-~~p~p~~~~~~~vPR~SYLpl~~p~v~-------~~----F~~~l~~~~~~~   70 (297)
T 2dyo_A            3 HMNDIKQLLWNGELNVLVSIDPSFLMK-GSPREIAVLRIRVPRETYLVNYMPLIW-------NK----IKSFLSFDPLTD   70 (297)
T ss_dssp             CHHHHHHHHHTCEEEEEEEECGGGBCT-TCCGGGGEEEEEEESSSCGGGGHHHHH-------HH----HGGGBSSCC---
T ss_pred             cHHHHHHHHHCCCceEEEEECcccccC-CCCCCcceEEEEcchHhHHHHHHHHHH-------HH----HHhhcccccccc
Confidence            378999999999999999999776654 68889   9999999999999999999       99    988763211111


Q ss_pred             CCCccccccccccCCcccccccceeEeeeecCCC--------------CCCceEEEEecCCCCCCccccC-CcHHHHHHH
Q psy7709         125 HPARNFFLSRTEALSQSSGRHYPIGLLYDLHVTD--------------NQLPWNITVHFDKFPANEILHC-PSREAVESH  189 (336)
Q Consensus       125 ~~~~~Wfe~~~~~~g~PLkWh~PiGvLyDl~~~~--------------~~lPW~Ltlhf~~~P~~~l~~~-~~~~~i~~~  189 (336)
                      ....+|||    |||+|||||||||||||++++.              ..+||+|||||++||++.+++| ++++++|++
T Consensus        71 ~~~~~WFe----~eg~PLkWh~PiGvLyDl~~~~~p~~~~~~~~~~~~~~lPW~Ltvhf~~~P~~~li~~~~~~~~i~~~  146 (297)
T 2dyo_A           71 SEKYFWFE----HNKTPIPWNYPVGVLFDCLAGKSATFTTSFENQVKDVLTFLRIHLVMGDSLPPTIIPIASSKTQAEKF  146 (297)
T ss_dssp             -CCEEEEE----ETTEEECTTSCHHHHHHHHHGGGC---------CCCCCCEEEEEEEEESSCCTTCCCCCSCTTHHHHH
T ss_pred             ccCcccee----ECCEEccccccceEEEEeccCCCcccccccccccccCCCCEEEEEEeCCCCccceeecCChHHHHHHH
Confidence            23458999    9999999999999999999852              2379999999999999999999 899999999


Q ss_pred             HHHHhhhhhHHhccc-hhhhcccHHHHHHHHHHhHhCChHhHHHHHhhhCCCCCCCCccceeEEEEeCCC----Cceecc
Q psy7709         190 FMSCIKEADVLKHRS-QIVSNMQKKEHNQLWLGLQNDKFDQFWVINKKLMEPGEGGGFKHIPFRCYQGDL----PFSQCL  264 (336)
Q Consensus       190 fmn~lKEA~fi~~Gs-k~im~ls~~d~~~LW~si~~~d~~~f~~in~kL~~~~~~~~~r~IPiRIy~~~~----~~iQ~~  264 (336)
                      ||||||||||||||+ |+||+||++|+++||+||++|||++||+||+||++.+    +|+||||||+++.    +++|+.
T Consensus       147 f~n~lKEAdfir~G~~k~im~Lsk~d~~~LW~~v~~~d~~~F~~i~~kL~~~~----~r~IPvRIy~~~~~~~~~~iqp~  222 (297)
T 2dyo_A          147 WFHQWKQVCFILNGSSKAIMSLSVNEARKFWGSVITRNFQDFIEISNKISSSR----PRHIPLIIQTSRTSGTFRISQPT  222 (297)
T ss_dssp             HHHHHHHHHHHHHSSSHHHHTSCHHHHHHHHHHHHHTCHHHHHHHHHHHCCSC----CSBCCEEEECCSSSSSCCEECCC
T ss_pred             HHHHHHHHHHHHhCCcHHhhhcCHHHHHHHHHHHHhhhHHHHHHHHHhccCCC----cceeeEEEEecCCCCceeeeecc
Confidence            999999999999998 9999999999999999999999999999999999863    6999999999965    588866


Q ss_pred             cccccCCCCcccHHHHH--HHhcCCCCccccccCCeeeEEEeeecCCCCCcHHHHHhhCCCCCceEEEEEEec
Q psy7709         265 VKPITNEGNPKTLQNLF--EEVYPKISIDKCKLNGILVILVHGIAIPLDTPLQWMSEHLSYPDNFLHIVVNVN  335 (336)
Q Consensus       265 v~p~~~~g~~~TL~d~L--~~~lP~lf~~~~~~~~~~~viihGI~vpld~pL~~L~~~l~~~DgFLhIvv~~~  335 (336)
                      +++   +++.+||||+|  +.++|++|+++     ..+|++|||++|+|+||+||+++|+|+||||||||++.
T Consensus       223 ~~~---~~~~~TLgd~L~~~~~lp~lf~~~-----~~~viihGI~vpl~~pl~wl~~~l~~pDgFLhIvv~~~  287 (297)
T 2dyo_A          223 ISM---TGVNPTLKDIEGDILDVKEGINGN-----DVMVICQGIEIPWHMLLYDLYSKLRSFDGFLYITLVPI  287 (297)
T ss_dssp             CBC---TTCCCBTGGGHHHHSCTTTC---------CEEEEETTEEECTTCBHHHHHHHHCCTTSCEEEEEEEC
T ss_pred             cCC---CCCCcCHHHHHhhhhhccccCCCC-----CCeEEEeCccCCCCCcHHHHHHHhcCCCcEEEEEEEEc
Confidence            543   33445999999  99999999865     24899999999999999999999999999999999874

