Psyllid ID: psy7854

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150---
Protein Sequence
MANNANANMLTEGRLRIKGVSKHSRLAVALRRSISIDEFTVHSSTLIALSQESQDLERLKFGLEPPTSRSEVHGANHHTTENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSFQSNFQDSSPILKI
Secondary Structure (PSIPRED)
ccccccccccccccEEEccccccccccccccccEEccccccccccccEEEcccccEEcccccccccccccccccEEEccccccccccccEEEEccccEEEEcccccEEcccccccccccccccccccccccEEEEccccEEEEccccccEEEc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHccccEEEEEccccccHHHHHcccccccccccccEEEcccccccccccccccccccccccccccccEcccccccccccEEEcccccEEEEcccccEEcccccEEEEcHHHccccccccccEEEcccccEEEEccccccEccc
Coil and Loop (DISEMBL)
MANNANANMLTEGRLRIKGVSKHSRLAVALRRSIsideftvhSSTLIALSQESQDLERlkfglepptsrsevhganhhttenpgictngacenlmgtyrcicnpgyegdptgklcsdqneCLMDVMicsggtckntpgsfqsnfqdsspilki
Flexible Loop (DISEMBL)
mannananmltegrlrikgvskHSRLAVALRRsisideftvhSSTLIALSQESQDLERLKFGLEPPTSRSEVHganhhttenpgiCTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCkntpgsfqsnfqdsspilki
Low Complexity Region (SEG)
MANNANANMLTEGRLRIKGVSKHSRLAVALRRSISIDEFTVHSSTLIALSQESQDLERLKFGLEPPTSRSEVHGANHHTTENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSFQSNFQDSSPILKI
Disordered region (IsUnstruct)
****************IKGVSKHSRLAVALRRSISIDEFTVHSSTLIAL*********************************PGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTC********************
Disordered Region (DISOPRED)
*****NANMLTEGRLRIKGVSKHSRLAVALRRSISIDEFTVHSSTLIALSQESQDLERLKFGLEPPTSRSEVHGANHHTTENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSFQSNFQDSSPILKI
Disordered Region (DISEMBL)
********MLTEGRLRIKGVSKHSRLAVALRRSISIDEFTVHSSTLIALSQESQDLERLKFGLEPPTSRSEVHGANHHTTENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSFQSNFQDSSPILKI
Disordered Region (DISPRO)
**N**N*NMLTEGRLRIKGVSKHSRLAVALRRSISIDEFTVHSSTLIALSQESQDLERLKFGLEPPTSRSEVHGANHHTTENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSFQSNFQDSSPIL**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MANNANANMLTEGRLRIKGVSKHSRLAVALRRSISIDEFTVHSSTLIALSQESQDLERLKFGLEPPTSRSEVHGANHHTTENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSFQSNFQDSSPILKI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	153	2.2.26 [Sep-21-2011]
P35555	2871	Fibrillin-1 OS=Homo sapie	yes	N/A	0.379	0.020	0.627	2e-15
Q9TV36	2871	Fibrillin-1 OS=Sus scrofa	yes	N/A	0.372	0.019	0.627	2e-15
P98133	2871	Fibrillin-1 OS=Bos taurus	yes	N/A	0.379	0.020	0.627	2e-15
Q61554	2871	Fibrillin-1 OS=Mus muscul	yes	N/A	0.267	0.014	0.627	3e-15
Q61555	2907	Fibrillin-2 OS=Mus muscul	no	N/A	0.372	0.019	0.559	4e-13
P35556	2912	Fibrillin-2 OS=Homo sapie	no	N/A	0.372	0.019	0.559	4e-13
Q75N90	2809	Fibrillin-3 OS=Homo sapie	no	N/A	0.379	0.020	0.508	5e-13
Q8CG19	1712	Latent-transforming growt	no	N/A	0.398	0.035	0.435	2e-09
Q00918	1712	Latent-transforming growt	no	N/A	0.398	0.035	0.435	3e-09
O08999	1813	Latent-transforming growt	no	N/A	0.372	0.031	0.517	2e-08

>sp|P35555|FBN1_HUMAN Fibrillin-1 OS=Homo sapiens GN=FBN1 PE=1 SV=3

 Score = 81.6 bits (200), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 37/59 (62%), Positives = 45/59 (76%)

Query: 82  NPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSF 140
           +P IC NG CENL GTY+CICN GYE D TGK C D NEC+++ ++C  G C+NTPGSF
Sbjct: 730 DPDICPNGICENLRGTYKCICNSGYEVDSTGKNCVDINECVLNSLLCDNGQCRNTPGSF 788

Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-1-containing microfibrils provide long-term force bearing structural support. Regulates osteoblast maturation by controlling TGF-beta bioavailability and calibrating TGF-beta and BMP levels, respectively.
Homo sapiens (taxid: 9606)

>sp|Q9TV36|FBN1_PIG Fibrillin-1 OS=Sus scrofa GN=FBN1 PE=2 SV=1

 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 37/59 (62%), Positives = 45/59 (76%)

Query: 82  NPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSF 140
           +P IC NG CENL GTY+CICN GYE D TGK C D NEC+++ ++C  G C+NTPGSF
Sbjct: 730 DPDICPNGICENLRGTYKCICNSGYEVDSTGKNCVDINECVLNSLLCDNGQCRNTPGSF 788

Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-1-containing microfibrils provide long-term force bearing structural support. Regulates osteoblast maturation by controlling TGF-beta bioavailability and calibrating TGF-beta and BMP levels, respectively.

Sus scrofa (taxid: 9823)

>sp|P98133|FBN1_BOVIN Fibrillin-1 OS=Bos taurus GN=FBN1 PE=1 SV=1

 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 37/59 (62%), Positives = 45/59 (76%)

Query: 82  NPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSF 140
           +P IC NG CENL GTY+CICN GYE D TGK C D NEC+++ ++C  G C+NTPGSF
Sbjct: 730 DPDICPNGICENLRGTYKCICNSGYEVDSTGKNCVDINECVLNSLLCDNGQCRNTPGSF 788

Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-1-containing microfibrils provide long-term force bearing structural support. Regulates osteoblast maturation by controlling TGF-beta bioavailability and calibrating TGF-beta and BMP levels, respectively.

Bos taurus (taxid: 9913)

>sp|Q61554|FBN1_MOUSE Fibrillin-1 OS=Mus musculus GN=Fbn1 PE=1 SV=1

 Score = 80.9 bits (198), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 37/59 (62%), Positives = 45/59 (76%)

Query: 82  NPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSF 140
           +P IC NG CENL GTY+CICN GYE D TGK C D NEC+++ ++C  G C+NTPGSF
Sbjct: 730 DPDICPNGICENLRGTYKCICNSGYEVDITGKNCVDINECVLNSLLCDNGQCRNTPGSF 788

Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-1-containing microfibrils provide long-term force bearing structural support. Regulates osteoblast maturation by controlling TGF-beta bioavailability and calibrating TGF-beta and BMP levels, respectively.

Mus musculus (taxid: 10090)

>sp|Q61555|FBN2_MOUSE Fibrillin-2 OS=Mus musculus GN=Fbn2 PE=1 SV=2

 Score = 73.9 bits (180), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 33/59 (55%), Positives = 44/59 (74%)

Query: 82  NPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSF 140
           +P IC NG CENL G+YRC CN GYE D +G+ C D +ECL++ ++C  G C+NTPGS+
Sbjct: 768 DPDICANGICENLRGSYRCNCNSGYEPDASGRNCIDIDECLVNRLLCDNGLCRNTPGSY 826

Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-2-containing microfibrils regulate the early process of elastic fiber assembly. Regulates osteoblast maturation by controlling TGF-beta bioavailability and calibrating TGF-beta and BMP levels, respectively.

Mus musculus (taxid: 10090)

>sp|P35556|FBN2_HUMAN Fibrillin-2 OS=Homo sapiens GN=FBN2 PE=1 SV=3

 Score = 73.9 bits (180), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 33/59 (55%), Positives = 44/59 (74%)

Query: 82  NPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSF 140
           +P IC NG CENL G+YRC CN GYE D +G+ C D +ECL++ ++C  G C+NTPGS+
Sbjct: 775 DPDICANGICENLRGSYRCNCNSGYEPDASGRNCIDIDECLVNRLLCDNGLCRNTPGSY 833

Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-2-containing microfibrils regulate the early process of elastic fiber assembly. Regulates osteoblast maturation by controlling TGF-beta bioavailability and calibrating TGF-beta and BMP levels, respectively.

Homo sapiens (taxid: 9606)

>sp|Q75N90|FBN3_HUMAN Fibrillin-3 OS=Homo sapiens GN=FBN3 PE=2 SV=3

 Score = 73.6 bits (179), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 30/59 (50%), Positives = 44/59 (74%)

Query: 82  NPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSF 140
           +P +C NG CENL G+YRC+CN GYE   +GK C+D +EC ++ ++C  G C+N+PGS+
Sbjct: 689 DPEVCANGVCENLRGSYRCVCNLGYEAGASGKDCTDVDECALNSLLCDNGWCQNSPGSY 747

Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-containing microfibrils provide long-term force bearing structural support.

Homo sapiens (taxid: 9606)

>sp|Q8CG19|LTBP1_MOUSE Latent-transforming growth factor beta-binding protein 1 OS=Mus musculus GN=Ltbp1 PE=2 SV=2

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 36/62 (58%)

Query: 85   ICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSFQSNF 144
            +C++G C N  G+++C+CN GY     G  C D NECL D  +C GG C NT GS+    
Sbjct: 1121 LCSHGQCRNTEGSFQCVCNQGYRASVLGDHCEDINECLEDSSVCQGGDCINTAGSYDCTC 1180

Query: 145  QD 146
             D
Sbjct: 1181 PD 1182

May be involved in the assembly, secretion and targeting of TGFB1 to sites at which it is stored and/or activated. May play critical roles in controlling and directing the activity of TGFB1. May have a structural role in the extra cellular matrix (ECM).

Mus musculus (taxid: 10090)

>sp|Q00918|LTBP1_RAT Latent-transforming growth factor beta-binding protein 1 OS=Rattus norvegicus GN=Ltbp1 PE=1 SV=1

 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 36/62 (58%)

Query: 85   ICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSFQSNF 144
            +C++G C N  G+++C+CN GY     G  C D NECL D  +C GG C NT GS+    
Sbjct: 1121 LCSHGQCRNTEGSFQCLCNQGYRASVLGDHCEDINECLEDSSVCQGGDCINTAGSYDCTC 1180

Query: 145  QD 146
             D
Sbjct: 1181 PD 1182

May be involved in the assembly, secretion and targeting of TGFB1 to sites at which it is stored and/or activated. May play critical roles in controlling and directing the activity of TGFB1. May have a structural role in the extra cellular matrix (ECM).

Rattus norvegicus (taxid: 10116)

>sp|O08999|LTBP2_MOUSE Latent-transforming growth factor beta-binding protein 2 OS=Mus musculus GN=Ltbp2 PE=1 SV=2

 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/58 (51%), Positives = 35/58 (60%), Gaps = 1/58 (1%)

Query: 83   PGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSF 140
            PGICT+G C N+ G++RC C PGYE  P  K C D +EC      C  G C NT GSF
Sbjct: 1008 PGICTHGRCINMEGSFRCSCEPGYEVTPDKKGCRDVDECASRAS-CPTGLCLNTEGSF 1064

May play an integral structural role in elastic-fiber architectural organization and/or assembly. May be involved in the assembly, secretion and targeting of TGF- beta to sites at which it is stored and/or activated. May play critical roles in controlling and directing the activity of TGF-beta. May have a structural role in the extra cellular matrix (ECM).

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	153
321472519	2762	hypothetical protein DAPPUDRAFT_315775 [	0.555	0.030	0.521	3e-19
189234367	2933	PREDICTED: similar to fibrillin 2 [Tribo	0.418	0.021	0.661	1e-18
270001930	2865	hypothetical protein TcasGA2_TC000836 [T	0.418	0.022	0.661	1e-18
322786654	158	hypothetical protein SINV_00502 [Solenop	0.424	0.411	0.661	6e-18
328715164	3100	PREDICTED: fibrillin-2-like [Acyrthosiph	0.758	0.037	0.466	1e-17
328787226	2870	PREDICTED: fibrillin-2-like [Apis mellif	0.405	0.021	0.661	1e-17
380016550	2868	PREDICTED: fibrillin-2-like [Apis florea	0.418	0.022	0.661	1e-17
307196014	2862	Fibrillin-2 [Harpegnathos saltator]	0.385	0.020	0.693	2e-17
332018680	2757	Fibrillin-2 [Acromyrmex echinatior]	0.385	0.021	0.693	2e-17
383864528	2865	PREDICTED: fibrillin-2-like [Megachile r	0.405	0.021	0.661	4e-17

>gi|321472519|gb|EFX83489.1| hypothetical protein DAPPUDRAFT_315775 [Daphnia pulex]

 Score =  100 bits (248), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 48/92 (52%), Positives = 64/92 (69%), Gaps = 7/92 (7%)

Query: 52  ESQDLERLKFGLEPPTSRSEVHGAN--HHTTENPGICTNGACENLMGTYRCICNPGYEGD 109
           +S++ E+L      P    + H  +  +   +NP ICTNGACENL+GTYRCICNPGY+ D
Sbjct: 597 DSEEFEQLC-----PFGSGKTHSGDDINECAQNPNICTNGACENLLGTYRCICNPGYQVD 651

Query: 110 PTGKLCSDQNECLMDVMICSGGTCKNTPGSFQ 141
            +GK C+D NEC +D ++C GG C+NTPGSFQ
Sbjct: 652 SSGKTCTDINECAVDNLLCDGGQCRNTPGSFQ 683

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189234367|ref|XP_974344.2| PREDICTED: similar to fibrillin 2 [Tribolium castaneum]

 Score = 98.2 bits (243), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 43/65 (66%), Positives = 54/65 (83%)

Query: 77  HHTTENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNT 136
           +   +NP IC NGACENL+GTYRCICNPG+E D TGK+C+D NEC ++ ++CSGG C+NT
Sbjct: 741 NECAQNPNICQNGACENLIGTYRCICNPGFEVDETGKICTDINECEVEQLVCSGGQCRNT 800

Query: 137 PGSFQ 141
           PGSFQ
Sbjct: 801 PGSFQ 805

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270001930|gb|EEZ98377.1| hypothetical protein TcasGA2_TC000836 [Tribolium castaneum]

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 43/65 (66%), Positives = 54/65 (83%)

Query: 77  HHTTENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNT 136
           +   +NP IC NGACENL+GTYRCICNPG+E D TGK+C+D NEC ++ ++CSGG C+NT
Sbjct: 739 NECAQNPNICQNGACENLIGTYRCICNPGFEVDETGKICTDINECEVEQLVCSGGQCRNT 798

Query: 137 PGSFQ 141
           PGSFQ
Sbjct: 799 PGSFQ 803

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322786654|gb|EFZ13038.1| hypothetical protein SINV_00502 [Solenopsis invicta]

 Score = 95.5 bits (236), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 43/65 (66%), Positives = 51/65 (78%)

Query: 77  HHTTENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNT 136
           +   +NP IC NG CENLMGTYRCIC+ GYE D TGK+CSD NEC ++  +CSGG C+NT
Sbjct: 81  NECAQNPNICINGGCENLMGTYRCICDNGYEVDATGKICSDINECELEDSLCSGGQCRNT 140

Query: 137 PGSFQ 141
           PGSFQ
Sbjct: 141 PGSFQ 145

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328715164|ref|XP_001945971.2| PREDICTED: fibrillin-2-like [Acyrthosiphon pisum]

 Score = 94.7 bits (234), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/120 (46%), Positives = 71/120 (59%), Gaps = 4/120 (3%)

Query: 26  LAVALRRSISIDEFTVHSSTLIALSQESQ--DLERLKF-GLEPPTSRSEVHGAN-HHTTE 81
           L   + +S     + V   T    SQ S+    + L+F GL P  S    +G + +   +
Sbjct: 824 LTTPMTKSSCCCSYGVLGQTPGWGSQCSKCPSPDSLEFKGLCPQGSGMTYNGDDINECAQ 883

Query: 82  NPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSFQ 141
           NP +C+NGACEN +G YRCICN GYE D TGK C D NEC MD  IC+GG C+NTPGSFQ
Sbjct: 884 NPAVCSNGACENTIGNYRCICNSGYEVDDTGKTCKDINECDMDDTICNGGQCRNTPGSFQ 943

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328787226|ref|XP_003250904.1| PREDICTED: fibrillin-2-like [Apis mellifera]

 Score = 94.7 bits (234), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 43/65 (66%), Positives = 51/65 (78%)

Query: 77  HHTTENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNT 136
           +   +NP IC NG CENLMGTYRCIC+ GYE D TGK+CSD NEC ++  +CSGG C+NT
Sbjct: 722 NECAQNPNICVNGGCENLMGTYRCICDSGYEVDATGKICSDINECELEQSLCSGGQCRNT 781

Query: 137 PGSFQ 141
           PGSFQ
Sbjct: 782 PGSFQ 786

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380016550|ref|XP_003692245.1| PREDICTED: fibrillin-2-like [Apis florea]

 Score = 94.7 bits (234), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 43/65 (66%), Positives = 51/65 (78%)

Query: 77  HHTTENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNT 136
           +   +NP IC NG CENLMGTYRCIC+ GYE D TGK+CSD NEC ++  +CSGG C+NT
Sbjct: 721 NECAQNPNICVNGGCENLMGTYRCICDSGYEVDATGKICSDINECELEQSLCSGGQCRNT 780

Query: 137 PGSFQ 141
           PGSFQ
Sbjct: 781 PGSFQ 785

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307196014|gb|EFN77739.1| Fibrillin-2 [Harpegnathos saltator]

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/62 (69%), Positives = 50/62 (80%)

Query: 80  TENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGS 139
            +NP IC NG CENLMGTYRCIC+ GYE D TGK+CSD NEC ++  +CSGG C+NTPGS
Sbjct: 724 AQNPNICINGGCENLMGTYRCICDSGYEVDATGKICSDINECELEDSLCSGGQCRNTPGS 783

Query: 140 FQ 141
           FQ
Sbjct: 784 FQ 785

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332018680|gb|EGI59252.1| Fibrillin-2 [Acromyrmex echinatior]

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/62 (69%), Positives = 50/62 (80%)

Query: 80  TENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGS 139
            +NP IC NG CENLMGTYRCIC+ GYE D TGK+CSD NEC ++  +CSGG C+NTPGS
Sbjct: 617 AQNPNICVNGGCENLMGTYRCICDNGYEVDATGKICSDINECELEDSLCSGGQCRNTPGS 676

Query: 140 FQ 141
           FQ
Sbjct: 677 FQ 678

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383864528|ref|XP_003707730.1| PREDICTED: fibrillin-2-like [Megachile rotundata]

 Score = 92.8 bits (229), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 43/65 (66%), Positives = 50/65 (76%)

Query: 77  HHTTENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNT 136
           +   +NP IC NG CENLMGTYRCIC+ GYE D TGK CSD NEC ++  +CSGG C+NT
Sbjct: 719 NECAQNPNICVNGGCENLMGTYRCICDSGYEVDSTGKQCSDINECELEESLCSGGQCRNT 778

Query: 137 PGSFQ 141
           PGSFQ
Sbjct: 779 PGSFQ 783

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	153
UNIPROTKB|F1PIA3	2871	FBN1 "Uncharacterized protein"	0.385	0.020	0.627	1.5e-17
UNIPROTKB|F1NII7	2822	FBN1 "Uncharacterized protein"	0.385	0.020	0.610	2.4e-17
UNIPROTKB|F1NJQ9	2838	FBN1 "Uncharacterized protein"	0.385	0.020	0.610	2.4e-17
UNIPROTKB|E1C5P6	2869	FBN3 "Uncharacterized protein"	0.385	0.020	0.627	2.4e-17
UNIPROTKB|F1SN67	2336	FBN1 "Fibrillin-1" [Sus scrofa	0.385	0.025	0.627	3.1e-17
UNIPROTKB|P98133	2871	FBN1 "Fibrillin-1" [Bos taurus	0.385	0.020	0.627	3.9e-17
UNIPROTKB|F1N4K8	2871	FBN1 "Fibrillin-1" [Bos taurus	0.385	0.020	0.627	3.9e-17
UNIPROTKB|P35555	2871	FBN1 "Fibrillin-1" [Homo sapie	0.385	0.020	0.627	3.9e-17
UNIPROTKB|Q9TV36	2871	FBN1 "Fibrillin-1" [Sus scrofa	0.385	0.020	0.627	3.9e-17
MGI|MGI:95489	2871	Fbn1 "fibrillin 1" [Mus muscul	0.385	0.020	0.627	6.4e-17

UNIPROTKB|F1PIA3 FBN1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 232 (86.7 bits), Expect = 1.5e-17, P = 1.5e-17
 Identities = 37/59 (62%), Positives = 46/59 (77%)

Query:    82 NPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSF 140
             +P IC NG CENL GTY+CICN GYE DP+GK C D NEC+++ ++C  G C+NTPGSF
Sbjct:   730 DPDICPNGICENLRGTYKCICNSGYEVDPSGKNCVDINECVLNSLLCDNGQCRNTPGSF 788

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005201 "extracellular matrix structural constituent" evidence=IEA

UNIPROTKB|F1NII7 FBN1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 230 (86.0 bits), Expect = 2.4e-17, P = 2.4e-17
 Identities = 36/59 (61%), Positives = 46/59 (77%)

Query:    82 NPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSF 140
             +P +C NG CENL GTY+CICNPGYE D TGK C D +EC+++ ++C  G C+NTPGSF
Sbjct:   672 DPDLCPNGRCENLHGTYKCICNPGYEVDSTGKNCIDIDECVLNTLLCDNGQCRNTPGSF 730

GO:0005201 "extracellular matrix structural constituent" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

GO:0006030 "chitin metabolic process" evidence=IEA

GO:0008061 "chitin binding" evidence=IEA

UNIPROTKB|F1NJQ9 FBN1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 230 (86.0 bits), Expect = 2.4e-17, P = 2.4e-17
 Identities = 36/59 (61%), Positives = 46/59 (77%)

Query:    82 NPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSF 140
             +P +C NG CENL GTY+CICNPGYE D TGK C D +EC+++ ++C  G C+NTPGSF
Sbjct:   688 DPDLCPNGRCENLHGTYKCICNPGYEVDSTGKNCIDIDECVLNTLLCDNGQCRNTPGSF 746

GO:0006030 "chitin metabolic process" evidence=IEA

GO:0008061 "chitin binding" evidence=IEA

GO:0001501 "skeletal system development" evidence=IEA

GO:0001527 "microfibril" evidence=IEA

GO:0005201 "extracellular matrix structural constituent" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005604 "basement membrane" evidence=IEA

GO:0005615 "extracellular space" evidence=IEA

GO:0007507 "heart development" evidence=IEA

UNIPROTKB|E1C5P6 FBN3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 230 (86.0 bits), Expect = 2.4e-17, P = 2.4e-17
 Identities = 37/59 (62%), Positives = 45/59 (76%)

Query:    82 NPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSF 140
             NP IC NG CENL G+YRCICN GYE DPTGK C D +EC ++ ++C  G C+NTPGS+
Sbjct:   729 NPDICPNGMCENLRGSYRCICNLGYESDPTGKNCVDVDECTVNRLLCDNGLCRNTPGSY 787

GO:0005201 "extracellular matrix structural constituent" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

UNIPROTKB|F1SN67 FBN1 "Fibrillin-1" [Sus scrofa (taxid:9823)]

 Score = 228 (85.3 bits), Expect = 3.1e-17, P = 3.1e-17
 Identities = 37/59 (62%), Positives = 45/59 (76%)

Query:    82 NPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSF 140
             +P IC NG CENL GTY+CICN GYE D TGK C D NEC+++ ++C  G C+NTPGSF
Sbjct:   730 DPDICPNGICENLRGTYKCICNSGYEVDSTGKNCVDINECVLNSLLCDNGQCRNTPGSF 788

GO:0007507 "heart development" evidence=IEA

GO:0005615 "extracellular space" evidence=IEA

GO:0005604 "basement membrane" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005201 "extracellular matrix structural constituent" evidence=IEA

GO:0001527 "microfibril" evidence=IEA

GO:0001501 "skeletal system development" evidence=IEA

UNIPROTKB|P98133 FBN1 "Fibrillin-1" [Bos taurus (taxid:9913)]

 Score = 228 (85.3 bits), Expect = 3.9e-17, P = 3.9e-17
 Identities = 37/59 (62%), Positives = 45/59 (76%)

Query:    82 NPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSF 140
             +P IC NG CENL GTY+CICN GYE D TGK C D NEC+++ ++C  G C+NTPGSF
Sbjct:   730 DPDICPNGICENLRGTYKCICNSGYEVDSTGKNCVDINECVLNSLLCDNGQCRNTPGSF 788

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005201 "extracellular matrix structural constituent" evidence=IEA

UNIPROTKB|F1N4K8 FBN1 "Fibrillin-1" [Bos taurus (taxid:9913)]

 Score = 228 (85.3 bits), Expect = 3.9e-17, P = 3.9e-17
 Identities = 37/59 (62%), Positives = 45/59 (76%)

Query:    82 NPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSF 140
             +P IC NG CENL GTY+CICN GYE D TGK C D NEC+++ ++C  G C+NTPGSF
Sbjct:   730 DPDICPNGICENLRGTYKCICNSGYEVDSTGKNCVDINECVLNSLLCDNGQCRNTPGSF 788

GO:0007507 "heart development" evidence=IEA

GO:0005615 "extracellular space" evidence=IEA

GO:0005604 "basement membrane" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005201 "extracellular matrix structural constituent" evidence=IEA

GO:0001527 "microfibril" evidence=IEA

GO:0001501 "skeletal system development" evidence=IEA

UNIPROTKB|P35555 FBN1 "Fibrillin-1" [Homo sapiens (taxid:9606)]

 Score = 228 (85.3 bits), Expect = 3.9e-17, P = 3.9e-17
 Identities = 37/59 (62%), Positives = 45/59 (76%)

Query:    82 NPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSF 140
             +P IC NG CENL GTY+CICN GYE D TGK C D NEC+++ ++C  G C+NTPGSF
Sbjct:   730 DPDICPNGICENLRGTYKCICNSGYEVDSTGKNCVDINECVLNSLLCDNGQCRNTPGSF 788

GO:0001501 "skeletal system development" evidence=IMP

GO:0005578 "proteinaceous extracellular matrix" evidence=IDA

GO:0001527 "microfibril" evidence=IDA

GO:0005201 "extracellular matrix structural constituent" evidence=IDA

GO:0005615 "extracellular space" evidence=IDA

GO:0005509 "calcium ion binding" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005604 "basement membrane" evidence=IDA

GO:0007507 "heart development" evidence=IMP

GO:0005576 "extracellular region" evidence=TAS

GO:0031012 "extracellular matrix" evidence=IDA

GO:0035582 "sequestering of BMP in extracellular matrix" evidence=ISS

GO:0035583 "sequestering of TGFbeta in extracellular matrix" evidence=ISS

UNIPROTKB|Q9TV36 FBN1 "Fibrillin-1" [Sus scrofa (taxid:9823)]

 Score = 228 (85.3 bits), Expect = 3.9e-17, P = 3.9e-17
 Identities = 37/59 (62%), Positives = 45/59 (76%)

Query:    82 NPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSF 140
             +P IC NG CENL GTY+CICN GYE D TGK C D NEC+++ ++C  G C+NTPGSF
Sbjct:   730 DPDICPNGICENLRGTYKCICNSGYEVDSTGKNCVDINECVLNSLLCDNGQCRNTPGSF 788

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005201 "extracellular matrix structural constituent" evidence=IEA

MGI|MGI:95489 Fbn1 "fibrillin 1" [Mus musculus (taxid:10090)]

 Score = 226 (84.6 bits), Expect = 6.4e-17, P = 6.4e-17
 Identities = 37/59 (62%), Positives = 45/59 (76%)

Query:    82 NPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSF 140
             +P IC NG CENL GTY+CICN GYE D TGK C D NEC+++ ++C  G C+NTPGSF
Sbjct:   730 DPDICPNGICENLRGTYKCICNSGYEVDITGKNCVDINECVLNSLLCDNGQCRNTPGSF 788

GO:0001501 "skeletal system development" evidence=ISO

GO:0001527 "microfibril" evidence=ISO;TAS

GO:0001822 "kidney development" evidence=ISO

GO:0005201 "extracellular matrix structural constituent" evidence=ISO

GO:0005509 "calcium ion binding" evidence=ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005576 "extracellular region" evidence=IEA

GO:0005578 "proteinaceous extracellular matrix" evidence=ISO

GO:0005604 "basement membrane" evidence=ISO

GO:0005615 "extracellular space" evidence=ISO

GO:0007507 "heart development" evidence=ISO

GO:0031012 "extracellular matrix" evidence=ISO;IDA

GO:0035582 "sequestering of BMP in extracellular matrix" evidence=IMP

GO:0035583 "sequestering of TGFbeta in extracellular matrix" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	153
smart00181	35	smart00181, EGF, Epidermal growth factor-like doma	7e-06
cd00054	38	cd00054, EGF_CA, Calcium-binding EGF-like domain,	5e-05
smart00179	39	smart00179, EGF_CA, Calcium-binding EGF-like domai	6e-05
pfam12662	24	pfam12662, cEGF, Complement Clr-like EGF-like	2e-04
cd00053	36	cd00053, EGF, Epidermal growth factor domain, foun	2e-04
pfam12947	36	pfam12947, EGF_3, EGF domain	8e-04
pfam07645	42	pfam07645, EGF_CA, Calcium-binding EGF domain	0.003

>gnl|CDD|214544 smart00181, EGF, Epidermal growth factor-like domain

 Score = 40.6 bits (95), Expect = 7e-06
 Identities = 15/31 (48%), Positives = 18/31 (58%)

Query: 81  ENPGICTNGACENLMGTYRCICNPGYEGDPT 111
            + G C+NG C N  G+Y C C PGY GD  
Sbjct: 3   ASGGPCSNGTCINTPGSYTCSCPPGYTGDKR 33

Length = 35

>gnl|CDD|238011 cd00054, EGF_CA, Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

 Score = 38.0 bits (89), Expect = 5e-05
 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)

Query: 81  ENPGICTNGA-CENLMGTYRCICNPGYEGD 109
            +   C NG  C N +G+YRC C PGY G 
Sbjct: 6   ASGNPCQNGGTCVNTVGSYRCSCPPGYTGR 35

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements. Length = 38

>gnl|CDD|214542 smart00179, EGF_CA, Calcium-binding EGF-like domain

 Score = 38.0 bits (89), Expect = 6e-05
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 4/36 (11%)

Query: 81  ENPGICTNGA-CENLMGTYRCICNPGYEGDPTGKLC 115
            +   C NG  C N +G+YRC C PGY     G+ C
Sbjct: 6   ASGNPCQNGGTCVNTVGSYRCECPPGYT---DGRNC 38

Length = 39

>gnl|CDD|221695 pfam12662, cEGF, Complement Clr-like EGF-like

 Score = 36.3 bits (85), Expect = 2e-04
 Identities = 10/23 (43%), Positives = 13/23 (56%)

Query: 98  YRCICNPGYEGDPTGKLCSDQNE 120
           Y C C PGY+    G+ C D +E
Sbjct: 2   YTCSCPPGYQLSGDGRTCEDIDE 24

cEGF, or complement Clr-like EGF, domains have six conserved cysteine residues disulfide-bonded into the characteristic pattern 'ababcc'. They are found in blood coagulation proteins such as fibrillin, Clr and Cls, thrombomodulin, and the LDL receptor. The core fold of the EGF domain consists of two small beta-hairpins packed against each other. Two major structural variants have been identified based on the structural context of the C-terminal cysteine residue of disulfide 'c' in the C-terminal hairpin: hEGFs and cEGFs. In cEGFs the C-terminal thiol resides on the C-terminal beta-sheet, resulting in long loop-lengths between the cysteine residues of disulfide 'c', typically C[10+]XC. These longer loop-lengths may have arisen by selective cysteine loss from a four-disulfide EGF template such as laminin or integrin. Tandem cEGF domains have five linking residues between terminal cysteines of adjacent domains. cEGF domains may or may not bind calcium in the linker region. cEGF domains with the consensus motif CXN4X[F,Y]XCXC are hydroxylated exclusively on the asparagine residue. Length = 24

>gnl|CDD|238010 cd00053, EGF, Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

 Score = 36.3 bits (84), Expect = 2e-04
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)

Query: 81  ENPGICTNGA-CENLMGTYRCICNPGYEGDPT 111
                C+NG  C N  G+YRC+C PGY GD +
Sbjct: 3   AASNPCSNGGTCVNTPGSYRCVCPPGYTGDRS 34

Length = 36

>gnl|CDD|205157 pfam12947, EGF_3, EGF domain

 Score = 34.8 bits (81), Expect = 8e-04
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 3/37 (8%)

Query: 80  TENPGIC-TNGACENLMGTYRCICNPGYEGDPTGKLC 115
            EN G C  N  C N  G++ C C  GY GD  G  C
Sbjct: 2   AENNGGCHPNATCTNTGGSFTCTCKSGYTGD--GVTC 36

This family includes a variety of EGF-like domain homologues. This family includes the C-terminal domain of the malaria parasite MSP1 protein. Length = 36

>gnl|CDD|219496 pfam07645, EGF_CA, Calcium-binding EGF domain

 Score = 33.9 bits (78), Expect = 0.003
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 88  NGACENLMGTYRCICNPGYEGDPTGKLC 115
           N  C N +G++ C+C  GYE +  G  C
Sbjct: 15  NTVCVNTIGSFECVCPDGYENNEDGTNC 42

Length = 42

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	153
KOG1214|consensus	1289		99.3
KOG1219|consensus	4289		99.16
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	98.84
KOG1214|consensus	1289		98.78
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	98.75
KOG4289|consensus	2531		98.71
KOG1219|consensus	4289		98.59
PF12662	24	cEGF: Complement Clr-like EGF-like	98.52
KOG4260|consensus	350		98.37
KOG4289|consensus	2531		98.09
PF14670	36	FXa_inhibition: Coagulation Factor Xa inhibitory s	98.04
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	97.95
KOG4260|consensus	350		97.94
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	97.82
PF12947	36	EGF_3: EGF domain; InterPro: IPR024731 This entry	97.81
PF12947	36	EGF_3: EGF domain; InterPro: IPR024731 This entry	97.66
KOG1217|consensus	487		97.61
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	97.56
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	97.52
PF14670	36	FXa_inhibition: Coagulation Factor Xa inhibitory s	97.45
cd01475	224	vWA_Matrilin VWA_Matrilin: In cartilaginous plate,	97.34
cd01475	224	vWA_Matrilin VWA_Matrilin: In cartilaginous plate,	97.28
KOG1217|consensus	487		97.08
smart00181	35	EGF Epidermal growth factor-like domain.	97.03
cd00053	36	EGF Epidermal growth factor domain, found in epide	96.97
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	96.89
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	96.82
smart00181	35	EGF Epidermal growth factor-like domain.	96.41
cd00053	36	EGF Epidermal growth factor domain, found in epide	96.01
PF06247	197	Plasmod_Pvs28: Plasmodium ookinete surface protein	95.12
KOG1225|consensus	525		92.55
PF12946	37	EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730	92.26
PF12661	13	hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E	90.87
PF07974	32	EGF_2: EGF-like domain; InterPro: IPR013111 A sequ	88.46
PHA03099	139	epidermal growth factor-like protein (EGF-like pro	86.66
PHA03099	139	epidermal growth factor-like protein (EGF-like pro	84.58
PF06247	197	Plasmod_Pvs28: Plasmodium ookinete surface protein	83.11
KOG1225|consensus	525		82.29
PHA02887	126	EGF-like protein; Provisional	80.81
PHA02887	126	EGF-like protein; Provisional	80.28

>KOG1214|consensus

Probab=99.30  E-value=5.1e-12  Score=102.59  Aligned_cols=122  Identities=25%  Similarity=0.363  Sum_probs=89.1

Q ss_pred             eecccCCCCcccCcCCCCCCCeeeCCCcee----cccCCCCccCCCCCCCCcCCc------ccCCCCCCCCCC-CC--ce
Q psy7854          25 RLAVALRRSISIDEFTVHSSTLIALSQESQ----DLERLKFGLEPPTSRSEVHGA------NHHTTENPGICT-NG--AC   91 (153)
Q Consensus        25 ~~~~~~~~c~~i~~c~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~C~~------~~~C~~~~~~C~-~~--~C   91 (153)
                      .+..+.+.|.|++||+.-...|..+..|.+    +.|.|..+|..... +.+|+.      ++.|..+.+.|. ++  .|
T Consensus       723 g~~gdgr~c~d~~eca~~~~~CGp~s~Cin~pg~~rceC~~gy~F~dd-~~tCV~i~~pap~n~Ce~g~h~C~i~g~a~c  801 (1289)
T KOG1214|consen  723 GYQGDGRNCVDENECATGFHRCGPNSVCINLPGSYRCECRSGYEFADD-RHTCVLITPPAPANPCEDGSHTCAIAGQARC  801 (1289)
T ss_pred             ccCCCCCCCCChhhhccCCCCCCCCceeecCCCceeEEEeecceeccC-CcceEEecCCCCCCccccCccccCcCCceEE
Confidence            344578999999999887766666666643    33444445543332 345643      455666556673 33  66


Q ss_pred             eecC-CCceeeCCCCcccCCCCCCCccCccccCCCCCCCC-CeeeecCCCcEEecCCCCCcc
Q psy7854          92 ENLM-GTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSG-GTCKNTPGSFQSNFQDSSPIL  151 (153)
Q Consensus        92 ~~~~-g~~~C~C~~g~~~~~~g~~C~~i~~C~~~~~~C~~-~~C~~~~g~~~C~C~~g~~~~  151 (153)
                      .... ++|.|.|.+||.+  +|..|.++|||  .++.|+. ++|.|++|+|.|.|.+||-++
T Consensus       802 ~~hGgs~y~C~CLPGfsG--DG~~c~dvDeC--~psrChp~A~CyntpgsfsC~C~pGy~GD  859 (1289)
T KOG1214|consen  802 VHHGGSTYSCACLPGFSG--DGHQCTDVDEC--SPSRCHPAATCYNTPGSFSCRCQPGYYGD  859 (1289)
T ss_pred             EecCCceEEEeecCCccC--Ccccccccccc--CccccCCCceEecCCCcceeecccCccCC
Confidence            6554 5799999999988  89999999999  6999985 999999999999999999754

>KOG1219|consensus

Probab=99.16  E-value=6.6e-11  Score=103.72  Aligned_cols=108  Identities=22%  Similarity=0.365  Sum_probs=82.9

Q ss_pred             CCCccc-CcCCCCCCCeeeCCCceec-ccCCCCccCCCCCCCCcC-CcccCCCCCCCCCCCC-ceeecCCCceeeCCCCc
Q psy7854          31 RRSISI-DEFTVHSSTLIALSQESQD-LERLKFGLEPPTSRSEVH-GANHHTTENPGICTNG-ACENLMGTYRCICNPGY  106 (153)
Q Consensus        31 ~~c~~i-~~c~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~C-~~~~~C~~~~~~C~~~-~C~~~~g~~~C~C~~g~  106 (153)
                      .-|.-. +.|..+   .|++++.+.. ...-..+.|++.|.++.| .+++.|..  +||..| +|....+.|.|.|+.||
T Consensus      3858 pgC~l~~d~C~~n---pCqhgG~C~~~~~ggy~CkCpsqysG~~CEi~~epC~s--nPC~~GgtCip~~n~f~CnC~~gy 3932 (4289)
T KOG1219|consen 3858 PGCSLLTDPCNDN---PCQHGGTCISQPKGGYKCKCPSQYSGNHCEIDLEPCAS--NPCLTGGTCIPFYNGFLCNCPNGY 3932 (4289)
T ss_pred             ccccccccccccC---cccCCCEecCCCCCceEEeCcccccCcccccccccccC--CCCCCCCEEEecCCCeeEeCCCCc
Confidence            334433 455444   4555554332 222334457778889999 57899988  899754 99999999999999999


Q ss_pred             ccCCCCCCCc--cCccccCCCCCCCC-CeeeecCCCcEEecCCCCC
Q psy7854         107 EGDPTGKLCS--DQNECLMDVMICSG-GTCKNTPGSFQSNFQDSSP  149 (153)
Q Consensus       107 ~~~~~g~~C~--~i~~C~~~~~~C~~-~~C~~~~g~~~C~C~~g~~  149 (153)
                          .|.+|+  .|+||  ..+.|.+ +.|+|.+|+|.|.|.+||.
T Consensus      3933 ----TG~~Ce~~Gi~eC--s~n~C~~gg~C~n~~gsf~CncT~g~~ 3972 (4289)
T KOG1219|consen 3933 ----TGKRCEARGISEC--SKNVCGTGGQCINIPGSFHCNCTPGIL 3972 (4289)
T ss_pred             ----cCceeeccccccc--ccccccCCceeeccCCceEeccChhHh
Confidence                888995  48999  7899997 9999999999999999985

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=98.84  E-value=2.7e-09  Score=56.78  Aligned_cols=33  Identities=33%  Similarity=0.601  Sum_probs=30.5

Q ss_pred             cCccccCCCCCCC-CCeeeecCCCcEEecCCCCC
Q psy7854         117 DQNECLMDVMICS-GGTCKNTPGSFQSNFQDSSP  149 (153)
Q Consensus       117 ~i~~C~~~~~~C~-~~~C~~~~g~~~C~C~~g~~  149 (153)
                      |||||....+.|. ++.|+|+.|+|.|.|++||.
T Consensus         1 DidEC~~~~~~C~~~~~C~N~~Gsy~C~C~~Gy~   34 (42)
T PF07645_consen    1 DIDECAEGPHNCPENGTCVNTEGSYSCSCPPGYE   34 (42)
T ss_dssp             ESSTTTTTSSSSSTTSEEEEETTEEEEEESTTEE
T ss_pred             CccccCCCCCcCCCCCEEEcCCCCEEeeCCCCcE
Confidence            6899998889998 49999999999999999996

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>KOG1214|consensus

Probab=98.78  E-value=2.4e-08  Score=81.80  Aligned_cols=93  Identities=20%  Similarity=0.361  Sum_probs=75.4

Q ss_pred             ccCCCCccCCCCCCCCcCCcccCCCCCCCCC-CCCceeecCCCceeeCCCCcccCCCCCCCc------cCccccCCCCCC
Q psy7854          56 LERLKFGLEPPTSRSEVHGANHHTTENPGIC-TNGACENLMGTYRCICNPGYEGDPTGKLCS------DQNECLMDVMIC  128 (153)
Q Consensus        56 ~~~~~~~~~~~~~~~~~C~~~~~C~~~~~~C-~~~~C~~~~g~~~C~C~~g~~~~~~g~~C~------~i~~C~~~~~~C  128 (153)
                      .|.|..++...   ++.|.|+++|+...+.| ++..|++.+++|+|.|..||....++.+|.      .++.|..+.+.|
T Consensus       717 tcecs~g~~gd---gr~c~d~~eca~~~~~CGp~s~Cin~pg~~rceC~~gy~F~dd~~tCV~i~~pap~n~Ce~g~h~C  793 (1289)
T KOG1214|consen  717 TCECSSGYQGD---GRNCVDENECATGFHRCGPNSVCINLPGSYRCECRSGYEFADDRHTCVLITPPAPANPCEDGSHTC  793 (1289)
T ss_pred             EEEEeeccCCC---CCCCCChhhhccCCCCCCCCceeecCCCceeEEEeecceeccCCcceEEecCCCCCCccccCcccc
Confidence            44555555433   67899999999988889 588999999999999999999988888885      468899888999


Q ss_pred             C-C--Ceeeec-CCCcEEecCCCCCcc
Q psy7854         129 S-G--GTCKNT-PGSFQSNFQDSSPIL  151 (153)
Q Consensus       129 ~-~--~~C~~~-~g~~~C~C~~g~~~~  151 (153)
                      . +  ++|+.. .+.|.|.|-|||.++
T Consensus       794 ~i~g~a~c~~hGgs~y~C~CLPGfsGD  820 (1289)
T KOG1214|consen  794 AIAGQARCVHHGGSTYSCACLPGFSGD  820 (1289)
T ss_pred             CcCCceEEEecCCceEEEeecCCccCC
Confidence            7 4  567665 456999999999865

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=98.75  E-value=7e-09  Score=55.17  Aligned_cols=38  Identities=42%  Similarity=0.905  Sum_probs=32.3

Q ss_pred             cccCCCCCCCCCC-CCceeecCCCceeeCCCCcccCCCC
Q psy7854          75 ANHHTTENPGICT-NGACENLMGTYRCICNPGYEGDPTG  112 (153)
Q Consensus        75 ~~~~C~~~~~~C~-~~~C~~~~g~~~C~C~~g~~~~~~g  112 (153)
                      |||||....+.|. ++.|+|+.|+|.|.|++||.....+
T Consensus         1 DidEC~~~~~~C~~~~~C~N~~Gsy~C~C~~Gy~~~~~~   39 (42)
T PF07645_consen    1 DIDECAEGPHNCPENGTCVNTEGSYSCSCPPGYELNDDG   39 (42)
T ss_dssp             ESSTTTTTSSSSSTTSEEEEETTEEEEEESTTEEECTTS
T ss_pred             CccccCCCCCcCCCCCEEEcCCCCEEeeCCCCcEECCCC
Confidence            6899998888895 6799999999999999999754443

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>KOG4289|consensus

Probab=98.71  E-value=2.2e-08  Score=85.80  Aligned_cols=77  Identities=31%  Similarity=0.669  Sum_probs=65.8

Q ss_pred             cCCCCCCCCcC-CcccCCCCCCCCCC-CCceeecCCCceeeCCCCcccCCCCCCCc-c--CccccCCCCCCCC-Ceeeec
Q psy7854          63 LEPPTSRSEVH-GANHHTTENPGICT-NGACENLMGTYRCICNPGYEGDPTGKLCS-D--QNECLMDVMICSG-GTCKNT  136 (153)
Q Consensus        63 ~~~~~~~~~~C-~~~~~C~~~~~~C~-~~~C~~~~g~~~C~C~~g~~~~~~g~~C~-~--i~~C~~~~~~C~~-~~C~~~  136 (153)
                      -||++|.+..| ..+|.|-.  ++|. ++.|...+|+|+|.|.+||    .|..|+ +  .-.|  .++.|.| ++|++.
T Consensus      1225 rCPpGFTgd~CeTeiDlCYs--~pC~nng~C~srEggYtCeCrpg~----tGehCEvs~~agrC--vpGvC~nggtC~~~ 1296 (2531)
T KOG4289|consen 1225 RCPPGFTGDYCETEIDLCYS--GPCGNNGRCRSREGGYTCECRPGF----TGEHCEVSARAGRC--VPGVCKNGGTCVNL 1296 (2531)
T ss_pred             eCCCCCCcccccchhHhhhc--CCCCCCCceEEecCceeEEecCCc----cccceeeecccCcc--ccceecCCCEEeec
Confidence            47888999999 57999987  8995 7799999999999999999    778886 2  3457  7899997 899985


Q ss_pred             -CCCcEEecCCC
Q psy7854         137 -PGSFQSNFQDS  147 (153)
Q Consensus       137 -~g~~~C~C~~g  147 (153)
                       .|+|.|.|+.|
T Consensus      1297 ~nggf~c~Cp~g 1308 (2531)
T KOG4289|consen 1297 LNGGFCCHCPYG 1308 (2531)
T ss_pred             CCCceeccCCCc
Confidence             68899999987

>KOG1219|consensus

Probab=98.59  E-value=8.2e-08  Score=85.26  Aligned_cols=73  Identities=25%  Similarity=0.523  Sum_probs=62.6

Q ss_pred             cCCcc-cCCCCCCCCCCCC-ceeecC-CCceeeCCCCcccCCCCCCCc-cCccccCCCCCCCC-CeeeecCCCcEEecCC
Q psy7854          72 VHGAN-HHTTENPGICTNG-ACENLM-GTYRCICNPGYEGDPTGKLCS-DQNECLMDVMICSG-GTCKNTPGSFQSNFQD  146 (153)
Q Consensus        72 ~C~~~-~~C~~~~~~C~~~-~C~~~~-g~~~C~C~~g~~~~~~g~~C~-~i~~C~~~~~~C~~-~~C~~~~g~~~C~C~~  146 (153)
                      .|... +.|..  .||+|+ .|...+ ++|.|.|++.|    .|+.|+ +++.|  ..++|.. ++|+...++|.|.|+.
T Consensus      3859 gC~l~~d~C~~--npCqhgG~C~~~~~ggy~CkCpsqy----sG~~CEi~~epC--~snPC~~GgtCip~~n~f~CnC~~ 3930 (4289)
T KOG1219|consen 3859 GCSLLTDPCND--NPCQHGGTCISQPKGGYKCKCPSQY----SGNHCEIDLEPC--ASNPCLTGGTCIPFYNGFLCNCPN 3930 (4289)
T ss_pred             ccccccccccc--CcccCCCEecCCCCCceEEeCcccc----cCcccccccccc--cCCCCCCCCEEEecCCCeeEeCCC
Confidence            45433 78877  899876 998775 78999999999    889995 89999  7899986 8999999999999999


Q ss_pred             CCCccc
Q psy7854         147 SSPILK  152 (153)
Q Consensus       147 g~~~~~  152 (153)
                      ||.++|
T Consensus      3931 gyTG~~ 3936 (4289)
T KOG1219|consen 3931 GYTGKR 3936 (4289)
T ss_pred             CccCce
Confidence            999875

>PF12662 cEGF: Complement Clr-like EGF-like

Probab=98.52  E-value=8.6e-08  Score=44.27  Aligned_cols=24  Identities=46%  Similarity=1.169  Sum_probs=22.5

Q ss_pred             CceeeCCCCcccCCCCCCCccCcc
Q psy7854          97 TYRCICNPGYEGDPTGKLCSDQNE  120 (153)
Q Consensus        97 ~~~C~C~~g~~~~~~g~~C~~i~~  120 (153)
                      +|.|.|++||.+.++++.|+||||
T Consensus         1 sy~C~C~~Gy~l~~d~~~C~DIdE   24 (24)
T PF12662_consen    1 SYTCSCPPGYQLSPDGRSCEDIDE   24 (24)
T ss_pred             CEEeeCCCCCcCCCCCCccccCCC
Confidence            689999999999999999999987

>KOG4260|consensus

Probab=98.37  E-value=1.8e-07  Score=67.94  Aligned_cols=72  Identities=21%  Similarity=0.461  Sum_probs=56.4

Q ss_pred             CCcCCcccCCCCCCCCCC-CCceeecCCCceeeCCCCcccCCCCCCCccCccccCCCCCCC--CCeeeecCCCcEEecCC
Q psy7854          70 SEVHGANHHTTENPGICT-NGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICS--GGTCKNTPGSFQSNFQD  146 (153)
Q Consensus        70 ~~~C~~~~~C~~~~~~C~-~~~C~~~~g~~~C~C~~g~~~~~~g~~C~~i~~C~~~~~~C~--~~~C~~~~g~~~C~C~~  146 (153)
                      ...|.|||||...+.+|. +..|+|+.|+|.|.+++||..        ++|+|..-...|.  +..|.++.+.|+|+|..
T Consensus       230 e~gCvDvnEC~~ep~~c~~~qfCvNteGSf~C~dk~Gy~~--------g~d~C~~~~d~~~~kn~~c~ni~~~~r~v~f~  301 (350)
T KOG4260|consen  230 EEGCVDVNECQNEPAPCKAHQFCVNTEGSFKCEDKEGYKK--------GVDECQFCADVCASKNRPCMNIDGQYRCVCFS  301 (350)
T ss_pred             ccccccHHHHhcCCCCCChhheeecCCCceEecccccccC--------ChHHhhhhhhhcccCCCCcccCCccEEEEecc
Confidence            447899999998888894 559999999999999999953        2556643224453  47899999999999988


Q ss_pred             CCC
Q psy7854         147 SSP  149 (153)
Q Consensus       147 g~~  149 (153)
                      |+.
T Consensus       302 ~~~  304 (350)
T KOG4260|consen  302 GLI  304 (350)
T ss_pred             cce
Confidence            864

>KOG4289|consensus

Probab=98.09  E-value=3.4e-06  Score=72.99  Aligned_cols=53  Identities=25%  Similarity=0.658  Sum_probs=46.5

Q ss_pred             eecCCCceeeCCCCcccCCCCCCC-ccCccccCCCCCCCC-CeeeecCCCcEEecCCCCCc
Q psy7854          92 ENLMGTYRCICNPGYEGDPTGKLC-SDQNECLMDVMICSG-GTCKNTPGSFQSNFQDSSPI  150 (153)
Q Consensus        92 ~~~~g~~~C~C~~g~~~~~~g~~C-~~i~~C~~~~~~C~~-~~C~~~~g~~~C~C~~g~~~  150 (153)
                      .+..++++|.|++||    .|..| ++||+|  ..++|.+ +.|....|+|.|.|++||.+
T Consensus      1216 i~pvnglrCrCPpGF----Tgd~CeTeiDlC--Ys~pC~nng~C~srEggYtCeCrpg~tG 1270 (2531)
T KOG4289|consen 1216 IHPVNGLRCRCPPGF----TGDYCETEIDLC--YSGPCGNNGRCRSREGGYTCECRPGFTG 1270 (2531)
T ss_pred             ccccCceeEeCCCCC----CcccccchhHhh--hcCCCCCCCceEEecCceeEEecCCccc
Confidence            344577999999999    66789 489999  8999995 99999999999999999975

>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A

Probab=98.04  E-value=3.3e-06  Score=43.10  Aligned_cols=31  Identities=45%  Similarity=1.113  Sum_probs=25.2

Q ss_pred             CCCCCCceeecCCCceeeCCCCcccCCCCCCC
Q psy7854          84 GICTNGACENLMGTYRCICNPGYEGDPTGKLC  115 (153)
Q Consensus        84 ~~C~~~~C~~~~g~~~C~C~~g~~~~~~g~~C  115 (153)
                      +.|.+ .|++.+++|.|.|++||.+.++++.|
T Consensus         6 GgC~h-~C~~~~g~~~C~C~~Gy~L~~D~~tC   36 (36)
T PF14670_consen    6 GGCSH-ICVNTPGSYRCSCPPGYKLAEDGRTC   36 (36)
T ss_dssp             GGSSS-EEEEETTSEEEE-STTEEE-TTSSSE
T ss_pred             CCcCC-CCccCCCceEeECCCCCEECcCCCCC
Confidence            56776 99999999999999999998887764

...