>4gdk_B Autophagy protein 5; protein-protein conjugate, protein-protein complex, ubiquiti protein, E3 ligase, ubiquitin-like fold; 2.70A {Homo sapiens} PDB: 4gdl_B

Probab=99.46  E-value=2.4e-14  Score=135.33  Aligned_cols=61  Identities=34%  Similarity=0.828  Sum_probs=53.5

Q ss_pred             CcchHHHHHhhcCCCcceEEEeecCcccccCCCCCeeeeecchhhhhhhHHHHHHhhCCcee
Q psy7709           1 MASDREVLREVWDGKLPVCFTLLADQVSTVGEPDPSYLMVPRYVWILLDREVLREVWDGKLP   62 (336)
Q Consensus         1 ~~~~~e~~~~~w~g~ip~~~~l~~~e~~~~~~~~p~~~~~pr~~yl~l~~ei~~~iW~G~Ip   62 (336)
                      ||+|+||+|+||+|+|||||+|+++|+++ .+|+|||+|+||+||||+..+..+..+...++
T Consensus         1 m~~d~ei~r~vW~G~Ipv~i~l~~~e~~~-~~~~p~~~~vPR~sYLpl~~p~i~~~F~~~~~   61 (275)
T 4gdk_B            1 MTDDKDVLRDVWFGRIPTCFTLYQDEITE-REAEPYYLLLPRVSYLTLVTDKVKKHFQKVMR   61 (275)
T ss_dssp             --CHHHHHHHHHTCEEEEEEEECTTSCCS-SCCCCEEEEEETTSCHHHHCHHHHHHHHTTSC
T ss_pred             CCchHHHHHHHhCCCceEEEEECcccccc-CCCCcEEEEcchhhHHHHHHHHHHHHHHhhcc
Confidence            99999999999999999999999999955 57899999999999999988888888876543

>2dyo_A Autophagy protein 5; ubiquitin-fold, herix-bundle, protein turnover/protein turnover complex; 1.97A {Saccharomyces cerevisiae} PDB: 2dym_A

Probab=99.22  E-value=5.5e-12  Score=120.37  Aligned_cols=59  Identities=19%  Similarity=0.326  Sum_probs=52.8

Q ss_pred             cchHHHHHhhcCCCcceEEEeecCcccccCCCCC---eeeeecchhhhhhhHHHHHHhhCCce
Q psy7709           2 ASDREVLREVWDGKLPVCFTLLADQVSTVGEPDP---SYLMVPRYVWILLDREVLREVWDGKL   61 (336)
Q Consensus         2 ~~~~e~~~~~w~g~ip~~~~l~~~e~~~~~~~~p---~~~~~pr~~yl~l~~ei~~~iW~G~I   61 (336)
                      |.|+|++|+||+|+||+||+|+++|+ +.++|+|   ||+|+||+||||+..+..+..+...+
T Consensus         2 ~~~~~i~r~vW~G~IPv~i~L~~~~~-~~~~p~p~~~~~~~vPR~SYLpl~~p~v~~~F~~~l   63 (297)
T 2dyo_A            2 AHMNDIKQLLWNGELNVLVSIDPSFL-MKGSPREIAVLRIRVPRETYLVNYMPLIWNKIKSFL   63 (297)
T ss_dssp             -CHHHHHHHHHTCEEEEEEEECGGGB-CTTCCGGGGEEEEEEESSSCGGGGHHHHHHHHGGGB
T ss_pred             ccHHHHHHHHHCCCceEEEEECcccc-cCCCCCCcceEEEEcchHhHHHHHHHHHHHHHHhhc
Confidence            57999999999999999999997776 5578999   99999999999999998899988765

>3vqi_A ATG5; autophagy, E3-like, ubiquitin-fold, PRE-autoph structure, protein turnover, protein transport; HET: EPE; 2.50A {Kluyveromyces marxianus}

Probab=99.15  E-value=1.4e-11  Score=116.45  Aligned_cols=60  Identities=13%  Similarity=0.166  Sum_probs=53.5

Q ss_pred             hHHHHHhhcCCCcceEEEeecCccccc--CCCCCeeeeecchhhhhhhHHHHHHhhCCceeE
Q psy7709           4 DREVLREVWDGKLPVCFTLLADQVSTV--GEPDPSYLMVPRYVWILLDREVLREVWDGKLPV   63 (336)
Q Consensus         4 ~~e~~~~~w~g~ip~~~~l~~~e~~~~--~~~~p~~~~~pr~~yl~l~~ei~~~iW~G~Ipv   63 (336)
                      -.|++|+||+|+|||||+|+++|++..  ++|+|||+|+||+||||+..+..+..+...++.
T Consensus         4 ~~ei~~~vW~G~Ipv~i~l~~~e~~~~~~~~~~p~~~~vPR~SYLpl~~p~i~~~F~~~~~~   65 (274)
T 3vqi_A            4 MEELRERVWNGTINVEVVVSDAIVVPNTTLADKSCHIVMLRDAYLGFYLPTVVRKLADTIKV   65 (274)
T ss_dssp             CCHHHHHHHTCEEEEEEEECTTTBCSSCCTGGGEEEEEEETTSCHHHHHHHHHHHHGGGBCS
T ss_pred             HHHHHHHHhCCCceEEEEEChHHhcccCCCCCCcEEEEcchHhHHHHHHHHHHHHHHhhccc
Confidence            469999999999999999999999543  479999999999999999999999999887663

>2r2q_A Gamma-aminobutyric acid receptor-associated protein-like 1; autophagy, ubiquitin homolog, structural genomics consortium, SGC, microtubule; 1.65A {Homo sapiens} PDB: 2l8j_A 1kjt_A 1kot_A 3d32_A 3dow_A 1gnu_A 1klv_A 1km7_A

Probab=98.55  E-value=2e-07  Score=76.62  Aligned_cols=95  Identities=15%  Similarity=0.203  Sum_probs=73.0

Q ss_pred             HhCChHhHHHHHhhhCCCCCCCCccceeEEEEeCC---CCceec---ccccccCCCCcccHHHHH---HHhcCCCCcccc
Q psy7709         223 QNDKFDQFWVINKKLMEPGEGGGFKHIPFRCYQGD---LPFSQC---LVKPITNEGNPKTLQNLF---EEVYPKISIDKC  293 (336)
Q Consensus       223 ~~~d~~~f~~in~kL~~~~~~~~~r~IPiRIy~~~---~~~iQ~---~v~p~~~~g~~~TL~d~L---~~~lP~lf~~~~  293 (336)
                      ..|.|++....+.+|....+    .+|||++...+   .+.++.   +|+-      ..|+++++   +..+ .+.+++ 
T Consensus         6 ~~~~~e~R~~e~~~ir~k~p----~~IPVive~~~~~~~p~l~k~KflVp~------~~tv~~~~~~iRk~l-~l~~~~-   73 (110)
T 2r2q_A            6 EDHPFEYRKKEGEKIRKKYP----DRVPVIVEKAPKARVPDLDKRKYLVPS------DLTVGQFYFLIRKRI-HLRPED-   73 (110)
T ss_dssp             HHSCHHHHHHHHHHHHHHCT----TEEEEEEEECTTCCSCCCSCCEEEEET------TCBHHHHHHHHHHHT-TCCTTS-
T ss_pred             ccCCHHHHHHHHHHHHHhCC----CceEEEEEecCCCCCCccceeEEEeCC------CCcHHHHHHHHHHHh-cCCCCC-
Confidence            46889999999999987544    68999999874   366655   4542      35888876   5555 343322 


Q ss_pred             ccCCeeeEEEeeecCCCCCcHHHHHhhCCCCCceEEEEEE
Q psy7709         294 KLNGILVILVHGIAIPLDTPLQWMSEHLSYPDNFLHIVVN  333 (336)
Q Consensus       294 ~~~~~~~viihGI~vpld~pL~~L~~~l~~~DgFLhIvv~  333 (336)
                          ...++++|+.+|+++.+.+||++++..||||||+..
T Consensus        74 ----alfl~vn~~~p~~~~~m~~LY~~~kd~DGfLyi~Ys  109 (110)
T 2r2q_A           74 ----ALFFFVNNTIPPTSATMGQLYEDNHEEDYFLYVAYS  109 (110)
T ss_dssp             ----CCEEEBTTBCCCTTSBHHHHHHHHCCTTSCEEEEEE
T ss_pred             ----cEEEEECCEecCccChHHHHHHHcCCCCCEEEEEEe
Confidence                346899999999999999999999999999999753

>1eo6_A GATE-16, golgi-associated ATPase enhancer of 16 KD; ubiquitin fold, protein binding; 1.80A {Bos taurus} SCOP: d.15.1.3

Probab=98.29  E-value=1.9e-06  Score=71.54  Aligned_cols=95  Identities=12%  Similarity=0.123  Sum_probs=69.2

Q ss_pred             hCChHhHHHHHhhhCCCCCCCCccceeEEEEeCC---CCceec---ccccccCCCCcccHHHHH---HHhcCCCCccccc
Q psy7709         224 NDKFDQFWVINKKLMEPGEGGGFKHIPFRCYQGD---LPFSQC---LVKPITNEGNPKTLQNLF---EEVYPKISIDKCK  294 (336)
Q Consensus       224 ~~d~~~f~~in~kL~~~~~~~~~r~IPiRIy~~~---~~~iQ~---~v~p~~~~g~~~TL~d~L---~~~lP~lf~~~~~  294 (336)
                      .|.|++=...+.+|....+    .+|||+|....   .+.++.   +|+.      ..|+++++   +..+ .+.++   
T Consensus         8 ~~~~e~R~~e~~~ir~kyP----~~IPVIve~~~~s~~p~l~k~KflVp~------~~tv~~f~~~iRk~l-~l~~~---   73 (117)
T 1eo6_A            8 DHSLEHRCVESAKIRAKYP----DRVPVIVEKVSGSQIVDIDKRKYLVPS------DITVAQFMWIIRKRI-QLPSE---   73 (117)
T ss_dssp             HSCHHHHHHHHHHHHHHCT----TEEEEEEEECTTCSSCCCSCCEEEEET------TSBHHHHHHHHHHHH-TCCTT---
T ss_pred             cCCHHHHHHHHHHHHHHCC----CeEEEEEEecCCCCCCcccceEEEcCC------CCCHHHHHHhhHHhh-cCCCC---
Confidence            4666666666777765433    68999999763   366665   4542      35788776   5555 34332   


Q ss_pred             cCCeeeEEEeeecCCCCCcHHHHHhhCCCCCceEEEEEEe
Q psy7709         295 LNGILVILVHGIAIPLDTPLQWMSEHLSYPDNFLHIVVNV  334 (336)
Q Consensus       295 ~~~~~~viihGI~vpld~pL~~L~~~l~~~DgFLhIvv~~  334 (336)
                        ....++|+|+.+|.++.+.+||++++..||||||....
T Consensus        74 --~alfl~vn~~~p~~~~~m~~LY~~~kd~DGfLyi~Ys~  111 (117)
T 1eo6_A           74 --KAIFLFVDKTVPQSSLTMGQLYEKEKDEDGFLYVAYSG  111 (117)
T ss_dssp             --SCCEEEBTTBCCCTTSBHHHHHHHHCCTTSCEEEEEEC
T ss_pred             --CcEEEEECCEecCccchHHHHHHHhCCCCCEEEEEEeC
Confidence              23468999999999999999999999999999998753