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=97.95  E-value=1.6e-05  Score=40.95  Aligned_cols=32  Identities=34%  Similarity=0.642  Sum_probs=26.6

Q ss_pred             cCccccCCCCCCCC-CeeeecCCCcEEecCCCCC
Q psy7854         117 DQNECLMDVMICSG-GTCKNTPGSFQSNFQDSSP  149 (153)
Q Consensus       117 ~i~~C~~~~~~C~~-~~C~~~~g~~~C~C~~g~~  149 (153)
                      ++++|... .+|.+ +.|+++.|+|.|.|++||.
T Consensus         1 d~~~C~~~-~~C~~~~~C~~~~g~~~C~C~~g~~   33 (39)
T smart00179        1 DIDECASG-NPCQNGGTCVNTVGSYRCECPPGYT   33 (39)
T ss_pred             CcccCcCC-CCcCCCCEeECCCCCeEeECCCCCc
Confidence            46788532 78885 7999999999999999997

>KOG4260|consensus

Probab=97.94  E-value=5.2e-06  Score=60.46  Aligned_cols=52  Identities=29%  Similarity=0.579  Sum_probs=45.1

Q ss_pred             CCcee-eCCCCcccCCCCCCCccCccccCCCCCCCC-CeeeecCCCcEEecCCCCC
Q psy7854          96 GTYRC-ICNPGYEGDPTGKLCSDQNECLMDVMICSG-GTCKNTPGSFQSNFQDSSP  149 (153)
Q Consensus        96 g~~~C-~C~~g~~~~~~g~~C~~i~~C~~~~~~C~~-~~C~~~~g~~~C~C~~g~~  149 (153)
                      ++..| .|+.||.+  +...|.|||||...+.+|.. ..|+|+.|+|.|.+++||.
T Consensus       215 ~~k~C~kCkkGW~l--de~gCvDvnEC~~ep~~c~~~qfCvNteGSf~C~dk~Gy~  268 (350)
T KOG4260|consen  215 SSKGCSKCKKGWKL--DEEGCVDVNECQNEPAPCKAHQFCVNTEGSFKCEDKEGYK  268 (350)
T ss_pred             CCCChhhhccccee--cccccccHHHHhcCCCCCChhheeecCCCceEeccccccc
Confidence            34455 79999988  56789999999999999984 8999999999999999985

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=97.82  E-value=1e-05  Score=40.24  Aligned_cols=29  Identities=21%  Similarity=0.460  Sum_probs=24.5

Q ss_pred             CCCCCCC-CeeeecC-CCcEEecCCCCCccc
Q psy7854         124 DVMICSG-GTCKNTP-GSFQSNFQDSSPILK  152 (153)
Q Consensus       124 ~~~~C~~-~~C~~~~-g~~~C~C~~g~~~~~  152 (153)
                      .+++|.| ++|+... ++|.|.|++||.+.+
T Consensus         2 ~~~~C~n~g~C~~~~~~~y~C~C~~G~~G~~   32 (32)
T PF00008_consen    2 SSNPCQNGGTCIDLPGGGYTCECPPGYTGKR   32 (32)
T ss_dssp             TTTSSTTTEEEEEESTSEEEEEEBTTEESTT
T ss_pred             CCCcCCCCeEEEeCCCCCEEeECCCCCccCC
Confidence            3568886 9999988 999999999998753

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins

Probab=97.81  E-value=1.1e-05  Score=41.17  Aligned_cols=32  Identities=53%  Similarity=1.246  Sum_probs=24.0

Q ss_pred             CCCCC-CCCceeecCCCceeeCCCCcccCCCCCCC
Q psy7854          82 NPGIC-TNGACENLMGTYRCICNPGYEGDPTGKLC  115 (153)
Q Consensus        82 ~~~~C-~~~~C~~~~g~~~C~C~~g~~~~~~g~~C  115 (153)
                      ..+.| .++.|.++.++|.|+|++||.+  +|..|
T Consensus         4 ~~~~C~~nA~C~~~~~~~~C~C~~Gy~G--dG~~C   36 (36)
T PF12947_consen    4 NNGGCHPNATCTNTGGSYTCTCKPGYEG--DGFFC   36 (36)
T ss_dssp             GGGGS-TTCEEEE-TTSEEEEE-CEEEC--CSTCE
T ss_pred             CCCCCCCCcEeecCCCCEEeECCCCCcc--CCcCC
Confidence            34677 5789999999999999999987  55543

; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.

>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins

Probab=97.66  E-value=1.9e-05  Score=40.35  Aligned_cols=30  Identities=27%  Similarity=0.324  Sum_probs=22.1

Q ss_pred             cCCCCCCC-CCeeeecCCCcEEecCCCCCcc
Q psy7854         122 LMDVMICS-GGTCKNTPGSFQSNFQDSSPIL  151 (153)
Q Consensus       122 ~~~~~~C~-~~~C~~~~g~~~C~C~~g~~~~  151 (153)
                      ....+.|+ ++.|++++++|.|.|++||.+.
T Consensus         2 ~~~~~~C~~nA~C~~~~~~~~C~C~~Gy~Gd   32 (36)
T PF12947_consen    2 LENNGGCHPNATCTNTGGSYTCTCKPGYEGD   32 (36)
T ss_dssp             TTGGGGS-TTCEEEE-TTSEEEEE-CEEECC
T ss_pred             CCCCCCCCCCcEeecCCCCEEeECCCCCccC
Confidence            33557787 5999999999999999999754

; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.

>KOG1217|consensus

Probab=97.61  E-value=0.00031  Score=55.27  Aligned_cols=61  Identities=36%  Similarity=0.821  Sum_probs=49.3

Q ss_pred             CceeecCCCceeeCCCCcccCCCCCCCccCccccCCCCCCCC-CeeeecCCCcEEecCCCCCcc
Q psy7854          89 GACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSG-GTCKNTPGSFQSNFQDSSPIL  151 (153)
Q Consensus        89 ~~C~~~~g~~~C~C~~g~~~~~~g~~C~~i~~C~~~~~~C~~-~~C~~~~g~~~C~C~~g~~~~  151 (153)
                      +.|.+..++|+|.|++||.+... ..+.++++|..... |.+ ++|++..+.|.|.|++||.+.
T Consensus       243 ~~c~~~~~~~~C~~~~g~~~~~~-~~~~~~~~C~~~~~-c~~~~~C~~~~~~~~C~C~~g~~g~  304 (487)
T KOG1217|consen  243 GTCVNTVGSYTCRCPEGYTGDAC-VTCVDVDSCALIAS-CPNGGTCVNVPGSYRCTCPPGFTGR  304 (487)
T ss_pred             CcccccCCceeeeCCCCcccccc-ceeeeccccCCCCc-cCCCCeeecCCCcceeeCCCCCCCC
Confidence            57888889999999999966211 35789999975544 876 899999999999999999753

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=97.56  E-value=0.00015  Score=37.20  Aligned_cols=31  Identities=39%  Similarity=0.980  Sum_probs=25.2

Q ss_pred             ccCCCCCCCCCC-CCceeecCCCceeeCCCCcc
Q psy7854          76 NHHTTENPGICT-NGACENLMGTYRCICNPGYE  107 (153)
Q Consensus        76 ~~~C~~~~~~C~-~~~C~~~~g~~~C~C~~g~~  107 (153)
                      +++|... .+|. ++.|.+..++|.|.|++||.
T Consensus         2 ~~~C~~~-~~C~~~~~C~~~~g~~~C~C~~g~~   33 (39)
T smart00179        2 IDECASG-NPCQNGGTCVNTVGSYRCECPPGYT   33 (39)
T ss_pred             cccCcCC-CCcCCCCEeECCCCCeEeECCCCCc
Confidence            5777653 5785 45999999999999999995

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=97.52  E-value=0.00017  Score=36.53  Aligned_cols=33  Identities=30%  Similarity=0.508  Sum_probs=26.3

Q ss_pred             CccccCCCCCCCC-CeeeecCCCcEEecCCCCCcc
Q psy7854         118 QNECLMDVMICSG-GTCKNTPGSFQSNFQDSSPIL  151 (153)
Q Consensus       118 i~~C~~~~~~C~~-~~C~~~~g~~~C~C~~g~~~~  151 (153)
                      +++|... .+|.+ +.|.+..++|.|.|++||.+.
T Consensus         2 ~~~C~~~-~~C~~~~~C~~~~~~~~C~C~~g~~g~   35 (38)
T cd00054           2 IDECASG-NPCQNGGTCVNTVGSYRCSCPPGYTGR   35 (38)
T ss_pred             cccCCCC-CCcCCCCEeECCCCCeEeECCCCCcCC
Confidence            5677422 67875 899999999999999999763

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A

Probab=97.45  E-value=6.6e-05  Score=38.26  Aligned_cols=25  Identities=32%  Similarity=0.542  Sum_probs=20.5

Q ss_pred             CCCCCCCeeeecCCCcEEecCCCCCc
Q psy7854         125 VMICSGGTCKNTPGSFQSNFQDSSPI  150 (153)
Q Consensus       125 ~~~C~~~~C~~~~g~~~C~C~~g~~~  150 (153)
                      .+.|. ..|++++++|+|.|++||.+
T Consensus         5 NGgC~-h~C~~~~g~~~C~C~~Gy~L   29 (36)
T PF14670_consen    5 NGGCS-HICVNTPGSYRCSCPPGYKL   29 (36)
T ss_dssp             GGGSS-SEEEEETTSEEEE-STTEEE
T ss_pred             CCCcC-CCCccCCCceEeECCCCCEE
Confidence            45566 89999999999999999965

...

>cd01475 vWA_Matrilin VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity

Probab=97.34  E-value=0.00025  Score=51.14  Aligned_cols=40  Identities=28%  Similarity=0.639  Sum_probs=34.7

Q ss_pred             CCCCCccCccccCCCCCCCCCeeeecCCCcEEecCCCCCcc
Q psy7854         111 TGKLCSDQNECLMDVMICSGGTCKNTPGSFQSNFQDSSPIL  151 (153)
Q Consensus       111 ~g~~C~~i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~  151 (153)
                      .+..|.++++|....+.|. ..|.++.|+|.|.|++||.+.
T Consensus       180 ~~~~C~~~~~C~~~~~~c~-~~C~~~~g~~~c~c~~g~~~~  219 (224)
T cd01475         180 QGKICVVPDLCATLSHVCQ-QVCISTPGSYLCACTEGYALL  219 (224)
T ss_pred             ccccCcCchhhcCCCCCcc-ceEEcCCCCEEeECCCCccCC
Confidence            3567999999987778887 799999999999999999764

Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands.

>cd01475 vWA_Matrilin VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity

Probab=97.28  E-value=0.00031  Score=50.60  Aligned_cols=42  Identities=19%  Similarity=0.453  Sum_probs=36.0

Q ss_pred             CCcCCcccCCCCCCCCCCCCceeecCCCceeeCCCCcccCCCC
Q psy7854          70 SEVHGANHHTTENPGICTNGACENLMGTYRCICNPGYEGDPTG  112 (153)
Q Consensus        70 ~~~C~~~~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~g  112 (153)
                      +..|.++++|...++.|.+ .|.+..|+|.|.|..||.+.+++
T Consensus       181 ~~~C~~~~~C~~~~~~c~~-~C~~~~g~~~c~c~~g~~~~~~~  222 (224)
T cd01475         181 GKICVVPDLCATLSHVCQQ-VCISTPGSYLCACTEGYALLEDN  222 (224)
T ss_pred             cccCcCchhhcCCCCCccc-eEEcCCCCEEeECCCCccCCCCC
Confidence            6789999999877678876 89999999999999999876554

Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands.

>KOG1217|consensus

Probab=97.08  E-value=0.0036  Score=49.28  Aligned_cols=111  Identities=28%  Similarity=0.519  Sum_probs=68.4

Q ss_pred             CCcccCcCCCCCCCeeeCCCceecccCCCCccCCCCCCCCc---CCcccCCCC--CCCCCCCC-ce--eecCCCceeeCC
Q psy7854          32 RSISIDEFTVHSSTLIALSQESQDLERLKFGLEPPTSRSEV---HGANHHTTE--NPGICTNG-AC--ENLMGTYRCICN  103 (153)
Q Consensus        32 ~c~~i~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---C~~~~~C~~--~~~~C~~~-~C--~~~~g~~~C~C~  103 (153)
                      .+.++++|..... +.+.+.|...... ....+++++.+..   |.+.++|..  ...+|.++ .|  ....+.+.|.|.
T Consensus       267 ~~~~~~~C~~~~~-c~~~~~C~~~~~~-~~C~C~~g~~g~~~~~~~~~~~C~~~~~~~~c~~g~~C~~~~~~~~~~C~c~  344 (487)
T KOG1217|consen  267 TCVDVDSCALIAS-CPNGGTCVNVPGS-YRCTCPPGFTGRLCTECVDVDECSPRNAGGPCANGGTCNTLGSFGGFRCACG  344 (487)
T ss_pred             eeeeccccCCCCc-cCCCCeeecCCCc-ceeeCCCCCCCCCCccccccccccccccCCcCCCCcccccCCCCCCCCcCCC
Confidence            4567777766542 3333444322211 1122444444444   445567753  23557544 67  334457889999


Q ss_pred             CCcccCCCCCCCccCc-cccCCCCCCCC-Ceeee-cCCCcEEecCCCCCc
Q psy7854         104 PGYEGDPTGKLCSDQN-ECLMDVMICSG-GTCKN-TPGSFQSNFQDSSPI  150 (153)
Q Consensus       104 ~g~~~~~~g~~C~~i~-~C~~~~~~C~~-~~C~~-~~g~~~C~C~~g~~~  150 (153)
                      .+|    .+..|+..+ +|.  ...+.+ +.|++ ..+.|.|.|+.+|.+
T Consensus       345 ~~~----~g~~C~~~~~~C~--~~~~~~~~~c~~~~~~~~~c~~~~~~~~  388 (487)
T KOG1217|consen  345 PGF----TGRRCEDSNDECA--SSPCCPGGTCVNETPGSYRCACPAGFAG  388 (487)
T ss_pred             CCC----CCCccccCCcccc--CCccccCCEeccCCCCCeEecCCCcccc
Confidence            886    788999884 895  343554 89998 799999999999864

>smart00181 EGF Epidermal growth factor-like domain

Probab=97.03  E-value=0.0012  Score=32.98  Aligned_cols=25  Identities=40%  Similarity=0.636  Sum_probs=21.3

Q ss_pred             CCCCCCeeeecCCCcEEecCCCCCc
Q psy7854         126 MICSGGTCKNTPGSFQSNFQDSSPI  150 (153)
Q Consensus       126 ~~C~~~~C~~~~g~~~C~C~~g~~~  150 (153)
                      ++|.+++|+++.++|.|.|++||.+
T Consensus         6 ~~C~~~~C~~~~~~~~C~C~~g~~g   30 (35)
T smart00181        6 GPCSNGTCINTPGSYTCSCPPGYTG   30 (35)
T ss_pred             CCCCCCEEECCCCCeEeECCCCCcc
Confidence            5676338999999999999999976

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=96.97  E-value=0.0015  Score=32.38  Aligned_cols=27  Identities=37%  Similarity=0.529  Sum_probs=22.9

Q ss_pred             CCCCCC-CeeeecCCCcEEecCCCCCcc
Q psy7854         125 VMICSG-GTCKNTPGSFQSNFQDSSPIL  151 (153)
Q Consensus       125 ~~~C~~-~~C~~~~g~~~C~C~~g~~~~  151 (153)
                      ..+|.+ +.|+++.+.|.|.|+.||.+.
T Consensus         5 ~~~C~~~~~C~~~~~~~~C~C~~g~~g~   32 (36)
T cd00053           5 SNPCSNGGTCVNTPGSYRCVCPPGYTGD   32 (36)
T ss_pred             CCCCCCCCEEecCCCCeEeECCCCCccc
Confidence            566765 899999999999999999764

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=96.89  E-value=0.002  Score=32.44  Aligned_cols=32  Identities=41%  Similarity=1.027  Sum_probs=24.4

Q ss_pred             ccCCCCCCCCCC-CCceeecCCCceeeCCCCccc
Q psy7854          76 NHHTTENPGICT-NGACENLMGTYRCICNPGYEG  108 (153)
Q Consensus        76 ~~~C~~~~~~C~-~~~C~~~~g~~~C~C~~g~~~  108 (153)
                      +++|... .+|. ++.|.+..+.|.|.|+.||.+
T Consensus         2 ~~~C~~~-~~C~~~~~C~~~~~~~~C~C~~g~~g   34 (38)
T cd00054           2 IDECASG-NPCQNGGTCVNTVGSYRCSCPPGYTG   34 (38)
T ss_pred             cccCCCC-CCcCCCCEeECCCCCeEeECCCCCcC
Confidence            4667542 4685 458999999999999999943

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=96.82  E-value=0.00098  Score=32.98  Aligned_cols=25  Identities=52%  Similarity=1.250  Sum_probs=21.5

Q ss_pred             CCCCC-CceeecC-CCceeeCCCCccc
Q psy7854          84 GICTN-GACENLM-GTYRCICNPGYEG  108 (153)
Q Consensus        84 ~~C~~-~~C~~~~-g~~~C~C~~g~~~  108 (153)
                      .+|.+ ++|+... +.|.|.|++||.+
T Consensus         4 ~~C~n~g~C~~~~~~~y~C~C~~G~~G   30 (32)
T PF00008_consen    4 NPCQNGGTCIDLPGGGYTCECPPGYTG   30 (32)
T ss_dssp             TSSTTTEEEEEESTSEEEEEEBTTEES
T ss_pred             CcCCCCeEEEeCCCCCEEeECCCCCcc
Confidence            68864 5999998 9999999999954

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>smart00181 EGF Epidermal growth factor-like domain

Probab=96.41  E-value=0.0069  Score=30.12  Aligned_cols=25  Identities=56%  Similarity=1.350  Sum_probs=20.4

Q ss_pred             CCCCCCceeecCCCceeeCCCCccc
Q psy7854          84 GICTNGACENLMGTYRCICNPGYEG  108 (153)
Q Consensus        84 ~~C~~~~C~~~~g~~~C~C~~g~~~  108 (153)
                      .+|.++.|.+..++|.|.|++||.+
T Consensus         6 ~~C~~~~C~~~~~~~~C~C~~g~~g   30 (35)
T smart00181        6 GPCSNGTCINTPGSYTCSCPPGYTG   30 (35)
T ss_pred             CCCCCCEEECCCCCeEeECCCCCcc
Confidence            4675338999999999999999955

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=96.01  E-value=0.015  Score=28.59  Aligned_cols=25  Identities=52%  Similarity=1.363  Sum_probs=21.1

Q ss_pred             CCCC-CCceeecCCCceeeCCCCccc
Q psy7854          84 GICT-NGACENLMGTYRCICNPGYEG  108 (153)
Q Consensus        84 ~~C~-~~~C~~~~g~~~C~C~~g~~~  108 (153)
                      .+|. ++.|.+..+.|.|.|+.||.+
T Consensus         6 ~~C~~~~~C~~~~~~~~C~C~~g~~g   31 (36)
T cd00053           6 NPCSNGGTCVNTPGSYRCVCPPGYTG   31 (36)
T ss_pred             CCCCCCCEEecCCCCeEeECCCCCcc
Confidence            6674 468999999999999999955

>PF06247 Plasmod_Pvs28: Plasmodium ookinete surface protein Pvs28; InterPro: IPR010423 This family consists of several ookinete surface protein (Pvs28) from several species of Plasmodium

Probab=95.12  E-value=0.007  Score=42.12  Aligned_cols=66  Identities=21%  Similarity=0.521  Sum_probs=45.3

Q ss_pred             CCCCCCceeecCCCceeeCCCCcccCCCCCCCccCccccC---CCCCCCC-CeeeecC-----CCcEEecCCCCCc
Q psy7854          84 GICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLM---DVMICSG-GTCKNTP-----GSFQSNFQDSSPI  150 (153)
Q Consensus        84 ~~C~~~~C~~~~g~~~C~C~~g~~~~~~g~~C~~i~~C~~---~~~~C~~-~~C~~~~-----g~~~C~C~~g~~~  150 (153)
                      ..|.++........|.|.|..||.+. +...|+...+|..   ...+|.. +.|++.+     ..|.|.|.+||.+
T Consensus         6 T~CKNG~LiQMSNHfEC~Cnegfvl~-~EntCE~kv~C~~~e~~~K~Cgdya~C~~~~~~~~~~~~~C~C~~gY~~   80 (197)
T PF06247_consen    6 TICKNGYLIQMSNHFECKCNEGFVLK-NENTCEEKVECDKLENVNKPCGDYAKCINQANKGEERAYKCDCINGYIL   80 (197)
T ss_dssp             ---BTEEEEEESSEEEEEESTTEEEE-ETTEEEE----SG-GGTTSEEETTEEEEE-SSTTSSTSEEEEE-TTEEE
T ss_pred             ccccCCEEEEccCceEEEcCCCcEEc-cccccccceecCcccccCccccchhhhhcCCCcccceeEEEecccCcee
Confidence            56777888888899999999999774 4568887777753   2366876 8998865     5699999999964

Pvs25 and Pvs28 are expressed on the surface of ookinetes. These proteins are potential candidates for vaccine and induce antibodies that block the infectivity of Plasmodium vivax in immunised animals [].; GO: 0009986 cell surface, 0016020 membrane; PDB: 1Z3G_B 1Z1Y_B 1Z27_A.

>KOG1225|consensus

Probab=92.55  E-value=0.44  Score=38.75  Aligned_cols=69  Identities=35%  Similarity=0.709  Sum_probs=33.9

Q ss_pred             CccCCCCCCCCcCCcccCCCCCCCCCC-CCceeecCCCceeeCCCCcccCCCCCCCccCccccCCCCCCCC-CeeeecCC
Q psy7854          61 FGLEPPTSRSEVHGANHHTTENPGICT-NGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSG-GTCKNTPG  138 (153)
Q Consensus        61 ~~~~~~~~~~~~C~~~~~C~~~~~~C~-~~~C~~~~g~~~C~C~~g~~~~~~g~~C~~i~~C~~~~~~C~~-~~C~~~~g  138 (153)
                      ...++++|.+..|... .|..   .|. ++.+.  .+  .|.|.+||    .|..|+... |   +..|.+ +.|+  .|
T Consensus       266 ~CIC~~Gf~G~dC~e~-~Cp~---~cs~~g~~~--~g--~CiC~~g~----~G~dCs~~~-c---padC~g~G~Ci--~G  327 (525)
T KOG1225|consen  266 RCICPPGFTGDDCDEL-VCPV---DCSGGGVCV--DG--ECICNPGY----SGKDCSIRR-C---PADCSGHGKCI--DG  327 (525)
T ss_pred             eEeCCCCCcCCCCCcc-cCCc---ccCCCceec--CC--EeecCCCc----ccccccccc-C---CccCCCCCccc--CC
Confidence            3346666666666431 2322   242 22222  22  67888888    555554221 3   344543 5664  22


Q ss_pred             CcEEecCCCCC
Q psy7854         139 SFQSNFQDSSP  149 (153)
Q Consensus       139 ~~~C~C~~g~~  149 (153)
                        +|.|.+||.
T Consensus       328 --~C~C~~Gy~  336 (525)
T KOG1225|consen  328 --ECLCDEGYT  336 (525)
T ss_pred             --ceEeCCCCc
Confidence              566666664

>PF12946 EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730 This EGF-like domain is found at the C terminus of the malaria parasite MSP1 protein

Probab=92.26  E-value=0.097  Score=26.62  Aligned_cols=25  Identities=16%  Similarity=0.142  Sum_probs=17.5

Q ss_pred             CCCCC-CCeeeecC-CCcEEecCCCCC
Q psy7854         125 VMICS-GGTCKNTP-GSFQSNFQDSSP  149 (153)
Q Consensus       125 ~~~C~-~~~C~~~~-g~~~C~C~~g~~  149 (153)
                      ...|. |+.|++.. |.+.|+|-+||.
T Consensus         4 ~~~cP~NA~C~~~~dG~eecrCllgyk   30 (37)
T PF12946_consen    4 DTKCPANAGCFRYDDGSEECRCLLGYK   30 (37)
T ss_dssp             SS---TTEEEEEETTSEEEEEE-TTEE
T ss_pred             CccCCCCcccEEcCCCCEEEEeeCCcc
Confidence            35666 58999876 999999999995

MSP1 is the merozoite surface protein 1. This domain is part of the C-terminal fragment that is proteolytically processed from the the rest of the protein and is left attached to the surface of the invading parasite [].; PDB: 1N1I_C 2FLG_A 1CEJ_A 2NPR_A 1B9W_A 1OB1_F.

>PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A

Probab=90.87  E-value=0.12  Score=20.08  Aligned_cols=10  Identities=50%  Similarity=1.491  Sum_probs=6.8

Q ss_pred             eeeCCCCccc
Q psy7854          99 RCICNPGYEG  108 (153)
Q Consensus        99 ~C~C~~g~~~  108 (153)
                      .|.|++||.+
T Consensus         1 ~C~C~~G~~G   10 (13)
T PF12661_consen    1 TCQCPPGWTG   10 (13)
T ss_dssp             EEEE-TTEET
T ss_pred             CccCcCCCcC
Confidence            4889999943

>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=88.46  E-value=1.1  Score=21.97  Aligned_cols=24  Identities=29%  Similarity=0.400  Sum_probs=18.0

Q ss_pred             CCCCC-CeeeecCCCcEEecCCCCCcc
Q psy7854         126 MICSG-GTCKNTPGSFQSNFQDSSPIL  151 (153)
Q Consensus       126 ~~C~~-~~C~~~~g~~~C~C~~g~~~~  151 (153)
                      ..|.+ ++|+..  ..+|.|.+||.+.
T Consensus         6 ~~C~~~G~C~~~--~g~C~C~~g~~G~   30 (32)
T PF07974_consen    6 NICSGHGTCVSP--CGRCVCDSGYTGP   30 (32)
T ss_pred             CccCCCCEEeCC--CCEEECCCCCcCC
Confidence            35764 899765  3589999999764

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins

>PHA03099 epidermal growth factor-like protein (EGF-like protein); Provisional

Probab=86.66  E-value=0.77  Score=30.12  Aligned_cols=35  Identities=11%  Similarity=0.186  Sum_probs=24.0

Q ss_pred             CccccCC-CCCCCCCeeeec--CCCcEEecCCCCCccc
Q psy7854         118 QNECLMD-VMICSGGTCKNT--PGSFQSNFQDSSPILK  152 (153)
Q Consensus       118 i~~C~~~-~~~C~~~~C~~~--~g~~~C~C~~g~~~~~  152 (153)
                      +.+|... .+.|-|+.|...  ...+.|.|..||.+.|
T Consensus        42 i~~Cp~ey~~YClHG~C~yI~dl~~~~CrC~~GYtGeR   79 (139)
T PHA03099         42 IRLCGPEGDGYCLHGDCIHARDIDGMYCRCSHGYTGIR   79 (139)
T ss_pred             cccCChhhCCEeECCEEEeeccCCCceeECCCCccccc
Confidence            4455322 356766788654  4778999999998876

>PHA03099 epidermal growth factor-like protein (EGF-like protein); Provisional

Probab=84.58  E-value=1.1  Score=29.47  Aligned_cols=32  Identities=34%  Similarity=0.788  Sum_probs=24.7

Q ss_pred             CCCCCCceeecC--CCceeeCCCCcccCCCCCCCccCc
Q psy7854          84 GICTNGACENLM--GTYRCICNPGYEGDPTGKLCSDQN  119 (153)
Q Consensus        84 ~~C~~~~C~~~~--g~~~C~C~~g~~~~~~g~~C~~i~  119 (153)
                      +.|-||.|.-..  ..+.|.|..||    .|.+|+-.+
T Consensus        51 ~YClHG~C~yI~dl~~~~CrC~~GY----tGeRCEh~d   84 (139)
T PHA03099         51 GYCLHGDCIHARDIDGMYCRCSHGY----TGIRCQHVV   84 (139)
T ss_pred             CEeECCEEEeeccCCCceeECCCCc----cccccccee
Confidence            567777887654  78999999999    778887543

>PF06247 Plasmod_Pvs28: Plasmodium ookinete surface protein Pvs28; InterPro: IPR010423 This family consists of several ookinete surface protein (Pvs28) from several species of Plasmodium

Probab=83.11  E-value=0.47  Score=33.23  Aligned_cols=88  Identities=19%  Similarity=0.314  Sum_probs=48.2

Q ss_pred             eecccCCCCccCCCCCCCCcCCcccCCCCCCCCCCCCceeecC---CCceeeCCCCcccCCCCCCCc--cCccccCCCCC
Q psy7854          53 SQDLERLKFGLEPPTSRSEVHGANHHTTENPGICTNGACENLM---GTYRCICNPGYEGDPTGKLCS--DQNECLMDVMI  127 (153)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~C~~~~~C~~~~~~C~~~~C~~~~---g~~~C~C~~g~~~~~~g~~C~--~i~~C~~~~~~  127 (153)
                      ....|.|..+|.....   .|. .+.|..  -.|..+.|+-.+   ....|+|.-|+.. .+...|+  ...+|.   -.
T Consensus        68 ~~~~C~C~~gY~~~~~---vCv-p~~C~~--~~Cg~GKCI~d~~~~~~~~CSC~IGkV~-~dn~kCtk~G~T~C~---LK  137 (197)
T PF06247_consen   68 RAYKCDCINGYILKQG---VCV-PNKCNN--KDCGSGKCILDPDNPNNPTCSCNIGKVP-DDNKKCTKTGETKCS---LK  137 (197)
T ss_dssp             TSEEEEE-TTEEESSS---SEE-EGGGSS-----TTEEEEEEEGGGSEEEEEE-TEEET-TTTTESEEEE----------
T ss_pred             eeEEEecccCceeeCC---eEc-hhhcCc--eecCCCeEEecCCCCCCceeEeeeceEe-ccCCcccCCCcccee---ee
Confidence            3455666667655432   453 234544  457667786543   3458999999983 2566774  445673   44


Q ss_pred             CC-CCeeeecCCCcEEecCCCCCc
Q psy7854         128 CS-GGTCKNTPGSFQSNFQDSSPI  150 (153)
Q Consensus       128 C~-~~~C~~~~g~~~C~C~~g~~~  150 (153)
                      |. +..|....+-|+|.|.+||.+
T Consensus       138 Ck~nE~CK~~~~~Y~C~~~~~~~~  161 (197)
T PF06247_consen  138 CKENEECKLVDGYYKCVCKEGFPG  161 (197)
T ss_dssp             -TTTEEEEEETTEEEEEE-TT-EE
T ss_pred             cCCCcceeeeCcEEEeecCCCCCC
Confidence            65 479999999999999999864

Pvs25 and Pvs28 are expressed on the surface of ookinetes. These proteins are potential candidates for vaccine and induce antibodies that block the infectivity of Plasmodium vivax in immunised animals [].; GO: 0009986 cell surface, 0016020 membrane; PDB: 1Z3G_B 1Z1Y_B 1Z27_A.

>KOG1225|consensus

Probab=82.29  E-value=3.2  Score=33.98  Aligned_cols=61  Identities=30%  Similarity=0.675  Sum_probs=34.9

Q ss_pred             CCCCCCCCcCCcccCCCCCCCCC-CCCceeecCCCceeeCCCCcccCCCCCCCccCccccCCCCCCCC-CeeeecCCCcE
Q psy7854          64 EPPTSRSEVHGANHHTTENPGIC-TNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSG-GTCKNTPGSFQ  141 (153)
Q Consensus        64 ~~~~~~~~~C~~~~~C~~~~~~C-~~~~C~~~~g~~~C~C~~g~~~~~~g~~C~~i~~C~~~~~~C~~-~~C~~~~g~~~  141 (153)
                      +.++|.+..|.... |.   ..| .++.|+    .-+|.|.+||    .|..|....        |.+ +.|++.     
T Consensus       300 C~~g~~G~dCs~~~-cp---adC~g~G~Ci----~G~C~C~~Gy----~G~~C~~~~--------C~~~g~cv~g-----  354 (525)
T KOG1225|consen  300 CNPGYSGKDCSIRR-CP---ADCSGHGKCI----DGECLCDEGY----TGELCIQRA--------CSGGGQCVNG-----  354 (525)
T ss_pred             cCCCcccccccccc-CC---ccCCCCCccc----CCceEeCCCC----cCCcccccc--------cCCCceeccC-----
Confidence            44455555554222 32   456 366776    3478999999    566664432        444 566442     


Q ss_pred             EecCCCCC
Q psy7854         142 SNFQDSSP  149 (153)
Q Consensus       142 C~C~~g~~  149 (153)
                      |.|..||.
T Consensus       355 C~C~~Gw~  362 (525)
T KOG1225|consen  355 CKCKKGWR  362 (525)
T ss_pred             ceeccCcc
Confidence            66777775

>PHA02887 EGF-like protein; Provisional

Probab=80.81  E-value=1.6  Score=28.19  Aligned_cols=27  Identities=15%  Similarity=0.215  Sum_probs=20.0

Q ss_pred             CCCCCCeeeec--CCCcEEecCCCCCccc
Q psy7854         126 MICSGGTCKNT--PGSFQSNFQDSSPILK  152 (153)
Q Consensus       126 ~~C~~~~C~~~--~g~~~C~C~~g~~~~~  152 (153)
                      +.|-++.|...  .....|.|+.||.+.|
T Consensus        92 ~YCiHG~C~yI~dL~epsCrC~~GYtG~R  120 (126)
T PHA02887         92 DFCINGECMNIIDLDEKFCICNKGYTGIR  120 (126)
T ss_pred             CEeeCCEEEccccCCCceeECCCCcccCC
Confidence            55656788653  4558899999998765

>PHA02887 EGF-like protein; Provisional

Probab=80.28  E-value=1.9  Score=27.88  Aligned_cols=31  Identities=45%  Similarity=1.059  Sum_probs=23.6

Q ss_pred             CCCCCCceeec--CCCceeeCCCCcccCCCCCCCccC
Q psy7854          84 GICTNGACENL--MGTYRCICNPGYEGDPTGKLCSDQ  118 (153)
Q Consensus        84 ~~C~~~~C~~~--~g~~~C~C~~g~~~~~~g~~C~~i  118 (153)
                      +.|-||.|.-.  .....|.|..||    .|.+|+..
T Consensus        92 ~YCiHG~C~yI~dL~epsCrC~~GY----tG~RCE~v  124 (126)
T PHA02887         92 DFCINGECMNIIDLDEKFCICNKGY----TGIRCDEV  124 (126)
T ss_pred             CEeeCCEEEccccCCCceeECCCCc----ccCCCCcc
Confidence            56777888765  466899999999    77788654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	153
1lmj_A	86	Nmr Study Of The Fibrillin-1 Cbegf12-13 Pair Of Ca2		1e-06

>pdb|1LMJ|A Chain A, Nmr Study Of The Fibrillin-1 Cbegf12-13 Pair Of Ca2+ Binding Epidermal Growth Factor-like Domains Length = 86

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 82  NPGICTNGACENLMGTYRCICNPGYE-GDPTGKLCSDQNECLMDVMICSGGTCKNTPGSF 140
           +P +C  G C N  G + C C+ GYE G    K C D +EC  D ++C GG C NT GS+
Sbjct: 9   SPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGVCHNTEGSY 68
Query: 141 Q 141
           +
Sbjct: 69  R 69

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	153
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	1e-19
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	2e-08
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	3e-04
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	7e-18
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	4e-16
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	1e-05
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	2e-15
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	1e-13
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	2e-08
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	5e-08
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	3e-13
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	1e-10
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	3e-09
2bou_A	143	EGF-like module containing mucin-like hormone rece	2e-11
2bou_A	143	EGF-like module containing mucin-like hormone rece	7e-09
2bou_A	143	EGF-like module containing mucin-like hormone rece	2e-08
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	6e-10
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	7e-10
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	2e-04
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	5e-09
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	4e-05
1aut_L	114	Activated protein C; serine proteinase, plasma cal	5e-09
1aut_L	114	Activated protein C; serine proteinase, plasma cal	6e-05
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	2e-08
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	4e-06
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	8e-08
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	1e-06
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	2e-04
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	3e-07
2vh0_B	134	Activated factor XA light chain; serine protease,	1e-06
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	2e-06
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	5e-04
3v65_B	386	Low-density lipoprotein receptor-related protein;	2e-06
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	3e-06
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	8e-06
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	1e-05
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	5e-06
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	7e-06
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	2e-05
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	2e-05
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	1e-04
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	2e-04
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	5e-04
1szb_A	170	Mannose binding lectin-associated serine protease-	6e-04
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	6e-04
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	8e-04
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	8e-04

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 Length = 86

 Score = 76.9 bits (190), Expect = 1e-19
 Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 1/63 (1%)

Query: 80  TENPGICTNGACENLMGTYRCICNPGYEGDPT-GKLCSDQNECLMDVMICSGGTCKNTPG 138
             +P +C  G C N  G + C C+ GYE      K C D +EC  D ++C GG C NT G
Sbjct: 7   RISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGVCHNTEG 66

Query: 139 SFQ 141
           S++
Sbjct: 67  SYR 69

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 Length = 86

 Score = 48.1 bits (115), Expect = 2e-08
 Identities = 14/36 (38%), Positives = 19/36 (52%)

Query: 80  TENPGICTNGACENLMGTYRCICNPGYEGDPTGKLC 115
             +P +C  G C N  G+YRC C PG++  P    C
Sbjct: 50  QRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISAC 85

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 Length = 86

 Score = 36.9 bits (86), Expect = 3e-04
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 116 SDQNECLMDVMICSGGTCKNTPGSFQ 141
           +D +EC +   +C  G C NTPG F+
Sbjct: 1   TDIDECRISPDLCGRGQCVNTPGDFE 26

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens} Length = 87

 Score = 72.7 bits (179), Expect = 7e-18
 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 3/62 (4%)

Query: 80  TENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGS 139
           +  P IC    C+N+ G + C C  GY  +   K C D +EC  +  +C+   C N PG 
Sbjct: 7   SLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECSEN--MCA-QLCVNYPGG 63

Query: 140 FQ 141
           + 
Sbjct: 64  YT 65

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A Length = 82

 Score = 67.6 bits (166), Expect = 4e-16
 Identities = 25/61 (40%), Positives = 32/61 (52%), Gaps = 3/61 (4%)

Query: 81  ENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSF 140
           + P +C +G C N  G+YRC C  GY     G  C D +EC +    C  GTCKN  G F
Sbjct: 9   KEPDVCKHGQCINTDGSYRCECPFGYILA--GNECVDTDECSVGN-PCGNGTCKNVIGGF 65

Query: 141 Q 141
           +
Sbjct: 66  E 66

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A Length = 82

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 11/32 (34%), Positives = 16/32 (50%)

Query: 81  ENPGICTNGACENLMGTYRCICNPGYEGDPTG 112
                C NG C+N++G + C C  G+E  P  
Sbjct: 48  SVGNPCGNGTCKNVIGGFECTCEEGFEPGPMM 79

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Length = 162

 Score = 68.2 bits (167), Expect = 2e-15
 Identities = 17/56 (30%), Positives = 22/56 (39%)

Query: 86  CTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSFQ 141
               A         C    G+  +P   +  D +EC     +C GG C NT GSFQ
Sbjct: 90  EMCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQGGKCINTFGSFQ 145

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Length = 162

 Score = 63.5 bits (155), Expect = 1e-13
 Identities = 16/61 (26%), Positives = 22/61 (36%), Gaps = 4/61 (6%)

Query: 81  ENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSF 140
            +P  C +G C N  G+Y C C P +E +PT   C D                +   G  
Sbjct: 7   LDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNC----YLDIRPRGDNGDT 62

Query: 141 Q 141
            
Sbjct: 63  A 63

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Length = 162

 Score = 49.7 bits (119), Expect = 2e-08
 Identities = 13/36 (36%), Positives = 20/36 (55%)

Query: 80  TENPGICTNGACENLMGTYRCICNPGYEGDPTGKLC 115
            E PG+C  G C N  G+++C C  GY  +   ++C
Sbjct: 126 QELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVC 161

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Length = 162

 Score = 48.5 bits (116), Expect = 5e-08
 Identities = 5/56 (8%), Positives = 8/56 (14%), Gaps = 2/56 (3%)

Query: 86  CTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSFQ 141
             +       G   C    G         CS   +               +     
Sbjct: 50  YLDIRPRGDNGDTACSNEIGVGVSKASCCCSL-GKAWGTPCEM-CPAVNTSEYKIL 103

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens} Length = 147

 Score = 62.0 bits (151), Expect = 3e-13
 Identities = 19/66 (28%), Positives = 24/66 (36%), Gaps = 3/66 (4%)

Query: 76  NHHTTENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKN 135
                 + G      C         IC  GY     G  C D +EC +   +C  G C N
Sbjct: 68  KSQCCSSLGAAWGSPCTL--CQVDPICGKGYSRI-KGTQCEDIDECEVFPGVCKNGLCVN 124

Query: 136 TPGSFQ 141
           T GSF+
Sbjct: 125 TRGSFK 130

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens} Length = 147

 Score = 55.4 bits (134), Expect = 1e-10
 Identities = 15/58 (25%), Positives = 23/58 (39%), Gaps = 10/58 (17%)

Query: 84  GICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSFQ 141
             C NG C+N  G++ C C+     DPT  +C +  +           TC  T    +
Sbjct: 10  SPCINGVCKNSPGSFICECSSESTLDPTKTICIETIKG----------TCWQTVIDGR 57

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens} Length = 147

 Score = 51.2 bits (123), Expect = 3e-09
 Identities = 15/36 (41%), Positives = 21/36 (58%)

Query: 80  TENPGICTNGACENLMGTYRCICNPGYEGDPTGKLC 115
              PG+C NG C N  G+++C C  G   D TG++C
Sbjct: 111 EVFPGVCKNGLCVNTRGSFKCQCPSGMTLDATGRIC 146

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A Length = 143

 Score = 57.1 bits (138), Expect = 2e-11
 Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 10/73 (13%)

Query: 79  TTENPGIC-TNGACENLMGTYRCICNPGYE--------GDPTGKLCSDQNECLMDVMIC- 128
            T +   C     C N  G+Y C+C+PGYE         + +   C D +EC      C 
Sbjct: 48  ATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQDVDECSSGQHQCD 107

Query: 129 SGGTCKNTPGSFQ 141
           S   C NT GS+ 
Sbjct: 108 SSTVCFNTVGSYS 120

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A Length = 143

 Score = 50.6 bits (121), Expect = 7e-09
 Identities = 10/43 (23%), Positives = 17/43 (39%), Gaps = 1/43 (2%)

Query: 80  TENPGIC-TNGACENLMGTYRCICNPGYEGDPTGKLCSDQNEC 121
           +     C ++  C N +G+Y C C PG++             C
Sbjct: 100 SSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNNQKDTVC 142

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A Length = 143

 Score = 49.0 bits (117), Expect = 2e-08
 Identities = 17/60 (28%), Positives = 23/60 (38%), Gaps = 10/60 (16%)

Query: 88  NGACENLMGTYRCICNPGYEGD-----PTGKLCSDQNECLMDVMIC--SGGTCKNTPGSF 140
           + +C N      C CNPG+           + C D NEC     +       C NT GS+
Sbjct: 12  DSSCVN---ATACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTEGSY 68

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A Length = 107

 Score = 52.3 bits (126), Expect = 6e-10
 Identities = 9/54 (16%), Positives = 15/54 (27%), Gaps = 5/54 (9%)

Query: 88  NGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSFQ 141
           +    + M  Y                    NECL +   CS   C +    ++
Sbjct: 3   HHHHHHPMSDYDIPTTENLYFQG----AMGTNECLDNNGGCS-YVCNDLKIGYE 51

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A Length = 107

 Score = 52.3 bits (126), Expect = 7e-10
 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 4/61 (6%)

Query: 81  ENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSF 140
           +N G C +  C +L   Y C+C  G++     + C D +EC      CS   C N  G +
Sbjct: 34  DNNGGC-SYVCNDLKIGYECLCPDGFQLVAQRR-CEDIDECQDP-DTCS-QLCVNLEGGY 89

Query: 141 Q 141
           +
Sbjct: 90  K 90

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A Length = 107

 Score = 37.7 bits (88), Expect = 2e-04
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 81  ENPGICTNGACENLMGTYRCICNPGYEGDPTGKLC 115
           ++P  C +  C NL G Y+C C  G++ DP  K C
Sbjct: 73  QDPDTC-SQLCVNLEGGYKCQCEEGFQLDPHTKAC 106

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A Length = 118

 Score = 50.4 bits (121), Expect = 5e-09
 Identities = 22/72 (30%), Positives = 28/72 (38%), Gaps = 6/72 (8%)

Query: 73  HGANHHTTENPGICTNGACE---NLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICS 129
               H        C   AC    +      C C  GY  D  G +C+D +EC      CS
Sbjct: 33  APIPHEPHRCQMFCNQTACPADCDPNTQASCECPEGYILDD-GFICTDIDECENGG-FCS 90

Query: 130 GGTCKNTPGSFQ 141
            G C N PG+F+
Sbjct: 91  -GVCHNLPGTFE 101

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A Length = 118

 Score = 39.7 bits (93), Expect = 4e-05
 Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 81  ENPGICTNGACENLMGTYRCICNPGYEGDP-TGKLC 115
           EN G C +G C NL GT+ CIC P        G  C
Sbjct: 84  ENGGFC-SGVCHNLPGTFECICGPDSALAGQIGTDC 118

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L* Length = 114

 Score = 50.1 bits (120), Expect = 5e-09
 Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 2/56 (3%)

Query: 86  CTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSFQ 141
           C +G C + +G++ C C  G+EG    +       C +D   C    C    G  +
Sbjct: 23  CGHGTCIDGIGSFSCDCRSGWEGR-FCQREVSFLNCSLDNGGC-THYCLEEVGWRR 76

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L* Length = 114

 Score = 39.3 bits (92), Expect = 6e-05
 Identities = 11/40 (27%), Positives = 15/40 (37%), Gaps = 1/40 (2%)

Query: 82  NPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNEC 121
           + G C    C   +G  RC C PGY+       C    + 
Sbjct: 60  DNGGC-THYCLEEVGWRRCSCAPGYKLGDDLLQCHPAVKF 98

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A* Length = 634

 Score = 50.8 bits (121), Expect = 2e-08
 Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 9/63 (14%)

Query: 86  CTNGA-CENLM-GTYRCI-CNPGYEGDPTGKLCSDQNECLMDVMIC----SGGTCKNTPG 138
           C  GA C +   G++ C  C  G+ G+  G  C D +EC +   IC        C NT  
Sbjct: 11  CFPGAQCSSFPDGSWSCGFCPVGFLGN--GTHCEDLDECALVPDICFSTSKVPRCVNTQP 68

Query: 139 SFQ 141
            F 
Sbjct: 69  GFH 71

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A* Length = 634

 Score = 44.2 bits (104), Expect = 4e-06
 Identities = 15/87 (17%), Positives = 25/87 (28%), Gaps = 17/87 (19%)

Query: 80  TENPGICTNGA----CENLMGTYRCI-CNPGYEGDP-----------TGKLCSDQNECLM 123
              P IC + +    C N    + C+ C P Y G+              ++C  +N C  
Sbjct: 48  ALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKD 107

Query: 124 DVMICS-GGTCKNTPGSFQSNFQDSSP 149
               C     C          ++    
Sbjct: 108 KTHNCHKHAECIYLGHFSDPMYKCECQ 134

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A* Length = 135

 Score = 47.2 bits (113), Expect = 8e-08
 Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 9/59 (15%)

Query: 86  CTNGA-CENLMGTYRCICNPGYEGDPTGKLC-SDQNECLMDVMICS-GGTCKNTPGSFQ 141
           C +   C N +G++ C C  GY    TG  C  D NEC+ +   C    TC +  G FQ
Sbjct: 15  CEHAGKCINTLGSFECQCLQGY----TGPRCEIDVNECVSNP--CQNDATCLDQIGEFQ 67

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A* Length = 135

 Score = 44.1 bits (105), Expect = 1e-06
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 9/59 (15%)

Query: 86  CTNGA-CENLMGTYRCICNPGYEGDPTGKLCS-DQNECLMDVMICS-GGTCKNTPGSFQ 141
           C N A C + +G ++CIC PGY     G  C  + +EC      C   G C +    FQ
Sbjct: 53  CQNDATCLDQIGEFQCICMPGY----EGVHCEVNTDECASSP--CLHNGRCLDKINEFQ 105