>3h9d_A ATG8, microtubule-associated protein 1A/1B, light chain putative; autophagy, lipidation, ubiquitin-like, S protein; 2.30A {Trypanosoma brucei} SCOP: d.15.1.0

Probab=95.86  E-value=0.028  Score=46.55  Aligned_cols=75  Identities=13%  Similarity=0.213  Sum_probs=52.6

Q ss_pred             cceeEEEEeCC---CCceec---ccccccCCCCcccHHHHH---HHhcCCCCccccccCCeeeEEEeeecCCCCCcHHHH
Q psy7709         247 KHIPFRCYQGD---LPFSQC---LVKPITNEGNPKTLQNLF---EEVYPKISIDKCKLNGILVILVHGIAIPLDTPLQWM  317 (336)
Q Consensus       247 r~IPiRIy~~~---~~~iQ~---~v~p~~~~g~~~TL~d~L---~~~lP~lf~~~~~~~~~~~viihGI~vpld~pL~~L  317 (336)
                      .+|||.+-...   .|.++.   +|+      ...|+++++   +..+- +-+     .....+.|++..++.++.+..|
T Consensus        30 ~rIPVIvEr~~~~~~P~Ldk~KflVp------~~~tv~qf~~~iRkrl~-l~~-----~~alFl~Vn~~~p~~~~~m~~l   97 (119)
T 3h9d_A           30 DRLPIICEKVYNSDIGELDRCKFLVP------SDLTVGQFVSVLRKRVQ-LEA-----ESALFVYTNDTVLPSSAQMADI   97 (119)
T ss_dssp             TEEEEEEEECTTSSCCCCSSCEEEEE------TTCBHHHHHHHHHHHHT-CCT-----TSCCEEEETTEECCTTSBHHHH
T ss_pred             CeEEEEEEecCCCCCCccCcceEEcC------CCCCHHHHHHHHHHHhC-CCc-----cceEEEEECCcCCCccchHHHH
Confidence            47999998763   244443   233      235777765   44441 211     2345788899988999999999


Q ss_pred             HhhCCCCCceEEEEEE
Q psy7709         318 SEHLSYPDNFLHIVVN  333 (336)
Q Consensus       318 ~~~l~~~DgFLhIvv~  333 (336)
                      |++++.-||||||...
T Consensus        98 Y~~~kd~DGfLyv~Ys  113 (119)
T 3h9d_A           98 YSKYKDEDGFLYMKYS  113 (119)
T ss_dssp             HHHHCCTTSCEEEEEE
T ss_pred             HHHcCCCCCeEEEEEe
Confidence            9999999999999765

>3rui_B Autophagy-related protein 8; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} SCOP: d.15.1.3 PDB: 2kq7_A 2zpn_A 3vxw_A 2kwc_A 2li5_A 3vh3_B 3vh4_B*

Probab=95.82  E-value=0.032  Score=46.11  Aligned_cols=76  Identities=17%  Similarity=0.251  Sum_probs=52.6

Q ss_pred             cceeEEEEeCC---CCceec---ccccccCCCCcccHHHHH---HHhcCCCCccccccCCeeeEEEeeecCCCCCcHHHH
Q psy7709         247 KHIPFRCYQGD---LPFSQC---LVKPITNEGNPKTLQNLF---EEVYPKISIDKCKLNGILVILVHGIAIPLDTPLQWM  317 (336)
Q Consensus       247 r~IPiRIy~~~---~~~iQ~---~v~p~~~~g~~~TL~d~L---~~~lP~lf~~~~~~~~~~~viihGI~vpld~pL~~L  317 (336)
                      .+|||.+-...   .|.++.   +|+      ...|+++++   +..+- +-+     .....+.|++..++.++.+..|
T Consensus        29 ~riPVIvE~~~~~~~P~ldk~KflVp------~~~tv~qf~~~iRkrl~-l~~-----~~alFl~Vn~~~p~~~~~m~~l   96 (118)
T 3rui_B           29 NRIPVICEKAEKSDIPEIDKRKYLVP------ADLTVGQFVYVIRKRIM-LPP-----EKAIFIFVNDTLPPTAALMSAI   96 (118)
T ss_dssp             SEEEEEEEECTTCCSCCCSCCEEEEE------TTSBHHHHHHHHHHHTT-CCT-----TCCEEEEBTTBCCCTTSBHHHH
T ss_pred             CceEEEEEeCCCCCCCccccceEEcC------CCCCHHHHHHHHHHHhC-cCC-----CccEEEEECCccCCccchHHHH
Confidence            47999998763   234433   233      235777664   45542 211     1245677888888999999999


Q ss_pred             HhhCCCCCceEEEEEEe
Q psy7709         318 SEHLSYPDNFLHIVVNV  334 (336)
Q Consensus       318 ~~~l~~~DgFLhIvv~~  334 (336)
                      |++++.-||||||....
T Consensus        97 Y~~~kdeDGfLyv~Ys~  113 (118)
T 3rui_B           97 YQEHKDKDGFLYVTYSG  113 (118)
T ss_dssp             HHHHCCTTSCEEEEEEE
T ss_pred             HHHcCCCCCeEEEEEec
Confidence            99999999999998653

>1wz3_A Autophagy 12B, ATG12B, APG12B; ubiquitin-fold, plant protein; 1.80A {Arabidopsis thaliana} SCOP: d.15.1.7