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A* Length = 135

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 11/48 (22%), Positives = 19/48 (39%), Gaps = 6/48 (12%)

Query: 86  CTNGA-CENLMGTYRCICNPGYEGDPTGKLCS-DQNECLMDVMICSGG 131
           C +   C + +  ++C C  G+    TG LC  D +  L    +    
Sbjct: 91  CLHNGRCLDKINEFQCECPTGF----TGHLCQVDLHHILDAQKMVWNH 134

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L* Length = 146

 Score = 46.2 bits (110), Expect = 3e-07
 Identities = 13/57 (22%), Positives = 19/57 (33%), Gaps = 5/57 (8%)

Query: 86  CTNGA-CENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSFQ 141
           C NG  C++ + +Y C C  G+     GK C     C +    C             
Sbjct: 56  CLNGGLCKDDINSYECWCQVGF----EGKNCELDATCNIKNGRCKQFCKTGADSKVL 108

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ... Length = 134

 Score = 44.2 bits (105), Expect = 1e-06
 Identities = 13/58 (22%), Positives = 18/58 (31%), Gaps = 6/58 (10%)

Query: 86  CTNGA-CENLMGTYRCICNPGYEGDPTGKLCS-DQNECLMDVMICSGGTCKNTPGSFQ 141
           C N   C++ +G Y C C  G+     GK C     +            C     S  
Sbjct: 50  CQNQGKCKDGLGEYTCTCLEGF----EGKNCELFTRKLCSLDNGDCDQFCHEEQNSVV 103

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L* Length = 195

 Score = 44.7 bits (106), Expect = 2e-06
 Identities = 13/58 (22%), Positives = 18/58 (31%), Gaps = 6/58 (10%)

Query: 86  CTNGA-CENLMGTYRCICNPGYEGDPTGKLCS-DQNECLMDVMICSGGTCKNTPGSFQ 141
           C N   C++ +G Y C C  G+     GK C     +            C     S  
Sbjct: 50  CQNQGKCKDGLGEYTCTCLEGF----EGKNCELFTRKLCSLDNGDCDQFCHEEQNSVV 103

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L* Length = 195

 Score = 37.8 bits (88), Expect = 5e-04
 Identities = 12/61 (19%), Positives = 16/61 (26%), Gaps = 7/61 (11%)

Query: 82  NPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICS-GGTCKNTPGSF 140
           + G C +  C     +  C C  GY     GK C            C      +      
Sbjct: 87  DNGDC-DQFCHEEQNSVVCSCARGYTLADNGKAC---IPTGPYP--CGKQTLERRKRSVA 140

Query: 141 Q 141
           Q
Sbjct: 141 Q 141

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} Length = 386

 Score = 45.1 bits (106), Expect = 2e-06
 Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 3/60 (5%)

Query: 82  NPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSFQ 141
           N G C    C+ + G  +C C+ GY     G+ C D NEC  +   CS G C N+ G+FQ
Sbjct: 9   NNGGCAQK-CQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEG-YCSQG-CTNSEGAFQ 65

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A Length = 186

 Score = 43.9 bits (102), Expect = 3e-06
 Identities = 13/64 (20%), Positives = 20/64 (31%), Gaps = 9/64 (14%)

Query: 85  ICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVM--------ICSGGTCKNT 136
           IC NG    +   + C+CN G         C + NEC  + +         C        
Sbjct: 12  ICXNGQLVQMSNHFXCMCNEGLVHLS-ENTCEEXNECXXETLGXACGEFGQCIENPDPAQ 70

Query: 137 PGSF 140
              +
Sbjct: 71  VNMY 74

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A Length = 186

 Score = 42.7 bits (99), Expect = 8e-06
 Identities = 8/61 (13%), Positives = 11/61 (18%)

Query: 81  ENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSF 140
              G C        +  Y C C  GY       +                    +   S 
Sbjct: 57  GEFGQCIENPDPAQVNMYXCGCIEGYTLXEDTCVLDVCQYXNCGESGECIVEYLSEIQSA 116

Query: 141 Q 141
            
Sbjct: 117 G 117

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A Length = 186

 Score = 42.7 bits (99), Expect = 1e-05
 Identities = 10/35 (28%), Positives = 14/35 (40%)

Query: 87  TNGACENLMGTYRCICNPGYEGDPTGKLCSDQNEC 121
            N  C N+ G Y C C  G+  D    +C   +  
Sbjct: 149 DNEVCXNVEGVYXCQCMEGFTFDXEXNVCLGPHHH 183

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L Length = 400

 Score = 44.1 bits (103), Expect = 5e-06
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 4/62 (6%)

Query: 80  TENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGS 139
            +N G C++  C +L   Y C+C  G++     + C D +EC  D   CS   C N  G 
Sbjct: 4   LDNNGGCSHV-CNDLKIGYECLCPDGFQLVA-QRRCEDIDECQ-DPDTCS-QLCVNLEGG 59

Query: 140 FQ 141
           ++
Sbjct: 60  YK 61

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L Length = 400

 Score = 43.7 bits (102), Expect = 7e-06
 Identities = 16/66 (24%), Positives = 23/66 (34%), Gaps = 1/66 (1%)

Query: 81  ENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSF 140
           ++P  C+   C NL G Y+C C  G++ DP  K C                  K T    
Sbjct: 44  QDPDTCS-QLCVNLEGGYKCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTLDRS 102

Query: 141 QSNFQD 146
           +     
Sbjct: 103 EYTSLI 108

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B Length = 318

 Score = 42.4 bits (99), Expect = 2e-05
 Identities = 17/75 (22%), Positives = 23/75 (30%), Gaps = 6/75 (8%)

Query: 53  SQDLERLKFGLEPPTSRSEVHGANHHTTENPGICTNGACENL------MGTYRCICNPGY 106
            + L  +   +  P               NP    NG C +L         Y+C C  G 
Sbjct: 239 GEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGV 298

Query: 107 EGDPTGKLCSDQNEC 121
           +    GK C D N  
Sbjct: 299 KLLENGKTCKDGNSH 313

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} Length = 349

 Score = 42.2 bits (98), Expect = 2e-05
 Identities = 14/61 (22%), Positives = 22/61 (36%), Gaps = 1/61 (1%)

Query: 81  ENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSF 140
              G C+ G C N  G ++C C  GYE  P  + C       + +        +  P   
Sbjct: 5   AEEGYCSQG-CTNSEGAFQCWCEAGYELRPDRRSCKALGPEPVLLFANRIDIRQVLPHRS 63

Query: 141 Q 141
           +
Sbjct: 64  E 64

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ... Length = 142

 Score = 38.8 bits (91), Expect = 1e-04
 Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 12/61 (19%)

Query: 86  CTNGA-CENLMGTYRCICNPGYEGDPTGKLC-SDQNECLMDVMICS-GGT---CKNTPGS 139
           C NG  C++ + +Y C C P +     G+ C + +++ L+   +   GG    C +  G+
Sbjct: 55  CQNGGSCKDQLQSYICFCLPAF----EGRNCETHKDDQLIC--VNENGGCEQYCSDHTGT 108

Query: 140 F 140
            
Sbjct: 109 K 109

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens} Length = 317

 Score = 38.9 bits (91), Expect = 2e-04
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 5/57 (8%)

Query: 86  CTNGACENLMGTYRCICNPGYEGDPTGKLCS-DQNECLMDVMICSGGTCKNTPGSFQ 141
             NG+C++ +  Y C C+PGYE    G  C   +NEC  +        C     S+ 
Sbjct: 14  LHNGSCQDSIWGYTCTCSPGYE----GSNCELAKNECHPERTDGCQHFCLPGQESYT 66

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ... Length = 55

 Score = 35.4 bits (82), Expect = 5e-04
 Identities = 8/31 (25%), Positives = 9/31 (29%)

Query: 91  CENLMGTYRCICNPGYEGDPTGKLCSDQNEC 121
           C     +  C C  GY     GK C      
Sbjct: 15  CHEEQNSVVCSCARGYTLADNGKACIPTGPY 45

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1 Length = 170

 Score = 37.2 bits (86), Expect = 6e-04
 Identities = 10/41 (24%), Positives = 16/41 (39%)

Query: 79  TTENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQN 119
                    +  C N +G + C C  GY      + CS+Q+
Sbjct: 129 VAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSEQS 169

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A Length = 39

 Score = 34.8 bits (81), Expect = 6e-04
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 3/29 (10%)

Query: 82  NPGICTNGA-CENLMGTYRCICNPGYEGD 109
           NP  C NG  C++ + +Y C C  G+EG 
Sbjct: 9   NP--CLNGGSCKDDINSYECWCPFGFEGK 35

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens} Length = 143

 Score = 36.6 bits (85), Expect = 8e-04
 Identities = 10/38 (26%), Positives = 14/38 (36%), Gaps = 6/38 (15%)

Query: 86  CTNGA-CENLMGTYRCICNPGYEGDPTGKLCS-DQNEC 121
           C NG  C +L+  Y C C   +     G+ C       
Sbjct: 105 CKNGGICTDLVANYSCECPGEF----MGRNCQYKGGGH 138

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens} Length = 143

 Score = 36.6 bits (85), Expect = 8e-04
 Identities = 16/65 (24%), Positives = 24/65 (36%), Gaps = 10/65 (15%)

Query: 81  ENPGICTN--GACENLMGTYRCICNPGYEGDPTGKLCS-DQNECLMDVMICS-GGTCKNT 136
            N G C        +    Y C C  G+     G  C  + NEC ++   C  GG C + 
Sbjct: 61  HNGGTCEISEAYRGDTFIGYVCKCPRGF----NGIHCQHNINECEVE--PCKNGGICTDL 114

Query: 137 PGSFQ 141
             ++ 
Sbjct: 115 VANYS 119

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	153
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	99.72
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	99.71
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	99.67
2bou_A	143	EGF-like module containing mucin-like hormone rece	99.6
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	99.6
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	99.57
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	99.52
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	99.51
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	99.51
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	99.48
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	99.47
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	99.43
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	99.42
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	99.41
1aut_L	114	Activated protein C; serine proteinase, plasma cal	99.32
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	99.3
3v65_B	386	Low-density lipoprotein receptor-related protein;	99.29
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	99.28
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	99.26
2vh0_B	134	Activated factor XA light chain; serine protease,	99.26
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	99.21
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	99.19
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	99.18
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	99.17
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	99.17
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	99.16
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	99.16
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	99.15
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	99.09
2bou_A	143	EGF-like module containing mucin-like hormone rece	99.08
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	99.05
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	98.96
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	98.96
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	98.87
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	98.86
2vh0_B	134	Activated factor XA light chain; serine protease,	98.85
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	98.84
1aut_L	114	Activated protein C; serine proteinase, plasma cal	98.83
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	98.8
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	98.78
1kli_L	69	Factor VIIA; extrinsic coagulation pathway, serine	98.76
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	98.62
1kig_L	51	Factor XA; glycoprotein, serine protease, plasma,	98.54
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	98.53
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.49
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	98.47
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	98.45
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	98.44
2bz6_L	53	Blood coagulation factor VIIA; serine protease, en	98.44
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.34
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	98.34
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	98.28
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	98.26
2wph_E	59	Coagulation factor IXA light chain; serine proteas	98.26
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	98.22
2kl7_A	71	Fibulin-4; secreted, calcium, disease mutation, di	98.16
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	98.12
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	98.09
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	98.07
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	98.06
2kl7_A	71	Fibulin-4; secreted, calcium, disease mutation, di	98.06
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	98.04
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	97.97
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	97.9
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	97.89
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	97.87
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	97.87
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	97.84
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	97.8
1n1i_A	105	Merozoite surface protein-1; MSP1, malaria, surfac	97.79
1kli_L	69	Factor VIIA; extrinsic coagulation pathway, serine	97.77
1ob1_C	99	Major merozoite surface protein; immune system, im	97.64
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	97.64
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	97.63
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	97.59
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	97.57
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	97.56
1szb_A	170	Mannose binding lectin-associated serine protease-	97.54
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	97.53
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	97.5
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	97.43
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	97.38
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	97.37
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	97.34
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	97.28
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	97.26
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	97.26
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	97.21
1kig_L	51	Factor XA; glycoprotein, serine protease, plasma,	97.13
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	96.86
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	96.81
1nzi_A	159	Complement C1S component; calcium, innate immunity	96.79
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	96.76
2wph_E	59	Coagulation factor IXA light chain; serine proteas	96.75
2bz6_L	53	Blood coagulation factor VIIA; serine protease, en	96.67
1szb_A	170	Mannose binding lectin-associated serine protease-	96.61
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	96.38
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	96.27
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	96.06
1nzi_A	159	Complement C1S component; calcium, innate immunity	95.73
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	95.29
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	95.23
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	95.22
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	95.18
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	95.15
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	95.09
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	94.9
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	94.78
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	94.56
3e50_C	50	Protransforming growth factor alpha; IDE, TGF-alph	94.05
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	93.95
3e50_C	50	Protransforming growth factor alpha; IDE, TGF-alph	93.76
1xdt_R	79	Hbegf, heparin-binding epidermal growth factor; co	93.75
2rnl_A	50	Amphiregulin; AR, colorectum cell-derived growth f	93.73
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	93.66
1xdt_R	79	Hbegf, heparin-binding epidermal growth factor; co	93.64
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	93.39
2rnl_A	50	Amphiregulin; AR, colorectum cell-derived growth f	93.27
2fd6_A	122	Urokinase-type plasminogen activator; UPAR, ATF, A	93.11
1iox_A	50	Betacellulin; EGF-like fold, hormone/growth factor	93.11
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	92.72
1iox_A	50	Betacellulin; EGF-like fold, hormone/growth factor	92.67
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	92.26
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	91.8
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	90.66
1b9w_A	95	Protein (merozoite surface protein 1); MSP-1, cand	90.2
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	90.07
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	89.77
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	89.51
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	88.76
1g1t_A	157	E-selectin; EGF, adhesion molecule, SLEX, immune s	88.16
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	87.89
1g1t_A	157	E-selectin; EGF, adhesion molecule, SLEX, immune s	87.48
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	87.22
3asi_A	410	Neurexin-1-alpha; beta-sandwich, cell adhesion, sy	86.68
1n1i_A	105	Merozoite surface protein-1; MSP1, malaria, surfac	86.48
1ob1_C	99	Major merozoite surface protein; immune system, im	85.93
3asi_A	410	Neurexin-1-alpha; beta-sandwich, cell adhesion, sy	85.09
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	81.84
3fby_A	551	COMP, cartilage oligomeric matrix protein; signatu	81.55
2i9a_A	145	Urokinase-type plasminogen activator; growth facto	80.31

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=99.72  E-value=1.1e-17  Score=101.61  Aligned_cols=76  Identities=34%  Similarity=0.678  Sum_probs=67.4

Q ss_pred             cCCcccCCCCCCCCCCCCceeecCCCceeeCCCCcccCCCCCCCccCccccCCCCCCCCCeeeecCCCcEEecCCCCCcc
Q psy7854          72 VHGANHHTTENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSFQSNFQDSSPIL  151 (153)
Q Consensus        72 ~C~~~~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~g~~C~~i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~  151 (153)
                      +|+++|+|.. +.+|.++.|++..++|.|.|++||.+  .+..|++++||.. .++|.+++|+++.|+|+|.|++||.+.
T Consensus         1 sC~dideC~~-~~~C~~g~C~n~~g~y~C~C~~Gy~~--~g~~C~dideC~~-~~~C~~~~C~n~~g~y~C~C~~G~~g~   76 (82)
T 1emn_A            1 SAVDMDECKE-PDVCKHGQCINTDGSYRCECPFGYIL--AGNECVDTDECSV-GNPCGNGTCKNVIGGFECTCEEGFEPG   76 (82)
T ss_dssp             CCCCCCSSSS-TTSCSSSEECCCSSCCCEECCTTEEE--ETTEEEECCGGGT-CCTTSSSCEEECSSSEEECCSSSSCCC
T ss_pred             CCCccccCCC-CCCcCCCEEEecCCCEEEECCCCeEC--CCCccCCcccccC-CCCCCCCEeECCCCCEEeECCCCeEeC
Confidence            4788999986 57898789999999999999999976  5789999999963 678977899999999999999999764

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=99.71  E-value=1.2e-17  Score=102.40  Aligned_cols=78  Identities=32%  Similarity=0.727  Sum_probs=67.2

Q ss_pred             CcccCCCCCCCCCCCCceeecCCCceeeCCCCcccCC-CCCCCccCccccCCCCCCCCCeeeecCCCcEEecCCCCCcc
Q psy7854          74 GANHHTTENPGICTNGACENLMGTYRCICNPGYEGDP-TGKLCSDQNECLMDVMICSGGTCKNTPGSFQSNFQDSSPIL  151 (153)
Q Consensus        74 ~~~~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~-~g~~C~~i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~  151 (153)
                      +|+|||...+++|.++.|++..++|+|.|++||.+.. .+..|++||||...+..|.++.|+++.|+|+|.|++||.+.
T Consensus         1 ~dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~   79 (86)
T 1lmj_A            1 TDIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLS   79 (86)
T ss_dssp             CCCCTTTTCSSTTTTSCEEEETTEEEECCCSSEEECTTTSSSEEECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCCC
T ss_pred             CccccccCCCCCCCCCEEECCCCCEEeeCCCCcCccCCCCCccCCcccccCCCCcCCCCEeEcCCCCEEEECcCCcccC
Confidence            3689999866779777999999999999999998653 37899999999766667866899999999999999999764

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=99.67  E-value=1.7e-16  Score=104.99  Aligned_cols=111  Identities=19%  Similarity=0.368  Sum_probs=82.2

Q ss_pred             CCcccCcCCCCCCCeeeCCCceecccCCCCccCCCCCCCCcCC-cccCCCCCCCCCC-CCceeecCCCceeeCCCCcccC
Q psy7854          32 RSISIDEFTVHSSTLIALSQESQDLERLKFGLEPPTSRSEVHG-ANHHTTENPGICT-NGACENLMGTYRCICNPGYEGD  109 (153)
Q Consensus        32 ~c~~i~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~-~~~~C~~~~~~C~-~~~C~~~~g~~~C~C~~g~~~~  109 (153)
                      ++.||+||......|.+++.|.+...+ ....++++|.+..|+ ++++|..  .+|. ++.|++..++|.|.|++||   
T Consensus         1 Sc~dideC~~~~~~C~~~g~C~~~~g~-~~C~C~~Gy~G~~C~~~~~~C~~--~~C~~~~~C~~~~g~~~C~C~~G~---   74 (135)
T 2vj3_A            1 SAQDVDECSLGANPCEHAGKCINTLGS-FECQCLQGYTGPRCEIDVNECVS--NPCQNDATCLDQIGEFQCICMPGY---   74 (135)
T ss_dssp             --CCCCTTTSSSCSSSTTCEEEECSSS-EEEECCTTEESTTSCEECCTTTT--CCCCSSCEEEECSSCEEEECCTTE---
T ss_pred             CCcccccccCCCCCCCCCCEeECCCCC-EEEECCCCCcCCcccccCccCCC--CCCCCCCEEeCCCCCceeeCCCCC---
Confidence            367899997543334344555433221 223355556677885 8999987  7896 4699999999999999999   


Q ss_pred             CCCCCCc-cCccccCCCCCCCC-CeeeecCCCcEEecCCCCCcc
Q psy7854         110 PTGKLCS-DQNECLMDVMICSG-GTCKNTPGSFQSNFQDSSPIL  151 (153)
Q Consensus       110 ~~g~~C~-~i~~C~~~~~~C~~-~~C~~~~g~~~C~C~~g~~~~  151 (153)
                       .|..|+ ++++|  ...+|.+ ++|+++.++|+|.|++||.+.
T Consensus        75 -~G~~C~~~~~~C--~~~~C~~~g~C~~~~g~~~C~C~~G~~G~  115 (135)
T 2vj3_A           75 -EGVHCEVNTDEC--ASSPCLHNGRCLDKINEFQCECPTGFTGH  115 (135)
T ss_dssp             -ESSSSCEECCTT--TTCCSTTTCEEEECSSCEEEECCTTEESS
T ss_pred             -cCCcceecCCcc--cCCCcCCCCEeECCCCCeEEECCCCCcCC
Confidence             567896 89999  5678986 999999999999999999753

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=99.60  E-value=6.5e-16  Score=103.09  Aligned_cols=97  Identities=25%  Similarity=0.435  Sum_probs=76.5

Q ss_pred             cccCCCCccCCCC----CCCCcCCcccCCCCCC-CCCC-CCceeecCCCceeeCCCCcccCCC--------CCCCccCcc
Q psy7854          55 DLERLKFGLEPPT----SRSEVHGANHHTTENP-GICT-NGACENLMGTYRCICNPGYEGDPT--------GKLCSDQNE  120 (153)
Q Consensus        55 ~~~~~~~~~~~~~----~~~~~C~~~~~C~~~~-~~C~-~~~C~~~~g~~~C~C~~g~~~~~~--------g~~C~~i~~  120 (153)
                      +.|.|..||....    ..+..|+++|+|.... .+|. ++.|++..++|.|.|++||.+...        +..|++|+|
T Consensus        19 ~~C~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~~~~~~~~~C~dide   98 (143)
T 2bou_A           19 TACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQDVDE   98 (143)
T ss_dssp             SCEEECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCCSCBSSGGGCCEEECCH
T ss_pred             CEEeCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCccccccCCCCCcCCccC
Confidence            4566666765532    1246899999998742 3896 569999999999999999987532        458999999


Q ss_pred             ccCCCCCCCC-CeeeecCCCcEEecCCCCCcc
Q psy7854         121 CLMDVMICSG-GTCKNTPGSFQSNFQDSSPIL  151 (153)
Q Consensus       121 C~~~~~~C~~-~~C~~~~g~~~C~C~~g~~~~  151 (153)
                      |....++|.+ ++|+++.|+|+|.|++||.+.
T Consensus        99 C~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~  130 (143)
T 2bou_A           99 CSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPR  130 (143)
T ss_dssp             HHHTCCCCCTTSEEEECSSCEEEECCSSSCBC
T ss_pred             ccCcCCCCCCCCEEECCCCCEEeeCCCCcccC
Confidence            9766789986 999999999999999999864

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=99.60  E-value=3.1e-15  Score=120.08  Aligned_cols=111  Identities=18%  Similarity=0.292  Sum_probs=81.4

Q ss_pred             ccCcCCCCCCCeeeCCCcee-----ccc-CCCCccCCCCCCCCcCCcccCCCCCCCCCC-CC---ceeecCCCceee-CC
Q psy7854          35 SIDEFTVHSSTLIALSQESQ-----DLE-RLKFGLEPPTSRSEVHGANHHTTENPGICT-NG---ACENLMGTYRCI-CN  103 (153)
Q Consensus        35 ~i~~c~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~~~C~~~~~C~~~~~~C~-~~---~C~~~~g~~~C~-C~  103 (153)
                      +|++|..+.  |.+.+.|.+     +.| .|..||...   +..|++++||...++.|. ++   .|++..++|+|. |+
T Consensus         2 DIDeC~~nP--C~~gg~C~n~~~Gsy~C~~C~~GytGd---g~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~   76 (634)
T 1yo8_A            2 DPDGCLSNP--CFPGAQCSSFPDGSWSCGFCPVGFLGN---GTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCP   76 (634)
T ss_dssp             --CGGGGCC--SCTTCCEEECTTSCEEECCCCTTBCSC---SSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCC
T ss_pred             cccccCCCC--CCCCCEEecCCCCCeECCcCCCccCCC---CCCccccccccCCCCcccCCccccceeeccCceecccCC
Confidence            567775432  333344433     344 455555422   368999999998666696 45   799999999998 99


Q ss_pred             CCcccCC-----------CCCCCccCccccCCCCCCCC-CeeeecC----CCcEEecCCCCCc
Q psy7854         104 PGYEGDP-----------TGKLCSDQNECLMDVMICSG-GTCKNTP----GSFQSNFQDSSPI  150 (153)
Q Consensus       104 ~g~~~~~-----------~g~~C~~i~~C~~~~~~C~~-~~C~~~~----g~~~C~C~~g~~~  150 (153)
                      +||.+..           .+..|++++||....++|.+ +.|+++.    ++|+|.|++||.+
T Consensus        77 ~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~G  139 (634)
T 1yo8_A           77 PRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAG  139 (634)
T ss_dssp             TTEEECCCEESSSHHHHSCCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEE
T ss_pred             CCcccCccccccccccccCCCcccccccccCCCcccccCccccccccccccceeeeccCCccc
Confidence            9998753           24569999999866789985 8999998    9999999999975

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=99.57  E-value=9.3e-16  Score=94.06  Aligned_cols=73  Identities=27%  Similarity=0.667  Sum_probs=62.5

Q ss_pred             CcccCCCCCCCCCCCCceeecCCCceeeCCCCcccCCCCCCCccCccccCCCCCCCCCeeeecCCCcEEecC--CCCC
Q psy7854          74 GANHHTTENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSFQSNFQ--DSSP  149 (153)
Q Consensus        74 ~~~~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~g~~C~~i~~C~~~~~~C~~~~C~~~~g~~~C~C~--~g~~  149 (153)
                      +++|+|...+.+|.++.|.+..++|+|.|++||.+.+.+..|++|+||.  .++|. +.|++++|+|+|.|+  +||.
T Consensus         1 ~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~dideC~--~~~C~-~~C~n~~g~y~C~C~g~~G~~   75 (87)
T 1z6c_A            1 KDVDECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECS--ENMCA-QLCVNYPGGYTCYCDGKKGFK   75 (87)
T ss_dssp             CCSCSSSSSSSSBTTSSCCCBTTBCCCSSSTTCEEETTTTEEECCCHHH--HSCCS-SEECCCSSSCCEECCSSSCCB
T ss_pred             CccccccCCCCCCCCCEeECCCCCEEEECCCCceECCCCCcCCCcCeeC--CCCCC-CEEEccCCCEEEECCCCcCCc
Confidence            3689998865558556999999999999999998877789999999994  57898 899999999999995  6664

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=99.52  E-value=3.4e-14  Score=94.60  Aligned_cols=69  Identities=26%  Similarity=0.601  Sum_probs=58.4

Q ss_pred             cccCCCCCCCCCC-CCcee-------ecCCCceeeCCCCcccCCCCCCCc-cCccccCCCCCCCC-CeeeecCCCcEEec
Q psy7854          75 ANHHTTENPGICT-NGACE-------NLMGTYRCICNPGYEGDPTGKLCS-DQNECLMDVMICSG-GTCKNTPGSFQSNF  144 (153)
Q Consensus        75 ~~~~C~~~~~~C~-~~~C~-------~~~g~~~C~C~~g~~~~~~g~~C~-~i~~C~~~~~~C~~-~~C~~~~g~~~C~C  144 (153)
                      ++++|..  .+|. ++.|+       +..++|.|.|++||    .|..|+ ++++|  ..++|.+ ++|+++.++|+|.|
T Consensus        51 ~~~~C~~--~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~----~G~~C~~~i~~C--~~~~C~~~~~C~~~~g~~~C~C  122 (143)
T 4d90_A           51 SAGPCTP--NPCHNGGTCEISEAYRGDTFIGYVCKCPRGF----NGIHCQHNINEC--EVEPCKNGGICTDLVANYSCEC  122 (143)
T ss_dssp             CCCTTSS--CCCCTTCEEEECCCEETTEECCEEEECCTTE----ESTTSCEECCTT--TTCCSCTTCEEEEETTEEEEEC
T ss_pred             cCCcCCC--CCCCCCCEecCCCccccCCCCCeEeECcCCC----cCCCcccCCCcC--CCCCCCCCCEeECCCCCeEeEC
Confidence            4567765  6785 46898       67789999999999    678997 99999  5778986 99999999999999


Q ss_pred             CCCCCcc
Q psy7854         145 QDSSPIL  151 (153)
Q Consensus       145 ~~g~~~~  151 (153)
                      ++||.+.
T Consensus       123 ~~G~~G~  129 (143)
T 4d90_A          123 PGEFMGR  129 (143)
T ss_dssp             CTTCBST
T ss_pred             CCCCccC
Confidence            9999764

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=99.51  E-value=2.8e-15  Score=95.32  Aligned_cols=83  Identities=23%  Similarity=0.513  Sum_probs=39.5

Q ss_pred             CCCCCCCCcCCcccCCCCCCCCCCCCceeecCCCceeeCCCCcccCCCCCCCccCccccCCCCCCCCCeeeecCCCcEEe
Q psy7854          64 EPPTSRSEVHGANHHTTENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSFQSN  143 (153)
Q Consensus        64 ~~~~~~~~~C~~~~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~g~~C~~i~~C~~~~~~C~~~~C~~~~g~~~C~  143 (153)
                      ...++.+..| ++|+|......|.+ .|.+..++|.|.|++||.+. ++..|++||||. ..++|. +.|+++.|+|.|.
T Consensus        18 ~~~~~~~~~C-d~neC~~~~~~C~~-~C~n~~g~y~C~C~~Gy~g~-~g~~C~dideC~-~~~~C~-~~C~n~~gsy~C~   92 (107)
T 2w2n_E           18 TENLYFQGAM-GTNECLDNNGGCSY-VCNDLKIGYECLCPDGFQLV-AQRRCEDIDECQ-DPDTCS-QLCVNLEGGYKCQ   92 (107)
T ss_dssp             --CCCCSCCB-SCCGGGTGGGGCSS-EEECCSBSCEEECCTTCEEE-TTTEEEC--------------------------
T ss_pred             cCCCcCCCCC-cCccCcCCCCCCCC-EeEeCCCCeEEECCCCcccc-CCCccccccccC-CCCCcC-CeeecCCCCEEEE
Confidence            3445556678 68999865567864 89999999999999999774 467899999996 357897 8999999999999


Q ss_pred             cCCCCCcc
Q psy7854         144 FQDSSPIL  151 (153)
Q Consensus       144 C~~g~~~~  151 (153)
                      |++||.+.
T Consensus        93 C~~Gy~~~  100 (107)
T 2w2n_E           93 CEEGFQLD  100 (107)
T ss_dssp             --------
T ss_pred             CCCCceEC
Confidence            99999753

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=99.51  E-value=1.5e-15  Score=103.33  Aligned_cols=114  Identities=21%  Similarity=0.276  Sum_probs=71.8

Q ss_pred             ccCcCCCCCCCeeeCCCcee----cccCCCCccCCCCCCCCcCCcccC--CCCCCCCCC---CCceeecCC----Cceee
Q psy7854          35 SIDEFTVHSSTLIALSQESQ----DLERLKFGLEPPTSRSEVHGANHH--TTENPGICT---NGACENLMG----TYRCI  101 (153)
Q Consensus        35 ~i~~c~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~C~~~~~--C~~~~~~C~---~~~C~~~~g----~~~C~  101 (153)
                      ||+||.... .| .++.|.+    +.|.|..||.+.. .+..|+++++  |.....+|.   ++.|.+..+    +|.|.
T Consensus         2 dideC~~~~-~C-~~~~C~n~~gsy~C~C~~Gy~~~~-~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~   78 (162)
T 1uzk_A            2 DVNECLDPT-TC-ISGNCVNTPGSYICDCPPDFELNP-TRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCC   78 (162)
T ss_dssp             CCCGGGSTT-SS-BTSEEEEETTEEEEECCTTCEECT-TSSBEECCCCEEEEEEC----------CEEEEEEEECHHHHH
T ss_pred             ccccCCCCC-CC-CCCEeECCCCCEEEeCCCCCeECC-CCCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCceee
Confidence            677776321 12 3344432    4455555554322 2678998887  875444441   347777665    56666


Q ss_pred             CCCC---------------------------cccCCCCCCCccCccccCCCCCCCCCeeeecCCCcEEecCCCCCcc
Q psy7854         102 CNPG---------------------------YEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSFQSNFQDSSPIL  151 (153)
Q Consensus       102 C~~g---------------------------~~~~~~g~~C~~i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~  151 (153)
                      |++|                           |.+.+.+..|++||||...+++|.++.|+++.|+|+|.|++||.+.
T Consensus        79 C~~G~~~~~~C~~C~~~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~g~C~n~~gsy~C~C~~Gy~g~  155 (162)
T 1uzk_A           79 CSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLN  155 (162)
T ss_dssp             TTTCCEETTTTEECCCTTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBTSEEEECSSCEEEECCTTCCBC
T ss_pred             CCCCCCcCCCcccCCCCCCCCceeECCCCCCcccCCCCCccCccccccCCCCCcCCCEeEcCCCCEEeeCCCCccCC
Confidence            6554                           4443344577899999766678987899999999999999999864

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=99.48  E-value=1.8e-14  Score=96.48  Aligned_cols=53  Identities=32%  Similarity=0.615  Sum_probs=45.5

Q ss_pred             ceeeCCCCcccCCCCCCCccCccccCCCCCCCCCeeeecCCCcEEecCCCCCcc
Q psy7854          98 YRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSFQSNFQDSSPIL  151 (153)
Q Consensus        98 ~~C~C~~g~~~~~~g~~C~~i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~  151 (153)
                      |.|.|++||.+. .+..|++||||...+++|.+++|+++.|+|+|.|++||.+.
T Consensus        88 ~~C~C~~Gy~~~-~g~~C~dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~g~  140 (147)
T 2w86_A           88 VDPICGKGYSRI-KGTQCEDIDECEVFPGVCKNGLCVNTRGSFKCQCPSGMTLD  140 (147)
T ss_dssp             CCTTTCTTEEEE-ETTEEEECCHHHHSTTCSSSSEEEEETTEEEEECCTTCCBC
T ss_pred             CcccCCCccccC-CCCccCccccccCCCCCCCCCEEECCCCCEEeeCCCCCccC
Confidence            677899999652 47889999999866788987899999999999999999865

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=99.47  E-value=1.1e-13  Score=91.41  Aligned_cols=73  Identities=30%  Similarity=0.606  Sum_probs=63.0

Q ss_pred             CCcccCCCCCCCCCC-CCceeecCCCceeeCCCCcccCCCCCCCc-cCccccCCCCCCCC-CeeeecCCCcEEecCCCCC
Q psy7854          73 HGANHHTTENPGICT-NGACENLMGTYRCICNPGYEGDPTGKLCS-DQNECLMDVMICSG-GTCKNTPGSFQSNFQDSSP  149 (153)
Q Consensus        73 C~~~~~C~~~~~~C~-~~~C~~~~g~~~C~C~~g~~~~~~g~~C~-~i~~C~~~~~~C~~-~~C~~~~g~~~C~C~~g~~  149 (153)
                      |+|+|+|....++|. ++.|++..++|.|.|++||    .|..|+ ++++|  ...+|.+ ++|+++.++|+|.|++||.
T Consensus         2 c~dideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy----~G~~C~~~~~~C--~~~~C~~~~~C~~~~g~~~C~C~~G~~   75 (135)
T 2vj3_A            2 AQDVDECSLGANPCEHAGKCINTLGSFECQCLQGY----TGPRCEIDVNEC--VSNPCQNDATCLDQIGEFQCICMPGYE   75 (135)
T ss_dssp             -CCCCTTTSSSCSSSTTCEEEECSSSEEEECCTTE----ESTTSCEECCTT--TTCCCCSSCEEEECSSCEEEECCTTEE
T ss_pred             CcccccccCCCCCCCCCCEeECCCCCEEEECCCCC----cCCcccccCccC--CCCCCCCCCEEeCCCCCceeeCCCCCc
Confidence            678999986668995 5799999999999999999    567885 89999  5678986 8999999999999999997


Q ss_pred             cc
Q psy7854         150 IL  151 (153)
Q Consensus       150 ~~  151 (153)
                      +.
T Consensus        76 G~   77 (135)
T 2vj3_A           76 GV   77 (135)
T ss_dssp             SS
T ss_pred             CC
Confidence            53

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=99.43  E-value=2.5e-14  Score=92.43  Aligned_cols=63  Identities=32%  Similarity=0.704  Sum_probs=53.3

Q ss_pred             CCCCCCceeecCCCceeeCCCCcccCCCCCCCccCccccCCCCCCCCCeeeecCCCcEEecCCCCCcc
Q psy7854          84 GICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSFQSNFQDSSPIL  151 (153)
Q Consensus        84 ~~C~~~~C~~~~g~~~C~C~~g~~~~~~g~~C~~i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~  151 (153)
                      .+|. +.|.+ .++|.|.|++||.+.. +..|++|+||.. .++| +++|+++.|+|+|.|++||.+.
T Consensus        49 ~~C~-~~C~~-~~~y~C~C~~Gy~~~~-g~~C~dideC~~-~~~C-~~~C~n~~g~y~C~C~~G~~g~  111 (118)
T 1dx5_I           49 TACP-ADCDP-NTQASCECPEGYILDD-GFICTDIDECEN-GGFC-SGVCHNLPGTFECICGPDSALA  111 (118)
T ss_dssp             SEEE-CEECT-TSTTCEECCTTEEEET-TTEEEECCHHHH-CSSC-SSEEEECSSSEEEEECSSSSCE
T ss_pred             CCCC-CcccC-CCCeEeECCCCccCCC-CCccccccccCC-CCCC-cCeEEeCCCCEEEECCCCCccC
Confidence            5565 47887 5899999999998754 889999999964 4889 4999999999999999999754

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=99.42  E-value=2.7e-14  Score=99.12  Aligned_cols=115  Identities=13%  Similarity=0.236  Sum_probs=80.0

Q ss_pred             CCCCcccCcCCCC--CCCeeeCCCceeccc----CCCCccCCCCCCCC--cCCcccCCCCCCCCCC-CCcee----ecCC
Q psy7854          30 LRRSISIDEFTVH--SSTLIALSQESQDLE----RLKFGLEPPTSRSE--VHGANHHTTENPGICT-NGACE----NLMG   96 (153)
Q Consensus        30 ~~~c~~i~~c~~~--~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~--~C~~~~~C~~~~~~C~-~~~C~----~~~g   96 (153)
                      ...|+++++|...  ...|.+.+.|.+...    .-....++++|.+.  .|+ +++|..  .+|. ++.|+    +..+
T Consensus        38 ~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~~C~-~d~C~~--~~C~~~g~C~~~~~~~~g  114 (186)
T 1z1y_A           38 ENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDTCV-LDVCQY--XNCGESGECIVEYLSEIQ  114 (186)
T ss_dssp             TTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETTEEE-EGGGTT--CCCCTTEEEEEEEETTEE
T ss_pred             CCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCCCCC-CCcCcC--CCCCCCCEEeeCCcCCCC
Confidence            4578999999743  222323344433320    11122234444433  555 799987  6796 56898    8889


Q ss_pred             CceeeCCCCcccCC-CCCCCccC--ccccCCCCCC-CC-CeeeecCCCcEEecCCCCCc
Q psy7854          97 TYRCICNPGYEGDP-TGKLCSDQ--NECLMDVMIC-SG-GTCKNTPGSFQSNFQDSSPI  150 (153)
Q Consensus        97 ~~~C~C~~g~~~~~-~g~~C~~i--~~C~~~~~~C-~~-~~C~~~~g~~~C~C~~g~~~  150 (153)
                      +|.|.|++||.+.+ ++..|+++  ++|.   .+| .+ ++|+++.|+|+|.|++||.+
T Consensus       115 ~~~C~C~~Gy~g~~~~~~~C~~~~~~~C~---~~C~~~~~~C~n~~g~y~C~C~~G~~g  170 (186)
T 1z1y_A          115 SAGCSCAIGXVPNPEDEXXCTXTGETACQ---LXCNTDNEVCXNVEGVYXCQCMEGFTF  170 (186)
T ss_dssp             EEEEEECTEEEEETTTTTEEEEEECCCCC---CCCCTTTEEEEEETTEEEEEECTTCEE
T ss_pred             CceEECCCCCcccCCCCCcceEcCCCccc---ccccccCcceecCCCCeeeECCCCCcc
Confidence            99999999998754 56889875  8994   489 65 89999999999999999964

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=99.41  E-value=1.1e-13  Score=92.63  Aligned_cols=73  Identities=19%  Similarity=0.455  Sum_probs=58.0

Q ss_pred             CCcCCcccCCCCCCCCCCC-CceeecCCCceeeCCCCcccCCCCCCCccCccccCCCCCCCCCee-eecCCCcEEecCCC
Q psy7854          70 SEVHGANHHTTENPGICTN-GACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTC-KNTPGSFQSNFQDS  147 (153)
Q Consensus        70 ~~~C~~~~~C~~~~~~C~~-~~C~~~~g~~~C~C~~g~~~~~~g~~C~~i~~C~~~~~~C~~~~C-~~~~g~~~C~C~~g  147 (153)
                      ...|.++|+|..  ++|.+ +.|++..++|.|.|++||    .|..|+++++|....+.|. ..| +++.|+|.|.|++|
T Consensus        42 ~~~c~dideC~~--~pC~n~g~C~~~~~~y~C~C~~G~----~G~~C~~~deC~~~~~~C~-~~C~~n~~g~y~C~C~~G  114 (146)
T 1x7a_L           42 WKQYVDGDQCEP--NPCLNGGLCKDDINSYECWCQVGF----EGKNCELDATCNIKNGRCK-QFCKTGADSKVLCSCTTG  114 (146)
T ss_dssp             --------CCSS--CSSCTTCEEEECSSCEEEECCSSE----ESTTTCEECCTTSGGGSCS-SBCCCCSSSCCCCBCCTT
T ss_pred             hccCCCcCcCCC--CCCCCCCEeECCCCCEEEecCCCC----cCCcCCCCccccCCCCCCc-CCCCCCCCCCEEeEcCCC
Confidence            346899999986  89974 699999999999999999    5789999999976567887 599 99999999999999


Q ss_pred             CC
Q psy7854         148 SP  149 (153)
Q Consensus       148 ~~  149 (153)
                      |.
T Consensus       115 y~  116 (146)
T 1x7a_L          115 YR  116 (146)
T ss_dssp             EE
T ss_pred             cE
Confidence            96

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=99.32  E-value=1.1e-12  Score=84.13  Aligned_cols=74  Identities=22%  Similarity=0.575  Sum_probs=54.2

Q ss_pred             cCCcccCCCCCC------CCCC-CCceeecCCCceeeCCCCcccCCCCCCCccC---ccccCCCCCCCCCeeeecCCCcE
Q psy7854          72 VHGANHHTTENP------GICT-NGACENLMGTYRCICNPGYEGDPTGKLCSDQ---NECLMDVMICSGGTCKNTPGSFQ  141 (153)
Q Consensus        72 ~C~~~~~C~~~~------~~C~-~~~C~~~~g~~~C~C~~g~~~~~~g~~C~~i---~~C~~~~~~C~~~~C~~~~g~~~  141 (153)
                      .+.|+|+|...+      +.|. +++|++..++|.|.|++||    .|..|+++   ++|....+.|. .+|+++.|+|+
T Consensus         2 ~~~d~d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G~----~G~~C~~~~~~~~C~~~~~~C~-~~C~n~~g~y~   76 (114)
T 1aut_L            2 KHVDGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGW----EGRFCQREVSFLNCSLDNGGCT-HYCLEEVGWRR   76 (114)
T ss_dssp             ------CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECTTE----ESTTSCEECCSSSSSSGGGGCS-SEEEECSSSEE
T ss_pred             cceecccccCCCccccccccCCCcCCCCCCCCCcEeeCCCCC----cCCCcCcCCcCCcCcCCCCCCC-CEeECCCCCEE
Confidence            356788888733      2274 5599999999999999999    55679764   46865456676 59999999999


Q ss_pred             EecCCCCCc
Q psy7854         142 SNFQDSSPI  150 (153)
Q Consensus       142 C~C~~g~~~  150 (153)
                      |.|++||.+
T Consensus        77 C~C~~G~~~   85 (114)
T 1aut_L           77 CSCAPGYKL   85 (114)
T ss_dssp             EECCTTEEE
T ss_pred             eECCCCeeE
Confidence            999999974

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=99.30  E-value=4.5e-13  Score=93.42  Aligned_cols=72  Identities=24%  Similarity=0.533  Sum_probs=26.6

Q ss_pred             CcCCcccCCCCCCCCCCC-CceeecCCCceeeCCCCcccCCCCCCCcc-C-ccccCCCCCCCCCeeeecCCCcEEecCCC
Q psy7854          71 EVHGANHHTTENPGICTN-GACENLMGTYRCICNPGYEGDPTGKLCSD-Q-NECLMDVMICSGGTCKNTPGSFQSNFQDS  147 (153)
Q Consensus        71 ~~C~~~~~C~~~~~~C~~-~~C~~~~g~~~C~C~~g~~~~~~g~~C~~-i-~~C~~~~~~C~~~~C~~~~g~~~C~C~~g  147 (153)
                      ..|.++|+|..  ++|.+ +.|.+..++|.|.|++||    .|..|++ + ++|....++|. ..|+++.|+|.|.|++|
T Consensus        37 ~~c~dideC~~--~pC~ngg~C~n~~g~y~C~C~~Gf----~G~~Ce~~i~deC~~~~~~C~-~~C~n~~gsy~C~C~~G  109 (195)
T 1nfu_B           37 NKYKDGDQCET--SPCQNQGKCKDGLGEYTCTCLEGF----EGKNCELFTRKLCSLDNGDCD-QFCHEEQNSVVCSCARG  109 (195)
T ss_dssp             --------------------------------------------------CCGGGTGGGGCS-SEEEEETTEEEEECCTT
T ss_pred             ccCCCCcccCC--CCCCCCCEeECCCCCeeEeCCCCc----eeccccccccccccCCCCCCC-CEeECCCCCeEEECCCC
Confidence            46899999986  88974 599999999999999999    5788986 6 89976567888 59999999999999999


Q ss_pred             CC
Q psy7854         148 SP  149 (153)
Q Consensus       148 ~~  149 (153)
                      |.
T Consensus       110 y~  111 (195)
T 1nfu_B          110 YT  111 (195)
T ss_dssp             EE
T ss_pred             ce
Confidence            97

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=99.29  E-value=4.6e-13  Score=102.40  Aligned_cols=73  Identities=30%  Similarity=0.696  Sum_probs=15.8

Q ss_pred             cccCCCCCCCCCCCCceeecCCCceeeCCCCcccCCCCCCCccCccccCCCCCCCCCeeeecCCCcEEecCCCCCc
Q psy7854          75 ANHHTTENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSFQSNFQDSSPI  150 (153)
Q Consensus        75 ~~~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~g~~C~~i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~  150 (153)
                      ++|+|...+..|.+ .|.+..++|.|.|++||.+.+++..|++++||. ..++|. ..|+++.|+|.|.|++||.+
T Consensus         2 ~~~~C~~~~~~c~~-~C~~~~g~~~C~C~~G~~l~~~~~~C~d~~eC~-~~~~C~-~~C~~~~g~~~C~C~~g~~l   74 (386)
T 3v65_B            2 GEENCNVNNGGCAQ-KCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECA-EEGYCS-QGCTNSEGAFQCWCEAGYEL   74 (386)
T ss_dssp             ----------------------------------------------------CCT-TEEC-----CCEECCTTEEE
T ss_pred             CcCcccCCCCCCCC-CCcCCCCCcEeECCCCceECCCCCccCccceeC-CcCccc-CcCCCCCCCCeEEECCCceE
Confidence            57899876667876 899999999999999999887899999999996 468898 66999999999999999963

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=99.28  E-value=2.8e-13  Score=94.02  Aligned_cols=89  Identities=18%  Similarity=0.233  Sum_probs=68.3

Q ss_pred             cccCCCCccCCCCCCCCcCCcccCCCCC--CCCCC-CCceeecC-----CCceeeCCCCcccCCCCCCCccCccccCCCC
Q psy7854          55 DLERLKFGLEPPTSRSEVHGANHHTTEN--PGICT-NGACENLM-----GTYRCICNPGYEGDPTGKLCSDQNECLMDVM  126 (153)
Q Consensus        55 ~~~~~~~~~~~~~~~~~~C~~~~~C~~~--~~~C~-~~~C~~~~-----g~~~C~C~~g~~~~~~g~~C~~i~~C~~~~~  126 (153)
                      +.|.|..||...  .+..|+++|+|...  ..+|. ++.|++..     ++|.|.|++||.+  .+..|. +++|  ...
T Consensus        25 ~~C~C~~G~~g~--~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g--~~~~C~-~d~C--~~~   97 (186)
T 1z1y_A           25 FXCMCNEGLVHL--SENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTL--XEDTCV-LDVC--QYX   97 (186)
T ss_dssp             EEEEECTTEEEE--ETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEE--ETTEEE-EGGG--TTC
T ss_pred             eEeECCCCCccC--CCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCcc--CCCCCC-CCcC--cCC
Confidence            445555555433  13489999999843  47895 46999998     8999999999976  333555 8999  456


Q ss_pred             CCCC-Ceee----ecCCCcEEecCCCCCc
Q psy7854         127 ICSG-GTCK----NTPGSFQSNFQDSSPI  150 (153)
Q Consensus       127 ~C~~-~~C~----~~~g~~~C~C~~g~~~  150 (153)
                      +|.+ +.|+    ++.++|+|.|++||.+
T Consensus        98 ~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g  126 (186)
T 1z1y_A           98 NCGESGECIVEYLSEIQSAGCSCAIGXVP  126 (186)
T ss_dssp             CCCTTEEEEEEEETTEEEEEEEECTEEEE
T ss_pred             CCCCCCEEeeCCcCCCCCceEECCCCCcc
Confidence            7985 8998    8889999999999975

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=99.26  E-value=3.2e-12  Score=98.21  Aligned_cols=70  Identities=27%  Similarity=0.686  Sum_probs=60.1

Q ss_pred             cCCCCCCCCCCCCceeecCCCceeeCCCCcccCCCCCCCccCccccCCCCCCCCCeeeecCCCcEEecCCCCCc
Q psy7854          77 HHTTENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSFQSNFQDSSPI  150 (153)
Q Consensus        77 ~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~g~~C~~i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~  150 (153)
                      |||...+..|.+ .|.+.+++|.|.|++||.+ .++..|+++|||. .+++|. ..|+|+.|+|.|.|++||.+
T Consensus         1 ~eC~~~~~~c~~-~C~~~~~~y~C~C~~G~~~-~~~~~C~dideC~-~~~~C~-~~C~n~~g~~~C~C~~g~~~   70 (400)
T 3p5b_L            1 NECLDNNGGCSH-VCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQ-DPDTCS-QLCVNLEGGYKCQCEEGFQL   70 (400)
T ss_dssp             CCTTTTGGGCSS-EEEECSSSEEEECCTTEEE-CSSSCEEECCCCS-TTSSCS-SCCBCCSSSCBCCCCTTCCC
T ss_pred             CcccCCCCCCCC-EeECCCCCeEEECCCCCCc-CCCCcccCchhhh-ccCCCC-CccCCCccceeeeccccccc
Confidence            577764455654 8999999999999999987 4688999999997 468898 69999999999999999974

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=99.26  E-value=1.1e-12  Score=86.59  Aligned_cols=72  Identities=24%  Similarity=0.533  Sum_probs=26.2