Probab=95.54  E-value=0.044  Score=43.66  Aligned_cols=78  Identities=9%  Similarity=0.081  Sum_probs=50.8

Q ss_pred             ccceeEEEEeCC-CCceecccccccCCCCcccHHHHHHHhcCCCCccccccCCeeeEEEee-ecCCCCCcHHHHHhhCCC
Q psy7709         246 FKHIPFRCYQGD-LPFSQCLVKPITNEGNPKTLQNLFEEVYPKISIDKCKLNGILVILVHG-IAIPLDTPLQWMSEHLSY  323 (336)
Q Consensus       246 ~r~IPiRIy~~~-~~~iQ~~v~p~~~~g~~~TL~d~L~~~lP~lf~~~~~~~~~~~viihG-I~vpld~pL~~L~~~l~~  323 (336)
                      -+.|+||+.-.+ .+.++...--...+-+-.++-..|++.+. +      +  ...++++. ..++.|+.+..||++++.
T Consensus        11 ~~KV~V~~~~~~~~P~l~k~KflV~~~~t~~~~~~~lRkrL~-l------~--alFlyvn~~~~Ps~d~~m~~LY~~~kd   81 (96)
T 1wz3_A           11 VQKIVVHLRATGGAPILKQSKFKVSGSDKFANVIDFLRRQLH-S------D--SLFVYVNSAFSPNPDESVIDLYNNFGF   81 (96)
T ss_dssp             -CEEEEEEEECTTCCCCSCCEEEEETTSBTHHHHHHHHHHHT-C------S--SCEEEEEEEECCCTTSBHHHHHHHHCB
T ss_pred             CCeEEEEEEECCCCCcccccEEEeCCCCcHHHHHHHHHHhcC-C------c--eEEEEECCcccCChhhHHHHHHHHhCC
Confidence            367999999764 45555432112222233344444555542 1      1  34568888 778899999999999999


Q ss_pred             CCceEEEEEE
Q psy7709         324 PDNFLHIVVN  333 (336)
Q Consensus       324 ~DgFLhIvv~  333 (336)
                       ||||||.-+
T Consensus        82 -DGfLyi~Ys   90 (96)
T 1wz3_A           82 -DGKLVVNYA   90 (96)
T ss_dssp             -TTBEEEEEE
T ss_pred             -CCEEEEEEe
Confidence             999999765

>3m95_A Autophagy related protein ATG8; alpha slash beta, receptor, transport protein; 2.40A {Bombyx mori} SCOP: d.15.1.3

Probab=95.21  E-value=0.06  Score=44.95  Aligned_cols=75  Identities=16%  Similarity=0.210  Sum_probs=52.0

Q ss_pred             cceeEEEEeCC---CCceec---ccccccCCCCcccHHHHH---HHhcCCCCccccccCCeeeEEEeeecCCCCCcHHHH
Q psy7709         247 KHIPFRCYQGD---LPFSQC---LVKPITNEGNPKTLQNLF---EEVYPKISIDKCKLNGILVILVHGIAIPLDTPLQWM  317 (336)
Q Consensus       247 r~IPiRIy~~~---~~~iQ~---~v~p~~~~g~~~TL~d~L---~~~lP~lf~~~~~~~~~~~viihGI~vpld~pL~~L  317 (336)
                      .+|||.+-...   .|.+..   +||      ...|+++++   +..+- +-+     .....+.|++..++.++.+..|
T Consensus        35 ~rIPVIvEr~~~s~lP~LdK~KflVp------~~~tv~qf~~~IRkrl~-L~~-----~~alFl~Vnn~lPs~s~~m~~l  102 (125)
T 3m95_A           35 DRVPVIVEKAPKARLGDLDKKKYLVP------SDLTVGQFYFLIRKRIH-LRP-----EDALFFFVNNVIPPTSATMGSL  102 (125)
T ss_dssp             TEEEEEEEECTTCSSCCCSCCEEEEE------TTSBHHHHHHHHHHHTT-CCT-----TSCCEEEBTTBCCCTTSBHHHH
T ss_pred             CeEEEEEEecCCCCCccccCCEEEcC------CCCEeeeehhhhHhhcC-CCc-----cccEEEEECCccCCccchHHHH
Confidence            46999998763   233332   233      235777765   44442 211     2245678888888999999999


Q ss_pred             HhhCCCCCceEEEEEE
Q psy7709         318 SEHLSYPDNFLHIVVN  333 (336)
Q Consensus       318 ~~~l~~~DgFLhIvv~  333 (336)
                      |++++.-||||||...
T Consensus       103 Y~~~kdeDGfLY~~Ys  118 (125)
T 3m95_A          103 YQEHHDEDFFLYIAFS  118 (125)
T ss_dssp             HHHHCCTTSCEEEEEE
T ss_pred             HHHcCCCCCeEEEEec
Confidence            9999999999999765

>2zjd_A Microtubule-associated proteins 1A/1B light chain 3B precursor; autophagy, LC3, microtubule-associated protein 1 light chain 3, cytoplasm, cytoplasmic vesicle, lipoprotein; 1.56A {Homo sapiens} SCOP: d.15.1.3 PDB: 2z0e_B 2zzp_B 2z0d_B 1ugm_A 1v49_A 2k6q_A 3eci_A

Probab=94.68  E-value=0.08  Score=44.42  Aligned_cols=94  Identities=18%  Similarity=0.217  Sum_probs=57.5