Q ss_pred             CcCCcccCCCCCCCCCCC-CceeecCCCceeeCCCCcccCCCCCCCcc-C-ccccCCCCCCCCCeeeecCCCcEEecCCC
Q psy7854          71 EVHGANHHTTENPGICTN-GACENLMGTYRCICNPGYEGDPTGKLCSD-Q-NECLMDVMICSGGTCKNTPGSFQSNFQDS  147 (153)
Q Consensus        71 ~~C~~~~~C~~~~~~C~~-~~C~~~~g~~~C~C~~g~~~~~~g~~C~~-i-~~C~~~~~~C~~~~C~~~~g~~~C~C~~g  147 (153)
                      ..|.++|+|..  ++|.+ +.|++..++|.|.|++||    .|..|++ + ++|....++|. ..|+++.|+|.|.|++|
T Consensus        37 ~~c~d~d~C~~--~pC~n~g~C~~~~~~y~C~C~~G~----~G~~C~~~i~d~C~~~~~~C~-~~C~~~~g~y~C~C~~G  109 (134)
T 2vh0_B           37 NKYKDGDQCET--SPCQNQGKCKDGLGEYTCTCLEGF----EGKNCELFTRKLCSLDNGDCD-QFCHEEQNSVVCSCARG  109 (134)
T ss_dssp             --------------------------------------------------CCGGGTGGGGCS-SEEEEETTEEEEECCTT
T ss_pred             ccCCCcCcCCC--CCCCCcCCcccCCCCEEeeCCCCc----cCCccccCCCCccccCCCCCC-CEeECCCCCEEEECCCC
Confidence            46889999986  78964 699999999999999999    5788987 7 89975557787 59999999999999999


Q ss_pred             CC
Q psy7854         148 SP  149 (153)
Q Consensus       148 ~~  149 (153)
                      |.
T Consensus       110 y~  111 (134)
T 2vh0_B          110 YT  111 (134)
T ss_dssp             EE
T ss_pred             cE
Confidence            97

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=99.21  E-value=4.4e-11  Score=97.81  Aligned_cols=72  Identities=26%  Similarity=0.672  Sum_probs=62.1

Q ss_pred             cccCCCCCCCCCCCCceeecCCCceeeCCCCcccCCCCCCCccCccccCCCCCCCCCeeeecCCCcEEecCCCCCc
Q psy7854          75 ANHHTTENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSFQSNFQDSSPI  150 (153)
Q Consensus        75 ~~~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~g~~C~~i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~  150 (153)
                      ++++|......|.+ .|.+..++|.|.|++||.+ .++..|++|+||. ..++|. +.|+|+.|+|+|.|++||.+
T Consensus       293 ~~~eC~~~~~~C~~-~C~~~~~~~~C~C~~G~~~-~~~~~C~dideC~-~~~~C~-~~C~n~~g~y~C~C~~G~~~  364 (699)
T 1n7d_A          293 GTNECLDNNGGCSH-VCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQ-DPDTCS-QLCVNLEGGYKCQCEEGFQL  364 (699)
T ss_dssp             CCCCTTSSTTTSCT-TCCCCTTCCCCCCCSSSCC-CSSSCCCCCCCCS-SSSSCT-TTCCBCSSCBCCCCCSSCBC
T ss_pred             ccccccccccCcCC-CcccCCCCcEEeCCCCeEc-CCCCcccCccccC-CCCccc-cccccCCCCeeeeeeccccc
Confidence            47788775567765 8999999999999999987 4688999999996 467887 79999999999999999975

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=99.19  E-value=2.1e-11  Score=98.08  Aligned_cols=73  Identities=23%  Similarity=0.507  Sum_probs=60.8

Q ss_pred             cccCCCCCCCCCC-CCceeecCC-Ccee-eCCCCcccCCCCCCCccCccccCCCCCCCC-C---eeeecCCCcEEe-cCC
Q psy7854          75 ANHHTTENPGICT-NGACENLMG-TYRC-ICNPGYEGDPTGKLCSDQNECLMDVMICSG-G---TCKNTPGSFQSN-FQD  146 (153)
Q Consensus        75 ~~~~C~~~~~~C~-~~~C~~~~g-~~~C-~C~~g~~~~~~g~~C~~i~~C~~~~~~C~~-~---~C~~~~g~~~C~-C~~  146 (153)
                      ++++|..  ++|. ++.|++..+ +|+| .|++||.+  .+..|++++||...++.|.+ +   .|+++.++|+|. |++
T Consensus         2 DIDeC~~--nPC~~gg~C~n~~~Gsy~C~~C~~GytG--dg~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~   77 (634)
T 1yo8_A            2 DPDGCLS--NPCFPGAQCSSFPDGSWSCGFCPVGFLG--NGTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPP   77 (634)
T ss_dssp             --CGGGG--CCSCTTCCEEECTTSCEEECCCCTTBCS--CSSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCT
T ss_pred             cccccCC--CCCCCCCEEecCCCCCeECCcCCCccCC--CCCCccccccccCCCCcccCCccccceeeccCceecccCCC
Confidence            6889976  8996 459999885 5999 99999975  56899999999766667985 7   899999999999 999


Q ss_pred             CCCcc
Q psy7854         147 SSPIL  151 (153)
Q Consensus       147 g~~~~  151 (153)
                      ||.+.
T Consensus        78 Gy~G~   82 (634)
T 1yo8_A           78 RYRGN   82 (634)
T ss_dssp             TEEEC
T ss_pred             CcccC
Confidence            99753

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=99.18  E-value=9.5e-12  Score=75.83  Aligned_cols=80  Identities=25%  Similarity=0.399  Sum_probs=56.7

Q ss_pred             ccCcCCCCCCCeeeCCCce----ecccCCCCccCCCCCCCCcCCcccCCCCCCCCCCCCceeecCCCceeeCCCCcccCC
Q psy7854          35 SIDEFTVHSSTLIALSQES----QDLERLKFGLEPPTSRSEVHGANHHTTENPGICTNGACENLMGTYRCICNPGYEGDP  110 (153)
Q Consensus        35 ~i~~c~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~C~~~~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~  110 (153)
                      ||+||......| .++.|.    .+.|.|..||......+..|+++|||...+..|.++.|+++.++|.|.|++||.+.+
T Consensus         2 dideC~~~~~~C-~~g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~   80 (86)
T 1lmj_A            2 DIDECRISPDLC-GRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSP   80 (86)
T ss_dssp             CCCTTTTCSSTT-TTSCEEEETTEEEECCCSSEEECTTTSSSEEECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCCCS
T ss_pred             ccccccCCCCCC-CCCEEECCCCCEEeeCCCCcCccCCCCCccCCcccccCCCCcCCCCEeEcCCCCEEEECcCCcccCC
Confidence            567776543222 223332    355667777765444467899999998755568767999999999999999998876


Q ss_pred             CCCCC
Q psy7854         111 TGKLC  115 (153)
Q Consensus       111 ~g~~C  115 (153)
                      +++.|
T Consensus        81 ~~~~C   85 (86)
T 1lmj_A           81 NISAC   85 (86)
T ss_dssp             SSCCC
T ss_pred             CCCcc
Confidence            66655

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=99.17  E-value=2.6e-12  Score=87.27  Aligned_cols=75  Identities=27%  Similarity=0.555  Sum_probs=57.9

Q ss_pred             CcccCCCCCCCCCCCCceeecCCCceeeCCCCcccCCCCCCCccCcc--ccCCCCCCC---CCeeeecCC----CcEEec
Q psy7854          74 GANHHTTENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNE--CLMDVMICS---GGTCKNTPG----SFQSNF  144 (153)
Q Consensus        74 ~~~~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~g~~C~~i~~--C~~~~~~C~---~~~C~~~~g----~~~C~C  144 (153)
                      +|||||.. ..+|.++.|+++.++|+|.|++||.+.+++..|+++++  |....++|.   ++.|+++.+    +|.|.|
T Consensus         1 ~dideC~~-~~~C~~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C   79 (162)
T 1uzk_A            1 TDVNECLD-PTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCC   79 (162)
T ss_dssp             CCCCGGGS-TTSSBTSEEEEETTEEEEECCTTCEECTTSSBEECCCCEEEEEEC----------CEEEEEEEECHHHHHT
T ss_pred             CccccCCC-CCCCCCCEeECCCCCEEEeCCCCCeECCCCCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCceeeC
Confidence            36899974 37897679999999999999999998878999999987  965555552   378988877    788999


Q ss_pred             CCCCC
Q psy7854         145 QDSSP  149 (153)
Q Consensus       145 ~~g~~  149 (153)
                      ++||.
T Consensus        80 ~~G~~   84 (162)
T 1uzk_A           80 SLGKA   84 (162)
T ss_dssp             TTCCE
T ss_pred             CCCCC
Confidence            98885

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=99.17  E-value=3.9e-11  Score=73.85  Aligned_cols=70  Identities=17%  Similarity=0.288  Sum_probs=53.9

Q ss_pred             CCCCCCcCCcccCCCCCCCCCCCCceeecCCCceeeCCCCcccCCCCCCCc--cCccccCCCCCCCC-CeeeecC--CCc
Q psy7854          66 PTSRSEVHGANHHTTENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCS--DQNECLMDVMICSG-GTCKNTP--GSF  140 (153)
Q Consensus        66 ~~~~~~~C~~~~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~g~~C~--~i~~C~~~~~~C~~-~~C~~~~--g~~  140 (153)
                      +++.+..| ++++|..  .+|     .+..++|.|.|++||    .  .|+  ++++|  ..++|.| ++|+++.  ++|
T Consensus         8 ~g~~g~~c-~~~~c~~--~pC-----~n~~~~y~C~C~~G~----~--~C~~~~~~~C--~~~pC~ngg~C~~~~~~~~~   71 (91)
T 1tpg_A            8 DEKTQMIY-QQHQSWL--RPV-----LRSNRVEYCWCNSGR----A--QCHSVPVKSC--SEPRCFNGGTCQQALYFSDF   71 (91)
T ss_dssp             CSSSCCBC-CSSCEEE--EEC-----SSSSCEEEEECSSSC----C--BCCEECEEEC--SSCCSCTTCEEEEESSSSCE
T ss_pred             CCCcCCeE-CCCcccC--Ccc-----ccCCCCcEeECCCCC----c--ccccCcCCcc--cCCCCCCCCEeecCCCCCCe
Confidence            33345556 3677754  444     456789999999999    3  786  78999  5688987 8999987  999


Q ss_pred             EEecCCCCCcc
Q psy7854         141 QSNFQDSSPIL  151 (153)
Q Consensus       141 ~C~C~~g~~~~  151 (153)
                      .|.|++||.+.
T Consensus        72 ~C~C~~G~~G~   82 (91)
T 1tpg_A           72 VCQCPEGFAGK   82 (91)
T ss_dssp             EEECCTTCBSS
T ss_pred             EeECCCCCcCC
Confidence            99999999764

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=99.16  E-value=3.7e-11  Score=89.58  Aligned_cols=70  Identities=24%  Similarity=0.601  Sum_probs=58.5

Q ss_pred             CcccCCCCCCCCCCC-CceeecCCCceeeCCCCcccCCCCCCCc-cCccccCC-CCCCCCCeeeecCCCcEEecCCCCCc
Q psy7854          74 GANHHTTENPGICTN-GACENLMGTYRCICNPGYEGDPTGKLCS-DQNECLMD-VMICSGGTCKNTPGSFQSNFQDSSPI  150 (153)
Q Consensus        74 ~~~~~C~~~~~~C~~-~~C~~~~g~~~C~C~~g~~~~~~g~~C~-~i~~C~~~-~~~C~~~~C~~~~g~~~C~C~~g~~~  150 (153)
                      .|+|+|..  .+|.+ +.|.+..++|.|.|++||    .|..|+ +++||... .++|.+ .|+++.|+|.|.|++||.+
T Consensus         3 ~d~~~C~~--~pC~~~g~C~~~~~~~~C~C~~g~----~g~~C~~~~~eC~~~~~~~C~~-~C~~~~g~~~C~C~~g~~~   75 (317)
T 3h5c_B            3 KGGSPCIS--QPCLHNGSCQDSIWGYTCTCSPGY----EGSNCELAKNECHPERTDGCQH-FCLPGQESYTCSCAQGYRL   75 (317)
T ss_dssp             ---CCTTS--CCCTTTCCCCCCSSSCCCCCSSSC----CSSSSCCCSSSCCTTCTTSCSS-EEECCSSSCEEECCTTEEC
T ss_pred             ccCCcCCC--CCCCCCCEeECCCCCeEEECCCCC----cCCccccCcccCCCCCCCCCcC-ccccCCCeeEEeccccccc
Confidence            46789987  78964 599999999999999999    678998 99999642 388984 9999999999999999964

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=99.16  E-value=2.2e-11  Score=80.97  Aligned_cols=71  Identities=18%  Similarity=0.558  Sum_probs=57.7

Q ss_pred             cCCcccCCCCCCCCCCC-CceeecCCCceeeCCCCcccCCCCCCCcc-Cccc---cCCCCCCCCCeeeecCC-CcEEecC
Q psy7854          72 VHGANHHTTENPGICTN-GACENLMGTYRCICNPGYEGDPTGKLCSD-QNEC---LMDVMICSGGTCKNTPG-SFQSNFQ  145 (153)
Q Consensus        72 ~C~~~~~C~~~~~~C~~-~~C~~~~g~~~C~C~~g~~~~~~g~~C~~-i~~C---~~~~~~C~~~~C~~~~g-~~~C~C~  145 (153)
                      .|.++|+|..  ++|.+ +.|++..++|.|.|++||    .|..|++ +++|   ....+.|. ..|+++.| +|.|.|+
T Consensus        43 ~c~did~C~~--~pC~n~g~C~~~~g~y~C~C~~G~----~G~~C~~~~~~c~~c~~~~~~C~-~~C~~~~g~~y~C~C~  115 (142)
T 2c4f_L           43 SYSDGDQCAS--SPCQNGGSCKDQLQSYICFCLPAF----EGRNCETHKDDQLICVNENGGCE-QYCSDHTGTKRSCRCH  115 (142)
T ss_dssp             HHTTCCGGGG--CCCCTTCEEEEETTEEEEECCTTE----ESTTSCEEGGGCCSTTTGGGGCS-SEEECCTTSCCEEECC
T ss_pred             cCCccCcCcC--CCcCCCCEEeCCCCCEEeeCCCCc----cCCccccCccccccccCCCCCcc-CEeECCCCCCEEEECC
Confidence            5778999986  88975 699999999999999999    5788986 6775   21233444 49999999 9999999


Q ss_pred             CCCC
Q psy7854         146 DSSP  149 (153)
Q Consensus       146 ~g~~  149 (153)
                      +||.
T Consensus       116 ~Gy~  119 (142)
T 2c4f_L          116 EGYS  119 (142)
T ss_dssp             TTEE
T ss_pred             CCce
Confidence            9997

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=99.15  E-value=3.3e-11  Score=99.70  Aligned_cols=71  Identities=27%  Similarity=0.679  Sum_probs=59.6

Q ss_pred             ccCCCCCCCCCCCCceeecCCCceeeCCCCcccCCCCCCCccCccccCCCCCCCCCeeeecCCCcEEecCCCCCc
Q psy7854          76 NHHTTENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTPGSFQSNFQDSSPI  150 (153)
Q Consensus        76 ~~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~g~~C~~i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~  150 (153)
                      +++|......|.+ .|.+..++|.|.|++||.+ .++..|++|+||. .+..|. +.|+|+.|+|+|.|++||.+
T Consensus       312 ~~~C~~~~~~C~~-~C~~~~~~y~C~C~~Gy~l-~~g~~C~dideC~-~~~~C~-~~C~n~~gsy~C~C~~Gy~l  382 (791)
T 3m0c_C          312 TNECLDNNGGCSH-VCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQ-DPDTCS-QLCVNLEGGYKCQCEEGFQL  382 (791)
T ss_dssp             CCSTTTGGGGCSS-EEEECSBSEEEECCTTCEE-ETTTEEECCCCCS-SSSSCT-TTCCBCSSCBCCCCCSSEEC
T ss_pred             cccccccccCccc-cccCCCCCcccCCCCCCcc-CCCCccccCcccC-CCCCCC-CeeecCCCCceeecCCCCEe
Confidence            5666654445654 8999999999999999987 5688999999997 567787 79999999999999999964

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=99.09  E-value=6.2e-11  Score=79.17  Aligned_cols=88  Identities=14%  Similarity=0.186  Sum_probs=58.2

Q ss_pred             CCCCcccCcCCCCCCCeeeCCCceecccCCCCccCCCCCCCCcCCcccCCCCCCCCCCCCce-eecCCCceeeCCCCccc
Q psy7854          30 LRRSISIDEFTVHSSTLIALSQESQDLERLKFGLEPPTSRSEVHGANHHTTENPGICTNGAC-ENLMGTYRCICNPGYEG  108 (153)
Q Consensus        30 ~~~c~~i~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~C~~~~~~C~~~~C-~~~~g~~~C~C~~g~~~  108 (153)
                      ...|.+|++|..+.  |.+.+.|.+... -....++++|.+..|+++|+|...+.+|.+ .| .+..++|.|.|++||.+
T Consensus        42 ~~~c~dideC~~~p--C~n~g~C~~~~~-~y~C~C~~G~~G~~C~~~deC~~~~~~C~~-~C~~n~~g~y~C~C~~Gy~l  117 (146)
T 1x7a_L           42 WKQYVDGDQCEPNP--CLNGGLCKDDIN-SYECWCQVGFEGKNCELDATCNIKNGRCKQ-FCKTGADSKVLCSCTTGYRL  117 (146)
T ss_dssp             --------CCSSCS--SCTTCEEEECSS-CEEEECCSSEESTTTCEECCTTSGGGSCSS-BCCCCSSSCCCCBCCTTEEE
T ss_pred             hccCCCcCcCCCCC--CCCCCEeECCCC-CEEEecCCCCcCCcCCCCccccCCCCCCcC-CCCCCCCCCEEeEcCCCcEe
Confidence            45789999997543  323344433222 223345666668899999999875567877 89 99999999999999998


Q ss_pred             CCCCCCCccCccc
Q psy7854         109 DPTGKLCSDQNEC  121 (153)
Q Consensus       109 ~~~g~~C~~i~~C  121 (153)
                      ..+|..|+++++.
T Consensus       118 ~~dG~~C~~~~~~  130 (146)
T 1x7a_L          118 APDQKSCKPAVPF  130 (146)
T ss_dssp             CTTSSSEEECSSS
T ss_pred             CCCCCcCCCCCCC
Confidence            7789999988654

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=99.08  E-value=5.6e-11  Score=78.98  Aligned_cols=94  Identities=18%  Similarity=0.273  Sum_probs=66.5

Q ss_pred             ccCCCCcccCcCCCCCC-CeeeCCCce----ecccCCCCccCCCCCC-------CCcCCcccCCCCCCCCCC-CCceeec
Q psy7854          28 VALRRSISIDEFTVHSS-TLIALSQES----QDLERLKFGLEPPTSR-------SEVHGANHHTTENPGICT-NGACENL   94 (153)
Q Consensus        28 ~~~~~c~~i~~c~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~-------~~~C~~~~~C~~~~~~C~-~~~C~~~   94 (153)
                      .+...|++|++|..... .|.+++.|.    .+.|.|..||......       +..|+++|+|....++|. ++.|+++
T Consensus        36 ~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~~~~~~~~~C~dideC~~~~~~C~~~~~C~n~  115 (143)
T 2bou_A           36 TPMETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQDVDECSSGQHQCDSSTVCFNT  115 (143)
T ss_dssp             STTCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCCSCBSSGGGCCEEECCHHHHTCCCCCTTSEEEEC
T ss_pred             CCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCccccccCCCCCcCCccCccCcCCCCCCCCEEECC
Confidence            45678999999976422 122233332    2445566666544221       347999999987668896 4699999


Q ss_pred             CCCceeeCCCCcccCCCCCCCccCccc
Q psy7854          95 MGTYRCICNPGYEGDPTGKLCSDQNEC  121 (153)
Q Consensus        95 ~g~~~C~C~~g~~~~~~g~~C~~i~~C  121 (153)
                      .++|+|.|++||.+...+..|+++++|
T Consensus       116 ~g~y~C~C~~Gy~g~~~~~~C~~~~~C  142 (143)
T 2bou_A          116 VGSYSCRCRPGWKPRHGIPNNQKDTVC  142 (143)
T ss_dssp             SSCEEEECCSSSCBCTTCCSSBTTCCB
T ss_pred             CCCEEeeCCCCcccCCCCccCccCCcc
Confidence            999999999999998778888888877

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=99.05  E-value=2.7e-10  Score=68.69  Aligned_cols=76  Identities=20%  Similarity=0.334  Sum_probs=51.3

Q ss_pred             CCcccCcCCCCCCCeeeCCCceecccCCCCccCCCCCC--CCcCCcccCCCCCCCCCCCCceeecCCCceeeCCCCcccC
Q psy7854          32 RSISIDEFTVHSSTLIALSQESQDLERLKFGLEPPTSR--SEVHGANHHTTENPGICTNGACENLMGTYRCICNPGYEGD  109 (153)
Q Consensus        32 ~c~~i~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~C~~~~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~  109 (153)
                      +|.||+||... . .+.++.|.+... -....++++|.  +..|+++|+|.. .++|.++.|.+..++|.|.|++||.+.
T Consensus         1 sC~dideC~~~-~-~C~~g~C~n~~g-~y~C~C~~Gy~~~g~~C~dideC~~-~~~C~~~~C~n~~g~y~C~C~~G~~g~   76 (82)
T 1emn_A            1 SAVDMDECKEP-D-VCKHGQCINTDG-SYRCECPFGYILAGNECVDTDECSV-GNPCGNGTCKNVIGGFECTCEEGFEPG   76 (82)
T ss_dssp             CCCCCCSSSST-T-SCSSSEECCCSS-CCCEECCTTEEEETTEEEECCGGGT-CCTTSSSCEEECSSSEEECCSSSSCCC
T ss_pred             CCCccccCCCC-C-CcCCCEEEecCC-CEEEECCCCeECCCCccCCcccccC-CCCCCCCEeECCCCCEEeECCCCeEeC
Confidence            47788998752 1 233444433221 11223444443  678999999974 378977799999999999999999775


Q ss_pred             CC
Q psy7854         110 PT  111 (153)
Q Consensus       110 ~~  111 (153)
                      +.
T Consensus        77 ~~   78 (82)
T 1emn_A           77 PM   78 (82)
T ss_dssp             SS
T ss_pred             CC
Confidence            44

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=98.96  E-value=7.6e-10  Score=73.33  Aligned_cols=67  Identities=22%  Similarity=0.528  Sum_probs=49.5

Q ss_pred             cCCCCCCCCCC-CCceeecC--CCceeeCCCCcccCCCCCCCc-------------cCccccCCCCCCCC-Ceee-----
Q psy7854          77 HHTTENPGICT-NGACENLM--GTYRCICNPGYEGDPTGKLCS-------------DQNECLMDVMICSG-GTCK-----  134 (153)
Q Consensus        77 ~~C~~~~~~C~-~~~C~~~~--g~~~C~C~~g~~~~~~g~~C~-------------~i~~C~~~~~~C~~-~~C~-----  134 (153)
                      |+|..  .+|. ++.|++..  ++|.|.|++||.    |..|+             ++++|  ..++|.+ +.|+     
T Consensus         1 d~C~~--~pC~~~g~C~~~~~~g~~~C~C~~G~~----G~~C~~~~~~~~~~~~c~~~~~C--~~~~C~~~g~C~~~~~~   72 (143)
T 4d90_A            1 DICDP--NPCENGGICLPGLADGSFSCECPDGFT----DPNCSSVVEVASDEEEPTSAGPC--TPNPCHNGGTCEISEAY   72 (143)
T ss_dssp             --CCS--CCCGGGCEEEC-----CCEEECCTTCC----TTTTCSCCCCTTTTTSCCCCCTT--SSCCCCTTCEEEECCCE
T ss_pred             CcCCC--CcCCCCCEeeCCCCCCCEEeECCCCCC----CCCCccCccccccccccccCCcC--CCCCCCCCCEecCCCcc
Confidence            46765  7895 56999875  689999999994    55554             46778  5678986 8999     


Q ss_pred             --ecCCCcEEecCCCCCcc
Q psy7854         135 --NTPGSFQSNFQDSSPIL  151 (153)
Q Consensus       135 --~~~g~~~C~C~~g~~~~  151 (153)
                        ++.++|.|.|++||.+.
T Consensus        73 ~~~~~~~~~C~C~~G~~G~   91 (143)
T 4d90_A           73 RGDTFIGYVCKCPRGFNGI   91 (143)
T ss_dssp             ETTEECCEEEECCTTEEST
T ss_pred             ccCCCCCeEeECcCCCcCC
Confidence              67789999999999754

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=98.96  E-value=6.2e-10  Score=67.82  Aligned_cols=80  Identities=20%  Similarity=0.320  Sum_probs=53.0

Q ss_pred             ccCcCCCCCCCeeeCCCce----ecccCCCCccCCCCCCCCcCCcccCCCCCCCCCCCCceeecCCCceeeC--CCCccc
Q psy7854          35 SIDEFTVHSSTLIALSQES----QDLERLKFGLEPPTSRSEVHGANHHTTENPGICTNGACENLMGTYRCIC--NPGYEG  108 (153)
Q Consensus        35 ~i~~c~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~C~~~~~C~~~~~~C~~~~C~~~~g~~~C~C--~~g~~~  108 (153)
                      ||+||......| ..+.|.    .+.|.|..||..... +..|+++|+|..  ++|. +.|++..++|+|.|  ..||..
T Consensus         2 dideC~~~~~~C-~~~~C~n~~g~y~C~C~~G~~~~~~-g~~C~dideC~~--~~C~-~~C~n~~g~y~C~C~g~~G~~~   76 (87)
T 1z6c_A            2 DVDECSLKPSIC-GTAVCKNIPGDFECECPEGYRYNLK-SKSCEDIDECSE--NMCA-QLCVNYPGGYTCYCDGKKGFKL   76 (87)
T ss_dssp             CSCSSSSSSSSB-TTSSCCCBTTBCCCSSSTTCEEETT-TTEEECCCHHHH--SCCS-SEECCCSSSCCEECCSSSCCBC
T ss_pred             ccccccCCCCCC-CCCEeECCCCCEEEECCCCceECCC-CCcCCCcCeeCC--CCCC-CEEEccCCCEEEECCCCcCCcc
Confidence            577776554323 334443    244555555543221 578999999976  7897 59999999999999  577766


Q ss_pred             CCCCCCCccCc
Q psy7854         109 DPTGKLCSDQN  119 (153)
Q Consensus       109 ~~~g~~C~~i~  119 (153)
                      ..++..|++|+
T Consensus        77 ~~~~~~C~di~   87 (87)
T 1z6c_A           77 AQDQKSCEVVS   87 (87)
T ss_dssp             CTTSSSCBCCC
T ss_pred             cCCCCcceECc
Confidence            55666676653

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=98.87  E-value=6.5e-10  Score=77.41  Aligned_cols=86  Identities=14%  Similarity=0.161  Sum_probs=36.6

Q ss_pred             CCCCcccCcCCCCCCCeeeCCCceecccCCCCccCCCCCCCCcCCc-c-cCCCCCCCCCCCCceeecCCCceeeCCCCcc
Q psy7854          30 LRRSISIDEFTVHSSTLIALSQESQDLERLKFGLEPPTSRSEVHGA-N-HHTTENPGICTNGACENLMGTYRCICNPGYE  107 (153)
Q Consensus        30 ~~~c~~i~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~-~-~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~  107 (153)
                      ...|.++++|..+.  |.+.+.|.+... -....++++|.+..|++ + ++|...+.+|.+ .|.+..++|.|.|++||.
T Consensus        36 w~~c~dideC~~~p--C~ngg~C~n~~g-~y~C~C~~Gf~G~~Ce~~i~deC~~~~~~C~~-~C~n~~gsy~C~C~~Gy~  111 (195)
T 1nfu_B           36 WNKYKDGDQCETSP--CQNQGKCKDGLG-EYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQ-FCHEEQNSVVCSCARGYT  111 (195)
T ss_dssp             ------------------------------------------------CCGGGTGGGGCSS-EEEEETTEEEEECCTTEE
T ss_pred             cccCCCCcccCCCC--CCCCCEeECCCC-CeeEeCCCCceeccccccccccccCCCCCCCC-EeECCCCCeEEECCCCce
Confidence            34689999997542  334455533222 22344566667889986 6 899875567877 999999999999999999


Q ss_pred             cCCCCCCCccCc
Q psy7854         108 GDPTGKLCSDQN  119 (153)
Q Consensus       108 ~~~~g~~C~~i~  119 (153)
                      +..+|..|+++.
T Consensus       112 l~~dG~~C~~~~  123 (195)
T 1nfu_B          112 LADNGKACIPTG  123 (195)
T ss_dssp             ECTTSSCEEESS
T ss_pred             eCCCCCccccCC
Confidence            877899998763

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=98.86  E-value=6.7e-10  Score=71.50  Aligned_cols=67  Identities=18%  Similarity=0.502  Sum_probs=51.6

Q ss_pred             CcccCCCCCCCCCCCCceeec-CCCceeeCCCCcccCCCCCCCccCccccC--CCCCCCCCeeeecCCCcEEecCCCCCc
Q psy7854          74 GANHHTTENPGICTNGACENL-MGTYRCICNPGYEGDPTGKLCSDQNECLM--DVMICSGGTCKNTPGSFQSNFQDSSPI  150 (153)
Q Consensus        74 ~~~~~C~~~~~~C~~~~C~~~-~g~~~C~C~~g~~~~~~g~~C~~i~~C~~--~~~~C~~~~C~~~~g~~~C~C~~g~~~  150 (153)
                      +++|+|..  ++|.+ .|++. .++|+|.|++||.+..     .++++|..  ..++|. +.|++ .++|.|.|++||.+
T Consensus         2 ~dideC~~--~pC~~-~C~~~~~g~y~C~C~~Gy~g~~-----~~~~~C~~~C~~~~C~-~~C~~-~~~y~C~C~~Gy~~   71 (118)
T 1dx5_I            2 EPVDPCFR--ANCEY-QCQPLDQTSYLCVCAEGFAPIP-----HEPHRCQMFCNQTACP-ADCDP-NTQASCECPEGYIL   71 (118)
T ss_dssp             CCCCGGGG--CCCSS-EEEECSSSCEEEECCTTEEEET-----TEEEEEEECCCSSEEE-CEECT-TSTTCEECCTTEEE
T ss_pred             CccccCCC--CCCCC-CCCCCCCCCEEeECCCCccccC-----CCCCccccccCCCCCC-CcccC-CCCeEeECCCCccC
Confidence            36899975  89986 99999 9999999999997642     14445532  345565 78888 58899999999973

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=98.85  E-value=6.3e-10  Score=73.19  Aligned_cols=86  Identities=14%  Similarity=0.161  Sum_probs=36.2

Q ss_pred             CCCCcccCcCCCCCCCeeeCCCceecccCCCCccCCCCCCCCcCCc-c-cCCCCCCCCCCCCceeecCCCceeeCCCCcc
Q psy7854          30 LRRSISIDEFTVHSSTLIALSQESQDLERLKFGLEPPTSRSEVHGA-N-HHTTENPGICTNGACENLMGTYRCICNPGYE  107 (153)
Q Consensus        30 ~~~c~~i~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~-~-~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~  107 (153)
                      ...|.++++|..+.  |.+.+.|.+... -....++++|.+..|++ + |+|...+.+|.+ .|.+..++|.|.|++||.
T Consensus        36 ~~~c~d~d~C~~~p--C~n~g~C~~~~~-~y~C~C~~G~~G~~C~~~i~d~C~~~~~~C~~-~C~~~~g~y~C~C~~Gy~  111 (134)
T 2vh0_B           36 WNKYKDGDQCETSP--CQNQGKCKDGLG-EYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQ-FCHEEQNSVVCSCARGYT  111 (134)
T ss_dssp             ------------------------------------------------CCGGGTGGGGCSS-EEEEETTEEEEECCTTEE
T ss_pred             cccCCCcCcCCCCC--CCCcCCcccCCC-CEEeeCCCCccCCccccCCCCccccCCCCCCC-EeECCCCCEEEECCCCcE
Confidence            34689999997542  334445533221 12334566666789987 6 889875567877 999999999999999999


Q ss_pred             cCCCCCCCccCc
Q psy7854         108 GDPTGKLCSDQN  119 (153)
Q Consensus       108 ~~~~g~~C~~i~  119 (153)
                      +..+|..|++++
T Consensus       112 l~~~g~~C~~~~  123 (134)
T 2vh0_B          112 LADNGKACIPTG  123 (134)
T ss_dssp             ECTTSSCEEESS
T ss_pred             ECCCCCccCcCC
Confidence            877889998774

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=98.84  E-value=8.4e-09  Score=76.76  Aligned_cols=85  Identities=14%  Similarity=0.217  Sum_probs=59.8

Q ss_pred             cccCcCCCCCCCeeeCCCceecccCCCCccCCCCCCCCcCC-cccCCCCC-CCCCCCCceeecCCCceeeCCCCcccCCC
Q psy7854          34 ISIDEFTVHSSTLIALSQESQDLERLKFGLEPPTSRSEVHG-ANHHTTEN-PGICTNGACENLMGTYRCICNPGYEGDPT  111 (153)
Q Consensus        34 ~~i~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~-~~~~C~~~-~~~C~~~~C~~~~g~~~C~C~~g~~~~~~  111 (153)
                      .|+++|..+.  |.+.+.|.... .-....+++++.+..|+ ++|+|... ..+|.+ .|.+..++|.|.|.+||.+..+
T Consensus         3 ~d~~~C~~~p--C~~~g~C~~~~-~~~~C~C~~g~~g~~C~~~~~eC~~~~~~~C~~-~C~~~~g~~~C~C~~g~~~~~~   78 (317)
T 3h5c_B            3 KGGSPCISQP--CLHNGSCQDSI-WGYTCTCSPGYEGSNCELAKNECHPERTDGCQH-FCLPGQESYTCSCAQGYRLGED   78 (317)
T ss_dssp             ---CCTTSCC--CTTTCCCCCCS-SSCCCCCSSSCCSSSSCCCSSSCCTTCTTSCSS-EEECCSSSCEEECCTTEECCTT
T ss_pred             ccCCcCCCCC--CCCCCEeECCC-CCeEEECCCCCcCCccccCcccCCCCCCCCCcC-ccccCCCeeEEecccccccccc
Confidence            3567776542  32334443222 22234456667788997 99999863 378987 9999999999999999999888


Q ss_pred             CCCCccCcccc
Q psy7854         112 GKLCSDQNECL  122 (153)
Q Consensus       112 g~~C~~i~~C~  122 (153)
                      +..|.++++|.
T Consensus        79 ~~~C~~~~~c~   89 (317)
T 3h5c_B           79 HKQCVPHDQCA   89 (317)
T ss_dssp             SSCCEECSSCC
T ss_pred             ccccccccccc
Confidence            88999988874

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=98.83  E-value=3.5e-09  Score=67.69  Aligned_cols=68  Identities=19%  Similarity=0.269  Sum_probs=47.8

Q ss_pred             ccCCCCCCCCcCCcc---cCCCCCCCCCCCCceeecCCCceeeCCCCcccCCCCCCCccCccccCCCCCCCC-Ceeee
Q psy7854          62 GLEPPTSRSEVHGAN---HHTTENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSG-GTCKN  135 (153)
Q Consensus        62 ~~~~~~~~~~~C~~~---~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~g~~C~~i~~C~~~~~~C~~-~~C~~  135 (153)
                      ..++++|.+..|+++   ++|......|.+ .|++..++|.|.|++||.+..+++.|+++.     ..+|.+ +.|+.
T Consensus        37 C~C~~G~~G~~C~~~~~~~~C~~~~~~C~~-~C~n~~g~y~C~C~~G~~~~~~g~~C~~~~-----~~pC~~~~~~i~  108 (114)
T 1aut_L           37 CDCRSGWEGRFCQREVSFLNCSLDNGGCTH-YCLEEVGWRRCSCAPGYKLGDDLLQCHPAV-----KFPCGRPWKRME  108 (114)
T ss_dssp             EEECTTEESTTSCEECCSSSSSSGGGGCSS-EEEECSSSEEEECCTTEEECTTSSCEEECS-----SSCTTCCC----
T ss_pred             eeCCCCCcCCCcCcCCcCCcCcCCCCCCCC-EeECCCCCEEeECCCCeeECCCCCccCcCc-----ccCCCCCCccCC
Confidence            345566667789875   368764467766 899999999999999999887888998763     345653 45543

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...

Probab=98.80  E-value=2e-09  Score=59.92  Aligned_cols=45  Identities=22%  Similarity=0.466  Sum_probs=39.5

Q ss_pred             cCCCCCCCCCCCCceeecCCCceeeCCCCcccCCCCCCCccCcccc
Q psy7854          77 HHTTENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECL  122 (153)
Q Consensus        77 ~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~g~~C~~i~~C~  122 (153)
                      |||....+.|.+ .|.|++|+|.|.|++||.+..+++.|++++||.
T Consensus         2 dEC~~~~~~C~~-~C~nt~Gsy~C~C~~Gy~L~~d~~~C~didec~   46 (55)
T 2jkh_L            2 KLCSLDNGDCDQ-FCHEEQNSVVCSCARGYTLADNGKACIPTGPYP   46 (55)
T ss_dssp             CCTTTGGGGCSS-EEEEETTEEEEECCTTEEECTTSSCEEESSSSC
T ss_pred             ccccCCCCCcCc-EeEcCCCCeEEeCCCCCEECCCCCeeccCcccc
Confidence            677765567876 899999999999999999988999999999984

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=98.78  E-value=5.2e-09  Score=71.39  Aligned_cols=76  Identities=25%  Similarity=0.538  Sum_probs=57.4

Q ss_pred             CCCCCCCCcCCcccCCCCCCCCCCCCceeecCCCceeeCCCCcccCCCCCCCc-cCccccCCCCCCCC-Ceeeec-CCCc
Q psy7854          64 EPPTSRSEVHGANHHTTENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCS-DQNECLMDVMICSG-GTCKNT-PGSF  140 (153)
Q Consensus        64 ~~~~~~~~~C~~~~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~g~~C~-~i~~C~~~~~~C~~-~~C~~~-~g~~  140 (153)
                      ++++|.+..|+   +|... ..|.++.|.   ++|.|.|++||    .|..|+ ++++|.. ..+|.+ +.|+++ +++|
T Consensus        87 C~~G~~G~~C~---~C~~~-~~C~~g~C~---~~~~C~C~~G~----~G~~C~~~~~~C~~-~~~C~~~g~C~~~~~~~~  154 (169)
T 2vj2_A           87 CQYGWQGLYCD---KCIPH-PGCVHGICN---EPWQCLCETNW----GGQLCDKDLNYCGT-HQPCLNGGTCSNTGPDKY  154 (169)
T ss_dssp             ECTTEESSSSC---EECCC-TTCSSEECS---STTCCEECTTE----ETTTTCEESCHHHH-TCCCCTTCEEEECSTTCE
T ss_pred             CCCCCCCCCcc---cCCCC-CCCCCCCcC---CCCEEeCCCCC----CCCcccCCCCCCCC-CCCCCCCCEEcCCCCCCc
Confidence            44455566664   35441 237666776   67999999999    567897 8999963 578986 899996 8999


Q ss_pred             EEecCCCCCcc
Q psy7854         141 QSNFQDSSPIL  151 (153)
Q Consensus       141 ~C~C~~g~~~~  151 (153)
                      +|.|++||.+.
T Consensus       155 ~C~C~~G~~G~  165 (169)
T 2vj2_A          155 QCSCPEGYSGP  165 (169)
T ss_dssp             EEECCTTCCST
T ss_pred             EeECCCCCcCc
Confidence            99999999865

>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*

Probab=98.76  E-value=3.6e-09  Score=61.52  Aligned_cols=48  Identities=23%  Similarity=0.462  Sum_probs=42.6

Q ss_pred             CcccCCCCCCCCCCCCceeecCC-CceeeCCCCcccCCCCCCCccCcccc
Q psy7854          74 GANHHTTENPGICTNGACENLMG-TYRCICNPGYEGDPTGKLCSDQNECL  122 (153)
Q Consensus        74 ~~~~~C~~~~~~C~~~~C~~~~g-~~~C~C~~g~~~~~~g~~C~~i~~C~  122 (153)
                      +|+|+|....+.|.+ .|.++.+ +|.|.|++||.+.++++.|.+++||.
T Consensus         3 ~d~~eC~~~nggC~h-~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d~dec~   51 (69)
T 1kli_L            3 DDQLICVNENGGCEQ-YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYP   51 (69)
T ss_dssp             SCCCCTTSGGGGCSS-EEEEETTTEEEEECCTTEEECTTSSCEEECSSSC
T ss_pred             cccccccCCCCCcCC-EeEcCCCCCEEEeCCCCCeECCCCCcccCccccc
Confidence            578899876678977 8999998 89999999999998999999999984

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=98.62  E-value=3.1e-08  Score=65.67  Aligned_cols=86  Identities=16%  Similarity=0.221  Sum_probs=57.3

Q ss_pred             CCCcccCcCCCCCCCeeeCCCceecccCCCCccCCCCCCCCcCCc-ccCCCC---CCCCCCCCceeecCC-CceeeCCCC
Q psy7854          31 RRSISIDEFTVHSSTLIALSQESQDLERLKFGLEPPTSRSEVHGA-NHHTTE---NPGICTNGACENLMG-TYRCICNPG  105 (153)
Q Consensus        31 ~~c~~i~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~-~~~C~~---~~~~C~~~~C~~~~g-~~~C~C~~g  105 (153)
                      ..+.++++|..+.  |.+.+.|.+... -....++++|.+..|++ +++|..   ..+.|.+ .|++..+ +|.|.|++|
T Consensus        42 ~~c~did~C~~~p--C~n~g~C~~~~g-~y~C~C~~G~~G~~C~~~~~~c~~c~~~~~~C~~-~C~~~~g~~y~C~C~~G  117 (142)
T 2c4f_L           42 ISYSDGDQCASSP--CQNGGSCKDQLQ-SYICFCLPAFEGRNCETHKDDQLICVNENGGCEQ-YCSDHTGTKRSCRCHEG  117 (142)
T ss_dssp             HHHTTCCGGGGCC--CCTTCEEEEETT-EEEEECCTTEESTTSCEEGGGCCSTTTGGGGCSS-EEECCTTSCCEEECCTT
T ss_pred             ccCCccCcCcCCC--cCCCCEEeCCCC-CEEeeCCCCccCCccccCccccccccCCCCCccC-EeECCCCCCEEEECCCC
Confidence            3567889987542  323344433221 12234555566788986 677532   2234544 8999999 999999999


Q ss_pred             cccCCCCCCCccCcc
Q psy7854         106 YEGDPTGKLCSDQNE  120 (153)
Q Consensus       106 ~~~~~~g~~C~~i~~  120 (153)
                      |.+..+|..|+++++
T Consensus       118 y~l~~dG~~C~~~~e  132 (142)
T 2c4f_L          118 YSLLADGVSCTPTVE  132 (142)
T ss_dssp             EEECTTSSCEEESSS
T ss_pred             ceECCCCCCCCCCCc
Confidence            998778999998876

>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1

Probab=98.54  E-value=3.6e-08  Score=53.88  Aligned_cols=39  Identities=26%  Similarity=0.563  Sum_probs=34.5

Q ss_pred             CCCCCCCCceeecCCCceeeCCCCcccCCCCCCCccCccc
Q psy7854          82 NPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNEC  121 (153)
Q Consensus        82 ~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~g~~C~~i~~C  121 (153)
                      ..+.|.+ .|.|++++|.|.|++||.+.++++.|++++|+
T Consensus         4 ~ng~C~~-~C~n~~gs~~C~C~~Gy~L~~d~~tC~dide~   42 (51)
T 1kig_L            4 DNGGCDQ-FCREERSEVRCSCAHGYVLGDDSKSCVSTERF   42 (51)
T ss_dssp             TTTSSSS-CCCEETTEECCCCCTTEEECTTSSCEEECSSS
T ss_pred             CCCCcCC-EeEcCCCCeEEeCCCCcEECCCCCccccCCcc
Confidence            3467866 79999999999999999998899999999987

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=98.53  E-value=1.2e-08  Score=64.47  Aligned_cols=78  Identities=22%  Similarity=0.367  Sum_probs=21.4

Q ss_pred             CCCcccCcCCCCCC----CeeeCCCceecccCCCCccCCCCCCCCcCCcccCCCCCCCCCCCCceeecCCCceeeCCCCc
Q psy7854          31 RRSISIDEFTVHSS----TLIALSQESQDLERLKFGLEPPTSRSEVHGANHHTTENPGICTNGACENLMGTYRCICNPGY  106 (153)
Q Consensus        31 ~~c~~i~~c~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~  106 (153)
                      ..| ++++|.....    .|.+..+  .+.|.|..||...  .+..|+++|||.. +.+|. +.|++..++|.|.|++||
T Consensus        25 ~~C-d~neC~~~~~~C~~~C~n~~g--~y~C~C~~Gy~g~--~g~~C~dideC~~-~~~C~-~~C~n~~gsy~C~C~~Gy   97 (107)
T 2w2n_E           25 GAM-GTNECLDNNGGCSYVCNDLKI--GYECLCPDGFQLV--AQRRCEDIDECQD-PDTCS-QLCVNLEGGYKCQCEEGF   97 (107)
T ss_dssp             CCB-SCCGGGTGGGGCSSEEECCSB--SCEEECCTTCEEE--TTTEEEC-------------------------------
T ss_pred             CCC-cCccCcCCCCCCCCEeEeCCC--CeEEECCCCcccc--CCCccccccccCC-CCCcC-CeeecCCCCEEEECCCCc
Confidence            445 7888865322    2333222  3455666666542  2368999999974 46886 499999999999999999


Q ss_pred             ccCCCCCCC
Q psy7854         107 EGDPTGKLC  115 (153)
Q Consensus       107 ~~~~~g~~C  115 (153)
                      .+.++++.|
T Consensus        98 ~~~~d~~~C  106 (107)
T 2w2n_E           98 QLDPHTKAC  106 (107)
T ss_dssp             ---------
T ss_pred             eECCCCCcc
Confidence            886666555

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.49  E-value=3.6e-08  Score=75.22  Aligned_cols=82  Identities=17%  Similarity=0.365  Sum_probs=25.0

Q ss_pred             ccCcCCCCCCCeee--CCCceecccCCCCccCCCCCCCCcCCcccCCCCCCCCCCCCceeecCCCceeeCCCCcccCCCC
Q psy7854          35 SIDEFTVHSSTLIA--LSQESQDLERLKFGLEPPTSRSEVHGANHHTTENPGICTNGACENLMGTYRCICNPGYEGDPTG  112 (153)
Q Consensus        35 ~i~~c~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~g  112 (153)
                      +++||......|-+  ...-..+.|.|..||.+... +..|+++|||. ...+|.+ .|.+..++|.|.|.+||.+.+++
T Consensus         2 ~~~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~~-~~~C~d~~eC~-~~~~C~~-~C~~~~g~~~C~C~~g~~l~~d~   78 (386)
T 3v65_B            2 GEENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTED-GRTCQDVNECA-EEGYCSQ-GCTNSEGAFQCWCEAGYELRPDR   78 (386)
T ss_dssp             ----------------------------------------------------CCTT-EEC-----CCEECCTTEEECTTS
T ss_pred             CcCcccCCCCCCCCCCcCCCCCcEeECCCCceECCC-CCccCccceeC-CcCcccC-cCCCCCCCCeEEECCCceEcCCC
Confidence            56777654322211  01112355667667664432 67899999997 3478977 69999999999999999988788


Q ss_pred             CCCccCc
Q psy7854         113 KLCSDQN  119 (153)
Q Consensus       113 ~~C~~i~  119 (153)
                      +.|..++
T Consensus        79 ~~C~~~~   85 (386)
T 3v65_B           79 RSCKALG   85 (386)
T ss_dssp             SCEEECS
T ss_pred             CeECCcc
Confidence            8887654

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1

Probab=98.47  E-value=1.1e-07  Score=52.12  Aligned_cols=42  Identities=29%  Similarity=0.653  Sum_probs=34.1

Q ss_pred             CcccCCCCC--------CCCCCCCceeecCCCceeeCCCCcccCCCCCCCc
Q psy7854          74 GANHHTTEN--------PGICTNGACENLMGTYRCICNPGYEGDPTGKLCS  116 (153)
Q Consensus        74 ~~~~~C~~~--------~~~C~~~~C~~~~g~~~C~C~~g~~~~~~g~~C~  116 (153)
                      +|||||...        ..+|.+ .|.|+.|+|.|.|++||.+..+++.|.
T Consensus         2 ~DidEC~~~~~~~~~~~~~~C~~-~C~n~~Gsy~C~C~~Gy~~~~d~~~C~   51 (53)
T 1apq_A            2 VDLDECASRSKSGEEDPQPQCQH-LCHNYVGGYFCSCRPGYELQEDRHSCQ   51 (53)
T ss_dssp             CSCCTTTCSTTTCCCSSSCTTSS-EEEEETTEEEEECSTTCEECTTSSCEE
T ss_pred             CccccccCcccccccccCCCCCC-EeECCCCCeEEECCCCCeECCCCCccC
Confidence            467888753        267875 999999999999999999877777764

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=98.45  E-value=3.7e-08  Score=65.53  Aligned_cols=52  Identities=29%  Similarity=0.650  Sum_probs=43.3

Q ss_pred             CCCCC---CCCcCCcccCCCCCCCCCCCCceeecCCCceeeCCCCcccCCCCCCC
Q psy7854          64 EPPTS---RSEVHGANHHTTENPGICTNGACENLMGTYRCICNPGYEGDPTGKLC  115 (153)
Q Consensus        64 ~~~~~---~~~~C~~~~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~g~~C  115 (153)
                      ++++|   .+..|++||||...+++|.++.|+++.++|+|.|++||.+..+++.|
T Consensus        92 C~~Gy~~~~g~~C~dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~g~~~~~~C  146 (147)
T 2w86_A           92 CGKGYSRIKGTQCEDIDECEVFPGVCKNGLCVNTRGSFKCQCPSGMTLDATGRIC  146 (147)
T ss_dssp             TCTTEEEEETTEEEECCHHHHSTTCSSSSEEEEETTEEEEECCTTCCBCTTSSCB
T ss_pred             CCCccccCCCCccCccccccCCCCCCCCCEEECCCCCEEeeCCCCCccCCCCCee
Confidence            45555   37789999999876677987799999999999999999887777665

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=98.44  E-value=2.3e-07  Score=47.62  Aligned_cols=33  Identities=21%  Similarity=0.396  Sum_probs=29.3

Q ss_pred             cCccccCCCCCCCC-CeeeecCCCcEEecCCCCCcc
Q psy7854         117 DQNECLMDVMICSG-GTCKNTPGSFQSNFQDSSPIL  151 (153)
Q Consensus       117 ~i~~C~~~~~~C~~-~~C~~~~g~~~C~C~~g~~~~  151 (153)
                      ++++|  ..++|.+ +.|+++.++|.|.|++||.+.
T Consensus         2 d~d~C--~~~pC~ngg~C~~~~~~~~C~C~~G~~G~   35 (39)
T 1edm_B            2 DGDQC--ESNPCLNGGSCKDDINSYECWCPFGFEGK   35 (39)
T ss_dssp             CCCTT--TTCCCCTTCEEEEETTEEEEECCTTCCST
T ss_pred             ccccC--CCCCCCCCCEeEcCCCceEeECCCCCcCC
Confidence            68899  5789987 899999999999999999865

>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*

Probab=98.44  E-value=9e-08  Score=52.67  Aligned_cols=38  Identities=29%  Similarity=0.623  Sum_probs=34.0