Q ss_pred             hCChHhHHHHHhhhCCCCCCCCccceeEEEEeCC----CCceec---ccccccCCCCcccHHHHH---HHhcCCCCcccc
Q psy7709         224 NDKFDQFWVINKKLMEPGEGGGFKHIPFRCYQGD----LPFSQC---LVKPITNEGNPKTLQNLF---EEVYPKISIDKC  293 (336)
Q Consensus       224 ~~d~~~f~~in~kL~~~~~~~~~r~IPiRIy~~~----~~~iQ~---~v~p~~~~g~~~TL~d~L---~~~lP~lf~~~~  293 (336)
                      .|.|++=..-..+|....+    .+|||.+-...    .+.+..   +|+      ...|++++.   +..+. +-++  
T Consensus        15 ~~~~e~R~~e~~~ir~kyP----~kIPVIvEk~~~s~~~P~Ldk~KflVp------~~~tv~qf~~~iRkrL~-l~~~--   81 (130)
T 2zjd_A           15 RRTFEQRVEDVRLIREQHP----TKIPVIIERYKGEKQLPVLDKTKFLVP------DHVNMSELIKIIRRRLQ-LNAN--   81 (130)
T ss_dssp             HSCHHHHHHHHHHHHHHCT----TEEEEEEEECTTCCSSCCCSCCEEEEE------TTCBHHHHHHHHHHHHT-CCTT--
T ss_pred             hCCHHHHHHHHHHHHHhCC----CceEEEEEEcCCCCcCccccccEEEcC------CCCcHHHHHHHHHHHhC-CCCC--
Confidence            3444443333444443222    47999997542    233322   233      235666654   44442 2111  


Q ss_pred             ccCCeeeE-EEeeecCCCCCcHHHHHhhCCCCCceEEEEEE
Q psy7709         294 KLNGILVI-LVHGIAIPLDTPLQWMSEHLSYPDNFLHIVVN  333 (336)
Q Consensus       294 ~~~~~~~v-iihGI~vpld~pL~~L~~~l~~~DgFLhIvv~  333 (336)
                         ....+ ++++.-++.++.+..||++++.-||||||...
T Consensus        82 ---~alFl~~vn~~~p~~~~~m~~lY~~~kdeDGfLyv~Ys  119 (130)
T 2zjd_A           82 ---QAFFLLVNGHSMVSVSTPISEVYESEKDEDGFLYMVYA  119 (130)
T ss_dssp             ---CCEEEEETTTEECCTTSBHHHHHHHHCCTTSCEEEEEE
T ss_pred             ---ceEEEEEECCccCCccchHHHHHHHhCCCCCEEEEEEe
Confidence               23345 78999889999999999999999999999764

>4gdk_A Ubiquitin-like protein ATG12; protein-protein conjugate, protein-protein complex, ubiquiti protein, E3 ligase, ubiquitin-like fold; 2.70A {Homo sapiens} PDB: 4gdl_A

Probab=90.14  E-value=1.1  Score=35.22  Aligned_cols=77  Identities=19%  Similarity=0.179  Sum_probs=47.9

Q ss_pred             cceeEEEEeC-CCCceecccccccCCCCcccHHHHH---HHhcCCCCccccccCCeeeEEEeee-cCCCCCcHHHHHhhC
Q psy7709         247 KHIPFRCYQG-DLPFSQCLVKPITNEGNPKTLQNLF---EEVYPKISIDKCKLNGILVILVHGI-AIPLDTPLQWMSEHL  321 (336)
Q Consensus       247 r~IPiRIy~~-~~~~iQ~~v~p~~~~g~~~TL~d~L---~~~lP~lf~~~~~~~~~~~viihGI-~vpld~pL~~L~~~l  321 (336)
                      +.|=||+.-. +.|.+....-...   ...|+++++   +..+- +-+     .....+.|+.. .+.+|+.+..||+++
T Consensus         4 ~Kv~v~fk~~g~~P~l~k~KflVp---~~~tv~~~~~~lRkrL~-l~~-----~~alFlyVnn~~~P~~d~~~~~Ly~~~   74 (91)
T 4gdk_A            4 KKIDILLKAVGDTPIMKTKKWAVE---RTRTIQGLIDFIKKFLK-LVA-----SEQLFIYVNQSFAPSPDQEVGTLYECF   74 (91)
T ss_dssp             CEEEEEEEECSSSCCCSCCEEEEE---TTCBHHHHHHHHHHHTT-CCS-----SSCCEEEETTTBCCCTTCBHHHHHHHH
T ss_pred             ceEEEEEEecCCCCcccccEEEcC---CCCCHHHHHHHHHHHhC-CCC-----CCeEEEEECCccCCChhhHHHHHHHHh
Confidence            3466666654 4455555321111   234666654   55442 211     23457888885 567799999999999


Q ss_pred             CCCCceEEEEEE
Q psy7709         322 SYPDNFLHIVVN  333 (336)
Q Consensus       322 ~~~DgFLhIvv~  333 (336)
                      + -||||||.-+
T Consensus        75 k-~DGfLyv~Ys   85 (91)
T 4gdk_A           75 G-SDGKLVLHYC   85 (91)
T ss_dssp             C-BTTEEEEEEE
T ss_pred             C-CCCEEEEEEe
Confidence            9 9999999764

>3w1s_C Ubiquitin-like protein ATG12; ubiquitin fold, E3-like, ATG3 binding, isopeptide bond betwe Gly186 and ATG5 Lys149, ligase; 2.60A {Saccharomyces cerevisiae S288C}

Probab=85.19  E-value=2.1  Score=33.53  Aligned_cols=74  Identities=7%  Similarity=0.010  Sum_probs=43.7