Q ss_pred             CCCCCCCceeecCC-CceeeCCCCcccCCCCCCCccCccc
Q psy7854          83 PGICTNGACENLMG-TYRCICNPGYEGDPTGKLCSDQNEC  121 (153)
Q Consensus        83 ~~~C~~~~C~~~~g-~~~C~C~~g~~~~~~g~~C~~i~~C  121 (153)
                      .+.|.+ .|.++.+ +|.|.|++||.+.++++.|++++||
T Consensus         6 nggC~~-~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d~dec   44 (53)
T 2bz6_L            6 NGGCEQ-YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEY   44 (53)
T ss_dssp             GGGCSS-EEEEETTTEEEEECCTTEEECTTSSCEEECSSS
T ss_pred             CCCcCC-EeEcCCCCCEEeeCCCCCEECCCCCcccCCccc
Confidence            356766 8999998 7999999999999899999999998

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.34  E-value=4.1e-07  Score=69.73  Aligned_cols=61  Identities=25%  Similarity=0.488  Sum_probs=49.2

Q ss_pred             cccCCCCccCCCCCCCCcCCcccCCCCCCCCCCCCceeecCCCceeeCCCCcccCCCCCCCccCc
Q psy7854          55 DLERLKFGLEPPTSRSEVHGANHHTTENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQN  119 (153)
Q Consensus        55 ~~~~~~~~~~~~~~~~~~C~~~~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~g~~C~~i~  119 (153)
                      +.|.|..||.+.  .+..|+++|||.. +.+|.+ .|.+..++|.|.|.+||.+.+++..|.++.
T Consensus        21 y~C~C~~G~~~~--~~~~C~dideC~~-~~~C~~-~C~n~~g~~~C~C~~g~~~~~~~~~C~~~~   81 (400)
T 3p5b_L           21 YECLCPDGFQLV--AQRRCEDIDECQD-PDTCSQ-LCVNLEGGYKCQCEEGFQLDPHTKACKAVG   81 (400)
T ss_dssp             EEEECCTTEEEC--SSSCEEECCCCST-TSSCSS-CCBCCSSSCBCCCCTTCCCCTTTSSCCCST
T ss_pred             eEEECCCCCCcC--CCCcccCchhhhc-cCCCCC-ccCCCccceeeeccccccccccccceeecc
Confidence            556677777652  3678999999984 478976 899999999999999999887888887654

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=98.34  E-value=3e-07  Score=50.87  Aligned_cols=38  Identities=13%  Similarity=0.246  Sum_probs=29.4

Q ss_pred             CCC-ccCccccCCCCCCCC-Ceee-----ecCCCcEEecCCCCCccc
Q psy7854         113 KLC-SDQNECLMDVMICSG-GTCK-----NTPGSFQSNFQDSSPILK  152 (153)
Q Consensus       113 ~~C-~~i~~C~~~~~~C~~-~~C~-----~~~g~~~C~C~~g~~~~~  152 (153)
                      ..| .++|||  ..++|.| ++|.     +..++|.|.|++||.+.+
T Consensus         2 ~~c~~~~~eC--~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~   46 (55)
T 3u7u_G            2 TSHLVKCAEK--EKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDR   46 (55)
T ss_dssp             -CCEEECCST--TTTTSCTTCEEEEECCC--CCCEEEEECTTEESTT
T ss_pred             CCCcccCCCC--cCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCC
Confidence            355 489999  7899998 9994     567889999999998653

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1

Probab=98.28  E-value=5.4e-07  Score=49.35  Aligned_cols=34  Identities=21%  Similarity=0.425  Sum_probs=28.5

Q ss_pred             ccCccccCC--------CCCCCCCeeeecCCCcEEecCCCCCc
Q psy7854         116 SDQNECLMD--------VMICSGGTCKNTPGSFQSNFQDSSPI  150 (153)
Q Consensus       116 ~~i~~C~~~--------~~~C~~~~C~~~~g~~~C~C~~g~~~  150 (153)
                      +|||||...        .++|. +.|+|++|+|+|.|++||.+
T Consensus         2 ~DidEC~~~~~~~~~~~~~~C~-~~C~n~~Gsy~C~C~~Gy~~   43 (53)
T 1apq_A            2 VDLDECASRSKSGEEDPQPQCQ-HLCHNYVGGYFCSCRPGYEL   43 (53)
T ss_dssp             CSCCTTTCSTTTCCCSSSCTTS-SEEEEETTEEEEECSTTCEE
T ss_pred             CccccccCcccccccccCCCCC-CEeECCCCCeEEECCCCCeE
Confidence            478999643        36787 79999999999999999964

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=98.26  E-value=1.2e-07  Score=53.57  Aligned_cols=47  Identities=21%  Similarity=0.513  Sum_probs=37.0

Q ss_pred             CcCCcccCCCCCCCCCCC---CceeecCCCceeeCCCCcccCCCCCCCccCcccc
Q psy7854          71 EVHGANHHTTENPGICTN---GACENLMGTYRCICNPGYEGDPTGKLCSDQNECL  122 (153)
Q Consensus        71 ~~C~~~~~C~~~~~~C~~---~~C~~~~g~~~C~C~~g~~~~~~g~~C~~i~~C~  122 (153)
                      ..++++|+|..  .||.+   ++|.+..++|.|.|++||..   |..|++.++|.
T Consensus         6 ~~~~~~d~C~s--nPC~nga~gtC~~~~g~y~C~C~~Gy~~---G~~C~~~~~C~   55 (61)
T 2k2s_B            6 QLSETPAACSS--NPCGPEAAGTCKETNSGYICRCNQGYRI---SLDGTGNVTCI   55 (61)
T ss_dssp             -CTTSCCHHHH--CSSCSSSCCEEEECSSEEEEECCTTEEE---EECSSSCEEEE
T ss_pred             hhcCCCCcCcC--CCCcCCCccccccCCCceEeECCCCCcc---CCCCCCCCEec
Confidence            35777899986  88975   48999999999999999940   56787766674

>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*

Probab=98.26  E-value=7.3e-07  Score=50.06  Aligned_cols=48  Identities=23%  Similarity=0.499  Sum_probs=37.7

Q ss_pred             CCCCCCCceeecC-CCceeeCCCCcccCCCCCCCccCccccCCCCCCCCCeeeecC
Q psy7854          83 PGICTNGACENLM-GTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSGGTCKNTP  137 (153)
Q Consensus        83 ~~~C~~~~C~~~~-g~~~C~C~~g~~~~~~g~~C~~i~~C~~~~~~C~~~~C~~~~  137 (153)
                      .+.|.+ .|.+++ ++|.|.|++||.+.++++.|.+++     ..+|. ..|+|..
T Consensus         6 nggC~~-~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d~~-----~~pC~-~~c~n~~   54 (59)
T 2wph_E            6 NGRCEQ-FCKNSADNKVVCSCTEGYRLAENQKSCEPAV-----PFPCG-RVSVSQT   54 (59)
T ss_dssp             GGGCSS-EEEECSTTCEEEECCTTEEECTTSSCEEESS-----SSCTT-CCCSCCC
T ss_pred             CCCcCC-EeEeCCCCCEEeeCCCCcEECCCCCcccCCC-----CCCCC-Ccccccc
Confidence            356766 899999 699999999999998999999874     34565 5566543

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=98.22  E-value=1.5e-06  Score=44.43  Aligned_cols=36  Identities=31%  Similarity=0.841  Sum_probs=29.7

Q ss_pred             cccCCCCCCCCCCC-CceeecCCCceeeCCCCcccCCCCCCCc
Q psy7854          75 ANHHTTENPGICTN-GACENLMGTYRCICNPGYEGDPTGKLCS  116 (153)
Q Consensus        75 ~~~~C~~~~~~C~~-~~C~~~~g~~~C~C~~g~~~~~~g~~C~  116 (153)
                      ++|+|..  .+|.+ +.|.+..++|.|.|++||    .|..|+
T Consensus         2 d~d~C~~--~pC~ngg~C~~~~~~~~C~C~~G~----~G~~Ce   38 (39)
T 1edm_B            2 DGDQCES--NPCLNGGSCKDDINSYECWCPFGF----EGKNCE   38 (39)
T ss_dssp             CCCTTTT--CCCCTTCEEEEETTEEEEECCTTC----CSTTSC
T ss_pred             ccccCCC--CCCCCCCEeEcCCCceEeECCCCC----cCCccC
Confidence            5788976  89975 599999999999999999    555553

>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}

Probab=98.16  E-value=1.3e-06  Score=50.94  Aligned_cols=28  Identities=39%  Similarity=0.614  Sum_probs=24.7

Q ss_pred             ccCccccCCCCCCCC-CeeeecCCCcEEe
Q psy7854         116 SDQNECLMDVMICSG-GTCKNTPGSFQSN  143 (153)
Q Consensus       116 ~~i~~C~~~~~~C~~-~~C~~~~g~~~C~  143 (153)
                      +|||||....+.|.+ +.|+|++|+|+|.
T Consensus         1 ~DidEC~~~~~~C~~~~~C~Nt~Gsy~C~   29 (71)
T 2kl7_A            1 SDVNECLTIPEACKGEMKCINHYGGYLCL   29 (71)
T ss_dssp             CCSCCTTCCCCSCTTEEEEEETTCCEEEE
T ss_pred             CccccccCCCCCCCCCCEeECCCCCeEec
Confidence            379999877789985 8999999999999

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=98.12  E-value=1.7e-06  Score=47.74  Aligned_cols=39  Identities=28%  Similarity=0.629  Sum_probs=30.3

Q ss_pred             cC-CcccCCCCCCCCCCCC-cee-----ecCCCceeeCCCCcccCCCCCCCc
Q psy7854          72 VH-GANHHTTENPGICTNG-ACE-----NLMGTYRCICNPGYEGDPTGKLCS  116 (153)
Q Consensus        72 ~C-~~~~~C~~~~~~C~~~-~C~-----~~~g~~~C~C~~g~~~~~~g~~C~  116 (153)
                      .| .++|||..  .||.|+ +|.     +..++|.|.|++||    .|..|+
T Consensus         3 ~c~~~~~eC~s--~pC~NgGtC~~~~~~d~~~~y~C~C~~g~----~G~~CE   48 (55)
T 3u7u_G            3 SHLVKCAEKEK--TFCVNGGECFMVKDLSNPSRYLCKCPNEF----TGDRCQ   48 (55)
T ss_dssp             CCEEECCSTTT--TTSCTTCEEEEECCC--CCCEEEEECTTE----ESTTSC
T ss_pred             CCcccCCCCcC--CCCCCCCCcCCCCccCCCCCEeEeCCCCC----cCCCcC
Confidence            35 46899987  899865 994     55789999999999    677885

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=98.09  E-value=4.2e-06  Score=51.09  Aligned_cols=54  Identities=24%  Similarity=0.545  Sum_probs=41.5

Q ss_pred             ecccCCCCccCCCCCCCCcCC--cccCCCCCCCCCCC-CceeecC--CCceeeCCCCcccCCCCCCCc-cCcc
Q psy7854          54 QDLERLKFGLEPPTSRSEVHG--ANHHTTENPGICTN-GACENLM--GTYRCICNPGYEGDPTGKLCS-DQNE  120 (153)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~~C~--~~~~C~~~~~~C~~-~~C~~~~--g~~~C~C~~g~~~~~~g~~C~-~i~~  120 (153)
                      .+.|.|..+|.       .|+  ++++|..  .+|.+ +.|++..  ++|.|.|++||    .|..|+ +++|
T Consensus        31 ~y~C~C~~G~~-------~C~~~~~~~C~~--~pC~ngg~C~~~~~~~~~~C~C~~G~----~G~~Ce~~ide   90 (91)
T 1tpg_A           31 VEYCWCNSGRA-------QCHSVPVKSCSE--PRCFNGGTCQQALYFSDFVCQCPEGF----AGKSCEIDTRA   90 (91)
T ss_dssp             EEEEECSSSCC-------BCCEECEEECSS--CCSCTTCEEEEESSSSCEEEECCTTC----BSSSCCBCSSC
T ss_pred             CcEeECCCCCc-------ccccCcCCcccC--CCCCCCCEeecCCCCCCeEeECCCCC----cCCcCCcCCCC
Confidence            34555655552       686  7899987  78975 5999987  99999999999    677885 7765

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=98.07  E-value=4e-06  Score=45.94  Aligned_cols=36  Identities=17%  Similarity=0.217  Sum_probs=28.6

Q ss_pred             cCccccCC-CCCCCC-Ceee--ecCCCcEEecCCCCCccc
Q psy7854         117 DQNECLMD-VMICSG-GTCK--NTPGSFQSNFQDSSPILK  152 (153)
Q Consensus       117 ~i~~C~~~-~~~C~~-~~C~--~~~g~~~C~C~~g~~~~~  152 (153)
                      +|++|... .++|.| ++|+  +..++|.|.|++||.+.+
T Consensus         2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~   41 (53)
T 1egf_A            2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDR   41 (53)
T ss_dssp             EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSSS
T ss_pred             CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCCc
Confidence            57888531 248987 8999  788999999999998653

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A

Probab=98.06  E-value=4.4e-07  Score=66.22  Aligned_cols=46  Identities=22%  Similarity=0.580  Sum_probs=36.6

Q ss_pred             CcccCCCCCCCCCC-CCceeecCCCceeeCCCCcccCCCCCCCccCccc
Q psy7854          74 GANHHTTENPGICT-NGACENLMGTYRCICNPGYEGDPTGKLCSDQNEC  121 (153)
Q Consensus        74 ~~~~~C~~~~~~C~-~~~C~~~~g~~~C~C~~g~~~~~~g~~C~~i~~C  121 (153)
                      +|+|||....+.|. ++.|.|+.|+|.|.|++||.+  +|..|.++++.
T Consensus         3 ~DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~G--nG~~C~d~d~P   49 (285)
T 1gl4_A            3 LAQQTCANNRHQCSVHAECRDYATGFCCRCVANYTG--NGRQCVAEGSP   49 (285)
T ss_dssp             ----CHHHHGGGSCTTEEEEECSSCEEEEECTTEEE--CSSSEEETTCE
T ss_pred             ccchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCC--CCCcCCCCCCC
Confidence            57899986668895 679999999999999999987  78899988764

>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}

Probab=98.06  E-value=3.4e-06  Score=49.09  Aligned_cols=42  Identities=21%  Similarity=0.349  Sum_probs=31.9

Q ss_pred             CcccCCCCCCCCCC-CCceeecCCCceee-CCCCcccCCCCCCC
Q psy7854          74 GANHHTTENPGICT-NGACENLMGTYRCI-CNPGYEGDPTGKLC  115 (153)
Q Consensus        74 ~~~~~C~~~~~~C~-~~~C~~~~g~~~C~-C~~g~~~~~~g~~C  115 (153)
                      +|||||....++|. ++.|+|+.++|+|. +..||.+...+..+
T Consensus         1 ~DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~~~~~~~   44 (71)
T 2kl7_A            1 SDVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVINDLHGEGP   44 (71)
T ss_dssp             CCSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCSCCSCSSC
T ss_pred             CccccccCCCCCCCCCCEeECCCCCeEecccCCcccccccCCcc
Confidence            36899987778895 45899999999997 55688776555433

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=98.04  E-value=9.7e-06  Score=66.38  Aligned_cols=61  Identities=25%  Similarity=0.488  Sum_probs=48.8

Q ss_pred             cccCCCCccCCCCCCCCcCCcccCCCCCCCCCCCCceeecCCCceeeCCCCcccCCCCCCCccCc
Q psy7854          55 DLERLKFGLEPPTSRSEVHGANHHTTENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQN  119 (153)
Q Consensus        55 ~~~~~~~~~~~~~~~~~~C~~~~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~g~~C~~i~  119 (153)
                      +.|.|..||.+.  .+..|+++|||.. ..+|.+ .|.|+.++|.|.|.+||.+.++++.|.++.
T Consensus       315 ~~C~C~~G~~~~--~~~~C~dideC~~-~~~C~~-~C~n~~g~y~C~C~~G~~~~~~~~~C~~~~  375 (699)
T 1n7d_A          315 YECLCPDGFQLV--AQRRCEDIDECQD-PDTCSQ-LCVNLEGGYKCQCEEGFQLDPHTKACKAVG  375 (699)
T ss_dssp             CCCCCCSSSCCC--SSSCCCCCCCCSS-SSSCTT-TCCBCSSCBCCCCCSSCBCCSSCCCCBCCS
T ss_pred             cEEeCCCCeEcC--CCCcccCccccCC-CCcccc-ccccCCCCeeeeeecccccCCCCCcccccc
Confidence            556676776652  3678999999974 368975 899999999999999999987888887654

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=97.97  E-value=1.4e-06  Score=49.15  Aligned_cols=34  Identities=24%  Similarity=0.485  Sum_probs=29.7

Q ss_pred             CCccCccccCCCCCCCC---CeeeecCCCcEEecCCCCC
Q psy7854         114 LCSDQNECLMDVMICSG---GTCKNTPGSFQSNFQDSSP  149 (153)
Q Consensus       114 ~C~~i~~C~~~~~~C~~---~~C~~~~g~~~C~C~~g~~  149 (153)
                      .++++|+|  ..++|.+   ++|+++.++|.|.|++||.
T Consensus         7 ~~~~~d~C--~snPC~nga~gtC~~~~g~y~C~C~~Gy~   43 (61)
T 2k2s_B            7 LSETPAAC--SSNPCGPEAAGTCKETNSGYICRCNQGYR   43 (61)
T ss_dssp             CTTSCCHH--HHCSSCSSSCCEEEECSSEEEEECCTTEE
T ss_pred             hcCCCCcC--cCCCCcCCCccccccCCCceEeECCCCCc
Confidence            56788999  4688985   4999999999999999997

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=97.90  E-value=4.6e-06  Score=69.17  Aligned_cols=63  Identities=24%  Similarity=0.470  Sum_probs=50.2

Q ss_pred             cccCCCCccCCCCCCCCcCCcccCCCCCCCCCCCCceeecCCCceeeCCCCcccCCCCCCCccCccc
Q psy7854          55 DLERLKFGLEPPTSRSEVHGANHHTTENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNEC  121 (153)
Q Consensus        55 ~~~~~~~~~~~~~~~~~~C~~~~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~g~~C~~i~~C  121 (153)
                      +.|.|..||.+  ..+..|+++|||. .+.+|.+ .|.|..++|.|.|.+||.+.++++.|.+++++
T Consensus       333 y~C~C~~Gy~l--~~g~~C~dideC~-~~~~C~~-~C~n~~gsy~C~C~~Gy~l~~~~~~C~~~~~~  395 (791)
T 3m0c_C          333 YECLCPDGFQL--VAQRRCEDIDECQ-DPDTCSQ-LCVNLEGGYKCQCEEGFQLDPHTKACKAVGSI  395 (791)
T ss_dssp             EEEECCTTCEE--ETTTEEECCCCCS-SSSSCTT-TCCBCSSCBCCCCCSSEECCSSCCCCEETTSC
T ss_pred             cccCCCCCCcc--CCCCccccCcccC-CCCCCCC-eeecCCCCceeecCCCCEeCCCCceeeecccc
Confidence            44555556544  2367899999998 3467865 89999999999999999998888999888765

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=97.89  E-value=1.2e-07  Score=68.76  Aligned_cols=75  Identities=9%  Similarity=-0.030  Sum_probs=53.1

Q ss_pred             CCcCCcccCCCCCCCCCCC-CceeecCCCceeeCCCCcccCCCCCCCc-cCcccc------C------------------
Q psy7854          70 SEVHGANHHTTENPGICTN-GACENLMGTYRCICNPGYEGDPTGKLCS-DQNECL------M------------------  123 (153)
Q Consensus        70 ~~~C~~~~~C~~~~~~C~~-~~C~~~~g~~~C~C~~g~~~~~~g~~C~-~i~~C~------~------------------  123 (153)
                      +..|++.++|..  .||.+ ++|++...+|+|.|+.||.+    ..|+ ++++|.      .                  
T Consensus        93 G~~c~~~~eC~s--~pC~ngG~C~~~~~sy~C~C~~Gf~G----~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~  166 (267)
T 4fbr_A           93 GARDKQNIVAVS--IKSNDGGKTLTGTTTYNGEGPIGFKS----EVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQN  166 (267)
T ss_dssp             CCCSSCCEEEEE--EECSSTTSEEEEEEEETTSCCEEEEE----EECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTSC
T ss_pred             cCccccccccCC--CCCCCCCEEecCCccEEeeCCCCccc----cCCCCCcccccccCCcCCccccCCcceecccccccc
Confidence            345666667766  67864 59999999999999999955    3332 222210      0                  


Q ss_pred             ---CCCCCCC-CeeeecCCCcEEecCCCCCc
Q psy7854         124 ---DVMICSG-GTCKNTPGSFQSNFQDSSPI  150 (153)
Q Consensus       124 ---~~~~C~~-~~C~~~~g~~~C~C~~g~~~  150 (153)
                         ...+|.+ ++|++..++|+|.|++||.+
T Consensus       167 i~c~~~~c~ngg~C~dg~~~y~C~Cp~Gf~G  197 (267)
T 4fbr_A          167 VINVDAKSNDGGKTLSGTMTYNGEGPIGFRG  197 (267)
T ss_dssp             EEEEEEECSSTTSEEEEEEEETTSCCEEEEE
T ss_pred             cccCCCCCCCCCEeeCCCCCeEEeCCCCccc
Confidence               2345765 89999999999999999964

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...

Probab=97.87  E-value=3.6e-06  Score=46.47  Aligned_cols=31  Identities=16%  Similarity=0.315  Sum_probs=26.2

Q ss_pred             ccccCCCCCCCCCeeeecCCCcEEecCCCCCc
Q psy7854         119 NECLMDVMICSGGTCKNTPGSFQSNFQDSSPI  150 (153)
Q Consensus       119 ~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~  150 (153)
                      |||....+.|. +.|+|++|+|+|.|++||.+
T Consensus         2 dEC~~~~~~C~-~~C~nt~Gsy~C~C~~Gy~L   32 (55)
T 2jkh_L            2 KLCSLDNGDCD-QFCHEEQNSVVCSCARGYTL   32 (55)
T ss_dssp             CCTTTGGGGCS-SEEEEETTEEEEECCTTEEE
T ss_pred             ccccCCCCCcC-cEeEcCCCCeEEeCCCCCEE
Confidence            67865567787 79999999999999999963

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=97.87  E-value=1e-05  Score=42.97  Aligned_cols=36  Identities=11%  Similarity=0.106  Sum_probs=27.4

Q ss_pred             cCccccC-CCCCCCCCeeeecC--CCcEEecCCCCCccc
Q psy7854         117 DQNECLM-DVMICSGGTCKNTP--GSFQSNFQDSSPILK  152 (153)
Q Consensus       117 ~i~~C~~-~~~~C~~~~C~~~~--g~~~C~C~~g~~~~~  152 (153)
                      ++++|.. ..++|.|++|+...  ++|.|.|++||.+.+
T Consensus         2 ~i~~C~~~~~~pC~nG~C~~~~~~~~~~C~C~~GytG~~   40 (46)
T 1k36_A            2 SITKCSSDMNGYCLHGQCIYLVDMSQNYCRCEVGYTGVR   40 (46)
T ss_dssp             CEECCCTTCCSSCSSEEEEEETTTTEEEEEECTTCSSTT
T ss_pred             ccccCCCCCCCCCCCCEeeccCCCCCEEEECCCCCccCC
Confidence            4677832 12889888998754  689999999998764

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=97.84  E-value=2e-05  Score=43.10  Aligned_cols=38  Identities=32%  Similarity=0.807  Sum_probs=30.2

Q ss_pred             cccCCCCC-CCCCCC-Ccee--ecCCCceeeCCCCcccCCCCCCCc
Q psy7854          75 ANHHTTEN-PGICTN-GACE--NLMGTYRCICNPGYEGDPTGKLCS  116 (153)
Q Consensus        75 ~~~~C~~~-~~~C~~-~~C~--~~~g~~~C~C~~g~~~~~~g~~C~  116 (153)
                      ++++|... ..+|.+ ++|.  +..++|.|.|++||    .|..|+
T Consensus         2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~----~G~~Ce   43 (53)
T 1egf_A            2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGY----SGDRCQ   43 (53)
T ss_dssp             EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTC----CSSSSC
T ss_pred             CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCC----cCCcCC
Confidence            57888762 238976 5999  78899999999999    677885

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=97.80  E-value=3e-05  Score=63.31  Aligned_cols=74  Identities=22%  Similarity=0.518  Sum_probs=55.4

Q ss_pred             CCCCCCcCC-cccCCCCC-CCCCC-CCceeecCCCceeeCCCCcccCCCCCCCc---cCccccCCC-CCCCC-CeeeecC
Q psy7854          66 PTSRSEVHG-ANHHTTEN-PGICT-NGACENLMGTYRCICNPGYEGDPTGKLCS---DQNECLMDV-MICSG-GTCKNTP  137 (153)
Q Consensus        66 ~~~~~~~C~-~~~~C~~~-~~~C~-~~~C~~~~g~~~C~C~~g~~~~~~g~~C~---~i~~C~~~~-~~C~~-~~C~~~~  137 (153)
                      ++|.+..|+ ++++|... ..+|. ++.|.+    +.|.|.+||    .|..|+   ++++|.... .+|.+ +.|++  
T Consensus       514 ~Gy~G~~Ce~~~~~C~~~~~~~C~~~G~C~~----g~C~C~~Gy----~G~~CeC~~~~~~C~~~~g~~C~~~G~C~~--  583 (690)
T 3fcs_B          514 GKITGKYCECDDFSCVRYKGEMCSGHGQCSC----GDCLCDSDW----TGYYCNCTTRTDTCMSSNGLLCSGRGKCEC--  583 (690)
T ss_dssp             CCCBSTTSCBCSSCCCBSSSSBGGGSEEEET----TEEEECTTE----ESSSSCEECCCTTTBCTTSSBTSSSCEEET--
T ss_pred             CCeeCCCcCcccCcCcCCCCCCCCCCCEecC----CeeECcCCC----cCCCCccCCCCCcccCCCCCCCCCCCEEeC--
Confidence            677788896 67788742 23684 668976    899999999    667886   678896322 67985 89965  


Q ss_pred             CCcEEec-CCCCCcc
Q psy7854         138 GSFQSNF-QDSSPIL  151 (153)
Q Consensus       138 g~~~C~C-~~g~~~~  151 (153)
                        ..|.| ++||.+.
T Consensus       584 --g~C~C~~~Gy~G~  596 (690)
T 3fcs_B          584 --GSCVCIQPGSYGD  596 (690)
T ss_dssp             --TEEECCSTTCBST
T ss_pred             --CEEECCCCCccCC
Confidence              28999 9999764

>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4

Probab=97.79  E-value=6.1e-05  Score=46.47  Aligned_cols=63  Identities=21%  Similarity=0.366  Sum_probs=52.4

Q ss_pred             CC-CCCceee-cCCCceeeCCCCcccCCCCCCCccCcc-ccCCCCCCC-CCeeeecC-CCcEEecCCCCC
Q psy7854          85 IC-TNGACEN-LMGTYRCICNPGYEGDPTGKLCSDQNE-CLMDVMICS-GGTCKNTP-GSFQSNFQDSSP  149 (153)
Q Consensus        85 ~C-~~~~C~~-~~g~~~C~C~~g~~~~~~g~~C~~i~~-C~~~~~~C~-~~~C~~~~-g~~~C~C~~g~~  149 (153)
                      .| .++.|.. ..+...|+|..||..  ++..|..+++ |....+.|. ++.|..+. ....|.|.++|+
T Consensus        17 ~Cp~NA~C~r~~~G~e~CrCl~gY~~--dg~~Cv~~Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~   84 (105)
T 1n1i_A           17 NVPENAACYRYLDGTEEWRCLLGFKE--VGGKCVPASITCEENNGGCAPEAECTMDDKKEVECKCTKEGS   84 (105)
T ss_dssp             CCCTTEEEEECTTSCEEEEECTTEEE--CSSSEEECCCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTC
T ss_pred             CCCCCCCeEECCCCCEeEEEECCeec--cCCEEEECCcchhhcCCCcCCCcEeEECCCCEEEeECCCCCC
Confidence            45 3678988 678889999999988  7889987788 876678898 59998874 788999999975

>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*

Probab=97.77  E-value=7.4e-06  Score=47.38  Aligned_cols=34  Identities=18%  Similarity=0.365  Sum_probs=29.3

Q ss_pred             ccCccccCCCCCCCCCeeeecCC-CcEEecCCCCCc
Q psy7854         116 SDQNECLMDVMICSGGTCKNTPG-SFQSNFQDSSPI  150 (153)
Q Consensus       116 ~~i~~C~~~~~~C~~~~C~~~~g-~~~C~C~~g~~~  150 (153)
                      .|++||....+.|. ..|++++| +|.|.|++||.+
T Consensus         3 ~d~~eC~~~nggC~-h~C~n~~g~s~~C~C~~Gy~L   37 (69)
T 1kli_L            3 DDQLICVNENGGCE-QYCSDHTGTKRSCRCHEGYSL   37 (69)
T ss_dssp             SCCCCTTSGGGGCS-SEEEEETTTEEEEECCTTEEE
T ss_pred             cccccccCCCCCcC-CEeEcCCCCCEEEeCCCCCeE
Confidence            57899976667887 89999999 799999999964

>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A

Probab=97.64  E-value=5.8e-05  Score=46.25  Aligned_cols=64  Identities=19%  Similarity=0.446  Sum_probs=51.2

Q ss_pred             CCC-CCCceee-cCCCceeeCCCCcccCCCCCCCccC--ccccCCCCCCC-CCeeeecC-----CCcEEecCCCCC
Q psy7854          84 GIC-TNGACEN-LMGTYRCICNPGYEGDPTGKLCSDQ--NECLMDVMICS-GGTCKNTP-----GSFQSNFQDSSP  149 (153)
Q Consensus        84 ~~C-~~~~C~~-~~g~~~C~C~~g~~~~~~g~~C~~i--~~C~~~~~~C~-~~~C~~~~-----g~~~C~C~~g~~  149 (153)
                      ..| .++.|.+ ..+.+.|+|..||.+  ++..|..+  +.|....+.|. ++.|....     +...|.|.+||+
T Consensus        10 ~~C~~NA~C~r~~~g~e~C~C~~gy~g--dg~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~   83 (99)
T 1ob1_C           10 KQCPQNSGCFRHLDEREECKCLLNYKQ--EGDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDS   83 (99)
T ss_dssp             CCCCTTEEEECCTTSCCEEEECTTEEE--ETTEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTC
T ss_pred             CCCCCCCCeEEcCCCCEEEEecCCeec--CCCeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCc
Confidence            345 3668877 468899999999988  78889776  58976668898 49998774     678999999985

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=97.64  E-value=3.6e-05  Score=40.51  Aligned_cols=26  Identities=15%  Similarity=0.083  Sum_probs=22.2

Q ss_pred             CCCCC-Ceee--ecCCCcEEecCCCCCcc
Q psy7854         126 MICSG-GTCK--NTPGSFQSNFQDSSPIL  151 (153)
Q Consensus       126 ~~C~~-~~C~--~~~g~~~C~C~~g~~~~  151 (153)
                      ++|.| ++|+  +..++|.|.|++||.+.
T Consensus         9 ~pC~ngg~C~~~~~~~~~~C~C~~G~~G~   37 (45)
T 1a3p_A            9 GYCLNGGVXMHIESLDSYTCNCVIGYSGD   37 (45)
T ss_dssp             SCCSSSCEEEECTTTSSEEEECCTTEETT
T ss_pred             CCCCCCCEEEeecCCCCEEEEcCCCCcCC
Confidence            38987 8998  67889999999999764

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=97.63  E-value=4.5e-05  Score=40.39  Aligned_cols=38  Identities=32%  Similarity=0.716  Sum_probs=29.0

Q ss_pred             cccCCCC-CCCCCCCCceeecC--CCceeeCCCCcccCCCCCCCc
Q psy7854          75 ANHHTTE-NPGICTNGACENLM--GTYRCICNPGYEGDPTGKLCS  116 (153)
Q Consensus        75 ~~~~C~~-~~~~C~~~~C~~~~--g~~~C~C~~g~~~~~~g~~C~  116 (153)
                      ++++|.. ...||.|++|....  ++|.|.|++||    .|..|+
T Consensus         2 ~i~~C~~~~~~pC~nG~C~~~~~~~~~~C~C~~Gy----tG~~Ce   42 (46)
T 1k36_A            2 SITKCSSDMNGYCLHGQCIYLVDMSQNYCRCEVGY----TGVRCE   42 (46)
T ss_dssp             CEECCCTTCCSSCSSEEEEEETTTTEEEEEECTTC----SSTTSC
T ss_pred             ccccCCCCCCCCCCCCEeeccCCCCCEEEECCCCC----ccCCCC
Confidence            4677764 23689878998754  68999999999    667775

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=97.59  E-value=6.4e-05  Score=61.42  Aligned_cols=78  Identities=22%  Similarity=0.416  Sum_probs=55.0

Q ss_pred             ccCCCCCCCCcCCc-c--------cCCCCCC--CCCC-CCceeecCCCceeeCC----CCcccCCCCCCCc-cCccccCC
Q psy7854          62 GLEPPTSRSEVHGA-N--------HHTTENP--GICT-NGACENLMGTYRCICN----PGYEGDPTGKLCS-DQNECLMD  124 (153)
Q Consensus        62 ~~~~~~~~~~~C~~-~--------~~C~~~~--~~C~-~~~C~~~~g~~~C~C~----~g~~~~~~g~~C~-~i~~C~~~  124 (153)
                      ..+.+++.+..|+- +        ++|....  .+|. ++.|.+    +.|.|.    +||    .|..|+ ++++|...
T Consensus       460 C~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~----g~C~C~~~~~~Gy----~G~~Ce~~~~~C~~~  531 (690)
T 3fcs_B          460 CRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLC----GQCVCHSSDFGKI----TGKYCECDDFSCVRY  531 (690)
T ss_dssp             EEECTTCCSSSSCCSCC------CCCCSSSSSSCGGGGSEEECS----SSEEECCCSSCCC----BSTTSCBCSSCCCBS
T ss_pred             eEeCCCccCCceeeccCccCCccCCcCCCCCCCCCCCCCCEEEC----CeeEeecCCCCCe----eCCCcCcccCcCcCC
Confidence            44566667777842 2        5676532  3584 668873    799999    888    678896 77889521


Q ss_pred             -CCCCCC-CeeeecCCCcEEecCCCCCcc
Q psy7854         125 -VMICSG-GTCKNTPGSFQSNFQDSSPIL  151 (153)
Q Consensus       125 -~~~C~~-~~C~~~~g~~~C~C~~g~~~~  151 (153)
                       ..+|.+ +.|.+    +.|.|++||.+.
T Consensus       532 ~~~~C~~~G~C~~----g~C~C~~Gy~G~  556 (690)
T 3fcs_B          532 KGEMCSGHGQCSC----GDCLCDSDWTGY  556 (690)
T ss_dssp             SSSBGGGSEEEET----TEEEECTTEESS
T ss_pred             CCCCCCCCCEecC----CeeECcCCCcCC
Confidence             257874 89976    799999999754

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=97.57  E-value=8.8e-07  Score=64.20  Aligned_cols=38  Identities=5%  Similarity=-0.070  Sum_probs=31.9

Q ss_pred             CCCCCccCccccCCCCCCCC-CeeeecCCCcEEecCCCCCc
Q psy7854         111 TGKLCSDQNECLMDVMICSG-GTCKNTPGSFQSNFQDSSPI  150 (153)
Q Consensus       111 ~g~~C~~i~~C~~~~~~C~~-~~C~~~~g~~~C~C~~g~~~  150 (153)
                      .|..|+..++|  ...+|.+ ++|++...+|+|.|++||.+
T Consensus        92 ~G~~c~~~~eC--~s~pC~ngG~C~~~~~sy~C~C~~Gf~G  130 (267)
T 4fbr_A           92 LGARDKQNIVA--VSIKSNDGGKTLTGTTTYNGEGPIGFKS  130 (267)
T ss_dssp             CCCCSSCCEEE--EEEECSSTTSEEEEEEEETTSCCEEEEE
T ss_pred             ccCcccccccc--CCCCCCCCCEEecCCccEEeeCCCCccc
Confidence            45677777788  5688987 99999999999999999974

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=97.56  E-value=8e-05  Score=39.15  Aligned_cols=29  Identities=38%  Similarity=0.954  Sum_probs=23.5

Q ss_pred             CCCCC-Ccee--ecCCCceeeCCCCcccCCCCCCCc
Q psy7854          84 GICTN-GACE--NLMGTYRCICNPGYEGDPTGKLCS  116 (153)
Q Consensus        84 ~~C~~-~~C~--~~~g~~~C~C~~g~~~~~~g~~C~  116 (153)
                      .+|.+ ++|.  +..++|.|.|++||    .|..|+
T Consensus         9 ~pC~ngg~C~~~~~~~~~~C~C~~G~----~G~~Ce   40 (45)
T 1a3p_A            9 GYCLNGGVXMHIESLDSYTCNCVIGY----SGDRCQ   40 (45)
T ss_dssp             SCCSSSCEEEECTTTSSEEEECCTTE----ETTTTC
T ss_pred             CCCCCCCEEEeecCCCCEEEEcCCCC----cCCcCC
Confidence            38975 5898  67789999999999    567775

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=97.54  E-value=4.2e-05  Score=51.74  Aligned_cols=46  Identities=28%  Similarity=0.664  Sum_probs=37.6

Q ss_pred             cCCcccCCCCCCCC---CCCCceeecCCCceeeCCCCcccCCCCCCCccC
Q psy7854          72 VHGANHHTTENPGI---CTNGACENLMGTYRCICNPGYEGDPTGKLCSDQ  118 (153)
Q Consensus        72 ~C~~~~~C~~~~~~---C~~~~C~~~~g~~~C~C~~g~~~~~~g~~C~~i  118 (153)
                      .+.++++|......   |.+ .|.+..++|.|.|.+||.+..+++.|+++
T Consensus       120 ~~~di~eC~~~~~~~~~C~~-~C~n~~g~~~C~C~~Gy~l~~d~~~C~~~  168 (170)
T 1szb_A          120 AAEDIDECQVAPGEAPTCDH-HCHNHLGGFYCSCRAGYVLHRNKRTCSEQ  168 (170)
T ss_dssp             EEEECCTTCCCTTSCCSSSS-EEEEETTEEEEECCTTEEECTTSSCEEEC
T ss_pred             eccccCcccCCCCCCCccCC-ccccCCCCEEEeCCCCcEECCCCCccccc
Confidence            35788999875443   876 89999999999999999987778888765

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=97.53  E-value=1.4e-05  Score=62.53  Aligned_cols=71  Identities=23%  Similarity=0.508  Sum_probs=31.4

Q ss_pred             cCCCCCCCCcCCcccCCCCCCCCCCCCceeecCCCceeeCCCCcccCCCCCCCccCccccCCCCCCCC-CeeeecCCCcE
Q psy7854          63 LEPPTSRSEVHGANHHTTENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSG-GTCKNTPGSFQ  141 (153)
Q Consensus        63 ~~~~~~~~~~C~~~~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~g~~C~~i~~C~~~~~~C~~-~~C~~~~g~~~  141 (153)
                      .|..++.+..|. +++|..   +|.++.|.+   .+.|.|.+||    .|..|+ +++|.  . +|.+ +.|++.   +.
T Consensus       380 ~C~~~~~g~~c~-~~~C~~---~C~nG~C~~---~~~C~C~~G~----~G~~C~-~~~C~--~-~C~~~g~C~~~---~~  441 (463)
T 2wg3_C          380 ECRATVQPAQTL-TSECSR---LCRNGYCTP---TGKCCCSPGW----EGDFCR-TAKCE--P-ACRHGGVCVRP---NK  441 (463)
T ss_dssp             GGCCCCCCCCCC-CCHHHH---HCCSEEECT---TSCEEECTTE----ESTTSC-EECC---------------------
T ss_pred             cCCCCCcCCCCc-cccccC---CCCCCccCC---CCeECCCCCc----CCCcCC-cCcCC--C-CCCCCCEECCC---CE
Confidence            344444445565 456753   587788875   3589999999    667884 56784  3 8986 899765   69


Q ss_pred             EecCCCCCcc
Q psy7854         142 SNFQDSSPIL  151 (153)
Q Consensus       142 C~C~~g~~~~  151 (153)
                      |.|++||.+.
T Consensus       442 C~C~~G~~G~  451 (463)
T 2wg3_C          442 CLCKKGYLGP  451 (463)
T ss_dssp             ----------
T ss_pred             EECCCCcccC
Confidence            9999999754

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=97.50  E-value=3.3e-05  Score=43.72  Aligned_cols=40  Identities=30%  Similarity=0.713  Sum_probs=31.8

Q ss_pred             cCCCCCCCCCCC-Cceee-----cCCCceeeCCCCcccCCCCCCCc-cCcccc
Q psy7854          77 HHTTENPGICTN-GACEN-----LMGTYRCICNPGYEGDPTGKLCS-DQNECL  122 (153)
Q Consensus        77 ~~C~~~~~~C~~-~~C~~-----~~g~~~C~C~~g~~~~~~g~~C~-~i~~C~  122 (153)
                      |+|..  .+|.+ ++|++     ..++|.|.|++||    .|..|+ +++++.
T Consensus         7 ~~C~~--~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf----~G~~Ce~~i~~~~   53 (63)
T 1hae_A            7 AEKEK--TFCVNGGECFMVKDLSNPSRYLCKCQPGF----TGARCTENVPMKV   53 (63)
T ss_dssp             CHHHH--TTSCTTCEEEEEESSSSSCCEEEECCTTE----ESTTSCEECCSSC
T ss_pred             CCCCC--CcCCCCcEEecCCccCCCCCEEEECCCCC----cCCccCcCcCccc
Confidence            45655  78975 59986     5689999999999    678995 788874

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}

Probab=97.43  E-value=8.4e-05  Score=54.25  Aligned_cols=47  Identities=23%  Similarity=0.549  Sum_probs=39.6

Q ss_pred             cccCCCCC-CCCCCCCceeecCCCceeeCCCCcccCCCCCCCccCcccc
Q psy7854          75 ANHHTTEN-PGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNECL  122 (153)
Q Consensus        75 ~~~~C~~~-~~~C~~~~C~~~~g~~~C~C~~g~~~~~~g~~C~~i~~C~  122 (153)
                      +.|||... .+.|.+ .|.+..++|.|.|..||.+..+++.|.+.++|.
T Consensus         1 ~~~eC~~~~~~~C~~-~C~~~~~~~~C~C~~G~~l~~d~~sC~p~~~c~   48 (283)
T 3f1s_B            1 AKNECHPERTDGCQH-FCLPGQESYTCSCAQGYRLGEDHKQCVPHDQCA   48 (283)
T ss_dssp             --CCCCSSCSSSCSS-BCCCCTTSCCCBCCTTEEECTTSSCEEECSTTC
T ss_pred             CCCccCCCCCCCCCC-EeeCCCCCeEecCCCCcccCCCCCccccccccc
Confidence            36889876 678987 899999999999999999988899999887774

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=97.38  E-value=0.00013  Score=54.45  Aligned_cols=9  Identities=56%  Similarity=1.412  Sum_probs=4.7

Q ss_pred             ceeeCCCCc
Q psy7854          98 YRCICNPGY  106 (153)
Q Consensus        98 ~~C~C~~g~  106 (153)
                      +.|.|.+||
T Consensus       197 ~~C~C~~G~  205 (324)
T 2ygq_A          197 GFCICPPGF  205 (324)
T ss_dssp             CCEECCTTC
T ss_pred             CEEeCCCCc
Confidence            445555555

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=97.37  E-value=1.2e-05  Score=43.75  Aligned_cols=38  Identities=8%  Similarity=0.139  Sum_probs=28.6

Q ss_pred             ceeeCCCCcccCCCCCCCccCccccCCCCCCCC-Ceeee----cCCCcEEecCCCCCccc
Q psy7854          98 YRCICNPGYEGDPTGKLCSDQNECLMDVMICSG-GTCKN----TPGSFQSNFQDSSPILK  152 (153)
Q Consensus        98 ~~C~C~~g~~~~~~g~~C~~i~~C~~~~~~C~~-~~C~~----~~g~~~C~C~~g~~~~~  152 (153)
                      +.|.|++||.                 .++|.| ++|++    ..++|.|.|++||.+.+
T Consensus         3 ~~C~C~~g~~-----------------~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~   45 (52)
T 3ca7_A            3 PTYKCPETFD-----------------AWYCLNDAHCFAVKIADLPVYSCECAIGFMGQR   45 (52)
T ss_dssp             CCBCCCHHHH-----------------HHTSCTTCEEEEEEETTEEEEEEECCTTEESTT
T ss_pred             eeeECCCCCc-----------------CCcCCCCCEEecCccCCCCCEEEECCCCCcCCC
Confidence            4578888883                 356776 89986    35679999999997653

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=97.34  E-value=0.00025  Score=54.82  Aligned_cols=58  Identities=29%  Similarity=0.705  Sum_probs=41.9

Q ss_pred             CCC-CCceeecCCCceeeCCCCcccCCCCCCCcc-C----------ccccCCCCCCCC-CeeeecCCCcEEecCCCCCcc
Q psy7854          85 ICT-NGACENLMGTYRCICNPGYEGDPTGKLCSD-Q----------NECLMDVMICSG-GTCKNTPGSFQSNFQDSSPIL  151 (153)
Q Consensus        85 ~C~-~~~C~~~~g~~~C~C~~g~~~~~~g~~C~~-i----------~~C~~~~~~C~~-~~C~~~~g~~~C~C~~g~~~~  151 (153)
                      +|. ++.|.+  +.+.|.|++||    .|..|+. .          ++|. ..+.|.+ +.|  ..++|.|.|++||.+.
T Consensus       204 ~C~~~G~C~~--~~g~C~C~~G~----~G~~Ce~~C~~g~~g~~C~~~C~-~~~~C~~~g~C--~~~~~~C~C~~G~~G~  274 (423)
T 2gy5_A          204 ACMNNGVCHE--DTGECICPPGF----MGRTCEKACELHTFGRTCKERCS-GQEGCKSYVFC--LPDPYGCSCATGWKGL  274 (423)
T ss_dssp             CCCTTCEECT--TTCCEECCTTE----ESTTSCEECCTTEESTTSCEECC-STTTTTTCCEE--ETTTTEEECCBTCBSG
T ss_pred             CCCCCCEEEC--CCCcEeCCCCc----cCCCcccccCCCCCCCCcCccCC-CCCCCCCCCEE--CCCCCeEEeCCCcccc
Confidence            675 568876  57899999999    5667763 2          2453 3466775 778  3678999999999764

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=97.28  E-value=7.1e-05  Score=42.30  Aligned_cols=32  Identities=19%  Similarity=0.302  Sum_probs=26.0

Q ss_pred             CccccCCCCCCCC-Ceeee-----cCCCcEEecCCCCCcc
Q psy7854         118 QNECLMDVMICSG-GTCKN-----TPGSFQSNFQDSSPIL  151 (153)
Q Consensus       118 i~~C~~~~~~C~~-~~C~~-----~~g~~~C~C~~g~~~~  151 (153)
                      .++|  ..++|.| ++|++     ..++|.|.|++||.+.
T Consensus         6 c~~C--~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~   43 (63)
T 1hae_A            6 CAEK--EKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGA   43 (63)
T ss_dssp             CCHH--HHTTSCTTCEEEEEESSSSSCCEEEECCTTEEST
T ss_pred             cCCC--CCCcCCCCcEEecCCccCCCCCEEEECCCCCcCC
Confidence            3567  4678987 89986     6789999999999764

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=97.26  E-value=0.00035  Score=52.16  Aligned_cols=70  Identities=23%  Similarity=0.497  Sum_probs=24.4

Q ss_pred             CCCCCCCCcCCcccCCCCCCCCCC-CCceeecCCCceeeCCCCcccCCCCCCCccCccccCCCCCCCC-CeeeecCCCcE
Q psy7854          64 EPPTSRSEVHGANHHTTENPGICT-NGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSG-GTCKNTPGSFQ  141 (153)
Q Consensus        64 ~~~~~~~~~C~~~~~C~~~~~~C~-~~~C~~~~g~~~C~C~~g~~~~~~g~~C~~i~~C~~~~~~C~~-~~C~~~~g~~~  141 (153)
                      +++++.+..|+. +.|.   .+|. ++.|.+   .+.|.|.+||    .|..|+ +++|.   .+|.+ +.|..   .+.
T Consensus       201 C~~G~~G~~C~~-~~C~---~~C~~~G~C~~---~~~C~C~~G~----~G~~C~-~~~C~---~~C~~~g~C~~---~~~  262 (324)
T 2ygq_A          201 CPPGFYGVNCDK-ANCS---TTCFNGGTCFY---PGKCICPPGL----EGEQCE-ISKCP---QPCRNGGKCIG---KSK  262 (324)
T ss_dssp             CCTTCBTTTTCB-CCCS---SCCCSSCCBSC---SSCBCCCTTC----CTTTTC--------------------------
T ss_pred             CCCCccCCCccc-CcCC---CCCCCCCeeCC---CCeeeCCCCc----cCCCCC-cCcCC---CcCCCCCEECC---CCE
Confidence            344444444432 2342   3463 346654   4789999999    566785 46673   67875 88863   579


Q ss_pred             EecCCCCCcc
Q psy7854         142 SNFQDSSPIL  151 (153)
Q Consensus       142 C~C~~g~~~~  151 (153)
                      |.|++||.+.
T Consensus       263 C~C~~G~~G~  272 (324)
T 2ygq_A          263 CKCSKGYQGD  272 (324)
T ss_dssp             ----------
T ss_pred             EECCCCCcCC
Confidence            9999999753

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=97.26  E-value=0.00052  Score=53.05  Aligned_cols=78  Identities=18%  Similarity=0.396  Sum_probs=47.8

Q ss_pred             cCCCCCCCCcCCcc-----------cCCCCCCCCCC-CCceeecCCCceeeCCCCcccCCCCCCCccC-------ccccC
Q psy7854          63 LEPPTSRSEVHGAN-----------HHTTENPGICT-NGACENLMGTYRCICNPGYEGDPTGKLCSDQ-------NECLM  123 (153)
Q Consensus        63 ~~~~~~~~~~C~~~-----------~~C~~~~~~C~-~~~C~~~~g~~~C~C~~g~~~~~~g~~C~~i-------~~C~~  123 (153)
                      .+++++.+..|+..           ++|.. ..+|. .+.|.  .++|.|.|.+||    .|..|+..       +.|..
T Consensus       219 ~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~-~~~C~~~g~C~--~~~~~C~C~~G~----~G~~C~~~C~~G~~G~~C~~  291 (423)
T 2gy5_A          219 ICPPGFMGRTCEKACELHTFGRTCKERCSG-QEGCKSYVFCL--PDPYGCSCATGW----KGLQCNEACHPGFYGPDCKL  291 (423)
T ss_dssp             ECCTTEESTTSCEECCTTEESTTSCEECCS-TTTTTTCCEEE--TTTTEEECCBTC----BSGGGCBCCCTTBCSBTTCC
T ss_pred             eCCCCccCCCcccccCCCCCCCCcCccCCC-CCCCCCCCEEC--CCCCeEEeCCCc----ccccccCccCCCCcCCcccc
Confidence            35566666777641           23431 24564 34663  578999999999    55666541       22321