Q ss_pred             cceeEEEEeC-CCCceecccccccCCCCcccHHHH---HHHhcCCCCccccccCCeeeEEEeee-cCCCCCcHHHHHhhC
Q psy7709         247 KHIPFRCYQG-DLPFSQCLVKPITNEGNPKTLQNL---FEEVYPKISIDKCKLNGILVILVHGI-AIPLDTPLQWMSEHL  321 (336)
Q Consensus       247 r~IPiRIy~~-~~~~iQ~~v~p~~~~g~~~TL~d~---L~~~lP~lf~~~~~~~~~~~viihGI-~vpld~pL~~L~~~l  321 (336)
                      +.|=||.--. +.|.++...--..   ...|++++   |++.+-.         ....+.|+.. .+++|+.+..||+++
T Consensus         7 ~Kv~vrfk~~g~~P~l~k~KflV~---~~~t~~~~v~~lRkrL~l---------~alFlyVNn~f~Ps~d~~~~~Ly~~f   74 (91)
T 3w1s_C            7 QKIQIKFQPIGSIGQLKPSVCKIS---MSQSFAMVILFLKRRLKM---------DHVYCYINNSFAPSPQQNIGELWMQF   74 (91)
T ss_dssp             CEEEEEEEECCC-------EEEEE---TTSBHHHHHHHHHHHHTC---------SCCEEEETTTBCCCTTSBHHHHHHHH
T ss_pred             CeEEEEEEecCCCCcccccEEEcC---CCCCHHHHHHHHHHhhCC---------ceEEEEECCccCCCcccHHHHHHHHh
Confidence            3466666543 4566665321111   12455554   4555531         1346888884 677899999999999


Q ss_pred             CCCCceEEEEEE
Q psy7709         322 SYPDNFLHIVVN  333 (336)
Q Consensus       322 ~~~DgFLhIvv~  333 (336)
                      + -||||||.-+
T Consensus        75 k-~dg~Lyv~Ys   85 (91)
T 3w1s_C           75 K-TNDELIVSYC   85 (91)
T ss_dssp             C-BTTEEEEEEE
T ss_pred             C-CCCEEEEEEe
Confidence            9 7999999765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	336
d3d32a1	118	GABA(A) receptor associated protein GABARAP {Human	96.17
d1eo6a_	116	Golgi-associated ATPase enhancer of 16 kD, Gate-16	95.71
d2zjda1	119	Microtubule-associated proteins 1A/1B light chain	95.18

>d3d32a1 d.15.1.3 (A:1-118) GABA(A) receptor associated protein GABARAP {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-Grasp (ubiquitin-like)
superfamily: Ubiquitin-like
family: GABARAP-like
domain: GABA(A) receptor associated protein GABARAP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.17  E-value=0.0052  Score=48.88  Aligned_cols=93  Identities=14%  Similarity=0.155  Sum_probs=60.9

Q ss_pred             CChHhHHHHHhhhCCCCCCCCccceeEEEEeCC---CCceec---ccccccCCCCcccHHHHHHH---hcCCCCcccccc
Q psy7709         225 DKFDQFWVINKKLMEPGEGGGFKHIPFRCYQGD---LPFSQC---LVKPITNEGNPKTLQNLFEE---VYPKISIDKCKL  295 (336)
Q Consensus       225 ~d~~~f~~in~kL~~~~~~~~~r~IPiRIy~~~---~~~iQ~---~v~p~~~~g~~~TL~d~L~~---~lP~lf~~~~~~  295 (336)
                      |.|++=..-+++++..-+    .+|||.+-...   .+.++.   +||      ...|+++++..   .+- +-     .
T Consensus        11 ~s~e~R~~es~~i~~KyP----driPVIve~~~~s~lp~ldk~KflVp------~d~tv~qf~~~iRkrl~-l~-----~   74 (118)
T d3d32a1          11 HPFEKRRSEGEKIRKKYP----DRVPVIVEKAPKARIGDLDKKKYLVP------SDLTVGQFYFLIRKRIH-LR-----A   74 (118)
T ss_dssp             SCHHHHHHHHHHHHHHCT----TEEEEEEEECTTCCSCCCSCSEEEEE------TTCBHHHHHHHHHHHHT-CC-----T
T ss_pred             CCHHHHHHHHHHHHHHCC----CCceEEEEEcCCCCCcccccceEEec------CCccHHHHHHHHHHHhC-CC-----c
Confidence            344433333455554322    47999998643   234443   444      23688887743   341 21     1


Q ss_pred             CCeeeEEEeeecCCCCCcHHHHHhhCCCCCceEEEEEE
Q psy7709         296 NGILVILVHGIAIPLDTPLQWMSEHLSYPDNFLHIVVN  333 (336)
Q Consensus       296 ~~~~~viihGI~vpld~pL~~L~~~l~~~DgFLhIvv~  333 (336)
                      .....+.|+|.-+|.++-+..||+..+.-||||||...
T Consensus        75 ~~alflfvn~~~~~~~~ti~~lY~~~kdeDGfLYi~Ys  112 (118)
T d3d32a1          75 EDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYS  112 (118)
T ss_dssp             TSCCEEEBTTBCCCTTCBHHHHHHHHCCTTSCEEEEEE
T ss_pred             cceEEEEECCcccCccccHHHHHHHhCCCCcEEEEEEe
Confidence            23456888999999999999999999999999999875

>d1eo6a_ d.15.1.3 (A:) Golgi-associated ATPase enhancer of 16 kD, Gate-16 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: beta-Grasp (ubiquitin-like)
superfamily: Ubiquitin-like
family: GABARAP-like
domain: Golgi-associated ATPase enhancer of 16 kD, Gate-16
species: Cow (Bos taurus) [TaxId: 9913]

Probab=95.71  E-value=0.011  Score=46.81  Aligned_cols=93  Identities=12%  Similarity=0.113  Sum_probs=60.3