Q ss_pred             CCCCCCC-CeeeecCCCcEEecCCCCCcc
Q psy7854         124 DVMICSG-GTCKNTPGSFQSNFQDSSPIL  151 (153)
Q Consensus       124 ~~~~C~~-~~C~~~~g~~~C~C~~g~~~~  151 (153)
                       .-+|.+ +.|.+..   .|.|++||.+.
T Consensus       292 -~C~C~ngg~C~~~~---~C~C~~G~~G~  316 (423)
T 2gy5_A          292 -RCSCNNGEMCDRFQ---GCLCSPGWQGL  316 (423)
T ss_dssp             -BCCCTTCCEEETTT---EEECCTTCBST
T ss_pred             -cccCCCCCEecCCC---ceECCCCCcCC
Confidence             125665 7997664   49999999764

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=97.21  E-value=0.00013  Score=54.68  Aligned_cols=42  Identities=29%  Similarity=0.777  Sum_probs=27.5

Q ss_pred             ccCCCCCCCCCCCCceeecCCCceeeCCCCcccCCCCCCCccCc
Q psy7854          76 NHHTTENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQN  119 (153)
Q Consensus        76 ~~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~g~~C~~i~  119 (153)
                      +|||. ..+.|.+ .|.+..++|.|.|.+||.+.++++.|...+
T Consensus         1 i~ec~-~~~~C~~-~C~n~~g~~~C~C~~g~~l~~d~~~C~~~~   42 (349)
T 3v64_C            1 VNECA-EEGYCSQ-GCTNSEGAFQCWCEAGYELRPDRRSCKALG   42 (349)
T ss_dssp             ---------CCSS-EECCC---CCEECCTTEEECTTSSCEEESS
T ss_pred             CcccC-CCCCCcC-eeecCCCCeEEECCCCccCCCCCCcccccc
Confidence            47887 4578977 899999999999999999988888997654

>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1

Probab=97.13  E-value=7.4e-05  Score=40.43  Aligned_cols=26  Identities=12%  Similarity=0.252  Sum_probs=21.8

Q ss_pred             CCCCCCCCeeeecCCCcEEecCCCCCc
Q psy7854         124 DVMICSGGTCKNTPGSFQSNFQDSSPI  150 (153)
Q Consensus       124 ~~~~C~~~~C~~~~g~~~C~C~~g~~~  150 (153)
                      ..+.|. +.|+|++|+|+|.|++||.+
T Consensus         4 ~ng~C~-~~C~n~~gs~~C~C~~Gy~L   29 (51)
T 1kig_L            4 DNGGCD-QFCREERSEVRCSCAHGYVL   29 (51)
T ss_dssp             TTTSSS-SCCCEETTEECCCCCTTEEE
T ss_pred             CCCCcC-CEeEcCCCCeEEeCCCCcEE
Confidence            456676 68999999999999999964

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=96.86  E-value=0.00044  Score=46.75  Aligned_cols=49  Identities=24%  Similarity=0.533  Sum_probs=37.7

Q ss_pred             cCCCCCCCCcCC-cccCCCCCCCCCC-CCceeec-CCCceeeCCCCcccCCCCCCCc
Q psy7854          63 LEPPTSRSEVHG-ANHHTTENPGICT-NGACENL-MGTYRCICNPGYEGDPTGKLCS  116 (153)
Q Consensus        63 ~~~~~~~~~~C~-~~~~C~~~~~~C~-~~~C~~~-~g~~~C~C~~g~~~~~~g~~C~  116 (153)
                      .++++|.+..|+ ++++|.. ..+|. ++.|++. .++|.|.|++||    .|..|+
T Consensus       117 ~C~~G~~G~~C~~~~~~C~~-~~~C~~~g~C~~~~~~~~~C~C~~G~----~G~~Ce  168 (169)
T 2vj2_A          117 LCETNWGGQLCDKDLNYCGT-HQPCLNGGTCSNTGPDKYQCSCPEGY----SGPNCE  168 (169)
T ss_dssp             EECTTEETTTTCEESCHHHH-TCCCCTTCEEEECSTTCEEEECCTTC----CSTTSC
T ss_pred             eCCCCCCCCcccCCCCCCCC-CCCCCCCCEEcCCCCCCcEeECCCCC----cCcCcC
Confidence            356666778897 8899974 36896 5699996 899999999999    555553

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=96.81  E-value=0.00047  Score=45.94  Aligned_cols=44  Identities=25%  Similarity=0.624  Sum_probs=34.2

Q ss_pred             cCCcccCCCCCCCCCC-CCceeecCCCceeeCCCCcccCCCCCCCccCcccc
Q psy7854          72 VHGANHHTTENPGICT-NGACENLMGTYRCICNPGYEGDPTGKLCSDQNECL  122 (153)
Q Consensus        72 ~C~~~~~C~~~~~~C~-~~~C~~~~g~~~C~C~~g~~~~~~g~~C~~i~~C~  122 (153)
                      .|+ .++|..  .+|. .+.|.+..++|.|.|++||    .|..|+.+++|.
T Consensus       116 ICe-~~~c~~--~~C~~~g~C~~~~~~~~c~C~~g~----~G~~Ce~~~~c~  160 (162)
T 1g1s_A          116 LCY-TASCQD--MSCSKQGECLETIGNYTCSCYPGF----YGPECEYVRDDD  160 (162)
T ss_dssp             EEE-ECCCCT--TGGGGSEEEEECSSSEEEEECTTE----ESTTSCEECC--
T ss_pred             EEE-eCCCcC--CCCCCCCEEecCCCCceEeCCCCC----cCcccccCcccC
Confidence            454 456765  7886 4699999999999999999    677899988984

>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=96.79  E-value=0.00068  Score=45.05  Aligned_cols=45  Identities=29%  Similarity=0.517  Sum_probs=35.2

Q ss_pred             cCCcccCCCCC-CCCCCCCceeecCCCceeeCCCCcccCCCCCCCcc
Q psy7854          72 VHGANHHTTEN-PGICTNGACENLMGTYRCICNPGYEGDPTGKLCSD  117 (153)
Q Consensus        72 ~C~~~~~C~~~-~~~C~~~~C~~~~g~~~C~C~~g~~~~~~g~~C~~  117 (153)
                      .+.++++|... ...|.+ .|.+..++|.|.|.+||.+..+++.|++
T Consensus       113 ~~~d~~eC~~~~~~~C~~-~C~n~~g~~~C~C~~Gy~l~~~~~~C~~  158 (159)
T 1nzi_A          113 VATDINECTDFVDVPCSH-FCNNFIGGYFCSCPPEYFLHDDMKNCGV  158 (159)
T ss_dssp             EEEECCTTTC-CCCCSSS-EEEEETTEEEEECCTTCEECTTSSCEEC
T ss_pred             ecccCcccCCCCCCCCCC-cccCcCCCEEEecCCCcEECCCCCcccc
Confidence            45678999753 246765 8999999999999999998777777754

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=96.76  E-value=0.00042  Score=37.72  Aligned_cols=28  Identities=14%  Similarity=0.144  Sum_probs=22.9

Q ss_pred             CCCCCC-Ceee--ecCCCcEEecCCCCCccc
Q psy7854         125 VMICSG-GTCK--NTPGSFQSNFQDSSPILK  152 (153)
Q Consensus       125 ~~~C~~-~~C~--~~~g~~~C~C~~g~~~~~  152 (153)
                      .++|.| ++|+  +..++|.|.|++||.+.+
T Consensus        11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~   41 (53)
T 1nql_B           11 DGYCLHDGVCMYIEALDKYACNCVVGYIGER   41 (53)
T ss_dssp             CCEECTTCEEEEETTTTEEEEEECTTEESTT
T ss_pred             CCCCCCCeEEeeecCCCCEEEecCCCCcCCC
Confidence            577887 8998  567889999999998653

>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*

Probab=96.75  E-value=0.00055  Score=38.10  Aligned_cols=26  Identities=15%  Similarity=0.304  Sum_probs=21.3

Q ss_pred             CCCCCCCCeeeecC-CCcEEecCCCCCc
Q psy7854         124 DVMICSGGTCKNTP-GSFQSNFQDSSPI  150 (153)
Q Consensus       124 ~~~~C~~~~C~~~~-g~~~C~C~~g~~~  150 (153)
                      ..+.|. ..|++++ |+|.|.|++||.+
T Consensus         5 ~nggC~-~~C~n~~~gs~~C~C~~Gy~L   31 (59)
T 2wph_E            5 KNGRCE-QFCKNSADNKVVCSCTEGYRL   31 (59)
T ss_dssp             GGGGCS-SEEEECSTTCEEEECCTTEEE
T ss_pred             CCCCcC-CEeEeCCCCCEEeeCCCCcEE
Confidence            345676 7899999 6999999999964

>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*

Probab=96.67  E-value=0.00049  Score=37.43  Aligned_cols=26  Identities=12%  Similarity=0.307  Sum_probs=21.3

Q ss_pred             CCCCCCCCeeeecCC-CcEEecCCCCCc
Q psy7854         124 DVMICSGGTCKNTPG-SFQSNFQDSSPI  150 (153)
Q Consensus       124 ~~~~C~~~~C~~~~g-~~~C~C~~g~~~  150 (153)
                      ..+.|. ..|++++| +|.|.|++||.+
T Consensus         5 ~nggC~-~~C~n~~ggs~~C~C~~Gy~L   31 (53)
T 2bz6_L            5 ENGGCE-QYCSDHTGTKRSCRCHEGYSL   31 (53)
T ss_dssp             GGGGCS-SEEEEETTTEEEEECCTTEEE
T ss_pred             CCCCcC-CEeEcCCCCCEEeeCCCCCEE
Confidence            345676 78999999 799999999964

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=96.61  E-value=0.00078  Score=45.40  Aligned_cols=36  Identities=22%  Similarity=0.446  Sum_probs=29.2

Q ss_pred             CCccCccccCCCCC---CCCCeeeecCCCcEEecCCCCCc
Q psy7854         114 LCSDQNECLMDVMI---CSGGTCKNTPGSFQSNFQDSSPI  150 (153)
Q Consensus       114 ~C~~i~~C~~~~~~---C~~~~C~~~~g~~~C~C~~g~~~  150 (153)
                      .+.++++|......   |. ..|.++.|+|.|.|++||.+
T Consensus       120 ~~~di~eC~~~~~~~~~C~-~~C~n~~g~~~C~C~~Gy~l  158 (170)
T 1szb_A          120 AAEDIDECQVAPGEAPTCD-HHCHNHLGGFYCSCRAGYVL  158 (170)
T ss_dssp             EEEECCTTCCCTTSCCSSS-SEEEEETTEEEEECCTTEEE
T ss_pred             eccccCcccCCCCCCCccC-CccccCCCCEEEeCCCCcEE
Confidence            45789999754443   87 68999999999999999963

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=96.38  E-value=0.0017  Score=51.45  Aligned_cols=51  Identities=25%  Similarity=0.324  Sum_probs=12.7

Q ss_pred             CCceeeCCCCcccCCCCCCCc-----------cCccccCCCCCCCC-Ceeeec--CCCcEEecCCCCCccc
Q psy7854          96 GTYRCICNPGYEGDPTGKLCS-----------DQNECLMDVMICSG-GTCKNT--PGSFQSNFQDSSPILK  152 (153)
Q Consensus        96 g~~~C~C~~g~~~~~~g~~C~-----------~i~~C~~~~~~C~~-~~C~~~--~g~~~C~C~~g~~~~~  152 (153)
                      ..+.|.|++||    .|..|+           ++++|  .+.+|.+ +.+...  ...++|.|++||.+.+
T Consensus       458 ~tg~C~C~~g~----~G~~Ce~C~~G~~g~~~~~~~C--~~C~C~~~gs~~~~C~~~tG~C~C~~G~~G~~  522 (525)
T 4aqs_A          458 ETGYCYCKRLV----TGQRCDQCLPQHWGLSNDLDGC--RPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQ  522 (525)
T ss_dssp             TTCCBCBCTTC----CSTTTCC-------------------------------------------------
T ss_pred             CCCEEECCCCC----cCCCcccCCCCccCCCCCCCCC--cCCCCCCCCccCCccCCCCCeeECCCCCcCCC
Confidence            45679999999    566664           34566  3455654 444332  2345899999998753

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=96.27  E-value=0.0013  Score=53.76  Aligned_cols=74  Identities=22%  Similarity=0.519  Sum_probs=51.9

Q ss_pred             CCCCCCcCC-cccCCCCC-CCCCC---CCceeecCCCceeeCCCCcccCCCCCCCc---cCccccCC-CCCCCC-Ceeee
Q psy7854          66 PTSRSEVHG-ANHHTTEN-PGICT---NGACENLMGTYRCICNPGYEGDPTGKLCS---DQNECLMD-VMICSG-GTCKN  135 (153)
Q Consensus        66 ~~~~~~~C~-~~~~C~~~-~~~C~---~~~C~~~~g~~~C~C~~g~~~~~~g~~C~---~i~~C~~~-~~~C~~-~~C~~  135 (153)
                      +++.+..|+ +.+.|... ..+|.   ++.|..    ..|.|.+||    .|..|+   +++.|... ..+|.+ +.|..
T Consensus       505 ~G~~G~~Ce~~~~~C~~~~~~~C~~~~~G~C~~----g~C~C~~G~----~G~~Cec~~~~~~C~~~~g~~Cs~~G~C~~  576 (687)
T 3k6s_B          505 KLIYGQYCECDTINCERYNGQVCGGPGRGLCFC----GKCRCHPGF----EGSACQCERTTEGCLNPRRVECSGRGRCRC  576 (687)
T ss_dssp             CCEESTTSCEESSCSCEETTEETSHHHHEEEET----TEEEECTTC----CSTTSCSCCSSCTTBCTTCSBTSSSCCBCS
T ss_pred             CCccccccccccccccCCCCcCcCCCCCCeEEC----CEEEcCCCC----cCCCCccCCCCCCCCCCCCCCCCCCCcCCC
Confidence            667788886 56677632 13574   467864    389999999    677886   46778532 247875 88966


Q ss_pred             cCCCcEEecCCCCCcc
Q psy7854         136 TPGSFQSNFQDSSPIL  151 (153)
Q Consensus       136 ~~g~~~C~C~~g~~~~  151 (153)
                          ..|.|++||.+.
T Consensus       577 ----g~C~C~~Gy~G~  588 (687)
T 3k6s_B          577 ----NVCECHSGYQLP  588 (687)
T ss_dssp             ----SCBCCSTTCCTT
T ss_pred             ----CEEECCCCCcCC
Confidence                479999999864

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=96.06  E-value=0.0021  Score=34.86  Aligned_cols=29  Identities=38%  Similarity=1.041  Sum_probs=23.7

Q ss_pred             CCCCC-Ccee--ecCCCceeeCCCCcccCCCCCCCc
Q psy7854          84 GICTN-GACE--NLMGTYRCICNPGYEGDPTGKLCS  116 (153)
Q Consensus        84 ~~C~~-~~C~--~~~g~~~C~C~~g~~~~~~g~~C~  116 (153)
                      .+|.+ ++|.  +..++|.|.|++||    .|..|+
T Consensus        12 ~pC~nGG~C~~~~~~~~~~C~C~~Gy----tG~~Ce   43 (53)
T 1nql_B           12 GYCLHDGVCMYIEALDKYACNCVVGY----IGERCQ   43 (53)
T ss_dssp             CEECTTCEEEEETTTTEEEEEECTTE----ESTTSC
T ss_pred             CCCCCCeEEeeecCCCCEEEecCCCC----cCCCCC
Confidence            68876 5898  56788999999999    667775

>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=95.73  E-value=0.0055  Score=40.55  Aligned_cols=36  Identities=25%  Similarity=0.374  Sum_probs=28.5

Q ss_pred             CCccCccccCC-CCCCCCCeeeecCCCcEEecCCCCCc
Q psy7854         114 LCSDQNECLMD-VMICSGGTCKNTPGSFQSNFQDSSPI  150 (153)
Q Consensus       114 ~C~~i~~C~~~-~~~C~~~~C~~~~g~~~C~C~~g~~~  150 (153)
                      .+.++++|... ...|. ..|.++.|+|.|.|++||.+
T Consensus       113 ~~~d~~eC~~~~~~~C~-~~C~n~~g~~~C~C~~Gy~l  149 (159)
T 1nzi_A          113 VATDINECTDFVDVPCS-HFCNNFIGGYFCSCPPEYFL  149 (159)
T ss_dssp             EEEECCTTTC-CCCCSS-SEEEEETTEEEEECCTTCEE
T ss_pred             ecccCcccCCCCCCCCC-CcccCcCCCEEEecCCCcEE
Confidence            45688999643 24676 78999999999999999974

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=95.29  E-value=0.009  Score=48.36  Aligned_cols=43  Identities=21%  Similarity=0.545  Sum_probs=36.0

Q ss_pred             cccCCCCCCCCCCCCceeecC-CCceeeCCCCcccCCCCCCCccC
Q psy7854          75 ANHHTTENPGICTNGACENLM-GTYRCICNPGYEGDPTGKLCSDQ  118 (153)
Q Consensus        75 ~~~~C~~~~~~C~~~~C~~~~-g~~~C~C~~g~~~~~~g~~C~~i  118 (153)
                      .+|+|....+.|.+ .|.+.+ ++|.|.|+.||.+.++++.|.+.
T Consensus       264 ~~n~C~~~ng~C~~-~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~  307 (628)
T 4a0p_A          264 GWNECASSNGHCSH-LCLAVPVGGFVCGCPAHYSLNADNRTCSAP  307 (628)
T ss_dssp             CCCTTTTTGGGCSS-EEEEETTTEEEEECSTTCEECTTSSCEECC
T ss_pred             cceEeccCCCCcch-hhhcCCCCCeeEEcCCCcEecccCCcCccc
Confidence            46788765567877 899998 99999999999998888888654

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=95.23  E-value=0.015  Score=42.92  Aligned_cols=43  Identities=28%  Similarity=0.511  Sum_probs=32.6

Q ss_pred             ccCCCCCCCCCCCCceeecCC--CceeeCCCCcccCCCCCCCccCc
Q psy7854          76 NHHTTENPGICTNGACENLMG--TYRCICNPGYEGDPTGKLCSDQN  119 (153)
Q Consensus        76 ~~~C~~~~~~C~~~~C~~~~g--~~~C~C~~g~~~~~~g~~C~~i~  119 (153)
                      .++|......|.+ .|...++  +|+|.|+.||.+.++++.|.|-+
T Consensus       267 ~n~C~~~ng~Cs~-~C~~~~~~~~~~C~C~~g~~l~~d~~~c~~~~  311 (318)
T 3sov_A          267 TNPCGIDNGGCSH-LCLMSPVKPFYQCACPTGVKLLENGKTCKDGN  311 (318)
T ss_dssp             CCTTTTTGGGCSS-EEEECSSTTSEEEECSTTCCBCTTSSCBCC--
T ss_pred             ccccccCCCCcce-EEecCCCCCCeEEECCCCCEECCCCCCCCCCC
Confidence            4667654456766 8988765  79999999999988898888754

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=95.22  E-value=0.0067  Score=40.21  Aligned_cols=31  Identities=26%  Similarity=0.424  Sum_probs=25.6

Q ss_pred             ccccCCCCCCCC-CeeeecCCCcEEecCCCCCcc
Q psy7854         119 NECLMDVMICSG-GTCKNTPGSFQSNFQDSSPIL  151 (153)
Q Consensus       119 ~~C~~~~~~C~~-~~C~~~~g~~~C~C~~g~~~~  151 (153)
                      ++|  ...+|.+ +.|++..++|.|.|++||.+.
T Consensus       120 ~~c--~~~~C~~~g~C~~~~~~~~c~C~~g~~G~  151 (162)
T 1g1s_A          120 ASC--QDMSCSKQGECLETIGNYTCSCYPGFYGP  151 (162)
T ss_dssp             CCC--CTTGGGGSEEEEECSSSEEEEECTTEEST
T ss_pred             CCC--cCCCCCCCCEEecCCCCceEeCCCCCcCc
Confidence            356  4677875 899999999999999999764

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=95.18  E-value=0.014  Score=42.88  Aligned_cols=41  Identities=17%  Similarity=0.341  Sum_probs=32.1

Q ss_pred             cccCCCCC---CCCCCCCceeecC------CCceeeCCCCcccCCCCCCCc
Q psy7854          75 ANHHTTEN---PGICTNGACENLM------GTYRCICNPGYEGDPTGKLCS  116 (153)
Q Consensus        75 ~~~~C~~~---~~~C~~~~C~~~~------g~~~C~C~~g~~~~~~g~~C~  116 (153)
                      ..++|...   .+.|.+ .|.+.+      ++|+|.|+.||.+.++++.|.
T Consensus       266 ~~n~C~~~~~~ng~Cs~-~C~~~p~~~~~~~~~~C~C~~g~~l~~d~~~C~  315 (316)
T 1ijq_A          266 GVNWCERTTLSNGGCQY-LCLPAPQINPHSPKFTCACPDGMLLARDMRSCL  315 (316)
T ss_dssp             CCCTTSSSSSGGGGCSS-EEEECCCCSTTCCSEEEECCTTCEECTTSSCEE
T ss_pred             ccccccccccCCCCcCc-ccCCCccccCCCCCeEeeCCCCCEECCCCCccC
Confidence            46778764   456876 899875      589999999999988887774

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=95.15  E-value=0.0092  Score=47.64  Aligned_cols=35  Identities=29%  Similarity=0.717  Sum_probs=29.7

Q ss_pred             ccCCCCCCCCCCC-Cceee-cCCCceeeCC-CCcccCCCCCCCc
Q psy7854          76 NHHTTENPGICTN-GACEN-LMGTYRCICN-PGYEGDPTGKLCS  116 (153)
Q Consensus        76 ~~~C~~~~~~C~~-~~C~~-~~g~~~C~C~-~g~~~~~~g~~C~  116 (153)
                      +|+|..  .||+| +.|.+ ..++|.|.|. +||    .|..|+
T Consensus         2 ~d~C~~--~PC~ngG~C~~~~~~~y~C~C~~~G~----~G~~Ce   39 (553)
T 1q4g_A            2 VNPCCY--YPCQHQGICVRFGLDRYQCDCTRTGY----SGPNCT   39 (553)
T ss_dssp             CCGGGG--CCCCTTCEEEEETTTEEEEECTTSSE----ETTTTC
T ss_pred             CCcCCC--CCCCCCCCcCCCCCCceEeeCCCCCc----CCCCCC
Confidence            478877  89986 49999 8899999999 999    667885

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=95.09  E-value=0.0084  Score=32.21  Aligned_cols=29  Identities=31%  Similarity=0.772  Sum_probs=22.2

Q ss_pred             CCCCC-Cceee----cCCCceeeCCCCcccCCCCCCCc
Q psy7854          84 GICTN-GACEN----LMGTYRCICNPGYEGDPTGKLCS  116 (153)
Q Consensus        84 ~~C~~-~~C~~----~~g~~~C~C~~g~~~~~~g~~C~  116 (153)
                      .+|.| ++|.+    ..++|.|.|++||    .|..|+
T Consensus        14 ~pC~NGGtC~~~~~~~~~~y~C~C~~Gf----~G~~Ce   47 (52)
T 3ca7_A           14 WYCLNDAHCFAVKIADLPVYSCECAIGF----MGQRCE   47 (52)
T ss_dssp             HTSCTTCEEEEEEETTEEEEEEECCTTE----ESTTSC
T ss_pred             CcCCCCCEEecCccCCCCCEEEECCCCC----cCCCCc
Confidence            57875 48986    3568999999999    566775

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=94.90  E-value=0.0078  Score=33.20  Aligned_cols=26  Identities=8%  Similarity=0.074  Sum_probs=20.1

Q ss_pred             CCCC-Ceeee----cCCCcEEecCCCCCccc
Q psy7854         127 ICSG-GTCKN----TPGSFQSNFQDSSPILK  152 (153)
Q Consensus       127 ~C~~-~~C~~----~~g~~~C~C~~g~~~~~  152 (153)
                      +|.| ++|+.    ..+.|.|.|++||.+.+
T Consensus        15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~   45 (58)
T 3ltf_D           15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQR   45 (58)
T ss_dssp             TSCSSCEEEEEEETTEEEEEEEECTTEESSS
T ss_pred             cCCCCCEEeCCccCCCCCEEeECCCCCccCC
Confidence            6877 89973    34568999999998654

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=94.78  E-value=0.017  Score=46.40  Aligned_cols=35  Identities=26%  Similarity=0.731  Sum_probs=28.5

Q ss_pred             ccCCCCCCCCCCCC-ceee-cCCCceeeCC-CCcccCCCCCCCc
Q psy7854          76 NHHTTENPGICTNG-ACEN-LMGTYRCICN-PGYEGDPTGKLCS  116 (153)
Q Consensus        76 ~~~C~~~~~~C~~~-~C~~-~~g~~~C~C~-~g~~~~~~g~~C~  116 (153)
                      +|+|..  +||+|+ .|.+ ..++|.|.|. +||    .|..|+
T Consensus         1 vd~C~s--~PC~ngG~C~~~~~~~y~C~C~~~G~----~G~~Ce   38 (587)
T 3nt1_A            1 ANPCCS--NPCQNRGECMSTGFDQYKCDCTRTGF----YGENCT   38 (587)
T ss_dssp             CCTTTT--CCCCTTCEEEEEETTEEEEECTTSSE----ETTTTC
T ss_pred             CCCCCC--CCCCCCCEeeCCCCCCeEEecCCCCc----cCCCCC
Confidence            478887  899864 9996 4589999999 999    677775

>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A

Probab=94.05  E-value=0.052  Score=28.90  Aligned_cols=28  Identities=14%  Similarity=0.189  Sum_probs=21.4

Q ss_pred             CCCCCCCeeee--cCCCcEEecCCCCCccc
Q psy7854         125 VMICSGGTCKN--TPGSFQSNFQDSSPILK  152 (153)
Q Consensus       125 ~~~C~~~~C~~--~~g~~~C~C~~g~~~~~  152 (153)
                      .+.|.|++|..  ....+.|.|++||.+.|
T Consensus        13 ~~yC~nG~C~~~~~~~~~~C~C~~gy~G~R   42 (50)
T 3e50_C           13 TQFCFHGTCRFLVQEDKPACVCHSGYVGAR   42 (50)
T ss_pred             cCcccCCEEeeccCCCCeEEECCCCCcccC
Confidence            46676678865  34678999999998765

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=93.95  E-value=0.019  Score=40.37  Aligned_cols=60  Identities=22%  Similarity=0.403  Sum_probs=39.9

Q ss_pred             CCCC-CCceeecCCCceeeCCCCcccC--CCCCCCc-cCccccCC-CCCCC-C--CeeeecCCCcEEecCCCCCcc
Q psy7854          84 GICT-NGACENLMGTYRCICNPGYEGD--PTGKLCS-DQNECLMD-VMICS-G--GTCKNTPGSFQSNFQDSSPIL  151 (153)
Q Consensus        84 ~~C~-~~~C~~~~g~~~C~C~~g~~~~--~~g~~C~-~i~~C~~~-~~~C~-~--~~C~~~~g~~~C~C~~g~~~~  151 (153)
                      .+|. ++.|..    ..|.|.+||.+.  ..|..|+ +++.|... ..+|. +  +.|..    ..|.|.+||.+.
T Consensus       143 ~~Csg~G~C~~----g~C~C~~gw~~~~~~~G~~Ce~~~~~C~~~~g~~C~~~~~G~C~~----g~C~C~~G~~G~  210 (217)
T 2p28_B          143 IICSGLGDCVC----GQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFC----GKCRCHPGFEGS  210 (217)
T ss_dssp             CBGGGTEEEET----TEEEECCCCSTTCCEESTTSCEESSCSCEETTEETTCTTTEEEET----TEEEECTTEEST
T ss_pred             CCCCCCCEEeC----CceECCCCCCCcccEECCCcccCCccCCCCCCCCCCCCCCcEEeC----CeeECCCCCccC
Confidence            4674 568873    479999995221  1577886 56778421 12576 4  78874    389999999754

>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A

Probab=93.76  E-value=0.06  Score=28.64  Aligned_cols=32  Identities=31%  Similarity=0.887  Sum_probs=24.6

Q ss_pred             CCCCCCceeec--CCCceeeCCCCcccCCCCCCCccCc
Q psy7854          84 GICTNGACENL--MGTYRCICNPGYEGDPTGKLCSDQN  119 (153)
Q Consensus        84 ~~C~~~~C~~~--~g~~~C~C~~g~~~~~~g~~C~~i~  119 (153)
                      +.|.|++|...  ...+.|.|.+||    .|.+|+..+
T Consensus        14 ~yC~nG~C~~~~~~~~~~C~C~~gy----~G~RCe~~d   47 (50)
T 3e50_C           14 QFCFHGTCRFLVQEDKPACVCHSGY----VGARCEHAD   47 (50)
T ss_pred             CcccCCEEeeccCCCCeEEECCCCC----cccCCCcee
Confidence            67877888754  467899999999    777876543

>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1

Probab=93.75  E-value=0.022  Score=33.37  Aligned_cols=35  Identities=17%  Similarity=0.216  Sum_probs=23.3

Q ss_pred             CccccC-CCCCCCCCeeee--cCCCcEEecCCCCCccc
Q psy7854         118 QNECLM-DVMICSGGTCKN--TPGSFQSNFQDSSPILK  152 (153)
Q Consensus       118 i~~C~~-~~~~C~~~~C~~--~~g~~~C~C~~g~~~~~  152 (153)
                      .++|.. ..+.|.|+.|+.  ..+.+.|.|++||.+.|
T Consensus        37 ~~pC~~~~~~yClnG~C~~i~~~~~~~C~C~~GYtG~R   74 (79)
T 1xdt_R           37 RDPCLRKYKDFCIHGECKYVKELRAPSCICHPGYHGER   74 (79)
T ss_dssp             --CTTTTTTTCCSSEEECCBGGGTBCCEEECTTEESTT
T ss_pred             CCCCCccccCcCCCCEeeeecCCCCeEEEcCCCccccc
Confidence            345531 247787778853  34678999999998765

>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}

Probab=93.73  E-value=0.054  Score=28.83  Aligned_cols=27  Identities=19%  Similarity=0.228  Sum_probs=21.5

Q ss_pred             CCCCCCeeee--cCCCcEEecCCCCCccc
Q psy7854         126 MICSGGTCKN--TPGSFQSNFQDSSPILK  152 (153)
Q Consensus       126 ~~C~~~~C~~--~~g~~~C~C~~g~~~~~  152 (153)
                      +.|.|++|..  ..+.+.|.|++||.+.|
T Consensus        18 ~yC~nG~C~~i~~~~~~~C~C~~gy~G~R   46 (50)
T 2rnl_A           18 NFCIHGECKYIEHLEAVTCKCQQEYFGER   46 (50)
T ss_dssp             GTCSSSEEEEETTTTEEEEECCSSCCSSS
T ss_pred             CcCCCCEEEEecCCCCeeEECCCCccccc
Confidence            6777788973  45668999999999876

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=93.66  E-value=0.023  Score=31.29  Aligned_cols=29  Identities=31%  Similarity=0.781  Sum_probs=22.0

Q ss_pred             CCCCC-ceee----cCCCceeeCCCCcccCCCCCCCcc
Q psy7854          85 ICTNG-ACEN----LMGTYRCICNPGYEGDPTGKLCSD  117 (153)
Q Consensus        85 ~C~~~-~C~~----~~g~~~C~C~~g~~~~~~g~~C~~  117 (153)
                      +|.|+ +|..    ....|.|.|++||    .|..|+.
T Consensus        15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf----~G~~Ce~   48 (58)
T 3ltf_D           15 YCLNDAHCFAVKIADLPVYSCECAIGF----MGQRCEY   48 (58)
T ss_dssp             TSCSSCEEEEEEETTEEEEEEEECTTE----ESSSSCE
T ss_pred             cCCCCCEEeCCccCCCCCEEeECCCCC----ccCCCcc
Confidence            78764 8973    3457899999999    6677764

>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1

Probab=93.64  E-value=0.033  Score=32.62  Aligned_cols=29  Identities=38%  Similarity=1.082  Sum_probs=22.3

Q ss_pred             CCCCCCceee--cCCCceeeCCCCcccCCCCCCCc
Q psy7854          84 GICTNGACEN--LMGTYRCICNPGYEGDPTGKLCS  116 (153)
Q Consensus        84 ~~C~~~~C~~--~~g~~~C~C~~g~~~~~~g~~C~  116 (153)
                      +.|.|+.|..  ..+.+.|.|.+||    .|..|+
T Consensus        46 ~yClnG~C~~i~~~~~~~C~C~~GY----tG~RCE   76 (79)
T 1xdt_R           46 DFCIHGECKYVKELRAPSCICHPGY----HGERCH   76 (79)
T ss_dssp             TCCSSEEECCBGGGTBCCEEECTTE----ESTTCC
T ss_pred             CcCCCCEeeeecCCCCeEEEcCCCc----cccccc
Confidence            6788888853  3467899999999    666775

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=93.39  E-value=0.027  Score=45.49  Aligned_cols=40  Identities=28%  Similarity=0.496  Sum_probs=32.9

Q ss_pred             ccCCCCCCCCCCCCceeecCCCceeeCCCCcccCCCCCCCc
Q psy7854          76 NHHTTENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCS  116 (153)
Q Consensus        76 ~~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~g~~C~  116 (153)
                      .++|....+.|.+ .|.+.+++|.|.|+.||.+.++++.|.
T Consensus       578 ~~~C~~~ng~C~~-~C~~~~~~~~C~C~~g~~l~~d~~~C~  617 (619)
T 3s94_A          578 SNPCAEENGGCSH-LCLYRPQGLRCACPIGFELISDMKTCI  617 (619)
T ss_dssp             CCGGGSGGGGCSS-EEEEETTEEEEECCTTCEECSSTTCEE
T ss_pred             cccCCCCCCChhH-hhccCCCCeEEECCCCCEECCCCCcCC
Confidence            5677655567876 899999999999999999887887774

>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}

Probab=93.27  E-value=0.12  Score=27.43  Aligned_cols=29  Identities=28%  Similarity=0.882  Sum_probs=22.5

Q ss_pred             CCCCCCcee--ecCCCceeeCCCCcccCCCCCCCc
Q psy7854          84 GICTNGACE--NLMGTYRCICNPGYEGDPTGKLCS  116 (153)
Q Consensus        84 ~~C~~~~C~--~~~g~~~C~C~~g~~~~~~g~~C~  116 (153)
                      ..|.|++|.  ...+.+.|.|+.||    .|.+|+
T Consensus        18 ~yC~nG~C~~i~~~~~~~C~C~~gy----~G~RCe   48 (50)
T 2rnl_A           18 NFCIHGECKYIEHLEAVTCKCQQEY----FGERCG   48 (50)
T ss_dssp             GTCSSSEEEEETTTTEEEEECCSSC----CSSSCC
T ss_pred             CcCCCCEEEEecCCCCeeEECCCCc----cccccc
Confidence            578788897  34567899999999    666764

>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A

Probab=93.11  E-value=0.13  Score=32.65  Aligned_cols=34  Identities=29%  Similarity=0.785  Sum_probs=23.9

Q ss_pred             CCCCC-ceeecC--CCc-eeeCCCCcccCCCCCCCc-cCc-ccc
Q psy7854          85 ICTNG-ACENLM--GTY-RCICNPGYEGDPTGKLCS-DQN-ECL  122 (153)
Q Consensus        85 ~C~~~-~C~~~~--g~~-~C~C~~g~~~~~~g~~C~-~i~-~C~  122 (153)
                      +|.|+ +|.+..  ..| .|.|++||    .|..|+ +++ +|.
T Consensus         2 pC~nggtC~~~~~~~~~~~C~Cp~g~----~G~~Ce~~~~~~C~   41 (122)
T 2fd6_A            2 DCLNGGTCVSNKYFSNIHWCNCPKKF----GGQHCEIDKSKTCY   41 (122)
T ss_dssp             CCCSSCEEEECTTTTTCEEEECCTTE----ESTTSCEESSCCSB
T ss_pred             CCCCcCCcCCCcccCCCCCccCCCCC----CCccccccCcCCCc
Confidence            57654 898874  556 89999999    667785 443 564

>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A

Probab=93.11  E-value=0.038  Score=29.44  Aligned_cols=28  Identities=11%  Similarity=0.167  Sum_probs=20.8

Q ss_pred             CCCCCCCeee--ecCCCcEEecCCCCCccc
Q psy7854         125 VMICSGGTCK--NTPGSFQSNFQDSSPILK  152 (153)
Q Consensus       125 ~~~C~~~~C~--~~~g~~~C~C~~g~~~~~  152 (153)
                      .+.|.|++|.  ...+.+.|.|++||.+.|
T Consensus        13 ~~yC~nG~C~~~~~~~~~~C~C~~gy~G~R   42 (50)
T 1iox_A           13 KHYCIKGRCRFVVAEQTPSCVCDEGYIGAR   42 (50)
T ss_dssp             TTSCTTCCEEEETTTTEEEECCCTTEETTT
T ss_pred             cCcccCCEEEeEcCCCCeEEECCCCcccCC
Confidence            3667667785  345668999999998765

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=92.72  E-value=0.044  Score=42.27  Aligned_cols=25  Identities=20%  Similarity=0.478  Sum_probs=0.0

Q ss_pred             CCCCCCC-CeeeecCCCcEEecCCCCCcc
Q psy7854         124 DVMICSG-GTCKNTPGSFQSNFQDSSPIL  151 (153)
Q Consensus       124 ~~~~C~~-~~C~~~~g~~~C~C~~g~~~~  151 (153)
                      ...+|.| ++|.+..   +|.|++||.+.
T Consensus       369 ~t~~C~ngg~C~~~~---~C~C~~G~~G~  394 (426)
T 3zyj_B          369 ELLHCQNGGTCHNNV---RCLCPAAYTGI  394 (426)
T ss_dssp             -----------------------------
T ss_pred             CcccCCCCCCcCCCC---CCcCCCCCcCC
Confidence            3456665 6786554   89999999864

>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A

Probab=92.67  E-value=0.076  Score=28.21  Aligned_cols=30  Identities=33%  Similarity=0.858  Sum_probs=23.0

Q ss_pred             CCCCCCcee--ecCCCceeeCCCCcccCCCCCCCcc
Q psy7854          84 GICTNGACE--NLMGTYRCICNPGYEGDPTGKLCSD  117 (153)
Q Consensus        84 ~~C~~~~C~--~~~g~~~C~C~~g~~~~~~g~~C~~  117 (153)
                      +.|.|++|.  ...+.+.|.|++||    .|.+|+-
T Consensus        14 ~yC~nG~C~~~~~~~~~~C~C~~gy----~G~RCe~   45 (50)
T 1iox_A           14 HYCIKGRCRFVVAEQTPSCVCDEGY----IGARCER   45 (50)
T ss_dssp             TSCTTCCEEEETTTTEEEECCCTTE----ETTTTCE
T ss_pred             CcccCCEEEeEcCCCCeEEECCCCc----ccCCCCe
Confidence            678778886  34567899999999    6778763

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=92.26  E-value=0.074  Score=43.54  Aligned_cols=63  Identities=21%  Similarity=0.416  Sum_probs=41.1

Q ss_pred             CccCCCCCCCCcCC---cccCCCCC-CCCCC-CCceeecCCCceeeCCCCcccCCCCCCCccCccccCCCCCCCC-Ceee
Q psy7854          61 FGLEPPTSRSEVHG---ANHHTTEN-PGICT-NGACENLMGTYRCICNPGYEGDPTGKLCSDQNECLMDVMICSG-GTCK  134 (153)
Q Consensus        61 ~~~~~~~~~~~~C~---~~~~C~~~-~~~C~-~~~C~~~~g~~~C~C~~g~~~~~~g~~C~~i~~C~~~~~~C~~-~~C~  134 (153)
                      ...+.++|.+..|+   +++.|... ..+|. ++.|..    ..|.|.+||    .|..|+.-..|   +.+|.+ +.|+
T Consensus       539 ~C~C~~G~~G~~Cec~~~~~~C~~~~g~~Cs~~G~C~~----g~C~C~~Gy----~G~~Ce~c~~C---~~~C~~~g~Cv  607 (687)
T 3k6s_B          539 KCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRC----NVCECHSGY----QLPLCQECPGC---PSPCGKYISCA  607 (687)
T ss_dssp             EEEECTTCCSTTSCSCCSSCTTBCTTCSBTSSSCCBCS----SCBCCSTTC----CTTTTCCCTTS---CCCCTTTHHHH
T ss_pred             EEEcCCCCcCCCCccCCCCCCCCCCCCCCCCCCCcCCC----CEEECCCCC----cCCCCCCCCCC---CcccCCCCCCC
Confidence            34466777777886   35677642 23684 668865    579999999    67788764456   346664 5554

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=91.80  E-value=0.071  Score=43.13  Aligned_cols=33  Identities=27%  Similarity=0.474  Sum_probs=27.7

Q ss_pred             cCccccCCCCCCCCCeeeecC-CCcEEecCCCCCc
Q psy7854         117 DQNECLMDVMICSGGTCKNTP-GSFQSNFQDSSPI  150 (153)
Q Consensus       117 ~i~~C~~~~~~C~~~~C~~~~-g~~~C~C~~g~~~  150 (153)
                      ++++|....+.|. ..|++++ ++|.|.|++||.+
T Consensus       264 ~~n~C~~~ng~C~-~~C~~~~~~~~~C~C~~g~~l  297 (628)
T 4a0p_A          264 GWNECASSNGHCS-HLCLAVPVGGFVCGCPAHYSL  297 (628)
T ss_dssp             CCCTTTTTGGGCS-SEEEEETTTEEEEECSTTCEE
T ss_pred             cceEeccCCCCcc-hhhhcCCCCCeeEEcCCCcEe
Confidence            5788976567787 8999998 9999999999964

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=90.66  E-value=0.17  Score=36.94  Aligned_cols=33  Identities=21%  Similarity=0.269  Sum_probs=25.6

Q ss_pred             cCccccCC---CCCCCCCeeeecC------CCcEEecCCCCCc
Q psy7854         117 DQNECLMD---VMICSGGTCKNTP------GSFQSNFQDSSPI  150 (153)
Q Consensus       117 ~i~~C~~~---~~~C~~~~C~~~~------g~~~C~C~~g~~~  150 (153)
                      +.++|...   .+.|. ..|++++      ++|.|.|+.||.+
T Consensus       266 ~~n~C~~~~~~ng~Cs-~~C~~~p~~~~~~~~~~C~C~~g~~l  307 (316)
T 1ijq_A          266 GVNWCERTTLSNGGCQ-YLCLPAPQINPHSPKFTCACPDGMLL  307 (316)
T ss_dssp             CCCTTSSSSSGGGGCS-SEEEECCCCSTTCCSEEEECCTTCEE
T ss_pred             ccccccccccCCCCcC-cccCCCccccCCCCCeEeeCCCCCEE
Confidence            56788654   45687 7999875      6899999999964

>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A

Probab=90.20  E-value=0.56  Score=28.13  Aligned_cols=64  Identities=17%  Similarity=0.280  Sum_probs=48.5

Q ss_pred             CCCC-CCceeecC-CCceeeCCCCcccCCCCCCCccC--ccccCCCCCCC-CCeeeecC-CCcEEecCCCCC
Q psy7854          84 GICT-NGACENLM-GTYRCICNPGYEGDPTGKLCSDQ--NECLMDVMICS-GGTCKNTP-GSFQSNFQDSSP  149 (153)
Q Consensus        84 ~~C~-~~~C~~~~-g~~~C~C~~g~~~~~~g~~C~~i--~~C~~~~~~C~-~~~C~~~~-g~~~C~C~~g~~  149 (153)
                      ..|+ ++.|.... +.-.|+|..+|..  ++..|..-  ..|....+.|. ++.|.... ....|.|...++
T Consensus        10 tkcp~NA~Cyr~~dg~EecRCllnykk--~~~kCV~~~~~~C~~NNGGCd~nA~C~~~~~~kIvC~C~~~~~   79 (95)
T 1b9w_A           10 TNVPENAACYRYLDGTEEWRCLLYFKE--DAGKCVPAPNMTCKDKNGGCAPEAECKMNDKNEIVCKCTKEGS   79 (95)
T ss_dssp             CCCCTTEEEEECTTSCEEEEECTTEEE--ETTEEEECTTCCTTTGGGGSCTTSEEEECTTSCEEEECCSTTE
T ss_pred             CCCCCCcCeEEEcCCCEEEEEECCeEe--cCCEEEcCCCCCccccCCCcCCCcceeecCCCcEEEECCCCCC
Confidence            3563 67898865 6788999999976  56678543  37876678898 49998777 678999988764

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=90.07  E-value=0.24  Score=39.91  Aligned_cols=41  Identities=27%  Similarity=0.527  Sum_probs=32.0

Q ss_pred             ccCCCCCCCCCCCCceeecC--CCceeeCCCCcccCCCCCCCcc
Q psy7854          76 NHHTTENPGICTNGACENLM--GTYRCICNPGYEGDPTGKLCSD  117 (153)
Q Consensus        76 ~~~C~~~~~~C~~~~C~~~~--g~~~C~C~~g~~~~~~g~~C~~  117 (153)
                      .++|......|.+ .|...+  .+|+|.|+.||.+.++++.|.+
T Consensus       272 ~n~C~~~ng~Cs~-lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~  314 (619)
T 3s94_A          272 TNPCGIDNGGCSH-LCLMSPVKPFYQCACPTGVKLLENGKTCKD  314 (619)
T ss_dssp             CCTTTTTGGGCSS-EEEECSSTTSEEEECCTTCCBCTTSSCBCS
T ss_pred             cccccCCCCcccc-eEECCCCCCCceEeCCchheecccCcccCC
Confidence            4667654466766 898776  4799999999999888888865

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=89.77  E-value=0.26  Score=36.18  Aligned_cols=33  Identities=27%  Similarity=0.413  Sum_probs=25.1

Q ss_pred             CccccCCCCCCCCCeeeecCC--CcEEecCCCCCcc
Q psy7854         118 QNECLMDVMICSGGTCKNTPG--SFQSNFQDSSPIL  151 (153)
Q Consensus       118 i~~C~~~~~~C~~~~C~~~~g--~~~C~C~~g~~~~  151 (153)
                      .++|....+.|. ..|+..++  +|.|.|+.||.+.
T Consensus       267 ~n~C~~~ng~Cs-~~C~~~~~~~~~~C~C~~g~~l~  301 (318)
T 3sov_A          267 TNPCGIDNGGCS-HLCLMSPVKPFYQCACPTGVKLL  301 (318)
T ss_dssp             CCTTTTTGGGCS-SEEEECSSTTSEEEECSTTCCBC
T ss_pred             ccccccCCCCcc-eEEecCCCCCCeEEECCCCCEEC
Confidence            467754456776 78998876  6999999999754

>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}

Probab=89.51  E-value=0.22  Score=32.73  Aligned_cols=28  Identities=21%  Similarity=0.319  Sum_probs=23.6

Q ss_pred             CCCCCCC-CeeeecCCCcEEecCCCCCcc
Q psy7854         124 DVMICSG-GTCKNTPGSFQSNFQDSSPIL  151 (153)
Q Consensus       124 ~~~~C~~-~~C~~~~g~~~C~C~~g~~~~  151 (153)
                      .+..|.+ +.|.+..++|.|.|.+||.+.
T Consensus       123 ~~~~C~~~g~C~~~~~~~~c~C~~g~~g~  151 (164)
T 3cfw_A          123 QPWSCSGHGECVEIINNYTCNCDVGYYGP  151 (164)
T ss_dssp             CTTSSCSSEEEEEETTEEEEEECTTCBSS
T ss_pred             CCCcCCCCCeecccCCCceeeeCCCcccc
Confidence            4577874 899999999999999999753

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=88.76  E-value=0.13  Score=38.18  Aligned_cols=40  Identities=25%  Similarity=0.603  Sum_probs=30.0

Q ss_pred             ccCCCCCCCCCCCCceeecCCCceeeCCCCcccCCCCCCCcc
Q psy7854          76 NHHTTENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSD  117 (153)
Q Consensus        76 ~~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~g~~C~~  117 (153)
                      .+.|......|.+ .|...+++|+|.|+.||. ..+++.|..
T Consensus       304 ~n~C~~~~g~C~~-lCl~~~~~~~C~C~~g~~-~~d~~~C~~  343 (349)
T 3v64_C          304 KNRCGDNNGGCTH-LCLPSGQNYTCACPTGFR-KINSHACAL  343 (349)
T ss_dssp             CCTTTTGGGGCSS-EEECCTTSCEEECCTTEE-EETTTEEEE
T ss_pred             cCcccCCCCCccc-EeecCCCCCeeECCCCCc-CCCCCcccc
Confidence            4556543345766 899888999999999998 667877754

>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A

Probab=88.16  E-value=0.15  Score=33.28  Aligned_cols=31  Identities=26%  Similarity=0.519  Sum_probs=25.1

Q ss_pred             ccccCCCCCCCC-CeeeecCCCcEEecCCCCCcc
Q psy7854         119 NECLMDVMICSG-GTCKNTPGSFQSNFQDSSPIL  151 (153)
Q Consensus       119 ~~C~~~~~~C~~-~~C~~~~g~~~C~C~~g~~~~  151 (153)
                      ++|  ...+|.+ +.|.+..+.|.|.|.+||.+.
T Consensus       120 ~~~--~~~pc~~~g~C~~~~~~~~c~C~~g~~g~  151 (157)
T 1g1t_A          120 AAC--TNTSCSGHGECVETINNYTCKCDPGFSGL  151 (157)
T ss_dssp             CCC--CTTGGGGSEEEEEETTEEEEEECTTEEST
T ss_pred             CCC--CCCCCCCCCEeecCCCCeeEECCCCccCc
Confidence            345  4577875 899999999999999999764

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=87.89  E-value=0.44  Score=33.34  Aligned_cols=53  Identities=38%  Similarity=0.762  Sum_probs=35.7

Q ss_pred             CCCC-CCceeecCCCceeeCCCCcccCCCCCCCc-cCc---------cccCC--CCCCCC-CeeeecCCCcEEecCCCC
Q psy7854          84 GICT-NGACENLMGTYRCICNPGYEGDPTGKLCS-DQN---------ECLMD--VMICSG-GTCKNTPGSFQSNFQDSS  148 (153)
Q Consensus        84 ~~C~-~~~C~~~~g~~~C~C~~g~~~~~~g~~C~-~i~---------~C~~~--~~~C~~-~~C~~~~g~~~C~C~~g~  148 (153)
                      ..|. ++.|..    ..|.|.+||    .|..|+ +++         .|...  ..+|.+ +.|+.    ..|.|.+||
T Consensus        96 ~~Csg~G~C~~----g~C~C~~G~----~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~----g~C~C~~gw  162 (217)
T 2p28_B           96 SLCHGKGFLEC----GICRCDTGY----IGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC----GQCLCHTSD  162 (217)
T ss_dssp             CTTTTSEEEET----TEEEECTTE----ESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEET----TEEEECCCC
T ss_pred             CccCCCceEEC----CEEECCCCc----cCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEeC----CceECCCCC
Confidence            4574 667763    589999999    566775 221         36422  456874 89974    379999995

>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A

Probab=87.48  E-value=0.21  Score=32.52  Aligned_cols=38  Identities=29%  Similarity=0.828  Sum_probs=28.6