Q ss_pred             CChHhHHHHHhhhCCCCCCCCccceeEEEEeCC---CCceec---ccccccCCCCcccHHHHHHHh---cCCCCcccccc
Q psy7709         225 DKFDQFWVINKKLMEPGEGGGFKHIPFRCYQGD---LPFSQC---LVKPITNEGNPKTLQNLFEEV---YPKISIDKCKL  295 (336)
Q Consensus       225 ~d~~~f~~in~kL~~~~~~~~~r~IPiRIy~~~---~~~iQ~---~v~p~~~~g~~~TL~d~L~~~---lP~lf~~~~~~  295 (336)
                      +.|++=..-+++++..-+    .+|||.+-...   .+-++.   +||      +..|+|+++..+   + .+-+     
T Consensus         9 ~sfe~R~~es~~i~~KyP----~rIPVIve~~~~~~l~~ldk~KfLVP------~dltv~qf~~vIRkrl-~l~~-----   72 (116)
T d1eo6a_           9 HSLEHRCVESAKIRAKYP----DRVPVIVEKVSGSQIVDIDKRKYLVP------SDITVAQFMWIIRKRI-QLPS-----   72 (116)
T ss_dssp             SCHHHHHHHHHHHHHHCT----TEEEEEEEECTTCSSCCCSCCEEEEE------TTSBHHHHHHHHHHHH-TCCT-----
T ss_pred             CCHHHHHHHHHHHHHHCC----CCceEEEEECCcCcCCcccCcEEeec------CCCcHHHHHHHHHHHc-CCCc-----
Confidence            344433333455554323    47999998642   233322   333      347899887543   3 2211     


Q ss_pred             CCeeeEEEeeecCCCCCcHHHHHhhCCCCCceEEEEEE
Q psy7709         296 NGILVILVHGIAIPLDTPLQWMSEHLSYPDNFLHIVVN  333 (336)
Q Consensus       296 ~~~~~viihGI~vpld~pL~~L~~~l~~~DgFLhIvv~  333 (336)
                      .....+.|+|.-++.++.+..+|+..+.-||||||+..
T Consensus        73 ~~alflfv~~~l~~~s~~i~~lY~~~KdeDGfLYi~Ys  110 (116)
T d1eo6a_          73 EKAIFLFVDKTVPQSSLTMGQLYEKEKDEDGFLYVAYS  110 (116)
T ss_dssp             TSCCEEEBTTBCCCTTSBHHHHHHHHCCTTSCEEEEEE
T ss_pred             cceEEEEECCcccchhhhHHHHHHHcCCCCcEEEEEEe
Confidence            23456778999899999999999999999999999865

>d2zjda1 d.15.1.3 (A:2-120) Microtubule-associated proteins 1A/1B light chain 3B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-Grasp (ubiquitin-like)
superfamily: Ubiquitin-like
family: GABARAP-like
domain: Microtubule-associated proteins 1A/1B light chain 3B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.18  E-value=0.034  Score=44.01  Aligned_cols=93  Identities=23%  Similarity=0.296  Sum_probs=58.2

Q ss_pred             CChHhHHHHHhhhCCCCCCCCccceeEEEEeC-C---CCceec---ccccccCCCCcccHHHHHH---HhcCCCCccccc
Q psy7709         225 DKFDQFWVINKKLMEPGEGGGFKHIPFRCYQG-D---LPFSQC---LVKPITNEGNPKTLQNLFE---EVYPKISIDKCK  294 (336)
Q Consensus       225 ~d~~~f~~in~kL~~~~~~~~~r~IPiRIy~~-~---~~~iQ~---~v~p~~~~g~~~TL~d~L~---~~lP~lf~~~~~  294 (336)
                      |.|++=-.-+++++..-+    .+|||.+-.. +   .+.++.   +||      ...|+++++.   ..+ .+-     
T Consensus        10 ~~fe~R~~es~~i~~KyP----~riPVIve~~~~~~~lp~Ldk~KfLVp------~d~tv~qf~~~iRkrl-~l~-----   73 (119)
T d2zjda1          10 RTFEQRVEDVRLIREQHP----TKIPVIIERYKGEKQLPVLDKTKFLVP------DHVNMSELIKIIRRRL-QLN-----   73 (119)
T ss_dssp             SCHHHHHHHHHHHHHHCT----TEEEEEEEECTTCCSSCCCSCCEEEEE------TTCBHHHHHHHHHHHH-TCC-----
T ss_pred             CCHHHHHHHHHHHHHHCC----CcceEEEEECCCCCcCccccceEEEEe------cCccHHHHHHHHHHHh-CCC-----
Confidence            444433334455554323    5799999753 2   244433   343      3468887764   334 221     


Q ss_pred             cCCeeeEEEee-ecCCCCCcHHHHHhhCCCCCceEEEEEE
Q psy7709         295 LNGILVILVHG-IAIPLDTPLQWMSEHLSYPDNFLHIVVN  333 (336)
Q Consensus       295 ~~~~~~viihG-I~vpld~pL~~L~~~l~~~DgFLhIvv~  333 (336)
                      ......+.|.| +-++.++-+..||+.++.-||||||...
T Consensus        74 ~~~alFlfvn~~~~p~~~~~i~~lY~~~kdeDGfLYi~Ys  113 (119)
T d2zjda1          74 ANQAFFLLVNGHSMVSVSTPISEVYESEKDEDGFLYMVYA  113 (119)
T ss_dssp             TTCCEEEEETTTEECCTTSBHHHHHHHHCCTTSCEEEEEE
T ss_pred             CcceEEEEEcCCccCCchhHHHHHHHHcCCCCCeEEEEEe
Confidence            12344577764 6678899999999999999999999865