Q ss_pred             cCCcccCCCCCCCCCC-CCceeecCCCceeeCCCCcccCCCCCCCc
Q psy7854          72 VHGANHHTTENPGICT-NGACENLMGTYRCICNPGYEGDPTGKLCS  116 (153)
Q Consensus        72 ~C~~~~~C~~~~~~C~-~~~C~~~~g~~~C~C~~g~~~~~~g~~C~  116 (153)
                      .|+ ..+|..  .+|+ ++.|.+...+|.|.|.+||    .|..|+
T Consensus       116 ICe-~~~~~~--~pc~~~g~C~~~~~~~~c~C~~g~----~g~~Ce  154 (157)
T 1g1t_A          116 LCY-TAACTN--TSCSGHGECVETINNYTCKCDPGF----SGLKCE  154 (157)
T ss_dssp             EEE-ECCCCT--TGGGGSEEEEEETTEEEEEECTTE----ESTTSC
T ss_pred             EeC-cCCCCC--CCCCCCCEeecCCCCeeEECCCCc----cCcccc
Confidence            344 345654  7885 5699999999999999999    556664

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=87.22  E-value=0.12  Score=40.29  Aligned_cols=46  Identities=22%  Similarity=0.577  Sum_probs=11.7

Q ss_pred             ccCCCCCCCCcCCcccCCCCCCCCCCC-CceeecCCCceeeCCCCcccCCCCCCCccC
Q psy7854          62 GLEPPTSRSEVHGANHHTTENPGICTN-GACENLMGTYRCICNPGYEGDPTGKLCSDQ  118 (153)
Q Consensus        62 ~~~~~~~~~~~C~~~~~C~~~~~~C~~-~~C~~~~g~~~C~C~~g~~~~~~g~~C~~i  118 (153)
                      +.|.+++.+..|+ +++|..   +|.+ +.|.+.   +.|.|.+||    .|..|+..
T Consensus       410 C~C~~G~~G~~C~-~~~C~~---~C~~~g~C~~~---~~C~C~~G~----~G~~C~~~  456 (463)
T 2wg3_C          410 CCCSPGWEGDFCR-TAKCEP---ACRHGGVCVRP---NKCLCKKGY----LGPQCEQV  456 (463)
T ss_dssp             EEECTTEESTTSC-EECC----------------------------------------
T ss_pred             ECCCCCcCCCcCC-cCcCCC---CCCCCCEECCC---CEEECCCCc----ccCCCCCC
Confidence            4456666777885 678864   8964 589764   799999999    66676543

>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}

Probab=86.68  E-value=0.48  Score=36.01  Aligned_cols=35  Identities=23%  Similarity=0.386  Sum_probs=27.8

Q ss_pred             CCc-cCccccCCCCCCCC-CeeeecCCCcEEecCC-CCCc
Q psy7854         114 LCS-DQNECLMDVMICSG-GTCKNTPGSFQSNFQD-SSPI  150 (153)
Q Consensus       114 ~C~-~i~~C~~~~~~C~~-~~C~~~~g~~~C~C~~-g~~~  150 (153)
                      .|. ..++|  ...+|.| +.|+...++|.|.|+. ||.+
T Consensus       180 gC~~~~~~C--~~~pC~n~g~C~~~~~~~~C~C~~~~~~G  217 (410)
T 3asi_A          180 GCEGPSTTC--QEDSCSNQGVCLQQWDGFSCDCSMTSFSG  217 (410)
T ss_dssp             SCCCCSSCC--CTTSSSTTCEEEECSSSEEEECTTTSEES
T ss_pred             CCCCCCCCc--ccccCCCCCEecCCCCCceEeccCCcccC
Confidence            453 34678  6789997 9999999999999996 7753

>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4

Probab=86.48  E-value=0.33  Score=29.85  Aligned_cols=49  Identities=18%  Similarity=0.236  Sum_probs=36.4

Q ss_pred             cccCCCCccCCCCCCCCcCCcccC-CCCCCCCC-CCCceeecC-CCceeeCCCCc
Q psy7854          55 DLERLKFGLEPPTSRSEVHGANHH-TTENPGIC-TNGACENLM-GTYRCICNPGY  106 (153)
Q Consensus        55 ~~~~~~~~~~~~~~~~~~C~~~~~-C~~~~~~C-~~~~C~~~~-g~~~C~C~~g~  106 (153)
                      ..|.|..+|...   +..|..++. |....+.| .++.|.... ....|.|..+|
T Consensus        32 e~CrCl~gY~~d---g~~Cv~~Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~   83 (105)
T 1n1i_A           32 EEWRCLLGFKEV---GGKCVPASITCEENNGGCAPEAECTMDDKKEVECKCTKEG   83 (105)
T ss_dssp             EEEEECTTEEEC---SSSEEECCCCTTSGGGGSCTTSEEEECTTSCEEEECCSTT
T ss_pred             EeEEEECCeecc---CCEEEECCcchhhcCCCcCCCcEeEECCCCEEEeECCCCC
Confidence            355666677654   557877788 77655678 588999885 78899999987

>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A

Probab=85.93  E-value=0.26  Score=30.03  Aligned_cols=51  Identities=16%  Similarity=0.284  Sum_probs=36.5

Q ss_pred             eecccCCCCccCCCCCCCCcCCcc--cCCCCCCCCC-CCCceeecC-----CCceeeCCCCc
Q psy7854          53 SQDLERLKFGLEPPTSRSEVHGAN--HHTTENPGIC-TNGACENLM-----GTYRCICNPGY  106 (153)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~C~~~--~~C~~~~~~C-~~~~C~~~~-----g~~~C~C~~g~  106 (153)
                      ....|.|..+|...   +..|..+  +.|......| +++.|....     +...|.|.+||
T Consensus        24 g~e~C~C~~gy~gd---g~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~   82 (99)
T 1ob1_C           24 EREECKCLLNYKQE---GDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPD   82 (99)
T ss_dssp             SCCEEEECTTEEEE---TTEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTT
T ss_pred             CCEEEEecCCeecC---CCeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCC
Confidence            34566777777654   3468655  5787655678 578998775     57899999997

>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}

Probab=85.09  E-value=0.7  Score=35.08  Aligned_cols=36  Identities=31%  Similarity=0.812  Sum_probs=28.4

Q ss_pred             ccCCCCCCCCCCC-CceeecCCCceeeCCC-CcccCCCCCCCcc
Q psy7854          76 NHHTTENPGICTN-GACENLMGTYRCICNP-GYEGDPTGKLCSD  117 (153)
Q Consensus        76 ~~~C~~~~~~C~~-~~C~~~~g~~~C~C~~-g~~~~~~g~~C~~  117 (153)
                      .+.|..  .+|.+ +.|.....+|.|.|.. +|    .|..|+.
T Consensus       185 ~~~C~~--~pC~n~g~C~~~~~~~~C~C~~~~~----~G~~C~~  222 (410)
T 3asi_A          185 STTCQE--DSCSNQGVCLQQWDGFSCDCSMTSF----SGPLCND  222 (410)
T ss_dssp             SSCCCT--TSSSTTCEEEECSSSEEEECTTTSE----ESTTSCE
T ss_pred             CCCccc--ccCCCCCEecCCCCCceEeccCCcc----cCCCCCC
Confidence            467766  88964 5999999999999996 89    5667753

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=81.84  E-value=0.46  Score=37.47  Aligned_cols=45  Identities=16%  Similarity=0.258  Sum_probs=23.3

Q ss_pred             eCCCCcccCCCCCCCccCccccCCCCCCCC-Ceeeec----CCCcEEecCCCCCcc
Q psy7854         101 ICNPGYEGDPTGKLCSDQNECLMDVMICSG-GTCKNT----PGSFQSNFQDSSPIL  151 (153)
Q Consensus       101 ~C~~g~~~~~~g~~C~~i~~C~~~~~~C~~-~~C~~~----~g~~~C~C~~g~~~~  151 (153)
                      .|.+||    .+..|...+.|  ..-.|.+ +.|.+.    ...+.|.|++||.+.
T Consensus       422 ~C~~Gy----~G~~c~~~~~C--~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~  471 (525)
T 4aqs_A          422 VCKEGF----YDLSAEDPYGC--KSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQ  471 (525)
T ss_dssp             EECTTE----ECCCTTSTTSS--EECCCCTTTBCCSSCCBCTTTCCBCBCTTCCST
T ss_pred             CCCCCC----cCCCCCCCCCC--ccCCCCCCceecCCCcccCCCCEEECCCCCcCC
Confidence            466666    33344444445  2333432 333321    234578999998764

>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}

Probab=81.55  E-value=1.1  Score=35.62  Aligned_cols=33  Identities=15%  Similarity=0.032  Sum_probs=24.1

Q ss_pred             ccccCC-CCCCC-CCeeeec-CCCcEEecCCCCCcc
Q psy7854         119 NECLMD-VMICS-GGTCKNT-PGSFQSNFQDSSPIL  151 (153)
Q Consensus       119 ~~C~~~-~~~C~-~~~C~~~-~g~~~C~C~~g~~~~  151 (153)
                      +.|... .++|+ ++.|+.. .+.|.|.|+.||++.
T Consensus        19 ~~c~~~~~~~c~~~a~C~~~~~~~~~c~C~~G~ag~   54 (551)
T 3fby_A           19 RFCPDGSPSECHEHADCVLERDGSRSCVCAVGWAGN   54 (551)
T ss_dssp             CBCTTSSBCCCCTTEEEEECTTSCEEEEECTTEESS
T ss_pred             ccCCCCCCCCCCCCCeeEeCCCCCEecCCCCCCCCC
Confidence            345432 37887 5899875 677899999999753

>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*

Probab=80.31  E-value=2.1  Score=27.89  Aligned_cols=35  Identities=29%  Similarity=0.772  Sum_probs=23.5

Q ss_pred             CCCCC-ceeec--CCCc-eeeCCCCcccCCCCCCCc-cCc-cccC
Q psy7854          85 ICTNG-ACENL--MGTY-RCICNPGYEGDPTGKLCS-DQN-ECLM  123 (153)
Q Consensus        85 ~C~~~-~C~~~--~g~~-~C~C~~g~~~~~~g~~C~-~i~-~C~~  123 (153)
                      +|.|+ .|...  ...+ .|.|+.||    .|..|+ +++ +|..
T Consensus        14 pC~NGGtC~~~~~~s~~~~C~Cp~g~----~G~~Cei~~~~~C~~   54 (145)
T 2i9a_A           14 DCLNGGTCVSNKYFSNIHWCNCPKKF----GGQHCEIDKSKTCYE   54 (145)
T ss_dssp             CCCTTCEEEECSSSTTCEEEECCTTE----ESTTSCEESSCCEEC
T ss_pred             CCCCCCCcCCCccccCCccccCCCCC----CCCceeccccccCCC
Confidence            67654 88765  3556 79999999    567774 333 4643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	153
d1lmja1	44	g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens	8e-09
d1lmja1	44	g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens	8e-04
d1lmja2	42	g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapien	8e-09
d1lmja2	42	g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapien	6e-04
d1uzka2	43	g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sa	1e-08
d1uzka2	43	g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sa	0.001
d1uzka1	43	g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sa	1e-07
d1emoa1	43	g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sa	4e-06
d1apqa_	53	g.3.11.1 (A:) Complement protease C1R {Human (Homo	2e-05
d1i0ua2	41	g.3.11.1 (A:42-82) Low density lipoprotein (LDL) r	2e-05
d1szba2	45	g.3.11.1 (A:124-168) Mannose-binding protein assoc	5e-05
d1kigl_	51	g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bo	2e-04
d2vj3a1	42	g.3.11.1 (A:411-452) Neurogenic locus notch homolo	2e-04
d1dx5i3	40	g.3.11.1 (I:423-462) Thrombomodulin, different EGF	3e-04
d1gl4a2	40	g.3.11.5 (A:359-398) EGF-like domain of nidogen-1	7e-04
d1edmb_	39	g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens	8e-04
d2p3ua1	51	g.3.11.1 (A:87-137) Factor X, N-terminal module {H	0.001
d1nt0a3	45	g.3.11.1 (A:120-164) Mannose-binding protein assoc	0.001
d2vj3a2	39	g.3.11.1 (A:453-491) Neurogenic locus notch homolo	0.001
d1xkba1	39	g.3.11.1 (A:48-86) Factor X, N-terminal module {Hu	0.001
d2c4fl1	37	g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrof	0.001
d1autl1	48	g.3.11.1 (L:49-96) Activated protein c (autoprothr	0.002
d2vj3a3	35	g.3.11.1 (A:492-526) Neurogenic locus notch homolo	0.002
d1autl2	50	g.3.11.1 (L:97-146) Activated protein c (autoproth	0.002
d1emoa2	39	g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sa	0.004

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 44

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.7 bits (111), Expect = 8e-09
 Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)

Query: 80  TENPGICTNGACENLMGTYRCICNPGYEGD-PTGKLC 115
             +P +C  G C N  G + C C+ GYE      K C
Sbjct: 7   RISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNC 43

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 44

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.3 bits (76), Expect = 8e-04
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 116 SDQNECLMDVMICSGGTCKNTPGSFQ 141
           +D +EC +   +C  G C NTPG F+
Sbjct: 1   TDIDECRISPDLCGRGQCVNTPGDFE 26

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.7 bits (111), Expect = 8e-09
 Identities = 14/36 (38%), Positives = 19/36 (52%)

Query: 80  TENPGICTNGACENLMGTYRCICNPGYEGDPTGKLC 115
             +P +C  G C N  G+YRC C PG++  P    C
Sbjct: 6   QRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISAC 41

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.6 bits (77), Expect = 6e-04
 Identities = 12/25 (48%), Positives = 17/25 (68%)

Query: 117 DQNECLMDVMICSGGTCKNTPGSFQ 141
           D +EC  D ++C GG C NT GS++
Sbjct: 1   DIDECQRDPLLCRGGVCHNTEGSYR 25

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.9 bits (109), Expect = 1e-08
 Identities = 13/36 (36%), Positives = 20/36 (55%)

Query: 80  TENPGICTNGACENLMGTYRCICNPGYEGDPTGKLC 115
            E PG+C  G C N  G+++C C  GY  +   ++C
Sbjct: 7   QELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVC 42

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.2 bits (76), Expect = 0.001
 Identities = 13/25 (52%), Positives = 15/25 (60%)

Query: 117 DQNECLMDVMICSGGTCKNTPGSFQ 141
           D +EC     +C GG C NT GSFQ
Sbjct: 2   DIDECQELPGLCQGGKCINTFGSFQ 26

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.7 bits (103), Expect = 1e-07
 Identities = 15/37 (40%), Positives = 20/37 (54%)

Query: 81  ENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSD 117
            +P  C +G C N  G+Y C C P +E +PT   C D
Sbjct: 7   LDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVD 43

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (93), Expect = 4e-06
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)

Query: 81  ENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSD 117
           + P +C +G C N  G+YRC C  GY     G  C D
Sbjct: 9   KEPDVCKHGQCINTDGSYRCECPFGYILA--GNECVD 43

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (89), Expect = 2e-05
 Identities = 13/43 (30%), Positives = 17/43 (39%)

Query: 76  NHHTTENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQ 118
           +    E+P       C N +G Y C C PGYE       C  +
Sbjct: 11  SKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSCQAE 53

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]} Length = 41

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.8 bits (88), Expect = 2e-05
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 81  ENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSD 117
           ++P  C +  C NL G Y+C C  G++ DP  K C  
Sbjct: 5   QDPDTC-SQLCVNLEGGYKCQCEEGFQLDPHTKACKA 40

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 45

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.8 bits (85), Expect = 5e-05
 Identities = 10/28 (35%), Positives = 14/28 (50%)

Query: 91  CENLMGTYRCICNPGYEGDPTGKLCSDQ 118
           C N +G + C C  GY      + CS+Q
Sbjct: 18  CHNHLGGFYCSCRAGYVLHRNKRTCSEQ 45

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]} Length = 51

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 35.6 bits (82), Expect = 2e-04
 Identities = 8/31 (25%), Positives = 8/31 (25%)

Query: 91  CENLMGTYRCICNPGYEGDPTGKLCSDQNEC 121
           C       RC C  GY      K C      
Sbjct: 12  CREERSEVRCSCAHGYVLGDDSKSCVSTERF 42

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (80), Expect = 2e-04
 Identities = 9/31 (29%), Positives = 14/31 (45%), Gaps = 1/31 (3%)

Query: 80  TENPGICTNGA-CENLMGTYRCICNPGYEGD 109
           +     C +   C N +G++ C C  GY G 
Sbjct: 7   SLGANPCEHAGKCINTLGSFECQCLQGYTGP 37

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]} Length = 40

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.4 bits (79), Expect = 3e-04
 Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 81  ENPGICTNGACENLMGTYRCICNPGYEGD-PTGKLC 115
           EN G C +G C NL GT+ CIC P        G  C
Sbjct: 6   ENGGFC-SGVCHNLPGTFECICGPDSALAGQIGTDC 40

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 40

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.3 bits (76), Expect = 7e-04
 Identities = 9/40 (22%), Positives = 15/40 (37%), Gaps = 3/40 (7%)

Query: 80  TENPGIC-TNGACENLMGTYRCICNPGYEGDPTGKLCSDQ 118
             N   C  +  C +    + C C   Y G+  G+ C  +
Sbjct: 3   ANNRHQCSVHAECRDYATGFCCRCVANYTGN--GRQCVAE 40

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 8e-04
 Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 1/25 (4%)

Query: 86  CTNGA-CENLMGTYRCICNPGYEGD 109
           C NG  C++ + +Y C C  G+EG 
Sbjct: 11  CLNGGSCKDDINSYECWCPFGFEGK 35

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]} Length = 51

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.2 bits (76), Expect = 0.001
 Identities = 8/31 (25%), Positives = 9/31 (29%)

Query: 91  CENLMGTYRCICNPGYEGDPTGKLCSDQNEC 121
           C     +  C C  GY     GK C      
Sbjct: 14  CHEEQNSVVCSCARGYTLADNGKACIPTGPY 44

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 45

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 33.0 bits (75), Expect = 0.001
 Identities = 10/26 (38%), Positives = 11/26 (42%)

Query: 91  CENLMGTYRCICNPGYEGDPTGKLCS 116
           C N +G Y C C  GY        CS
Sbjct: 18  CHNYLGGYYCSCRVGYILHQNKHTCS 43

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.7 bits (75), Expect = 0.001
 Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 1/25 (4%)

Query: 86  CTNGA-CENLMGTYRCICNPGYEGD 109
           C N A C + +G ++CIC PGYEG 
Sbjct: 9   CQNDATCLDQIGEFQCICMPGYEGV 33

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.7 bits (75), Expect = 0.001
 Identities = 10/25 (40%), Positives = 14/25 (56%), Gaps = 1/25 (4%)

Query: 86  CTNGA-CENLMGTYRCICNPGYEGD 109
           C N   C++ +G Y C C  G+EG 
Sbjct: 8   CQNQGKCKDGLGEYTCTCLEGFEGK 32

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]} Length = 37

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 32.7 bits (75), Expect = 0.001
 Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 1/25 (4%)

Query: 86  CTNGA-CENLMGTYRCICNPGYEGD 109
           C NG  C++ + +Y C C P +EG 
Sbjct: 10  CQNGGSCKDQLQSYICFCLPAFEGR 34

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]} Length = 48

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.5 bits (74), Expect = 0.002
 Identities = 9/24 (37%), Positives = 15/24 (62%)

Query: 86  CTNGACENLMGTYRCICNPGYEGD 109
           C +G C + +G++ C C  G+EG 
Sbjct: 16  CGHGTCIDGIGSFSCDCRSGWEGR 39

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Length = 35

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.0 bits (73), Expect = 0.002
 Identities = 6/25 (24%), Positives = 12/25 (48%), Gaps = 1/25 (4%)

Query: 86  CTNGA-CENLMGTYRCICNPGYEGD 109
           C +   C + +  ++C C  G+ G 
Sbjct: 8   CLHNGRCLDKINEFQCECPTGFTGH 32

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]} Length = 50

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.5 bits (74), Expect = 0.002
 Identities = 9/31 (29%), Positives = 12/31 (38%)

Query: 91  CENLMGTYRCICNPGYEGDPTGKLCSDQNEC 121
           C   +G  RC C PGY+       C    + 
Sbjct: 13  CLEEVGWRRCSCAPGYKLGDDLLQCHPAVKF 43

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.4 bits (71), Expect = 0.004
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 85  ICTNGACENLMGTYRCICNPGYEGDPT 111
            C NG C+N++G + C C  G+E  P 
Sbjct: 9   PCGNGTCKNVIGGFECTCEEGFEPGPM 35

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	153
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	99.05
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	99.04
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	99.01
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.99
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.99
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.98
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	98.97
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.97
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.93
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	98.91
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.87
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.81
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	98.81
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	98.79
d1szba2	45	Mannose-binding protein associated serine protease	98.77
d1nt0a3	45	Mannose-binding protein associated serine protease	98.74
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	98.74
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	98.62
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	98.62
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	98.6
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	98.56
d1nzia2	42	Complement C1S component {Human (Homo sapiens) [Ta	98.54
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	98.51
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	98.51
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	98.49
d3bpse1	40	Low density lipoprotein (LDL) receptor, different	98.47
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	98.46
d1nt0a3	45	Mannose-binding protein associated serine protease	98.44
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	98.44
d1szba2	45	Mannose-binding protein associated serine protease	98.43
d3bpse1	40	Low density lipoprotein (LDL) receptor, different	98.41
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	98.34
d1nzia2	42	Complement C1S component {Human (Homo sapiens) [Ta	98.29
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	98.25
d1kigl_	51	Factor X, N-terminal module {Cow (Bos taurus) [Tax	98.19
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	98.19
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	98.17
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	98.1
d1autl2	50	Activated protein c (autoprothrombin IIa) {Human (	98.08
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	98.06
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	98.04
d2p3ua1	51	Factor X, N-terminal module {Human (Homo sapiens)	98.02
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	98.02
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	97.98
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.92
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	97.9
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.88
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	97.86
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	97.73
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	97.66
d1ijqa2	50	Low density lipoprotein (LDL) receptor, different	97.66
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	97.57
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	97.56
d1rfnb_	57	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	97.5
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	97.49
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	97.48
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	97.33
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	97.32
d1autl2	50	Activated protein c (autoprothrombin IIa) {Human (	97.18
d2p3ua1	51	Factor X, N-terminal module {Human (Homo sapiens)	97.15
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	97.01
d2bz6l1	53	Coagulation factor VIIa {Human (Homo sapiens) [Tax	96.93
d1ijqa2	50	Low density lipoprotein (LDL) receptor, different	96.91
d1kigl_	51	Factor X, N-terminal module {Cow (Bos taurus) [Tax	96.83
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	96.76
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	96.47
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	96.18
d1k36a_	46	Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI	95.71
d1k36a_	46	Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI	95.55
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	95.51
d1dx5i1	43	Thrombomodulin, different EGF-like domains {Human	95.51
d1rfnb_	57	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	95.26
d2bz6l1	53	Coagulation factor VIIa {Human (Homo sapiens) [Tax	95.16
d1dx5i1	43	Thrombomodulin, different EGF-like domains {Human	91.82
d1moxc_	49	Transforming growth factor alpha {Human (Homo sapi	91.72
d1ioxa_	50	Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]	90.76
d1ioxa_	50	Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]	90.46
d1xdtr_	41	Heparin-binding epidermal growth factor, HBEGF {Hu	88.01

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=2.3e-11  Score=62.59  Aligned_cols=41  Identities=34%  Similarity=0.816  Sum_probs=35.9

Q ss_pred             cccCCCCCCCCCCCCceeecCCCceeeCCCCcccCCCCCCC
Q psy7854          75 ANHHTTENPGICTNGACENLMGTYRCICNPGYEGDPTGKLC  115 (153)
Q Consensus        75 ~~~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~g~~C  115 (153)
                      |||||...+..|.++.|+|++|+|+|.|++||.+.++++.|
T Consensus         1 DidEC~~~~~~C~~~~C~Nt~Gsy~C~C~~Gy~l~~d~~~C   41 (42)
T d1lmja2           1 DIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISAC   41 (42)
T ss_dssp             ECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCCCSSSCCC
T ss_pred             CccccCCCCCCCCCCEeECCCCCeEEeCCCCCeECcCCCcc
Confidence            68999887788887799999999999999999887777665

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=1.5e-11  Score=63.60  Aligned_cols=43  Identities=30%  Similarity=0.805  Sum_probs=36.7

Q ss_pred             CcccCCCCCCCCCCCCceeecCCCceeeCCCCcccCCCCCCCc
Q psy7854          74 GANHHTTENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCS  116 (153)
Q Consensus        74 ~~~~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~g~~C~  116 (153)
                      +|||||...++.|.++.|+|++|+|.|.|++||.+..+++.|+
T Consensus         1 qDinEC~~~~~~c~~~~C~Nt~Gsy~C~C~~Gy~l~~~~~~Ce   43 (43)
T d1uzka2           1 EDIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVCD   43 (43)
T ss_dssp             EECCHHHHCGGGGBTSEEEECSSCEEEECCTTCCBCTTTCBBC
T ss_pred             CCcccccCCCCCcCCCEEECCCCCeEeECCCCCeECcCCCccC
Confidence            4799998777788666999999999999999999887777663

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=5.1e-11  Score=61.24  Aligned_cols=35  Identities=34%  Similarity=0.791  Sum_probs=31.5

Q ss_pred             cCccccCCCCCCCCCeeeecCCCcEEecCCCCCcc
Q psy7854         117 DQNECLMDVMICSGGTCKNTPGSFQSNFQDSSPIL  151 (153)
Q Consensus       117 ~i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~  151 (153)
                      |||||...++.|.++.|+|++|+|+|.|++||.+.
T Consensus         1 DidEC~~~~~~C~~~~C~Nt~Gsy~C~C~~Gy~l~   35 (42)
T d1lmja2           1 DIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLS   35 (42)
T ss_dssp             ECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCCC
T ss_pred             CccccCCCCCCCCCCEeECCCCCeEEeCCCCCeEC
Confidence            68999888888976899999999999999999753

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=5.7e-11  Score=61.36  Aligned_cols=36  Identities=36%  Similarity=0.558  Sum_probs=31.8

Q ss_pred             ccCccccCCCCCCCCCeeeecCCCcEEecCCCCCcc
Q psy7854         116 SDQNECLMDVMICSGGTCKNTPGSFQSNFQDSSPIL  151 (153)
Q Consensus       116 ~~i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~  151 (153)
                      +|||||...++.|.++.|+|++|+|+|.|++||.+.
T Consensus         1 qDinEC~~~~~~c~~~~C~Nt~Gsy~C~C~~Gy~l~   36 (43)
T d1uzka2           1 EDIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLN   36 (43)
T ss_dssp             EECCHHHHCGGGGBTSEEEECSSCEEEECCTTCCBC
T ss_pred             CCcccccCCCCCcCCCEEECCCCCeEeECCCCCeEC
Confidence            489999888888866899999999999999999753

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=7.5e-11  Score=60.98  Aligned_cols=35  Identities=31%  Similarity=0.736  Sum_probs=31.3

Q ss_pred             ccCccccCCCCCCCCCeeeecCCCcEEecCCCCCc
Q psy7854         116 SDQNECLMDVMICSGGTCKNTPGSFQSNFQDSSPI  150 (153)
Q Consensus       116 ~~i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~  150 (153)
                      +|||||......|.++.|+|++|+|+|.|++||.+
T Consensus         1 TDidEC~~~~~~C~~~~C~Nt~Gsy~C~C~~Gy~~   35 (44)
T d1lmja1           1 TDIDECRISPDLCGRGQCVNTPGDFECKCDEGYES   35 (44)
T ss_dssp             CCCCTTTTCSSTTTTSCEEEETTEEEECCCSSEEE
T ss_pred             CcccccCCCCCCCCCCEeEcCCCCeEEeCCCCCcc
Confidence            48999988888887689999999999999999964

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=1.8e-10  Score=59.51  Aligned_cols=42  Identities=31%  Similarity=0.713  Sum_probs=34.6

Q ss_pred             CcccCCCCCCCCCCCCceeecCCCceeeCCCCcccC-CCCCCC
Q psy7854          74 GANHHTTENPGICTNGACENLMGTYRCICNPGYEGD-PTGKLC  115 (153)
Q Consensus        74 ~~~~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~-~~g~~C  115 (153)
                      .|||||...+..|.++.|.|++|+|.|.|++||.+. +.++.|
T Consensus         1 TDidEC~~~~~~C~~~~C~Nt~Gsy~C~C~~Gy~~~~~~g~~C   43 (44)
T d1lmja1           1 TDIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNC   43 (44)
T ss_dssp             CCCCTTTTCSSTTTTSCEEEETTEEEECCCSSEEECTTTSSSE
T ss_pred             CcccccCCCCCCCCCCEeEcCCCCeEEeCCCCCccCCCCCCcC
Confidence            379999987788877799999999999999999874 244444

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.97  E-value=2.1e-10  Score=58.92  Aligned_cols=36  Identities=31%  Similarity=0.517  Sum_probs=32.4

Q ss_pred             ccCccccCCCCCCCC-CeeeecCCCcEEecCCCCCcc
Q psy7854         116 SDQNECLMDVMICSG-GTCKNTPGSFQSNFQDSSPIL  151 (153)
Q Consensus       116 ~~i~~C~~~~~~C~~-~~C~~~~g~~~C~C~~g~~~~  151 (153)
                      +|||||...+++|.+ ++|+++.++|+|.|++||.+.
T Consensus         1 qDideC~~~~~pC~n~g~C~n~~g~y~C~C~~G~~G~   37 (42)
T d2vj3a1           1 QDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGP   37 (42)
T ss_dssp             CCCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEEST
T ss_pred             CCCccccCCCCCCCCCcEeECCCCCEEeECCCCCcCC
Confidence            489999877899996 999999999999999999764

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.97  E-value=1.4e-10  Score=59.85  Aligned_cols=43  Identities=33%  Similarity=0.546  Sum_probs=33.8

Q ss_pred             cCCcccCCCCCCCCCCCCceeecCCCceeeCCCCcccCCCCCCCcc
Q psy7854          72 VHGANHHTTENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSD  117 (153)
Q Consensus        72 ~C~~~~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~g~~C~~  117 (153)
                      +|.|||||...... .++.|+|++|+|.|.|++||.+  ++..|+|
T Consensus         1 sCvDidEC~~~~~~-~~~~C~Nt~Gsy~C~C~~Gy~~--~g~~C~D   43 (43)
T d1emoa1           1 SAVDMDECKEPDVC-KHGQCINTDGSYRCECPFGYIL--AGNECVD   43 (43)
T ss_dssp             CCCCCCSSSSTTSC-SSSCCCCCSSCCCCCCCTTEEE--SSSCEEE
T ss_pred             CCcceeccCCcCCC-CCCEeECCCCCeEeECCCCccc--CCCcccC
Confidence            48899999864333 3558999999999999999987  5555643

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=2.2e-10  Score=59.14  Aligned_cols=43  Identities=30%  Similarity=0.589  Sum_probs=35.0

Q ss_pred             CcccCCCCCCCCCCCCceeecCCCceeeCCCCcccCCCCCCCcc
Q psy7854          74 GANHHTTENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSD  117 (153)
Q Consensus        74 ~~~~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~g~~C~~  117 (153)
                      .|||||+.....| ++.|+|++|+|.|.|++||.+.++++.|.|
T Consensus         1 TDidEC~~~~~~c-~~~C~Nt~G~y~C~C~~Gy~l~~d~~~C~D   43 (43)
T d1uzka1           1 TDVNECLDPTTCI-SGNCVNTPGSYICDCPPDFELNPTRVGCVD   43 (43)
T ss_dssp             CCCCGGGSTTSSB-TSEEEEETTEEEEECCTTCEECTTSSBEEC
T ss_pred             CCccccCCCCcCc-CCEeECCCCCEEEecCCCCEECCCCCcccC
Confidence            3789998754444 459999999999999999999888877754

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.91  E-value=5.2e-10  Score=57.05  Aligned_cols=41  Identities=34%  Similarity=0.848  Sum_probs=35.6

Q ss_pred             ccCCCCCCCCCCCCceeecCCCceeeCCCCcccCCCCCCCccC
Q psy7854          76 NHHTTENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQ  118 (153)
Q Consensus        76 ~~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~g~~C~~i  118 (153)
                      ||||.. +++|.+ .|.|+.|+|.|.|++||.+.++++.|++|
T Consensus         1 idEC~~-~~~C~~-~C~n~~Gsy~C~C~~Gy~L~~d~~~C~ai   41 (41)
T d1i0ua2           1 IDECQD-PDTCSQ-LCVNLEGGYKCQCEEGFQLDPHTKACKAV   41 (41)
T ss_dssp             CCTTTT-TTSCSS-CEECSSSCCEECCCTTEEECTTTCCEEEC
T ss_pred             CccCCC-CCCCCC-EeECCCCCEEeECCCCCeECCCCCccccC
Confidence            588974 578976 89999999999999999999889888765

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=2.1e-10  Score=59.10  Aligned_cols=36  Identities=25%  Similarity=0.355  Sum_probs=29.7

Q ss_pred             CCccCccccCCCCCCCCCeeeecCCCcEEecCCCCCc
Q psy7854         114 LCSDQNECLMDVMICSGGTCKNTPGSFQSNFQDSSPI  150 (153)
Q Consensus       114 ~C~~i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~  150 (153)
                      .|.|||||......| ++.|+|++|+|.|.|++||.+
T Consensus         1 sCvDidEC~~~~~~~-~~~C~Nt~Gsy~C~C~~Gy~~   36 (43)
T d1emoa1           1 SAVDMDECKEPDVCK-HGQCINTDGSYRCECPFGYIL   36 (43)
T ss_dssp             CCCCCCSSSSTTSCS-SSCCCCCSSCCCCCCCTTEEE
T ss_pred             CCcceeccCCcCCCC-CCEeECCCCCeEeECCCCccc
Confidence            478999997544444 489999999999999999964

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=1.2e-09  Score=56.36  Aligned_cols=34  Identities=38%  Similarity=0.654  Sum_probs=28.4

Q ss_pred             ccCccccCCCCCCCCCeeeecCCCcEEecCCCCCc
Q psy7854         116 SDQNECLMDVMICSGGTCKNTPGSFQSNFQDSSPI  150 (153)
Q Consensus       116 ~~i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~  150 (153)
                      +|||||......|. +.|+|++|+|+|.|++||.+
T Consensus         1 TDidEC~~~~~~c~-~~C~Nt~G~y~C~C~~Gy~l   34 (43)
T d1uzka1           1 TDVNECLDPTTCIS-GNCVNTPGSYICDCPPDFEL   34 (43)
T ss_dssp             CCCCGGGSTTSSBT-SEEEEETTEEEEECCTTCEE
T ss_pred             CCccccCCCCcCcC-CEeECCCCCEEEecCCCCEE
Confidence            48999986544444 89999999999999999964

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=8.3e-10  Score=55.58  Aligned_cols=33  Identities=36%  Similarity=0.687  Sum_probs=29.1

Q ss_pred             cCccccCCCCCCCCCeeeecCCCcEEecCCCCCcc
Q psy7854         117 DQNECLMDVMICSGGTCKNTPGSFQSNFQDSSPIL  151 (153)
Q Consensus       117 ~i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~  151 (153)
                      |||||.. .+.|. +.|+|++|+|+|.|++||.+.
T Consensus         1 DidEC~~-~~~C~-~~C~N~~Gsy~C~C~~Gy~l~   33 (40)
T d1dx5i3           1 DIDECEN-GGFCS-GVCHNLPGTFECICGPDSALA   33 (40)
T ss_dssp             ECCHHHH-CSSCS-SEEEECSSSEEEEECSSSSCE
T ss_pred             CccccCC-CcCcc-CEeeCCCCCeEeECCCCCeeC
Confidence            6899974 58887 899999999999999999863

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=2.8e-09  Score=54.59  Aligned_cols=39  Identities=31%  Similarity=0.763  Sum_probs=32.9

Q ss_pred             CcccCCCCCCCCCC-CCceeecCCCceeeCCCCcccCCCCCCCc
Q psy7854          74 GANHHTTENPGICT-NGACENLMGTYRCICNPGYEGDPTGKLCS  116 (153)
Q Consensus        74 ~~~~~C~~~~~~C~-~~~C~~~~g~~~C~C~~g~~~~~~g~~C~  116 (153)
                      +|||||....++|. +++|++..++|.|.|++||    .|..|+
T Consensus         1 qDideC~~~~~pC~n~g~C~n~~g~y~C~C~~G~----~G~~Ce   40 (42)
T d2vj3a1           1 QDVDECSLGANPCEHAGKCINTLGSFECQCLQGY----TGPRCE   40 (42)
T ss_dssp             CCCCTTTSSSCSSSTTCEEEECSSSEEEECCTTE----ESTTSC
T ss_pred             CCCccccCCCCCCCCCcEeECCCCCEEeECCCCC----cCCCCc
Confidence            47899987678996 5699999999999999999    555664

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=2.2e-09  Score=55.80  Aligned_cols=41  Identities=29%  Similarity=0.754  Sum_probs=33.6

Q ss_pred             ccCCCCCCC---CCCCCceeecCCCceeeCCCCcccCCCCCCCcc
Q psy7854          76 NHHTTENPG---ICTNGACENLMGTYRCICNPGYEGDPTGKLCSD  117 (153)
Q Consensus        76 ~~~C~~~~~---~C~~~~C~~~~g~~~C~C~~g~~~~~~g~~C~~  117 (153)
                      ||||.....   .|.+ .|.|++|+|+|.|++||.+..+++.|+|
T Consensus         1 IdEC~~~~~~~~~C~~-~C~Nt~Gsy~C~C~~Gy~l~~d~~tC~D   44 (45)
T d1szba2           1 IDECQVAPGEAPTCDH-HCHNHLGGFYCSCRAGYVLHRNKRTCSE   44 (45)
T ss_dssp             CCTTCCCTTSCCSSSS-EEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred             CcCCcCCCCCCCCCCC-CCccCCCCeEEECCCCCeECCCCCCccC
Confidence            578876544   3544 8999999999999999999888888865

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.74  E-value=2.3e-09  Score=55.76  Aligned_cols=42  Identities=29%  Similarity=0.624  Sum_probs=31.9

Q ss_pred             ccCCCCCCC---CCCCCceeecCCCceeeCCCCcccCCCCCCCccC
Q psy7854          76 NHHTTENPG---ICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQ  118 (153)
Q Consensus        76 ~~~C~~~~~---~C~~~~C~~~~g~~~C~C~~g~~~~~~g~~C~~i  118 (153)
                      ||||+....   +|.+ .|+|++|+|+|.|++||.+..+++.|+.+
T Consensus         1 IdEC~~~~~~~~~C~~-~C~Nt~gsy~C~C~~Gy~L~~d~~tC~~i   45 (45)
T d1nt0a3           1 VDECRTSLGDSVPCDH-YCHNYLGGYYCSCRVGYILHQNKHTCSAL   45 (45)
T ss_dssp             CCTTC-------CCSS-EEEEETTEEEEECCTTEEECTTSSCEEEC
T ss_pred             CcCCccCCCCcCCCCC-EeecCCCCEEEeCCCCCEECCCCCccccC
Confidence            578876433   3555 89999999999999999998888887653

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=3.9e-09  Score=56.86  Aligned_cols=43  Identities=26%  Similarity=0.528  Sum_probs=32.9

Q ss_pred             CcccCCCCCCCCCC-------CCceeecCCCceeeCCCCcccCCCCCCCc
Q psy7854          74 GANHHTTENPGICT-------NGACENLMGTYRCICNPGYEGDPTGKLCS  116 (153)
Q Consensus        74 ~~~~~C~~~~~~C~-------~~~C~~~~g~~~C~C~~g~~~~~~g~~C~  116 (153)
                      +|||||......|.       ...|+|++|+|.|.|++||.+..+++.|+
T Consensus         2 vDidEC~~~~~~c~~~~~~~c~~~C~Nt~GsY~C~C~~Gy~l~~d~~tC~   51 (53)
T d1apqa_           2 VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSCQ   51 (53)
T ss_dssp             CSCCTTTCSTTTCCCSSSCTTSSEEEEETTEEEEECSTTCEECTTSSCEE
T ss_pred             eecccccCCCCCcccCCCCCccCEeEcCCCCeEeECCCCCeECCCCCcee
Confidence            46778876544441       12799999999999999999887787764

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.62  E-value=2e-08  Score=50.36  Aligned_cols=33  Identities=21%  Similarity=0.396  Sum_probs=30.1

Q ss_pred             cCccccCCCCCCCC-CeeeecCCCcEEecCCCCCcc
Q psy7854         117 DQNECLMDVMICSG-GTCKNTPGSFQSNFQDSSPIL  151 (153)
Q Consensus       117 ~i~~C~~~~~~C~~-~~C~~~~g~~~C~C~~g~~~~  151 (153)
                      |+|+|  .+++|.| ++|++..++|+|.|++||.+.
T Consensus         2 d~d~C--~~~PC~ngg~C~~~~~~y~C~C~~g~~G~   35 (39)
T d1edmb_           2 DGDQC--ESNPCLNGGSCKDDINSYECWCPFGFEGK   35 (39)
T ss_dssp             CCCTT--TTCCCCTTCEEEEETTEEEEECCTTCCST
T ss_pred             ccccC--CCCCCCCCcEEEcCCCCEEEECCCCCCCC
Confidence            68999  6899997 999999999999999999865

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.62  E-value=7e-09  Score=51.45  Aligned_cols=34  Identities=21%  Similarity=0.382  Sum_probs=30.3

Q ss_pred             cCccccCCCCCCCC-CeeeecCCCcEEecCCCCCccc
Q psy7854         117 DQNECLMDVMICSG-GTCKNTPGSFQSNFQDSSPILK  152 (153)
Q Consensus       117 ~i~~C~~~~~~C~~-~~C~~~~g~~~C~C~~g~~~~~  152 (153)
                      |+|+|  .+++|.| ++|++..++|.|.|++||.+..
T Consensus         1 D~d~C--~~~PC~ngg~C~~~~~~y~C~C~~g~~G~~   35 (37)
T d2c4fl1           1 DGDQC--ASSPCQNGGSCKDQLQSYICFCLPAFEGRN   35 (37)
T ss_dssp             TCCGG--GGCCCCTTCEEEEETTEEEEECCTTEESTT
T ss_pred             CcccC--CCCCCCCCCEEECCCCCeEEECCCCCcCCC
Confidence            68999  6899997 9999999999999999998753

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=1.5e-08  Score=54.46  Aligned_cols=35  Identities=17%  Similarity=0.301  Sum_probs=28.3

Q ss_pred             ccCccccCCCCCCC-C------CeeeecCCCcEEecCCCCCc
Q psy7854         116 SDQNECLMDVMICS-G------GTCKNTPGSFQSNFQDSSPI  150 (153)
Q Consensus       116 ~~i~~C~~~~~~C~-~------~~C~~~~g~~~C~C~~g~~~  150 (153)
                      .|||||....+.|. +      +.|+|++|+|+|.|++||.+
T Consensus         2 vDidEC~~~~~~c~~~~~~~c~~~C~Nt~GsY~C~C~~Gy~l   43 (53)
T d1apqa_           2 VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYEL   43 (53)
T ss_dssp             CSCCTTTCSTTTCCCSSSCTTSSEEEEETTEEEEECSTTCEE
T ss_pred             eecccccCCCCCcccCCCCCccCEeEcCCCCeEeECCCCCeE
Confidence            48899987666553 1      48999999999999999964

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=2.6e-08  Score=49.88  Aligned_cols=32  Identities=28%  Similarity=0.412  Sum_probs=28.8

Q ss_pred             CccccCCCCCCCC-CeeeecCCCcEEecCCCCCcc
Q psy7854         118 QNECLMDVMICSG-GTCKNTPGSFQSNFQDSSPIL  151 (153)
Q Consensus       118 i~~C~~~~~~C~~-~~C~~~~g~~~C~C~~g~~~~  151 (153)
                      ||+|  .+++|.| +.|++..++|+|.|++||.+.
T Consensus         1 Id~C--~~~PC~n~g~C~~~~~~y~C~C~~G~~G~   33 (39)
T d2vj3a2           1 VNEC--VSNPCQNDATCLDQIGEFQCICMPGYEGV   33 (39)
T ss_dssp             CCTT--TTCCCCSSCEEEECSSCEEEECCTTEESS
T ss_pred             CcCC--cCCCCCCCCEEECCCCCEEEeCCCCCccC
Confidence            6889  6799997 899999999999999999764

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=2.6e-08  Score=50.66  Aligned_cols=39  Identities=31%  Similarity=0.642  Sum_probs=32.6

Q ss_pred             cCCCC-CCCCCCCCceeecCCCceeeCCCCcccCCCCCCCc
Q psy7854          77 HHTTE-NPGICTNGACENLMGTYRCICNPGYEGDPTGKLCS  116 (153)
Q Consensus        77 ~~C~~-~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~g~~C~  116 (153)
                      |||+. ..+.|.+ .|+|++|+|+|.|+.||.+.++++.|.
T Consensus         1 dEC~~~~~~~C~~-~C~n~~Gsy~C~C~~Gy~L~~d~~tC~   40 (42)
T d1nzia2           1 NECTDFVDVPCSH-FCNNFIGGYFCSCPPEYFLHDDMKNCG   40 (42)
T ss_dssp             CTTTC-CCCCSSS-EEEEETTEEEEECCTTCEECTTSSCEE
T ss_pred             CCCCCCCCcCCCC-EeecCCCCEEEeCCCCCEECCCCCeec
Confidence            57764 3367877 999999999999999999988888774

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=5.5e-08  Score=48.68  Aligned_cols=36  Identities=31%  Similarity=0.841  Sum_probs=30.8

Q ss_pred             cccCCCCCCCCCCC-CceeecCCCceeeCCCCcccCCCCCCCc
Q psy7854          75 ANHHTTENPGICTN-GACENLMGTYRCICNPGYEGDPTGKLCS  116 (153)
Q Consensus        75 ~~~~C~~~~~~C~~-~~C~~~~g~~~C~C~~g~~~~~~g~~C~  116 (153)
                      |+|+|..  +||.+ ++|++..++|.|.|++||    .|..|+
T Consensus         2 d~d~C~~--~PC~ngg~C~~~~~~y~C~C~~g~----~G~~Ce   38 (39)
T d1edmb_           2 DGDQCES--NPCLNGGSCKDDINSYECWCPFGF----EGKNCE   38 (39)
T ss_dssp             CCCTTTT--CCCCTTCEEEEETTEEEEECCTTC----CSTTSC
T ss_pred             ccccCCC--CCCCCCcEEEcCCCCEEEECCCCC----CCCCCC
Confidence            6789987  89975 599999999999999999    666664

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=2.4e-08  Score=50.63  Aligned_cols=31  Identities=26%  Similarity=0.587  Sum_probs=27.3

Q ss_pred             CccccCCCCCCCCCeeeecCCCcEEecCCCCCc
Q psy7854         118 QNECLMDVMICSGGTCKNTPGSFQSNFQDSSPI  150 (153)
Q Consensus       118 i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~  150 (153)
                      ||||. ..+.|. +.|+|++|+|+|.|++||.+
T Consensus         1 idEC~-~~~~C~-~~C~n~~Gsy~C~C~~Gy~L   31 (41)
T d1i0ua2           1 IDECQ-DPDTCS-QLCVNLEGGYKCQCEEGFQL   31 (41)
T ss_dssp             CCTTT-TTTSCS-SCEECSSSCCEECCCTTEEE
T ss_pred             CccCC-CCCCCC-CEeECCCCCEEeECCCCCeE
Confidence            68996 567887 89999999999999999975

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=8.1e-09  Score=51.85  Aligned_cols=33  Identities=33%  Similarity=0.787  Sum_probs=28.4

Q ss_pred             cccCCCCCCCCCCCCceeecCCCceeeCCCCcccC
Q psy7854          75 ANHHTTENPGICTNGACENLMGTYRCICNPGYEGD  109 (153)
Q Consensus        75 ~~~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~  109 (153)
                      |||||.. .++|.+ .|+|++|+|+|.|++||.+.
T Consensus         1 DidEC~~-~~~C~~-~C~N~~Gsy~C~C~~Gy~l~   33 (40)
T d1dx5i3           1 DIDECEN-GGFCSG-VCHNLPGTFECICGPDSALA   33 (40)
T ss_dssp             ECCHHHH-CSSCSS-EEEECSSSEEEEECSSSSCE
T ss_pred             CccccCC-CcCccC-EeeCCCCCeEeECCCCCeeC
Confidence            5889975 478876 99999999999999999773

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.47  E-value=4.6e-08  Score=49.20  Aligned_cols=32  Identities=25%  Similarity=0.423  Sum_probs=29.0

Q ss_pred             CccccCCCCCCCCCeeeecCCCcEEecCCCCCc
Q psy7854         118 QNECLMDVMICSGGTCKNTPGSFQSNFQDSSPI  150 (153)
Q Consensus       118 i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~  150 (153)
                      +|||+...+.|. ..|+|++|+|.|.|++||.+
T Consensus         2 ~neC~~~nggC~-h~C~n~~g~~~C~C~~Gy~L   33 (40)
T d3bpse1           2 TNECLDNNGGCS-HVCNDLKIGYECLCPDGFQL   33 (40)
T ss_dssp             SCGGGTGGGGCS-SEEEECSSSEEEECCTTCCE
T ss_pred             cccCCCCCCCCc-CEEEcCCCCEEEECCCCCEE
Confidence            689987778898 89999999999999999976

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.46  E-value=3.8e-08  Score=48.68  Aligned_cols=36  Identities=28%  Similarity=0.897  Sum_probs=30.1

Q ss_pred             cccCCCCCCCCCCC-CceeecCCCceeeCCCCcccCCCCCCCc
Q psy7854          75 ANHHTTENPGICTN-GACENLMGTYRCICNPGYEGDPTGKLCS  116 (153)
Q Consensus        75 ~~~~C~~~~~~C~~-~~C~~~~g~~~C~C~~g~~~~~~g~~C~  116 (153)
                      |+|+|..  +||.+ ++|++..++|.|.|++||    .|..|+
T Consensus         1 D~d~C~~--~PC~ngg~C~~~~~~y~C~C~~g~----~G~~Ce   37 (37)
T d2c4fl1           1 DGDQCAS--SPCQNGGSCKDQLQSYICFCLPAF----EGRNCE   37 (37)
T ss_dssp             TCCGGGG--CCCCTTCEEEEETTEEEEECCTTE----ESTTSC
T ss_pred             CcccCCC--CCCCCCCEEECCCCCeEEECCCCC----cCCCCC
Confidence            5789987  89974 599999999999999999    555653

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.44  E-value=3.4e-08  Score=51.14  Aligned_cols=32  Identities=19%  Similarity=0.379  Sum_probs=23.6

Q ss_pred             CccccCCCCC---CCCCeeeecCCCcEEecCCCCCc
Q psy7854         118 QNECLMDVMI---CSGGTCKNTPGSFQSNFQDSSPI  150 (153)
Q Consensus       118 i~~C~~~~~~---C~~~~C~~~~g~~~C~C~~g~~~  150 (153)
                      ||||+...+.   |. +.|+|++|+|+|.|++||.+
T Consensus         1 IdEC~~~~~~~~~C~-~~C~Nt~gsy~C~C~~Gy~L   35 (45)
T d1nt0a3           1 VDECRTSLGDSVPCD-HYCHNYLGGYYCSCRVGYIL   35 (45)
T ss_dssp             CCTTC-------CCS-SEEEEETTEEEEECCTTEEE
T ss_pred             CcCCccCCCCcCCCC-CEeecCCCCEEEeCCCCCEE
Confidence            6888754433   54 89999999999999999964

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.44  E-value=9.4e-08  Score=47.76  Aligned_cols=35  Identities=34%  Similarity=0.948  Sum_probs=29.8

Q ss_pred             ccCCCCCCCCCCC-CceeecCCCceeeCCCCcccCCCCCCCc
Q psy7854          76 NHHTTENPGICTN-GACENLMGTYRCICNPGYEGDPTGKLCS  116 (153)
Q Consensus        76 ~~~C~~~~~~C~~-~~C~~~~g~~~C~C~~g~~~~~~g~~C~  116 (153)
                      ||+|..  .||++ ++|++..++|+|.|++||    .|..|+
T Consensus         1 Id~C~~--~PC~n~g~C~~~~~~y~C~C~~G~----~G~~Ce   36 (39)
T d2vj3a2           1 VNECVS--NPCQNDATCLDQIGEFQCICMPGY----EGVHCE   36 (39)
T ss_dssp             CCTTTT--CCCCSSCEEEECSSCEEEECCTTE----ESSSSC
T ss_pred             CcCCcC--CCCCCCCEEECCCCCEEEeCCCCC----ccCcCe
Confidence            688987  89975 499999999999999999    666664

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.43  E-value=4.6e-08  Score=50.63  Aligned_cols=32  Identities=22%  Similarity=0.458  Sum_probs=26.0

Q ss_pred             CccccCCCCC---CCCCeeeecCCCcEEecCCCCCc
Q psy7854         118 QNECLMDVMI---CSGGTCKNTPGSFQSNFQDSSPI  150 (153)
Q Consensus       118 i~~C~~~~~~---C~~~~C~~~~g~~~C~C~~g~~~  150 (153)
                      ||||......   |. +.|+|++|+|+|.|++||.+
T Consensus         1 IdEC~~~~~~~~~C~-~~C~Nt~Gsy~C~C~~Gy~l   35 (45)
T d1szba2           1 IDECQVAPGEAPTCD-HHCHNHLGGFYCSCRAGYVL   35 (45)
T ss_dssp             CCTTCCCTTSCCSSS-SEEEEETTEEEEECCTTEEE
T ss_pred             CcCCcCCCCCCCCCC-CCCccCCCCeEEECCCCCeE
Confidence            6888765543   43 79999999999999999964

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=3.2e-08  Score=49.81  Aligned_cols=38  Identities=26%  Similarity=0.737  Sum_probs=31.9

Q ss_pred             ccCCCCCCCCCCCCceeecCCCceeeCCCCcccCCCCCCC
Q psy7854          76 NHHTTENPGICTNGACENLMGTYRCICNPGYEGDPTGKLC  115 (153)
Q Consensus        76 ~~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~g~~C  115 (153)
                      +|||....+.|.+ .|++++++|+|.|++||.+. +++.|
T Consensus         2 ~neC~~~nggC~h-~C~n~~g~~~C~C~~Gy~L~-d~~tC   39 (40)
T d3bpse1           2 TNECLDNNGGCSH-VCNDLKIGYECLCPDGFQLV-AQRRC   39 (40)
T ss_dssp             SCGGGTGGGGCSS-EEEECSSSEEEECCTTCCEE-TTTEE
T ss_pred             cccCCCCCCCCcC-EEEcCCCCEEEECCCCCEEC-CCCcC
Confidence            5788877778987 99999999999999999884 55554

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.34  E-value=1.9e-07  Score=45.52  Aligned_cols=32  Identities=22%  Similarity=0.366  Sum_probs=28.0

Q ss_pred             ccccCCCCCCCC-CeeeecCCCcEEecCCCCCccc
Q psy7854         119 NECLMDVMICSG-GTCKNTPGSFQSNFQDSSPILK  152 (153)
Q Consensus       119 ~~C~~~~~~C~~-~~C~~~~g~~~C~C~~g~~~~~  152 (153)
                      |+|  .+++|.| ++|++..++|.|.|++||.+.+
T Consensus         1 d~C--~~~PC~ngg~C~~~~~~y~C~C~~g~~G~~   33 (35)
T d2vj3a3           1 DEC--ASSPCLHNGRCLDKINEFQCECPTGFTGHL   33 (35)
T ss_dssp             CTT--TTCCSTTTCEEEECSSCEEEECCTTEESSS
T ss_pred             CCC--CCCCCCCCcEEECCCCCeEEECCCCCCCCC
Confidence            578  6899997 9999999999999999997653

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.29  E-value=2.3e-07  Score=47.05  Aligned_cols=32  Identities=25%  Similarity=0.333  Sum_probs=26.0

Q ss_pred             ccccCC-CCCCCCCeeeecCCCcEEecCCCCCcc
Q psy7854         119 NECLMD-VMICSGGTCKNTPGSFQSNFQDSSPIL  151 (153)
Q Consensus       119 ~~C~~~-~~~C~~~~C~~~~g~~~C~C~~g~~~~  151 (153)
                      |||... .+.|. ..|+|++|+|+|.|++||.+.
T Consensus         1 dEC~~~~~~~C~-~~C~n~~Gsy~C~C~~Gy~L~   33 (42)
T d1nzia2           1 NECTDFVDVPCS-HFCNNFIGGYFCSCPPEYFLH   33 (42)
T ss_dssp             CTTTC-CCCCSS-SEEEEETTEEEEECCTTCEEC
T ss_pred             CCCCCCCCcCCC-CEeecCCCCEEEeCCCCCEEC
Confidence            578643 46787 899999999999999999753

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=2.3e-07  Score=46.31  Aligned_cols=31  Identities=19%  Similarity=0.535  Sum_probs=27.5

Q ss_pred             ccccCCCCCCCC-CeeeecCCCcEEecCCCCCcc
Q psy7854         119 NECLMDVMICSG-GTCKNTPGSFQSNFQDSSPIL  151 (153)
Q Consensus       119 ~~C~~~~~~C~~-~~C~~~~g~~~C~C~~g~~~~  151 (153)
                      |+|  .+++|.| ++|++..++|.|.|++||.+.
T Consensus         1 D~C--~~~PC~ngg~C~~~~~~y~C~C~~G~~G~   32 (39)
T d1xkba1           1 DQC--ETSPCQNQGKCKDGLGEYTCTCLEGFEGK   32 (39)
T ss_dssp             CTT--TTCCCCSSCEECCCSSSCCEECCTTEETT
T ss_pred             CcC--CCCCCCCCcEEECCCCCEEEECCCCCCcC
Confidence            578  6799997 999999999999999999764

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.19  E-value=3.8e-07  Score=48.26  Aligned_cols=40  Identities=25%  Similarity=0.526  Sum_probs=34.8

Q ss_pred             CCCCCCCCCceeecCCCceeeCCCCcccCCCCCCCccCccc
Q psy7854          81 ENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNEC  121 (153)
Q Consensus        81 ~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~g~~C~~i~~C  121 (153)
                      ...+.|.+ .|++..++|.|.|+.||.+.++++.|++++++
T Consensus         3 ~~NGgC~h-~C~~~~~~~~C~C~~Gy~L~~D~~tC~~~~~~   42 (51)
T d1kigl_           3 LDNGGCDQ-FCREERSEVRCSCAHGYVLGDDSKSCVSTERF   42 (51)
T ss_dssp             TTTTSSSS-CCCEETTEECCCCCTTEEECTTSSCEEECSSS
T ss_pred             CCCCCccc-EeEcCCCcEEeEcCCCCEECCCCCccccCCcc
Confidence            33467876 89999999999999999999999999998876

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=8e-07  Score=43.20  Aligned_cols=34  Identities=29%  Similarity=0.893  Sum_probs=27.9

Q ss_pred             cCCCCCCCCCCC-CceeecCCCceeeCCCCcccCCCCCCCc
Q psy7854          77 HHTTENPGICTN-GACENLMGTYRCICNPGYEGDPTGKLCS  116 (153)
Q Consensus        77 ~~C~~~~~~C~~-~~C~~~~g~~~C~C~~g~~~~~~g~~C~  116 (153)
                      |+|..  +||++ ++|++..++|.|.|++||    .|..|+
T Consensus         1 d~C~~--~PC~ngg~C~~~~~~y~C~C~~g~----~G~~CE   35 (35)
T d2vj3a3           1 DECAS--SPCLHNGRCLDKINEFQCECPTGF----TGHLCQ   35 (35)
T ss_dssp             CTTTT--CCSTTTCEEEECSSCEEEECCTTE----ESSSSC
T ss_pred             CCCCC--CCCCCCcEEECCCCCeEEECCCCC----CCCCcC
Confidence            57776  89975 599999999999999999    556654

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.17  E-value=7.6e-07  Score=44.33  Aligned_cols=34  Identities=35%  Similarity=0.946  Sum_probs=28.5

Q ss_pred             cCCCCCCCCCCC-CceeecCCCceeeCCCCcccCCCCCCCc
Q psy7854          77 HHTTENPGICTN-GACENLMGTYRCICNPGYEGDPTGKLCS  116 (153)
Q Consensus        77 ~~C~~~~~~C~~-~~C~~~~g~~~C~C~~g~~~~~~g~~C~  116 (153)
                      |+|..  +||+| +.|++..++|.|.|++||    .|..|+
T Consensus         1 D~C~~--~PC~ngg~C~~~~~~y~C~C~~G~----~G~~Ce   35 (39)
T d1xkba1           1 DQCET--SPCQNQGKCKDGLGEYTCTCLEGF----EGKNCE   35 (39)
T ss_dssp             CTTTT--CCCCSSCEECCCSSSCCEECCTTE----ETTTTC
T ss_pred             CcCCC--CCCCCCcEEECCCCCEEEECCCCC----CcCcCe
Confidence            57876  89975 599999999999999999    666664

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.10  E-value=8e-07  Score=46.25  Aligned_cols=35  Identities=29%  Similarity=0.904  Sum_probs=30.6

Q ss_pred             ccCCCCCCCCCCCCceeecCCCceeeCCCCcccCCCCCCCc
Q psy7854          76 NHHTTENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCS  116 (153)
Q Consensus        76 ~~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~g~~C~  116 (153)
                      .|+|..  +||.|++|.+..++|.|.|++||    .|..|+
T Consensus         8 ~~~C~~--~PC~nG~C~~~~~~y~C~C~~G~----~G~~Ce   42 (48)
T d1autl1           8 EHPCAS--LCCGHGTCIDGIGSFSCDCRSGW----EGRFCQ   42 (48)
T ss_dssp             CCSSSS--TTTTSEEECCCSSCCCEEECTTE----ESTTSC
T ss_pred             CCcccC--CCCCCCEEECCCCCCeEeCCCCC----cCCCcc
Confidence            567877  89988999999999999999999    677774

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.08  E-value=1e-06  Score=46.33  Aligned_cols=40  Identities=30%  Similarity=0.583  Sum_probs=33.6

Q ss_pred             CCCCCCCCCCceeecCCCceeeCCCCcccCCCCCCCccCcc
Q psy7854          80 TENPGICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNE  120 (153)
Q Consensus        80 ~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~g~~C~~i~~  120 (153)
                      +...+.|.+ .|++++++|+|.|+.||.+.++++.|+++++
T Consensus         3 ~~~NGgC~~-~C~~~~g~~~C~C~~Gy~L~~D~~tC~~~~~   42 (50)
T d1autl2           3 SLDNGGCTH-YCLEEVGWRRCSCAPGYKLGDDLLQCHPAVK   42 (50)
T ss_dssp             SSGGGGCSS-EEEECSSSEEEECCTTEEECTTSSCEEECSS
T ss_pred             CCCCCCccc-EeecCCCCeEEECCCCCEECCCCCccccCCC
Confidence            333356876 8999999999999999999999999987754

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.06  E-value=1.6e-07  Score=47.13  Aligned_cols=31  Identities=26%  Similarity=0.818  Sum_probs=26.0

Q ss_pred             CCC-CCCceeecCCCceeeCCCCcccCCCCCCCc
Q psy7854          84 GIC-TNGACENLMGTYRCICNPGYEGDPTGKLCS  116 (153)
Q Consensus        84 ~~C-~~~~C~~~~g~~~C~C~~g~~~~~~g~~C~  116 (153)
                      +.| .++.|.|++++|.|.|++||.+  +|..|.
T Consensus         7 ~~C~~~A~C~Nt~Gsy~C~C~~Gy~G--dG~~C~   38 (40)
T d1gl4a2           7 HQCSVHAECRDYATGFCCRCVANYTG--NGRQCV   38 (40)
T ss_dssp             GGSCTTEEEEECSSCEEEEECTTEEE--CSSSEE
T ss_pred             CCCCCCCEeecCCCCeEeECCCCCcC--CCCEee
Confidence            566 4679999999999999999988  676664

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.04  E-value=2.2e-07  Score=46.56  Aligned_cols=27  Identities=15%  Similarity=0.258  Sum_probs=23.2

Q ss_pred             CCCCCC-CCeeeecCCCcEEecCCCCCc
Q psy7854         124 DVMICS-GGTCKNTPGSFQSNFQDSSPI  150 (153)
Q Consensus       124 ~~~~C~-~~~C~~~~g~~~C~C~~g~~~  150 (153)
                      ..+.|+ ++.|+|++|+|.|.|++||.+
T Consensus         5 ~~~~C~~~A~C~Nt~Gsy~C~C~~Gy~G   32 (40)
T d1gl4a2           5 NRHQCSVHAECRDYATGFCCRCVANYTG   32 (40)
T ss_dssp             HGGGSCTTEEEEECSSCEEEEECTTEEE
T ss_pred             CCCCCCCCCEeecCCCCeEeECCCCCcC
Confidence            456777 499999999999999999964

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.02  E-value=8.5e-07  Score=46.85  Aligned_cols=37  Identities=27%  Similarity=0.603  Sum_probs=32.6

Q ss_pred             CCCCCCceeecCCCceeeCCCCcccCCCCCCCccCccc
Q psy7854          84 GICTNGACENLMGTYRCICNPGYEGDPTGKLCSDQNEC  121 (153)
Q Consensus        84 ~~C~~~~C~~~~g~~~C~C~~g~~~~~~g~~C~~i~~C  121 (153)
                      +.|++ .|.+.+++|.|.|+.||.+.++++.|++++++
T Consensus         8 GgC~h-~C~n~~g~~~C~C~~Gy~L~~D~~tC~~~~~~   44 (51)
T d2p3ua1           8 GDCDQ-FCHEEQNSVVCSCARGYTLADNGKACIPTGPY   44 (51)
T ss_dssp             GGCSS-EEEEETTEEEEECCTTEEECTTSSCEEESSSS
T ss_pred             CCccc-EeecCCCCeEeEcCCCCEECCCCCccccCCcc
Confidence            56776 89999999999999999999999999887653

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.02  E-value=1e-06  Score=45.82  Aligned_cols=33  Identities=24%  Similarity=0.478  Sum_probs=28.6

Q ss_pred             cCccccCCCCCCCCCeeeecCCCcEEecCCCCCcc
Q psy7854         117 DQNECLMDVMICSGGTCKNTPGSFQSNFQDSSPIL  151 (153)
Q Consensus       117 ~i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~  151 (153)
                      ..++|  ..++|.|++|++..++|.|.|++||.+.
T Consensus         7 ~~~~C--~~~PC~nG~C~~~~~~y~C~C~~G~~G~   39 (48)
T d1autl1           7 LEHPC--ASLCCGHGTCIDGIGSFSCDCRSGWEGR   39 (48)
T ss_dssp             SCCSS--SSTTTTSEEECCCSSCCCEEECTTEEST
T ss_pred             CCCcc--cCCCCCCCEEECCCCCCeEeCCCCCcCC
Confidence            35688  6799988999999999999999999754

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=8e-07  Score=44.29  Aligned_cols=31  Identities=26%  Similarity=0.519  Sum_probs=26.9

Q ss_pred             ccccCCCCCCCC-CeeeecCCCcEEecCCCCCcc
Q psy7854         119 NECLMDVMICSG-GTCKNTPGSFQSNFQDSSPIL  151 (153)
Q Consensus       119 ~~C~~~~~~C~~-~~C~~~~g~~~C~C~~g~~~~  151 (153)
                      +.|  .+++|.| ++|++..++|.|.|++||.+.
T Consensus         2 ~~C--~~~pC~ngg~C~~~~~~~~C~C~~g~~G~   33 (39)
T d1g1ta2           2 AAC--TNTSCSGHGECVETINNYTCKCDPGFSGL   33 (39)
T ss_dssp             CCC--CTTGGGGSEEEEEETTEEEEEECTTEEST
T ss_pred             Ccc--cCCcCCCCcEEECCCCCEEEeCCCCCcCc
Confidence            357  6789986 999999999999999999765

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.92  E-value=6.3e-06  Score=39.15  Aligned_cols=30  Identities=33%  Similarity=0.650  Sum_probs=26.8

Q ss_pred             ccccCCCCCCCCCeeeecCCCcEEecCCCCC
Q psy7854         119 NECLMDVMICSGGTCKNTPGSFQSNFQDSSP  149 (153)
Q Consensus       119 ~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~  149 (153)
                      |||. ..++|.|++|.|..|+|.|.|..||.
T Consensus         2 dECs-ignpCGnGTCtNviGgFec~C~~GFe   31 (39)
T d1emoa2           2 DECS-VGNPCGNGTCKNVIGGFECTCEEGFE   31 (39)
T ss_dssp             CGGG-TTCSSSSSCEEECSSSEEECCSSSSC
T ss_pred             Cccc-cCCccCCceeeecccceEEeecCCcC
Confidence            6786 45899999999999999999999996

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=1.8e-06  Score=43.17  Aligned_cols=31  Identities=26%  Similarity=0.424  Sum_probs=26.7

Q ss_pred             ccccCCCCCCCC-CeeeecCCCcEEecCCCCCcc
Q psy7854         119 NECLMDVMICSG-GTCKNTPGSFQSNFQDSSPIL  151 (153)
Q Consensus       119 ~~C~~~~~~C~~-~~C~~~~g~~~C~C~~g~~~~  151 (153)
                      +.|  .+++|.| +.|++..++|.|.|++||.+.
T Consensus         2 ~~C--~~~pC~ngg~C~~~~~~y~C~C~~g~~G~   33 (40)
T d1g1sa2           2 ASC--QDMSCSKQGECLETIGNYTCSCYPGFYGP   33 (40)
T ss_dssp             CCC--CTTGGGGSEEEEECSSSEEEEECTTEEST
T ss_pred             Ccc--cCCcCCCCcEEECCCCCeEEeCCCCccCC
Confidence            356  6789986 999999999999999999764

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=5.4e-06  Score=39.39  Aligned_cols=32  Identities=31%  Similarity=0.915  Sum_probs=27.7

Q ss_pred             cCCCCCCCCCCCCceeecCCCceeeCCCCcccC
Q psy7854          77 HHTTENPGICTNGACENLMGTYRCICNPGYEGD  109 (153)
Q Consensus        77 ~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~  109 (153)
                      |||+.. ++|.+++|.|..|.|.|.|..||...
T Consensus         2 dECsig-npCGnGTCtNviGgFec~C~~GFepg   33 (39)
T d1emoa2           2 DECSVG-NPCGNGTCKNVIGGFECTCEEGFEPG   33 (39)
T ss_dssp             CGGGTT-CSSSSSCEEECSSSEEECCSSSSCCC
T ss_pred             CccccC-CccCCceeeecccceEEeecCCcCCC
Confidence            577764 79999999999999999999999653

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.86  E-value=3.3e-06  Score=42.18  Aligned_cols=36  Identities=31%  Similarity=0.828  Sum_probs=29.3

Q ss_pred             cCCCCCCCCCC-CCceeecCCCceeeCCCCcccCCCCCCCccC
Q psy7854          77 HHTTENPGICT-NGACENLMGTYRCICNPGYEGDPTGKLCSDQ  118 (153)
Q Consensus        77 ~~C~~~~~~C~-~~~C~~~~g~~~C~C~~g~~~~~~g~~C~~i  118 (153)
                      +.|..  +||. ++.|+...++|.|.|++||    .|..|+.+
T Consensus         2 ~~C~~--~pC~ngg~C~~~~~~y~C~C~~g~----~G~~Ce~~   38 (40)
T d1g1sa2           2 ASCQD--MSCSKQGECLETIGNYTCSCYPGF----YGPECEYV   38 (40)
T ss_dssp             CCCCT--TGGGGSEEEEECSSSEEEEECTTE----ESTTSCEE
T ss_pred             CcccC--CcCCCCcEEECCCCCeEEeCCCCc----cCCCCCCC
Confidence            45666  8996 4599999999999999999    67777654

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.73  E-value=5.2e-06  Score=41.21  Aligned_cols=34  Identities=32%  Similarity=0.954  Sum_probs=28.0

Q ss_pred             cCCCCCCCCCC-CCceeecCCCceeeCCCCcccCCCCCCCc
Q psy7854          77 HHTTENPGICT-NGACENLMGTYRCICNPGYEGDPTGKLCS  116 (153)
Q Consensus        77 ~~C~~~~~~C~-~~~C~~~~g~~~C~C~~g~~~~~~g~~C~  116 (153)
                      +.|..  +||+ +++|++..++|.|.|++||    .|..|+
T Consensus         2 ~~C~~--~pC~ngg~C~~~~~~~~C~C~~g~----~G~~Ce   36 (39)
T d1g1ta2           2 AACTN--TSCSGHGECVETINNYTCKCDPGF----SGLKCE   36 (39)
T ss_dssp             CCCCT--TGGGGSEEEEEETTEEEEEECTTE----ESTTSC
T ss_pred             CcccC--CcCCCCcEEECCCCCEEEeCCCCC----cCcCcC
Confidence            45666  8997 4599999999999999999    666775

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=97.66  E-value=9.7e-06  Score=40.85  Aligned_cols=32  Identities=19%  Similarity=0.305  Sum_probs=26.7

Q ss_pred             CccccCCCCCCCC-Ceeeec-CCCcEEecCC-CCCcc
Q psy7854         118 QNECLMDVMICSG-GTCKNT-PGSFQSNFQD-SSPIL  151 (153)
Q Consensus       118 i~~C~~~~~~C~~-~~C~~~-~g~~~C~C~~-g~~~~  151 (153)
                      ||+|  ..++|.| ++|++. .++|.|.|+. ||.+.
T Consensus         2 id~C--~~nPC~ngG~C~~~~~~~y~C~C~~~G~~G~   36 (42)
T d1q4ga2           2 VNPC--CYYPCQHQGICVRFGLDRYQCDCTRTGYSGP   36 (42)
T ss_dssp             CCGG--GGCCCCTTCEEEEETTTEEEEECTTSSEETT
T ss_pred             CccC--cCCCCCCCCEeeeCCCCCEEEECCCCCcCCc
Confidence            6889  6799997 999875 6789999986 89764

>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=1.4e-05  Score=41.80  Aligned_cols=39  Identities=23%  Similarity=0.405  Sum_probs=30.1

Q ss_pred             cCCCCCCCCCCCCcee------ecCCCceeeCCCCcccCCCCCCCc
Q psy7854          77 HHTTENPGICTNGACE------NLMGTYRCICNPGYEGDPTGKLCS  116 (153)
Q Consensus        77 ~~C~~~~~~C~~~~C~------~~~g~~~C~C~~g~~~~~~g~~C~  116 (153)
                      |||....+.|++ .|+      +..++|.|.|+.||.+.++++.|.
T Consensus         5 neC~~~NGGC~h-~Cl~~p~~~n~~~~y~C~C~~G~~L~~D~~tCi   49 (50)
T d1ijqa2           5 ERTTLSNGGCQY-LCLPAPQINPHSPKFTCACPDGMLLARDMRSCL   49 (50)
T ss_dssp             SSSSSGGGGCSS-EEEECCCCSTTCCSEEEECCTTCEECTTSSCEE
T ss_pred             cccCCCCCCCcC-ccCCCcCcccCCCCEEEeCCCCCEECCCCCccc
Confidence            466655567877 886      445799999999999988887764

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.57  E-value=4.1e-05  Score=38.25  Aligned_cols=28  Identities=18%  Similarity=0.272  Sum_probs=23.3

Q ss_pred             CCCCCCC-Ceeeec--CCCcEEecCCCCCcc
Q psy7854         124 DVMICSG-GTCKNT--PGSFQSNFQDSSPIL  151 (153)
Q Consensus       124 ~~~~C~~-~~C~~~--~g~~~C~C~~g~~~~  151 (153)
                      .+++|.| ++|+..  .++|.|.|++||.+.
T Consensus         2 ~~nPC~ngG~C~~~~~~~~y~C~C~~g~~G~   32 (41)
T d1tpga1           2 SEPRCFNGGTCQQALYFSDFVCQCPEGFAGK   32 (41)
T ss_dssp             SSCCSCTTCEEEEESSSSCEEEECCTTCBSS
T ss_pred             cCCCCCCCCEEecCCCCCCeEECCCCCCCCC
Confidence            5789997 999875  467999999999865

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=97.56  E-value=1.9e-05  Score=39.71  Aligned_cols=35  Identities=29%  Similarity=0.768  Sum_probs=27.7

Q ss_pred             ccCCCCCCCCCCC-Cceeec-CCCceeeCCC-CcccCCCCCCCc
Q psy7854          76 NHHTTENPGICTN-GACENL-MGTYRCICNP-GYEGDPTGKLCS  116 (153)
Q Consensus        76 ~~~C~~~~~~C~~-~~C~~~-~g~~~C~C~~-g~~~~~~g~~C~  116 (153)
                      +|+|..  ++|+| ++|+.. .++|.|.|.. ||    .|..|+
T Consensus         2 id~C~~--nPC~ngG~C~~~~~~~y~C~C~~~G~----~G~~Ce   39 (42)
T d1q4ga2           2 VNPCCY--YPCQHQGICVRFGLDRYQCDCTRTGY----SGPNCT   39 (42)
T ss_dssp             CCGGGG--CCCCTTCEEEEETTTEEEEECTTSSE----ETTTTC
T ss_pred             CccCcC--CCCCCCCEeeeCCCCCEEEECCCCCc----CCcCcC
Confidence            578877  89975 599875 6889999986 89    566664

>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.50  E-value=3.1e-05  Score=41.54  Aligned_cols=42  Identities=24%  Similarity=0.483  Sum_probs=33.2

Q ss_pred             CCCCCCCCCCCceeecCC-CceeeCCCCcccCCCCCCCccCccc
Q psy7854          79 TTENPGICTNGACENLMG-TYRCICNPGYEGDPTGKLCSDQNEC  121 (153)
Q Consensus        79 C~~~~~~C~~~~C~~~~g-~~~C~C~~g~~~~~~g~~C~~i~~C  121 (153)
                      |+...+.|++ .|++.++ +|.|.|..||.+.++++.|+++++.
T Consensus         3 C~~~NGgC~h-~C~~~~~~~~~C~C~~Gy~L~~D~~tC~~~~~f   45 (57)
T d1rfnb_           3 CNIKNGRCEQ-FCKNSADNKVVCSCTEGYRLAENQKSCEPAVPF   45 (57)
T ss_dssp             TTGGGGGCSS-EEEECTTSCEEEECCTTEEECTTSSSEEECSSS
T ss_pred             cCCCCCCccc-EeeeCCCCCeEeECCCCCEECCCCCccccCCCc
Confidence            3333356776 8999864 8999999999999999999887653

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.49  E-value=6.6e-05  Score=37.46  Aligned_cols=32  Identities=34%  Similarity=0.942  Sum_probs=24.9

Q ss_pred             CCCCCC-ceeec--CCCceeeCCCCcccCCCCCCCc-cCc
Q psy7854          84 GICTNG-ACENL--MGTYRCICNPGYEGDPTGKLCS-DQN  119 (153)
Q Consensus        84 ~~C~~~-~C~~~--~g~~~C~C~~g~~~~~~g~~C~-~i~  119 (153)
                      +||.|+ +|+..  ..+|.|.|++||    .|..|+ +++
T Consensus         4 nPC~ngG~C~~~~~~~~y~C~C~~g~----~G~~Ce~~~~   39 (41)
T d1tpga1           4 PRCFNGGTCQQALYFSDFVCQCPEGF----AGKSCEIDTR   39 (41)
T ss_dssp             CCSCTTCEEEEESSSSCEEEECCTTC----BSSSCCBCSS
T ss_pred             CCCCCCCEEecCCCCCCeEECCCCCC----CCCCcCcCcC
Confidence            789764 99875  467999999999    677884 444

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.48  E-value=3.3e-05  Score=38.59  Aligned_cols=31  Identities=19%  Similarity=0.321  Sum_probs=25.3

Q ss_pred             ccccCCCCCCCC-Ceeeec-CCCcEEecC-CCCCcc
Q psy7854         119 NECLMDVMICSG-GTCKNT-PGSFQSNFQ-DSSPIL  151 (153)
Q Consensus       119 ~~C~~~~~~C~~-~~C~~~-~g~~~C~C~-~g~~~~  151 (153)
                      |+|  .+++|.| ++|++. .++|+|.|+ +||.+.
T Consensus         2 d~C--~~~PC~ngG~C~~~~~~~y~C~C~~~gy~G~   35 (41)
T d1cvua2           2 NPC--CSNPCQNRGECMSTGFDQYKCDCTRTGFYGE   35 (41)
T ss_dssp             CTT--TTCCCCTTCEEEEEETTEEEEECTTSSEETT
T ss_pred             CcC--cCCCCCCCCEEEECCCCCEEEeCcCCCcCCc
Confidence            578  6799997 999875 678999997 699764

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.33  E-value=2.1e-05  Score=43.24  Aligned_cols=34  Identities=18%  Similarity=0.346  Sum_probs=26.9

Q ss_pred             cCccccCCCCCCCC-Ceee-----ecCCCcEEecCCCCCccc
Q psy7854         117 DQNECLMDVMICSG-GTCK-----NTPGSFQSNFQDSSPILK  152 (153)
Q Consensus       117 ~i~~C~~~~~~C~~-~~C~-----~~~g~~~C~C~~g~~~~~  152 (153)
                      +.++|  ..++|.| ++|.     +..++|.|.|++||.+.+
T Consensus         5 ~c~ec--~~~~C~NgG~C~~~~~~~~~~~y~C~C~~gy~G~~   44 (63)
T d1haea_           5 KCAEK--EKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGAR   44 (63)
T ss_dssp             ECCHH--HHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTT
T ss_pred             cCCCC--cCCcCCCCCEEeecccccCCCCEEeECCCCCCCCC
Confidence            45677  5789997 9995     456789999999998653

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.32  E-value=8.9e-05  Score=36.95  Aligned_cols=34  Identities=29%  Similarity=0.859  Sum_probs=26.4

Q ss_pred             cCCCCCCCCCCC-Cceeec-CCCceeeCC-CCcccCCCCCCCc
Q psy7854          77 HHTTENPGICTN-GACENL-MGTYRCICN-PGYEGDPTGKLCS  116 (153)
Q Consensus        77 ~~C~~~~~~C~~-~~C~~~-~g~~~C~C~-~g~~~~~~g~~C~  116 (153)
                      |+|..  +||+| ++|++. .++|+|.|+ +||    .|..|+
T Consensus         2 d~C~~--~PC~ngG~C~~~~~~~y~C~C~~~gy----~G~~Ce   38 (41)
T d1cvua2           2 NPCCS--NPCQNRGECMSTGFDQYKCDCTRTGF----YGENCT   38 (41)
T ss_dssp             CTTTT--CCCCTTCEEEEEETTEEEEECTTSSE----ETTTTC
T ss_pred             CcCcC--CCCCCCCEEEECCCCCEEEeCcCCCc----CCcCcC
Confidence            57776  89975 599875 678999996 699    666665

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.18  E-value=7.5e-05  Score=38.91  Aligned_cols=29  Identities=17%  Similarity=0.305  Sum_probs=23.4

Q ss_pred             ccCCCCCCCCCeeeecCCCcEEecCCCCCc
Q psy7854         121 CLMDVMICSGGTCKNTPGSFQSNFQDSSPI  150 (153)
Q Consensus       121 C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~  150 (153)
                      |....+.|. ..|++++++|+|.|++||.+
T Consensus         2 C~~~NGgC~-~~C~~~~g~~~C~C~~Gy~L   30 (50)
T d1autl2           2 CSLDNGGCT-HYCLEEVGWRRCSCAPGYKL   30 (50)
T ss_dssp             SSSGGGGCS-SEEEECSSSEEEECCTTEEE
T ss_pred             CCCCCCCcc-cEeecCCCCeEEECCCCCEE
Confidence            333445676 89999999999999999975

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.15  E-value=5.6e-05  Score=39.57  Aligned_cols=29  Identities=17%  Similarity=0.360  Sum_probs=23.7

Q ss_pred             ccCCCCCCCCCeeeecCCCcEEecCCCCCc
Q psy7854         121 CLMDVMICSGGTCKNTPGSFQSNFQDSSPI  150 (153)
Q Consensus       121 C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~  150 (153)
                      |....+.|. ..|++++++|+|.|++||.+
T Consensus         3 C~~~NGgC~-h~C~n~~g~~~C~C~~Gy~L   31 (51)
T d2p3ua1           3 CSLDNGDCD-QFCHEEQNSVVCSCARGYTL   31 (51)
T ss_dssp             GGTGGGGCS-SEEEEETTEEEEECCTTEEE
T ss_pred             cCCCCCCcc-cEeecCCCCeEeEcCCCCEE
Confidence            444456677 89999999999999999975

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.01  E-value=0.00045  Score=36.25  Aligned_cols=29  Identities=17%  Similarity=0.154  Sum_probs=23.3

Q ss_pred             CCCCCCC-Ceeeec--CCCcEEecCCCCCccc
Q psy7854         124 DVMICSG-GTCKNT--PGSFQSNFQDSSPILK  152 (153)
Q Consensus       124 ~~~~C~~-~~C~~~--~g~~~C~C~~g~~~~~  152 (153)
                      ..++|.| ++|+..  ...|.|.|++||.+.+
T Consensus        10 ~~~~C~NgG~C~~~~~~~~~~C~C~~gy~G~~   41 (53)
T d3egfa_          10 YDGYCLNGGVCMHIESLDSYTCNCVIGYSGDR   41 (53)
T ss_dssp             SSCCSCSSCEEEEESSSSCEEEECCTTCCSSS
T ss_pred             CCCCCCCCcEeeccCCCCCeEeECCCCCcCCC
Confidence            4678987 999753  4579999999998764

>d2bz6l1 g.3.11.1 (L:90-142) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.93  E-value=0.00021  Score=37.58  Aligned_cols=34  Identities=29%  Similarity=0.696  Sum_probs=28.7

Q ss_pred             CCCCCCceeecCC-CceeeCCCCcccCCCCCCCccC
Q psy7854          84 GICTNGACENLMG-TYRCICNPGYEGDPTGKLCSDQ  118 (153)
Q Consensus        84 ~~C~~~~C~~~~g-~~~C~C~~g~~~~~~g~~C~~i  118 (153)
                      +.|.+ .|.+..+ +|.|.|+.||.+.++++.|...
T Consensus         7 GGC~h-~C~~~~~~~~~C~C~~Gy~L~~D~~tC~~~   41 (53)
T d2bz6l1           7 GGCEQ-YCSDHTGTKRSCRCHEGYSLLADGVSCTPT   41 (53)
T ss_dssp             GGCSS-EEEEETTTEEEEECCTTEEECTTSSCEEEC
T ss_pred             CCCcC-EeeeCCCCCEEeECCCCCEECCCCCcccCC
Confidence            55766 8998876 5889999999999999999765

>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.91  E-value=0.00024  Score=36.89  Aligned_cols=32  Identities=13%  Similarity=0.157  Sum_probs=24.1

Q ss_pred             ccccCCCCCCCCCeeee------cCCCcEEecCCCCCcc
Q psy7854         119 NECLMDVMICSGGTCKN------TPGSFQSNFQDSSPIL  151 (153)
Q Consensus       119 ~~C~~~~~~C~~~~C~~------~~g~~~C~C~~g~~~~  151 (153)
                      +||....+.|. ..|+.      +.++|.|.|+.||.+.
T Consensus         5 neC~~~NGGC~-h~Cl~~p~~~n~~~~y~C~C~~G~~L~   42 (50)
T d1ijqa2           5 ERTTLSNGGCQ-YLCLPAPQINPHSPKFTCACPDGMLLA   42 (50)
T ss_dssp             SSSSSGGGGCS-SEEEECCCCSTTCCSEEEECCTTCEEC
T ss_pred             cccCCCCCCCc-CccCCCcCcccCCCCEEEeCCCCCEEC
Confidence            56665556787 88974      4578999999999753

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

Probab=96.83  E-value=9.1e-05  Score=38.74  Aligned_cols=28  Identities=11%  Similarity=0.242  Sum_probs=23.0

Q ss_pred             cCCCCCCCCCeeeecCCCcEEecCCCCCc
Q psy7854         122 LMDVMICSGGTCKNTPGSFQSNFQDSSPI  150 (153)
Q Consensus       122 ~~~~~~C~~~~C~~~~g~~~C~C~~g~~~  150 (153)
                      ....+.|. ..|++++++|+|.|++||.+
T Consensus         2 ~~~NGgC~-h~C~~~~~~~~C~C~~Gy~L   29 (51)
T d1kigl_           2 SLDNGGCD-QFCREERSEVRCSCAHGYVL   29 (51)
T ss_dssp             CTTTTSSS-SCCCEETTEECCCCCTTEEE
T ss_pred             CCCCCCcc-cEeEcCCCcEEeEcCCCCEE
Confidence            33456676 78999999999999999965

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.76  E-value=0.00013  Score=39.84  Aligned_cols=40  Identities=30%  Similarity=0.709  Sum_probs=29.0

Q ss_pred             ccCCCCCCCCCCC-Ccee-----ecCCCceeeCCCCcccCCCCCCCc-cCccc
Q psy7854          76 NHHTTENPGICTN-GACE-----NLMGTYRCICNPGYEGDPTGKLCS-DQNEC  121 (153)
Q Consensus        76 ~~~C~~~~~~C~~-~~C~-----~~~g~~~C~C~~g~~~~~~g~~C~-~i~~C  121 (153)
                      .++|..  ++|.| +.|.     +..++|.|.|++||    .|..|+ .+..+
T Consensus         6 c~ec~~--~~C~NgG~C~~~~~~~~~~~y~C~C~~gy----~G~~Ce~~~~~~   52 (63)
T d1haea_           6 CAEKEK--TFCVNGGECFMVKDLSNPSRYLCKCQPGF----TGARCTENVPMK   52 (63)
T ss_dssp             CCHHHH--TTSCTTCEEEEEESSSSSCCEEEECCTTE----ESTTSCEECCSS
T ss_pred             CCCCcC--CcCCCCCEEeecccccCCCCEEeECCCCC----CCCCcCCCCCcc
Confidence            356655  88976 5895     45678999999999    778886 34444

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.47  E-value=0.00054  Score=35.18  Aligned_cols=29  Identities=14%  Similarity=0.103  Sum_probs=22.9

Q ss_pred             CCCCCCC-Ceeeec--CCCcEEecCCCCCccc
Q psy7854         124 DVMICSG-GTCKNT--PGSFQSNFQDSSPILK  152 (153)
Q Consensus       124 ~~~~C~~-~~C~~~--~g~~~C~C~~g~~~~~  152 (153)
                      ..++|.| ++|+..  ..+|.|.|++||.+.+
T Consensus         8 ~~~~C~ngG~C~~~~~~~~~~C~C~~gy~G~~   39 (48)
T d1nqlb_           8 HDGYCLHDGVCMYIEALDKYACNCVVGYIGER   39 (48)
T ss_dssp             TCCEECTTCEEEEETTTTEEEEEECTTEESTT
T ss_pred             CCCCCCCCcEEeeeCCCCCeEEeCCCCcccCC
Confidence            4678887 999763  4579999999998754

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.18  E-value=0.004  Score=32.42  Aligned_cols=30  Identities=40%  Similarity=1.110  Sum_probs=23.9

Q ss_pred             CCCCC-Cceeec--CCCceeeCCCCcccCCCCCCCcc
Q psy7854          84 GICTN-GACENL--MGTYRCICNPGYEGDPTGKLCSD  117 (153)
Q Consensus        84 ~~C~~-~~C~~~--~g~~~C~C~~g~~~~~~g~~C~~  117 (153)
                      ++|.| ++|...  ...|.|.|++||    .|..|+-
T Consensus        12 ~~C~NgG~C~~~~~~~~~~C~C~~gy----~G~~Ce~   44 (53)
T d3egfa_          12 GYCLNGGVCMHIESLDSYTCNCVIGY----SGDRCQT   44 (53)
T ss_dssp             CCSCSSCEEEEESSSSCEEEECCTTC----CSSSSCC
T ss_pred             CCCCCCcEeeccCCCCCeEeECCCCC----cCCCCcc
Confidence            78976 699754  468999999999    7778863

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.71  E-value=0.0048  Score=31.12  Aligned_cols=31  Identities=39%  Similarity=0.832  Sum_probs=24.1

Q ss_pred             CCCCCCceee--cCCCceeeCCCCcccCCCCCCCccC
Q psy7854          84 GICTNGACEN--LMGTYRCICNPGYEGDPTGKLCSDQ  118 (153)
Q Consensus        84 ~~C~~~~C~~--~~g~~~C~C~~g~~~~~~g~~C~~i  118 (153)
                      ++|.||.|..  ....+.|.|++||    .|.+|+-+
T Consensus        12 ~yC~nG~C~~~~~~~~~~C~C~~gY----~G~RCe~~   44 (46)
T d1k36a_          12 GYCLHGQCIYLVDMSQNYCRCEVGY----TGVRCEHF   44 (46)
T ss_dssp             SSCSSEEEEEETTTTEEEEEECTTC----SSTTSCCC
T ss_pred             CcCcCCEEEEeCCCCccEeECCCCc----eecCceee
Confidence            6888888864  4567999999999    66777643

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.55  E-value=0.0056  Score=30.87  Aligned_cols=28  Identities=11%  Similarity=0.081  Sum_probs=21.8

Q ss_pred             CCCCCCCeeee--cCCCcEEecCCCCCccc
Q psy7854         125 VMICSGGTCKN--TPGSFQSNFQDSSPILK  152 (153)
Q Consensus       125 ~~~C~~~~C~~--~~g~~~C~C~~g~~~~~  152 (153)
                      .+.|.|+.|..  ....+.|.|++||.+.|
T Consensus        11 ~~yC~nG~C~~~~~~~~~~C~C~~gY~G~R   40 (46)
T d1k36a_          11 NGYCLHGQCIYLVDMSQNYCRCEVGYTGVR   40 (46)
T ss_dssp             CSSCSSEEEEEETTTTEEEEEECTTCSSTT
T ss_pred             CCcCcCCEEEEeCCCCccEeECCCCceecC
Confidence            47787777753  45679999999998865

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.51  E-value=0.003  Score=32.25  Aligned_cols=29  Identities=38%  Similarity=1.061  Sum_probs=23.2

Q ss_pred             CCCCC-Cceeec--CCCceeeCCCCcccCCCCCCCc
Q psy7854          84 GICTN-GACENL--MGTYRCICNPGYEGDPTGKLCS  116 (153)
Q Consensus        84 ~~C~~-~~C~~~--~g~~~C~C~~g~~~~~~g~~C~  116 (153)
                      ++|.| ++|...  ...|.|.|+.||    .|..|+
T Consensus        10 ~~C~ngG~C~~~~~~~~~~C~C~~gy----~G~~Ce   41 (48)
T d1nqlb_          10 GYCLHDGVCMYIEALDKYACNCVVGY----IGERCQ   41 (48)
T ss_dssp             CEECTTCEEEEETTTTEEEEEECTTE----ESTTSC
T ss_pred             CCCCCCcEEeeeCCCCCeEEeCCCCc----ccCCCC
Confidence            78976 699764  467999999999    677876

>d1dx5i1 g.3.11.1 (I:345-387) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.51  E-value=0.0045  Score=29.95  Aligned_cols=32  Identities=13%  Similarity=0.227  Sum_probs=24.1

Q ss_pred             cCccccCCCCCCCCCeeeec-CCCcEEecCCCCCcc
Q psy7854         117 DQNECLMDVMICSGGTCKNT-PGSFQSNFQDSSPIL  151 (153)
Q Consensus       117 ~i~~C~~~~~~C~~~~C~~~-~g~~~C~C~~g~~~~  151 (153)
                      .+|+|  ....|. .+|... +++|+|+|..||+.+
T Consensus         3 ~vDPC--f~~~CE-~qCqP~~~~~Y~CiCaeGFaP~   35 (43)
T d1dx5i1           3 PVDPC--FRANCE-YQCQPLDQTSYLCVCAEGFAPI   35 (43)
T ss_dssp             CCCGG--GGCCCS-SEEEECSSSCEEEECCTTEEEE
T ss_pred             ccccc--cCCCcc-eeeeeCCCCcceEEeccccccC
Confidence            35677  567777 788764 678999999999743

>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.26  E-value=0.0039  Score=32.98  Aligned_cols=29  Identities=17%  Similarity=0.399  Sum_probs=22.2

Q ss_pred             ccCCCCCCCCCeeeecC-CCcEEecCCCCCc
Q psy7854         121 CLMDVMICSGGTCKNTP-GSFQSNFQDSSPI  150 (153)
Q Consensus       121 C~~~~~~C~~~~C~~~~-g~~~C~C~~g~~~  150 (153)
                      |....+.|. ..|++++ ++|.|.|++||.+
T Consensus         3 C~~~NGgC~-h~C~~~~~~~~~C~C~~Gy~L   32 (57)
T d1rfnb_           3 CNIKNGRCE-QFCKNSADNKVVCSCTEGYRL   32 (57)
T ss_dssp             TTGGGGGCS-SEEEECTTSCEEEECCTTEEE
T ss_pred             cCCCCCCcc-cEeeeCCCCCeEeECCCCCEE
Confidence            433445677 8999986 4799999999975

>d2bz6l1 g.3.11.1 (L:90-142) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.16  E-value=0.0042  Score=32.34  Aligned_cols=26  Identities=12%  Similarity=0.307  Sum_probs=20.5

Q ss_pred             CCCCCCCCeeeecCC-CcEEecCCCCCc
Q psy7854         124 DVMICSGGTCKNTPG-SFQSNFQDSSPI  150 (153)
Q Consensus       124 ~~~~C~~~~C~~~~g-~~~C~C~~g~~~  150 (153)
                      ..+.|. ..|+++++ .|.|.|+.||.+
T Consensus         5 ~NGGC~-h~C~~~~~~~~~C~C~~Gy~L   31 (53)
T d2bz6l1           5 ENGGCE-QYCSDHTGTKRSCRCHEGYSL   31 (53)
T ss_dssp             GGGGCS-SEEEEETTTEEEEECCTTEEE
T ss_pred             CCCCCc-CEeeeCCCCCEEeECCCCCEE
Confidence            345576 88999876 588999999975

>d1dx5i1 g.3.11.1 (I:345-387) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.82  E-value=0.059  Score=25.89  Aligned_cols=32  Identities=25%  Similarity=0.634  Sum_probs=23.4

Q ss_pred             ccCCCCCCCCCCCCceeecC-CCceeeCCCCcccCC
Q psy7854          76 NHHTTENPGICTNGACENLM-GTYRCICNPGYEGDP  110 (153)
Q Consensus        76 ~~~C~~~~~~C~~~~C~~~~-g~~~C~C~~g~~~~~  110 (153)
                      +|.|..  ..|.. .|.... +.|+|+|..||...+
T Consensus         4 vDPCf~--~~CE~-qCqP~~~~~Y~CiCaeGFaP~p   36 (43)
T d1dx5i1           4 VDPCFR--ANCEY-QCQPLDQTSYLCVCAEGFAPIP   36 (43)
T ss_dssp             CCGGGG--CCCSS-EEEECSSSCEEEECCTTEEEET
T ss_pred             cccccC--CCcce-eeeeCCCCcceEEeccccccCC
Confidence            456665  56765 788764 589999999996543

>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Transforming growth factor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.72  E-value=0.043  Score=27.81  Aligned_cols=28  Identities=4%  Similarity=-0.161  Sum_probs=20.2

Q ss_pred             CCCCCC-Ceee-ecCCCcEEecCCCCCccc
Q psy7854         125 VMICSG-GTCK-NTPGSFQSNFQDSSPILK  152 (153)
Q Consensus       125 ~~~C~~-~~C~-~~~g~~~C~C~~g~~~~~  152 (153)
                      .+.|.| +.|. .....+.|.|++||.+.|
T Consensus        12 ~~yClnGgcc~~~~~~~~~C~C~~gy~G~R   41 (49)
T d1moxc_          12 TQFCFHGTCRFLVQEDKPACVCHSGYVGAR   41 (49)
T ss_dssp             SCSSTTEEEEEETTTTEEEEEECTTEESTT
T ss_pred             CCEeeCCeEEecCCCCCcEeECCCCCEecC
Confidence            467777 5553 345668999999998765

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.76  E-value=0.055  Score=27.52  Aligned_cols=28  Identities=4%  Similarity=-0.160  Sum_probs=20.6

Q ss_pred             CCCCCC-Ceee-ecCCCcEEecCCCCCccc
Q psy7854         125 VMICSG-GTCK-NTPGSFQSNFQDSSPILK  152 (153)
Q Consensus       125 ~~~C~~-~~C~-~~~g~~~C~C~~g~~~~~  152 (153)
                      .+.|.| +.|. ...+.+.|.|+.||.+.|
T Consensus        13 ~~yC~nGgcc~~~~~~~~~C~C~~gy~G~r   42 (50)
T d1ioxa_          13 KHYCIKGRCRFVVAEQTPSCVCDEGYIGAR   42 (50)
T ss_dssp             TTSCTTCCEEEETTTTEEEECCCTTEETTT
T ss_pred             CCCccCCeEEEeCCCCCcEeECCCCCeeCC
Confidence            467777 6664 445668999999998765

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.46  E-value=0.082  Score=26.82  Aligned_cols=31  Identities=29%  Similarity=0.634  Sum_probs=22.4

Q ss_pred             CCCCCC-cee-ecCCCceeeCCCCcccCCCCCCCccC
Q psy7854          84 GICTNG-ACE-NLMGTYRCICNPGYEGDPTGKLCSDQ  118 (153)
Q Consensus        84 ~~C~~~-~C~-~~~g~~~C~C~~g~~~~~~g~~C~~i  118 (153)
                      +.|.|+ .|. .....+.|.|+.||    .|..|+-.
T Consensus        14 ~yC~nGgcc~~~~~~~~~C~C~~gy----~G~rCe~~   46 (50)
T d1ioxa_          14 HYCIKGRCRFVVAEQTPSCVCDEGY----IGARCERV   46 (50)
T ss_dssp             TSCTTCCEEEETTTTEEEECCCTTE----ETTTTCEE
T ss_pred             CCccCCeEEEeCCCCCcEeECCCCC----eeCCCccc
Confidence            678777 442 44567899999999    66788644

>d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor, HBEGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heparin-binding epidermal growth factor, HBEGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.01  E-value=0.11  Score=25.10  Aligned_cols=30  Identities=37%  Similarity=1.047  Sum_probs=22.2

Q ss_pred             CCCCCCceee--cCCCceeeCCCCcccCCCCCCCcc
Q psy7854          84 GICTNGACEN--LMGTYRCICNPGYEGDPTGKLCSD  117 (153)
Q Consensus        84 ~~C~~~~C~~--~~g~~~C~C~~g~~~~~~g~~C~~  117 (153)
                      +.|-||.|.-  ....+.|.|..||    .|.+|+.
T Consensus         8 ~yCihG~C~~i~~l~~~~C~C~~gY----~G~RCq~   39 (41)
T d1xdtr_           8 DFCIHGECKYVKELRAPSCICHPGY----HGERCHG   39 (41)
T ss_dssp             TCCSSEEECCBGGGTBCCEEECTTE----ESTTCCE
T ss_pred             CEeECcEEeecCcCCCceeECCCCC----eecCccc
Confidence            5676788854  4567899999999    6667653